-- dump date 20140619_030618 -- class Genbank::CDS -- table cds_note -- id note YP_004260707.1 COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR013317: IPR013159: IPR001957: IPR003593; KEGG: fbc:FB2170_13478 chromosomal replication initiation protein; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_004260708.1 COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: cat:CA2559_12743 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Acid phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight phosphotyrosine protein phosphatase; manually curated; PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_004260709.1 COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: fbc:FB2170_13488 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_004260710.1 KEGG: fbc:FB2170_13493 hypothetical protein; SPTR: uncharacterized protein YP_004260711.1 COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: fbc:FB2170_13498 hypothetical protein; PFAM: Uncharacterised protein family UPF0755; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_004260712.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_13503 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004260713.1 COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: fbc:FB2170_13508 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_004260714.1 COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: fbc:FB2170_13513 heat shock-related protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PRIAM: HtrA2 peptidase; SPTR: heat shock-related protease; PFAM: Trypsin; TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_004260715.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828: IPR020829: IPR006424; KEGG: fbc:FB2170_13518 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_004260716.1 KEGG: fbc:FB2170_13523 hypothetical protein; SPTR: uncharacterized protein YP_004260717.1 InterPro IPR000182; KEGG: fbc:FB2170_13528 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004260718.1 COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR016009: IPR002649; KEGG: fbc:FB2170_13533 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_004260719.1 KEGG: cbl:CLK_0757 type IV leader peptidase; SPTR: Type IV leader peptidase YP_004260720.1 COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: rbi:RB2501_16154 50S ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_004260721.1 COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: fbc:FB2170_13543 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_004260722.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_13553 outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent/ligand-gated channel; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004260723.1 KEGG: fbc:FB2170_13558 hypothetical protein; SPTR: uncharacterized protein YP_004260724.1 KEGG: fbc:FB2170_13563 hypothetical protein; SPTR: uncharacterized protein YP_004260725.1 COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR018111: IPR006674: IPR017705: IPR006675: IPR 004087: IPR003607; KEGG: fbc:FB2170_09191 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD domain; K Homology; SPTR: uncharacterized protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Uncharacterised protein family HDIG; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_004260726.1 KEGG: fbc:FB2170_09186 hypothetical protein; SPTR: uncharacterized protein; PFAM: Cell division protein ZapA YP_004260727.1 KEGG: fbc:FB2170_09181 hypothetical protein; SPTR: uncharacterized protein YP_004260728.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_09176 peptidase; PFAM: Peptidase M23; SPTR: peptidase; PFAM: Peptidase family M23 YP_004260729.1 KEGG: fbc:FB2170_09166 hypothetical protein; SPTR: uncharacterized protein YP_004260730.1 COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: fbc:FB2170_09161 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: cysteine desulfurase; PFAM: Aminotransferase class-V YP_004260731.1 KEGG: rbi:RB2501_11762 hypothetical protein; SPTR: uncharacterized protein YP_004260732.1 KEGG: fbc:FB2170_09151 hypothetical protein; SPTR: uncharacterized protein; PFAM: Smr domain YP_004260733.1 KEGG: fbc:FB2170_09146 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2752) YP_004260734.1 KEGG: fbc:FB2170_09141 hypothetical protein; SPTR: uncharacterized protein YP_004260735.1 KEGG: fbc:FB2170_09136 hypothetical protein; SPTR: uncharacterized protein YP_004260736.1 COGs: COG0514 Superfamily II DNA helicase; InterProIPR011545: IPR001650: IPR018982: IPR002121: IPR 006293: IPR004589: IPR014001; KEGG: fbc:FB2170_00545 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_004260737.1 COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347: IPR000644: IPR004800; KEGG: fbc:FB2170_00550 hypothetical protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SPTR: uncharacterized protein; TIGRFAM: KpsF/GutQ; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_004260738.1 COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033: IPR019822; KEGG: fbc:FB2170_00555 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent protein translocase (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_004260739.1 COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779: IPR004675; KEGG: fjo:Fjoh_0284 alkylhydroperoxidase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_004260740.1 COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_00560 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004260741.1 COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: fbc:FB2170_00565 phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase YP_004260742.1 KEGG: fbc:FB2170_00570 hypothetical protein; SPTR: uncharacterized protein YP_004260743.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_00575 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004260744.1 KEGG: fbc:FB2170_00580 hypothetical protein; SPTR: uncharacterized protein YP_004260745.1 KEGG: fbc:FB2170_00585 hypothetical protein; SPTR: uncharacterized protein YP_004260746.1 KEGG: cat:CA2559_02190 hypothetical protein; SPTR: uncharacterized protein YP_004260747.1 COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: fbc:FB2170_00590 vitamin B12 related cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: vitamin B12 related Cobalamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_004260748.1 KEGG: fbc:FB2170_00595 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2795) YP_004260749.1 COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: SecA protein; InterProIPR011115: IPR011130: IPR001650: IPR011116: IPR 000185; KEGG: fbc:FB2170_00600 translocase; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; Helicase, C-terminal; SecA Wing/Scaffold; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; PFAM: SecA DEAD-like domain; Helicase conserved C-terminal domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_004260751.1 KEGG: fbc:FB2170_11316 hypothetical protein; SPTR: uncharacterized protein YP_004260752.1 KEGG: fbc:FB2170_11306 hypothetical protein; SPTR: uncharacterized protein YP_004260753.1 KEGG: fbc:FB2170_11306 hypothetical protein; SPTR: uncharacterized protein YP_004260754.1 KEGG: fbc:FB2170_11306 hypothetical protein; SPTR: uncharacterized protein YP_004260755.1 InterPro IPR016047; KEGG: fba:FIC_01420 M23/M37 peptidase/aminotransferase, class III; PFAM: Peptidase M23; SPTR: enzyme with aminotransferase class-III domain protein; PFAM: Peptidase family M23 YP_004260756.1 COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: fbc:FB2170_00665 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_004260757.1 KEGG: fbc:FB2170_00685 hypothetical protein; SPTR: uncharacterized protein YP_004260758.1 KEGG: fbc:FB2170_00690 hypothetical protein; SPTR: uncharacterized protein YP_004260759.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_00695 RNA polymerase sigma-E factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004260760.1 KEGG: fbc:FB2170_00705 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2911) YP_004260761.1 COGs: COG1703 periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: fjo:Fjoh_5021 LAO/AO transport system ATPase; PFAM: ArgK protein; SPTR: Arginine/ornithine transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_004260762.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_1219 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2 YP_004260763.1 KEGG: acp:A2cp1_3505 hypothetical protein; SPTR: uncharacterized protein YP_004260764.1 InterPro IPR000326; KEGG: fbc:FB2170_00725 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: uncharacterized protein; PFAM: PAP2 superfamily YP_004260765.1 KEGG: zpr:ZPR_3044 hypothetical protein; SPTR: uncharacterized protein YP_004260766.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_00735 transport protein, multidrug efflux protein; PFAM: Multi antimicrobial extrusion protein; SPTR: transport protein, multidrug efflux protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family YP_004260767.1 COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518: IPR011551; KEGG: cat:CA2559_06710 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_004260768.1 COGs: COG4628 conserved hypothetical protein; InterPro IPR018668; KEGG: sbp:Sbal223_2687 hypothetical protein; PFAM: Protein of unknown function DUF2132; SPTR: uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2132) YP_004260769.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545: IPR001650: IPR014001; KEGG: pwa:Pecwa_2935 ATP-dependent RNA helicase RhlE; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase RhlE; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004260770.1 InterPro IPR001087; KEGG: fbc:FB2170_00800 secreted protein; PFAM: Lipase, GDSL; SPTR: secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase YP_004260771.1 COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882: IPR015883; KEGG: fbc:FB2170_00805 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylhexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2 YP_004260772.1 KEGG: fba:FIC_01557 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: phage head-tail adaptor, , SPP1 family YP_004260773.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: lbf:LBF_4046 receiver protein of a two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain YP_004260774.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR013767: IPR003594; KEGG: fjo:Fjoh_4936 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component hybrid sensor and regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_004260775.1 KEGG: fbc:FB2170_00815 hypothetical protein; SPTR: uncharacterized protein YP_004260776.1 InterPro IPR003409; KEGG: ptm:GSPATT00031312001 hypothetical protein; SMART: MORN motif; SPTR: MORN repeat protein; PFAM: MORN repeat YP_004260777.1 KEGG: str:Sterm_1312 hypothetical protein; SPTR: uncharacterized protein YP_004260778.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR001440: IPR010559: IPR003594: IPR019734; KEGG: cpi:Cpin_6624 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; ATPase-like, ATP-binding domain; SMART: Tetratricopeptide repeat; SPTR: Signal transduction histidine kinase, LytS; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat YP_004260779.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: cpi:Cpin_2656 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004260780.1 KEGG: fbc:FB2170_00815 hypothetical protein; SPTR: uncharacterized protein YP_004260781.1 COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: fbc:FB2170_00820 peptide deformylase; PFAM: Formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: Formylmethionine deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_004260782.1 COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); HAMAP: Resolvase, holliday junction-type, YqgF-like; InterPro IPR005227: IPR006641; KEGG: fbc:FB2170_00825 Holliday junction resolvase-like protein; PFAM: Resolvase, holliday junction-type, YqgF-like; SMART: Resolvase, RNase H-like fold; SPTR: Holliday junction resolvase; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_004260783.1 COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_00830 hypothetical protein; PRIAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; SPTR: uncharacterized protein; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004260784.1 InterPro IPR001173; KEGG: rbi:RB2501_11467 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004260785.1 KEGG: bca:BCE_5388 hypothetical protein; SPTR: uncharacterized protein YP_004260786.1 KEGG: rbi:RB2501_11462 Zn-dependent alcohol dehydrogenase, class III; SPTR: uncharacterized protein; PFAM: Glycosyl transferase family 2 YP_004260787.1 COGs: COG1213 sugar nucleotidyltransferase; KEGG: fbc:FB2170_00850 UDP-N-acetylglucosamine pyrophosphorylase related protein; SPTR: UDP-N-acetylglucosamine pyrophosphorylase related protein YP_004260788.1 COGs: COG1887 glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; InterPro IPR007554: IPR001173; KEGG: fbc:FB2170_00855 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; PFAM: Glycosyl transferase, family 2; CDP-glycerol glycerophosphotransferase; SPTR: CDP-Glycerol:Poly(Glycerophosphate) glycerophosphotransferase; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; Glycosyl transferase family 2 YP_004260789.1 COGs: COG0009 translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: fbc:FB2170_00860 hypothetical protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_004260790.1 COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646: IPR006674: IPR006675; KEGG: fbc:FB2170_00865 polyA polymerase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; PRIAM: tRNA cytidylyltransferase; SPTR: polyA polymerase; TIGRFAM: Uncharacterised protein family HDIG; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG YP_004260791.1 InterPro IPR001434: IPR011123; KEGG: swd:Swoo_0477 outer membrane adhesin like protein; PFAM: Domain of unknown function DUF11; Two component regulator three Y; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF11 YP_004260792.1 InterPro IPR019861; KEGG: fbc:FB2170_16156 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004260793.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: cat:CA2559_13643 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004260794.1 InterPro IPR001647; KEGG: cat:CA2559_05345 transcriptional regulator, TetR family protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, tetR family protein; PFAM: Bacterial regulatory proteins, tetR family YP_004260795.1 COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: gfo:GFO_2284 cytochrome oxidase assembly protein; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; SPTR: Cytochrome oxidase assembly protein; PFAM: Cytochrome oxidase assembly protein YP_004260796.1 KEGG: fbc:FB2170_00875 hypothetical protein; SPTR: uncharacterized protein; PFAM: Plasmid pRiA4b ORF-3-like protein YP_004260797.1 KEGG: fbc:FB2170_00880 hypothetical protein; SPTR: uncharacterized protein YP_004260798.1 KEGG: fbc:FB2170_00885 hypothetical protein; SPTR: uncharacterized protein YP_004260799.1 InterPro IPR001434; KEGG: fba:FIC_02206 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain YP_004260800.1 InterPro IPR001434; KEGG: phe:Phep_0107 conserved repeat domain protein; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat; TIGRFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain YP_004260801.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_00890 hypothetical protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; PFAM: ABC transporter YP_004260802.1 KEGG: rbi:RB2501_11422 hypothetical protein; SPTR: uncharacterized protein YP_004260803.1 KEGG: rbi:RB2501_09815 hypothetical protein; SPTR: uncharacterized protein YP_004260804.1 KEGG: fbc:FB2170_00900 hypothetical protein; SPTR: uncharacterized protein YP_004260806.1 COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR006935: IPR001650: IPR001943: IPR004807: IPR 014001; KEGG: fbc:FB2170_00910 excinuclease ABC subunit B; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_004260807.1 COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00915 heat-shock related protein; PFAM: Heat shock protein Hsp20; SPTR: heat-shock related protein; PFAM: Hsp20/alpha crystallin family YP_004260808.1 KEGG: fbc:FB2170_00920 hypothetical protein; SPTR: uncharacterized protein YP_004260809.1 COGs: COG4807 conserved hypothetical protein; InterPro IPR009921; KEGG: fbc:FB2170_00930 hypothetical protein; PFAM: Domain of unknown function DUF1456; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1456) YP_004260810.1 COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; InterPro IPR013650: IPR005811: IPR005809; KEGG: fbc:FB2170_00940 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_004260811.1 COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644: IPR022643: IPR002986; KEGG: fbc:FB2170_00950 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_004260812.1 KEGG: zpr:ZPR_1415 hypothetical protein; SPTR: uncharacterized protein YP_004260813.1 COGs: COG2143 Thioredoxin-related protein; InterPro IPR004879; KEGG: fbc:FB2170_00955 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF255 YP_004260814.1 KEGG: cat:CA2559_10383 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3124) YP_004260815.1 COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657: IPR004706; KEGG: fbc:FB2170_10566 hypothetical protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenite resistance protein ArsB; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_004260816.1 KEGG: fjo:Fjoh_4421 protein tyrosine phosphatase; SPTR: Probable arsenate reductase YP_004260817.1 COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: rbi:RB2501_05060 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004260818.1 KEGG: cat:CA2559_00480 hypothetical protein; SPTR: uncharacterized protein YP_004260819.1 InterPro IPR001845; KEGG: cat:CA2559_00475 transcriptional regulator, ArsR family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein; PFAM: Bacterial regulatory protein, arsR family YP_004260820.1 COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093: IPR000644: IPR005990; KEGG: fbc:FB2170_00960 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_004260821.1 KEGG: aas:Aasi_1414 hypothetical protein; SPTR: uncharacterized protein YP_004260822.1 KEGG: fbc:FB2170_00965 hypothetical protein; SPTR: uncharacterized protein YP_004260823.1 COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_08506 outer membrane receptor protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Iron(III) dicitrate transport protein, outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004260824.1 InterPro IPR007782: IPR011020; KEGG: gfo:GFO_2513 vitamin K-dependent gamma-carboxylase; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM; SPTR: Gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase YP_004260825.1 InterPro IPR018976; KEGG: cat:CA2559_08516 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: uncharacterized protein; PFAM: Imelysin YP_004260826.1 KEGG: zpr:ZPR_4263 hypothetical protein; SPTR: uncharacterized protein YP_004260827.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fbc:FB2170_00980 hydroxymethylglutaryl-CoA lyase like protein; PFAM: Pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; PFAM: HMGL-like YP_004260828.1 COGs: COG1280 threonine efflux protein; InterPro IPR001123; KEGG: fbc:FB2170_00985 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator YP_004260829.1 InterPro IPR013097; KEGG: fbc:FB2170_00990 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain YP_004260830.1 COGs: COG0167 Dihydroorotate dehydrogenase; HAMAP: Dihydroorotate dehydrogenase, class 2; InterPro IPR012135: IPR005719; KEGG: fbc:FB2170_00995 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 2; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_004260831.1 COGs: COG2195 Di- and tripeptidase; HAMAP: Peptidase M20B, tripeptide aminopeptidase; InterPro IPR002933: IPR011650: IPR010161; KEGG: fbc:FB2170_01005 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Peptidase T; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T YP_004260832.1 COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: rbi:RB2501_11317 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DU1801) YP_004260833.1 COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: fbc:FB2170_01020 YajC; PFAM: Preprotein translocase YajC; SPTR: YajC; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_004260834.1 InterPro IPR011467; KEGG: fbc:FB2170_01025 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1573) YP_004260835.1 COGs: COG0781 Transcription termination factor; InterPro IPR006027; KEGG: fbc:FB2170_01030 N utilization substance protein; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_004260836.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: fbc:FB2170_01035 ABC transporter, ATP-binding protein, MDR family; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MDR family; PFAM: ABC transporter transmembrane region; ABC transporter YP_004260837.1 InterPro IPR006628; KEGG: fbc:FB2170_01040 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3276) YP_004260838.1 InterPro IPR000834; KEGG: fbc:FB2170_01045 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase YP_004260839.1 COGs: COG0073 EMAP domain; InterPro IPR002547: IPR008231; KEGG: fbc:FB2170_01060 t-RNA-binding region; PFAM: tRNA-binding domain; SPTR: T-RNA-binding region; TIGRFAM: Secretion chaperone CsaA; PFAM: tRNA binding domain; TIGRFAM: export-related chaperone CsaA YP_004260840.1 InterPro IPR000866; KEGG: fbc:FB2170_01065 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: uncharacterized protein; PFAM: AhpC/TSA family YP_004260841.1 HAMAP: metal-dependent hydrolase; KEGG: fbc:FB2170_01070 hypothetical protein; SPTR: uncharacterized protein YP_004260842.1 COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR001179; KEGG: fbc:FB2170_01095 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_004260843.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_01100 peptidase, M28D family protein; PFAM: Peptidase M28; SPTR: Peptidase, M28D family protein; PFAM: PA domain; Peptidase family M28 YP_004260844.1 COGs: COG2326 conserved hypothetical protein; InterPro IPR022488: IPR022300; KEGG: fbc:FB2170_01105 hypothetical protein; PFAM: Polyphosphate kinase-2-related; SPTR: uncharacterized protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family YP_004260845.1 KEGG: fbc:FB2170_01110 hypothetical protein; SPTR: uncharacterized protein YP_004260846.1 KEGG: rbi:RB2501_00146 hypothetical protein; SPTR: uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport YP_004260847.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_13718 SpoU protein; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: SpoU protein; PFAM: SpoU rRNA Methylase family YP_004260848.1 COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: fbc:FB2170_13723 hypothetical protein; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Sir2 family protein; PFAM: Sir2 family YP_004260849.1 KEGG: fbc:FB2170_13728 hypothetical protein; SPTR: uncharacterized protein YP_004260850.1 KEGG: fbc:FB2170_13733 adenylosuccinate lyase; SPTR: Adenylosuccinate lyase YP_004260851.1 COGs: COG0015 Adenylosuccinate lyase; InterPro IPR022761: IPR013539: IPR004769; KEGG: cat:CA2559_06215 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal/plant; Lyase 1, N-terminal; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_004260852.1 COGs: COG2356 Endonuclease I; InterPro IPR007346: IPR003961: IPR005135; KEGG: fba:FIC_01152 hypothetical protein; PFAM: Endonuclease I; Fibronectin, type III; Endonuclease/exonuclease/phosphatase; SMART: Fibronectin, type III; SPTR: Endonuclease I; PFAM: Endonuclease/Exonuclease/phosphatase family; Endonuclease I; Fibronectin type III domain YP_004260853.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR008910: IPR006685; KEGG: fbc:FB2170_13748 mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel MscS; Conserved TM helix; SPTR: Mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel; Conserved TM helix YP_004260854.1 KEGG: fbc:FB2170_13753 hypothetical protein; SPTR: uncharacterized protein YP_004260855.1 KEGG: fbc:FB2170_13763 hypothetical protein; SPTR: uncharacterized protein YP_004260856.1 KEGG: fbc:FB2170_13768 hypothetical protein; SPTR: uncharacterized protein YP_004260857.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_13773 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004260858.1 COGs: COG0793 Periplasmic protease; InterPro IPR005151: IPR001478; KEGG: fjo:Fjoh_0093 peptidase S41; PFAM: Peptidase S41; SMART: PDZ/DHR/GLGF; SPTR: Peptidase S41, subfamily S41A unassigned peptidases; PFAM: Peptidase family S41 YP_004260859.1 COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_13783 TonB-dependent receptor, PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor, ; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004260860.1 COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: fbc:FB2170_13793 periplasmic-binding protein of ABC transporter; PFAM: Periplasmic binding protein; SPTR: Periplasmic-binding protein of ABC transporter; PFAM: Periplasmic binding protein YP_004260861.1 COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: fbc:FB2170_13798 permease of iron(III) ABC transporter; PFAM: ABC transporter permease; SPTR: Permease of iron(III) ABC transporter; PFAM: FecCD transport family YP_004260862.1 COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: gfo:GFO_1082 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; manually curated; PFAM: ABC transporter YP_004260863.1 COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: fbc:FB2170_13808 hypothetical protein; PFAM: DNA recombination RmuC; SPTR: uncharacterized protein; PFAM: RmuC family YP_004260864.1 KEGG: fbc:FB2170_13813 6-phosphogluconate dehydrogenase; SPTR: 6-phosphogluconate dehydrogenase YP_004260865.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: gfo:GFO_1078 acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; SPTR: Acyl CoA thioester hydrolase; PFAM: Thioesterase superfamily YP_004260866.1 KEGG: ter:Tery_1611 threonine-phosphate decarboxylase; SPTR: Histidine Kinase YP_004260867.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559: IPR019734; KEGG: fjo:Fjoh_3977 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Tetratricopeptide TPR_2; PFAM: Histidine kinase YP_004260868.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fjo:Fjoh_3976 LytTR family two component transcriptional regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Response regulator of the LytR/AlgR family, ; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004260869.1 KEGG: cpi:Cpin_6420 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1266) YP_004260870.1 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR005481: IPR005479: IPR005480: IPR006275; KEGG: fbc:FB2170_13823 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_004260871.1 HAMAP: Ribosomal protein L34; InterPro IPR000271; KEGG: cat:CA2559_12828 hypothetical protein; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_004260872.1 KEGG: rbi:RB2501_00281 cardiolipin synthetase; SPTR: Cardiolipin synthetase YP_004260873.1 KEGG: fbc:FB2170_13833 hypothetical protein; SPTR: uncharacterized protein YP_004260874.1 InterPro IPR008258; KEGG: fbc:FB2170_13838 membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: membrane-bound lytic murein transglycosylase; PFAM: Transglycosylase SLT domain YP_004260875.1 KEGG: fbc:FB2170_13843 hypothetical protein; SPTR: uncharacterized protein YP_004260876.1 KEGG: fbc:FB2170_13848 hypothetical protein; SPTR: uncharacterized protein YP_004260877.1 COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848: IPR007197: IPR005839: IPR006467: IPR 006638; KEGG: fjo:Fjoh_5039 MiaB-like tRNA modifying enzyme; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family YP_004260878.1 COGs: COG0259 Pyridoxamine-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; InterPro IPR011576: IPR019576: IPR000659; KEGG: fbc:FB2170_15223 pyridoxamine 5-phosphate oxidase; PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase YP_004260879.1 InterPro IPR000620; KEGG: fjo:Fjoh_2366 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Drug/metabolite transporter (DMT) superfamily protein; PFAM: EamA-like transporter family YP_004260880.1 COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR001279: IPR013471; KEGG: fbc:FB2170_15228 ribonuclease Z; PFAM: Beta-lactamase-like; SPTR: Ribonuclease Z; TIGRFAM: Ribonuclease Z; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z YP_004260881.1 KEGG: fbc:FB2170_15233 hypothetical protein; SPTR: uncharacterized protein YP_004260882.1 COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase, eukaryotic; InterPro IPR006132: IPR006131: IPR002082; KEGG: fbc:FB2170_15238 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_004260883.1 COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_15243 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyl transferase domain YP_004260884.1 COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR022967; KEGG: fbc:FB2170_15288 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: 30S ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_004260885.1 InterPro IPR018392: IPR002482; KEGG: fbc:FB2170_15293 peptidoglycan-binding, LysM family protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding, LysM family protein; PFAM: LysM domain YP_004260886.1 COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR000623: IPR011994: IPR003136; KEGG: fbc:FB2170_15298 cytidylate kinase; PFAM: Cytidylate kinase domain; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; PFAM: Cytidylate kinase; Shikimate kinase; TIGRFAM: cytidylate kinase YP_004260887.1 COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111: IPR003959: IPR008269: IPR004815: IPR 003593; KEGG: fbc:FB2170_15303 ATP-dependent protease; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_004260888.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_15308 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004260889.1 KEGG: fbc:FB2170_15313 hypothetical protein; SPTR: uncharacterized protein YP_004260890.1 KEGG: fbc:FB2170_15318 hypothetical protein; SPTR: uncharacterized protein YP_004260891.1 KEGG: fbc:FB2170_15323 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2807) YP_004260892.1 COGs: COG2270 Permease of the major facilitator superfamily; KEGG: fbc:FB2170_15328 hypothetical protein; SPTR: uncharacterized protein; PFAM: Vacuole effluxer Atg22 like YP_004260893.1 COGs: COG4783 Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_15333 hypothetical protein; PFAM: Peptidase M48; SPTR: uncharacterized protein; PFAM: Peptidase family M48 YP_004260894.1 KEGG: fbc:FB2170_15348 hypothetical protein; SPTR: uncharacterized protein YP_004260895.1 COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: fbc:FB2170_15353 methionine sulfoxide reductase B; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine sulfoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_004260896.1 COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: zpr:ZPR_1876 peptide methionine sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_004260897.1 InterPro IPR011466; KEGG: fbc:FB2170_15358 hypothetical protein; PFAM: Protein of unknown function DUF1572; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1572) YP_004260898.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: fbc:FB2170_03000 secreted hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: secreted hydrolase; PFAM: Metallo-beta-lactamase superfamily YP_004260899.1 COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR006258; KEGG: rbi:RB2501_12642 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_004260900.1 KEGG: fbc:FB2170_15373 hypothetical protein; SPTR: uncharacterized protein YP_004260901.1 COGs: COG2102 ATPase of PP-loop superfamily; InterPro IPR002761; KEGG: gfo:GFO_1866 ATP-binding domain-containing protein; PFAM: Domain of unknown function DUF71, ATP-binding domain; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF71, ATP-binding domain; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain YP_004260902.1 COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874; KEGG: fbc:FB2170_15453 3-dehydroquinate dehydratase; PFAM: Dehydroquinase, class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase; TIGRFAM: Dehydroquinase, class II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_004260903.1 KEGG: gfo:GFO_1871 secreted protein; SPTR: uncharacterized protein YP_004260904.1 KEGG: bfs:BF3160 hypothetical protein; SPTR: uncharacterized protein YP_004260905.1 COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107: IPR002104; KEGG: fbc:FB2170_15478 tyrosine recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: tyrosine recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_004260906.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_15493 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004260907.1 KEGG: fbc:FB2170_15498 hypothetical protein; SPTR: uncharacterized protein YP_004260908.1 InterPro IPR002123; KEGG: fbc:FB2170_15503 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: uncharacterized protein; PFAM: Acyltransferase YP_004260909.1 InterPro IPR000086; KEGG: fbc:FB2170_15508 hydrolase, NUDIX family protein; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase, NUDIX family protein; manually curated; PFAM: NUDIX domain YP_004260910.1 COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: fbc:FB2170_15513 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_004260911.1 COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: fbc:FB2170_15518 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: uncharacterized protein; PFAM: UPF0126 domain YP_004260912.1 COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: fbc:FB2170_15523 transmembrane protein; PFAM: RDD; SPTR: transmembrane protein; PFAM: RDD family YP_004260913.1 COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: fbc:FB2170_15528 hypothetical protein; PFAM: Protein of unknown function DUF95, transmembrane; SPTR: uncharacterized protein; PFAM: Integral membrane protein DUF95 YP_004260914.1 KEGG: fbc:FB2170_15533 hypothetical membrane spanning protein; SPTR: Hypothetical membrane spanning protein; PFAM: Uncharacterised protein family (UPF0259) YP_004260915.1 KEGG: fbc:FB2170_15538 hypothetical protein; SPTR: uncharacterized protein YP_004260916.1 KEGG: fbc:FB2170_15543 hypothetical protein; SPTR: uncharacterized protein YP_004260917.1 COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_15548 magnesium chelatase subunit I; PFAM: ATPase, AAA-3; SPTR: Magnesium chelatase subunit I; PFAM: ATPase family associated with various cellular activities (AAA) YP_004260918.1 COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_15553 transmembrane protein; PFAM: Domain of unknown function DUF58; SPTR: transmembrane protein; PFAM: Protein of unknown function DUF58 YP_004260919.1 KEGG: fbc:FB2170_15723 hypothetical protein; SPTR: uncharacterized protein YP_004260920.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003661: IPR003594; KEGG: cpi:Cpin_4970 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004260921.1 InterPro IPR001789; KEGG: cpi:Cpin_4971 response regulator receiver and unknown domain protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain YP_004260922.1 COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: gfo:GFO_0479 ABC-type transporter periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: ABC-type transporter periplasmic binding protein; PFAM: Periplasmic binding protein YP_004260923.1 COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_15808 dioxygenase; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: dioxygenase; PFAM: 2-nitropropane dioxygenase; TIGRFAM: enoyl-ACP reductase II YP_004260924.1 COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506; KEGG: fbc:FB2170_15813 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA-specific 2-thiouridylase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004260925.1 COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; InterPro IPR001708: IPR019998; KEGG: fbc:FB2170_15836 inner membrane protein translocase component YidC; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_004260926.1 COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR017456: IPR000991: IPR004468; KEGG: fbc:FB2170_15841 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_004260927.1 COGs: COG3530 conserved hypothetical protein; KEGG: fbc:FB2170_15846 hypothetical protein; SPTR: uncharacterized protein YP_004260928.1 InterPro IPR003367; KEGG: hau:Haur_2819 AAA ATPase containing von Willebrand factor type A (vWA) protein-like omain; PFAM: Thrombospondin, type 3-like repeat; SPTR: Possible TPR repeat-containing protein YP_004260929.1 KEGG: fbc:FB2170_15856 hypothetical protein; SPTR: uncharacterized protein YP_004260930.1 InterPro IPR018392: IPR002482; KEGG: fbc:FB2170_15861 LysM-repeat protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM-repeat protein; PFAM: Receptor family ligand binding region; LysM domain YP_004260931.1 COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase; InterProIPR000991: IPR004506: IPR001674: IPR004739: IPR 022955; KEGG: fps:FP1894 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA-specific 2-thiouridylase; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_004260932.1 COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: fbc:FB2170_15886 L-2,4-diaminobutyrate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Diaminobutyrate decarboxylase; SPTR: L-2,4-diaminobutyrate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_004260933.1 COGs: COG4365 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0747; InterPro IPR011199; KEGG: fbc:FB2170_15891 hypothetical protein; PFAM: Uncharacterised protein family UPF0747; SPTR: UPF0747 protein FB2170_15891; PFAM: Uncharacterized protein conserved in bacteria (DUF2317) YP_004260934.1 KEGG: fbc:FB2170_00540 hypothetical protein; SPTR: uncharacterized protein YP_004260935.1 COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: pat:Patl_4176 peptidase U61, LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: Peptidase U61 LD-carboxypeptidase A; PFAM: LD-carboxypeptidase YP_004260936.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814: IPR010164; KEGG: fps:FP0739 ornithine--oxo-acid transaminase; PFAM: Aminotransferase class-III; PRIAM: Ornithine aminotransferase; SPTR: Acetylornithine aminotransferase, ; TIGRFAM: Ornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase YP_004260937.1 COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280: IPR001566; KEGG: fbc:FB2170_09116 RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_004260938.1 KEGG: fbc:FB2170_09111 hypothetical protein; SPTR: uncharacterized protein YP_004260939.1 KEGG: fbc:FB2170_09106 hypothetical protein; SPTR: uncharacterized protein YP_004260940.1 COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114: IPR000241; KEGG: fbc:FB2170_09096 methylase; PFAM: RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SMART: THUMP; SPTR: methylase; PFAM: RNA methylase family UPF0020; THUMP domain YP_004260941.1 InterPro IPR003689; KEGG: fbc:FB2170_09091 hypothetical protein; PFAM: Zinc/iron permease; SPTR: uncharacterized protein; PFAM: ZIP Zinc transporter YP_004260942.1 KEGG: fbc:FB2170_09086 hypothetical protein; SPTR: uncharacterized protein YP_004260943.1 COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254: IPR005744; KEGG: fbc:FB2170_09016 hemolysin; PFAM: Hly-III-related; SPTR: Hemolysin; TIGRFAM: HylII; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_004260944.1 InterPro IPR011123; KEGG: fbc:FB2170_09806 von Willebrand factor, type A; PFAM: Two component regulator three Y; SPTR: von Willebrand factor, type A YP_004260945.1 COGs: COG2103 sugar phosphate isomerase; HAMAP: N-acetylmuramic acid 6-phosphate etherase; InterPro IPR001347: IPR005488; KEGG: fbc:FB2170_09791 hypothetical protein; PFAM: Sugar isomerase (SIS); SPTR: uncharacterized protein; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_004260946.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: fbc:FB2170_09766 glycosyl hydrolase, family 3; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Glycosyl hydrolase, family 3; PFAM: Glycosyl hydrolase family 3 N terminal domain YP_004260947.1 COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fbc:FB2170_09751 hypothetical protein; PFAM: Anhydro-N-acetylmuramic acid kinase; SPTR: uncharacterized protein; PFAM: Uncharacterised protein family (UPF0075) YP_004260948.1 InterPro IPR011701: IPR004812; KEGG: fbc:FB2170_09721 bicyclomycin resistance protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Bicyclomycin resistance protein; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_004260949.1 COGs: COG0572 Uridine kinase; InterPro IPR006083: IPR000764; KEGG: fbc:FB2170_09646 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; PRIAM: Uridine kinase; SPTR: Uridine kinase; TIGRFAM: Uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase YP_004260950.1 InterPro IPR007060; KEGG: fbc:FB2170_09641 uridine kinase; PFAM: Septum formation initiator; SPTR: Uridine kinase; PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL YP_004260951.1 COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099; KEGG: fbc:FB2170_09636 methylmalonyl-CoA mutase small subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase small subunit; PFAM: Methylmalonyl-CoA mutase YP_004260952.1 COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099: IPR006158: IPR006098: IPR006159; KEGG: gfo:GFO_0809 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_004260953.1 COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: fbc:FB2170_09631 SpoOJ regulator protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: SpoOJ regulator protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_004260954.1 COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: fbc:FB2170_09626 chromosome partitioning protein ParB; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: chromosome partitioning protein parB; TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_004260955.1 KEGG: fbc:FB2170_09621 hypothetical protein; SPTR: uncharacterized protein YP_004260956.1 COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846: IPR022663: IPR011770; KEGG: fbc:FB2170_09616 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_004260957.1 COGs: COG0681 Signal peptidase I; InterPro IPR019759: IPR000223; KEGG: fbc:FB2170_09611 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_004260958.1 InterPro IPR014985; KEGG: fbc:FB2170_09606 hypothetical protein; PFAM: WbqC-like protein family; SPTR: uncharacterized protein; PFAM: WbqC-like protein family YP_004260959.1 KEGG: fbc:FB2170_09601 hypothetical protein; SPTR: uncharacterized protein YP_004260960.1 COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_09596 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; manually curated; PFAM: Endonuclease/Exonuclease/phosphatase family YP_004260961.1 COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09591 transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: transmembrane rhomboid family protein; PFAM: Rhomboid family YP_004260962.1 COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09586 transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: transmembrane rhomboid family protein; PFAM: Rhomboid family YP_004260963.1 COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein, MutL; InterProIPR003594: IPR013507: IPR014790: IPR014763: IPR 020667; KEGG: fbc:FB2170_09581 DNA mismatch repair protein; PFAM: DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; MutL, C-terminal, dimerisation; SMART: MutL, C-terminal, dimerisation; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_004260964.1 KEGG: rbi:RB2501_01665 riboflavin synthase subunit beta; SPTR: Riboflavin synthase subunit beta YP_004260965.1 COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: fbc:FB2170_09571 riboflavin synthase subunit beta; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_004260966.1 InterPro IPR001440: IPR013105: IPR019734; KEGG: fbc:FB2170_09566 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: uncharacterized protein; PFAM: Tetratricopeptide repeat YP_004260967.1 COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA-binding, RecF; InterPro IPR003395: IPR001238; KEGG: fbc:FB2170_09561 DNA replication and repair protein RecF, ABC family ATPase; PFAM: RecF/RecN/SMC; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_004260968.1 KEGG: fbc:FB2170_09556 hypothetical protein; SPTR: uncharacterized protein YP_004260969.1 InterPro IPR007922; KEGG: fbc:FB2170_09551 hypothetical protein; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF721) YP_004260970.1 COGs: COG0105 Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: fbc:FB2170_09546 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase YP_004260971.1 COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: nve:NEMVE_v1g63622 hypothetical protein; SPTR: uncharacterized protein; PFAM: PhoD-like phosphatase YP_004260972.1 COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: fbc:FB2170_09541 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: uncharacterized protein; PFAM: DHH family; DHHA1 domain YP_004260973.1 InterPro IPR001179: IPR019869; KEGG: fbc:FB2170_09536 peptidyl-prolylisomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: peptidyl-prolylisomerase; TIGRFAM: Gliding motility-associated, peptidyl-prolyl isomerase, GldI; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated YP_004260974.1 COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR001179; KEGG: rbi:RB2501_01720 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_004260975.1 InterPro IPR001547; KEGG: chu:CHU_2103 endoglucanase; PFAM: Glycoside hydrolase, family 5; PRIAM: Cellulase; SPTR: Endoglucanase, glycoside hydrolase family 5 protein; PFAM: Cellulase (glycosyl hydrolase family 5) YP_004260976.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR002933: IPR011650: IPR001160; KEGG: fbc:FB2170_09521 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase YP_004260977.1 KEGG: fbc:FB2170_09516 hypothetical protein; SPTR: uncharacterized protein YP_004260978.1 COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_09511 secreted enzyme; PFAM: Amidohydrolase 1; SPTR: Secreted enzyme; PFAM: Amidohydrolase family YP_004260979.1 COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: fbc:FB2170_09506 predicted amidohydrolase; PFAM: Amidohydrolase 3; SPTR: Predicted amidohydrolase; PFAM: Amidohydrolase family YP_004260980.1 KEGG: rbi:RB2501_03395 hypothetical protein; SPTR: uncharacterized protein YP_004260981.1 COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537; KEGG: fbc:FB2170_09336 rRNA methylase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: 23S rRNA methyltransferase; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding YP_004260982.1 COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: fbc:FB2170_09331 STE24 endopeptidase; PFAM: Peptidase M48; PRIAM: Ste24 endopeptidase; SPTR: Ste24 endopeptidase; PFAM: Peptidase family M48 YP_004260983.1 COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674: IPR007685: IPR004095: IPR004811: IPR 003607; KEGG: fbc:FB2170_09326 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; PRIAM: GTP diphosphokinase; SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_004260984.1 COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fbc:FB2170_09321 ferric uptake regulation protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein; PFAM: Ferric uptake regulator family YP_004260985.1 COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: cat:CA2559_08766 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_004260986.1 KEGG: fbc:FB2170_09271 hypothetical protein; SPTR: uncharacterized protein YP_004260987.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_09266 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; PFAM: Aminotransferase class-III YP_004260988.1 InterPro IPR001440: IPR019734; KEGG: fbc:FB2170_09261 TPR repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein; PFAM: Tetratricopeptide repeat YP_004260989.1 COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: gfo:GFO_0769 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Membrane protein containing DUF368; PFAM: Domain of unknown function (DUF368) YP_004260990.1 COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: fbc:FB2170_09251 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF368) YP_004260991.1 COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708: IPR006151; KEGG: fbc:FB2170_09246 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase YP_004260992.1 COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR004450; KEGG: fbc:FB2170_15128 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_004260993.1 COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: gfo:GFO_1930 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; PFAM: NmrA-like family YP_004260994.1 COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR006222: IPR013977: IPR006223: IPR022903; KEGG: fbc:FB2170_15133 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein YP_004260995.1 COGs: COG2066 Glutaminase; HAMAP: Glutaminase; InterPro IPR015868; KEGG: cat:CA2559_09673 glutaminase; PFAM: Glutaminase; PRIAM: Glutaminase; SPTR: Glutaminase; TIGRFAM: Glutaminase; PFAM: Glutaminase; TIGRFAM: glutaminase A YP_004260996.1 COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001509; KEGG: fbc:FB2170_15138 NAD dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase; PFAM: RmlD substrate binding domain YP_004260997.1 COGs: COG2154 Pterin-4a-carbinolamine dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; InterPro IPR001533; KEGG: rbi:RB2501_12919 pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; SPTR: pterin-4-alpha-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase YP_004260998.1 COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: lby:Lbys_2571 na+-dependent transporter-like protein; PFAM: Bile acid:sodium symporter; SPTR: Possible lipoprotein transmembrane protein; PFAM: Sodium Bile acid symporter family YP_004260999.1 COGs: COG0708 Exonuclease III; InterPro IPR005135: IPR000097: IPR004808; KEGG: cst:CLOST_2026 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_004261000.1 InterPro IPR006626; KEGG: sde:Sde_3285 TonB-dependent receptor; PRIAM: Poly(beta-D-mannuronate) lyase; SPTR: alginate lyase YP_004261001.1 InterPro IPR012480; KEGG: cat:CA2559_11508 chondroitin AC/alginate lyase; PFAM: Heparinase II/III-like; SPTR: Heparinase II/III-like protein; PFAM: Heparinase II/III-like protein YP_004261002.1 InterPro IPR012910; KEGG: gfo:GFO_1153 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; SPTR: outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261003.1 InterPro IPR012944; KEGG: cat:CA2559_11493 outer membrane protein; PFAM: RagB/SusD; SPTR: outer membrane protein, probably involved in nutrient binding; PFAM: SusD family YP_004261004.1 InterPro IPR000601: IPR022409; KEGG: gfo:GFO_1155 PKD domain-containing protein; PFAM: PKD domain; SMART: PKD/Chitinase domain; SPTR: Protein containing PKD domain; PFAM: PKD domain YP_004261005.1 InterPro IPR014895; KEGG: cat:CA2559_11483 hypothetical protein; PFAM: Alginate lyase 2; SPTR: uncharacterized protein; PFAM: Alginate lyase YP_004261006.1 COGs: COG2186 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: cat:CA2559_11478 transcriptional regulator, GntR family protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; SPTR: Regulatory protein GntR, HTH; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_004261007.1 COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: pat:Patl_3658 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Hexuranate transporter; PFAM: Major Facilitator Superfamily YP_004261008.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cat:CA2559_11468 acetoin(diacetyl)reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase YP_004261009.1 KEGG: fbc:FB2170_13568 hypothetical protein; SPTR: uncharacterized protein YP_004261010.1 COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: fbc:FB2170_13578 endoglucanase, PFAM: Peptidase M42; PRIAM: Cellulase; SPTR: Endoglucanase, ; PFAM: M42 glutamyl aminopeptidase YP_004261011.1 COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR000086; KEGG: fbc:FB2170_13583 hydrolase of MutT (NUDIX) family protein; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase of MutT (Nudix) family protein; PFAM: NUDIX domain YP_004261012.1 COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR002314: IPR004154: IPR015807; KEGG: zpr:ZPR_2125 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_004261013.1 KEGG: fbc:FB2170_13593 hypothetical protein; SPTR: uncharacterized protein YP_004261014.1 InterPro IPR012910; KEGG: gfo:GFO_0462 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: TonB dependent/ligand-gated channel YP_004261015.1 COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020070: IPR020069: IPR020594; KEGG: fbc:FB2170_13598 50S ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_004261016.1 COGs: COG0238 Ribosomal protein S18; HAMAP: Ribosomal protein S18; InterPro IPR001648; KEGG: fbc:FB2170_13603 ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_004261017.1 COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; InterPro IPR000529: IPR020814; KEGG: fbc:FB2170_13608 30S ribosomal protein S6; PFAM: Ribosomal protein S6; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_004261018.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_13613 two-component system response regulator protein; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004261019.1 COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR011545: IPR001650: IPR014001: IPR005259; KEGG: fbc:FB2170_13618 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Primosomal protein N'; TIGRFAM: Primosomal protein n; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_004261020.1 InterPro IPR019223; KEGG: fbc:FB2170_13623 hypothetical protein; PFAM: Protein of unknown function DUF2147; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_004261021.1 COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: fbc:FB2170_13628 ribonuclease BN; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_004261022.1 COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR022412: IPR002638: IPR004393; KEGG: fbc:FB2170_13633 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: nicotinate-nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_004261023.1 COGs: COG1576 conserved hypothetical protein; HAMAP: SPOUT methyltransferase, predicted; InterPro IPR003742; KEGG: fbc:FB2170_13638 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_004261024.1 InterPro IPR013766; KEGG: zpr:ZPR_4585 hypothetical protein; PFAM: Thioredoxin domain; SPTR: uncharacterized protein; PFAM: AhpC/TSA family YP_004261025.1 KEGG: cbf:CLI_0850 botulinum neurotoxin type A1 nontoxic-nonhemagglutinin subunit; SPTR: uncharacterized protein YP_004261026.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140: IPR002912; KEGG: fbc:FB2170_13643 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; D-3-phosphoglycerate dehydrogenase YP_004261027.1 COGs: COG2020 protein-S-isoprenylcysteine methyltransferase; KEGG: fbc:FB2170_13673 hypothetical protein; SPTR: uncharacterized protein; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_004261028.1 COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase; InterPro IPR002637: IPR020922; KEGG: fjo:Fjoh_2403 deoxyribonucleoside-triphosphatase; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_004261029.1 KEGG: fbc:FB2170_13683 hypothetical protein; SPTR: uncharacterized protein YP_004261030.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545: IPR001650: IPR014001; KEGG: fbc:FB2170_13688 ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_004261031.1 KEGG: fbc:FB2170_13698 hypothetical protein; SPTR: uncharacterized protein YP_004261032.1 KEGG: str:Sterm_3566 hypothetical protein; SPTR: uncharacterized protein YP_004261033.1 InterPro IPR012544; KEGG: fjo:Fjoh_0224 hypothetical protein; PFAM: Protein of unknown function DUF1696; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1696) YP_004261034.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR002078: IPR003593; KEGG: fbc:FB2170_01115 C4-dicarboxylate transport transcriptional regulatory protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: C4-dicarboxylate transport transcriptional regulatory protein; PFAM: Response regulator receiver domain; Sigma-54 interaction domain YP_004261035.1 KEGG: fbc:FB2170_01120 hypothetical protein; SPTR: uncharacterized protein YP_004261036.1 COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: zpr:ZPR_3117 small-conductance mechanosensitive ion channel protein; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel YP_004261037.1 COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: fbc:FB2170_01125 ABC transporter, permease, SPTR: ABC transporter, permease YP_004261038.1 COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_01130 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter YP_004261039.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone DnaJ; InterPro IPR001623: IPR001305: IPR002939: IPR012724; KEGG: fbc:FB2170_01135 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ; TIGRFAM: Chaperone DnaJ; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_004261040.1 COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: fbc:FB2170_01140 GrpE protein (HSP-70 cofactor); PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; PFAM: GrpE YP_004261041.1 COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: fbc:FB2170_01150 hypothetical protein; PFAM: Domain of unknown function DUF752; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF752) YP_004261042.1 KEGG: fbc:FB2170_01155 hypothetical protein; SPTR: uncharacterized protein YP_004261043.1 COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544: IPR005786; KEGG: rbi:RB2501_11167 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain-amino-acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase II; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_004261044.1 KEGG: fbc:FB2170_01172 hypothetical protein; SPTR: uncharacterized protein; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase YP_004261045.1 KEGG: fbc:FB2170_01177 hypothetical protein; SPTR: uncharacterized protein YP_004261046.1 KEGG: rbi:RB2501_11152 hypothetical protein; SPTR: uncharacterized protein YP_004261047.1 COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; HAMAP: Camphor resistance CrcB protein; InterPro IPR003691; KEGG: fbc:FB2170_01182 hypothetical protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein CrcB homolog; TIGRFAM: Camphor resistance CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein YP_004261049.1 COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: fbc:FB2170_01187 P-II family protein; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; SPTR: P-II family protein; PFAM: Nitrogen regulatory protein P-II YP_004261050.1 COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: zpr:ZPR_3134 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_004261051.1 KEGG: fbc:FB2170_01197 hypothetical protein; SPTR: uncharacterized protein YP_004261052.1 COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: fbc:FB2170_01202 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1684) YP_004261053.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: fbc:FB2170_01207 integral membrane transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: integral membrane transport protein; PFAM: Major Facilitator Superfamily YP_004261054.1 COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: fbc:FB2170_01212 hypothetical protein; PFAM: ThiJ/PfpI; SPTR: uncharacterized protein; PFAM: DJ-1/PfpI family YP_004261055.1 KEGG: fbc:FB2170_01217 hypothetical protein; SPTR: uncharacterized protein YP_004261056.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fbc:FB2170_01222 mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel YP_004261057.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019887: IPR019888; KEGG: fbc:FB2170_01227 probable transcriptional regulatory protein, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulatory protein, AsnC family; PFAM: AsnC family YP_004261058.1 KEGG: fbc:FB2170_01232 hypothetical protein; SPTR: uncharacterized protein YP_004261059.1 COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158: IPR005129: IPR006099: IPR006159; KEGG: gfo:GFO_0483 methylmalonyl-CoA mutase-like protein; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; ArgK protein; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: Methylmalonyl-CoA mutase, C-terminal; PFAM: ArgK protein; Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_004261060.1 COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR002912: IPR002376: IPR004810; KEGG: fbc:FB2170_01237 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; PRIAM: Formyltetrahydrofolate deformylase; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase; PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_004261061.1 KEGG: clj:CLJU_c23380 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; SPTR: lipoprotein YP_004261062.1 KEGG: lsl:LSL_0931 Na(+)/H(+) antiporter; SPTR: MATE efflux family protein YP_004261063.1 InterPro IPR006260; KEGG: fbc:FB2170_03005 TonB; PFAM: TonB, C-terminal; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_004261064.1 COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994: IPR002467; KEGG: zpr:ZPR_0144 YflG; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_004261065.1 KEGG: cpi:Cpin_7115 protein-disulfide reductase; SPTR: Thiol:disulfide interchange protein dsbD YP_004261066.1 KEGG: bfs:BF3356 hypothetical protein; SPTR: uncharacterized protein YP_004261067.1 KEGG: pfh:PFHG_01750 conserved hypothetical protein; SPTR: uncharacterized protein YP_004261068.1 KEGG: ngr:NAEGRDRAFT_68795 hypothetical protein; SPTR: Predicted protein YP_004261069.1 KEGG: mmz:MmarC7_1361 polysaccharide biosynthesis protein; SPTR: uncharacterized protein YP_004261070.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_09476 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Beta-lactamase-related; SPTR: Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Beta-lactamase YP_004261071.1 InterPro IPR000086; KEGG: vsp:VS_II0417 MutT/NUDIX protein; PFAM: NUDIX hydrolase domain; SPTR: Phosphohydrolase (MutT/nudix family protein); PFAM: NUDIX domain YP_004261072.1 COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cat:CA2559_09328 hypothetical protein; PFAM: Helix-turn-helix, HxlR type; SPTR: transcriptional regulator; PFAM: HxlR-like helix-turn-helix YP_004261073.1 InterPro IPR004360: IPR019883; KEGG: cat:CA2559_09323 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Lactoylglutathione lyase; TIGRFAM: Lactoylglutathione lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_004261074.1 KEGG: pyo:PY03726 hypothetical protein; SPTR: uncharacterized protein YP_004261075.1 InterPro IPR006598; KEGG: bth:BT_3363 lipopolysaccharide core biosynthesis protein LpsA; SMART: Lipopolysaccharide-modifying protein; SPTR: Lipopolysaccharide core biosynthesis protein LpsA; PFAM: Arabidopsis thaliana protein of unknown function (DUF821) YP_004261076.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: cat:CA2559_13328 acetyltransferase, GNAT family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family protein; PFAM: Acetyltransferase (GNAT) family YP_004261077.1 InterPro IPR000326; KEGG: fbc:FB2170_04340 phosphoesterase, PA-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 family protein; PFAM: PAP2 superfamily YP_004261078.1 InterPro IPR001647; KEGG: gfo:GFO_0817 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR family transcriptional regulator protein; PFAM: Bacterial regulatory proteins, tetR family YP_004261079.1 COGs: COG2128 conserved hypothetical protein; KEGG: cat:CA2559_12088 hypothetical protein; SPTR: uncharacterized protein YP_004261080.1 InterPro IPR009799; KEGG: pat:Patl_2708 ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: uncharacterized protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein YP_004261081.1 COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: gfo:GFO_0822 DsbA thioredoxin oxdioreductase-polyketide synthase; PFAM: DSBA-like thioredoxin domain; SPTR: DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain YP_004261082.1 InterPro IPR003534; KEGG: gbm:Gbem_1195 major royal jelly-like protein; PFAM: Major royal jelly-related; SPTR: uncharacterized protein; PFAM: Major royal jelly protein YP_004261083.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR006328: IPR006388; KEGG: pin:Ping_2901 L-2-haloalkanoic acid dehalogenase, HAD superfamily protein; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: (S)-2-haloacid dehalogenase; SPTR: L-2-haloalkanoic acid dehalogenase, HAD superfamily protein; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II YP_004261084.1 COGs: COG1794 Aspartate racemase; InterPro IPR015942: IPR004380; KEGG: rmr:Rmar_2418 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase YP_004261085.1 COGs: COG1289 membrane protein; KEGG: gfo:GFO_1528 hypothetical protein; SPTR: uncharacterized protein; PFAM: Fusaric acid resistance protein family; TIGRFAM: hypothetical membrane protein, TIGR01666 YP_004261086.1 KEGG: pic:PICST_77444 hypothetical protein; SPTR: Predicted protein YP_004261087.1 InterPro IPR001845; KEGG: cat:CA2559_06305 transcriptional regulator, ArsR family protein; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein YP_004261088.1 KEGG: cat:CA2559_06300 hypothetical protein; SPTR: uncharacterized protein YP_004261089.1 InterPro IPR005913; KEGG: cat:CA2559_06295 short chain dehydrogenase; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: Short chain dehydrogenase; PFAM: RmlD substrate binding domain YP_004261090.1 KEGG: fbc:FB2170_01242 hypothetical protein; SPTR: uncharacterized protein YP_004261091.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fbc:FB2170_01272 beta-ketoadipate enol-lactone hydrolase, PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold YP_004261092.1 KEGG: fbc:FB2170_01277 hypothetical protein; SPTR: uncharacterized protein YP_004261093.1 COGs: COG0284 Orotidine-5'-phosphate decarboxylase; HAMAP: Orotidine 5'-phosphate decarboxylase, type 2; InterPro IPR001754: IPR011995; KEGG: fps:FP0537 orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; PRIAM: Orotidine-5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase domain; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_004261094.1 COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR005139: IPR000352: IPR004373; KEGG: fbc:FB2170_01287 peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; SMART: Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_004261095.1 KEGG: fbc:FB2170_01292 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3570) YP_004261096.1 KEGG: fbc:FB2170_01297 hypothetical protein; SPTR: uncharacterized protein YP_004261097.1 COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_01302 membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: ApbE family YP_004261098.1 KEGG: fbc:FB2170_01307 thioredoxin disulfide isomerase; SPTR: thioredoxin disulfide isomerase; PFAM: Protein of unknown function, DUF255 YP_004261099.1 InterPro IPR017941; KEGG: fbc:FB2170_01312 hypothetical protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: uncharacterized protein; PFAM: Rieske [2Fe-2S] domain YP_004261100.1 COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: fbc:FB2170_01317 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal domain YP_004261101.1 InterPro IPR000620; KEGG: fbc:FB2170_00055 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; PFAM: EamA-like transporter family YP_004261102.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: fbc:FB2170_00060 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: uncharacterized protein; PFAM: Predicted permease YjgP/YjgQ family YP_004261103.1 COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR002616: IPR004803; KEGG: fps:FP0610 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_004261104.1 COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: gfo:GFO_0595 transketolase N-terminal section; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase; PFAM: Transketolase, thiamine diphosphate binding domain YP_004261105.1 COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: rbi:RB2501_12347 transketolase, C-terminal subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase, C-terminal subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_004261106.1 KEGG: fbc:FB2170_00070 hypothetical protein; SPTR: uncharacterized protein YP_004261107.1 InterPro IPR001179; KEGG: rbi:RB2501_12337 hypothetical protein; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: uncharacterized protein YP_004261108.1 COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: fbc:FB2170_00080 heat shock protein 15; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Heat shock protein 15; PFAM: S4 domain YP_004261109.1 COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_00090 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyl transferase domain YP_004261110.1 COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: fbc:FB2170_00095 shikimate kinase; PFAM: Shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase YP_004261111.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103; KEGG: gfo:GFO_1719 glycosyl hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Secreted glycosyl hydrolase, family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_004261112.1 InterPro IPR013148; KEGG: gfo:GFO_1720 secreted protein; PFAM: Glycosyl hydrolases family 32, N-terminal; SPTR: Secreted protein; PFAM: Glycosyl hydrolases family 43 YP_004261113.1 COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: caa:Caka_0443 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_004261114.1 COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: caa:Caka_0224 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: L-threonine 3-dehydrogenase; SPTR: Alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_004261115.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: caa:Caka_0226 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 2-deoxy-D-gluconate 3-dehydrogenase; SPTR: MS142, gluconate dehydrogenase; PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase YP_004261116.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pat:Patl_0895 sulfatase; PFAM: Sulfatase; PRIAM: Arylsulfatase; SPTR: Sulfatase; PFAM: Sulfatase YP_004261117.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: sde:Sde_2645 betaine-aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Lactaldehyde dehydrogenase; SPTR: MS143, aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004261118.1 COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341: IPR013342; KEGG: caa:Caka_0444 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Mandelate racemase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: MS144, racemase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004261119.1 COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: lby:Lbys_2505 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: MS145, aldose epimerase; PFAM: Aldose 1-epimerase YP_004261120.1 InterPro IPR010476; KEGG: phe:Phep_3885 rhamnose-proton symporter; PFAM: RhaT l-rhamnose-proton symport 2; SPTR: MS146, L-rhamnose transporter; PFAM: L-rhamnose-proton symport protein (RhaT) YP_004261121.1 InterPro IPR008000; KEGG: gfo:GFO_1701 hypothetical protein; PFAM: Rhamnose mutarotase; SPTR: Protein containing DUF718; PFAM: Domain of unknown function (DUF718) YP_004261122.1 COGs: COG0738 Fucose permease; InterPro IPR011701: IPR005275; KEGG: fbc:FB2170_03380 L-fucose permease; PFAM: Major facilitator superfamily MFS-1; SPTR: L-fucose permease; TIGRFAM: L-fucose permease; PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease YP_004261123.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: gfo:GFO_1703 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: Short-chain dehydrogenase/reductase; PFAM: short chain dehydrogenase YP_004261124.1 COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: fbc:FB2170_03370 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: uncharacterized protein; PFAM: Amidohydrolase YP_004261125.1 COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131: IPR013118; KEGG: gfo:GFO_1705 altronate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Tagaturonate reductase; SPTR: Altronate oxidoreductase; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_004261126.1 COGs: COG2721 Altronate dehydratase; InterPro IPR013974: IPR007392; KEGG: fbc:FB2170_03355 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; PRIAM: Altronate dehydratase; SMART: SAF domain; SPTR: Altronate hydrolase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus YP_004261127.1 COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: gfo:GFO_1709 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; PRIAM: L-threonine 3-dehydrogenase; SPTR: Zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_004261128.1 COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110: IPR011123: IPR003661: IPR003594: IPR 001789: IPR000005: IPR018060; KEGG: gfo:GFO_1697 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATPase-like, ATP-binding domain; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two-component system sensor histidine kinase/response regulator hybrid; PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004261129.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03385 choline sulfatase; PFAM: Sulfatase; SPTR: Choline sulfatase; PFAM: Sulfatase YP_004261130.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103; KEGG: sus:Acid_4901 glycoside hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_004261131.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5281 N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase; PRIAM: N-acetylgalactosamine-6-sulfatase; SPTR: N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase YP_004261132.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03325 arylsulfatase A precursor; PFAM: Sulfatase; PRIAM: Cerebroside-sulfatase; SPTR: Arylsulfatase A; PFAM: Sulfatase YP_004261133.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103; KEGG: gfo:GFO_1727 glycosyl hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Membrane or secreted glycosyl hydrolase, family 2; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_004261134.1 KEGG: caa:Caka_0492 Ig family protein; SPTR: Ig family protein YP_004261135.1 KEGG: caa:Caka_0973 beta-agarase; PRIAM: Beta-agarase; SPTR: Beta-agarase YP_004261136.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB198 N-acetylgalactosamine-4-sulfatase precursor; PFAM: Sulfatase; PRIAM: Arylsulfatase; SPTR: N-acetylgalactosamine-6-sulfate sulfatase; PFAM: Sulfatase YP_004261137.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5282 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); PFAM: Sulfatase YP_004261138.1 InterPro IPR000757; KEGG: caa:Caka_0895 Ig family protein; PFAM: Glycoside hydrolase, family 16; SPTR: Beta-porphyranase C YP_004261139.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB6781 choline sulfatase; PFAM: Sulfatase; SPTR: Choline sulfatase; PFAM: Sulfatase YP_004261140.1 COGs: COG5434 Endopygalactorunase; InterPro IPR000743; KEGG: phe:Phep_3113 glycoside hydrolase family 28; PFAM: Glycoside hydrolase, family 28; SPTR: uncharacterized protein; PFAM: Glycosyl hydrolases family 28 YP_004261141.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03330 probable sulfatase AtsG; PFAM: Sulfatase; SPTR: Probable sulfatase atsG; PFAM: Sulfatase YP_004261142.1 InterPro IPR000757; KEGG: caa:Caka_0895 Ig family protein; PFAM: Glycoside hydrolase, family 16; SPTR: Beta-porphyranase B; PFAM: Glycosyl hydrolases family 16 YP_004261143.1 InterPro IPR006710; KEGG: fbc:FB2170_15408 hypothetical protein; PFAM: Glycoside hydrolase, family 43; SPTR: Glycoside hydrolase; PFAM: Glycosyl hydrolases family 43 YP_004261144.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pat:Patl_0829 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; PFAM: Sulfatase YP_004261145.1 COGs: COG3507 Beta-xylosidase; InterPro IPR006710: IPR005084: IPR006584; KEGG: pat:Patl_0810 carbohydrate-binding family 6 protein; PFAM: Glycoside hydrolase, family 43; Carbohydrate binding domain, family 6; PRIAM: Xylan 1,4-beta-xylosidase; SMART: Cellulose binding, type IV; SPTR: Carbohydrate binding family 6; PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 43 YP_004261146.1 COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: caa:Caka_0789 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: MS119, fucosidase; PFAM: Alpha-L-fucosidase YP_004261147.1 InterPro IPR010496; KEGG: caa:Caka_0199 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080) YP_004261148.1 COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: gfo:GFO_1710 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase YP_004261149.1 KEGG: pat:Patl_0833 hypothetical protein; SPTR: uncharacterized protein YP_004261150.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: gfo:GFO_1698 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; PFAM: Sulfatase YP_004261151.1 InterPro IPR000757; KEGG: caa:Caka_0364 beta-agarase; PFAM: Glycoside hydrolase, family 16; PRIAM: Beta-agarase; SPTR: Beta-agarase B YP_004261152.1 KEGG: mma:MM_0265 hypothetical protein; SPTR: uncharacterized protein YP_004261153.1 InterPro IPR012944; KEGG: gfo:GFO_0689 SusD/RagB family protein; PFAM: RagB/SusD; SPTR: outer membrane protein; PFAM: SusD family YP_004261154.1 InterPro IPR012910: IPR000531; KEGG: pdi:BDI_0418 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261155.1 COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: caa:Caka_0507 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase YP_004261156.1 KEGG: fbc:FB2170_06415 hypothetical protein; SPTR: uncharacterized protein; PFAM: Planctomycete cytochrome C YP_004261157.1 InterPro IPR006311; KEGG: rba:RB9882 peptidylglycine monooxygenase; SPTR: Similar to peptidylglycine monooxygenase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004261158.1 InterPro IPR010869: IPR006311; KEGG: fbc:FB2170_06405 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004261159.1 InterPro IPR011444: IPR022655; KEGG: fbc:FB2170_06400 hypothetical protein; PFAM: Domain of unknown function DUF1553; Domain of unknown function DUF1549; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553) YP_004261160.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: bvu:BVU_0218 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_004261161.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006311; KEGG: fbc:FB2170_10661 probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004261162.1 InterPro IPR000551; KEGG: sli:Slin_5173 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family protein; PFAM: MerR family regulatory protein YP_004261163.1 COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_07619 adhesion lipoprotein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: adhesion lipoprotein; PFAM: Fasciclin domain YP_004261164.1 COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076: IPR014105; KEGG: fbc:FB2170_07624 phytoene dehydrogenase 1 (phytoene desaturase); PFAM: FAD dependent oxidoreductase; SPTR: Phytoene dehydrogenase 1 (Phytoene desaturase); TIGRFAM: Zeta-phytoene desaturase; PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase YP_004261165.1 COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: fbc:FB2170_07629 phytoene synthetase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthetase; PFAM: Squalene/phytoene synthase YP_004261166.1 KEGG: chu:CHU_2037 hypothetical protein; SPTR: uncharacterized protein YP_004261167.1 InterPro IPR006694; KEGG: fbc:FB2170_07634 beta carotene hydroxylase (CrtZ); PFAM: Fatty acid hydroxylase; SPTR: Beta carotene hydroxylase (CrtZ); PFAM: Fatty acid hydroxylase superfamily YP_004261168.1 InterPro IPR017825; KEGG: dfe:Dfer_2034 lycopene cyclase domain protein; SPTR: Lycopene cyclase domain protein; TIGRFAM: Lycopene cyclase domain; TIGRFAM: lycopene cyclase domain YP_004261169.1 COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050: IPR005101; KEGG: fjo:Fjoh_0061 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photo-lyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_004261170.1 InterPro IPR000866; KEGG: fbc:FB2170_00490 thioredoxin, PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Thioredoxin, ; PFAM: AhpC/TSA family YP_004261171.1 KEGG: fbc:FB2170_00495 thiol:disulfide interchange protein TlpA; SPTR: Thiol:disulfide interchange protein tlpA; PFAM: AhpC/TSA family YP_004261172.1 COGs: COG1048 Aconitase A; InterPro IPR001030: IPR000573: IPR006248; KEGG: fbc:FB2170_00500 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: Aconitate hydratase; SPTR: Aconitate hydratase; TIGRFAM: Aconitase, mitochondrial-like; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, mitochondrial YP_004261173.1 COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_00505 methanol dehydrogenase regulator; PFAM: ATPase, AAA-3; SPTR: Methanol dehydrogenase regulator; PFAM: ATPase family associated with various cellular activities (AAA) YP_004261174.1 InterPro IPR000297; KEGG: fbc:FB2170_00510 exported peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: exported peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain YP_004261175.1 KEGG: fbc:FB2170_00515 hypothetical protein; SPTR: uncharacterized protein YP_004261176.1 KEGG: fps:FP1232 hypothetical protein; SPTR: uncharacterized protein YP_004261177.1 KEGG: fbc:FB2170_00530 hypothetical protein; SPTR: uncharacterized protein YP_004261178.1 COGs: COG5373 membrane protein; InterPro IPR019286; KEGG: coc:Coch_1520 membrane protein-like protein; PFAM: Protein of unknown function DUF2339, transmembrane; SPTR: Conserved hypothetical transmembrane protein; PFAM: Predicted membrane protein (DUF2339) YP_004261179.1 KEGG: fps:FP1116 hypothetical protein; SPTR: uncharacterized protein YP_004261180.1 COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425: IPR012269; KEGG: fbc:FB2170_08014 aquaporin Z; PFAM: Major intrinsic protein; SPTR: Aquaporin Z; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_004261181.1 COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR013848: IPR007197: IPR005840: IPR006638: IPR 005839; KEGG: gfo:GFO_2238 radical SAM superfamily protein, UPF0004; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family YP_004261182.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cat:CA2559_13543 hydrolase transmembrane protein; PFAM: Beta-lactamase-related; SPTR: 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase YP_004261183.1 COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: rbi:RB2501_01835 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutaminyl-tRNA synthase (Glutamine-hydrolyzing); PFAM: Amidase YP_004261184.1 COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822: IPR000897: IPR003593: IPR004390; KEGG: fbc:FB2170_15926 recognition particle-docking protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: recognition particle-docking protein; TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_004261185.1 KEGG: fbc:FB2170_15931 hypothetical protein; SPTR: uncharacterized protein YP_004261186.1 HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: rbi:RB2501_01850 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_004261187.1 COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: fbc:FB2170_15941 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_004261188.1 COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453: IPR008136: IPR008135; KEGG: fbc:FB2170_15946 competence-damage inducible; PFAM: CinA, C-terminal; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain YP_004261189.1 InterPro IPR008207; KEGG: fbc:FB2170_15951 hypothetical protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: uncharacterized protein; PFAM: Hpt domain YP_004261190.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: fbc:FB2170_15956 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_004261191.1 KEGG: fbc:FB2170_15961 hypothetical protein; SPTR: uncharacterized protein YP_004261192.1 COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR013520: IPR006055; KEGG: fbc:FB2170_15966 DNA polymerase III epsilon chain; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III epsilon chain; PFAM: Exonuclease YP_004261193.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078; KEGG: cat:CA2559_07590 lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: Lipoamide acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_004261194.1 COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: RecR protein; InterPro IPR015967: IPR006171: IPR000093; KEGG: fbc:FB2170_15981 recombination protein RecR; SMART: Toprim domain; SPTR: Recombination protein recR; TIGRFAM: RecR protein; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_004261195.1 COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_15986 cation symporter; PFAM: Sodium/solute symporter; SPTR: cation symporter; PFAM: Sodium:solute symporter family YP_004261196.1 KEGG: fbc:FB2170_15991 hypothetical protein; SPTR: uncharacterized protein YP_004261197.1 COGs: COG0332 3-oxoacyl-ACP; HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR013751: IPR013747: IPR004655; KEGG: fbc:FB2170_16001 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-ACP synthase 3 2; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-ACP synthase III YP_004261198.1 COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594: IPR020576; KEGG: fbc:FB2170_16006 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SPTR: Heat shock protein 90; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_004261199.1 KEGG: fjo:Fjoh_2750 hypothetical protein; SPTR: uncharacterized protein YP_004261200.1 KEGG: fbc:FB2170_00690 hypothetical protein; SPTR: uncharacterized protein YP_004261201.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: rbi:RB2501_11582 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004261202.1 KEGG: fjo:Fjoh_1132 hypothetical protein; SPTR: uncharacterized protein YP_004261203.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fjo:Fjoh_1133 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004261204.1 KEGG: fbc:FB2170_16041 hypothetical protein; SPTR: uncharacterized protein YP_004261205.1 COGs: COG2258 conserved hypothetical protein; InterPro IPR005302; KEGG: fbc:FB2170_16046 hypothetical protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; SPTR: uncharacterized protein; PFAM: MOSC domain YP_004261206.1 COGs: COG4270 membrane protein; KEGG: gfo:GFO_2346 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004261207.1 KEGG: fbc:FB2170_16051 hypothetical protein; SPTR: uncharacterized protein YP_004261208.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: fbc:FB2170_16056 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004261209.1 InterPro IPR003154; KEGG: fbc:FB2170_16071 S1/P1 nuclease; PFAM: S1/P1 nuclease; SPTR: S1/P1 Nuclease; PFAM: S1/P1 Nuclease YP_004261210.1 COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: rbi:RB2501_01970 penicillin-binding protein 1A, PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A, ; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase YP_004261211.1 KEGG: cte:CT0485 hypothetical protein; SPTR: uncharacterized protein YP_004261212.1 KEGG: gfo:GFO_2351 hypothetical protein; SPTR: uncharacterized protein YP_004261213.1 COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200: IPR000150: IPR006379; KEGG: fbc:FB2170_16086 hypothetical protein; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: uncharacterized protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_004261214.1 COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: rbi:RB2501_01980 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF819) YP_004261215.1 KEGG: fbc:FB2170_16096 hypothetical protein; SPTR: uncharacterized protein YP_004261216.1 KEGG: fbc:FB2170_16101 hypothetical protein; SPTR: uncharacterized protein YP_004261217.1 COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250; KEGG: fbc:FB2170_16106 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase; TIGRFAM: Mannose-6-phosphate isomerase, type I; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_004261218.1 COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: fbc:FB2170_16111 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_004261219.1 COGs: COG1443 Isopentenyldiphosphate isomerase; HAMAP: Isopentenyl-diphosphate delta-isomerase, type 1; InterPro IPR000086: IPR011876; KEGG: rbi:RB2501_02010 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase domain; PRIAM: Isopentenyl-diphosphate Delta-isomerase; SPTR: isopentenyl-diphosphate delta-isomerase; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1 YP_004261220.1 InterPro IPR019861; KEGG: fbc:FB2170_16121 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004261221.1 InterPro IPR003367; KEGG: fbc:FB2170_16126 VCBS protein; SPTR: VCBS protein YP_004261222.1 InterPro IPR008160; KEGG: rbi:RB2501_02025 hypothetical protein; PFAM: Collagen triple helix repeat; SPTR: uncharacterized protein; PFAM: Collagen triple helix repeat (20 copies) YP_004261223.1 InterPro IPR003644: IPR000859: IPR008454: IPR006626; KEGG: rbi:RB2501_02035 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; CUB; Collagen-binding surface protein Cna-like, B-type domain; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: uncharacterized protein; PFAM: Calx-beta domain; CUB domain YP_004261224.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: fbc:FB2170_16151 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004261225.1 InterPro IPR019861; KEGG: fbc:FB2170_16156 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004261226.1 InterPro IPR003367; KEGG: rbi:RB2501_02050 thrombospondin type 3 repeat family protein/Calx-beta domain protein; PFAM: Thrombospondin, type 3-like repeat; SPTR: Thrombospondin type 3 repeat family protein/Calx-beta domain protein YP_004261227.1 COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR000795: IPR004548: IPR005225; KEGG: fbc:FB2170_16166 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; SPTR: Peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_004261228.1 KEGG: fbc:FB2170_16171 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3467) YP_004261229.1 COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; InterProIPR007080: IPR000722: IPR007066: IPR007083: IPR 007081: IPR012754: IPR006592; KEGG: fbc:FB2170_16176 DNA-directed RNA polymerase beta' subunit; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_004261230.1 COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR007644: IPR007642: IPR007645: IPR019462: IPR 007120: IPR007641: IPR010243; KEGG: fbc:FB2170_16181 DNA-directed RNA polymerase beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_004261231.1 COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR013823: IPR000206; KEGG: fbc:FB2170_16186 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_004261232.1 COGs: COG0244 Ribosomal protein L10; HAMAP: Ribosomal protein L10; InterPro IPR001790: IPR022973; KEGG: fbc:FB2170_16191 50S ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; SPTR: 50S ribosomal protein L10; PFAM: Ribosomal protein L10 YP_004261233.1 COGs: COG0081 Ribosomal protein L1; InterPro IPR002143: IPR005878; KEGG: rbi:RB2501_02090 50S ribosomal protein L1; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_004261234.1 COGs: COG0080 Ribosomal protein L11; InterPro IPR020784: IPR020783: IPR000911: IPR006519; KEGG: fbc:FB2170_16201 50S ribosomal protein L11; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_004261235.1 COGs: COG0250 Transcription antiterminator; InterPro IPR006645: IPR005824: IPR001062; KEGG: fbc:FB2170_16206 transcription antitermination protein; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_004261236.1 InterPro IPR001901: IPR005807; KEGG: fbc:FB2170_16211 elongation factor Tu; PFAM: Protein SecE/Sec61-gamma protein; SPTR: Elongation factor Tu; TIGRFAM: SecE subunit of protein translocation complex; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_004261237.1 COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795: IPR004161: IPR004160: IPR004541: IPR 005225; KEGG: fbc:FB2170_16216 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_004261238.1 InterPro IPR003489; KEGG: fbc:FB2170_16221 sigma-54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Sigma-54 modulation protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_004261239.1 COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107: IPR002104; KEGG: fbc:FB2170_16226 site-specific recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: site-specific recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_004261240.1 HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: fbc:FB2170_16231 ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_004261241.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: zpr:ZPR_1152 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Isovaleryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_004261242.1 KEGG: fbc:FB2170_16241 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_004261243.1 COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: rbi:RB2501_02150 sodium/alanine symporter; PFAM: Sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_004261244.1 COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099: IPR003148: IPR006037; KEGG: rbi:RB2501_02155 potassium uptake protein, TrkA family; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; SPTR: Potassium uptake protein, TrkA family; PFAM: TrkA-N domain; Ion channel; TrkA-C domain YP_004261245.1 KEGG: rbi:RB2501_02160 hypothetical protein; SPTR: uncharacterized protein; manually curated; PFAM: PspC domain YP_004261246.1 KEGG: fbc:FB2170_16261 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2851) YP_004261247.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fbc:FB2170_16266 rhodanese-like domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like domain protein; PFAM: Rhodanese-like domain YP_004261248.1 InterPro IPR000835; KEGG: fbc:FB2170_16271 hypothetical 161 kDa transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family YP_004261249.1 COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: rbi:RB2501_02190 YCE I like family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein; PFAM: YceI-like domain YP_004261250.1 COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890; KEGG: fbc:FB2170_16281 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme YP_004261251.1 COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991: IPR006221; KEGG: fjo:Fjoh_4892 glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase, component II; TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_004261252.1 COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR017459: IPR000312: IPR005940; KEGG: fbc:FB2170_16291 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_004261253.1 COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: fbc:FB2170_16296 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004261254.1 COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: fbc:FB2170_16301 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; manually curated; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_004261255.1 COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; InterPro IPR001926: IPR023026: IPR006654; KEGG: fjo:Fjoh_4896 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain; TIGRFAM: Tryptophan synthase, beta chain; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_004261256.1 COGs: COG0159 Tryptophan synthase alpha chain; HAMAP: Tryptophan synthase, alpha chain; InterPro IPR002028; KEGG: fjo:Fjoh_4899 tryptophan synthase subunit alpha; PFAM: Tryptophan synthase, alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_004261257.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: zpr:ZPR_0250 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family YP_004261258.1 KEGG: sli:Slin_5891 hypothetical protein; SPTR: uncharacterized protein YP_004261259.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: srm:SRM_02667 conserved hypothetical protein containing TonB receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261260.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: dfe:Dfer_0741 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter YP_004261261.1 KEGG: rbi:RB2501_02235 hypothetical protein; SPTR: uncharacterized protein YP_004261262.1 KEGG: fba:FIC_01898 hypothetical protein; SPTR: uncharacterized protein YP_004261263.1 COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR013229: IPR012910: IPR000531: IPR010105; KEGG: cat:CA2559_11443 ferrichrome-iron receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; PEGA; SPTR: iron transport receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; PEGA domain; TIGRFAM: TonB-dependent siderophore receptor YP_004261264.1 COGs: COG1038 Pyruvate carboxylase; InterProIPR005481: IPR005479: IPR005482: IPR000891: IPR 003379: IPR000089: IPR005930; KEGG: cat:CA2559_10083 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Carboxylase, conserved domain; Biotin/lipoyl attachment; PRIAM: Pyruvate carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Pyruvate carboxylase; TIGRFAM: Pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; HMGL-like; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase YP_004261265.1 KEGG: rbi:RB2501_02250 hypothetical protein; SPTR: uncharacterized protein YP_004261266.1 KEGG: fbc:FB2170_01110 hypothetical protein; SPTR: uncharacterized protein YP_004261267.1 KEGG: bha:BH3026 oligopeptide ABC transpoter (oligopeptide-binding protein); SPTR: uncharacterized protein YP_004261268.1 COGs: COG3022 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0246; InterPro IPR005583; KEGG: fbc:FB2170_16346 hypothetical protein; PFAM: Uncharacterised protein family UPF0246; SPTR: UPF0246 protein M23134_04200; PFAM: Protein of unknown function (DUF328) YP_004261269.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006145: IPR006225; KEGG: fbc:FB2170_16351 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_004261270.1 COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: fbc:FB2170_16356 hypothetical protein; PFAM: PASTA; SMART: PASTA; SPTR: uncharacterized protein; PFAM: PASTA domain YP_004261271.1 COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127: IPR011095: IPR005905; KEGG: fjo:Fjoh_2618 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_004261272.1 COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004820: IPR001980: IPR004821; KEGG: fbc:FB2170_16366 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_004261273.1 InterPro IPR000834; KEGG: cat:CA2559_07966 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: uncharacterized protein; PFAM: Zinc carboxypeptidase YP_004261274.1 InterPro IPR000086; KEGG: fbc:FB2170_16381 orotate phosphoribosyltransferase; PFAM: NUDIX hydrolase domain; SPTR: Orotate phosphoribosyltransferase; PFAM: NUDIX domain YP_004261275.1 COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836: IPR004467; KEGG: fbc:FB2170_16386 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_004261276.1 KEGG: fbc:FB2170_16391 hypothetical protein; SPTR: uncharacterized protein YP_004261277.1 COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143: IPR004408; KEGG: fbc:FB2170_16396 biotin--(acetyl-CoA carboxylase) synthetase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: biotin--(Acetyl-CoA carboxylase) synthetase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; manually curated; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_004261278.1 COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: fbc:FB2170_16401 hypothetical protein; PFAM: Ribosome-associated, Iojap-like; SPTR: uncharacterized protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_004261279.1 COGs: COG0465 ATP-dependent Zn protease; InterProIPR011546: IPR003959: IPR000642: IPR003593: IPR 005936; KEGG: fbc:FB2170_16406 transmembrane AAA-metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: transmembrane AAA-metalloprotease FtsH; TIGRFAM: Peptidase M41, FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_004261280.1 KEGG: fbc:FB2170_16411 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556 YP_004261281.1 COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: fbc:FB2170_16416 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family YP_004261282.1 COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase-related protein; InterPro IPR003817: IPR004428; KEGG: fbc:FB2170_16421 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: Phosphatidylserine decarboxylase-related protein; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_004261283.1 KEGG: fbc:FB2170_16426 hypothetical protein; SPTR: uncharacterized protein; PFAM: Acyl CoA binding protein YP_004261284.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_16436 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: uncharacterized protein; PFAM: Fatty acid hydroxylase superfamily YP_004261285.1 COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002300: IPR013155: IPR019499: IPR002303; KEGG: fbc:FB2170_16461 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_004261286.1 InterPro IPR011467; KEGG: fbc:FB2170_16466 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1573) YP_004261287.1 InterPro IPR001478; KEGG: fbc:FB2170_16471 aspartate aminotransferase; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Aspartate aminotransferase; PFAM: PDZ domain (Also known as DHR or GLGF) YP_004261288.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_16476 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Aspartate aminotransferase; PFAM: Aminotransferase class I and II YP_004261289.1 COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR006094: IPR011601: IPR003170; KEGG: fbc:FB2170_16481 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_004261290.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR007630: IPR014284; KEGG: fbc:FB2170_16491 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004261291.1 KEGG: fbc:FB2170_16496 RNA polymerase sigma-70 factor; SPTR: RNA polymerase sigma-70 factor; PFAM: Anti-sigma-K factor rskA YP_004261292.1 KEGG: fbc:FB2170_16501 hypothetical protein; SPTR: uncharacterized protein YP_004261293.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_16506 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004261294.1 COGs: COG0320 Lipoate synthase; HAMAP: Lipoate synthase; InterPro IPR007197: IPR003698: IPR006638; KEGG: fbc:FB2170_16511 lipoyl synthase; PFAM: Radical SAM; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: Lipoate synthase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_004261295.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828: IPR020829: IPR006424; KEGG: fbc:FB2170_16516 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_004261296.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR001789; KEGG: fbc:FB2170_16521 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_004261297.1 COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: fbc:FB2170_16526 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_004261298.1 COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: fbc:FB2170_16531 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_004261299.1 InterPro IPR003743; KEGG: fbc:FB2170_16536 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: uncharacterized protein; PFAM: zinc ribbon domain YP_004261300.1 COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: rbi:RB2501_02455 monooxygenase; PFAM: FAD dependent oxidoreductase; PRIAM: Kynurenine 3-monooxygenase; SPTR: Monooxygenase; PFAM: FAD binding domain YP_004261301.1 COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_16546 protease subunit of ATP-dependent Clp protease; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 2; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_004261302.1 KEGG: fbc:FB2170_16551 hypothetical protein; SPTR: uncharacterized protein YP_004261303.1 COGs: COG3844 Kynureninase; InterPro IPR010111; KEGG: gfo:GFO_2720 kynureninase; PRIAM: Kynureninase; SPTR: Kynureninase; TIGRFAM: Kynureninase; PFAM: Aminotransferase class-V; TIGRFAM: kynureninase YP_004261304.1 COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: fbc:FB2170_16576 O-methyltransferase; PFAM: O-methyltransferase, family 3; PRIAM: Caffeoyl-CoA O-methyltransferase; SPTR: O-methyltransferase; PFAM: O-methyltransferase YP_004261305.1 InterPro IPR000326; KEGG: fbc:FB2170_16581 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 superfamily protein; PFAM: PAP2 superfamily YP_004261306.1 InterPro IPR003369; KEGG: fbc:FB2170_16586 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Sec-independent translocation protein mttA/Hcf106; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_004261307.1 COGs: COG0308 Aminopeptidase N; KEGG: fbc:FB2170_16591 aminopeptidase; SPTR: aminopeptidase YP_004261308.1 KEGG: fbc:FB2170_16596 hypothetical protein; SPTR: uncharacterized protein YP_004261309.1 KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: uncharacterized protein YP_004261310.1 KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: uncharacterized protein YP_004261311.1 KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: uncharacterized protein YP_004261312.1 KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: uncharacterized protein YP_004261313.1 KEGG: fbc:FB2170_16611 hypothetical protein; SPTR: uncharacterized protein YP_004261314.1 COGs: COG3340 Peptidase E; InterPro IPR005320; KEGG: coc:Coch_0081 peptidase E; PFAM: Peptidase S51; PRIAM: Dipeptidase E; SPTR: Peptidase E; PFAM: Peptidase family S51 YP_004261315.1 KEGG: fbc:FB2170_16616 hypothetical protein; SPTR: uncharacterized protein YP_004261316.1 KEGG: fbc:FB2170_16621 hypothetical protein; SPTR: uncharacterized protein YP_004261317.1 KEGG: spw:SPCG_1750 cell wall surface anchor family protein; SPTR: uncharacterized protein YP_004261318.1 KEGG: fbc:FB2170_16641 hypothetical protein; SPTR: uncharacterized protein YP_004261319.1 KEGG: fbc:FB2170_16631 hypothetical protein; SPTR: uncharacterized protein YP_004261320.1 InterPro IPR000182; KEGG: cat:CA2559_09653 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family YP_004261321.1 COGs: COG1876 D-alanyl-D-alanine carboxypeptidase; InterPro IPR006311: IPR003709; KEGG: fbc:FB2170_16651 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; SPTR: D-alanyl-D-alanine carboxypeptidase; PFAM: D-alanyl-D-alanine carboxypeptidase YP_004261322.1 COGs: COG4783 Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_16656 hypothetical protein; PFAM: Peptidase M48; SPTR: uncharacterized protein; PFAM: Peptidase family M48 YP_004261323.1 KEGG: fbc:FB2170_16661 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004261324.1 InterPro IPR002110; KEGG: fbc:FB2170_16666 ankyrin; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Ankyrin; PFAM: Ankyrin repeat YP_004261325.1 COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995: IPR011258: IPR006124; KEGG: rbi:RB2501_02575 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004261326.1 COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467: IPR000994; KEGG: zpr:ZPR_0958 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_004261327.1 KEGG: fbc:FB2170_07454 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3667) YP_004261328.1 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: fjo:Fjoh_1761 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain YP_004261329.1 COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_16686 thiamine biosynthesis lipoprotein ApbE precursor; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Thiamine biosynthesis lipoprotein ApbE; PFAM: ApbE family YP_004261330.1 KEGG: rbi:RB2501_02600 Na(+)-translocating NADH-quinone reductase subunit F; SPTR: Na(+)-translocating NADH-quinone reductase subunit F YP_004261331.1 InterPro IPR002110; KEGG: fjo:Fjoh_2730 ankyrin; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Ankyrin; PFAM: Ankyrin repeat YP_004261332.1 InterPro IPR002110; KEGG: fjo:Fjoh_2730 ankyrin; PFAM: Ankyrin repeat; SPTR: Ankyrin; PFAM: Ankyrin repeat YP_004261333.1 COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205: IPR001041: IPR008333: IPR001433; KEGG: fbc:FB2170_16696 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase, FAD-binding domain; PRIAM: Ferredoxin--NAD(+) reductase; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit YP_004261334.1 COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR010967: IPR003667; KEGG: fbc:FB2170_16701 NADH:ubiquinone oxidoreductase, Na translocating, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YP_004261335.1 COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292: IPR003667; KEGG: fbc:FB2170_16706 NADH-ubiquinone oxidoreductase; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH-ubiquinone oxidoreductase; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YP_004261336.1 COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204: IPR007329; KEGG: fbc:FB2170_16711 Na(+)-translocating NADH-quinone reductase subunit C; PFAM: FMN-binding; SMART: FMN-binding; SPTR: Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YP_004261337.1 COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966: IPR004338; KEGG: fbc:FB2170_16716 Na(+)-translocating NADH-quinone reductase subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: NADH:ubiquinone oxidoreductase, subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YP_004261338.1 COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; InterPro IPR008703; KEGG: fbc:FB2170_16721 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit YP_004261339.1 KEGG: fbc:FB2170_16726 hypothetical protein; SPTR: uncharacterized protein YP_004261340.1 COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; InterPro IPR007474; KEGG: fbc:FB2170_16736 hypothetical protein; PFAM: ApaG domain; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF525) YP_004261341.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931: IPR015590; KEGG: fbc:FB2170_16741 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 YP_004261342.1 COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: fbc:FB2170_16746 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB YP_004261343.1 COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: fbc:FB2170_16751 linoleoyl-CoA desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Linoleoyl-CoA desaturase; SPTR: Linoleoyl-CoA desaturase; PFAM: Fatty acid desaturase YP_004261344.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: rbi:RB2501_02675 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II YP_004261345.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_04365 hypothetical protein; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; manually curated; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_004261346.1 KEGG: fbc:FB2170_15901 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3667) YP_004261347.1 COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: fbc:FB2170_10414 hypothetical protein; PFAM: YhhN-like; SPTR: uncharacterized protein; PFAM: YhhN-like protein YP_004261348.1 COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: cli:Clim_1026 protein of unknown function DUF399; PFAM: Domain of unknown function DUF399; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF399 YP_004261349.1 KEGG: fjo:Fjoh_2797 hypothetical protein; SPTR: uncharacterized protein YP_004261350.1 COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: fbc:FB2170_16761 potassium uptake protein; PFAM: Cation transporter; SPTR: potassium uptake protein; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_004261351.1 COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: rbi:RB2501_02685 potassium transporter peripheral membrane component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: potassium uptake protein; PFAM: TrkA-N domain; TrkA-C domain YP_004261352.1 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: fbc:FB2170_16771 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_004261353.1 KEGG: fbc:FB2170_16776 PorT protein; SPTR: PorT protein YP_004261354.1 COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537; KEGG: fbc:FB2170_16781 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: tRNA/rRNA methyltransferase; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding YP_004261355.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fbc:FB2170_16786 hypothetical protein; PFAM: Bacterial surface antigen (D15); SPTR: uncharacterized protein; PFAM: Surface antigen YP_004261356.1 COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411: IPR000771; KEGG: fbc:FB2170_16791 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: Fructose-bisphosphate aldolase; TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YP_004261357.1 COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; InterPro IPR000438: IPR000022; KEGG: fbc:FB2170_16796 acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_004261358.1 COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290: IPR000589; KEGG: fbc:FB2170_16806 30S ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_004261359.1 COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162: IPR004087: IPR022967: IPR001247: IPR 015847: IPR015848: IPR018111: IPR003029; KEGG: cat:CA2559_12288 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_004261360.1 InterPro IPR002035; KEGG: xtr:734132 inter-alpha (globulin) inhibitor H2; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: uncharacterized protein MGC107982; PFAM: von Willebrand factor type A domain YP_004261361.1 COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304: IPR004455; KEGG: gfo:GFO_1961 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_004261362.1 COGs: COG0263 Glutamate 5-kinase; InterPro IPR001048; KEGG: zpr:ZPR_2278 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Glutamate 5-kinase; SPTR: Glutamate 5-kinase; PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_004261363.1 COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965; KEGG: cat:CA2559_12653 hypothetical protein; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: uncharacterized protein; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_004261364.1 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_0015 hyaluronan synthase; PFAM: Glycosyl transferase, family 2; PRIAM: Hyaluronan synthase; SPTR: Hyaluronan synthase; PFAM: Glycosyl transferase family 2 YP_004261365.1 COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284: IPR009042: IPR007627: IPR007624: IPR 007630; KEGG: rbi:RB2501_02735 sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: sigma factor A; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004261366.1 KEGG: fjo:Fjoh_0117 hypothetical protein; SPTR: Hypothetical lipoprotein YP_004261367.1 KEGG: fbc:FB2170_08984 hypothetical protein; SPTR: uncharacterized protein YP_004261368.1 InterPro IPR003367; KEGG: rbi:RB2501_09320 hypothetical protein; SPTR: uncharacterized protein YP_004261369.1 KEGG: rbi:RB2501_09315 hypothetical protein; SPTR: uncharacterized protein YP_004261370.1 InterPro IPR012944; KEGG: bvu:BVU_1853 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; PFAM: SusD family YP_004261371.1 InterPro IPR012910: IPR000531; KEGG: bvu:BVU_1847 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261372.1 KEGG: bvu:BVU_1853 hypothetical protein; SPTR: uncharacterized protein; PFAM: SusD family YP_004261373.1 InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2844 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261374.1 InterPro IPR012944; KEGG: coc:Coch_0536 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004261375.1 KEGG: zpr:ZPR_0685 outer membrane protein probably involved in nutrient binding; SPTR: outer membrane protein probably involved in nutrient binding; PFAM: SusD family YP_004261376.1 InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_0684 outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261377.1 COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: fbc:FB2170_08979 ribonuclease HII; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease HII; PFAM: Ribonuclease HII YP_004261378.1 KEGG: fbc:FB2170_08974 ribonuclease HII; SPTR: Ribonuclease HII YP_004261379.1 KEGG: fbc:FB2170_08969 hypothetical protein; SPTR: uncharacterized protein YP_004261380.1 COGs: COG0321 Lipoate-protein ligase B; HAMAP: Octanoyltransferase; InterPro IPR000544: IPR004143; KEGG: fbc:FB2170_08964 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: Octanoyltransferase; TIGRFAM: Octanoyltransferase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_004261381.1 KEGG: cat:CA2559_05515 hypothetical protein; SPTR: Ric1 protein; PFAM: Uncharacterized protein family UPF0057 YP_004261382.1 COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313: IPR004365: IPR004364; KEGG: cat:CA2559_05510 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_004261383.1 COGs: COG4682 membrane protein; InterPro IPR008024; KEGG: cpi:Cpin_3478 YiaAB two helix domain protein; PFAM: YiaAB two helix; SPTR: uncharacterized protein; PFAM: yiaA/B two helix domain YP_004261384.1 KEGG: cpi:Cpin_3479 hypothetical protein; SPTR: uncharacterized protein YP_004261385.1 COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: fbc:FB2170_08919 anion transporter; PFAM: Sodium/sulphate symporter; SPTR: Anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter YP_004261386.1 KEGG: cat:CA2559_05500 hypothetical protein; SPTR: uncharacterized protein YP_004261387.1 KEGG: fbc:FB2170_08904 hypothetical protein; SPTR: uncharacterized protein YP_004261388.1 KEGG: fbc:FB2170_08899 hypothetical protein; SPTR: uncharacterized protein YP_004261389.1 COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; InterPro IPR004639: IPR005814; KEGG: fbc:FB2170_08894 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_004261390.1 COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR013338: IPR002482: IPR002901: IPR018392; KEGG: fbc:FB2170_08889 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme domain, subfamily 2; Peptidoglycan-binding Lysin subgroup; SPTR: Hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain YP_004261391.1 COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: fbc:FB2170_08884 D-cysteine desulfhydrase (DcyD); SPTR: D-cysteine desulfhydrase (DcyD); PFAM: Pyridoxal-phosphate dependent enzyme YP_004261392.1 KEGG: fbc:FB2170_08879 hypothetical protein; SPTR: uncharacterized protein YP_004261393.1 KEGG: gfo:GFO_0236 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004261394.1 KEGG: fbc:FB2170_08869 hypothetical protein; SPTR: uncharacterized protein YP_004261395.1 COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: rbi:RB2501_09225 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal; PRIAM: Phenylalanine 4-monooxygenase; SPTR: uncharacterized protein; PFAM: Biopterin-dependent aromatic amino acid hydroxylase YP_004261396.1 KEGG: zpr:ZPR_0790 hypothetical protein; SPTR: uncharacterized protein YP_004261397.1 InterPro IPR014982; KEGG: fbc:FB2170_08849 hypothetical protein; PFAM: GSCFA; SPTR: uncharacterized protein; PFAM: GSCFA family YP_004261398.1 COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR002318: IPR012947: IPR018164: IPR003156; KEGG: fbc:FB2170_08839 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_004261399.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: rbi:RB2501_09205 peptidase; PFAM: Peptidase M23; SPTR: peptidase; PFAM: Peptidase family M23 YP_004261400.1 InterPro IPR000551; KEGG: fbc:FB2170_08829 transcriptional regulator protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: transcriptional regulator protein; PFAM: MerR family regulatory protein YP_004261401.1 COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: fbc:FB2170_08824 LemA protein; PFAM: LemA; SPTR: LemA protein; PFAM: LemA family YP_004261402.1 COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: fbc:FB2170_08819 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF477) YP_004261403.1 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: fbc:FB2170_08814 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF477) YP_004261404.1 KEGG: cat:CA2559_03085 hypothetical protein; SPTR: uncharacterized protein YP_004261405.1 COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: rbi:RB2501_12422 glycerate kinase; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: Glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_004261406.1 COGs: COG0591 Na+/proline symporter; InterPro IPR019900: IPR001734; KEGG: pat:Patl_0335 SSS family solute/sodium (Na+) symporter; PFAM: Sodium/solute symporter; SPTR: integral membrane transport protein; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_004261407.1 COGs: COG1626 Neutral trehalase; InterPro IPR001661; KEGG: pmx:PERMA_0011 hypothetical protein; PFAM: Glycoside hydrolase, family 37; SPTR: uncharacterized protein; PFAM: Trehalase YP_004261408.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: amc:MADE_03378 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261409.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: cat:CA2559_01255 LacI-family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: LacI-family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family YP_004261410.1 COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR005225: IPR016484: IPR002917; KEGG: fbc:FB2170_08809 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein EngA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_004261411.1 KEGG: fbc:FB2170_08804 GTP-binding protein EngA; SPTR: uncharacterized protein YP_004261412.1 KEGG: paa:Paes_2207 alkaline phosphatase; SPTR: uncharacterized protein YP_004261413.1 KEGG: coc:Coch_1060 hypothetical protein; SPTR: uncharacterized protein YP_004261414.1 COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR005225: IPR005662: IPR002917: IPR004044; KEGG: fbc:FB2170_08799 GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_004261415.1 COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: has:Halsa_2086 Na+/H+ antiporter NhaC-like protein; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Na+/H+ antiporter, ; PFAM: Na+/H+ antiporter family YP_004261416.1 KEGG: apr:Apre_0661 SMC domain protein; SPTR: SMC domain protein YP_004261417.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cpi:Cpin_5404 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain YP_004261418.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bmd:BMD_0794 major facilitator family transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator family transporter; PFAM: Major Facilitator Superfamily YP_004261419.1 COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: fjo:Fjoh_1817 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Pyrrolo-quinoline quinone; PFAM: PQQ enzyme repeat YP_004261420.1 COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: dfe:Dfer_2590 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase YP_004261421.1 KEGG: cat:CA2559_01460 cell wall associated biofilm protein; SPTR: Cell wall associated biofilm protein YP_004261422.1 KEGG: ecb:100071662 hypothetical LOC100071662; SPTR: Rab GTPase activating protein YP_004261423.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR011123: IPR010559: IPR003594; KEGG: cpi:Cpin_1400 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Two component regulator three Y; ATPase-like, ATP-binding domain; SPTR: Possible sensor protein; PFAM: Y_Y_Y domain; Histidine kinase YP_004261424.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: cpi:Cpin_0671 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004261425.1 InterPro IPR013097; KEGG: cak:Caul_1100 hemolysin-type calcium-binding region; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: Hemolysin-type calcium-binding region; PFAM: Stress responsive A/B Barrel Domain YP_004261426.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fba:FIC_02561 protein containing DUF336; PFAM: Domain of unknown function DUF336; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF336) YP_004261427.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dfe:Dfer_0358 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding-regulatory protein; PFAM: Cyclic nucleotide-binding domain YP_004261428.1 COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357: IPR005101; KEGG: cpi:Cpin_7174 deoxyribodipyrimidine photolyase-related protein; PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: uncharacterized protein; PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein YP_004261429.1 InterPro IPR017136; KEGG: fph:Fphi_0460 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037205; SPTR: uncharacterized protein; manually curated; PFAM: Uncharacterized protein conserved in bacteria (DUF2256) YP_004261430.1 COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: zpr:ZPR_0756 hypothetical protein; PFAM: Protein of unknown function DUF980; SPTR: uncharacterized protein; PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator YP_004261431.1 COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: rrs:RoseRS_0011 deoxyribodipyrimidine photolyase-like protein; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: uncharacterized protein; PFAM: FAD binding domain of DNA photolyase YP_004261432.1 KEGG: cat:CA2559_12603 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2452) YP_004261433.1 InterPro IPR004039; KEGG: fjo:Fjoh_4634 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin YP_004261434.1 COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963: IPR006656: IPR006657: IPR013027: IPR 007419; KEGG: fjo:Fjoh_4633 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; PRIAM: Nitrate reductase, Nitrite reductase (NAD(P)H); SMART: Molybdopterin oxidoreductase, Fe4S4 domain; SPTR: Assimilatory nitrate reductase (NADH) beta subunit / assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_004261435.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: fjo:Fjoh_4628 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004261436.1 KEGG: fbc:FB2170_14903 hypothetical protein; SPTR: uncharacterized protein YP_004261437.1 COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR005890: IPR003593: IPR003439; KEGG: chu:CHU_1966 ABC type nitrate transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC type nitrate transporter, ATP-binding protein; TIGRFAM: Nitrate transport ATP-binding subunit C/D; PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D YP_004261438.1 COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: chu:CHU_1967 ABC-type nitrate transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type nitrate transporter, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D YP_004261439.1 COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: chu:CHU_1968 nitrate ABC transporter, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, permease component; PFAM: Binding-protein-dependent transport system inner membrane component YP_004261440.1 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: chu:CHU_1969 ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein; SPTR: ABC-type nitrate/sulfonate/taurine/bicarbonate transporter, substrate binding protein; PFAM: NMT1/THI5 like YP_004261441.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808; KEGG: chu:CHU_1971 transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; SPTR: Transcriptional regulator; PFAM: Cyclic nucleotide-binding domain YP_004261442.1 COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366: IPR000878; KEGG: fjo:Fjoh_1505 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrinogen-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_004261443.1 COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR012744: IPR013027: IPR007419: IPR005117: IPR 006067; KEGG: fjo:Fjoh_4624 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S domain; PRIAM: Nitrite reductase (NAD(P)H); SPTR: NAD(P)H-nitrite reductase, large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_004261444.1 COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR012748: IPR017941; KEGG: fjo:Fjoh_4625 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase (NAD(P)H) large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_004261445.1 KEGG: fjo:Fjoh_4626 hypothetical protein; SPTR: uncharacterized protein YP_004261446.1 COGs: COG4585 Signal transduction histidine kinase; InterPro IPR000014: IPR003594: IPR011712; KEGG: fjo:Fjoh_4627 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; SPTR: uncharacterized protein; TIGRFAM: PAS; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_004261447.1 KEGG: fbc:FB2170_04025 hypothetical protein; SPTR: uncharacterized protein YP_004261448.1 COGs: COG2103 sugar phosphate isomerase; InterPro IPR001347; KEGG: fbc:FB2170_09791 hypothetical protein; PFAM: Sugar isomerase (SIS); SPTR: uncharacterized protein; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_004261449.1 COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR014036; KEGG: fbc:FB2170_09786 transcriptional regulator, DeoR family protein; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family protein; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004261450.1 InterPro IPR012910: IPR000531; KEGG: bfs:BF0381 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261451.1 InterPro IPR012944; KEGG: phe:Phep_4138 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: lipoprotein; PFAM: SusD family YP_004261452.1 COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: phe:Phep_1349 protein of unknown function DUF187; PFAM: Protein of unknown function DUF187; SPTR: uncharacterized protein; PFAM: Uncharacterised BCR, COG1649 YP_004261453.1 COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: sli:Slin_1598 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium/iodide co-transporter; PFAM: Sodium:solute symporter family YP_004261454.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR001466; KEGG: zpr:ZPR_4696 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylglucosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase YP_004261455.1 InterPro IPR003591: IPR001611; KEGG: fbc:FB2170_08714 hypothetical protein; SPTR: uncharacterized protein; PFAM: Leucine Rich Repeat YP_004261456.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439; KEGG: fbc:FB2170_08709 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004261457.1 KEGG: fbc:FB2170_08704 hypothetical protein; SPTR: uncharacterized protein YP_004261458.1 COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_08699 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: uncharacterized protein; PFAM: FAD dependent oxidoreductase YP_004261459.1 InterPro IPR019847; KEGG: fbc:FB2170_08694 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility associated protein GldN; TIGRFAM: gliding motility associated protien GldN YP_004261460.1 InterPro IPR019859; KEGG: fbc:FB2170_08689 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility-associated protein GldM; PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM YP_004261461.1 InterPro IPR019852; KEGG: fbc:FB2170_08684 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldL; TIGRFAM: gliding motility-associated protein GldL YP_004261462.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR019866: IPR005532; KEGG: fbc:FB2170_08679 lipoprotein, PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, ; TIGRFAM: Gliding motility-associated lipoprotein GldK; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK YP_004261463.1 InterPro IPR006035; KEGG: fbc:FB2170_08674 hypothetical protein; PFAM: Ureohydrolase; SPTR: uncharacterized protein; PFAM: Arginase family YP_004261464.1 COGs: COG0550 Topoisomerase IA; InterProIPR005733: IPR006171: IPR003601: IPR003602: IPR 013497; KEGG: fbc:FB2170_08669 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_004261465.1 InterPro IPR013211; KEGG: fbc:FB2170_08654 hypothetical protein; PFAM: LVIVD; SPTR: uncharacterized protein; PFAM: LVIVD repeat YP_004261466.1 KEGG: cat:CA2559_00710 hypothetical protein; SPTR: uncharacterized protein YP_004261467.1 COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR005839: IPR006463: IPR006638: IPR013848: IPR 007197: IPR002792; KEGG: zpr:ZPR_4153 tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family YP_004261468.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593: IPR002078: IPR002197; KEGG: fbc:FB2170_08614 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_004261469.1 KEGG: fbc:FB2170_08609 hypothetical protein; SPTR: uncharacterized protein YP_004261470.1 KEGG: fbc:FB2170_08604 hypothetical protein; SPTR: uncharacterized protein YP_004261471.1 InterPro IPR004692; KEGG: rbi:RB2501_08965 hypothetical protein; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_004261472.1 COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10; InterPro IPR020818; KEGG: fbc:FB2170_08594 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit YP_004261473.1 COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: Chaperonin Cpn60; InterPro IPR001844: IPR002423; KEGG: rbi:RB2501_08955 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_004261474.1 KEGG: fbc:FB2170_08584 metal transport-related, exported protein; SPTR: metal transport-related, exported protein; PFAM: Heavy-metal-associated domain YP_004261475.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR000531; KEGG: fbc:FB2170_08579 TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261476.1 KEGG: fbc:FB2170_08569 hypothetical protein; SPTR: uncharacterized protein YP_004261477.1 COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: fbc:FB2170_08564 hypothetical protein; PFAM: GAF; SPTR: uncharacterized protein; PFAM: GAF domain YP_004261478.1 COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607: IPR013982; KEGG: fbc:FB2170_08559 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; SPTR: Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004261479.1 COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: rbi:RB2501_08940 rod shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Cell shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_004261480.1 COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: fbc:FB2170_08549 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_004261481.1 InterPro IPR007227; KEGG: fbc:FB2170_08544 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Cell shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_004261482.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460; KEGG: fbc:FB2170_08539 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_004261483.1 COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_08534 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; PFAM: Cell cycle protein YP_004261484.1 COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604: IPR020821; KEGG: fbc:FB2170_08529 endonuclease precursor; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: Endonuclease; PFAM: DNA/RNA non-specific endonuclease YP_004261485.1 KEGG: fbc:FB2170_01796 hypothetical protein; SPTR: uncharacterized protein YP_004261486.1 COGs: COG0793 Periplasmic protease; InterPro IPR004447: IPR001478: IPR005151; KEGG: rbi:RB2501_08900 periplasmic tail-specific proteinase; PFAM: Peptidase S41; PDZ/DHR/GLGF; PRIAM: C-terminal processing peptidase; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Periplasmic tail-specific proteinase; TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_004261487.1 COGs: COG0496 acid phosphatase; HAMAP: Survival protein SurE-like phosphatase/nucleotidase; InterPro IPR002828; KEGG: fbc:FB2170_08489 acid phosphatase; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_004261488.1 KEGG: fbc:FB2170_08484 hypothetical protein; SPTR: uncharacterized protein YP_004261489.1 COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: fbc:FB2170_08479 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_004261490.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: fbc:FB2170_08474 hypothetical protein; PFAM: NLP/P60; SPTR: uncharacterized protein; PFAM: NlpC/P60 family YP_004261491.1 COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: fbc:FB2170_08469 competence protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein YP_004261492.1 COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR014036; KEGG: zpr:ZPR_0765 transcriptional regulator, GlpR family protein; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, GlpR family protein; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_004261493.1 COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: zpr:ZPR_0766 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004261494.1 COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR005999: IPR018484: IPR018485; KEGG: zpr:ZPR_0767 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_004261495.1 COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: zpr:ZPR_0768 glycerol diffusion channel; PFAM: Major intrinsic protein; SPTR: glycerol diffusion channel; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_004261496.1 COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR005279: IPR000109; KEGG: rbi:RB2501_08870 proton/peptide symporter family protein; PFAM: Oligopeptide transporter; SPTR: Proton/peptide symporter family protein; TIGRFAM: Amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_004261497.1 COGs: COG1257 Hydroxymethylglutaryl-CoA reductase; InterPro IPR004553; KEGG: fbc:FB2170_08454 hydroxymethylglutaryl CoA reductase; PRIAM: Hydroxymethylglutaryl-CoA reductase; SPTR: Hydroxymethylglutaryl CoA reductase; TIGRFAM: Hydroxymethylglutaryl-CoA reductase, bacterial type; PFAM: Hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative YP_004261498.1 KEGG: fbc:FB2170_08449 hypothetical protein; SPTR: uncharacterized protein YP_004261499.1 InterPro IPR000297; KEGG: fbc:FB2170_08444 peptidylprolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: Peptidylprolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain YP_004261500.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170; KEGG: fbc:FB2170_08439 transmembrane CBS domain transporter; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: transmembrane CBS domain transporter; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_004261501.1 KEGG: fbc:FB2170_08434 hypothetical protein; SPTR: uncharacterized protein YP_004261502.1 InterPro IPR010664; KEGG: fbc:FB2170_08429 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1239) YP_004261503.1 KEGG: rbi:RB2501_08830 TPR domain protein; SPTR: TPR domain protein YP_004261504.1 KEGG: fbc:FB2170_08419 outer membrane protein; SPTR: outer membrane protein YP_004261505.1 COGs: COG1521 transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: fbc:FB2170_08414 regulatory protein; PFAM: Type III pantothenate kinase; PRIAM: Pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_004261506.1 InterPro IPR000305; KEGG: zpr:ZPR_0151 protein containing GIY-YIG catalytic domain; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Protein containing GIY-YIG catalytic domain; PFAM: GIY-YIG catalytic domain YP_004261507.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fbc:FB2170_08404 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: uncharacterized protein; PFAM: Rhodanese-like domain YP_004261508.1 COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_05025 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2064) YP_004261509.1 COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR000845; KEGG: fbc:FB2170_08394 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase; TIGRFAM: Inosine guanosine/xanthosine phosphorylase; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family YP_004261510.1 InterPro IPR006869; KEGG: gfo:GFO_3612 secreted protein containing DUF547; PFAM: Domain of unknown function DUF547; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF547 YP_004261511.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_08374 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2 YP_004261512.1 COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: fbc:FB2170_08369 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase YP_004261513.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; KEGG: fbc:FB2170_08359 outer membrane surface antigen protein; SPTR: Outer membrane surface antigen protein; manually curated YP_004261514.1 KEGG: fbc:FB2170_08354 hypothetical protein; SPTR: uncharacterized protein YP_004261515.1 KEGG: fbc:FB2170_08349 hypothetical protein; SPTR: uncharacterized protein YP_004261516.1 KEGG: fbc:FB2170_08344 hypothetical protein; SPTR: uncharacterized protein YP_004261517.1 InterPro IPR006869; KEGG: fbc:FB2170_08339 hypothetical protein; PFAM: Domain of unknown function DUF547; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF547 YP_004261518.1 COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: fbc:FB2170_08334 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Rubredoxin--NAD(+) reductase; SPTR: NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004261519.1 COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: fbc:FB2170_08329 pyridine nucleotide-disulphide oxidoreductase domain protein; PFAM: 4Fe-4S binding domain; SPTR: Pyridine nucleotide-disulphide oxidoreductase domain protein YP_004261520.1 COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: fbc:FB2170_08324 hypothetical exported 24-amino acid repeat protein; PFAM: MORN variant; SPTR: Hypothetical exported 24-amino acid repeat protein; PFAM: MORN repeat variant YP_004261521.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_08319 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2 YP_004261522.1 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rbi:RB2501_08720 glycosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Glucomannan 4-beta-mannosyltransferase; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004261523.1 KEGG: fbc:FB2170_08309 hypothetical protein; SPTR: uncharacterized protein YP_004261524.1 InterPro IPR000182; KEGG: rbi:RB2501_08710 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein YP_004261525.1 COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518; KEGG: fbc:FB2170_08294 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_004261526.1 COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; InterPro IPR000706: IPR000534: IPR012280; KEGG: fbc:FB2170_08289 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_004261527.1 COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304: IPR004455; KEGG: fbc:FB2170_08284 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_004261528.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_08279 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; PFAM: Aminotransferase class-III YP_004261529.1 COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132: IPR006131; KEGG: fbc:FB2170_08264 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: N-acetylornithine carbamoyltransferase; SPTR: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YP_004261530.1 COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662: IPR001048; KEGG: fbc:FB2170_08254 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_004261531.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: fbc:FB2170_08249 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Succinyl-diaminopimelate desuccinylase; SPTR: Acetylornithine deacetylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_004261532.1 COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR009049: IPR022761; KEGG: fbc:FB2170_08244 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_004261533.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942; KEGG: fbc:FB2170_08234 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Ribosomal large subunit pseudouridine synthase B; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_004261534.1 KEGG: coc:Coch_1247 hypothetical protein; SPTR: uncharacterized protein YP_004261535.1 KEGG: erg:ERGA_CDS_05290 hypothetical protein; SPTR: uncharacterized protein orf471 YP_004261536.1 KEGG: cbi:CLJ_B2038 tyrosine recombinase XerD; SPTR: Tyrosine recombinase XerD YP_004261537.1 KEGG: cpy:Cphy_0586 hypothetical protein; SPTR: uncharacterized protein YP_004261538.1 KEGG: pbe:PB000250.01.0 hypothetical protein; SPTR: uncharacterized protein YP_004261539.1 COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_08229 hydrolase, carbon-nitrogen family protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PRIAM: Nitrilase; SPTR: Hydrolase, carbon-nitrogen family protein; PFAM: Carbon-nitrogen hydrolase YP_004261540.1 COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: fbc:FB2170_08224 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: uncharacterized protein; PFAM: UbiA prenyltransferase family YP_004261541.1 COGs: COG1577 Mevalonate kinase; InterPro IPR006204; KEGG: fbc:FB2170_08219 hypothetical protein; PFAM: GHMP kinase; SPTR: uncharacterized protein YP_004261542.1 COGs: COG3407 Mevalonate pyrophosphate decarboxylase; InterPro IPR005935: IPR006204; KEGG: fbc:FB2170_08214 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; SPTR: Mevalonate diphosphate decarboxylase; TIGRFAM: Diphosphomevalonate decarboxylase; TIGRFAM: diphosphomevalonate decarboxylase YP_004261543.1 COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: fbc:FB2170_08199 hypothetical protein; PFAM: Protein of unknown function DUF1697; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1697) YP_004261544.1 COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: fbc:FB2170_08194 HI0933-like protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: HI0933-like protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_004261545.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: fbc:FB2170_08189 glcerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glcerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family YP_004261546.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: fbc:FB2170_08169 LacI-family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family YP_004261547.1 InterPro IPR019734: IPR001440; KEGG: fbc:FB2170_03595 TPR repeat protein:HAT (Half-A-TPR) repeat; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: TPR repeat protein:HAT (Half-A-TPR) repeat YP_004261548.1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR006260: IPR008756; KEGG: fbc:FB2170_03600 TonB; PFAM: Peptidase M56, BlaR1; SPTR: TonB; TIGRFAM: TonB, C-terminal; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_004261549.1 InterPro IPR006260: IPR008756; KEGG: fbc:FB2170_03600 TonB; PFAM: Peptidase M56, BlaR1; SPTR: TonB; TIGRFAM: TonB, C-terminal; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_004261550.1 COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_03605 antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor YP_004261551.1 COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: fbc:FB2170_03610 hypothetical protein; PFAM: Protein of unknown function DUF456; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF456) YP_004261552.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: pmx:PERMA_1766 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase, M28 family; PFAM: Peptidase family M28 YP_004261553.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: rbi:RB2501_04095 hypothetical protein; PFAM: Nitroreductase-like; SPTR: uncharacterized protein; PFAM: Nitroreductase family YP_004261554.1 KEGG: mfl:Mfl657 unknown transmembrane protein; SPTR: uncharacterized protein YP_004261555.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: fbc:FB2170_03615 als operon regulatory protein AlsR, PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Als operon regulatory protein AlsR, ; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_004261556.1 COGs: COG2986 Histidine ammonia-lyase; InterPro IPR005921: IPR001106; KEGG: fbc:FB2170_03620 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase YP_004261557.1 COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR005920: IPR006680; KEGG: fbc:FB2170_03625 imidazolonepropionase; PFAM: Amidohydrolase 1; PRIAM: Imidazolonepropionase; SPTR: Imidazolonepropionase; TIGRFAM: Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase YP_004261558.1 COGs: COG2987 Urocanate hydratase; InterPro IPR000193; KEGG: fbc:FB2170_03630 urocanate hydratase; PFAM: Urocanase; PRIAM: Urocanate hydratase; SPTR: Urocanate hydratase; TIGRFAM: Urocanase; PFAM: Urocanase; TIGRFAM: urocanate hydratase YP_004261559.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746: IPR013766; KEGG: fbc:FB2170_03945 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_004261560.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fjo:Fjoh_1348 peptidase M1, membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Membrane alanyl aminopeptidase; SPTR: Peptidase family M1; PFAM: Peptidase family M1; Domain of unknown function (DUF3358) YP_004261561.1 COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_03940 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF58 YP_004261562.1 COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: fjo:Fjoh_3419 hypothetical protein; PFAM: Protein of unknown function DUF808; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF808) YP_004261563.1 InterPro IPR001387: IPR013096; KEGG: dfe:Dfer_3096 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix YP_004261564.1 COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593: IPR003439; KEGG: dae:Dtox_3449 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type sulfate transport system, ATPase component; PFAM: ABC transporter YP_004261565.1 COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR006469: IPR000515; KEGG: mmp:MMP0506 NifC-like ABC-type porter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type molybdate transport system, permease component; TIGRFAM: NifC-like ABC-type porter; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: NifC-like ABC-type porter YP_004261566.1 COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950: IPR006059; KEGG: mhu:Mhun_1334 molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_004261567.1 COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; HAMAP: Formiminoglutamase; InterPro IPR005923: IPR006035; KEGG: fbc:FB2170_03650 formiminoglutamase; PFAM: Ureohydrolase; PRIAM: Formimidoylglutamase; SPTR: Formimidoylglutamase; TIGRFAM: Formiminoglutamase; PFAM: Arginase family; TIGRFAM: formimidoylglutamase YP_004261568.1 COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: fbc:FB2170_03660 homogentisate 1,2-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase; SPTR: Homogentisate 1,2-dioxygenase; PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase YP_004261569.1 KEGG: rbi:RB2501_04205 hypothetical protein; SPTR: uncharacterized protein; PFAM: Nucleotidyl transferase YP_004261570.1 InterPro IPR002575; KEGG: fbc:FB2170_03845 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SPTR: uncharacterized protein; PFAM: Phosphotransferase enzyme family YP_004261571.1 COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: fbc:FB2170_16826 RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family, group 2; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, , group 2 YP_004261572.1 COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691: IPR020573: IPR001451; KEGG: fjo:Fjoh_2551 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004261573.1 KEGG: dfe:Dfer_4650 hypothetical protein; SPTR: uncharacterized protein YP_004261574.1 KEGG: fps:FP0273 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3050) YP_004261575.1 InterPro IPR000620; KEGG: fjo:Fjoh_0861 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; PFAM: EamA-like transporter family YP_004261576.1 KEGG: rbi:RB2501_08455 hypothetical protein; SPTR: uncharacterized protein YP_004261577.1 COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: abb:ABBFA_001369 hypothetical protein; SMART: ATPase, AAA+ type, core; SPTR: Exonuclease V subunit alpha; PFAM: PIF1 helicase YP_004261578.1 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: ant:Arnit_0838 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF477) YP_004261579.1 COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_07894 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; PRIAM: Glutaryl-7-aminocephalosporanic-acid acylase; SPTR: Penicillin amidase; PFAM: Penicillin amidase YP_004261580.1 COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593: IPR001140: IPR003439; KEGG: fbc:FB2170_07889 ABC transporter ATP-binding and permease; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding and permease; PFAM: ABC transporter transmembrane region; ABC transporter YP_004261581.1 InterPro IPR001041; KEGG: rbi:RB2501_08445 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_004261582.1 COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR022890: IPR013027; KEGG: zpr:ZPR_0507 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004261583.1 COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: fbc:FB2170_07884 nitrogen-fixing NifU-like protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU-like protein; PFAM: NifU-like domain YP_004261584.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: fbc:FB2170_07879 hypothetical protein; PFAM: ATPase-like, ParA/MinD; SPTR: uncharacterized protein; PFAM: ParA/MinD ATPase like; ATPase MipZ YP_004261585.1 COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_07819 6-O-methylguanine DNA methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Probable methylated DNA-protein cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_004261586.1 KEGG: fbc:FB2170_07814 hypothetical protein; SPTR: uncharacterized protein; PFAM: LysE type translocator YP_004261587.1 COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; InterPro IPR003358; KEGG: zpr:ZPR_0502 methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_004261588.1 InterPro IPR007235; KEGG: fjo:Fjoh_0541 hypothetical protein; PFAM: Glycosyl transferase, family 28, C-terminal; SPTR: uncharacterized protein; PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: conserved hypothetical protein YP_004261589.1 COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: rbi:RB2501_08410 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004261590.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fbc:FB2170_07794 response regulator DrrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Response regulator DrrA; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_004261591.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_0545 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; Cna protein B-type domain; TIGRFAM: TonB-dependent receptor YP_004261592.1 InterPro IPR006626; KEGG: rbi:RB2501_05650 hypothetical protein; SPTR: uncharacterized protein YP_004261593.1 KEGG: rbi:RB2501_08400 hypothetical protein; SPTR: uncharacterized protein YP_004261594.1 KEGG: fbc:FB2170_07784 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004261595.1 KEGG: fbc:FB2170_07779 possible acyl protein synthase/acyl-CoA reductase-like protein; SPTR: Acyl protein synthase/acyl-CoA reductase-like protein; PFAM: Acyl-protein synthetase, LuxE YP_004261596.1 KEGG: rbi:RB2501_08245 hypothetical protein; SPTR: uncharacterized protein YP_004261597.1 COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR004597: IPR005019; KEGG: fbc:FB2170_07654 3-methyladenine DNA glycosylase; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_004261598.1 KEGG: cpi:Cpin_3450 hypothetical protein; SPTR: uncharacterized protein YP_004261599.1 COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: cpi:Cpin_4169 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: AP superfamily protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_004261600.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dtu:Dtur_1814 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding protein; PFAM: Cyclic nucleotide-binding domain YP_004261601.1 KEGG: fbc:FB2170_07669 hypothetical protein; SPTR: uncharacterized protein YP_004261602.1 KEGG: fbc:FB2170_07674 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: TonB family C-terminal domain YP_004261603.1 COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780: IPR002501; KEGG: fbc:FB2170_07679 tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_004261604.1 COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Bacitracin resistance protein BacA; InterPro IPR003824; KEGG: fps:FP2358 undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; TIGRFAM: Bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_004261605.1 KEGG: fbc:FB2170_07689 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3098) YP_004261606.1 COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: fbc:FB2170_07694 cell division protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: cell division protein; PFAM: Predicted permease YP_004261607.1 KEGG: fjo:Fjoh_0127 hypothetical protein; SPTR: uncharacterized protein YP_004261608.1 COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR015413: IPR002300: IPR013155: IPR002302; KEGG: cat:CA2559_04530 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); Aminoacyl-tRNA synthetase, class Ia; PRIAM: Leucine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_004261609.1 COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886: IPR007698: IPR008141; KEGG: rbi:RB2501_08320 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: Alanine dehydrogenase; SPTR: alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_004261610.1 COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: rbi:RB2501_08325 hypothetical protein; PFAM: Peptidase, membrane zinc metallopeptidase, SPTR: uncharacterized protein; PFAM: neutral zinc metallopeptidase YP_004261611.1 KEGG: zpr:ZPR_1583 hypothetical protein; SPTR: uncharacterized protein YP_004261612.1 COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: zpr:ZPR_1580 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004261613.1 KEGG: zpr:ZPR_1579 hypothetical protein; SPTR: uncharacterized protein YP_004261614.1 KEGG: zpr:ZPR_1578 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004261615.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019887: IPR019888; KEGG: fbc:FB2170_07719 AsnC-family transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: AsnC-family transcriptional regulatory protein; PFAM: AsnC family YP_004261616.1 COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: fbc:FB2170_07724 saccharopine dehydrogenase, PFAM: Saccharopine dehydrogenase / Homospermidine synthase; PRIAM: Saccharopine dehydrogenase (NADP(+), L-lysine-forming); SPTR: Saccharopine dehydrogenase, ; PFAM: Saccharopine dehydrogenase YP_004261617.1 COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_07729 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF423) YP_004261618.1 COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase, ATP-utilising; InterPro IPR001272; KEGG: fbc:FB2170_07734 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004261619.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR014940; KEGG: gau:GAU_3485 hypothetical protein; PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; SPTR: uncharacterized protein; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal YP_004261620.1 InterPro IPR011493; KEGG: cts:Ctha_1865 filamentous haemagglutinin family outer membrane protein; SPTR: Filamentous haemagglutinin family outer membrane protein YP_004261621.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: fjo:Fjoh_0180 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004261622.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bsb:Bresu_2111 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily YP_004261623.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: ddf:DEFDS_0906 AhpC/Tsa family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family YP_004261624.1 KEGG: vap:Vapar_5238 DoxX family protein; SPTR: uncharacterized protein YP_004261625.1 KEGG: dat:HRM2_26640 metalloendopeptidase; cell wall-binding protein associated metalloendopeptidase; SPTR: metalloendopeptidase; cell wall-binding protein associated metalloendopeptidase YP_004261626.1 KEGG: ptm:GSPATT00035945001 hypothetical protein; SPTR: Chromosome undetermined scaffold_156, whole genome shotgun sequence YP_004261627.1 KEGG: lpa:lpa_00483 transcriptional regulator; SPTR: Transcriptional regulator YP_004261628.1 KEGG: vpa:VPA0458 hypothetical protein; SPTR: Amidophosphoribosyltransferase YP_004261629.1 KEGG: scb:SCAB_4621 hypothetical protein; SPTR: uncharacterized protein YP_004261630.1 KEGG: csc:Csac_1899 peptidase S55, SpoIVB; SPTR: Rod shape-determining protein MreC, subtype YP_004261631.1 KEGG: ptm:GSPATT00014173001 hypothetical protein; SPTR: Chromosome undetermined scaffold_40, whole genome shotgun sequence YP_004261632.1 KEGG: phu:Phum_PHUM411790 major antigen, SPTR: liporotein YP_004261633.1 KEGG: pcb:PC000240.02.0 hypothetical protein; SPTR: uncharacterized protein YP_004261634.1 KEGG: rbi:RB2501_00566 hypothetical protein; SPTR: uncharacterized protein YP_004261635.1 KEGG: acd:AOLE_01270 hypothetical protein; SPTR: Ymf68 YP_004261636.1 KEGG: pfh:PFHG_02649 conserved hypothetical protein; SPTR: Histone deacetylase YP_004261637.1 COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: fbc:FB2170_15433 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2200) YP_004261638.1 COGs: COG3393 acetyltransferase; InterPro IPR000182; KEGG: cpi:Cpin_2433 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein; PFAM: FR47-like protein YP_004261639.1 COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: lby:Lbys_0800 transcription regulator; PFAM: Ferric-uptake regulator; SPTR: transcription regulator; PFAM: Ferric uptake regulator family YP_004261640.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: lby:Lbys_0799 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alkyl hydroperoxide reductase, F52a subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004261641.1 KEGG: pfh:PFHG_00613 conserved hypothetical protein; SPTR: uncharacterized protein YP_004261642.1 COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR003806; KEGG: gfo:GFO_0927 hypothetical protein; PFAM: ATP-grasp fold, DUF201-type; SPTR: uncharacterized protein; PFAM: D-ala D-ala ligase C-terminus YP_004261643.1 KEGG: fjo:Fjoh_1869 hypothetical protein; SPTR: uncharacterized protein YP_004261644.1 InterPro IPR003675; KEGG: cce:Ccel_0915 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family YP_004261645.1 COGs: COG0550 Topoisomerase IA; InterProIPR006171: IPR013497: IPR005738: IPR003601: IPR 003602; KEGG: fjo:Fjoh_2289 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase III; TIGRFAM: DNA topoisomerase III, bacterial-type; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_004261646.1 KEGG: hpl:HPB8_877 hypothetical protein; SPTR: uncharacterized protein YP_004261647.1 KEGG: cat:CA2559_00300 hypothetical protein; SPTR: uncharacterized protein YP_004261648.1 KEGG: aag:AaeL_AAEL001414 hypothetical protein; SPTR: uncharacterized protein YP_004261649.1 KEGG: rpf:Rpic12D_3987 hypothetical protein; SPTR: uncharacterized protein YP_004261650.1 KEGG: cal:CaO19.13673 class II myosin heavy chain; SPTR: uncharacterized protein MYO1 YP_004261651.1 KEGG: npu:Npun_R5142 hypothetical protein; SPTR: uncharacterized protein YP_004261652.1 KEGG: phe:Phep_1533 hypothetical protein; SPTR: uncharacterized protein YP_004261653.1 KEGG: pyo:PY02733 hypothetical protein; SPTR: uncharacterized protein YP_004261654.1 KEGG: zpr:ZPR_2941 hypothetical protein; SPTR: uncharacterized protein YP_004261655.1 InterPro IPR018958; KEGG: gym:GYMC10_3190 cell wall assembly/cell proliferation coordinating protein, KNR4-like protein; PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; SMART: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein YP_004261656.1 KEGG: tet:TTHERM_00985110 hypothetical protein; SPTR: uncharacterized protein YP_004261657.1 KEGG: eat:EAT1b_0727 hypothetical protein; SPTR: uncharacterized protein YP_004261658.1 KEGG: fjo:Fjoh_2908 hypothetical protein; SPTR: uncharacterized protein YP_004261659.1 KEGG: pdi:BDI_2163 hypothetical protein; SPTR: uncharacterized protein YP_004261660.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: pfs:PFLU4816 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family YP_004261661.1 KEGG: zpr:ZPR_1489 hypothetical protein; SPTR: uncharacterized protein YP_004261662.1 KEGG: zpr:ZPR_2942 hypothetical protein; SPTR: uncharacterized protein YP_004261663.1 KEGG: ddi:DDB_G0277419 hypothetical protein; SPTR: uncharacterized protein YP_004261664.1 InterPro IPR010432; KEGG: zpr:ZPR_0325 hypothetical protein; PFAM: RDD; SPTR: RDD family protein; PFAM: RDD family YP_004261665.1 COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: scl:sce1830 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Hypothetical conserved protein; PFAM: Calcineurin-like phosphoesterase YP_004261666.1 InterPro IPR001547: IPR000601: IPR006626; KEGG: sde:Sde_3237 cellulase; PFAM: Glycoside hydrolase, family 5; PKD domain; PRIAM: Cellulase; SPTR: endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); TIGRFAM: parallel beta-helix repeat (two copies) YP_004261667.1 InterPro IPR000182; KEGG: lby:Lbys_0909 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family protein; PFAM: Acetyltransferase (GNAT) family YP_004261668.1 COGs: COG0693 intracellular protease/amidase; InterPro IPR002818; KEGG: rbi:RB2501_10917 DJ-1/PfpI family protein; PFAM: ThiJ/PfpI; SPTR: DJ-1/PfpI family protein; PFAM: DJ-1/PfpI family YP_004261669.1 KEGG: cpi:Cpin_3028 hypothetical protein; SPTR: uncharacterized protein YP_004261670.1 KEGG: cco:CCC13826_2295 hypothetical protein; SPTR: uncharacterized protein YP_004261671.1 KEGG: shm:Shewmr7_3876 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2750) YP_004261672.1 KEGG: fba:FIC_00615 conserved hypothetical cytosolic protein; SPTR: Conserved hypothetical cytosolic protein YP_004261673.1 KEGG: mlu:Mlut_21380 hypothetical protein; SPTR: uncharacterized protein YP_004261674.1 COGs: COG4270 membrane protein; KEGG: zpr:ZPR_0737 membrane protein; SPTR: Membrane protein YP_004261675.1 KEGG: fjo:Fjoh_4554 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3592) YP_004261676.1 KEGG: ath:AT1G73480 hydrolase, alpha/beta fold family protein; SPTR: Lysophospholipase homolog YP_004261677.1 KEGG: hmg:100208708 similar to centromere protein F; SPTR: uncharacterized protein YP_004261678.1 InterPro IPR011647; KEGG: ckr:CKR_2714 hypothetical protein; PFAM: KWG Leptospira; SPTR: KWG Leptospira repeat protein YP_004261679.1 InterPro IPR013247; KEGG: lbf:LBF_2726 TPR repeat-containing protein; PFAM: SH3, type 3; SPTR: uncharacterized protein; PFAM: Bacterial SH3 domain YP_004261680.1 KEGG: lic:LIC10407 hypothetical protein; SPTR: uncharacterized protein YP_004261681.1 KEGG: pyo:PY04691 hypothetical protein; SPTR: uncharacterized protein YP_004261682.1 KEGG: cth:Cthe_1915 periplasmic sensor signal transduction histidine kinase; SPTR: Periplasmic sensor signal transduction histidine kinase YP_004261683.1 KEGG: cyj:Cyan7822_2092 group-specific protein; SPTR: Group-specific protein YP_004261684.1 InterPro IPR007837; KEGG: cpi:Cpin_4454 DinB family protein; PFAM: DinB; SPTR: uncharacterized protein; PFAM: DinB family YP_004261685.1 InterPro IPR001647; KEGG: zpr:ZPR_2198 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family YP_004261686.1 COGs: COG3558 conserved hypothetical protein; InterPro IPR009783; KEGG: cpi:Cpin_7146 protein of unknown function DUF1348; PFAM: Protein of unknown function DUF1348; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1348) YP_004261687.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: zpr:ZPR_2197 hydrolase, alpha/beta hydrolase fold family protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta hydrolase fold family protein; PFAM: alpha/beta hydrolase fold YP_004261688.1 COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: rbi:RB2501_08350 possible uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Possible uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD YP_004261689.1 KEGG: fbc:FB2170_07744 hypothetical protein; SPTR: uncharacterized protein YP_004261690.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_07754 dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase family 2 YP_004261691.1 COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680: IPR004722; KEGG: fbc:FB2170_07759 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Allantoinase; SPTR: Dihydroorotase; TIGRFAM: Dihydroorotase; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_004261692.1 KEGG: fbc:FB2170_07764 hypothetical protein; SPTR: uncharacterized protein YP_004261693.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_07769 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD dependent epimerase/dehydratase family YP_004261694.1 COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase, class Ib; InterPro IPR002307: IPR002305; KEGG: zpr:ZPR_0494 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_004261695.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659: IPR002469: IPR001375; KEGG: gfo:GFO_3446 secreted dipeptidyl-peptidase IV family protein; SPTR: Dipeptidyl-peptidase; manually curated; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_004261696.1 KEGG: dfe:Dfer_4865 hypothetical protein; SPTR: uncharacterized protein YP_004261697.1 COGs: COG0270 Site-specific DNA methylase; InterPro IPR000551: IPR001525; KEGG: wch:wcw_1690 C-5 cytosine-specific DNA methylase; PFAM: C-5 cytosine methyltransferase; HTH transcriptional regulator, MerR; PRIAM: DNA (cytosine-5-)-methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); DNA binding domain, excisionase family YP_004261698.1 InterPro IPR019057; KEGG: swp:swp_0009 type II restriction enzyme eco47ii; PFAM: Restriction endonuclease, type II, Eco47II; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II site-specific deoxyribonuclease (Sau96I-li); PFAM: Eco47II restriction endonuclease YP_004261699.1 COGs: COG2360 Leu/Phe-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; InterPro IPR004616; KEGG: fbc:FB2170_07614 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004261700.1 KEGG: fbc:FB2170_07609 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3127) YP_004261701.1 COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: fbc:FB2170_07599 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; SPTR: uncharacterized protein; PFAM: Flavin reductase like domain YP_004261702.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: fbc:FB2170_07594 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004261703.1 KEGG: fbc:FB2170_07589 hypothetical protein; SPTR: uncharacterized protein YP_004261704.1 COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: fbc:FB2170_07584 HIT family protein; PFAM: Histidine triad (HIT) protein; SPTR: HIT family protein; PFAM: HIT domain YP_004261705.1 COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR022691: IPR001437: IPR006359; KEGG: fbc:FB2170_07579 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Transcription elongation factor greA; TIGRFAM: Transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_004261706.1 KEGG: rbi:RB2501_08185 hypothetical protein; SPTR: uncharacterized protein YP_004261707.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_07564 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261708.1 KEGG: hba:Hbal_2233 glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_004261709.1 KEGG: fbc:FB2170_07559 hypothetical protein; SPTR: uncharacterized protein YP_004261710.1 COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: fbc:FB2170_07554 possible transcriptional regulatory protein NadR; SPTR: NadR-like transcriptional regulator; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type YP_004261711.1 COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: gfo:GFO_3059 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Nicotinamide mononucleotide transport (NMT) family protein; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_004261712.1 KEGG: fbc:FB2170_07544 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF77 YP_004261713.1 COGs: COG2091 Phosphopantetheinyl transferase; KEGG: fbc:FB2170_07539 siderophore (surfactin) biosynthesis regulatory protein; SPTR: Siderophore (Surfactin) biosynthesis regulatory protein; PFAM: 4'-phosphopantetheinyl transferase superfamily YP_004261714.1 COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR000043: IPR015878; KEGG: cat:CA2559_03785 S-adenosylhomocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: Adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_004261715.1 InterPro IPR013120; KEGG: fps:FP1035 hypothetical protein; PFAM: Male sterility, NAD-binding; SPTR: uncharacterized protein; PFAM: Male sterility protein YP_004261716.1 COGs: COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); InterPro IPR003431; KEGG: zpr:ZPR_4475 phytase; PFAM: Phytase; SPTR: uncharacterized protein; PFAM: Phytase YP_004261717.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR013229: IPR012910: IPR000531: IPR010104; KEGG: zpr:ZPR_4476 TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; PEGA; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor protein; TIGRFAM: Bacterial TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; PEGA domain; TIGRFAM: TonB-dependent receptor YP_004261718.1 InterPro IPR001440: IPR013249: IPR019734: IPR000792; KEGG: zpr:ZPR_4477 protein containing tetratricopeptide repeat; PFAM: RNA polymerase sigma factor 70, region 4 type 2; Tetratricopeptide TPR-1; SMART: Transcription regulator LuxR, C-terminal; Tetratricopeptide repeat; SPTR: Protein containing tetratricopeptide repeat YP_004261719.1 COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: fbc:FB2170_07524 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_004261720.1 COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787: IPR003583; KEGG: fps:FP2217 50S ribosomal protein L21; PFAM: Ribosomal protein L21; SMART: Helix-hairpin-helix DNA-binding motif, class 1; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_004261721.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: fjo:Fjoh_1544 peptidase M16 domain-containing protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Probable peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_004261722.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: fbc:FB2170_07509 metallopeptidase, M16 family protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; PRIAM: processing peptidase; SPTR: metallopeptidase, M16 family protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_004261723.1 InterPro IPR006121; KEGG: fjo:Fjoh_1541 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: uncharacterized protein; PFAM: Heavy-metal-associated domain YP_004261724.1 InterPro IPR019850; KEGG: rbi:RB2501_08085 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldD; TIGRFAM: gliding motility-associated lipoprotein GldD YP_004261725.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170: IPR019862; KEGG: fbc:FB2170_07479 transmembrane CorC/HlyC family transporter associated protein; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; SPTR: transmembrane CorC/HlyC family transporter associated protein; TIGRFAM: Gliding motility-associated protein GldE; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE YP_004261726.1 COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: fbc:FB2170_07474 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004261727.1 COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265: IPR003651: IPR005760; KEGG: fbc:FB2170_07469 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_004261728.1 COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_07464 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HU; PFAM: Bacterial DNA-binding protein YP_004261729.1 COGs: COG1530 Ribonuclease G and E; InterPro IPR019307: IPR004659; KEGG: fbc:FB2170_07459 ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Ribonuclease G; TIGRFAM: Ribonuclease E/G; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_004261730.1 COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: fbc:FB2170_07449 transcriptional regulatory protein; PFAM: Regulatory protein RecX; SPTR: Regulatory protein RecX; PFAM: RecX family YP_004261731.1 InterPro IPR003347; KEGG: rbi:RB2501_08045 hypothetical protein; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; SPTR: uncharacterized protein; PFAM: Cupin superfamily protein YP_004261732.1 COGs: COG0502 Biotin synthase; InterPro IPR007197: IPR010722: IPR002684: IPR006638; KEGG: cat:CA2559_02695 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; PRIAM: Biotin synthase; SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: Biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase YP_004261733.1 COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: amt:Amet_2170 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: uncharacterized protein; PFAM: SPFH domain / Band 7 family YP_004261734.1 KEGG: amt:Amet_2169 hypothetical protein; SPTR: uncharacterized protein YP_004261735.1 COGs: COG0304 3-oxoacyl-ACP synthase; InterPro IPR014030: IPR014031: IPR020841; KEGG: fps:FP2327 3-oxoacyl-ACP synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_004261736.1 COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814: IPR005815; KEGG: gfo:GFO_3563 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase; SPTR: Adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_004261737.1 COGs: COG0132 Dethiobiotin synthetase; HAMAP: Dethiobiotin synthase; InterPro IPR004472; KEGG: hmg:100211816 similar to DEHA2G24772p; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; TIGRFAM: dethiobiotin synthase YP_004261738.1 KEGG: fbc:FB2170_07424 hypothetical protein; SPTR: uncharacterized protein YP_004261739.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fjo:Fjoh_0814 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II YP_004261740.1 InterPro IPR002110; KEGG: tva:TVAG_258920 ankyrin repeat protein; SPTR: ankyrin-related protein YP_004261741.1 COGs: COG3579 Aminopeptidase C; InterPro IPR000668; KEGG: cat:CA2559_10538 hypothetical protein; PFAM: Peptidase C1A, papain C-terminal; SPTR: uncharacterized protein; PFAM: Peptidase C1-like family YP_004261742.1 COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126; KEGG: fps:FP0389 UmuC protein; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: Nucleotidyltransferase/DNA polymerase involved in DNA repair; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_004261743.1 COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR019759; KEGG: fjo:Fjoh_1967 prophage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: UmuD/RumA DNA repair protein; PFAM: Peptidase S24-like YP_004261744.1 COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: fbc:FB2170_07409 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; SPTR: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain YP_004261745.1 COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR003593: IPR004100: IPR005722: IPR000793: IPR 000194; KEGG: fbc:FB2170_07404 ATP synthase subunit B; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase subunit beta; TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_004261746.1 InterPro IPR001087; KEGG: rbi:RB2501_03300 hypothetical protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase YP_004261747.1 InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_07399 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261748.1 COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; InterPro IPR005855: IPR000583: IPR001347; KEGG: fbc:FB2170_07394 glucosamine--fructose-6-phosphate aminotransferase; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_004261749.1 KEGG: fbc:FB2170_07389 hypothetical protein; SPTR: uncharacterized protein YP_004261750.1 COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: fbc:FB2170_07384 glycogen synthase-related protein; PFAM: Starch synthase, catalytic domain; PRIAM: Starch synthase; SPTR: Glycogen synthase-related protein; PFAM: Starch synthase catalytic domain YP_004261751.1 COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721: IPR004821; KEGG: fbc:FB2170_07379 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_004261752.1 COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: fbc:FB2170_07374 aspartate 1-decarboxylase precursor; PFAM: Aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_004261753.1 InterPro IPR022791: IPR005242; KEGG: rbi:RB2501_07960 dolichol-P-glucose synthetase; PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; SPTR: dolichol-P-glucose synthetase; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_004261754.1 KEGG: fbc:FB2170_07364 predicted hydrolase of the alpha/beta superfamily protein; SPTR: Predicted hydrolase of the alpha/beta superfamily protein; PFAM: esterase YP_004261755.1 COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504: IPR003593; KEGG: fbc:FB2170_07359 DNA repair protein; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_004261756.1 COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fbc:FB2170_07349 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family YP_004261757.1 InterPro IPR003088; KEGG: rbi:RB2501_07740 SCO1/SenC family protein/cytochrome c; PFAM: Cytochrome c, class I; SPTR: SCO1/SenC family protein/cytochrome c; PFAM: Cytochrome c YP_004261758.1 COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: fbc:FB2170_06950 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: uncharacterized protein; PFAM: alpha/beta hydrolase fold YP_004261759.1 COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_06960 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase YP_004261760.1 COGs: COG0824 thioesterase; KEGG: fbc:FB2170_06965 hypothetical protein; SPTR: uncharacterized protein; PFAM: Acyl-ACP thioesterase YP_004261761.1 InterPro IPR000620; KEGG: fbc:FB2170_06975 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; PFAM: EamA-like transporter family YP_004261762.1 COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: fbc:FB2170_06980 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: uncharacterized protein; PFAM: ArsC family YP_004261763.1 KEGG: fbc:FB2170_07015 hypothetical protein; SPTR: uncharacterized protein YP_004261764.1 KEGG: fbc:FB2170_07020 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3298) YP_004261765.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_07025 Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004261766.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097: IPR006096; KEGG: fbc:FB2170_07085 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase (NADP(+)); PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_004261767.1 COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: fbc:FB2170_07090 DNA repair protein; PFAM: Recombination protein O, RecO; SPTR: DNA repair protein recO; TIGRFAM: Recombination protein O, RecO; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_004261768.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_07095 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261769.1 KEGG: str:Sterm_0602 hypothetical protein; SPTR: uncharacterized protein YP_004261770.1 COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase, class Ia; InterPro IPR002301: IPR002300: IPR013155; KEGG: fbc:FB2170_07105 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase YP_004261771.1 KEGG: rbi:RB2501_07805 regulatory protein; SPTR: regulatory protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_004261772.1 KEGG: fbc:FB2170_07115 hypothetical protein; SPTR: uncharacterized protein YP_004261773.1 COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: fbc:FB2170_07120 signal peptidase; SPTR: Lipoprotein signal peptidase 1; PFAM: Signal peptidase (SPase) II YP_004261774.1 COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: fbc:FB2170_07125 5-formyltetrahydrofolate cyclo-ligase, PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase, ; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_004261775.1 COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: Excinuclease ABC, C subunit; InterPro IPR004791: IPR000305: IPR001162; KEGG: fbc:FB2170_07130 excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; PFAM: UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_004261776.1 COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641: IPR010827; KEGG: fbc:FB2170_07135 patatin-like phospholipase; PFAM: Patatin/Phospholipase A2-related; Surface antigen variable number; SPTR: patatin-like phospholipase; PFAM: Patatin-like phospholipase YP_004261777.1 COGs: COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; InterPro IPR004360: IPR005956; KEGG: fbc:FB2170_07140 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: 4-hydroxyphenylpyruvate dioxygenase; SPTR: 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase YP_004261778.1 KEGG: fbc:FB2170_07145 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3108) YP_004261779.1 COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: rbi:RB2501_07855 tryptophan 2,3-dioxygenase; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase; PFAM: Tryptophan 2,3-dioxygenase YP_004261780.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_07150 peptidase, M23/M37 family protein; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family protein; PFAM: Peptidase family M23 YP_004261781.1 COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: fbc:FB2170_07155 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase YP_004261782.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_0195 TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261783.1 KEGG: zpr:ZPR_0196 hypothetical protein; SPTR: uncharacterized protein YP_004261784.1 COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: zpr:ZPR_0197 VcbS; PFAM: Endonuclease I; SPTR: VCBS; PFAM: Endonuclease I YP_004261785.1 KEGG: fbc:FB2170_07165 hypothetical protein; SPTR: uncharacterized protein YP_004261786.1 InterPro IPR005135; KEGG: fbc:FB2170_07175 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family YP_004261787.1 KEGG: fjo:Fjoh_1168 TonB-dependent receptor; SPTR: TonB dependent/ligand-gated channel YP_004261788.1 KEGG: rbi:RB2501_07895 extracellular nuclease; SPTR: Extracellular nuclease YP_004261789.1 InterPro IPR001789; KEGG: rbi:RB2501_07200 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: Response regulator receiver domain YP_004261790.1 COGs: COG0642 Signal transduction histidine kinase; InterProIPR013767: IPR013655: IPR003594: IPR000014: IPR 001610; KEGG: zpr:ZPR_1892 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_004261791.1 KEGG: fbc:FB2170_07210 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF664) YP_004261792.1 COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_07225 amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: amidohydrolase; PFAM: Carbon-nitrogen hydrolase YP_004261793.1 KEGG: fbc:FB2170_07230 hypothetical protein; SPTR: uncharacterized protein YP_004261794.1 COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_07235 amidophosphoribosyl-transferase; PFAM: Phosphoribosyltransferase; SPTR: amidophosphoribosyl-transferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_004261795.1 KEGG: fbc:FB2170_07240 hypothetical protein; SPTR: uncharacterized protein YP_004261796.1 COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314: IPR004154: IPR002315; KEGG: fbc:FB2170_07245 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type YP_004261797.1 KEGG: fbc:FB2170_07329 hypothetical protein; SPTR: uncharacterized protein YP_004261798.1 COGs: COG0708 Exonuclease III; InterPro IPR005135: IPR000097: IPR004808; KEGG: fbc:FB2170_07334 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_004261799.1 COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: cpi:Cpin_0489 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_004261800.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547: IPR002645; KEGG: zpr:ZPR_0777 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; PFAM: Sulfate transporter family; STAS domain YP_004261801.1 COGs: COG0579 dehydrogenase; HAMAP: Malate:quinone-oxidoreductase; InterPro IPR006231; KEGG: dfe:Dfer_4539 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; PRIAM: Malate dehydrogenase (acceptor); SPTR: Probable malate:quinone oxidoreductase; TIGRFAM: Malate:quinone-oxidoreductase; PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase YP_004261802.1 KEGG: fbc:FB2170_06895 hypothetical protein; SPTR: uncharacterized protein YP_004261803.1 COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR011128: IPR006109; KEGG: fbc:FB2170_06890 phospholipids biosynthesis; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_004261804.1 KEGG: bcz:pE33L466_0001 hypothetical protein; SPTR: uncharacterized protein YP_004261805.1 KEGG: mru:mru_1833 phosphatidylserine decarboxylase PSD; SPTR: Phosphatidylserine decarboxylase Psd YP_004261806.1 KEGG: cow:Calow_0789 major facilitator superfamily mfs_1; SPTR: uncharacterized protein YP_004261807.1 COGs: COG3779 conserved hypothetical protein; InterPro IPR018756; KEGG: gem:GM21_2418 hypothetical protein; PFAM: Protein of unknown function DUF2314; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2314) YP_004261808.1 KEGG: lil:LA_1000 hypothetical protein; SPTR: uncharacterized protein YP_004261809.1 KEGG: phe:Phep_2278 hypothetical protein; SPTR: uncharacterized protein YP_004261810.1 KEGG: chu:CHU_2150 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3037) YP_004261811.1 KEGG: coc:Coch_1735 hypothetical protein; SPTR: uncharacterized protein YP_004261812.1 KEGG: brm:Bmur_1156 hypothetical protein; SPTR: uncharacterized protein YP_004261813.1 KEGG: cbk:CLL_A3297 hypothetical protein; SPTR: uncharacterized protein YP_004261814.1 KEGG: scm:SCHCODRAFT_37945 hypothetical protein; SPTR: uncharacterized protein YP_004261815.1 COGs: COG3751 proline hydroxylase; InterPro IPR005123: IPR006620; KEGG: svo:SVI_4108 SM-20 domain protein; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: SM-20 domain protein YP_004261816.1 COGs: COG4922 conserved hypothetical protein; InterPro IPR009959; KEGG: cat:CA2559_10133 hypothetical protein; PFAM: Protein of unknown function DUF1486; SPTR: uncharacterized protein; PFAM: SnoaL-like polyketide cyclase YP_004261817.1 KEGG: zpr:ZPR_0977 hypothetical protein; SPTR: uncharacterized protein YP_004261818.1 COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterPro IPR001264: IPR001460: IPR009647: IPR011815; KEGG: fbc:FB2170_06870 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal; PRIAM: Peptidoglycan glycosyltransferase; SPTR: penicillin-binding protein; TIGRFAM: Penicillin-binding protein 1C; PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C YP_004261819.1 KEGG: fbc:FB2170_06860 hypothetical protein; SPTR: uncharacterized protein YP_004261820.1 InterPro IPR003825; KEGG: fbc:FB2170_06855 hypothetical protein; PFAM: Colicin V production, CvpA; SPTR: uncharacterized protein; PFAM: Colicin V production protein YP_004261821.1 KEGG: paa:Paes_0901 peptide chain release factor 3; SPTR: Peptide chain release factor 3 YP_004261823.1 COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890: IPR011625; KEGG: fbc:FB2170_06835 outer membrane protein; PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; SPTR: outer membrane protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin MG1 domain; Alpha-2-macroglobulin family N-terminal region YP_004261824.1 COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: fbc:FB2170_06830 allergen V5/TPX-1 related protein; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1 related protein; PFAM: Cysteine-rich secretory protein family YP_004261825.1 COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: fbc:FB2170_06830 allergen V5/TPX-1 related protein; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1 related protein; PFAM: Cysteine-rich secretory protein family YP_004261826.1 InterPro IPR010329; KEGG: fbc:FB2170_06825 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; PRIAM: 3-hydroxyanthranilate 3,4-dioxygenase; SPTR: 3-hydroxyanthranilate 3,4-dioxygenase; TIGRFAM: 3-hydroxyanthranilic acid dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase YP_004261827.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: zpr:ZPR_0298 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: L-aminoadipate-semialdehyde dehydrogenase; SPTR: Piperideine-6-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004261828.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_06800 OmpA domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA domain protein; PFAM: OmpA family YP_004261829.1 KEGG: fbc:FB2170_06795 hypothetical protein; SPTR: uncharacterized protein YP_004261830.1 InterPro IPR005067; KEGG: fbc:FB2170_06790 acyl-[acyl-carrier protein] desaturase; PFAM: Fatty acid desaturase, type 2; PRIAM: Acyl-ACP desaturase; SPTR: acyl-[acyl-carrier protein] desaturase; PFAM: Fatty acid desaturase YP_004261831.1 InterPro IPR004843; KEGG: fbc:FB2170_06785 serine/threonine protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: Serine/threonine protein phosphatase; PFAM: Calcineurin-like phosphoesterase YP_004261832.1 KEGG: fbc:FB2170_06780 hypothetical protein; SPTR: uncharacterized protein YP_004261833.1 COGs: COG4260 virion core protein (lumpy skin disease virus); KEGG: fbc:FB2170_06775 hypothetical protein; SPTR: uncharacterized protein; PFAM: SPFH domain / Band 7 family YP_004261834.1 KEGG: fbc:FB2170_06735 hypothetical protein; SPTR: uncharacterized protein; PFAM: Divergent AAA domain YP_004261835.1 COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: fbc:FB2170_06730 oxidoreductase, short chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Serine 3-dehydrogenase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase YP_004261836.1 COGs: COG4989 oxidoreductase; InterPro IPR023210; KEGG: fbc:FB2170_06725 hypothetical protein; PFAM: NADP-dependent oxidoreductase domain; SPTR: Oxidoreductase, aldo/keto reductase; PFAM: Aldo/keto reductase family YP_004261837.1 KEGG: cac:CA_C1702 hypothetical protein; SPTR: uncharacterized protein YP_004261838.1 COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_06720 magnesium chelatase; PFAM: ATPase, AAA-3; SPTR: magnesium chelatase; PFAM: ATPase family associated with various cellular activities (AAA) YP_004261839.1 COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881: IPR002035; KEGG: fbc:FB2170_06715 hypothetical protein; PFAM: Domain of unknown function DUF58; von Willebrand factor, type A; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF58 YP_004261840.1 KEGG: fbc:FB2170_06710 hypothetical protein; SPTR: uncharacterized protein YP_004261841.1 InterPro IPR002035; KEGG: fbc:FB2170_06705 BatA protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatA protein; PFAM: von Willebrand factor type A domain YP_004261842.1 InterPro IPR002035; KEGG: fbc:FB2170_06700 aerotolerance-related membrane protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Aerotolerance-related membrane protein; PFAM: von Willebrand factor type A domain YP_004261843.1 InterPro IPR001440: IPR019734; KEGG: fbc:FB2170_06695 aerotolerance-related exported protein; PFAM: Tetratricopeptide TPR-1; SPTR: Aerotolerance-related exported protein; PFAM: Tetratricopeptide repeat YP_004261844.1 KEGG: fbc:FB2170_06690 aerotolerance-related exported protein; SPTR: Aerotolerance-related exported protein YP_004261845.1 InterPro IPR001440: IPR013247: IPR019734: IPR003646; KEGG: fbc:FB2170_06685 BatE, TRP domain containing protein; PFAM: Tetratricopeptide TPR-1; SH3, type 3; SMART: SH3-like domain, bacterial; Tetratricopeptide repeat; SPTR: BatE, TRP domain containing protein; PFAM: Tetratricopeptide repeat; Bacterial SH3 domain YP_004261846.1 KEGG: fbc:FB2170_06680 hypothetical protein; SPTR: uncharacterized protein YP_004261848.1 COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: rbi:RB2501_07585 prokaryotic-type carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; SPTR: Prokaryotic-type carbonic anhydrase; PFAM: Carbonic anhydrase YP_004261849.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547: IPR002645; KEGG: fbc:FB2170_06670 sulfate transporter/antisigma-factor antagonist STAS; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter/antisigma-factor antagonist STAS; PFAM: Sulfate transporter family; STAS domain YP_004261850.1 COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; InterPro IPR022911: IPR004188: IPR002319: IPR004529; KEGG: fbc:FB2170_06665 phenylalanyl-tRNA synthetase alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_004261851.1 KEGG: fbc:FB2170_06660 hypothetical protein; SPTR: uncharacterized protein YP_004261852.1 COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR008503: IPR013651: IPR004666; KEGG: rbi:RB2501_05245 possible ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; Protein of unknown function DUF785; SPTR: Alpha-L-glutamate ligase, RimK family; TIGRFAM: S6 modification enzyme RimK; PFAM: RimK-like ATP-grasp domain; Protein of unknown function (DUF785); TIGRFAM: alpha-L-glutamate ligases, RimK family YP_004261853.1 COGs: COG2954 conserved hypothetical protein; InterPro IPR008172; KEGG: fbc:FB2170_06650 hypothetical protein; PFAM: Adenylate cyclase; SPTR: Adenylate cyclase; PFAM: CYTH domain YP_004261854.1 InterPro IPR000534; KEGG: fbc:FB2170_06610 nucleoside-diphosphate-sugar epimerase; PFAM: Semialdehyde dehydrogenase, NAD-binding; SPTR: Nucleoside-diphosphate-sugar epimerase; PFAM: Semialdehyde dehydrogenase, NAD binding domain YP_004261855.1 COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR022880: IPR001126; KEGG: fbc:FB2170_06605 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV 2; PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family YP_004261856.1 COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479; KEGG: fbc:FB2170_01075 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxidase; SPTR: Peroxidase; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family YP_004261857.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: rbi:RB2501_10837 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004261858.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR002078: IPR002197: IPR003593; KEGG: rbi:RB2501_10832 two component, sigma54 specific, transcriptional regulator, fis family protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Transcriptional regulator, helix-turn-helix, sigma-54 interaction domain; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_004261859.1 KEGG: hmg:100205372 similar to Protein FAM46C; SPTR: uncharacterized protein YP_004261860.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097: IPR006096; KEGG: rbi:RB2501_10817 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NAD(P)(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: NAD dependent Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_004261861.1 COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: rbi:RB2501_10812 nucleoside diphosphate kinase regulator; PFAM: Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Nucleoside diphosphate kinase regulator; PFAM: Transcription elongation factor, GreA/GreB, C-term YP_004261862.1 KEGG: rbi:RB2501_10807 hypothetical protein; SPTR: uncharacterized protein YP_004261863.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_07874 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter YP_004261864.1 InterPro IPR003838; KEGG: zpr:ZPR_4634 FtsX-related transmembrane transport protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: FtsX-related transmembrane transport protein; PFAM: Predicted permease YP_004261865.1 InterPro IPR003838; KEGG: gfo:GFO_0710 FtsX family membrane protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: FtsX family membrane protein (Predicted permease); PFAM: Predicted permease YP_004261866.1 InterPro IPR003838; KEGG: dfe:Dfer_4840 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter permease; PFAM: Predicted permease YP_004261867.1 KEGG: fbc:FB2170_07869 lipoprotein; SPTR: lipoprotein; PFAM: Protein of unknown function (DUF2807) YP_004261868.1 InterPro IPR003838; KEGG: fbc:FB2170_07854 ABC transporter, permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter, permease; PFAM: Predicted permease YP_004261869.1 InterPro IPR003838; KEGG: sli:Slin_0947 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: transporter permease; PFAM: Predicted permease YP_004261870.1 InterPro IPR003838; KEGG: fbc:FB2170_07849 ABC transporter, permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter, permease; PFAM: Predicted permease YP_004261871.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_07844 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; TIGRFAM: bacteriocin export ABC transporter, lactococcin 972 group YP_004261872.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_07839 efflux transporter, MFP component, RND family protein; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, MFP component, RND family protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_004261873.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_07834 outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein YP_004261874.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR002078: IPR002197: IPR003593; KEGG: fbc:FB2170_07829 two-component system response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_004261875.1 COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594; KEGG: fbc:FB2170_07824 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: two-component system sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_004261876.1 COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: fbc:FB2170_06310 class I peptide chain release factor; PFAM: Peptide chain release factor class I/class II; SPTR: Class I peptide chain release factor; PFAM: RF-1 domain YP_004261877.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_06315 iron(III) ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Iron(III) ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004261878.1 COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR004106: IPR001375; KEGG: fbc:FB2170_06320 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Prolyl oligopeptidase; SPTR: Prolyl endopeptidase; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_004261879.1 COGs: COG1280 threonine efflux protein; InterPro IPR001123; KEGG: phe:Phep_4224 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Transporter, LysE family protein; PFAM: LysE type translocator YP_004261880.1 COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534: IPR012280: IPR005986; KEGG: fbc:FB2170_06325 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_004261881.1 COGs: COG1970 Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: rbi:RB2501_07395 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_004261882.1 COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821: IPR001608: IPR011079; KEGG: fbc:FB2170_06335 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: Alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_004261883.1 COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: fbc:FB2170_06340 thymidine kinase; PFAM: Thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase YP_004261884.1 KEGG: fbc:FB2170_06350 hypothetical protein; SPTR: uncharacterized protein YP_004261885.1 KEGG: fbc:FB2170_06355 hypothetical protein; SPTR: uncharacterized protein YP_004261886.1 COGs: COG0313 methyltransferase; InterPro IPR000878: IPR008189; KEGG: gfo:GFO_3356 tetrapyrrole (corrin/porphyrin) methylase; PFAM: Tetrapyrrole methylase; SPTR: Tetrapyrrole (Corrin/porphyrin) methylase; TIGRFAM: Uncharacterised protein family UPF0011; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_004261887.1 InterPro IPR007484; KEGG: gau:GAU_3847 hypothetical protein; PFAM: Peptidase M28; SPTR: uncharacterized protein; PFAM: Peptidase family M28 YP_004261888.1 InterPro IPR014984; KEGG: cja:CJA_1687 type III effector HopPmaJ(Pto); PFAM: HopJ type III effector protein; SPTR: uncharacterized protein; PFAM: HopJ type III effector protein YP_004261889.1 KEGG: pfd:PFDG_01532 hypothetical protein; SPTR: Chromosome undetermined scaffold_57, whole genome shotgun sequence YP_004261890.1 InterPro IPR003779; KEGG: cat:CA2559_02815 probable fusion protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_004261891.1 COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: fbc:FB2170_06380 hypothetical protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: uncharacterized protein; PFAM: OsmC-like protein YP_004261892.1 KEGG: fps:FP1914 hypothetical protein; SPTR: uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436 YP_004261893.1 COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667: IPR003156: IPR004610; KEGG: fbc:FB2170_06385 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease recJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_004261894.1 KEGG: zpr:ZPR_0403 hypothetical protein; SPTR: uncharacterized protein YP_004261895.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_0402 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependant outer membrane receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261896.1 KEGG: rbi:RB2501_09440 hypothetical protein; SPTR: secreted protein YP_004261897.1 InterPro IPR007329; KEGG: fbc:FB2170_00970 FMN-binding protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: FMN-binding protein; PFAM: FMN-binding domain YP_004261898.1 KEGG: fjo:Fjoh_0593 hypothetical protein; SPTR: uncharacterized protein YP_004261899.1 InterPro IPR011701; KEGG: rbi:RB2501_13114 transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: transporter; PFAM: Bacterial protein of unknown function (DUF894) YP_004261900.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_01871 OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Peptidoglycan-associated lipoprotein; PFAM: OmpA family YP_004261901.1 COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fbc:FB2170_06395 UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallo-dependent phosphatase; SPTR: UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase YP_004261902.1 COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: fbc:FB2170_06420 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_004261903.1 COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: rbi:RB2501_07585 prokaryotic-type carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; SPTR: Prokaryotic-type carbonic anhydrase; PFAM: Carbonic anhydrase YP_004261904.1 KEGG: xbo:XBJ1_2253 universal stress protein UP12, flavoprotein, ETFP adenine nucleotide-binding domain; SPTR: uncharacterized protein; PFAM: Universal stress protein family YP_004261905.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: rbi:RB2501_07590 sulfate transporter; PFAM: Sulphate transporter; SPTR: Sulfate permease; PFAM: Sulfate transporter family YP_004261906.1 KEGG: gfo:GFO_3418 hypothetical protein; SPTR: uncharacterized protein YP_004261908.1 KEGG: gfo:GFO_0525 hypothetical protein; SPTR: uncharacterized protein YP_004261909.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_06445 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family YP_004261910.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_06450 hypothetical protein; PFAM: Multi antimicrobial extrusion protein; SPTR: uncharacterized protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family YP_004261911.1 InterPro IPR000182; KEGG: fbc:FB2170_06455 predicted acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004261912.1 InterPro IPR006016; KEGG: fbc:FB2170_06460 hypothetical protein; PFAM: UspA; SPTR: uncharacterized protein; PFAM: Universal stress protein family YP_004261913.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: sli:Slin_5397 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_004261914.1 InterPro IPR012944; KEGG: phe:Phep_0726 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004261915.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662: IPR012910: IPR000531; KEGG: phe:Phep_0725 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SMART: Secretin/TonB, short N-terminal; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain YP_004261916.1 COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2007 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; PFAM: FecR protein YP_004261917.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284: IPR014327; KEGG: zpr:ZPR_1753 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_004261918.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: phe:Phep_3986 helix-turn-helix-domain containing protein AraC type; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004261919.1 InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_0351 TonB-dependent receptor Plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent Receptor Plug domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004261920.1 InterPro IPR012944; KEGG: zpr:ZPR_0352 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; PFAM: SusD family YP_004261921.1 KEGG: zpr:ZPR_0353 hypothetical protein; SPTR: uncharacterized protein YP_004261922.1 KEGG: csc:Csac_2519 coagulation factor 5/8 type domain-containing protein; SPTR: lipoprotein YP_004261923.1 COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: csc:Csac_2527 glycosidase, PH1107-related; PFAM: Glycosidase, PH1107-related; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF377) YP_004261924.1 KEGG: csc:Csac_2519 coagulation factor 5/8 type domain-containing protein; SPTR: uncharacterized protein YP_004261925.1 COGs: COG4146 symporter; InterPro IPR001734: IPR019900; KEGG: rmr:Rmar_2388 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_004261926.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001173; KEGG: fbc:FB2170_03460 glycosyl transferase; PFAM: Signal transduction response regulator, receiver domain; Glycosyl transferase, family 2; SMART: Signal transduction response regulator, receiver domain; SPTR: glycosyl transferase; PFAM: Response regulator receiver domain; Glycosyl transferase family 2 YP_004261927.1 KEGG: fbc:FB2170_03465 hypothetical protein; SPTR: uncharacterized protein YP_004261928.1 KEGG: fbc:FB2170_03470 hypothetical protein; SPTR: uncharacterized protein YP_004261929.1 InterPro IPR001547; KEGG: fbc:FB2170_03475 hypothetical protein; PFAM: Glycoside hydrolase, family 5; SPTR: uncharacterized protein; PFAM: Cellulase (glycosyl hydrolase family 5) YP_004261930.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_03480 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1 YP_004261931.1 KEGG: fbc:FB2170_03490 capsular polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide biosynthesis protein YP_004261932.1 KEGG: tva:TVAG_551850 Formin Homology 2 Domain containing protein; SPTR: uncharacterized protein YP_004261933.1 InterPro IPR013105; KEGG: fbc:FB2170_03495 TPR domain protein; PFAM: Tetratricopeptide TPR2; SPTR: TPR domain protein; PFAM: Tetratricopeptide repeat YP_004261934.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_03505 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004261935.1 KEGG: fbc:FB2170_03510 hypothetical protein; SPTR: uncharacterized protein YP_004261936.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003594; KEGG: zpr:ZPR_3575 histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase/response regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004261937.1 COGs: COG3287 conserved hypothetical protein; InterPro IPR013702: IPR019494; KEGG: fps:FP1018 hypothetical protein; PFAM: FIST C domain; FIST domain, N-terminal; SMART: FIST domain, N-terminal; SPTR: uncharacterized protein; PFAM: FIST C domain; FIST N domain YP_004261938.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767: IPR003661: IPR003594: IPR000014: IPR 001610; KEGG: zpr:ZPR_3573 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; PAC motif; PAS; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_004261939.1 InterPro IPR011644; KEGG: fbc:FB2170_03520 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: Haem NO binding; SPTR: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: Heme NO binding YP_004261940.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: fbc:FB2170_03525 response regulator receiver domain protein (CheY-like); PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Response regulator receiver domain YP_004261941.1 COGs: COG3893 Inactivated superfamily I helicase; KEGG: fbc:FB2170_06515 hypothetical protein; SPTR: uncharacterized protein YP_004261942.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367: IPR006665; KEGG: fbc:FB2170_06520 thrombospondin type 3 repeat:OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Thrombospondin type 3 repeat:OmpA/MotB; PFAM: OmpA family; Thrombospondin type 3 repeat YP_004261943.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR011282; KEGG: fbc:FB2170_06525 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_004261944.1 COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: fbc:FB2170_06530 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent helicase; PFAM: UvrD/REP helicase; Uncharacterized conserved protein (DUF2075) YP_004261945.1 COGs: COG0605 Superoxide dismutase; InterPro IPR019831: IPR019832; KEGG: fbc:FB2170_06535 superoxide dismutase, Mn family protein; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_004261946.1 KEGG: fps:FP0506 metalloprotease; SPTR: Metalloprotease YP_004261947.1 COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: fbc:FB2170_06540 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; PFAM: Glutamine amidotransferases class-II YP_004261948.1 COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fbc:FB2170_06545 carbohydrate kinase, PfkB family protein; PFAM: Carbohydrate/purine kinase; SPTR: Carbohydrate kinase, PfkB family protein; PFAM: pfkB family carbohydrate kinase YP_004261949.1 COGs: COG3341 double-stranded RNA/RNA-DNA hybrid binding protein; KEGG: cat:CA2559_03160 ribonuclease H-related protein; SPTR: Ribonuclease H-related protein; PFAM: RNase H; Caulimovirus viroplasmin YP_004261950.1 COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376; KEGG: fbc:FB2170_06555 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; PRIAM: Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_004261951.1 COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR006163: IPR003231; KEGG: fbc:FB2170_06560 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_004261952.1 COGs: COG0304 3-oxoacyl-ACP synthase; InterPro IPR014030: IPR014031: IPR017568: IPR020841; KEGG: fbc:FB2170_06565 3-oxoacyl-ACP synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: 3-oxoacyl-ACP synthase II; TIGRFAM: 3-oxoacyl-ACP synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_004261953.1 COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999: IPR001159: IPR011907; KEGG: fbc:FB2170_06570 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA-binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_004261954.1 KEGG: fbc:FB2170_06575 hypothetical protein; SPTR: uncharacterized protein YP_004261955.1 COGs: COG0469 Pyruvate kinase; InterPro IPR015793: IPR015795: IPR001697; KEGG: fbc:FB2170_06580 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_004261956.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: fbc:FB2170_06585 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004261957.1 COGs: COG2128 conserved hypothetical protein; InterPro IPR003779: IPR004675; KEGG: fbc:FB2170_06590 alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase AhpD core; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_004261958.1 KEGG: fbc:FB2170_06595 hypothetical protein; SPTR: uncharacterized protein; PFAM: Copper binding proteins, plastocyanin/azurin family YP_004261959.1 KEGG: fbc:FB2170_06295 hypothetical protein; SPTR: uncharacterized protein YP_004261960.1 COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_06285 oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004261961.1 KEGG: pfd:PFDG_03038 hypothetical protein; SPTR: uncharacterized protein YP_004261962.1 KEGG: cpi:Cpin_4555 hypothetical protein; SPTR: uncharacterized protein YP_004261963.1 KEGG: cpi:Cpin_4554 hypothetical protein; SPTR: uncharacterized protein YP_004261964.1 COGs: COG3779 conserved hypothetical protein; InterPro IPR018756: IPR002110; KEGG: fjo:Fjoh_4681 hypothetical protein; PFAM: Protein of unknown function DUF2314; Ankyrin repeat; SPTR: Uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2314) YP_004261965.1 COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481: IPR005479: IPR005482: IPR004549; KEGG: fbc:FB2170_06280 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_004261966.1 COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089: IPR001249; KEGG: fbc:FB2170_06275 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004261967.1 COGs: COG0332 3-oxoacyl-ACP; HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR013751: IPR013747: IPR004655; KEGG: cat:CA2559_02345 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-ACP synthase 3 1; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-ACP synthase III YP_004261968.1 HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: fbc:FB2170_06265 50S ribosomal protein L32 (ribosomal protein I); PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_004261969.1 InterPro IPR003772; KEGG: rbi:RB2501_07350 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: uncharacterized protein; PFAM: Uncharacterized ACR, COG1399 YP_004261970.1 COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: cat:CA2559_02330 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_004261971.1 COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: fjo:Fjoh_0650 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_004261972.1 COGs: COG4299 conserved hypothetical protein; KEGG: fbc:FB2170_06240 hypothetical protein; PRIAM: Heparan-alpha-glucosaminide N-acetyltransferase; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1624) YP_004261973.1 COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_06235 sodium/glucose cotransporter; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; PFAM: Sodium:solute symporter family YP_004261974.1 InterPro IPR002781; KEGG: rbi:RB2501_07325 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: uncharacterized protein; PFAM: Sulfite exporter TauE/SafE YP_004261975.1 InterPro IPR011123; KEGG: rbi:RB2501_07285 hypothetical protein; PFAM: Two component regulator three Y; SPTR: uncharacterized protein; PFAM: Y_Y_Y domain YP_004261976.1 InterPro IPR012910: IPR000531; KEGG: rbi:RB2501_07290 TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane protein; manually curated; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004261977.1 InterPro IPR012944; KEGG: rbi:RB2501_07295 hypothetical protein; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; PFAM: SusD family YP_004261978.1 KEGG: rbi:RB2501_07300 hypothetical protein; SPTR: uncharacterized protein YP_004261979.1 COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07305 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329) YP_004261980.1 COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07310 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329) YP_004261981.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR002772; KEGG: zpr:ZPR_3503 glycoside hydrolase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; PRIAM: Beta-glucosidase; SPTR: Beta-glucosidase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_004261982.1 KEGG: gfo:GFO_0370 secreted lipase/esterase; SPTR: Esterase; PFAM: Phospholipase/Carboxylesterase YP_004261983.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_3504 sulfatase; PFAM: Sulfatase; SPTR: N-acetylglucosamine-6-sulfatase; PFAM: Sulfatase YP_004261984.1 COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: bfs:BF1918 transmembrane symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: transmembrane symporter; PFAM: Sodium:dicarboxylate symporter family YP_004261985.1 KEGG: bfs:BF0974 hypothetical protein; SPTR: uncharacterized protein YP_004261986.1 KEGG: yen:YE1103 hypothetical protein; SPTR: uncharacterized protein yegP; PFAM: Domain of unknown function (DUF1508) YP_004261987.1 COGs: COG1690 conserved hypothetical protein; KEGG: sil:SPO0160 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized protein family UPF0027 YP_004261988.1 COGs: COG2378 transcriptional regulator protein; KEGG: fjo:Fjoh_4751 transcriptional regulator-like protein; SPTR: uncharacterized protein YP_004261989.1 InterPro IPR004360: IPR017515; KEGG: fps:FP0237 lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Lactoylglutathione lyase and related lyase; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase YP_004261990.1 COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: fbc:FB2170_06195 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_004261991.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_06190 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; PFAM: Predicted permease YP_004261992.1 COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269: IPR004652; KEGG: fbc:FB2170_06185 TIM-barrel enzyme, possible dehydrogenase; PFAM: tRNA-dihydrouridine synthase; SPTR: TIM-barrel enzyme, possible dehydrogenase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family YP_004261993.1 COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: cat:CA2559_11308 flagellar motor protein MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: flagellar motor protein MotB; PFAM: OmpA family YP_004261994.1 COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein LepA; InterProIPR000795: IPR004161: IPR000640: IPR013842: IPR 005225: IPR006297; KEGG: fbc:FB2170_06155 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_004261995.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_1788 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Sensor histidine kinase; PFAM: Histidine kinase YP_004261996.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: sli:Slin_3170 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB dependent/ligand-gated channel YP_004261997.1 COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153: IPR003148; KEGG: rbi:RB2501_06990 Na(+):H(+) antiporter, CPA1 family protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Na(+):H(+) antiporter, CPA1 family protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family YP_004261998.1 InterPro IPR006016; KEGG: fbc:FB2170_06135 hypothetical protein; PFAM: UspA; SPTR: uncharacterized protein; PFAM: Universal stress protein family YP_004261999.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: fbc:FB2170_06130 sulfate transporter family protein; PFAM: Sulphate transporter; SPTR: Sulfate transporter family protein; PFAM: Sulfate transporter family YP_004262000.1 InterPro IPR001279; KEGG: fbc:FB2170_06125 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Metallo-beta-lactamase superfamily protein; PFAM: Metallo-beta-lactamase superfamily YP_004262001.1 COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: fbc:FB2170_06120 serine protease / subtilase peptidase; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Serine protease / subtilase peptidase; PFAM: Subtilase family YP_004262002.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_06115 Zn-dependent aminopeptidase, PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Zn-dependent aminopeptidase, ; PFAM: Peptidase family M1 YP_004262003.1 HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: fbc:FB2170_06100 ribonuclease P; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_004262004.1 COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: fbc:FB2170_06095 carboxy-terminal processing protease precursor; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_004262005.1 KEGG: she:Shewmr4_1112 hypothetical protein; SPTR: uncharacterized protein YP_004262006.1 KEGG: dar:Daro_1551 hypothetical protein; SPTR: uncharacterized protein YP_004262007.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064: IPR003646; KEGG: fbc:FB2170_06045 peptidase; PFAM: NLP/P60; SMART: SH3-like domain, bacterial; SPTR: peptidase; PFAM: NlpC/P60 family; Bacterial SH3 domain YP_004262008.1 KEGG: rbi:RB2501_06925 hypothetical protein; SPTR: uncharacterized protein YP_004262009.1 COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: fbc:FB2170_05985 probable acetyltransferase YybD; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004262010.1 COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: fbc:FB2170_05975 ribose 5-phosphate isomerase B, PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B, ; TIGRFAM: Ribose/galactose isomerase; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_004262011.1 KEGG: fbc:FB2170_05965 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2807) YP_004262012.1 COGs: COG1280 threonine efflux protein; InterPro IPR001123; KEGG: fbc:FB2170_05960 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: membrane protein; PFAM: LysE type translocator YP_004262013.1 InterPro IPR004176; KEGG: cts:Ctha_0300 ATPase AAA-2 domain protein; PFAM: Clp, N-terminal; SPTR: ATPase AAA-2 domain protein; PFAM: Clp amino terminal domain YP_004262014.1 COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157: IPR006156; KEGG: zpr:ZPR_0020 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase; SPTR: dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_004262015.1 InterPro IPR019861; KEGG: rbi:RB2501_06875 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004262016.1 InterPro IPR001434; KEGG: rbi:RB2501_06870 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF11; PFAM: BNR/Asp-box repeat YP_004262017.1 KEGG: cpv:cgd7_680 hypothetical protein; SPTR: uncharacterized protein YP_004262018.1 InterPro IPR019861; KEGG: fbc:FB2170_05935 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004262019.1 KEGG: rbi:RB2501_06860 hypothetical protein; SPTR: uncharacterized protein YP_004262020.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058: IPR020059: IPR004514; KEGG: fbc:FB2170_05925 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; PRIAM: Glutamine--tRNA ligase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_004262021.1 COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: fbc:FB2170_05920 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: GTP-binding protein LepA; PFAM: SPFH domain / Band 7 family YP_004262022.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058: IPR004527; KEGG: fbc:FB2170_05915 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_004262023.1 COGs: COG1196 Chromosome segregation ATPase; KEGG: fbc:FB2170_05905 hypothetical protein; SPTR: uncharacterized protein YP_004262024.1 COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; InterPro IPR002036; KEGG: fps:FP0002 hypothetical protein; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; SPTR: metalloprotease FP0002; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_004262025.1 COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR002218: IPR004416; KEGG: fbc:FB2170_05895 glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: Glucose-inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_004262026.1 KEGG: sbi:SORBI_01g045978 hypothetical protein; SPTR: uncharacterized protein YP_004262027.1 InterPro IPR013217; KEGG: fbc:FB2170_05890 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: uncharacterized protein; PFAM: Methyltransferase domain YP_004262028.1 InterPro IPR005632; KEGG: fbc:FB2170_05885 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: uncharacterized protein; PFAM: Outer membrane protein (OmpH-like) YP_004262029.1 KEGG: brm:Bmur_0910 hypothetical protein; SPTR: uncharacterized protein YP_004262030.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: cph:Cpha266_2350 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004262031.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: tel:tll1282 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004262032.1 COGs: COG3795 conserved hypothetical protein; InterPro IPR005545; KEGG: chu:CHU_2475 hypothetical protein; PFAM: YCII-related; SPTR: DGPFAETKE domain protein; PFAM: YCII-related domain YP_004262033.1 COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterPro IPR007627: IPR013249: IPR014284; KEGG: chu:CHU_2476 ECF subfamily RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: sigma factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004262034.1 COGs: COG2334 homoserine kinase type II (protein kinase fold); InterPro IPR002575; KEGG: dfe:Dfer_0292 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family YP_004262035.1 KEGG: fbc:FB2170_05880 hypothetical protein; SPTR: uncharacterized protein YP_004262036.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: fbc:FB2170_05875 DNA polymerase III, delta subunit; SPTR: DNA polymerase III, delta subunit YP_004262037.1 COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: fbc:FB2170_05870 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase YP_004262038.1 InterPro IPR008258: IPR018392: IPR002482; KEGG: fbc:FB2170_05865 membrane-bound lytic murein transglycosylase, PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Membrane-bound lytic murein transglycosylase, ; PFAM: Transglycosylase SLT domain; LysM domain YP_004262039.1 KEGG: rbi:RB2501_06780 hypothetical protein; SPTR: uncharacterized protein YP_004262040.1 KEGG: fbc:FB2170_04085 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004262041.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: fbc:FB2170_05845 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004262042.1 InterPro IPR003369: IPR006312; KEGG: cat:CA2559_02885 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Sec-independent protein translocase tatA/E homolog; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_004262043.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: rbi:RB2501_06755 peptidase; PFAM: Peptidase M23; SPTR: peptidase; PFAM: Peptidase family M23 YP_004262044.1 InterPro IPR004993; KEGG: fbc:FB2170_05830 auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: auxin-regulated protein; PFAM: GH3 auxin-responsive promoter YP_004262045.1 KEGG: rbi:RB2501_06745 hypothetical protein; SPTR: uncharacterized protein YP_004262046.1 KEGG: cat:CA2559_02905 hypothetical protein; SPTR: uncharacterized protein YP_004262047.1 COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509: IPR005888; KEGG: cat:CA2559_13118 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_004262048.1 COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005907; KEGG: zpr:ZPR_2100 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_004262049.1 COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: fps:FP2479 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_004262050.1 COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: fbc:FB2170_05800 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_004262051.1 COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: fjo:Fjoh_0358 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004262052.1 COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: coc:Coch_0699 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004262053.1 COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: cat:CA2559_13093 UDP-ManNAc dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-ManNAc dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004262054.1 InterPro IPR002797; KEGG: mru:mru_1524 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein YP_004262055.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cha:CHAB381_1475 AcbV; PFAM: Glycosyl transferase, group 1; SPTR: AcbV; PFAM: Glycosyl transferases group 1 YP_004262056.1 KEGG: ddf:DEFDS_0381 hypothetical protein; SPTR: uncharacterized protein YP_004262057.1 KEGG: cat:CA2559_02935 hypothetical protein; SPTR: uncharacterized protein; PFAM: O-Antigen ligase YP_004262058.1 COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: cha:CHAB381_1474 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (UDP-ManNAcA transferase); TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_004262059.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_05735 UDP-glucuronate decarboxylase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate decarboxylase; SPTR: UDP-glucuronate decarboxylase; PFAM: NAD dependent epimerase/dehydratase family YP_004262060.1 COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR020562: IPR020561: IPR020560: IPR000115; KEGG: fbc:FB2170_05730 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_004262061.1 KEGG: fbc:FB2170_05725 hypothetical protein; SPTR: uncharacterized protein YP_004262062.1 KEGG: fbc:FB2170_05720 hypothetical protein; SPTR: uncharacterized protein YP_004262063.1 KEGG: fbc:FB2170_05715 hypothetical protein; SPTR: uncharacterized protein YP_004262064.1 COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fbc:FB2170_05710 heptosyltransferase; PFAM: Glycosyl transferase, family 9; SPTR: Heptosyltransferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_004262065.1 InterPro IPR001647; KEGG: rbi:RB2501_06625 transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family YP_004262066.1 COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_04160 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2064) YP_004262067.1 COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_04165 outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004262068.1 KEGG: dfe:Dfer_1097 hypothetical protein; SPTR: uncharacterized protein YP_004262069.1 COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: stp:Strop_1316 inosine/uridine-preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; SPTR: Inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine-uridine preferring nucleoside hydrolase YP_004262070.1 COGs: COG4857 kinase; InterPro IPR002575; KEGG: rbi:RB2501_08800 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SPTR: Methylthioribose kinase; PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase YP_004262071.1 COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: rbi:RB2501_06605 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: uncharacterized protein; PFAM: Patatin-like phospholipase YP_004262072.1 COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333: IPR001433: IPR001041; KEGG: fbc:FB2170_05685 phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; PRIAM: Nitric oxide dioxygenase; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_004262073.1 COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fbc:FB2170_05680 hypothetical protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: uncharacterized protein; PFAM: Transcriptional regulator PadR-like family YP_004262074.1 KEGG: fbc:FB2170_05675 hypothetical protein; SPTR: uncharacterized protein YP_004262075.1 KEGG: fbc:FB2170_05675 hypothetical protein; SPTR: uncharacterized protein YP_004262076.1 KEGG: pfh:PFHG_01056 hypothetical protein; SPTR: uncharacterized protein YP_004262077.1 KEGG: fbc:FB2170_05670 hypothetical protein; SPTR: uncharacterized protein YP_004262078.1 KEGG: rbi:RB2501_06595 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004262079.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_05660 ATP-binding component of ABC transporter protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ATP-binding component of ABC transporter protein; PFAM: ABC transporter YP_004262080.1 InterPro IPR019734; KEGG: fbc:FB2170_05655 TPR domain protein; SPTR: TPR domain protein YP_004262081.1 COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: fbc:FB2170_05650 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF583 YP_004262082.1 KEGG: fbc:FB2170_05645 hypothetical protein; SPTR: uncharacterized protein YP_004262083.1 KEGG: fbc:FB2170_05640 hypothetical protein; SPTR: uncharacterized protein YP_004262084.1 COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATPase, F0 complex, subunit A; InterPro IPR000568; KEGG: fjo:Fjoh_1055 ATP synthase F0, A subunit; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_004262085.1 HAMAP: ATPase, F0 complex, subunit C; InterPro IPR002379: IPR005953: IPR000454; KEGG: fjo:Fjoh_1056 H+-transporting two-sector ATPase, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: uncharacterized protein; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_004262086.1 COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; InterPro IPR002146: IPR005864; KEGG: fbc:FB2170_05620 ATP synthase F0, subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: ATP synthase subunit b; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_004262087.1 COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: fbc:FB2170_05615 ATP synthase subunit D; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit D; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_004262088.1 COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR004100: IPR000194: IPR000793: IPR005294; KEGG: rbi:RB2501_06545 F0F1 ATP synthase subunit alpha; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_004262089.1 COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATPase, F1 complex, gamma subunit; InterPro IPR000131; KEGG: fbc:FB2170_05605 H+-transporting two-sector ATPase, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_004262090.1 KEGG: rbi:RB2501_06535 hypothetical protein; SPTR: uncharacterized protein YP_004262091.1 InterPro IPR002797: IPR002528; KEGG: fbc:FB2170_05600 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; Multi antimicrobial extrusion protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein YP_004262092.1 COGs: COG0756 dUTPase; HAMAP: DeoxyUTP pyrophosphatase; InterPro IPR008180: IPR008181; KEGG: fjo:Fjoh_1063 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_004262093.1 COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: fjo:Fjoh_1064 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form YP_004262094.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_01871 OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB; PFAM: OmpA family YP_004262095.1 COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865: IPR000994; KEGG: fbc:FB2170_05355 Xaa-Pro aminopeptidase; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase; PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_004262096.1 InterPro IPR002860; KEGG: rbi:RB2501_06350 hypothetical protein; PFAM: BNR repeat; SPTR: uncharacterized protein; PFAM: BNR/Asp-box repeat YP_004262097.1 KEGG: coc:Coch_1883 hypothetical protein; SPTR: uncharacterized protein YP_004262098.1 COGs: COG1858 Cytochrome c peroxidase; InterPro IPR018976: IPR004852; KEGG: rbi:RB2501_15404 di-heme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; Peptidase M75, Imelysin; PRIAM: Cytochrome-c peroxidase; SPTR: Methylamine utilization protein/Cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004262099.1 KEGG: rbi:RB2501_15409 hypothetical protein; SPTR: uncharacterized protein YP_004262100.1 COGs: COG3608 deacylase; InterPro IPR007036; KEGG: fbc:FB2170_05390 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family YP_004262101.1 COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651: IPR004666; KEGG: fbc:FB2170_05395 ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family YP_004262102.1 InterPro IPR011138; KEGG: fbc:FB2170_05400 succinate dehydrogenase, cytochrome b558 subunit; SPTR: Succinate dehydrogenase, cytochrome b558 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_004262103.1 COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953: IPR004112: IPR011280; KEGG: fbc:FB2170_05405 succinate dehydrogenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup YP_004262104.1 COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041; KEGG: fbc:FB2170_05410 succinate dehydrogenase; PFAM: Ferredoxin; SPTR: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004262105.1 KEGG: fbc:FB2170_05425 hypothetical protein; SPTR: uncharacterized protein; PFAM: Thioredoxin YP_004262106.1 COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165: IPR012791; KEGG: cat:CA2559_03100 3-oxoadipate CoA-succinyl transferase, beta subunit; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_004262107.1 KEGG: fbc:FB2170_05460 hypothetical protein; SPTR: uncharacterized protein YP_004262108.1 COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165: IPR012792; KEGG: fbc:FB2170_05465 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: 3-oxoacid CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_004262109.1 COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: rbi:RB2501_06430 penicillin-binding protein 1A (PBP-1a); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A (PBP-1a); PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase YP_004262110.1 InterPro IPR020018; KEGG: fbc:FB2170_05475 gliding motility protein; SPTR: gliding motility protein; TIGRFAM: Gliding motility-associated lipoprotein, GldH; TIGRFAM: gliding motility-associated lipoprotein GldH YP_004262111.1 COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: fjo:Fjoh_0891 PSP1 domain-containing protein; PFAM: PSP1, C-terminal; SPTR: uncharacterized protein; PFAM: PSP1 C-terminal conserved region YP_004262112.1 COGs: COG1054 sulfurtransferase; HAMAP: Uncharacterised protein family UPF0176; InterPro IPR001763: IPR020936; KEGG: fbc:FB2170_05490 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: UPF0176 protein KAOT1_17728; PFAM: Rhodanese-like domain YP_004262113.1 COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765: IPR003593; KEGG: fbc:FB2170_05505 recombinase A; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_004262114.1 KEGG: fbc:FB2170_05510 hypothetical protein; SPTR: uncharacterized protein YP_004262115.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: rbi:RB2501_06465 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004262116.1 KEGG: rbi:RB2501_06470 hypothetical protein; SPTR: uncharacterized protein YP_004262117.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05530 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004262118.1 COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305: IPR002306; KEGG: fbc:FB2170_05535 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_004262119.1 COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774: IPR001179; KEGG: pmz:HMPREF0659_A5083 outer membrane protein MIP; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_004262120.1 COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: gfo:GFO_3252 smf family protein; PFAM: DNA recombination-mediator protein A; SPTR: Smf family protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_004262121.1 InterPro IPR007730; KEGG: fbc:FB2170_05560 hypothetical protein; PFAM: Sporulation-related domain; SPTR: uncharacterized protein; PFAM: Sporulation related domain YP_004262122.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: gfo:GFO_3254 acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily YP_004262123.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_00175 oxidoreductase, short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase YP_004262124.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cpi:Cpin_7147 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: transcriptional regulator protein, tetR family; PFAM: Bacterial regulatory proteins, tetR family YP_004262125.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: sha:SH1065 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Possible Estradiol 17-beta-dehydrogenase; PFAM: short chain dehydrogenase YP_004262126.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: bmq:BMQ_pBM70058 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family YP_004262127.1 COGs: COG1359 conserved hypothetical protein; InterPro IPR007138; KEGG: cpi:Cpin_6672 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase YP_004262128.1 COGs: COG2855 membrane protein; InterPro IPR018383; KEGG: fjo:Fjoh_2884 hypothetical protein; PFAM: Uncharacterised protein family UPF0324, prokaryote; SPTR: TPR repeat protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_004262129.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: cts:Ctha_1838 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: LysR substrate binding domain protein; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004262130.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR003313: IPR000005: IPR018060; KEGG: zpr:ZPR_1018 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_004262131.1 KEGG: zpr:ZPR_1019 hypothetical protein; SPTR: uncharacterized protein YP_004262132.1 InterPro IPR004360; KEGG: swp:swp_4885 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004262133.1 KEGG: mfv:Mfer_0098 anthranilate synthase, component I; SPTR: uncharacterized protein ycf1 YP_004262134.1 COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198: IPR020842; KEGG: bss:BSUW23_09850 oxido-reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: short chain dehydrogenase YP_004262135.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_4669 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; PFAM: Histidine kinase; Cache domain YP_004262136.1 KEGG: fjo:Fjoh_4670 hypothetical protein; SPTR: uncharacterized protein YP_004262137.1 InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_4671 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: SusC-like TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262138.1 InterPro IPR012944; KEGG: fjo:Fjoh_4672 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004262139.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fjo:Fjoh_4674 LytTR family two component transcriptional regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004262140.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: zpr:ZPR_4646 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase (GNAT) family protein; manually curated; PFAM: Acetyltransferase (GNAT) family YP_004262141.1 KEGG: fjo:Fjoh_4135 hypothetical protein; SPTR: uncharacterized protein YP_004262142.1 COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: rbi:RB2501_12137 hypothetical protein; SPTR: uncharacterized protein; PFAM: NmrA-like family YP_004262143.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR003313: IPR000005: IPR018060; KEGG: swd:Swoo_2362 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262144.1 COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cat:CA2559_11163 hypothetical protein; PFAM: Transglutaminase-like; SPTR: uncharacterized protein; PFAM: Transglutaminase-like superfamily YP_004262145.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: dfe:Dfer_0072 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Aldehyde dehydrogenase, NAD+; PFAM: Aldehyde dehydrogenase family YP_004262146.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: fps:FP1757 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262147.1 InterPro IPR010432; KEGG: ppm:PPSC2_c0280 hypothetical membrane protein; PFAM: RDD; SPTR: uncharacterized protein; PFAM: RDD family YP_004262148.1 InterPro IPR001440: IPR019734; KEGG: tet:TTHERM_00225820 TPR Domain containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: TPR Domain containing protein YP_004262149.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: phe:Phep_1488 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; PFAM: Fatty acid hydroxylase superfamily YP_004262150.1 KEGG: tet:TTHERM_00157870 hypothetical protein; SPTR: uncharacterized protein YP_004262151.1 KEGG: cpi:Cpin_6152 hypothetical protein; SPTR: uncharacterized protein; PFAM: Family of unknown function (DUF695) YP_004262152.1 KEGG: cat:CA2559_02565 hypothetical protein; SPTR: uncharacterized protein YP_004262153.1 KEGG: pin:Ping_0266 outer membrane protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2608) YP_004262154.1 KEGG: mmz:MmarC7_0013 hypothetical protein; SPTR: uncharacterized protein YP_004262155.1 KEGG: fjo:Fjoh_3792 hypothetical protein; SPTR: uncharacterized protein YP_004262156.1 COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: fjo:Fjoh_3791 esterase; PFAM: esterase; SPTR: esterase; PFAM: esterase YP_004262157.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; KEGG: fjo:Fjoh_3790 CRP/FNR family transcriptional regulator; SPTR: transcriptional regulator, Crp/Fnr family YP_004262158.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: coc:Coch_1204 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family YP_004262159.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: ttu:TERTU_2036 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase YP_004262160.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: sli:Slin_4331 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator araC family protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262161.1 KEGG: bwe:BcerKBAB4_2737 hypothetical protein; SPTR: uncharacterized protein YP_004262162.1 KEGG: sma:SAV_3861 hypothetical protein; SPTR: uncharacterized protein YP_004262163.1 KEGG: ngr:NAEGRDRAFT_74210 hypothetical protein; SPTR: uncharacterized protein YP_004262164.1 KEGG: mru:mru_0286 hypothetical protein; SPTR: uncharacterized protein YP_004262165.1 InterPro IPR007921; KEGG: pay:PAU_02437 trypanothione synthetase domain protein precursor; PFAM: Cysteine, histidine-dependent amidohydrolase/peptidase; SPTR: Glutathione synthetase; PFAM: CHAP domain YP_004262166.1 KEGG: plm:Plim_1249 hypothetical protein; SPTR: Polyketide cyclase/dehydrase YP_004262167.1 KEGG: dfe:Dfer_5356 YCII-related protein; SPTR: YCII-related protein; PFAM: YCII-related domain YP_004262168.1 KEGG: bph:Bphy_6690 hypothetical protein; SPTR: uncharacterized protein YP_004262169.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fba:FIC_00975 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding domain YP_004262170.1 KEGG: cla:Cla_a006 hypothetical protein; SPTR: uncharacterized protein YP_004262171.1 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: zpr:ZPR_3308 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF477) YP_004262172.1 KEGG: tpv:TP02_0596 hypothetical protein; SPTR: uncharacterized protein YP_004262173.1 KEGG: cin:100185362 similar to Lipoma HMGIC fusion partner-like 2 protein; SPTR: Metal ion ABC superfamily ATP binding cassette transporter, membrane protein YP_004262174.1 KEGG: zpr:ZPR_3172 hypothetical protein; SPTR: uncharacterized protein YP_004262175.1 KEGG: bta:510640 complement factor H-like; SPTR: uncharacterized protein YP_004262176.1 KEGG: cpi:Cpin_2630 hypothetical protein; SPTR: transmembrane protein YP_004262177.1 KEGG: fbc:FB2170_11051 hypothetical protein; SPTR: uncharacterized protein YP_004262178.1 KEGG: pfh:PFHG_03932 conserved hypothetical protein; SPTR: uncharacterized protein YP_004262179.1 KEGG: bmq:BMQ_1738 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004262180.1 KEGG: cpv:cgd6_5520 peptidase'insulinase like peptidase'; SPTR: Zinc protease, possible YP_004262181.1 KEGG: pyo:PY02733 hypothetical protein YP_004262182.1 KEGG: pyo:PY03959 hypothetical protein; SPTR: uncharacterized protein YP_004262183.1 KEGG: cts:Ctha_1461 peptidase S45 penicillin amidase; SPTR: Peptidase S45 penicillin amidase YP_004262184.1 KEGG: dmo:Dmoj_GI15813 GI15813 gene product from transcript GI15813-RA; SPTR: uncharacterized protein YP_004262185.1 KEGG: ftn:FTN_1566 hypothetical protein; SPTR: Hypothetical membrane protein YP_004262186.1 KEGG: ptm:GSPATT00025874001 hypothetical protein; SPTR: Stage 0 sporulation protein J YP_004262187.1 KEGG: lby:Lbys_0819 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2750) YP_004262188.1 KEGG: cla:Cla_a006 hypothetical protein; SPTR: uncharacterized protein YP_004262189.1 KEGG: fjo:Fjoh_0923 hypothetical protein; SPTR: uncharacterized protein YP_004262190.1 KEGG: rpt:Rpal_0839 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3732) YP_004262191.1 KEGG: psb:Psyr_3808 hypothetical protein; SPTR: uncharacterized protein YP_004262192.1 KEGG: rpt:Rpal_0841 hypothetical protein; SPTR: uncharacterized protein YP_004262193.1 KEGG: tpv:TP02_0596 hypothetical protein; SPTR: uncharacterized protein YP_004262194.1 KEGG: smu:SMU.207c transposon protein YP_004262195.1 KEGG: pyo:PY01526 rhoptry protein; SPTR: Periplasmic binding protein YP_004262196.1 KEGG: ftn:FTN_1566 hypothetical protein; SPTR: Hypothetical membrane protein YP_004262197.1 KEGG: ptm:GSPATT00025874001 hypothetical protein; SPTR: Stage 0 sporulation protein J YP_004262198.1 KEGG: zpr:ZPR_2941 hypothetical protein; SPTR: uncharacterized protein YP_004262199.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cts:Ctha_0890 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase family; TIGRFAM: integron integrase YP_004262200.1 KEGG: zpr:ZPR_3271 hypothetical protein; SPTR: uncharacterized protein YP_004262201.1 COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_05580 peptidase; PFAM: Peptidase M23; SPTR: peptidase; PFAM: Peptidase family M23 YP_004262202.1 KEGG: fbc:FB2170_05585 deoxyuridine 5'-triphosphate nucleotidohydrolase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004262203.1 InterPro IPR001440: IPR019734; KEGG: rbi:RB2501_06520 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: uncharacterized protein YP_004262204.1 COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: fbc:FB2170_05320 branched-chain amino acid transport system carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: Branched-chain amino acid transport system carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier YP_004262205.1 KEGG: rbi:RB2501_05890 hypothetical protein; SPTR: uncharacterized protein YP_004262206.1 COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728: IPR010918: IPR006283; KEGG: fbc:FB2170_05310 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PRIAM: Thiamine-phosphate kinase; SPTR: thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_004262207.1 COGs: COG0316 conserved hypothetical protein; InterPro IPR016092: IPR000361; KEGG: fbc:FB2170_05290 scaffold protein for iron-sulfur cluster assembly; PFAM: FeS cluster biogenesis; SPTR: Scaffold protein for iron-sulfur cluster assembly; TIGRFAM: FeS cluster insertion; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_004262208.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231: IPR000825; KEGG: fbc:FB2170_05285 hypothetical protein; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: uncharacterized protein; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_004262209.1 COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230: IPR003593: IPR003439; KEGG: cat:CA2559_04455 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_004262210.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR011542: IPR000825; KEGG: fbc:FB2170_05275 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1 YP_004262211.1 COGs: COG0520 Selenocysteine lyase; InterPro IPR010970: IPR000192; KEGG: fbc:FB2170_05270 cysteine desulphurase SufS; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Selenocysteine lyase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily YP_004262212.1 COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: fbc:FB2170_05265 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: uncharacterized protein; PFAM: Fe-S metabolism associated domain YP_004262213.1 COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: rbi:RB2501_05940 hypothetical protein; PFAM: Domain of unknown function DUF59; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein YP_004262214.1 InterPro IPR018914; KEGG: fbc:FB2170_05255 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2480) YP_004262215.1 KEGG: fbc:FB2170_05250 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3078) YP_004262216.1 KEGG: fbc:FB2170_04420 hypothetical protein; SPTR: uncharacterized protein YP_004262217.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_04415 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YP_004262218.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_04410 peptidase, M20/M25/M40 family protein; PFAM: Peptidase M28; SPTR: Peptidase, M20/M25/M40 family protein; PFAM: Peptidase family M28 YP_004262219.1 COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: fbc:FB2170_04405 CBS domain protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; PFAM: CBS domain YP_004262220.1 KEGG: fbc:FB2170_04400 hypothetical protein; SPTR: uncharacterized protein YP_004262221.1 InterPro IPR001646; KEGG: fbc:FB2170_04390 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: uncharacterized protein; PFAM: Pentapeptide repeats (8 copies) YP_004262222.1 KEGG: mvo:Mvol_0712 protein of unknown function DUF553; SPTR: Uncharacterized protein FPV220 YP_004262223.1 KEGG: cat:CA2559_06285 hypothetical protein; SPTR: uncharacterized protein YP_004262224.1 KEGG: lbf:LBF_2726 TPR repeat-containing protein; SPTR: uncharacterized protein YP_004262225.1 KEGG: cdl:CDR20291_2889 ABC transporter, permease; SPTR: ABC transporter, permease YP_004262226.1 KEGG: cpi:Cpin_5609 hypothetical protein; SPTR: uncharacterized protein YP_004262227.1 KEGG: phe:Phep_0230 hypothetical protein; SPTR: uncharacterized protein YP_004262228.1 KEGG: edi:EDI_290600 hypothetical protein; SPTR: uncharacterized protein YP_004262229.1 KEGG: dha:DEHA2D06908g DEHA2D06908p; SPTR: DEHA2D06908p YP_004262230.1 InterPro IPR001611; KEGG: bhy:BHWA1_01177 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: Leucine-rich repeat containing protein; PFAM: Leucine Rich Repeat YP_004262231.1 KEGG: caa:Caka_2897 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1444) YP_004262232.1 KEGG: pbe:PB000171.01.0 hypothetical protein; SPTR: uncharacterized protein YP_004262233.1 KEGG: tcx:Tcr_0335 hypothetical protein; SPTR: uncharacterized protein YP_004262234.1 InterPro IPR004360; KEGG: fbc:FB2170_00650 glyoxalase/dioxygenase superfamily protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/dioxygenase superfamily protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004262235.1 COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); KEGG: fbc:FB2170_01896 hypothetical protein; SPTR: uncharacterized protein YP_004262236.1 InterPro IPR002860; KEGG: fbc:FB2170_05125 hypothetical protein; PFAM: BNR repeat; SPTR: uncharacterized protein; PFAM: BNR/Asp-box repeat YP_004262237.1 COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: fbc:FB2170_05100 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: uncharacterized protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein YP_004262238.1 COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: fbc:FB2170_05140 ferrochelatase; PFAM: Ferrochelatase; PRIAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_004262239.1 COGs: COG3735 conserved hypothetical protein; InterPro IPR010891; KEGG: chu:CHU_2340 hypothetical protein; PFAM: GumN predicted; SPTR: uncharacterized protein; PFAM: GumN protein YP_004262240.1 InterPro IPR010846; KEGG: rbi:RB2501_06030 hypothetical protein; PFAM: Protein of unknown function DUF1460; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1460) YP_004262241.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: fbc:FB2170_05150 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262242.1 COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343: IPR015895: IPR006151: IPR015896; KEGG: fbc:FB2170_05155 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; PRIAM: Glutamyl-tRNA reductase; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_004262243.1 COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860: IPR022417: IPR022418: IPR003754; KEGG: fbc:FB2170_05160 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Porphobilinogen deaminase (HemC); TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; Uroporphyrinogen-III synthase HemD; TIGRFAM: porphobilinogen deaminase YP_004262244.1 COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361: IPR000257; KEGG: fbc:FB2170_05165 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_004262245.1 KEGG: cat:CA2559_03625 hypothetical protein; SPTR: uncharacterized protein YP_004262246.1 COGs: COG2981 Uncharacterized protein involved in cysteine biosynthesis; InterPro IPR007496; KEGG: cat:CA2559_03620 hypothetical protein; PFAM: Uncharacterised protein family CysZ; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF540) YP_004262247.1 COGs: COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; InterPro IPR004370; KEGG: fbc:FB2170_00320 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase YP_004262248.1 KEGG: fjo:Fjoh_0947 hypothetical protein; SPTR: uncharacterized protein YP_004262249.1 COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260; KEGG: fbc:FB2170_05175 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; PRIAM: Coproporphyrinogen oxidase; SPTR: Coproporphyrinogen III oxidase, aerobic; PFAM: Coproporphyrinogen III oxidase YP_004262250.1 COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: rbi:RB2501_10307 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: uncharacterized protein; PFAM: Fasciclin domain YP_004262251.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: sli:Slin_4874 hypothetical protein; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: uncharacterized protein; PFAM: Peptidase family M1 YP_004262252.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: saz:Sama_1187 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter YP_004262253.1 COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001: IPR006935; KEGG: fbc:FB2170_05195 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; SPTR: uncharacterized protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_004262254.1 COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: fbc:FB2170_05200 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase YP_004262255.1 KEGG: tet:TTHERM_00492370 Protein kinase domain containing protein; SPTR: Chromatin remodeling complex subunit YP_004262256.1 KEGG: mxa:MXAN_3814 hypothetical protein; SPTR: Short chain dehydrogenase YP_004262257.1 InterPro IPR005181; KEGG: zpr:ZPR_1024 esterase; PFAM: Domain of unknown function DUF303, acetylesterase SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF303) YP_004262258.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: cpi:Cpin_6108 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262259.1 KEGG: cat:CA2559_06300 hypothetical protein; SPTR: uncharacterized protein YP_004262260.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644; KEGG: fbc:FB2170_05210 hypothetical protein; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; SPTR: uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21 YP_004262261.1 COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_05215 methylated-DNA--protein-cysteine S-methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_004262262.1 KEGG: rbi:RB2501_13599 hypothetical protein; SPTR: uncharacterized protein YP_004262263.1 InterPro IPR019288; KEGG: fbc:FB2170_05225 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: uncharacterized protein; PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_004262264.1 COGs: COG2374 extracellular nuclease; InterPro IPR005135; KEGG: fbc:FB2170_05240 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family YP_004262265.1 COGs: COG2262 GTPase; InterPro IPR016496: IPR005225: IPR002917; KEGG: fbc:FB2170_05245 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain YP_004262266.1 KEGG: fbc:FB2170_04425 hypothetical protein; SPTR: uncharacterized protein YP_004262267.1 KEGG: cat:CA2559_04740 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: conserved hypothetical protein YP_004262268.1 KEGG: fbc:FB2170_04445 hypothetical protein; SPTR: uncharacterized protein YP_004262269.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_04450 oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: L-threonine 3-dehydrogenase; SPTR: oxidoreductase; PFAM: NAD dependent epimerase/dehydratase family YP_004262270.1 KEGG: rbi:RB2501_05250 hypothetical protein; SPTR: uncharacterized protein YP_004262271.1 COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR023045: IPR002820; KEGG: dfe:Dfer_3066 bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain; SPTR: Molybdenum cofactor synthesis domain protein; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_004262272.1 COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: rbi:RB2501_05280 molybdopterinconverting factor, subunit; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterinconverting factor, subunit; PFAM: MoaE protein YP_004262273.1 COGs: COG3590 metalloendopeptidase; InterPro IPR008753: IPR018497; KEGG: cat:CA2559_03930 peptidase, M13 family (lipoprotein); PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal; PRIAM: Endothelin-converting enzyme 1; SPTR: Metalloendopeptidase PepO; PFAM: Peptidase family M13 YP_004262274.1 COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fjo:Fjoh_2770 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor YP_004262275.1 InterPro IPR008756; KEGG: fbc:FB2170_01347 hypothetical protein; PFAM: Peptidase M56, BlaR1; SPTR: uncharacterized protein; PFAM: BlaR1 peptidase M56 YP_004262276.1 InterPro IPR012910; KEGG: fjo:Fjoh_4255 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; SPTR: Peptidase M56 BlaR1; PFAM: TonB-dependent Receptor Plug Domain YP_004262277.1 InterPro IPR013740; KEGG: pdi:BDI_1798 hypothetical protein; PFAM: Redoxin; SPTR: Peroxiredoxin; PFAM: Redoxin YP_004262278.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: cat:CA2559_08406 succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Succinate-semialdehyde dehydrogenase (NAD(P)(+)); SPTR: Succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004262279.1 KEGG: cat:CA2559_12788 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF748) YP_004262280.1 KEGG: cat:CA2559_10508 hypothetical protein; SPTR: uncharacterized protein YP_004262281.1 KEGG: cat:CA2559_01355 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF748) YP_004262282.1 KEGG: lby:Lbys_3322 hypothetical protein; SPTR: uncharacterized protein YP_004262283.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dfe:Dfer_3618 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; PFAM: Predicted permease YP_004262284.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dfe:Dfer_3619 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004262285.1 COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: zpr:ZPR_2251 small-conductance mechanosensitive ion channel protein; PFAM: Mechanosensitive ion channel MscS; SPTR: mechanosensitive channel protein (MscS family protein); PFAM: Mechanosensitive ion channel YP_004262286.1 COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: rbi:RB2501_15089 DPS family protein; PFAM: Ferritin/Dps protein; SPTR: DPS family protein; PFAM: Ferritin-like domain YP_004262287.1 HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: fjo:Fjoh_4310 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1328) YP_004262288.1 InterPro IPR012556; KEGG: gfo:GFO_0356 secreted protein; PFAM: Entericidin EcnAB; SPTR: uncharacterized protein YP_004262289.1 KEGG: gfo:GFO_1631 secreted protein; SPTR: uncharacterized protein YP_004262290.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12341 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004262291.1 COGs: COG0793 Periplasmic protease; InterPro IPR004447: IPR005151; KEGG: fbc:FB2170_05045 carboxy-terminal processing protease precursor; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_004262292.1 COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: fbc:FB2170_05050 deoxycytidylate deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Deoxycytidylate deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004262293.1 KEGG: fbc:FB2170_05055 hypothetical protein; SPTR: uncharacterized protein YP_004262294.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: rbi:RB2501_05835 heat shock protein DnaJ-like protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ-like protein; PFAM: DnaJ domain; Tellurite resistance protein TerB YP_004262295.1 InterPro IPR009474; KEGG: fbc:FB2170_05065 hypothetical protein; PFAM: Uncharacterised protein family UPF0403; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1094) YP_004262296.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05070 1-acyl-sn-glycerol-3-phosphate acetyltransferase, PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acetyltransferase, ; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004262297.1 COGs: COG1418 HD superfamily hydrolase; InterPro IPR003607: IPR006674; KEGG: fbc:FB2170_05075 hydrolase, HD family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Hydrolase, HD family protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_004262298.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR000683; KEGG: rbi:RB2501_05855 dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_004262299.1 COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: zpr:ZPR_1443 predicted dithiol-disulfide isomerase; PFAM: DSBA-like thioredoxin domain; SPTR: Predicted dithiol-disulfide isomerase; PFAM: DSBA-like thioredoxin domain YP_004262300.1 KEGG: dre:259250 trh1 protein; SPTR: membrane protein YP_004262301.1 COGs: COG1533 DNA repair photolyase; InterPro IPR006638: IPR007197; KEGG: fbc:FB2170_05080 radical SAM; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM; PFAM: Radical SAM superfamily YP_004262302.1 KEGG: fbc:FB2170_05085 hypothetical protein; SPTR: uncharacterized protein YP_004262303.1 COGs: COG4146 symporter; InterPro IPR019900: IPR001734; KEGG: gfo:GFO_2149 symporter YidK; PFAM: Sodium/solute symporter; SPTR: sodium/myo-inositol cotransporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_004262304.1 KEGG: fbc:FB2170_03455 hypothetical protein; SPTR: uncharacterized protein YP_004262305.1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: fbc:FB2170_03450 TonB; PFAM: Peptidase M56, BlaR1; SPTR: uncharacterized protein; PFAM: BlaR1 peptidase M56 YP_004262306.1 COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fjo:Fjoh_1362 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: antibiotic resistance-related regulatory protein, Penicillinase repressor family; PFAM: Penicillinase repressor YP_004262307.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: fbc:FB2170_03435 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Beta-Ala-His dipeptidase; SPTR: succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_004262308.1 COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: fbc:FB2170_15383 oxidoreductase, 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase superfamily YP_004262309.1 KEGG: cat:CA2559_01560 alpha/beta hydrolase superfamily protein; SPTR: Alpha/beta hydrolase superfamily protein YP_004262310.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_0982 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_004262311.1 COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764: IPR001036; KEGG: fjo:Fjoh_4408 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_004262312.1 COGs: COG1538 Outer membrane protein; InterPro IPR010131: IPR003423; KEGG: cpi:Cpin_5181 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_004262313.1 KEGG: fbc:FB2170_03320 hypothetical protein; SPTR: uncharacterized protein YP_004262314.1 COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: fbc:FB2170_03305 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_004262315.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_03300 pigmentation and extracellular proteinase regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Pigmentation and extracellular proteinase regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_004262316.1 COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886: IPR001509; KEGG: fbc:FB2170_03295 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_004262317.1 KEGG: fbc:FB2170_03285 hypothetical protein; SPTR: uncharacterized protein YP_004262318.1 COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661: IPR003594: IPR003660; KEGG: rbi:RB2501_05875 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensory transduction histidine kinase; manually curated; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004262319.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_05090 enoyl-CoA hydratase; PFAM: Crotonase, core; PRIAM: Enoyl-CoA hydratase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family YP_004262320.1 KEGG: fbc:FB2170_08119 hypothetical protein; SPTR: uncharacterized protein YP_004262321.1 InterPro IPR004843; KEGG: fbc:FB2170_08114 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein YP_004262322.1 InterPro IPR006674; KEGG: rbi:RB2501_08535 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: uncharacterized protein; PFAM: HD domain YP_004262323.1 KEGG: fbc:FB2170_08104 hypothetical protein; SPTR: uncharacterized protein YP_004262324.1 KEGG: fbc:FB2170_08099 hypothetical protein; SPTR: uncharacterized protein YP_004262325.1 KEGG: tva:TVAG_007510 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein YP_004262326.1 COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: mhr:MHR_0071 cytosine-specific methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); DNA binding domain, excisionase family YP_004262327.1 KEGG: cat:CA2559_02990 hypothetical protein; SPTR: uncharacterized protein YP_004262328.1 COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225: IPR003373: IPR002917: IPR011619: IPR 011642: IPR011640; KEGG: fbc:FB2170_04635 hypothetical protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: uncharacterized protein; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_004262329.1 COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: fbc:FB2170_04630 probable ferrous iron transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: Probable ferrous iron transport protein A; PFAM: FeoA domain YP_004262330.1 COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_04625 hypothetical protein; PFAM: Copper chaperone SCO1/SenC; SPTR: uncharacterized protein; PFAM: SCO1/SenC YP_004262331.1 COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387: IPR001478: IPR008915; KEGG: fba:FIC_00095 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; SPTR: Membrane-associated zinc metalloprotease; TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_004262332.1 KEGG: chu:CHU_1672 hypothetical protein; SPTR: uncharacterized protein YP_004262333.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: zpr:ZPR_3178 TetR family regulatory protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR family regulatory protein; PFAM: Bacterial regulatory proteins, tetR family YP_004262334.1 COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: zpr:ZPR_3177 protein containing hemopexin repeats; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Protein containing hemopexin repeats; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_004262335.1 InterPro IPR012910: IPR000531; KEGG: cpi:Cpin_6791 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004262336.1 KEGG: zpr:ZPR_3174 hypothetical protein; SPTR: uncharacterized protein YP_004262337.1 KEGG: rbi:RB2501_05660 nicotinic acid mononucleotide adenyltransferase; SPTR: uncharacterized protein; PFAM: MORN repeat variant YP_004262338.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR017690: IPR012910: IPR000531; KEGG: sde:Sde_2289 outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262339.1 COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524: IPR004365: IPR004364: IPR004115; KEGG: cat:CA2559_01940 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_004262340.1 COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807: IPR000644; KEGG: gfo:GFO_3091 voltage gated chloride channel; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: chloride channel protein; PFAM: CBS domain; Voltage gated chloride channel YP_004262341.1 KEGG: fbc:FB2170_04795 hypothetical protein; SPTR: uncharacterized protein YP_004262342.1 COGs: COG1278 Cold shock protein; InterPro IPR011129: IPR002059; KEGG: fbc:FB2170_04800 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: uncharacterized protein; PFAM: 'Cold-shock' DNA-binding domain YP_004262343.1 COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: fbc:FB2170_04805 cytosine/adenosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: cytosine/adenosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004262344.1 COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005477: IPR005475: IPR005476; KEGG: fbc:FB2170_04810 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_004262345.1 KEGG: fbc:FB2170_04815 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3078) YP_004262346.1 COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006261: IPR003607: IPR006674; KEGG: fbc:FB2170_04850 dGTP triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; PRIAM: dGTPase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: dGTP triphosphohydrolase; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase YP_004262347.1 InterPro IPR010870; KEGG: fbc:FB2170_04855 phosphate-selective porin O and P; PFAM: Phosphate-selective porin O/P; SPTR: Phosphate-selective porin O and P; PFAM: Phosphate-selective porin O and P YP_004262348.1 COGs: COG0306 Phosphate/sulphate permease; KEGG: fbc:FB2170_04910 phosphate sodium symporter; SPTR: Phosphate sodium symporter; PFAM: Phosphate transporter family YP_004262349.1 KEGG: tet:TTHERM_00790580 Protein kinase domain containing protein; SPTR: Protein kinase domain containing protein YP_004262350.1 KEGG: fbc:FB2170_04915 hypothetical protein; SPTR: uncharacterized protein YP_004262351.1 KEGG: cat:CA2559_11328 hypothetical protein; SPTR: uncharacterized protein YP_004262352.1 KEGG: ctc:CTC01960 membrane associated protein; SPTR: Lipoprotein YP_004262353.1 COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; InterPro IPR005248: IPR004821: IPR004820; KEGG: fbc:FB2170_04935 nicotinic acid mononucleotide adenyltransferase; PFAM: Cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_004262354.1 COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR017665: IPR008145: IPR008144; KEGG: fbc:FB2170_04940 guanylate kinase; PFAM: Guanylate kinase; PRIAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_004262355.1 COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR005229: IPR013527: IPR013551; KEGG: fbc:FB2170_04945 hypothetical protein; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255 YP_004262356.1 InterPro IPR010496; KEGG: rbi:RB2501_05690 multi-domain protein; PFAM: Protein of unknown function DUF1080; SPTR: multi-domain protein; PFAM: Domain of Unknown Function (DUF1080) YP_004262357.1 InterPro IPR010496; KEGG: rbi:RB2501_05695 probable secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080) YP_004262358.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: rbi:RB2501_05700 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: uncharacterized protein; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_004262359.1 COGs: COG4405 conserved hypothetical protein; InterPro IPR007374; KEGG: fbc:FB2170_04955 hypothetical protein; PFAM: ASCH domain; SPTR: uncharacterized protein; PFAM: ASCH domain YP_004262360.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rbi:RB2501_05720 oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_004262361.1 InterPro IPR012307; KEGG: fbc:FB2170_04975 AP endonuclease, family 2; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; PFAM: Xylose isomerase-like TIM barrel YP_004262362.1 COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076: IPR000172; KEGG: rbi:RB2501_05745 oxidoreductase, GMC family protein; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; PFAM: GMC oxidoreductase YP_004262363.1 KEGG: fbc:FB2170_04985 hypothetical protein; SPTR: uncharacterized protein YP_004262364.1 COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311: IPR012307; KEGG: fbc:FB2170_04990 probable glyoxylate-induced protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004262365.1 InterPro IPR013346: IPR005144: IPR013509: IPR000788; KEGG: fbc:FB2170_05000 probable ribonucleoside-diphosphate reductase large chain; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_004262366.1 COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: rbi:RB2501_05775 probable ribonucleoside-diphosphate reductase small chain; PFAM: Ribonucleotide reductase; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Probable ribonucleoside-diphosphate reductase small chain; PFAM: Ribonucleotide reductase, small chain YP_004262367.1 KEGG: eca:ECA2458 AraC family transcriptional regulator; SPTR: AraC-family transcriptional regulator YP_004262368.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_05020 autolysin response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Autolysin response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004262369.1 COGs: COG3275 regulator of cell autolysis; InterProIPR019734: IPR001440: IPR013105: IPR010559: IPR 003594; KEGG: fbc:FB2170_05025 two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; ATPase-like, ATP-binding domain; SPTR: two-component system sensor histidine kinase; PFAM: Histidine kinase YP_004262370.1 KEGG: fbc:FB2170_05030 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3109) YP_004262371.1 COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: fbc:FB2170_05035 transmembrane protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: Multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family YP_004262372.1 KEGG: fbc:FB2170_05040 hypothetical protein; SPTR: uncharacterized protein YP_004262373.1 COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fbc:FB2170_04780 AcrB/AcrD/AcrF family protein; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; PFAM: AcrB/AcrD/AcrF family YP_004262374.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_04775 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_004262375.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_04770 outer membrane efflux protein, PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein, ; PFAM: Outer membrane efflux protein YP_004262376.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: rbi:RB2501_05585 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, tetR family protein; PFAM: Bacterial regulatory proteins, tetR family YP_004262377.1 COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fjo:Fjoh_1263 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Geranyltranstransferase; SPTR: isoprenyl synthetase; PFAM: Polyprenyl synthetase YP_004262378.1 KEGG: chu:CHU_0500 hypothetical protein; SPTR: TPR domain protein YP_004262379.1 KEGG: fbc:FB2170_04710 hypothetical protein; SPTR: uncharacterized protein; PFAM: Thioredoxin YP_004262380.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_04705 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262381.1 COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022689: IPR007167: IPR022687: IPR001367; KEGG: rbi:RB2501_05555 iron dependent repressor; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; Ferrous iron transporter, FeoA subunit; SPTR: Iron dependent repressor; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_004262382.1 COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: cat:CA2559_02035 zinc ABC transporter, periplasmic zinc-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Zinc ABC transporter, periplasmic zinc-binding protein; PFAM: Periplasmic solute binding protein family YP_004262383.1 COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: cat:CA2559_02040 zinc ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Zinc ABC transporter, ATP-binding protein; PFAM: ABC transporter YP_004262384.1 COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: cat:CA2559_02045 zinc ABC transporter, permease; PFAM: ABC-3; SPTR: uncharacterized protein; PFAM: ABC 3 transport family YP_004262385.1 COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: cat:CA2559_02050 zinc ABC transporter, permease; PFAM: ABC-3; SPTR: uncharacterized protein; PFAM: ABC 3 transport family YP_004262386.1 KEGG: fbc:FB2170_04655 hypothetical protein; SPTR: uncharacterized protein YP_004262387.1 COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_04650 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF423) YP_004262388.1 KEGG: fbc:FB2170_04645 hypothetical protein; SPTR: uncharacterized protein YP_004262389.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: fbc:FB2170_04000 acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; PRIAM: Glutaryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_004262390.1 COGs: COG4123 O-methyltransferase; HAMAP: tRNA (adenine-N(6)-)-methyltransferase; InterPro IPR022882: IPR007848; KEGG: fbc:FB2170_03980 hypothetical protein; PFAM: Methyltransferase small; SPTR: tRNA (adenine-N(6)-)-methyltransferase; PFAM: Methyltransferase small domain YP_004262391.1 COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR015977; KEGG: fjo:Fjoh_0745 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; PRIAM: Nicotinamide phosphoribosyltransferase; SPTR: Nicotinamide phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family YP_004262392.1 COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946: IPR000836; KEGG: fjo:Fjoh_0755 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_004262393.1 COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: chu:CHU_2421 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: uncharacterized protein; PFAM: NUDIX domain YP_004262394.1 COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR011961: IPR007903; KEGG: fbc:FB2170_03965 16S rRNA-processing protein; PFAM: PRC-barrel; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_004262395.1 COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: fbc:FB2170_03960 30S ribosomal protein S16; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_004262396.1 InterPro IPR011971: IPR019052; KEGG: rbi:RB2501_04250 hypothetical protein; PFAM: Domain of unknown function DUF2383; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_004262397.1 COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805: IPR006055: IPR003141: IPR013520: IPR 004013: IPR011708: IPR004365; KEGG: fbc:FB2170_03950 DNA polymerase III alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Exonuclease; Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_004262398.1 InterPro IPR006652; KEGG: fjo:Fjoh_1953 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SPTR: uncharacterized protein; PFAM: Kelch motif YP_004262399.1 KEGG: mru:mru_0963 adhesin-like protein; SPTR: Adhesin-like protein YP_004262400.1 KEGG: ppp:PHYPADRAFT_152794 hypothetical protein; SPTR: Predicted protein YP_004262401.1 KEGG: cat:CA2559_00470 hypothetical protein; SPTR: uncharacterized protein YP_004262402.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: cat:CA2559_00465 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262403.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cat:CA2559_00455 probable oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; PFAM: short chain dehydrogenase YP_004262404.1 KEGG: htu:Htur_3465 hypothetical protein; SPTR: uncharacterized protein YP_004262405.1 KEGG: cha:CHAB381_1536 hemagglutination activity domain-containing protein; SPTR: uncharacterized protein YP_004262406.1 KEGG: mhr:MHR_0314 hypothetical protein; SPTR: uncharacterized protein YP_004262407.1 KEGG: pfh:PFHG_04373 conserved hypothetical protein; SPTR: uncharacterized protein YP_004262408.1 KEGG: ddi:DDB_G0291197 homeodomain containing protein; SPTR: Homeobox protein 3 YP_004262409.1 KEGG: cbl:CLK_0926 thermolysin metallopeptidase; SPTR: Thermolysin metallopeptidase YP_004262410.1 KEGG: zpr:ZPR_2404 hypothetical protein; SPTR: uncharacterized protein YP_004262411.1 KEGG: pyo:PY05768 hypothetical protein; SPTR: 10b antigen YP_004262414.1 KEGG: sin:YN1551_1492 hypothetical protein; SPTR: uncharacterized protein YP_004262415.1 COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003591: IPR001611; KEGG: ter:Tery_3798 small GTP-binding protein; PFAM: Leucine-rich repeat; SPTR: lipoprotein; PFAM: Leucine Rich Repeat YP_004262416.1 KEGG: tva:TVAG_551850 Formin Homology 2 Domain containing protein; SPTR: Formin Homology 2 Domain containing protein YP_004262417.1 KEGG: tva:TVAG_480170 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein YP_004262418.1 KEGG: fjo:Fjoh_1153 hypothetical protein; SPTR: uncharacterized protein YP_004262419.1 KEGG: fjo:Fjoh_1154 hypothetical protein; SPTR: uncharacterized protein YP_004262420.1 KEGG: cca:CCA00600 peptide ABC transporter, periplasmic binding protein, SPTR: uncharacterized protein YP_004262421.1 COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344: IPR000424; KEGG: fbc:FB2170_04360 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_004262422.1 COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641: IPR022967: IPR018974: IPR003029; KEGG: fbc:FB2170_04335 RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; SPTR: RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_004262423.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR008816: IPR006665; KEGG: cat:CA2559_10923 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; SPTR: OmpA family protein; PFAM: OmpA family YP_004262424.1 KEGG: coc:Coch_0281 membrane or secreted protein; SPTR: uncharacterized protein YP_004262425.1 KEGG: rbi:RB2501_05170 hypothetical protein; SPTR: uncharacterized protein YP_004262426.1 COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: fjo:Fjoh_0866 ferroxidase; PFAM: Ferritin/Dps protein; PRIAM: Ferroxidase; SPTR: Ferroxidase; PFAM: Ferritin-like domain YP_004262427.1 COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR014758: IPR004495: IPR015413: IPR002547; KEGG: fbc:FB2170_04330 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; PFAM: tRNA synthetases class I (M); Anticodon-binding domain; tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_004262428.1 KEGG: fbc:FB2170_00630 hypothetical protein; SPTR: uncharacterized protein YP_004262429.1 COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR010869; KEGG: fbc:FB2170_04325 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1501) YP_004262430.1 COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: fbc:FB2170_04320 probable signal peptide protein; PFAM: Protein of unknown function DUF1800; SPTR: Probable signal peptide protein; PFAM: Protein of unknown function (DUF1800) YP_004262431.1 COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: fbc:FB2170_04315 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein FB2170_04315; PFAM: Uncharacterised protein family UPF0102 YP_004262432.1 KEGG: fbc:FB2170_04310 hypothetical protein; SPTR: uncharacterized protein YP_004262433.1 InterPro IPR000866; KEGG: fbc:FB2170_04305 thiol:disulfide interchange protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Thiol:disulfide interchange protein; PFAM: AhpC/TSA family YP_004262434.1 COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR004576: IPR014001: IPR001650: IPR003711: IPR 011545: IPR005118; KEGG: fbc:FB2170_04290 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; Helicase, C-terminal; Transcription-repair-coupling factor domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_004262435.1 KEGG: zpr:ZPR_0173 hypothetical protein; SPTR: uncharacterized protein YP_004262436.1 InterPro IPR019115; KEGG: fbc:FB2170_17216 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging) YP_004262437.1 KEGG: phe:Phep_2294 glycosyl hydrolase family 88; SPTR: Transglutaminase domain protein YP_004262438.1 InterPro IPR019115; KEGG: zpr:ZPR_1720 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200 YP_004262439.1 InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200 YP_004262440.1 InterPro IPR019115; KEGG: zpr:ZPR_1720 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging) YP_004262441.1 InterPro IPR019115; KEGG: fbc:FB2170_17216 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging) YP_004262442.1 InterPro IPR019115; KEGG: fbc:FB2170_17216 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200 YP_004262443.1 KEGG: fbc:FB2170_04285 hypothetical protein; SPTR: uncharacterized protein YP_004262444.1 COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; InterPro IPR000146; KEGG: fbc:FB2170_04280 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase; PFAM: Fructose-1-6-bisphosphatase YP_004262445.1 InterPro IPR000182; KEGG: fbc:FB2170_04275 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004262446.1 COGs: COG0527 Aspartokinase; InterPro IPR001341: IPR001048; KEGG: fbc:FB2170_04270 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase domain; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase YP_004262447.1 COGs: COG3176 hemolysin; InterPro IPR002123; KEGG: fbc:FB2170_04265 hemolysin; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: hemolysin; PFAM: Acyltransferase YP_004262448.1 KEGG: zpr:ZPR_3157 hypothetical protein; SPTR: uncharacterized protein YP_004262449.1 InterPro IPR007829; KEGG: rbi:RB2501_05045 hypothetical protein; SPTR: uncharacterized protein; PFAM: TM2 domain YP_004262450.1 InterPro IPR004360; KEGG: fbc:FB2170_04240 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004262451.1 InterPro IPR014922; KEGG: fbc:FB2170_04235 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DU1801) YP_004262452.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: fbc:FB2170_04230 predicted dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: Predicted dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_004262453.1 COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: fbc:FB2170_04225 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: uncharacterized protein; PFAM: Cupin domain YP_004262454.1 COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: fbc:FB2170_15563 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; SPTR: gamma-glutamyltranspeptidase; TIGRFAM: Gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_004262455.1 KEGG: fbc:FB2170_06065 hypothetical protein; SPTR: uncharacterized protein YP_004262456.1 COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: mlo:mlr6209 histidine decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Histidine decarboxylase; SPTR: Histidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_004262457.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019888: IPR019887; KEGG: lby:Lbys_0864 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: AsnC family transcriptional regulator; PFAM: MarR family; AsnC family YP_004262458.1 COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006669: IPR006668: IPR000644: IPR006667; KEGG: fbc:FB2170_04220 magnesium transporter; PFAM: MgtE magnesium transporter, integral membrane; Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SPTR: Magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE) YP_004262459.1 COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR011530: IPR020598: IPR001737; KEGG: fbc:FB2170_04215 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Dimethyladenosine transferase; TIGRFAM: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_004262460.1 KEGG: fbc:FB2170_04210 hypothetical protein; SPTR: uncharacterized protein YP_004262461.1 InterPro IPR019734: IPR001440; KEGG: fbc:FB2170_04205 tetratricopeptide repeat domain protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat domain protein YP_004262462.1 COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR002317: IPR015866: IPR002314; KEGG: fbc:FB2170_04200 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase YP_004262463.1 InterPro IPR011020: IPR007782; KEGG: fbc:FB2170_04190 gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM; SPTR: Gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase YP_004262464.1 COGs: COG0196 FAD synthase; InterPro IPR002606: IPR015865: IPR015864; KEGG: fbc:FB2170_04185 riboflavin kinase / FAD synthetase; PFAM: Riboflavin kinase; FAD synthetase; PRIAM: FAD synthetase, Riboflavin kinase; SMART: Riboflavin kinase; SPTR: Riboflavin kinase / FAD synthetase; TIGRFAM: Riboflavin kinase/FAD synthetase; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_004262465.1 KEGG: fbc:FB2170_04175 hypothetical protein; SPTR: uncharacterized protein YP_004262466.1 COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: fbc:FB2170_04170 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_004262467.1 COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); HAMAP: Ribosomal protein L25, long-form; InterPro IPR001021: IPR020055; KEGG: fbc:FB2170_04165 ribosomal L25p family stress protein; PFAM: Ribosomal protein L25, short-form; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25, long-form; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_004262468.1 COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946: IPR000836; KEGG: fbc:FB2170_04160 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_004262469.1 KEGG: zpr:ZPR_3108 hypothetical protein; SPTR: uncharacterized protein YP_004262470.1 KEGG: dfe:Dfer_1770 WD40 domain protein beta propeller; SPTR: uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat YP_004262471.1 COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: bvu:BVU_1812 pectin degradation protein; PFAM: Cupin 2, conserved barrel; SPTR: pectin degradation protein; PFAM: Cupin domain YP_004262472.1 KEGG: fbc:FB2170_00215 endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004262473.1 InterPro IPR005123; KEGG: pat:Patl_2633 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 20G-Fe(II) oxygenase superfamily YP_004262474.1 InterPro IPR018958; KEGG: mmi:MMAR_1441 hypothetical protein; PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: uncharacterized protein YP_004262475.1 COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391; KEGG: pmf:P9303_11841 hypothetical protein; PFAM: Vancomycin resistance VanW; SPTR: uncharacterized protein; PFAM: VanW like protein YP_004262476.1 KEGG: dfe:Dfer_1626 hypothetical protein; SPTR: uncharacterized protein YP_004262477.1 KEGG: bth:BT_4352 hypothetical protein; SPTR: uncharacterized protein YP_004262478.1 COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: hne:HNE_1323 TrkH family potassium uptake protein; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: V-type sodium ATP synthase subunit J (Na(+)-translocating ATPase subunit J); PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_004262479.1 KEGG: cbr:CBG13741 C. briggsae CBR-STR-78 protein; SPTR: uncharacterized protein YP_004262480.1 InterPro IPR018958; KEGG: lhk:LHK_01301 hypothetical protein; PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; SMART: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; SPTR: uncharacterized protein YP_004262481.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003018: IPR003661: IPR003594; KEGG: fbc:FB2170_15718 histidine kinase response regulator hybrid protein; PFAM: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; SPTR: Histidine kinase response regulator hybrid protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain YP_004262482.1 InterPro IPR019734: IPR001440; KEGG: str:Sterm_0892 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat YP_004262483.1 KEGG: pat:Patl_0893 hypothetical protein; SPTR: uncharacterized protein YP_004262484.1 InterPro IPR006311: IPR003953; KEGG: pat:Patl_0892 fumarate reductase/succinate dehydrogenase flavoprotein-like; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Fumarate reductase/succinate dehydrogenase flavoprotein-like; PFAM: FAD binding domain YP_004262485.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5424 iduronate-2-sulfatase; PFAM: Sulfatase; PRIAM: Iduronate-2-sulfatase; SPTR: Iduronate-2-sulfatase; PFAM: Sulfatase YP_004262486.1 InterPro IPR000792; KEGG: gfo:GFO_3462 two-component system sensor histidine kinase/response regulator hybrid; SMART: Transcription regulator LuxR, C-terminal; SPTR: MS139, GGDEF family protein; PFAM: Tetratricopeptide repeat YP_004262487.1 InterPro IPR012944; KEGG: bvu:BVU_1153 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; PFAM: SusD family YP_004262488.1 InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1488 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262489.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pat:Patl_0889 sulfatase; PFAM: Sulfatase; PRIAM: N-acetylgalactosamine-4-sulfatase; SPTR: Sulfatase; PFAM: Sulfatase YP_004262490.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5424 iduronate-2-sulfatase; PFAM: Sulfatase; PRIAM: Iduronate-2-sulfatase; SPTR: Iduronate-2-sulfatase; PFAM: Sulfatase YP_004262491.1 COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041: IPR002888; KEGG: sli:Slin_5426 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: Probable oxidoreductase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_004262492.1 COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311: IPR008274; KEGG: bid:Bind_2919 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Aldehyde dehydrogenase (pyrroloquinoline-quinone); SPTR: Twin-arginine translocation pathway signal; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004262493.1 COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: pat:Patl_0910 hypothetical protein; PFAM: Protein of unknown function DUF1680; SPTR: uncharacterized protein; PFAM: glycosyl hydrolase of unknown function (DUF1680) YP_004262494.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pat:Patl_0895 sulfatase; PFAM: Sulfatase; PRIAM: N-acetylgalactosamine-4-sulfatase; SPTR: Sulfatase; PFAM: Sulfatase YP_004262495.1 KEGG: swd:Swoo_4303 hypothetical protein; SPTR: uncharacterized protein YP_004262496.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103: IPR004199; KEGG: pat:Patl_0821 glycoside hydrolase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5; SPTR: Glycoside hydrolase family 2, TIM barrel; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain YP_004262497.1 KEGG: csh:Closa_0992 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3111) YP_004262498.1 COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: sli:Slin_3955 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: KDPG/KHG aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_004262499.1 COGs: COG3734 2-keto-3-deoxy-galactonokinase; InterPro IPR007729; KEGG: dfe:Dfer_1015 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; SPTR: 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_004262500.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: pat:Patl_0896 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004262501.1 COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342: IPR013341; KEGG: sno:Snov_4076 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; PRIAM: Galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Possible L-rhamnonate dehydratase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004262502.1 InterPro IPR010476; KEGG: str:Sterm_3481 hypothetical protein; PFAM: RhaT l-rhamnose-proton symport 2; SPTR: L-rhamnose-proton symport protein; PFAM: L-rhamnose-proton symport protein (RhaT) YP_004262503.1 COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: fbc:FB2170_02050 GntP family permease; PFAM: Gluconate transporter; SPTR: GntP family permease; PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_004262504.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: fbc:FB2170_03340 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262505.1 KEGG: fbc:FB2170_03585 hypothetical protein; SPTR: uncharacterized protein YP_004262506.1 COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: fbc:FB2170_03580 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_004262507.1 COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638: IPR004559: IPR007197: IPR010723; KEGG: fjo:Fjoh_1376 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_004262508.1 KEGG: fbc:FB2170_03570 hypothetical protein; SPTR: uncharacterized protein; PFAM: cyclase YP_004262509.1 KEGG: fbc:FB2170_03555 hypothetical protein; SPTR: uncharacterized protein YP_004262510.1 InterPro IPR013097; KEGG: fbc:FB2170_03550 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain YP_004262511.1 COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: fbc:FB2170_03545 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF419) YP_004262512.1 COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: fbc:FB2170_03535 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR: DNA mismatch repair protein mutS; PFAM: MutS domain V YP_004262513.1 KEGG: fbc:FB2170_03280 hypothetical protein; SPTR: uncharacterized protein YP_004262514.1 COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR005475: IPR011603: IPR001017; KEGG: fbc:FB2170_03275 2-oxoglutarate dehydrogenase, E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_004262515.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006255: IPR000089: IPR004167: IPR001078; KEGG: fbc:FB2170_03270 dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue succinyltransferase; SPTR: Dihydrolipoamide acetyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) YP_004262516.1 COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: cat:CA2559_04385 di-heme cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Di-haem Cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_004262517.1 KEGG: fbc:FB2170_03265 hypothetical protein; SPTR: uncharacterized protein; PFAM: Retroviral aspartyl protease YP_004262518.1 COGs: COG0084 Mg-dependent DNase; InterPro IPR015991: IPR001130; KEGG: fbc:FB2170_03260 Mg-dependent DNase; PFAM: Deoxyribonuclease, TatD-related; SPTR: Mg-dependent DNase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_004262519.1 COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034: IPR006033; KEGG: fbc:FB2170_03255 L-asparaginase I; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SMART: Asparaginase/glutaminase; SPTR: L-asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I YP_004262520.1 COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_03250 biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family YP_004262521.1 KEGG: fbc:FB2170_03245 hypothetical protein; SPTR: uncharacterized protein YP_004262522.1 InterPro IPR003400; KEGG: fbc:FB2170_03240 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR YP_004262523.1 InterPro IPR003400; KEGG: fbc:FB2170_03235 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR YP_004262524.1 KEGG: fbc:FB2170_03230 hypothetical protein; SPTR: uncharacterized protein YP_004262525.1 KEGG: fbc:FB2170_03225 transmembrane protein; SPTR: transmembrane protein YP_004262526.1 COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: rbi:RB2501_03850 RNA polymerase sigma-54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; SPTR: RNA polymerase sigma-54; TIGRFAM: RNA polymerase sigma factor 54; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_004262527.1 COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase, class IIb; InterPro IPR004522: IPR004365: IPR004364; KEGG: fbc:FB2170_03215 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_004262528.1 COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR003392; KEGG: rbi:RB2501_03840 hypothetical protein; PFAM: Patched; SPTR: uncharacterized protein; PFAM: MMPL family YP_004262529.1 KEGG: lcr:LCRIS_01499 sensor protein; SPTR: Sensor protein YP_004262530.1 COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR015998: IPR002661; KEGG: fbc:FB2170_03200 ribosome releasing factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_004262531.1 COGs: COG0528 Uridylate kinase; InterPro IPR015963: IPR001048; KEGG: cat:CA2559_04055 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: Uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_004262532.1 COGs: COG0264 Translation elongation factor Ts; HAMAP: Translation elongation factor EFTs/EF1B; InterPro IPR001816: IPR000449: IPR014039; KEGG: cat:CA2559_04070 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_004262533.1 COGs: COG0052 Ribosomal protein S2; InterPro IPR005706: IPR001865; KEGG: fbc:FB2170_03185 30S ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_004262534.1 COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: fbc:FB2170_03180 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16 YP_004262535.1 COGs: COG0102 Ribosomal protein L13; InterPro IPR005823: IPR005822; KEGG: fbc:FB2170_03175 50S ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_004262536.1 KEGG: fbc:FB2170_03165 membrane associated hydrolase; SPTR: membrane associated hydrolase; PFAM: Domain of unknown function (DUF1083) YP_004262537.1 KEGG: fbc:FB2170_03160 hypothetical protein; SPTR: uncharacterized protein YP_004262538.1 COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR002421: IPR008918: IPR002562: IPR001098: IPR 018320: IPR020046: IPR020047; KEGG: fbc:FB2170_03150 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I YP_004262539.1 COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: fbc:FB2170_03145 asparaginase precursor; PFAM: Peptidase T2, asparaginase 2; PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se; SPTR: Asparaginase; PFAM: Asparaginase YP_004262540.1 COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: fbc:FB2170_03140 copper homeostasis protein; PFAM: CutC; SPTR: Copper homeostasis protein; PFAM: CutC family YP_004262541.1 COGs: COG1408 phosphohydrolase; InterPro IPR006311: IPR004843; KEGG: fbc:FB2170_03135 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; PFAM: Calcineurin-like phosphoesterase YP_004262542.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: fbc:FB2170_03130 thioredoxin; PFAM: Thioredoxin domain; SPTR: thioredoxin; PFAM: Thioredoxin YP_004262543.1 KEGG: fbc:FB2170_03125 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2723) YP_004262544.1 COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: fbc:FB2170_03115 hypothetical protein; PFAM: Cation/H+ exchanger; SPTR: uncharacterized protein; PFAM: Sodium/hydrogen exchanger family YP_004262545.1 HAMAP: Ribosome maturation factor RimP; InterPro IPR003728; KEGG: fbc:FB2170_03110 hypothetical protein; PFAM: Ribosome maturation factor RimP; SPTR: Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779 YP_004262546.1 COGs: COG0195 Transcription elongation factor; InterPro IPR010213: IPR013735; KEGG: fbc:FB2170_03105 transcription elongation factor NusA; PFAM: Transcription factor NusA, N-terminal; SPTR: Transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA YP_004262547.1 COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178: IPR005225: IPR006847: IPR000795: IPR 004161; KEGG: fbc:FB2170_03100 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_004262548.1 InterPro IPR007730; KEGG: fbc:FB2170_03095 translation initiation factor IF-2; PFAM: Sporulation-related domain; SPTR: Translation initiation factor IF-2; PFAM: Sporulation related domain YP_004262549.1 InterPro IPR007730; KEGG: fbc:FB2170_03095 translation initiation factor IF-2; PFAM: Sporulation-related domain; SPTR: Translation initiation factor IF-2; PFAM: Sporulation related domain YP_004262550.1 InterPro IPR003088; KEGG: fbc:FB2170_03090 cytochrome c3; PFAM: Cytochrome c, class I; SPTR: Cytochrome c3; PFAM: Class III cytochrome C family; Cytochrome c YP_004262551.1 COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR001450; KEGG: fbc:FB2170_03085 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: 4Fe-4S binding domain; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004262552.1 COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: fbc:FB2170_03080 molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD YP_004262553.1 KEGG: fbc:FB2170_03075 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3341) YP_004262554.1 InterPro IPR003088; KEGG: fbc:FB2170_03070 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: uncharacterized protein; PFAM: Cytochrome c YP_004262555.1 KEGG: fbc:FB2170_03065 hypothetical protein; SPTR: uncharacterized protein YP_004262556.1 COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR011759: IPR002429; KEGG: fbc:FB2170_03060 probable alternative cytochrome c oxidase polypeptide II transmembrane protein; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain; SPTR: Cytochrome c oxidase subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain YP_004262557.1 COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: fbc:FB2170_03055 probable cytochrome c oxidase polypeptide I (cytochrome bb3 subunit 1) oxidoreductase; PFAM: Cytochrome c oxidase, subunit I; SPTR: Probable cytochrome c oxidase polypeptide i (Cytochrome bb3 subunit 1) oxidoreductase; PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_004262558.1 KEGG: fbc:FB2170_03050 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2807) YP_004262559.1 COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR003593: IPR004605: IPR008824: IPR003959: IPR 008823; KEGG: cat:CA2559_01270 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_004262560.1 KEGG: pyo:PY00739 CCAAT-box DNA binding protein subunit B; SPTR: CCAAT-box DNA binding protein subunit B YP_004262561.1 COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR006638: IPR010722: IPR012726: IPR007197; KEGG: zpr:ZPR_0141 thiamine biosynthesis protein ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; SPTR: Thiamine biosynthesis protein ThiH; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH YP_004262562.1 COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; HAMAP: Thiazole biosynthesis; InterPro IPR008867; KEGG: zpr:ZPR_0140 thiazole synthase; PFAM: Thiazole biosynthesis; SPTR: Thiazole synthase; PFAM: Thiazole biosynthesis protein ThiG YP_004262563.1 COGs: COG0352 Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; InterPro IPR003733; KEGG: zpr:ZPR_0139 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase 2; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_004262564.1 KEGG: zpr:ZPR_0138 thiamine phosphate pyrophosphorylase; SPTR: thiamine phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI YP_004262565.1 COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: zpr:ZPR_0137 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_004262566.1 InterPro IPR010035: IPR003749; KEGG: zpr:ZPR_0136 thiamine biosynthesis protein; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_004262567.1 COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: cat:CA2559_10963 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_004262568.1 COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR013542: IPR001450; KEGG: fbc:FB2170_03035 iron-sulfur cluster-binding protein; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain; SPTR: iron-sulfur cluster-binding protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein YP_004262569.1 COGs: COG0281 Malic enzyme; InterPro IPR012302: IPR012301: IPR002505; KEGG: fbc:FB2170_03030 NADP-dependent malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SMART: Malic enzyme, NAD-binding; SPTR: NADP-dependent malic enzyme; PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase YP_004262570.1 COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Bacterial DNA recombination protein RuvA; InterPro IPR003583: IPR000085: IPR013849: IPR011114; KEGG: fbc:FB2170_03025 Holliday junction DNA helicase motor protein; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_004262571.1 KEGG: fbc:FB2170_03020 hypothetical protein; SPTR: uncharacterized protein YP_004262572.1 COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR002930: IPR017453; KEGG: fbc:FB2170_03015 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_004262573.1 KEGG: fbc:FB2170_03010 hypothetical protein; SPTR: uncharacterized protein YP_004262574.1 InterPro IPR006260; KEGG: fbc:FB2170_03005 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_004262575.1 InterPro IPR006260; KEGG: rbi:RB2501_03600 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_004262576.1 COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); HAMAP: Protohaem IX farnesyltransferase; InterPro IPR006369: IPR000537; KEGG: fbc:FB2170_02995 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_004262577.1 COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: fbc:FB2170_02990 cytochrome o ubiquinol oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome o ubiquinol oxidase subunit III; PFAM: Cytochrome c oxidase subunit III YP_004262578.1 COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; KEGG: fbc:FB2170_02985 cytochrome c oxidase subunit III; SPTR: Cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase subunit III YP_004262579.1 KEGG: rbi:RB2501_03580 hypothetical protein; SPTR: uncharacterized protein YP_004262580.1 KEGG: fbc:FB2170_02975 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004262581.1 COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_02970 YpmQ; PFAM: Copper chaperone SCO1/SenC; SPTR: YpmQ; PFAM: SCO1/SenC YP_004262582.1 COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: fbc:FB2170_02965 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF420) YP_004262583.1 KEGG: fbc:FB2170_02960 hypothetical protein; SPTR: uncharacterized protein YP_004262584.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: rbi:RB2501_03535 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein; PFAM: ABC transporter; TIGRFAM: bacteriocin export ABC transporter, lactococcin 972 group YP_004262585.1 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: fbc:FB2170_02935 ABC transporter, permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter, permease; PFAM: Predicted permease YP_004262586.1 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: fbc:FB2170_02930 ATP-binding component of ABC transporter; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; PFAM: Predicted permease YP_004262587.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_02925 transport/efflux component protein; PFAM: Secretion protein HlyD; SPTR: transport/efflux component protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_004262588.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_02920 outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein YP_004262589.1 COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR022496: IPR000905; KEGG: fbc:FB2170_02915 glycoprotease family exported protein; PFAM: Peptidase M22, glycoprotease; SPTR: Peptidase M22 glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_004262590.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_03500 small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel; Conserved TM helix YP_004262591.1 InterPro IPR009923; KEGG: fbc:FB2170_02910 hypothetical protein; PFAM: Dodecin flavoprotein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1458) YP_004262592.1 COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824: IPR001075; KEGG: fbc:FB2170_02905 NifU related protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SMART: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SPTR: NifU related protein; PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain YP_004262593.1 InterPro IPR019861; KEGG: fbc:FB2170_02900 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004262594.1 InterPro IPR002035; KEGG: fbc:FB2170_02895 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: uncharacterized protein; PFAM: von Willebrand factor type A domain YP_004262595.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR019734: IPR010559; KEGG: fbc:FB2170_02885 histidine kinase; PFAM: Signal transduction histidine kinase, internal region; SMART: Tetratricopeptide repeat; SPTR: Histidine kinase; PFAM: Histidine kinase YP_004262596.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_02880 response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004262597.1 COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: fbc:FB2170_02875 hexapeptide transferase; SPTR: Hexapeptide transferase YP_004262598.1 COGs: COG0331 ACP S-malonyltransferase; InterPro IPR020801: IPR004410: IPR014043; KEGG: fbc:FB2170_02870 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; PRIAM: ACP S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_004262599.1 InterPro IPR001434; KEGG: fbc:FB2170_02865 hypothetical protein; PFAM: Domain of unknown function DUF11; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain YP_004262600.1 InterPro IPR019861; KEGG: rbi:RB2501_03420 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004262601.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: fbc:FB2170_02855 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004262602.1 COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR011904: IPR000873; KEGG: fbc:FB2170_09726 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Acetate--CoA ligase; SPTR: Acetyl-CoA synthetase; TIGRFAM: Acetate-CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_004262603.1 COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: fbc:FB2170_02850 transporter, NRAMP family protein; SPTR: Transporter, NRAMP family protein; PFAM: Natural resistance-associated macrophage protein YP_004262604.1 COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: fbc:FB2170_02845 transport-related membrane protein; PFAM: Domain of unknown function DUF218; SPTR: transport-related membrane protein; PFAM: DUF218 domain YP_004262605.1 COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: fps:FP1003 hypothetical protein; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: uncharacterized protein; PFAM: Peptidase family S41 YP_004262606.1 KEGG: fbc:FB2170_15458 hypothetical protein; SPTR: uncharacterized protein YP_004262607.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019888: IPR019887; KEGG: chu:CHU_3319 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Leucine-responsive regulatory protein; PFAM: MarR family; AsnC family YP_004262608.1 COGs: COG0620 Methionine synthase II (cobalamin-independent); HAMAP: Cobalamin-independent methionine synthase; InterPro IPR006276: IPR013215: IPR002629; KEGG: fjo:Fjoh_1519 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM: Cobalamin-independent methionine synthase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase YP_004262609.1 InterPro IPR010496; KEGG: cpi:Cpin_6281 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080) YP_004262610.1 KEGG: ttu:TERTU_0847 carbohydrate esterase family 2 domain protein; SPTR: Electron transport complex, RnfABCDGE type, D subunit; PFAM: GDSL-like Lipase/Acylhydrolase YP_004262611.1 COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: fjo:Fjoh_1514 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Diaminobutyrate decarboxylase; SPTR: Pyridoxal-dependent decarboxylase; PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_004262612.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: ebi:EbC_03990 permease, MFS family; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; PFAM: Major Facilitator Superfamily YP_004262613.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: zpr:ZPR_1064 transcriptional regulator, AraC family protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262614.1 KEGG: fjo:Fjoh_3915 hypothetical protein; SPTR: uncharacterized protein YP_004262615.1 InterPro IPR020941; KEGG: fjo:Fjoh_4684 hypothetical protein; SPTR: uncharacterized protein; PFAM: Suppressor of fused protein (SUFU) YP_004262616.1 KEGG: cpi:Cpin_4990 hypothetical protein; SPTR: uncharacterized protein YP_004262617.1 KEGG: cpi:Cpin_3111 hypothetical protein; SPTR: uncharacterized protein YP_004262618.1 KEGG: lci:LCK_00593 peptide ABC transporter permease; SPTR: uncharacterized protein YP_004262619.1 SPTR: uncharacterized protein; manually curated YP_004262620.1 KEGG: pml:ATP_00252 isoleucyl-tRNA synthetase; SPTR: uncharacterized protein YP_004262621.1 KEGG: coc:Coch_2162 hypothetical protein; SPTR: uncharacterized protein YP_004262622.1 COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR007696: IPR000432: IPR005748: IPR007695: IPR 007860: IPR007861; KEGG: fbc:FB2170_02830 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_004262623.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_02825 SpoU rRNA methylase; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: SpoU rRNA methylase; PFAM: SpoU rRNA Methylase family YP_004262624.1 COGs: COG1428 Deoxynucleoside kinase; InterPro IPR000550: IPR002624; KEGG: fbc:FB2170_02820 deoxyguanosine kinase/deoxyadenosine kinase subunit; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase; PRIAM:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, Deoxyadenosine kinase; SPTR: Deoxyguanosine kinase/deoxyadenosine kinase subunit; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: Deoxynucleoside kinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_004262625.1 COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: fbc:FB2170_02810 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_004262626.1 KEGG: fbc:FB2170_02805 outer membrane protein; SPTR: outer membrane protein; PFAM: AsmA family YP_004262627.1 KEGG: fbc:FB2170_02800 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2797) YP_004262628.1 InterPro IPR004993; KEGG: fbc:FB2170_02795 auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: auxin-regulated protein; PFAM: GH3 auxin-responsive promoter YP_004262629.1 KEGG: fbc:FB2170_02790 hypothetical protein; SPTR: uncharacterized protein YP_004262630.1 COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR003593: IPR004487: IPR010603: IPR013093: IPR 019489; KEGG: fbc:FB2170_02785 ATP-dependent protease ATP-binding subunit; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATP-binding subunit; TIGRFAM: Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_004262631.1 COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_02780 ATP-dependent Clp protease proteolytic subunit 2; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 1; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_004262632.1 InterPro IPR007165; KEGG: fbc:FB2170_02765 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: uncharacterized protein; PFAM: Membrane protein of unknown function YP_004262633.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fbc:FB2170_02755 hydrolase, alpha/beta fold family, PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta fold family, ; PFAM: alpha/beta hydrolase fold YP_004262634.1 COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: fbc:FB2170_02750 pyridoxal phosphate biosynthetic protein; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_004262635.1 InterPro IPR000644; KEGG: fbc:FB2170_02745 acetoin utilization protein, PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Acetoin utilization protein, ; PFAM: CBS domain YP_004262636.1 COGs: COG0061 sugar kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; InterPro IPR002504; KEGG: fbc:FB2170_02740 inorganic polyphosphate/ATP-NAD kinase; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD kinase YP_004262637.1 KEGG: fbc:FB2170_02735 inorganic polyphosphate/ATP-NAD kinase; SPTR: Inorganic polyphosphate/ATP-NAD kinase YP_004262638.1 COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke; InterPro IPR001441; KEGG: fbc:FB2170_02730 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_004262639.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: fbc:FB2170_02725 outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: outer membrane protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_004262640.1 InterPro IPR005632; KEGG: fbc:FB2170_02720 cationic outer membrane protein precursor; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein; PFAM: Outer membrane protein (OmpH-like) YP_004262641.1 InterPro IPR005632; KEGG: fbc:FB2170_02715 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: uncharacterized protein; PFAM: Outer membrane protein (OmpH-like) YP_004262642.1 COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391: IPR015942; KEGG: fbc:FB2170_17296 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_004262643.1 COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: fbc:FB2170_17291 DfrA; PFAM: Dihydrofolate reductase domain; SPTR: DfrA; PFAM: Dihydrofolate reductase YP_004262644.1 COGs: COG0207 Thymidylate synthase; HAMAP: Thymidylate synthase; InterPro IPR000398; KEGG: fbc:FB2170_17276 thymidylate synthase; PFAM: Thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_004262645.1 COGs: COG1972 Nucleoside permease; InterPro IPR002668: IPR011642: IPR011657; KEGG: fbc:FB2170_17271 nucleoside transporter; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; SPTR: Nucleoside transporter; PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter YP_004262646.1 COGs: COG1259 conserved hypothetical protein; InterPro IPR003729: IPR001943; KEGG: fbc:FB2170_17266 hypothetical protein; PFAM: Domain of unknown function DUF151; UvrB/UvrC protein; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif YP_004262647.1 COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731; KEGG: fbc:FB2170_17261 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_004262648.1 COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: fbc:FB2170_17256 electron transfer flavoprotein (beta subunit); PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein (Beta subunit); PFAM: Electron transfer flavoprotein domain YP_004262649.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: fbc:FB2170_17251 pyruvate dehydrogenase E1 component, beta subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Pyruvate dehydrogenase E1 component, beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_004262650.1 KEGG: fbc:FB2170_17246 hypothetical protein; SPTR: uncharacterized protein YP_004262651.1 COGs: COG0221 Inorganic pyrophosphatase; HAMAP: Inorganic pyrophosphatase; InterPro IPR008162; KEGG: fbc:FB2170_17241 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_004262652.1 COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energised proton pump; InterPro IPR004131; KEGG: cat:CA2559_05940 inorganic H+ pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; PRIAM: Inorganic diphosphatase; SPTR: Inorganic H+ pyrophosphatase; TIGRFAM: Pyrophosphate-energised proton pump; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_004262653.1 COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: fbc:FB2170_17221 deoxynucleoside kinase subfamily, PFAM: Deoxynucleoside kinase; PRIAM: Deoxyadenosine kinase; SPTR: Deoxyguanosine kinase/deoxyadenosine kinase subunit; PFAM: Deoxynucleoside kinase YP_004262654.1 InterPro IPR019115; KEGG: fbc:FB2170_17216 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging) YP_004262655.1 KEGG: fbc:FB2170_17211 hypothetical protein; SPTR: uncharacterized protein YP_004262656.1 COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; InterPro IPR002133: IPR022628: IPR022629: IPR022630; KEGG: fbc:FB2170_17206 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_004262657.1 COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235: IPR000277; KEGG: fbc:FB2170_17201 O-acetyl-L-homoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetyl-L-homoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_004262658.1 COGs: COG0527 Aspartokinase; InterProIPR001341: IPR000073: IPR001048: IPR005106: IPR 001342; KEGG: fbc:FB2170_17196 bifunctional aspartokinase I/homoserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Alpha/beta hydrolase fold-1; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase, Homoserine dehydrogenase; SPTR: Bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: Aspartate kinase domain; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; aspartate kinase YP_004262659.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_17191 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Methionine gamma-lyase; SPTR: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_004262660.1 COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fbc:FB2170_17186 transcriptional regulator, BadM/Rrf2 family protein; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator) YP_004262661.1 InterPro IPR018638; KEGG: fbc:FB2170_17181 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: uncharacterized protein; PFAM: Predicted membrane protein (DUF2061) YP_004262662.1 COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: fbc:FB2170_17176 possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin) YP_004262663.1 COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784: IPR002500; KEGG: fbc:FB2170_17171 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_004262664.1 COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR005225: IPR011779: IPR000795: IPR004161; KEGG: fjo:Fjoh_1503 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 1; TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain YP_004262665.1 COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117: IPR006067: IPR007842; KEGG: fbc:FB2170_17161 probable sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; HEPN; PRIAM: Ferredoxin--nitrite reductase; SPTR: Probable sulfite reductase; PFAM: HEPN domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_004262666.1 COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366: IPR000878; KEGG: fbc:FB2170_17156 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_004262667.1 COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: fbc:FB2170_17151 uroporphyrin-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Sirohaem synthase, N-terminal; TIGRFAM: siroheme synthase, N-terminal domain YP_004262668.1 COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR022890: IPR013027; KEGG: rbi:RB2501_03115 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004262669.1 COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: fbc:FB2170_17141 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase YP_004262670.1 COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822: IPR000489: IPR003759: IPR006158: IPR 004223; KEGG: fbc:FB2170_17131 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Pterin-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12-dependent methionine synthase, activation domain; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain YP_004262671.1 COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620: IPR003171; KEGG: fbc:FB2170_17126 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_004262672.1 InterPro IPR018550; KEGG: fbc:FB2170_17121 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL) YP_004262673.1 KEGG: fbc:FB2170_17116 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2807) YP_004262674.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_17111 FmtA-like protein; PFAM: Beta-lactamase-related; SPTR: FmtA-like protein; PFAM: Beta-lactamase YP_004262675.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR019864: IPR003439; KEGG: zpr:ZPR_3620 gliding motility protein GldA; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA; PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA YP_004262676.1 COGs: COG0077 Prephenate dehydratase; InterPro IPR001086; KEGG: fjo:Fjoh_0517 prephenate dehydratase; PFAM: Prephenate dehydratase; PRIAM: Prephenate dehydratase; SPTR: Prephenate dehydratase; PFAM: Prephenate dehydratase; ACT domain YP_004262677.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_17101 aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: LL-diaminopimelate aminotransferase; SPTR: aminotransferase; PFAM: Aminotransferase class I and II YP_004262678.1 COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: fbc:FB2170_17096 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_004262679.1 COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002701: IPR006218: IPR020822; KEGG: fbc:FB2170_17091 chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SMART: Chorismate mutase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_004262680.1 KEGG: fbc:FB2170_17081 hypothetical protein; SPTR: uncharacterized protein YP_004262681.1 COGs: COG1162 GTPase; HAMAP: Ribosome biogenesis GTPase RsgA, InterPro IPR004881; KEGG: fbc:FB2170_17071 ribosome-associated GTPase; PFAM: Ribosome biogenesis GTPase RsgA, SPTR: ribosome biogenesis GTPase RsgA 2; TIGRFAM: Ribosome biogenesis GTPase RsgA, PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_004262682.1 COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: fbc:FB2170_17066 D-tyrosyl-tRNA deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004262683.1 KEGG: fjo:Fjoh_0511 hypothetical protein; SPTR: GTPase EngB; PFAM: Transglutaminase-like superfamily YP_004262684.1 InterPro IPR002931; KEGG: fjo:Fjoh_0510 hypothetical protein; PFAM: Transglutaminase-like; SPTR: uncharacterized protein; PFAM: Transglutaminase-like superfamily YP_004262685.1 InterPro IPR004518; KEGG: cat:CA2559_07756 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase domain YP_004262686.1 COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; InterPro IPR006264: IPR001986; KEGG: fbc:FB2170_17056 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_004262687.1 COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: Queuosine biosynthesis protein; InterPro IPR003699; KEGG: fbc:FB2170_17051 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_004262688.1 COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383: IPR007197; KEGG: fbc:FB2170_17046 radical SAM enzyme, Cfr family protein; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family YP_004262689.1 KEGG: lbl:LBL_1866 major outer membrane protein (MOMP), LipL32 lipoprotein; SPTR: LipL32; PFAM: Surface lipoprotein of Spirochaetales order YP_004262690.1 COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fbc:FB2170_17041 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase YP_004262691.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: fbc:FB2170_17036 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004262692.1 KEGG: fbc:FB2170_17031 hypothetical protein; SPTR: uncharacterized protein YP_004262693.1 KEGG: fbc:FB2170_17026 hypothetical protein; SPTR: uncharacterized protein YP_004262694.1 KEGG: lic:LIC10474 hypothetical protein; SPTR: uncharacterized protein YP_004262695.1 COGs: COG0358 DNA primase; InterPro IPR002694: IPR006171: IPR006295: IPR013264; KEGG: fbc:FB2170_17016 DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_004262696.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; InterPro IPR001279; KEGG: cat:CA2559_10098 hypothetical protein; PFAM: Beta-lactamase-like; SPTR: uncharacterized protein YP_004262697.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: fbc:FB2170_17011 two component transcriptional regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004262698.1 COGs: COG0171 NAD synthase; InterPro IPR003694: IPR022310; KEGG: fbc:FB2170_17006 NH(3)-dependent NAD synthetase; PFAM: NAD/GMP synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD synthase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase YP_004262699.1 InterPro IPR019853; KEGG: fbc:FB2170_17001 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldB; TIGRFAM: gliding motility-associated lipoprotein GldB YP_004262700.1 InterPro IPR019854; KEGG: fbc:FB2170_16996 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldC; TIGRFAM: gliding motility-associated protein GldC YP_004262701.1 KEGG: cat:CA2559_08646 hypothetical protein; SPTR: uncharacterized protein YP_004262702.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_08651 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain YP_004262703.1 KEGG: ddi:DDB_G0272100 hypothetical protein; SPTR: uncharacterized protein YP_004262704.1 KEGG: fbc:FB2170_16981 hypothetical protein; SPTR: uncharacterized protein YP_004262705.1 COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR019987: IPR002917; KEGG: fbc:FB2170_16976 GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Probable GTP-binding protein engB; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_004262706.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fbc:FB2170_16971 beta-D-galactosidase, PFAM: Alpha/beta hydrolase fold-1; SPTR: Beta-D-galactosidase, ; PFAM: alpha/beta hydrolase fold YP_004262707.1 COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR003444: IPR020603; KEGG: rbi:RB2501_02900 MraZ protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; PFAM: MraZ protein; TIGRFAM: mraZ protein YP_004262708.1 COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: fbc:FB2170_16956 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_004262709.1 KEGG: fbc:FB2170_16951 S-adenosyl-methyltransferase MraW; SPTR: S-adenosyl-methyltransferase MraW YP_004262710.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005543: IPR005311: IPR001460; KEGG: fbc:FB2170_16946 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA; SPTR: Penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain YP_004262711.1 COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR005761: IPR000713: IPR013221: IPR004101; KEGG: fbc:FB2170_16941 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_004262712.1 COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR003524: IPR018480: IPR000715; KEGG: fbc:FB2170_16936 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_004262713.1 COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762: IPR013221: IPR004101; KEGG: fbc:FB2170_16931 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004262714.1 COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_16926 transmembrane rod-shape determining protein; PFAM: Cell cycle protein; SPTR: transmembrane rod-shape determining protein; PFAM: Cell cycle protein YP_004262715.1 COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP: N-acetylglucosaminyltransferase, MurG; InterPro IPR006009: IPR004276: IPR007235; KEGG: fbc:FB2170_16921 N-acetylglucosaminyl transferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_004262716.1 COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758: IPR000713: IPR013221: IPR004101; KEGG: fbc:FB2170_16916 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_004262717.1 KEGG: fbc:FB2170_16911 cell division protein; SPTR: cell division protein YP_004262718.1 COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494: IPR020823; KEGG: fbc:FB2170_16906 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SMART: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_004262719.1 COGs: COG0206 Cell division GTPase; InterPro IPR003008: IPR018316: IPR000158; KEGG: fbc:FB2170_16901 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_004262720.1 COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: cat:CA2559_06495 YqeY family protein; SPTR: YqeY family protein; PFAM: Yqey-like protein YP_004262721.1 KEGG: fno:Fnod_1069 hypothetical protein; SPTR: uncharacterized protein YP_004262722.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: zpr:ZPR_2205 two-component response regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004262723.1 COGs: COG4585 Signal transduction histidine kinase; InterPro IPR019734: IPR003594: IPR001440: IPR011712; KEGG: zpr:ZPR_2206 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: Histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004262724.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: fbc:FB2170_16856 pyridine nucleotide-disulphide oxidoreductase, PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase, ; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004262725.1 COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: fbc:FB2170_16851 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_004262726.1 COGs: COG1278 Cold shock protein; InterPro IPR011129: IPR002059; KEGG: sli:Slin_0668 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Probable CspA5 cold shock protein transcriptional regulator; PFAM: 'Cold-shock' DNA-binding domain YP_004262727.1 COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR006005: IPR013027; KEGG: fbc:FB2170_17451 NADPH-dependent glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADH); SPTR: NADPH-dependent glutamate synthase, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_004262728.1 COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583: IPR006982: IPR002932: IPR002489; KEGG: fbc:FB2170_17446 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_004262729.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: fbc:FB2170_17441 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_004262730.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006096: IPR006097; KEGG: fbc:FB2170_17436 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase (NAD(P)+); PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_004262731.1 COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: rbi:RB2501_09375 probable Na+/H+ antiporter; PFAM: Divalent ion symporter; SPTR: Citrate transporter; PFAM: Citrate transporter YP_004262732.1 COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_17426 biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family YP_004262733.1 COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: fbc:FB2170_17421 tansport related protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: tansport related protein; PFAM: Biopolymer transport protein ExbD/TolR YP_004262734.1 KEGG: fbc:FB2170_17416 hypothetical protein; SPTR: uncharacterized protein YP_004262735.1 COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645: IPR013221; KEGG: fbc:FB2170_17411 folylpolyglutamate synthase; PFAM: Mur ligase, central; PRIAM: Tetrahydrofolate synthase; SPTR: Folylpolyglutamate synthase; TIGRFAM: Folylpolyglutamate synthetase; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_004262736.1 KEGG: coc:Coch_1882 hypothetical protein; SPTR: uncharacterized protein YP_004262737.1 COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR004547: IPR006148: IPR003737; KEGG: fjo:Fjoh_2381 glucosamine-6-phosphate deaminase-like protein; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; N-acetylglucosaminyl phosphatidylinositol deacetylase; PRIAM: Glucosamine-6-phosphate deaminase; SPTR: Glucosamine-6-phosphate isomerase; TIGRFAM: Glucosamine-6-phosphate isomerase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; TIGRFAM: glucosamine-6-phosphate isomerase YP_004262738.1 InterPro IPR006016; KEGG: fbc:FB2170_03675 universal stress protein UspA; PFAM: UspA; SPTR: universal stress protein UspA; PFAM: Universal stress protein family YP_004262739.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808; KEGG: fbc:FB2170_03680 transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulatory protein; PFAM: Cyclic nucleotide-binding domain YP_004262740.1 COGs: COG2217 Cation transport ATPase; InterPro IPR001757: IPR008250: IPR005834; KEGG: fbc:FB2170_03685 cation transport ATPase, E1-E2 family protein; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Cation transport ATPase, E1-E2 family protein; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004262741.1 KEGG: fbc:FB2170_14903 hypothetical protein; SPTR: uncharacterized protein YP_004262742.1 InterPro IPR004714; KEGG: fbc:FB2170_03690 hypothetical protein; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: uncharacterized protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type YP_004262743.1 COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677: IPR003468: IPR000883; KEGG: fbc:FB2170_03695 probable cytochrome oxidase subunit (cbb3-type); PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I YP_004262744.1 KEGG: fbc:FB2170_03700 hypothetical protein; SPTR: uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ YP_004262745.1 InterPro IPR003088; KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain; PFAM: Cytochrome c, class I; SPTR: Cytochrome-c oxidase fixP chain; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_004262746.1 COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: fbc:FB2170_03710 probable iron-sulfur protein; SPTR: Probable iron-sulfur protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_004262747.1 InterPro IPR008620; KEGG: fbc:FB2170_03715 hypothetical protein; PFAM: FixH; SPTR: uncharacterized protein; PFAM: FixH YP_004262748.1 COGs: COG2836 conserved hypothetical protein; KEGG: fbc:FB2170_03720 integral membrane protein; SPTR: Integral membrane protein YP_004262749.1 COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: gfo:GFO_1424 4-hydroxybutyrate coenzyme A transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-hydroxybutyrate coenzyme A transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain YP_004262750.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: phe:Phep_1936 helix-turn-helix-domain containing protein AraC type; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: regulatory protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262751.1 COGs: COG2217 Cation transport ATPase; InterProIPR006403: IPR006416: IPR001757: IPR006121: IPR 008250: IPR005834; KEGG: cat:CA2559_11723 heavy-metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy-metal transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_004262752.1 InterPro IPR006121; KEGG: chu:CHU_1506 cation-transporting ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transporter; PFAM: Heavy-metal-associated domain YP_004262753.1 COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055: IPR006054: IPR013520; KEGG: fjo:Fjoh_2479 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_004262754.1 COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644: IPR000595: IPR005105: IPR018821; KEGG: fjo:Fjoh_2480 CBS domain-containing protein; PFAM: Domain of unknown function DUF294, nucleotidyltransferase ; Cystathionine beta-synthase, core; Cyclic nucleotide-binding domain; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; nucleotidyltransferase DUF294 YP_004262755.1 COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644: IPR022643; KEGG: zpr:ZPR_4206 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal; SPTR: Arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain YP_004262756.1 COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005925: IPR006035; KEGG: cat:CA2559_00520 arginase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase YP_004262757.1 COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: cat:CA2559_00515 hypothetical protein; PFAM: Deoxyhypusine synthase; SPTR: Deoxyhypusine synthase; PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase YP_004262758.1 KEGG: rbi:RB2501_05250 hypothetical protein; SPTR: uncharacterized protein YP_004262759.1 COGs: COG1723 conserved hypothetical protein; InterPro IPR003734; KEGG: cat:CA2559_00505 hypothetical protein; PFAM: Protein of unknown function DUF155; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, YagE family COG1723 YP_004262760.1 COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR005863: IPR000713: IPR013221: IPR004101; KEGG: fbc:FB2170_17396 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-MurNAc-pentapeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_004262761.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR019865: IPR005532; KEGG: fbc:FB2170_17391 lipoprotein, PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, ; TIGRFAM: Gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ YP_004262762.1 COGs: COG0295 Cytidine deaminase; InterPro IPR002125; KEGG: fbc:FB2170_17371 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_004262763.1 COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR017597: IPR001017; KEGG: rbi:RB2501_09640 pyruvate dehydrogenase E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit YP_004262764.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006257: IPR000089: IPR004167: IPR001078; KEGG: fbc:FB2170_17361 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; TIGRFAM: Dihydrolipoamide acetyltransferase, long form; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_004262765.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_17356 peptidase, M28 family protein; PFAM: Peptidase M28; SPTR: peptidase, M28 family protein; PFAM: Peptidase family M28 YP_004262766.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_17351 oxidoreductase, short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase; PFAM: short chain dehydrogenase YP_004262767.1 KEGG: fbc:FB2170_17326 hypothetical protein; SPTR: uncharacterized protein; PFAM: SprT-like family YP_004262768.1 COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: fbc:FB2170_17321 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004262769.1 COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: fbc:FB2170_17316 integral membrane protein; PFAM: Protein of unknown function DUF389; SPTR: integral membrane protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain YP_004262770.1 COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593: IPR003439; KEGG: fbc:FB2170_17311 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004262771.1 COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: fbc:FB2170_17306 hypothetical protein; PFAM: Domain of unknown function DUF140; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_004262772.1 InterPro IPR002591; KEGG: fbc:FB2170_17301 alkaline phosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: alkaline phosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_004262773.1 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_02710 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004262774.1 KEGG: fbc:FB2170_02705 hypothetical protein; SPTR: uncharacterized protein YP_004262775.1 COGs: COG0332 3-oxoacyl-ACP; InterPro IPR013751: IPR013747; KEGG: fbc:FB2170_02700 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-ACP synthase III YP_004262776.1 COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P protein, homodimeric; InterPro IPR003437: IPR020580; KEGG: zpr:ZPR_3910 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating]; TIGRFAM: Glycine cleavage system P protein, homodimeric; PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_004262777.1 KEGG: fbc:FB2170_02690 hypothetical protein; SPTR: uncharacterized protein YP_004262778.1 KEGG: fbc:FB2170_02685 glycine dehydrogenase; SPTR: Glycine dehydrogenase YP_004262779.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: fbc:FB2170_02680 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family YP_004262780.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fbc:FB2170_02675 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: uncharacterized protein; PFAM: Rhodanese-like domain YP_004262781.1 COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099: IPR001509: IPR013549; KEGG: fjo:Fjoh_0443 hypothetical protein; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: Cell-division inhibitor; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777 YP_004262782.1 KEGG: chu:CHU_1870 hypothetical protein; SPTR: uncharacterized protein YP_004262783.1 InterPro IPR013216; KEGG: cpi:Cpin_4429 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: uncharacterized protein; PFAM: Methyltransferase domain YP_004262784.1 KEGG: chu:CHU_1868 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized conserved protein (COG2071) YP_004262785.1 KEGG: chu:CHU_1867 hypothetical protein; SPTR: uncharacterized protein YP_004262786.1 COGs: COG1510 transcriptional regulator protein; InterPro IPR001845; KEGG: fjo:Fjoh_0439 transcriptional regulators-like protein; PFAM: HTH transcriptional regulator, ArsR; SPTR: uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family YP_004262787.1 KEGG: ppp:PHYPADRAFT_116752 hypothetical protein; SPTR: NBS-LRR disease resistance protein homologue YP_004262788.1 KEGG: zpr:ZPR_1409 conserved protein, with weak BamHI domain; SPTR: Conserved protein, with weak BamHI domain YP_004262789.1 KEGG: zpr:ZPR_1410 hypothetical protein; SPTR: uncharacterized protein YP_004262790.1 KEGG: apl:APL_0411 protective surface antigen D15 precursor; SPTR: Protective surface antigen D15 YP_004262791.1 KEGG: fjo:Fjoh_0480 deoxyinosine 3'endonuclease (endonuclease V)-like protein; SPTR: Deoxyinosine 3'endonuclease (Endonuclease V)-like protein; PFAM: Endonuclease V YP_004262792.1 KEGG: lil:LB_039 hypothetical protein; SPTR: uncharacterized protein YP_004262793.1 KEGG: pfh:PFHG_05224 conserved hypothetical protein; SPTR: uncharacterized protein YP_004262794.1 KEGG: cma:Cmaq_1292 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1 YP_004262795.1 KEGG: mev:Metev_2304 S-layer-related duplication domain-containing protein; SPTR: uncharacterized protein YP_004262796.1 COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003591: IPR001611; KEGG: ter:Tery_3798 small GTP-binding protein; PFAM: Leucine-rich repeat; SPTR: uncharacterized protein; PFAM: Leucine Rich Repeat YP_004262797.1 COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949: IPR016048; KEGG: zpr:ZPR_1059 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: uncharacterized protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_004262798.1 KEGG: fps:FP1960 hypothetical protein; SPTR: uncharacterized protein YP_004262799.1 COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: fbc:FB2170_02670 peptidyl-dipeptidase; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: peptidyl-dipeptidase; PFAM: Peptidase family M3 YP_004262800.1 InterPro IPR000595; KEGG: fjo:Fjoh_3790 CRP/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SPTR: transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain YP_004262801.1 InterPro IPR003591: IPR001611; KEGG: lic:LIC11505 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: U-box domain/leucine-rich repeat protein YP_004262802.1 KEGG: mac:MA3214 hypothetical protein; SPTR: Ulilysin; PFAM: Pregnancy-associated plasma protein-A YP_004262803.1 COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: fbc:FB2170_02665 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_004262804.1 COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR005875: IPR003135; KEGG: fbc:FB2170_02660 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_004262805.1 COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; HAMAP: Adenylate kinase; InterPro IPR000850: IPR005904: IPR006259: IPR000836; KEGG: fbc:FB2170_02655 adenylate kinase; PFAM: Adenylate kinase; Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase, Adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; Hypoxanthine phosphoribosyl transferase; PFAM: Phosphoribosyl transferase domain; Adenylate kinase; TIGRFAM: adenylate kinases; hypoxanthine phosphoribosyltransferase YP_004262806.1 COGs: COG0536 GTPase; HAMAP: GTP-binding protein Obg/CgtA; InterPro IPR014100: IPR006169: IPR002917; KEGG: fbc:FB2170_02650 Spo0B-related GTP-binding protein; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain YP_004262807.1 KEGG: fbc:FB2170_02645 hypothetical protein; SPTR: uncharacterized protein YP_004262810.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559: IPR003594; KEGG: zpr:ZPR_4680 DEAD/DEAH box helicase-like protein; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: DEAD/DEAH box helicase-like protein; PFAM: Histidine kinase YP_004262811.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: zpr:ZPR_4679 two-component system regulatory protein; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system regulatory protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004262812.1 COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; HAMAP: Cardiolipin synthase; InterPro IPR022924: IPR001736; KEGG: phe:Phep_1441 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthase; PFAM: Phospholipase D Active site motif YP_004262813.1 COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890; KEGG: fbc:FB2170_02635 hypothetical protein; PFAM: Alpha-2-macroglobulin, N-terminal; SPTR: uncharacterized protein; PFAM: Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region YP_004262814.1 COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713: IPR013221; KEGG: fbc:FB2170_02620 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR:UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl -meso-diaminopimelateligase; PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain YP_004262815.1 KEGG: mru:mru_0407 Na+-dependent transporter SNF family; SPTR: uncharacterized protein YP_004262816.1 COGs: COG0443 Molecular chaperone; InterPro IPR013126; KEGG: fre:Franean1_3632 2-alkenal reductase; PFAM: Heat shock protein 70; SPTR: 2-alkenal reductase; PFAM: Hsp70 protein YP_004262817.1 KEGG: ptm:GSPATT00012700001 hypothetical protein; SPTR: Chromosome undetermined scaffold_35, whole genome shotgun sequence YP_004262818.1 COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: fbc:FB2170_02610 DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: DNA repair protein; TIGRFAM: Uncharacterised protein family UPF0758; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_004262819.1 KEGG: rbi:RB2501_09785 hypothetical protein; SPTR: uncharacterized protein YP_004262820.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR011951: IPR006439; KEGG: fbc:FB2170_02600 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254 YP_004262821.1 KEGG: fbc:FB2170_02595 hypothetical protein; SPTR: uncharacterized protein YP_004262822.1 KEGG: fbc:FB2170_02590 hypothetical protein; SPTR: uncharacterized protein YP_004262823.1 KEGG: fbc:FB2170_02585 hypothetical protein; SPTR: uncharacterized protein YP_004262824.1 COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959: IPR003593; KEGG: fbc:FB2170_02580 AAA family ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA family ATPase; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_004262825.1 InterPro IPR022764; KEGG: fbc:FB2170_02575 transmembrane protein; PFAM: Peptidase S54, rhomboid domain; SPTR: transmembrane protein; PFAM: Rhomboid family YP_004262826.1 COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537: IPR004441; KEGG: fbc:FB2170_02570 tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3 YP_004262827.1 KEGG: fba:FIC_00247 hypothetical protein; SPTR: uncharacterized protein YP_004262828.1 InterPro IPR012910: IPR000531; KEGG: fba:FIC_00248 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262829.1 KEGG: fjo:Fjoh_4499 hypothetical protein; SPTR: RagB/SusD domain protein YP_004262830.1 InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2846 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262831.1 KEGG: pfh:PFHG_02781 conserved hypothetical protein; SPTR: viral A-type inclusion protein YP_004262832.1 KEGG: lby:Lbys_2068 hypothetical protein; SPTR: uncharacterized protein YP_004262833.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: lby:Lbys_2067 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004262834.1 COGs: COG0048 Ribosomal protein S12; InterPro IPR006032: IPR005679; KEGG: fbc:FB2170_02540 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_004262835.1 COGs: COG0049 Ribosomal protein S7; InterPro IPR000235: IPR005717; KEGG: gfo:GFO_2842 30S ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_004262836.1 COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225; KEGG: fbc:FB2170_02530 elongation factor EF-2; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_004262837.1 COGs: COG0051 Ribosomal protein S10; HAMAP: Ribosomal protein S10 subgroup; InterPro IPR005731: IPR001848; KEGG: fbc:FB2170_02525 30S ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_004262838.1 COGs: COG0087 Ribosomal protein L3; InterPro IPR000597: IPR019927; KEGG: fbc:FB2170_02520 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_004262839.1 COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: fbc:FB2170_02515 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family YP_004262840.1 COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: fbc:FB2170_02510 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; PFAM: Ribosomal protein L23 YP_004262841.1 COGs: COG0090 Ribosomal protein L2; InterPro IPR022666: IPR022669: IPR005880; KEGG: fbc:FB2170_02505 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_004262842.1 COGs: COG0185 Ribosomal protein S19; InterPro IPR002222: IPR005732; KEGG: rbi:RB2501_09875 30S ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_004262843.1 COGs: COG0091 Ribosomal protein L22; InterPro IPR001063: IPR005727; KEGG: fbc:FB2170_02495 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_004262844.1 COGs: COG0092 Ribosomal protein S3; InterProIPR008282: IPR004044: IPR001351: IPR005704: IPR 004087; KEGG: fbc:FB2170_02490 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_004262845.1 COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114: IPR016180; KEGG: fbc:FB2170_02485 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_004262846.1 InterPro IPR001854; KEGG: rbi:RB2501_09895 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_004262847.1 COGs: COG0186 Ribosomal protein S17; InterPro IPR000266: IPR019984; KEGG: fbc:FB2170_02475 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_004262848.1 COGs: COG0093 Ribosomal protein L14; InterPro IPR000218: IPR005745; KEGG: fbc:FB2170_02470 50S ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_004262849.1 COGs: COG0198 Ribosomal protein L24; InterPro IPR005824: IPR003256; KEGG: fbc:FB2170_02465 50S ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_004262850.1 COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: rbi:RB2501_09915 50S ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_004262851.1 COGs: COG0199 Ribosomal protein S14; HAMAP: Ribosomal protein S14, bacterial/plastid; InterPro IPR023036: IPR001209; KEGG: fbc:FB2170_02455 ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: Ribosomal protein S14; PFAM: Ribosomal protein S14p/S29e YP_004262852.1 COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: fbc:FB2170_02450 ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; PFAM: Ribosomal protein S8 YP_004262853.1 COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040: IPR019906; KEGG: fbc:FB2170_02445 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_004262854.1 COGs: COG0256 Ribosomal protein L18; InterPro IPR005484: IPR004389; KEGG: fbc:FB2170_02440 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_004262855.1 COGs: COG0098 Ribosomal protein S5; InterPro IPR013810: IPR005324: IPR005712; KEGG: fbc:FB2170_02435 30S ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_004262856.1 InterPro IPR016082: IPR005996; KEGG: fbc:FB2170_02430 ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_004262857.1 COGs: COG0200 Ribosomal protein L15; InterPro IPR005749; KEGG: fbc:FB2170_02425 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_004262858.1 COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: fbc:FB2170_02420 preprotein translocase SecY; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: SecY protein; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_004262859.1 COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR004368: IPR022967: IPR006196; KEGG: fbc:FB2170_02415 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_004262860.1 InterPro IPR000473; KEGG: rbi:RB2501_09965 ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_004262861.1 COGs: COG0099 Ribosomal protein S13; InterPro IPR001892: IPR019980; KEGG: rbi:RB2501_09970 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_004262862.1 COGs: COG0100 Ribosomal protein S11; InterPro IPR001971: IPR019981; KEGG: fbc:FB2170_02400 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_004262863.1 COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR001912: IPR002942: IPR005709; KEGG: fbc:FB2170_02395 30S ribosomal protein S4; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_004262864.1 COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773: IPR011261: IPR011262: IPR011260: IPR 011263; KEGG: fbc:FB2170_02390 DNA-directed RNA polymerase alpha subunit; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_004262865.1 COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: fbc:FB2170_02385 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_004262866.1 COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474: IPR000991: IPR006274; KEGG: fbc:FB2170_02380 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_004262867.1 COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941: IPR020811: IPR020810; KEGG: rbi:RB2501_10005 phosphopyruvate hydratase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_004262868.1 COGs: COG0372 Citrate synthase; InterPro IPR002020: IPR010953; KEGG: rbi:RB2501_10015 citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_004262869.1 COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: fbc:FB2170_02360 DdaH family protein; PFAM: Amidinotransferase; SPTR: DdaH family protein; PFAM: Amidinotransferase YP_004262870.1 COGs: COG4874 Uncharacterized protein containing a pentein-type domain; KEGG: cat:CA2559_05890 hypothetical protein; SPTR: uncharacterized protein YP_004262871.1 COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278: IPR005148: IPR015945: IPR008909; KEGG: fbc:FB2170_02350 arginyl-tRNA synthetase; PFAM: DALR anticodon binding; Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_004262872.1 COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: cat:CA2559_12488 hypothetical protein; PFAM: Protein of unknown function DUF980; SPTR: uncharacterized protein; PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator YP_004262873.1 InterPro IPR012910; KEGG: fbc:FB2170_02330 outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; SPTR: outer membrane protein probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004262874.1 COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fbc:FB2170_02325 hypothetical protein; PFAM: FecR protein; SPTR: uncharacterized protein; PFAM: FecR protein YP_004262875.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_02320 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004262876.1 KEGG: fbc:FB2170_02315 hypothetical protein; SPTR: uncharacterized protein YP_004262877.1 COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822: IPR000897: IPR004125: IPR004780: IPR 003593; KEGG: fbc:FB2170_02305 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_004262878.1 COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672: IPR020630: IPR020631; KEGG: fbc:FB2170_02300 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004262879.1 COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fbc:FB2170_06755 thiosulfate sulfurtransferase SseA, PFAM: Rhodanese-like; PRIAM: 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like; SPTR: Thiosulfate sulfurtransferase SseA, ; PFAM: Rhodanese-like domain YP_004262880.1 COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: zpr:ZPR_3960 DeoR family transcriptional regulator; SPTR: Bacterial regulatory protein, DeoR family; PFAM: HTH domain YP_004262881.1 COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: cpi:Cpin_2865 transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding; SPTR: Transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding domain YP_004262882.1 COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: fbc:FB2170_02280 endo-1,4-beta-xylanase Z precursor; PFAM: esterase; SPTR: Endo-1,4-beta-xylanase Z; PFAM: esterase YP_004262883.1 COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: fbc:FB2170_02240 hypothetical protein; PFAM: Radical SAM; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily YP_004262884.1 COGs: COG0433 ATPase; InterPro IPR008571; KEGG: fbc:FB2170_02245 hypothetical protein; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, SPTR: uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF853) YP_004262885.1 KEGG: fbc:FB2170_02250 hypothetical protein; SPTR: uncharacterized protein YP_004262886.1 InterPro IPR013096; KEGG: fba:FIC_00886 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: uncharacterized protein; PFAM: Cupin domain YP_004262887.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: fbc:FB2170_02260 hydrolase, SPTR: Hydrolase, ; PFAM: lysophospholipase YP_004262888.1 COGs: COG3565 dioxygenase of extradiol dioxygenase family; InterPro IPR004360; KEGG: fbc:FB2170_02265 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_004262889.1 KEGG: fbc:FB2170_02235 hypothetical protein; SPTR: uncharacterized protein YP_004262890.1 InterPro IPR013216; KEGG: fbc:FB2170_02230 methyltransferase; PFAM: Methyltransferase type 11; SPTR: methyltransferase; PFAM: Tellurite resistance protein TehB YP_004262891.1 KEGG: fbc:FB2170_02225 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2059) YP_004262892.1 InterPro IPR005358; KEGG: fbc:FB2170_02220 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153) YP_004262893.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: rbi:RB2501_10207 sterol desaturase-related protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase-related protein; PFAM: Fatty acid hydroxylase superfamily YP_004262894.1 COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: fbc:FB2170_02215 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1343) YP_004262895.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_02210 ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter permease; PFAM: Predicted permease YP_004262896.1 COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: cat:CA2559_00130 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_004262897.1 COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: mba:Mbar_A3469 galactoside-O-acetyltransferase; PRIAM: Galactoside O-acetyltransferase; SPTR: Galactoside O-acetyltransferase; PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats) YP_004262898.1 InterPro IPR008183; KEGG: fbc:FB2170_02195 hypothetical protein; PFAM: Aldose 1-epimerase; SPTR: uncharacterized protein; PFAM: Aldose 1-epimerase YP_004262899.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547: IPR002645: IPR001902; KEGG: fbc:FB2170_02170 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; TIGRFAM: Sulphate anion transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1 YP_004262900.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279: IPR001763; KEGG: fbc:FB2170_02165 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Metallo-beta-lactamase superfamily protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain YP_004262901.1 COGs: COG0738 Fucose permease; InterPro IPR011701: IPR005275; KEGG: fbc:FB2170_03380 L-fucose permease; PFAM: Major facilitator superfamily MFS-1; SPTR: L-fucose permease; TIGRFAM: L-fucose permease; PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease YP_004262902.1 COGs: COG2706 3-carboxymuconate cyclase; KEGG: fbc:FB2170_03880 hypothetical protein; PRIAM: 6-phosphogluconolactonase; SPTR: uncharacterized protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme YP_004262903.1 COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR004558: IPR006638; KEGG: fbc:FB2170_03835 coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_004262904.1 COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_03830 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; PFAM: Universal stress protein family YP_004262905.1 KEGG: rbi:RB2501_08490 hypothetical protein; SPTR: uncharacterized protein YP_004262906.1 KEGG: fbc:FB2170_00375 hypothetical protein; SPTR: uncharacterized protein YP_004262907.1 KEGG: fbc:FB2170_00370 hypothetical protein; SPTR: uncharacterized protein YP_004262908.1 KEGG: cat:CA2559_03395 glutaminyl-tRNA synthetase; SPTR: uncharacterized protein YP_004262909.1 KEGG: fjo:Fjoh_3359 hypothetical protein; SPTR: uncharacterized protein YP_004262910.1 KEGG: pcr:Pcryo_0554 hypothetical protein; SPTR: uncharacterized protein YP_004262911.1 KEGG: dfe:Dfer_0865 hypothetical protein; SPTR: uncharacterized protein YP_004262912.1 KEGG: phe:Phep_2424 hypothetical protein; SPTR: uncharacterized protein YP_004262913.1 KEGG: mmy:MSC_0226 spermidine/putrescine ABC transporter permease/substrate-binding protein; SPTR: ABC transporter, permease YP_004262914.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: zpr:ZPR_3941 cyclic nucleotide binding-regulatory protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding-regulatory protein; PFAM: Cyclic nucleotide-binding domain YP_004262915.1 COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: zpr:ZPR_3940 endoribonuclease; PFAM: Endoribonuclease L-PSP; SPTR: endoribonuclease; PFAM: Endoribonuclease L-PSP YP_004262916.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: pfs:PFLU2242 hypothetical protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: 30S ribosomal protein S1; PFAM: OmpA family YP_004262917.1 KEGG: sli:Slin_3486 hypothetical protein; SPTR: uncharacterized protein; PFAM: MerC mercury resistance protein YP_004262918.1 COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474: IPR020602; KEGG: fps:FP0634 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_004262919.1 KEGG: tet:TTHERM_00024080 ABC transporter family protein; SPTR: ABC transporter family protein YP_004262920.1 KEGG: dya:Dyak_GE15037 GE15037 gene product from transcript GE15037-RA; SPTR: Lipoprotein YP_004262921.1 KEGG: smh:DMIN_01470 ribosome-associated GTPase EngA; SPTR: Lipoprotein YP_004262922.1 KEGG: maq:Maqu_1736 UDP-N-acetylenolpyruvoylglucosamine reductase; SPTR: uncharacterized protein YP_004262923.1 KEGG: fjo:Fjoh_4072 hypothetical protein; SPTR: uncharacterized protein YP_004262924.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_4071 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-linked outer membrane receptor P92; PFAM: TonB-dependent Receptor Plug Domain YP_004262925.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: dfe:Dfer_5347 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004262926.1 KEGG: azc:AZC_3620 hypothetical protein; SPTR: uncharacterized protein YP_004262927.1 InterPro IPR002110; KEGG: rbi:RB2501_09445 hypothetical protein; SPTR: Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein; PFAM: Ankyrin repeat YP_004262928.1 KEGG: coc:Coch_1987 hypothetical protein; SPTR: uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2271) YP_004262929.1 COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterPro IPR005625: IPR008254: IPR001433; KEGG: fjo:Fjoh_4069 flavodoxin/nitric oxide synthase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Flavodoxin/nitric oxide synthase; PepSY-associated TM helix; SPTR: Oxidoreductase, FAD-binding, ; PFAM: Flavodoxin; Oxidoreductase NAD-binding domain YP_004262930.1 KEGG: vfm:VFMJ11_A0757 hypothetical protein; SPTR: uncharacterized protein YP_004262931.1 KEGG: cpv:cgd6_5520 peptidase'insulinase like peptidase'; SPTR: Zinc protease, possible YP_004262932.1 COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR002290; KEGG: cyt:cce_0726 serine/threonine protein kinase; SMART: Serine/threonine-protein kinase domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain YP_004262933.1 KEGG: cyt:cce_0727 hypothetical protein; SPTR: uncharacterized protein YP_004262934.1 InterPro IPR010432; KEGG: amr:AM1_G0015 hypothetical protein; PFAM: RDD; SPTR: uncharacterized protein; PFAM: RDD family YP_004262935.1 KEGG: chu:CHU_0265 hypothetical protein; SPTR: uncharacterized protein YP_004262936.1 COGs: COG4339 conserved hypothetical protein; KEGG: chu:CHU_2810 hypothetical protein; SPTR: uncharacterized protein YP_004262937.1 InterPro IPR007492; KEGG: fjo:Fjoh_0682 response regulator receiver protein; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: uncharacterized protein; PFAM: LytTr DNA-binding domain YP_004262938.1 KEGG: ipo:Ilyop_1260 hypothetical protein; SPTR: uncharacterized protein YP_004262939.1 KEGG: fbc:FB2170_09141 hypothetical protein; SPTR: uncharacterized protein YP_004262940.1 KEGG: mbu:Mbur_0894 hypothetical protein; SPTR: polyprotein YP_004262941.1 KEGG: zpr:ZPR_2189 pyridoxal-phosphate dependent enzyme; SPTR: uncharacterized protein YP_004262942.1 KEGG: pfh:PFHG_02022 conserved hypothetical protein; SPTR: Uncharacterized protein PFB0765w YP_004262943.1 KEGG: ure:UREG_06132 hypothetical protein; SPTR: uncharacterized protein YP_004262944.1 KEGG: ecx:EcHS_A2424 hypothetical protein; SPTR: uncharacterized protein YP_004262945.1 KEGG: fjo:Fjoh_0841 hypothetical protein; SPTR: Hypothetical lipoprotein YP_004262946.1 KEGG: coc:Coch_0429 hypothetical protein; SPTR: uncharacterized protein YP_004262947.1 KEGG: zpr:ZPR_0523 membrane protein; SPTR: Membrane protein YP_004262948.1 KEGG: dsa:Desal_1757 hypothetical protein; SPTR: uncharacterized protein YP_004262949.1 KEGG: tet:TTHERM_00148840 Protein kinase domain containing protein; SPTR: uncharacterized protein YP_004262950.1 KEGG: cpi:Cpin_6510 hypothetical protein; SPTR: uncharacterized protein YP_004262951.1 InterPro IPR011652; KEGG: str:Sterm_2246 MORN variant repeat protein; PFAM: MORN variant; SPTR: MORN repeat protein YP_004262952.1 InterPro IPR007886; KEGG: fbc:FB2170_01970 hypothetical protein; PFAM: Alanine dehydrogenase/PNT, N-terminal; PRIAM: Saccharopine dehydrogenase (NADP(+), L-lysine-forming); SPTR: uncharacterized protein; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain YP_004262953.1 COGs: COG4330 membrane protein; InterPro IPR009793; KEGG: gfo:GFO_2561 hypothetical protein; PFAM: Protein of unknown function DUF1361; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1361) YP_004262954.1 KEGG: fjo:Fjoh_3516 hypothetical protein; SPTR: uncharacterized protein YP_004262955.1 KEGG: gfo:GFO_2557 hypothetical protein; SPTR: uncharacterized protein YP_004262956.1 KEGG: gfo:GFO_2556 hypothetical protein; SPTR: uncharacterized protein YP_004262957.1 InterPro IPR014922; KEGG: rbi:RB2501_10382 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DU1801) YP_004262958.1 InterPro IPR013740; KEGG: zpr:ZPR_3529 AhpC/TSA family protein; PFAM: Redoxin; SPTR: AhpC/TSA family protein; PFAM: AhpC/TSA family YP_004262959.1 KEGG: gfo:GFO_0662 hypothetical protein; SPTR: uncharacterized protein YP_004262960.1 COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218: IPR006269; KEGG: fbc:FB2170_01916 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_004262961.1 COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795: IPR004161: IPR000640: IPR005225: IPR 006298; KEGG: zpr:ZPR_3619 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_004262962.1 KEGG: sru:SRU_0076 hypothetical protein; SPTR: uncharacterized protein YP_004262963.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: rbi:RB2501_10397 ROK family protein; PFAM: ROK; PRIAM: Polyphosphate--glucose phosphotransferase; SPTR: ROK family protein; PFAM: ROK family YP_004262964.1 InterPro IPR000757; KEGG: caa:Caka_0895 Ig family protein; PFAM: Glycoside hydrolase, family 16; SPTR: MS132, beta-agarase; PFAM: Glycosyl hydrolases family 16 YP_004262965.1 KEGG: gfo:GFO_3232 hypothetical protein; SPTR: uncharacterized protein YP_004262966.1 KEGG: tet:TTHERM_01026430 Protein kinase domain containing protein; SPTR: Protein kinase domain containing protein YP_004262967.1 COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153: IPR006037; KEGG: rbi:RB2501_13614 cell volume regulation protein CvrA; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Cell volume regulation protein CvrA; PFAM: TrkA-C domain; Sodium/hydrogen exchanger family YP_004262968.1 KEGG: bac:BamMC406_5979 hypothetical protein; SPTR: uncharacterized protein YP_004262969.1 KEGG: sma:SAV_5188 hypothetical protein; SPTR: uncharacterized protein YP_004262970.1 COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Quaternary ammonium compound-resistance protein SugE; PFAM: Small Multidrug Resistance protein YP_004262971.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_4320 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Long-chain acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily YP_004262972.1 KEGG: caa:Caka_0509 coagulation factor 5/8 type domain protein; SPTR: Coagulation factor 5/8 type domain protein YP_004262973.1 COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: zpr:ZPR_2571 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_004262974.1 KEGG: rms:RMA_0716 hypothetical protein; SPTR: uncharacterized protein YP_004262975.1 COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: cat:CA2559_09106 cobalt-zinc-cadmium resistance protein CzcD; PFAM: Cation efflux protein; SPTR: Cobalt-zinc-cadmium resistance protein czcD; TIGRFAM: Cation efflux protein; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_004262976.1 COGs: COG2884 ATPase involved in cell division; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_01886 cell division ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division ATP-binding protein; PFAM: ABC transporter YP_004262977.1 InterPro IPR001440: IPR019734; KEGG: fbc:FB2170_01881 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: uncharacterized protein YP_004262978.1 KEGG: fbc:FB2170_01876 hypothetical protein; SPTR: uncharacterized protein YP_004262979.1 COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: cat:CA2559_09378 predicted metal-dependent amidohydrolase with the TIM-barrel fold; PFAM: Amidohydrolase 3; SPTR: Predicted metal-dependent amidohydrolase with the TIM-barrel fold; PFAM: Amidohydrolase family YP_004262980.1 KEGG: fbc:FB2170_01816 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2911) YP_004262981.1 COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583: IPR001962: IPR006426; KEGG: fbc:FB2170_01811 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase B; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_004262982.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594: IPR013506: IPR006171: IPR002288: IPR 011557: IPR001241; KEGG: fbc:FB2170_01806 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_004262983.1 KEGG: fbc:FB2170_01801 hypothetical protein; SPTR: uncharacterized protein YP_004262984.1 KEGG: fbc:FB2170_01796 hypothetical protein; SPTR: uncharacterized protein YP_004262985.1 COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR011275: IPR001236: IPR022383; KEGG: fbc:FB2170_01791 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; PRIAM: L-lactate dehydrogenase; SPTR: Malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent YP_004262986.1 COGs: COG0342 Preprotein translocase subunit SecD; InterProIPR022646: IPR022813: IPR005791: IPR022645: IPR 005665; KEGG: fbc:FB2170_01786 protein-export transmembrane SecDF protein; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; SPTR: uncharacterized protein; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; SecF protein; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_004262987.1 COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_01771 anion transport protein (ABC superfamily, ATP-binding protein); PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: anion transport protein (ABC superfamily, ATP-binding protein); PFAM: ABC transporter YP_004262988.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_01766 YkkB; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: YkkB YP_004262989.1 COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: fbc:FB2170_01761 hypothetical protein; PFAM: Protein of unknown function DUF192; SPTR: uncharacterized protein; PFAM: Uncharacterized ACR, COG1430 YP_004262990.1 COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: fbc:FB2170_01756 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_004262991.1 COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: fbc:FB2170_01751 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein ZPR_3787; TIGRFAM: Protein of unknown function DUF37; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_004262992.1 COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803: IPR015273; KEGG: fbc:FB2170_01746 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_004262993.1 COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474: IPR020602; KEGG: fbc:FB2170_01741 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_004262994.1 KEGG: fbc:FB2170_01736 hypothetical protein; SPTR: uncharacterized protein YP_004262995.1 KEGG: fbc:FB2170_01731 GTP cyclohydrolase I; SPTR: GTP cyclohydrolase I YP_004262996.1 InterPro IPR005017; KEGG: fbc:FB2170_01726 hypothetical protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: uncharacterized protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_004262997.1 KEGG: rbi:RB2501_10527 prolyl-tRNA synthetase; SPTR: Prolyl-tRNA synthetase YP_004262998.1 COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; InterPro IPR004499: IPR002314: IPR004154: IPR016061; KEGG: fbc:FB2170_01706 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; PRIAM: Proline--tRNA ligase; SMART: Prolyl-tRNA synthetase, class II, C-terminal; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I YP_004262999.1 HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: rbi:RB2501_10542 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_004263000.1 KEGG: rbi:RB2501_10547 transcription termination factor Rho; SPTR: Transcription termination factor Rho YP_004263001.1 KEGG: fbc:FB2170_01682 hypothetical protein; SPTR: uncharacterized protein YP_004263002.1 COGs: COG1158 Transcription termination factor; InterProIPR011112: IPR011113: IPR000194: IPR004665: IPR 011129: IPR003593; KEGG: fbc:FB2170_01677 transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; Rho termination factor, N-terminal; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_004263003.1 KEGG: rbi:RB2501_10567 hypothetical protein; SPTR: uncharacterized protein YP_004263004.1 KEGG: cne:CNA04430 U2 snRNA binding protein; SPTR: Pre-mRNA-splicing factor RSE1 YP_004263005.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: dfe:Dfer_0769 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: transcriptional regulator; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263006.1 COGs: COG0622 phosphoesterase; InterPro IPR004843; KEGG: fbc:FB2170_01667 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; TIGRFAM: phosphoesterase, MJ0936 family YP_004263007.1 COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406: IPR020097; KEGG: zpr:ZPR_0974 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_004263008.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: fbc:FB2170_01657 ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ATPase; PFAM: ABC transporter transmembrane region; ABC transporter YP_004263009.1 KEGG: rbi:RB2501_10592 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3667) YP_004263010.1 COGs: COG1624 conserved hypothetical protein; InterPro IPR003390: IPR014046; KEGG: fbc:FB2170_01652 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159 YP_004263011.1 COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489: IPR006390; KEGG: fjo:Fjoh_3497 dihydropteroate synthase; PFAM: Pterin-binding; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_004263012.1 InterPro IPR011630; KEGG: fbc:FB2170_01642 hypothetical protein; PFAM: Domain of unknown function DUF1599; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF1599) YP_004263013.1 InterPro IPR011637; KEGG: fbc:FB2170_01637 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: uncharacterized protein; PFAM: DoxX YP_004263014.1 InterPro IPR009589; KEGG: fbc:FB2170_09401 hypothetical protein; PFAM: Protein of unknown function DUF1200; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1200) YP_004263015.1 COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: chu:CHU_2283 hypothetical protein; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding; SPTR: Transcriptional regulator, ; PFAM: Bacterial transcription activator, effector binding domain YP_004263016.1 COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: fbc:FB2170_01632 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_004263017.1 COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR007848; KEGG: fbc:FB2170_01627 ribosomal protein L11 methyltransferase; PFAM: Methyltransferase small; SPTR: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_004263018.1 InterPro IPR003769; KEGG: fbc:FB2170_01622 ribosomal protein L11 methyltransferase; PFAM: Adaptor protein ClpS, core; SPTR: Ribosomal protein L11 methyltransferase; PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_004263019.1 KEGG: fbc:FB2170_01467 beta-hexosaminidase precursor; SPTR: Beta-hexosaminidase; PFAM: Planctomycete cytochrome C YP_004263020.1 InterPro IPR001258: IPR006311; KEGG: fbc:FB2170_01457 hypothetical protein; PFAM: NHL repeat; SPTR: uncharacterized protein YP_004263021.1 InterPro IPR010869: IPR006311; KEGG: fbc:FB2170_01452 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_004263022.1 InterPro IPR011444: IPR022655; KEGG: fbc:FB2170_01447 hypothetical protein; PFAM: Domain of unknown function DUF1553; Domain of unknown function DUF1549; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553) YP_004263023.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_01442 two-component system response regulator protein; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system response regulator protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263024.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fbc:FB2170_01437 two-component system sensor protein, without kinase domain; PFAM: Signal transduction histidine kinase, internal region; SPTR: two-component system sensor protein, without kinase domain; PFAM: Histidine kinase YP_004263025.1 KEGG: zpr:ZPR_4181 carbohydrate-binding family 9-like protein; SPTR: Carbohydrate-binding family 9-like protein; PFAM: Domain of unknown function (DUF1083) YP_004263026.1 COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: zpr:ZPR_4180 hypothetical protein; PFAM: Protein of unknown function DUF187; SPTR: uncharacterized protein; PFAM: Uncharacterised BCR, COG1649 YP_004263027.1 COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882: IPR015883: IPR000421; KEGG: zpr:ZPR_4178 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; Coagulation factor 5/8 type, C-terminal; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylhexosaminidase; PFAM: F5/8 type C domain; Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2 YP_004263028.1 COGs: COG3537 alpha-1 2-mannosidase; InterPro IPR012939: IPR005887; KEGG: zpr:ZPR_4177 glycosyl hydrolase family 92; PFAM: Glycosyl hydrolase 92; SPTR: Glycosyl hydrolase family 92; TIGRFAM: Alpha-1,2-mannosidase, PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase YP_004263029.1 InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_4176 outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004263030.1 KEGG: zpr:ZPR_4175 hypothetical protein; SPTR: uncharacterized protein YP_004263031.1 COGs: COG3537 alpha-1 2-mannosidase; InterPro IPR012939: IPR005887; KEGG: pat:Patl_0120 alpha-1,2-mannosidase; PFAM: Glycosyl hydrolase 92; SPTR: alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase YP_004263032.1 KEGG: pfh:PFHG_00618 conserved hypothetical protein; SPTR: uncharacterized protein YP_004263033.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fps:FP1523 two-component system response regulatory protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_004263034.1 COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: cat:CA2559_03280 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004263035.1 KEGG: fba:FIC_01564 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1083) YP_004263036.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cat:CA2559_10053 TetR transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family YP_004263037.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423: IPR010131; KEGG: cat:CA2559_10058 outer membrane lipoprotein; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_004263038.1 COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR004764; KEGG: zpr:ZPR_0292 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD family RND transport protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_004263039.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_3397 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_004263040.1 KEGG: cat:CA2559_10078 hypothetical protein; SPTR: uncharacterized protein YP_004263041.1 InterPro IPR012944; KEGG: fjo:Fjoh_2432 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; PFAM: SusD family YP_004263042.1 COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: lby:Lbys_0270 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004263043.1 COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110: IPR011123: IPR003661: IPR003594: IPR 001789: IPR000005: IPR018060; KEGG: fjo:Fjoh_3872 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two-component system sensor histidine kinase/response; PFAM: Y_Y_Y domain; Response regulator receiver domain; Two component regulator propeller; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263044.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_4280 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase YP_004263045.1 COGs: COG1609 Transcriptional regulators; InterPro IPR001761: IPR000843; KEGG: fjo:Fjoh_1615 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family YP_004263046.1 COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509: IPR005886; KEGG: fbc:FB2170_03295 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_004263047.1 COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524; KEGG: fjo:Fjoh_1116 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family YP_004263048.1 COGs: COG0153 Galactokinase; InterPro IPR019539: IPR006204: IPR013750: IPR000705; KEGG: nve:NEMVE_v1g6609 hypothetical protein; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: Galactokinase; TIGRFAM: Galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase YP_004263049.1 COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR005849: IPR005850: IPR001937; KEGG: zpr:ZPR_2834 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Galactose-1-phosphate uridylyltransferase; TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_004263050.1 COGs: COG4845 Chloramphenicol O-acetyltransferase; InterPro IPR001707; KEGG: fjo:Fjoh_0863 chloramphenicol acetyltransferase; PFAM: Chloramphenicol acetyltransferase; SPTR: Chloramphenicol acetyltransferase (CAT-III); manually curated; PFAM: Chloramphenicol acetyltransferase YP_004263051.1 COGs: COG1609 Transcriptional regulators; InterPro IPR001761: IPR000843; KEGG: fbc:FB2170_15063 LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: LacI family transcriptional regulator; PFAM: Bacterial regulatory proteins, lacI family; family YP_004263052.1 COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fjo:Fjoh_4261 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase YP_004263053.1 COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: fbc:FB2170_15053 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; PFAM: KDPG/KHG aldolase; SPTR:Keto-hydroxyglutarate-aldolase/keto-deoxy-phos phogluconatealdolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_004263054.1 KEGG: rso:RSc3186 hypothetical protein; SPTR: uncharacterized protein YP_004263055.1 COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: gsu:GSU0763 helicase; SPTR: helicase; PFAM: Viral (Superfamily 1) RNA helicase YP_004263056.1 KEGG: gfo:GFO_0867 hypothetical protein; SPTR: uncharacterized protein YP_004263057.1 KEGG: csh:Closa_0467 histidinol phosphate phosphatase HisJ family; SPTR: Histidinol phosphate phosphatase HisJ family YP_004263058.1 KEGG: pfh:PFHG_01275 hypothetical protein; SPTR: uncharacterized protein YP_004263059.1 KEGG: dha:DEHA2F26026g DEHA2F26026p; SPTR: Peroxisomal biogenesis factor 3 YP_004263060.1 KEGG: cat:CA2559_11608 hypothetical protein; SPTR: uncharacterized protein YP_004263061.1 KEGG: cat:CA2559_11613 hypothetical protein; SPTR: uncharacterized protein YP_004263062.1 KEGG: cat:CA2559_11618 hypothetical protein; SPTR: uncharacterized protein YP_004263063.1 KEGG: cat:CA2559_11623 hypothetical protein; SPTR: uncharacterized protein YP_004263064.1 COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: nmu:Nmul_A2168 hypothetical protein; PFAM: Domain of unknown function DUF1508; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1508) YP_004263065.1 KEGG: zma:100217051 hypothetical protein LOC100217051; SPTR: uncharacterized protein YP_004263066.1 KEGG: reu:Reut_B5735 hypothetical protein; SPTR: uncharacterized protein; PFAM: Fibronectin-binding protein (FBP) YP_004263067.1 KEGG: mtp:Mthe_0893 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1232) YP_004263068.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: nth:Nther_0809 LexA repressor; PFAM: DNA helicase, UvrD/REP type; SPTR: LexA repressor; PFAM: UvrD/REP helicase YP_004263069.1 COGs: COG1533 DNA repair photolyase; InterPro IPR007197: IPR006638; KEGG: ter:Tery_2906 radical SAM family protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Conserved Archaeal protein; PFAM: Radical SAM superfamily YP_004263070.1 InterPro IPR001387; KEGG: lby:Lbys_1062 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Toxin-antitoxin system, antitoxin component, Xre family; PFAM: Helix-turn-helix YP_004263071.1 COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330: IPR001650: IPR014001; KEGG: mgm:Mmc1_1355 helicase domain-containing protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent helicase; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_004263072.1 KEGG: pmr:PMI2479 plasmid-related protein; SPTR: uncharacterized protein YP_004263073.1 COGs: COG2865 transcriptional regulator protein; InterPro IPR007421: IPR001845; KEGG: fps:FP1553 hypothetical protein; PFAM: ATPase, AAA-4; HTH transcriptional regulator, ArsR; SPTR: uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family; Divergent AAA domain YP_004263074.1 COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR011545: IPR001650: IPR018973: IPR014001; KEGG: mgm:Mmc1_1353 DEAD/DEAH box helicase domain-containing protein; PFAM: Protein of unknown function DUF1998; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: RNA helicase; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase YP_004263075.1 COGs: COG0210 Superfamily I DNA and RNA helicase; KEGG: dae:Dtox_1419 UvrD/REP helicase; SPTR: DNA helicase; PFAM: UvrD/REP helicase YP_004263076.1 KEGG: cat:CA2559_11648 hypothetical protein; SPTR: uncharacterized protein YP_004263077.1 KEGG: cat:CA2559_11653 hypothetical protein; SPTR: uncharacterized protein; manually curated YP_004263078.1 KEGG: cat:CA2559_11658 hypothetical protein; SPTR: uncharacterized protein YP_004263079.1 InterPro IPR018534; KEGG: cat:CA2559_11663 regulatory protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: regulatory protein; PFAM: RteC protein YP_004263080.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_2218 transposase; PFAM: Integrase, catalytic core, phage; SPTR: transposase; PFAM: Phage integrase family YP_004263081.1 COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; HAMAP: Adenine phosphoribosyl transferase; InterPro IPR005764: IPR000836; KEGG: fbc:FB2170_01367 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_004263082.1 KEGG: rbi:RB2501_10997 hypothetical protein; SPTR: uncharacterized protein YP_004263083.1 COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837: IPR004481; KEGG: fbc:FB2170_01337 sodium/calcium exchanger; PFAM: Sodium/calcium exchanger membrane region; SPTR: Na+/Ca+ antiporter, CaCA family; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_004263084.1 COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146; KEGG: fbc:FB2170_01327 glutamine synthetase II; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain YP_004263085.1 COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: fbc:FB2170_01322 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; SPTR: Glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal YP_004263086.1 COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095; KEGG: fbc:FB2170_00050 acetyl-CoA carboxylase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_004263087.1 COGs: COG0305 Replicative DNA helicase; InterPro IPR007693: IPR007694: IPR007692: IPR003593; KEGG: fbc:FB2170_00045 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_004263088.1 KEGG: fbc:FB2170_00040 hypothetical protein; SPTR: uncharacterized protein YP_004263089.1 COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200: IPR000150: IPR006379; KEGG: fbc:FB2170_00035 hypothetical protein; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: uncharacterized protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; manually curated; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_004263090.1 COGs: COG3296 conserved hypothetical protein; KEGG: zpr:ZPR_1830 hypothetical protein; SPTR: uncharacterized protein YP_004263092.1 COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: fbc:FB2170_00020 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_004263093.1 HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR001706: IPR021137; KEGG: fbc:FB2170_00015 ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_004263094.1 COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019814: IPR019815: IPR001288; KEGG: fbc:FB2170_00010 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_004263095.1 COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR004095: IPR012947: IPR002314: IPR004154: IPR 002320; KEGG: fbc:FB2170_00005 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_004263096.1 InterPro IPR007139; KEGG: fbc:FB2170_09241 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: uncharacterized protein; PFAM: Domain of Unknown Function (DUF349) YP_004263097.1 COGs: COG0083 Homoserine kinase; HAMAP: Homoserine kinase; InterPro IPR000870: IPR006204: IPR013750; KEGG: fbc:FB2170_15123 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; PRIAM: Homoserine kinase; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_004263098.1 COGs: COG0527 Aspartokinase; InterProIPR001048: IPR002912: IPR005106: IPR001342: IPR 001341; KEGG: fbc:FB2170_15118 aspartokinase/homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase, Homoserine dehydrogenase; SPTR: Aspartokinase/homoserine dehydrogenase; TIGRFAM: Aspartate kinase domain; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase YP_004263099.1 COGs: COG0063 sugar kinase; InterPro IPR004443: IPR000631; KEGG: fbc:FB2170_15108 sugar kinase; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; SPTR: sugar kinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_004263100.1 KEGG: fbc:FB2170_15103 hypothetical protein; SPTR: uncharacterized protein YP_004263101.1 COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176: IPR003959: IPR001943: IPR013093: IPR 019489: IPR003593; KEGG: fbc:FB2170_15098 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif YP_004263102.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205: IPR006691: IPR005743; KEGG: fbc:FB2170_15093 DNA gyrase A subunit; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA gyrase A subunit; TIGRFAM: DNA gyrase, subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_004263103.1 InterPro IPR001440: IPR019734; KEGG: rbi:RB2501_12979 TPR repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein; PFAM: Tetratricopeptide repeat YP_004263104.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: gfo:GFO_1506 NlpC/P60 family protein; PFAM: NLP/P60; SPTR: NlpC/P60 family protein; PFAM: NlpC/P60 family YP_004263105.1 COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR020616: IPR020617: IPR002155; KEGG: fbc:FB2170_15078 probable acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Probable acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004263106.1 COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR011621: IPR006674: IPR006675: IPR003607; KEGG: fbc:FB2170_15073 transmembrane HD family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Metal-dependent phosphohydrolase, 7TM intracellular domain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: transmembrane HD family protein; TIGRFAM: Uncharacterised protein family HDIG; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_004263107.1 COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: gfo:GFO_0974 biotin carboxyl carrier protein of acyl-CoA carboxylase; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein of acyl-CoA carboxylase; PFAM: Biotin-requiring enzyme YP_004263108.1 COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481: IPR005479: IPR005482; KEGG: zpr:ZPR_1998 biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_004263109.1 COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: cat:CA2559_11343 propionlyl-CoA carboxylase; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase beta chain; PFAM: Carboxyl transferase domain YP_004263110.1 COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: gfo:GFO_2132 alpha amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase catalytic region; manually curated; PFAM: Alpha amylase, catalytic domain YP_004263111.1 COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: cat:CA2559_05095 hypothetical protein; PFAM: esterase; SPTR: esterase; PFAM: esterase YP_004263112.1 COGs: COG0366 Glycosidase; InterPro IPR015171: IPR006047: IPR019492: IPR006589; KEGG: gfo:GFO_2133 alpha amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Cyclomaltodextrinase, N-terminal; Cyclo-malto-dextrinase, C-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase, catalytic region; PFAM: Cyclomaltodextrinase, N-terminal; Alpha amylase, catalytic domain; Cyclo-malto-dextrinase C-terminal domain YP_004263113.1 COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196: IPR005195: IPR005194; KEGG: fbc:FB2170_08179 trehalose/maltose hydrolase (phosphorylase); PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: Trehalose/maltose hydrolase (Phosphorylase); PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_004263114.1 COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010972: IPR010976: IPR006402: IPR005834; KEGG: cat:CA2559_05080 predicted phosphatase/phosphohexomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Predicted phosphatase/phosphohexomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase YP_004263115.1 COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: gfo:GFO_2136 major facilitator superfamily permease alpha-glucoside transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Hypothetical transport protein; PFAM: Major Facilitator Superfamily YP_004263116.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: gfo:GFO_2137 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family YP_004263117.1 InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_2822 TonB-dependent receptor Plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263118.1 InterPro IPR012944; KEGG: cpi:Cpin_6167 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004263119.1 KEGG: lby:Lbys_2309 hypothetical protein; SPTR: uncharacterized protein YP_004263120.1 COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193: IPR006047: IPR006589; KEGG: cat:CA2559_05045 alpha-amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha-amylase; PFAM: Alpha amylase, catalytic domain YP_004263121.1 KEGG: rbi:RB2501_09315 hypothetical protein; SPTR: uncharacterized protein YP_004263122.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: fbc:FB2170_16151 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004263123.1 InterPro IPR019861; KEGG: fbc:FB2170_16156 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004263124.1 InterPro IPR003367; KEGG: spl:Spea_0368 cadherin; SPTR: Cadherin YP_004263125.1 COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: fjo:Fjoh_2014 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; PFAM: Aminotransferase class-V YP_004263126.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129: IPR000757; KEGG: sli:Slin_1342 glycoside hydrolase family 16; PFAM: Glycoside hydrolase, family 16; Glycerophosphoryl diester phosphodiesterase; PRIAM: Licheninase; SPTR: Glycoside hydrolase family 16; PFAM: Glycerophosphoryl diester phosphodiesterase family; Glycosyl hydrolases family 16 YP_004263127.1 InterPro IPR012944; KEGG: fbc:FB2170_09221 outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD; SPTR: outer membrane protein, probably involved in nutrient binding; PFAM: SusD family YP_004263128.1 InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_09226 outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263129.1 InterPro IPR011123: IPR013249: IPR000792; KEGG: fjo:Fjoh_2430 periplasmic ligand-binding sensor protein; PFAM: Two component regulator three Y; RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: periplasmic ligand-binding sensor protein; PFAM: Y_Y_Y domain; Bacterial regulatory proteins, luxR family YP_004263130.1 COGs: COG3292 periplasmic ligand-binding sensor domain; InterPro IPR011110: IPR011123: IPR000005: IPR018060; KEGG: fjo:Fjoh_2019 histidine kinase; PFAM: HTH transcriptional regulator, AraC; Two component regulator three Y; Two component regulator propeller; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Histidine kinase; PFAM: Y_Y_Y domain; Two component regulator propeller; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263131.1 InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_3251 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263132.1 InterPro IPR012944; KEGG: cpi:Cpin_0005 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004263133.1 COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: zpr:ZPR_1966 alkaline phosphatase; PFAM: Alkaline phosphatase; PRIAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; PFAM: Alkaline phosphatase YP_004263134.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR014327: IPR007627: IPR013249; KEGG: fjo:Fjoh_2006 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_004263135.1 COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: zpr:ZPR_0224 anti-sigma factor; PFAM: FecR protein; SPTR: anti-sigma factor; PFAM: FecR protein YP_004263136.1 InterPro IPR012910: IPR000531; KEGG: bvu:BVU_2220 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263137.1 KEGG: bvu:BVU_2221 hypothetical protein; SPTR: lipoprotein; PFAM: SusD family YP_004263138.1 InterPro IPR000866; KEGG: cat:CA2559_02625 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: uncharacterized protein; PFAM: Redoxin YP_004263139.1 InterPro IPR000866; KEGG: fjo:Fjoh_2011 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family YP_004263140.1 InterPro IPR000866; KEGG: fjo:Fjoh_2011 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family YP_004263141.1 COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740; KEGG: bvu:BVU_2009 thiol-disulfide oxidoreductase; PFAM: Redoxin; SPTR: Antioxidant, AhpC/TSA family; PFAM: Redoxin YP_004263142.1 KEGG: pmz:HMPREF0659_A5438 ATP synthase F0, A subunit; SPTR: Thiol:disulfide interchange protein dsbD; PFAM: Disulphide bond corrector protein DsbC YP_004263143.1 KEGG: pfh:PFHG_04604 conserved hypothetical protein; SPTR: uncharacterized protein YP_004263144.1 COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740; KEGG: bvu:BVU_2009 thiol-disulfide oxidoreductase; PFAM: Redoxin; SPTR: Thioredoxin family protein; PFAM: Redoxin YP_004263145.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: dra:DR_1403 hydrolase-related protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) protein; PFAM: alpha/beta hydrolase fold YP_004263146.1 KEGG: bpo:BP951000_1615 hypothetical protein; SPTR: O-antigen flippase YP_004263147.1 InterPro IPR012944; KEGG: cpi:Cpin_5202 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004263148.1 InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_4169 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: SusC-like TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263149.1 COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_4170 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; PFAM: FecR protein YP_004263150.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR013249; KEGG: fjo:Fjoh_4171 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF subfamily RNA polymerase sigma-24 subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_004263151.1 InterPro IPR004843; KEGG: fjo:Fjoh_4173 metallophosphoesterase; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase YP_004263152.1 KEGG: cat:CA2559_02585 hypothetical protein; SPTR: uncharacterized protein YP_004263153.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterProIPR001761: IPR003661: IPR003594: IPR001789: IPR 000005: IPR018060; KEGG: gfo:GFO_0006 sugar-binding sensor histidine kinase/response regulator hybrid; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Periplasmic binding protein/LacI transcriptional regulator; Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Sugar-binding sensor histidine kinase/response regulator hybrid; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Bacterial regulatory protein, Fis family; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; family YP_004263154.1 InterPro IPR004993; KEGG: cat:CA2559_12318 hypothetical protein; PFAM: GH3 auxin-responsive promoter; SPTR: auxin-regulated protein; PFAM: GH3 auxin-responsive promoter YP_004263155.1 KEGG: cat:CA2559_09178 hypothetical protein; SPTR: uncharacterized protein YP_004263156.1 COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fbc:FB2170_14418 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; PFAM: Phospholipase D Active site motif YP_004263157.1 COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: sli:Slin_4325 ferritin Dps family protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin Dps family protein; PFAM: Ferritin-like domain YP_004263158.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: fjo:Fjoh_4321 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263159.1 KEGG: chu:CHU_3551 hypothetical protein; SPTR: uncharacterized protein YP_004263161.1 COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: fbc:FB2170_10786 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: UDP-N-acetylglucosamine acyltransferase; PFAM: Integral membrane protein TerC family YP_004263162.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014: IPR013655: IPR003661: IPR003594; KEGG: chu:CHU_3546 sensor protein (histidine protein kinase), acting on ArcA; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box YP_004263163.1 InterPro IPR001789; KEGG: chu:CHU_3545 response regulator for Gln (sensor GlnL) (nitrogen regulator I, NRI); PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain YP_004263164.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: chu:CHU_3544 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Regulatory helix-turn-helix protein, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263165.1 InterPro IPR011971: IPR019052; KEGG: gfo:GFO_3029 hypothetical protein; PFAM: Domain of unknown function DUF2383; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_004263166.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: cat:CA2559_10478 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Succinate-semialdehyde dehydrogenase (NAD(P)(+)); SPTR: NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004263167.1 KEGG: cpi:Cpin_5052 hypothetical protein; SPTR: uncharacterized protein YP_004263168.1 KEGG: rbi:RB2501_14749 hypothetical protein; SPTR: uncharacterized protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_004263169.1 COGs: COG2085 dinucleotide-binding protein; InterPro IPR004455; KEGG: amr:AM1_6147 NADP oxidoreductase, coenzyme F420-dependent; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase, coenzyme f420-dependent; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004263170.1 COGs: COG0628 permease; InterPro IPR002549; KEGG: gfo:GFO_2793 membrane protein, UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF20 YP_004263171.1 COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: chu:CHU_3548 ribonuclease; PFAM: Ribonuclease BN-related; SPTR: Probable ribonuclease; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_004263172.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: dfe:Dfer_1402 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: MS124, transcriptional activator; PFAM: Cupin domain YP_004263173.1 COGs: COG2124 Cytochrome P450; InterPro IPR001128; KEGG: pat:Patl_2305 cytochrome P450; PFAM: Cytochrome P450; PRIAM: Linalool 8-monooxygenase; SPTR: MS125, cytochrome P450; PFAM: Cytochrome P450 YP_004263174.1 InterPro IPR001041; KEGG: pat:Patl_2304 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_004263175.1 COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: pat:Patl_2303 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NAD(+) reductase; SPTR: MS127, ferredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004263176.1 InterPro IPR012307; KEGG: fbc:FB2170_03635 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: uncharacterized protein YP_004263177.1 InterPro IPR022409; KEGG: gfo:GFO_1713 PKD domain-containing protein; SPTR: MS108 YP_004263178.1 InterPro IPR012944; KEGG: bvu:BVU_2228 hypothetical protein; PFAM: RagB/SusD; SPTR: MS107; PFAM: SusD family YP_004263179.1 InterPro IPR012910: IPR000531; KEGG: bvu:BVU_0389 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: MS106, outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004263180.1 InterPro IPR001440: IPR019734; KEGG: sli:Slin_2397 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: MS139, GGDEF family protein YP_004263181.1 KEGG: zpr:ZPR_2090 hypothetical protein; SPTR: uncharacterized protein YP_004263182.1 InterPro IPR011701; KEGG: fbc:FB2170_14638 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily YP_004263183.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: zpr:ZPR_2997 sulfatase-modifying factor; PFAM: Sulphatase-modifying factor; SPTR: uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme YP_004263184.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR005982: IPR013027; KEGG: fbc:FB2170_14413 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin-disulfide reductase; TIGRFAM: Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_004263185.1 InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_4941 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004263186.1 KEGG: dfe:Dfer_4942 hypothetical protein; SPTR: uncharacterized protein YP_004263187.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fbc:FB2170_14403 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II YP_004263188.1 COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: fbc:FB2170_14398 chloromuconate cycloisomerase YkfB1; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase YkfB1; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_004263189.1 KEGG: rbi:RB2501_00761 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2807) YP_004263190.1 COGs: COG1983 stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: fbc:FB2170_14383 hypothetical protein; PFAM: Phage shock domain; SPTR: uncharacterized protein; PFAM: PspC domain YP_004263191.1 COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: zpr:ZPR_2403 PadR-like family transcriptional regulator protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: uncharacterized protein; PFAM: Transcriptional regulator PadR-like family YP_004263192.1 KEGG: fbc:FB2170_14363 hypothetical protein; SPTR: uncharacterized protein YP_004263193.1 COGs: COG2013 conserved hypothetical protein; InterPro IPR002838; KEGG: fbc:FB2170_14358 hypothetical protein; PFAM: Protein of unknown function DUF124; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124; TIGRFAM: conserved hypothetical protein TIGR00266 YP_004263194.1 COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: fbc:FB2170_14348 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family YP_004263195.1 KEGG: fbc:FB2170_14343 hypothetical protein; SPTR: uncharacterized protein YP_004263196.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: fbc:FB2170_14333 transcriptional regulator, LysR family protein; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family protein; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_004263197.1 COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: fjo:Fjoh_4766 ferritin, Dps family protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin, Dps family protein; PFAM: Ferritin-like domain YP_004263198.1 COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: fbc:FB2170_14298 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2141) YP_004263199.1 KEGG: tps:THAPSDRAFT_24017 hypothetical protein; SPTR: uncharacterized protein YP_004263200.1 COGs: COG2808 Transcriptional regulator; InterPro IPR007396; KEGG: fbc:FB2170_14218 probable transcriptional regulator; PFAM: Negative transcriptional regulator; SPTR: Probable transcriptional regulator; PFAM: FMN-binding domain YP_004263201.1 COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_14213 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family YP_004263202.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR000748: IPR002942: IPR006145; KEGG: fbc:FB2170_00535 pseudouridine synthase, Rsu; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_004263203.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fbc:FB2170_14138 hypothetical protein; PFAM: Signal transduction histidine kinase, internal region; SPTR: uncharacterized protein; PFAM: Histidine kinase YP_004263204.1 KEGG: fbc:FB2170_14133 hypothetical protein; SPTR: uncharacterized protein YP_004263205.1 KEGG: rbi:RB2501_00646 hypothetical protein; SPTR: uncharacterized protein YP_004263206.1 KEGG: fbc:FB2170_14123 hypothetical protein; SPTR: uncharacterized protein YP_004263207.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_14118 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263208.1 KEGG: fbc:FB2170_14113 hypothetical protein; SPTR: uncharacterized protein; PFAM: LETM1-like protein YP_004263209.1 KEGG: rbi:RB2501_00631 hypothetical protein; SPTR: uncharacterized protein YP_004263210.1 KEGG: rbi:RB2501_00626 hypothetical protein; SPTR: uncharacterized protein YP_004263211.1 InterPro IPR001440: IPR019734; KEGG: rbi:RB2501_00621 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: uncharacterized protein YP_004263213.1 KEGG: rbi:RB2501_00606 hypothetical protein; SPTR: uncharacterized protein; PFAM: Anti-sigma-K factor rskA YP_004263214.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR007630; KEGG: cat:CA2559_12208 RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004263215.1 COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: fjo:Fjoh_4761 superoxide dismutase, copper/zinc binding; PFAM: Superoxide dismutase, copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]; PFAM: Copper/zinc superoxide dismutase (SODC) YP_004263216.1 InterPro IPR007372; KEGG: fbc:FB2170_14108 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: uncharacterized protein YP_004263217.1 KEGG: fbc:FB2170_14088 hypothetical protein; SPTR: uncharacterized protein; PFAM: BNR/Asp-box repeat YP_004263218.1 InterPro IPR005625; KEGG: cat:CA2559_05150 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: PepSY-associated TM helix family protein YP_004263219.1 COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: zpr:ZPR_2265 hypothetical protein; SPTR: uncharacterized protein YP_004263220.1 COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: zpr:ZPR_2266 magnesium chelatase subunit Chll; SPTR: Magnesium chelatase, subunit ChlI YP_004263221.1 COGs: COG4430 conserved hypothetical protein; KEGG: fbc:FB2170_14073 hypothetical protein; SPTR: uncharacterized protein YP_004263222.1 KEGG: fbc:FB2170_02190 hypothetical protein; SPTR: uncharacterized protein YP_004263223.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: zpr:ZPR_2932 M16 family peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_004263224.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_14013 aminopeptidase M1 family protein; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Aminopeptidase M1 family protein; PFAM: Peptidase family M1 YP_004263225.1 COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: zpr:ZPR_2020 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_004263226.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: cat:CA2559_10643 probable aminopeptidase fused to fibronectin type 3 domain; PFAM: Peptidase M28; SPTR: Peptidase family M28; PFAM: Peptidase family M28 YP_004263227.1 InterPro IPR011701; KEGG: gfo:GFO_2207 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; PFAM: Major Facilitator Superfamily YP_004263228.1 COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337: IPR006379: IPR001830; KEGG: fbc:FB2170_13998 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming), Trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB YP_004263229.1 COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: fbc:FB2170_13993 glycoside hydrolase, family 15; PFAM: Glycoside hydrolase 15-related; SPTR: Glycoside hydrolase, family 15; PFAM: Glycosyl hydrolases family 15 YP_004263230.1 COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: fbc:FB2170_13988 Bdb protein; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Diaminobutyrate decarboxylase; SPTR: Bdb protein; PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_004263231.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: zpr:ZPR_2467 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_004263232.1 COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155: IPR020616: IPR020617; KEGG: fbc:FB2170_13968 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_004263233.1 COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108: IPR001753; KEGG: fbc:FB2170_13963 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase/carnithine racemase fusion; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_004263234.1 InterPro IPR000835; KEGG: fbc:FB2170_13958 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: uncharacterized protein; PFAM: MarR family YP_004263235.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: fbc:FB2170_13943 probable long chain fatty-acid CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Probable long chain fatty-acid CoA ligase; PFAM: AMP-binding enzyme YP_004263236.1 KEGG: zpr:ZPR_1054 hypothetical protein; SPTR: uncharacterized protein YP_004263237.1 KEGG: fbc:FB2170_08854 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF664) YP_004263238.1 KEGG: zpr:ZPR_2886 membrane protein; SPTR: Hypothetical transmembrane protein YP_004263239.1 KEGG: zpr:ZPR_2887 membrane protein; SPTR: uncharacterized protein YP_004263240.1 InterPro IPR013857; KEGG: gfo:GFO_2305 hypothetical protein; PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; SPTR: uncharacterized protein; PFAM: Complex I intermediate-associated protein 30 (CIA30) YP_004263241.1 COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728: IPR010918; KEGG: fbc:FB2170_13928 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_004263242.1 KEGG: rbi:RB2501_05175 hypothetical protein; SPTR: uncharacterized protein YP_004263243.1 COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: fbc:FB2170_13918 sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: sun protein; PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_004263244.1 KEGG: fbc:FB2170_13908 oxidoreductase; SPTR: oxidoreductase; PFAM: BNR/Asp-box repeat YP_004263245.1 KEGG: cat:CA2559_10293 hypothetical protein; SPTR: uncharacterized protein YP_004263246.1 KEGG: fbc:FB2170_13893 hypothetical protein; SPTR: uncharacterized protein YP_004263247.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: fbc:FB2170_13888 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004263248.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: fbc:FB2170_13883 ABC transporter, ATP-binding protein, MsbA family; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MsbA family; PFAM: ABC transporter transmembrane region; ABC transporter YP_004263249.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844: IPR005845: IPR005846; KEGG: fbc:FB2170_13878 phosphoglucomutase phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; SPTR: Phosphoglucomutase phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_004263250.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13873 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004263251.1 KEGG: fbc:FB2170_13868 hypothetical protein; SPTR: uncharacterized protein YP_004263252.1 COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: fbc:FB2170_13863 50S ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_004263253.1 KEGG: fbc:FB2170_13858 hypothetical protein; SPTR: uncharacterized protein YP_004263254.1 COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: fbc:FB2170_15218 phosphoglycerate mutase family domain protein; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; SPTR: Phosphoglycerate mutase family domain protein; PFAM: Phosphoglycerate mutase family YP_004263255.1 COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: rbi:RB2501_12794 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_004263256.1 COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: rbi:RB2501_12799 phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: uncharacterized protein; PFAM: Ppx/GppA phosphatase family YP_004263257.1 COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; InterPro IPR010386; PFAM: tRNA--hydroxylase; PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) YP_004263258.1 COGs: COG3828 conserved hypothetical protein; KEGG: phe:Phep_0731 Crp/FNR family transcriptional regulator; SPTR: Crp/FNR family transcriptional regulator; PFAM: Trehalose utilisation YP_004263259.1 KEGG: ppy:PPE_03088 polygalacturonase (pectinase) (PGL); SPTR: Iota-carrageenase A2 YP_004263260.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763: IPR003959: IPR003593; KEGG: fbc:FB2170_15203 DNA polymerase III subunit gamma/tau; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III, delta subunit YP_004263261.1 COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398; KEGG: fbc:FB2170_15193 methyltransferase; PFAM: RNA methyltransferase, RsmD; SPTR: methyltransferase; TIGRFAM: RNA methyltransferase, RsmD; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_004263262.1 KEGG: fbc:FB2170_15188 hypothetical protein; SPTR: uncharacterized protein YP_004263263.1 KEGG: fbc:FB2170_15183 hypothetical protein; SPTR: uncharacterized protein YP_004263264.1 COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: fbc:FB2170_15178 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; SPTR: ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member YP_004263265.1 KEGG: fbc:FB2170_15173 hypothetical protein; SPTR: uncharacterized protein YP_004263266.1 COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528: IPR003329; KEGG: fbc:FB2170_15168 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_004263267.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: fbc:FB2170_15163 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: uncharacterized protein; PFAM: haloacid dehalogenase-like hydrolase YP_004263268.1 COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: fbc:FB2170_15158 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; SPTR: Iron-containing alcohol dehydrogenase; manually curated; PFAM: Iron-containing alcohol dehydrogenase YP_004263269.1 COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938; KEGG: hau:Haur_2339 monooxygenase FAD-binding; PFAM: Monooxygenase, FAD-binding; PRIAM: Zeaxanthin epoxidase; SPTR: Possible monooxygenase; PFAM: FAD binding domain YP_004263270.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_15153 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_004263271.1 COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: fbc:FB2170_15148 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein FB2170_15148; TIGRFAM: Protein of unknown function DUF28; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_004263272.1 KEGG: fjo:Fjoh_2013 cytochrome c biogenesis protein, transmembrane region; SPTR: Cytochrome c biogenesis protein, transmembrane region; PFAM: Disulphide bond corrector protein DsbC YP_004263273.1 COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: fjo:Fjoh_2013 cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane domain; PRIAM: Protein-disulfide reductase; SPTR: thiol:disulfide interchange protein DsbD; PFAM: Cytochrome C biogenesis protein transmembrane region YP_004263274.1 InterPro IPR013740; KEGG: cat:CA2559_02625 hypothetical protein; PFAM: Redoxin; SPTR: uncharacterized protein; PFAM: Redoxin YP_004263275.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: bvu:BVU_3629 zinc protease; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: uncharacterized protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_004263276.1 COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: fbc:FB2170_14768 GMC oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Oxidoreductase, GMC family protein; PFAM: GMC oxidoreductase YP_004263277.1 KEGG: fbc:FB2170_14763 Tat (twin-arginine translocation) pathway signal sequence domain protein; SPTR: uncharacterized protein YP_004263278.1 COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755; KEGG: fbc:FB2170_14738 probable peptidase; PFAM: Peptidase M15D, VanX D-ala-D-ala dipeptidase; SPTR: Probable peptidase; PFAM: D-ala-D-ala dipeptidase YP_004263279.1 KEGG: fbc:FB2170_09831 hypothetical protein; SPTR: uncharacterized protein YP_004263280.1 COGs: COG0628 permease; InterPro IPR002549; KEGG: fbc:FB2170_09836 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF20 YP_004263281.1 KEGG: fbc:FB2170_09841 hypothetical protein; SPTR: uncharacterized protein YP_004263282.1 COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: fbc:FB2170_09846 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_004263283.1 COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; InterPro IPR022450: IPR017861: IPR000905; KEGG: fbc:FB2170_09856 glycoprotease; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; PFAM: Glycoprotease family; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_004263284.1 InterPro IPR007452; KEGG: fbc:FB2170_09861 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: uncharacterized protein; PFAM: Family of unknown function (DUF490) YP_004263285.1 COGs: COG0205 6-phosphofructokinase; HAMAP: Phosphofructokinase; InterPro IPR012828: IPR022953: IPR000023; KEGG: fbc:FB2170_09866 6-phosphofructokinase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_004263286.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424: IPR020828: IPR020829; KEGG: fbc:FB2170_09871 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_004263287.1 COGs: COG2971 N-acetylglucosamine kinase; KEGG: fbc:FB2170_09876 hypothetical protein; SPTR: uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_004263288.1 COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006056: IPR006175; KEGG: rbi:RB2501_13249 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: uncharacterized protein; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP YP_004263289.1 COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: fbc:FB2170_09886 hypothetical protein; SPTR: uncharacterized protein YP_004263290.1 COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: rbi:RB2501_13259 N-acetylmuramoyl-L-alanine amidase AmiA; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase amiA; PFAM: N-acetylmuramoyl-L-alanine amidase YP_004263291.1 COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fbc:FB2170_09896 hypothetical protein; PFAM: Mammalian cell entry-related; SPTR: uncharacterized protein; PFAM: mce related protein YP_004263292.1 COGs: COG0247 Fe-S oxidoreductase; KEGG: fbc:FB2170_09901 hypothetical protein; SPTR: uncharacterized protein YP_004263293.1 COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: fbc:FB2170_09906 iron-sulfur-binding reductase; PFAM: Cysteine-rich domain; SPTR: iron-sulfur-binding reductase; PFAM: Cysteine-rich domain YP_004263294.1 KEGG: zpr:ZPR_2738 hypothetical protein; SPTR: uncharacterized protein YP_004263295.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR001466; KEGG: fbc:FB2170_09916 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylglucosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase YP_004263296.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09921 glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1 YP_004263297.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_09931 outer membrane protein, OmpA/MotB family; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein, OmpA/MotB family; PFAM: OmpA family YP_004263298.1 COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: fps:FP1411 sugar O-acetyltransferase precursor; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family YP_004263299.1 KEGG: nde:NIDE0879 hypothetical protein; SPTR: uncharacterized protein YP_004263300.1 COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR020019: IPR001451; KEGG: mau:Micau_2124 methicillin resistance protein; SPTR: uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD; PFAM: Protein of unknown function, DUF482; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_004263301.1 COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: coc:Coch_0716 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: UDP-galactose phosphate transferase; PFAM: Bacterial sugar transferase YP_004263302.1 KEGG: mmq:MmarC5_0505 hypothetical protein; SPTR: uncharacterized protein YP_004263303.1 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR003806; KEGG: tra:Trad_0103 protein of unknown function DUF201; PFAM: ATP-grasp fold, DUF201-type; SPTR: uncharacterized protein; PFAM: ATP-grasp domain YP_004263304.1 COGs: COG1541 Coenzyme F390 synthetase; KEGG: nth:Nther_2526 coenzyme F390 synthetase-like protein; SPTR: Coenzyme F390 synthetase-like protein YP_004263305.1 KEGG: mst:Msp_1465 asn/thr-rich large protein family protein; SPTR: Member of asn/thr-rich large protein family YP_004263306.1 InterPro IPR002509; KEGG: chu:CHU_1240 bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein; PFAM: Polysaccharide deacetylase; SPTR: CHU large protein; candidate bifunctional xylanase/esterase; CBM9 module, Glycoside Hydrolase Family 8 protein and Carbohydrate Esterase Family 4 protein; PFAM: Polysaccharide deacetylase YP_004263307.1 COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR001509; KEGG: rbi:RB2501_06715 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-mannose 4,6-dehydratase; SPTR: GDP-D-mannose dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_004263308.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fph:Fphi_1249 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-L-fucose synthase; SPTR: GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase; PFAM: NAD dependent epimerase/dehydratase family YP_004263309.1 COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: cch:Cag_0665 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Probable polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein YP_004263310.1 COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: fps:FP1411 sugar O-acetyltransferase precursor; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetylation protein; PFAM: MBOAT family YP_004263311.1 KEGG: cjr:CJE0590 hypothetical protein; SPTR: uncharacterized protein YP_004263312.1 KEGG: ddf:DEFDS_0381 hypothetical protein; SPTR: uncharacterized protein YP_004263313.1 COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426: IPR000583: IPR001962; KEGG: mpt:Mpe_A2724 asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthase; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferases class-II; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_004263314.1 COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: chu:CHU_2756 hexapeptide repeat-containing protein acetyltransferase; SPTR: Acetyltransferase with multiple hexapeptide repeats; PFAM: Bacterial transferase hexapeptide (three repeats) YP_004263315.1 KEGG: bpb:bpr_I0439 polysaccharide deacetylase Est4B; SPTR: uncharacterized protein; PFAM: Glycosyl transferase family 2 YP_004263316.1 COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: bfr:BF2786 acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Group 2 family glycosyl transferase; PFAM: Glycosyl transferase family 2 YP_004263317.1 COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: coc:Coch_0699 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004263318.1 COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: cat:CA2559_13093 UDP-ManNAc dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-ManNAc dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004263319.1 InterPro IPR001296; KEGG: bfr:BF1101 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: glycosyltransferase; PFAM: Glycosyl transferases group 1 YP_004263320.1 COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: pph:Ppha_0561 acetyltransferase; SPTR: acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats) YP_004263321.1 COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869: IPR013692; KEGG: fps:FP1288 UDP-L-FucpNAc biosynthesis protein FnlA; PFAM: Polysaccharide biosynthesis protein CapD-like; Polysaccharide biosynthesis C-terminal; PRIAM: UDP-glucose 4-epimerase; SPTR: FnlA protein involved in UDP-L-FucpNAc biosynthesis (A nucleotide sugar for antigen-O biosynthesis); PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal YP_004263322.1 KEGG: fps:FP1287 sugar epimerase; SPTR: sugar epimerase; PFAM: WxcM-like, C-terminal YP_004263323.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fps:FP1286 UDP-L-FucpNAc biosynthesis protein FnlB; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: NAD dependent epimerase/dehydratase family; WxcM-like, C-terminal YP_004263324.1 COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: fps:FP1285 UDP-L-FucpNAc biosynthesis protein FnlC; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004263325.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfr:BF1109 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; PFAM: Glycosyl transferases group 1 YP_004263326.1 COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: fbc:FB2170_10011 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004263327.1 COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: nis:NIS_0741 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_004263328.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_10016 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family YP_004263329.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_10031 DegT/DnrJ/EryC1/StrS family aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS family aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_004263330.1 COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: rbi:RB2501_13474 capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: capsular polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein YP_004263331.1 COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: rbi:RB2501_13479 polysaccharide export protein, BexD/CtrA/VexA family protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein, BexD/CtrA/VexA family protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain YP_004263332.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rbi:RB2501_13484 tyrosine-protein kinase; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_004263333.1 COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013; KEGG: fbc:FB2170_10121 capsular polysaccharide biosynthesis protein, PFAM: PHP, C-terminal; SPTR: Capsular polysaccharide biosynthesis protein YP_004263334.1 COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987: IPR013988: IPR013991; KEGG: fjo:Fjoh_2615 PhnA protein-like protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SMART: PhnA protein N-terminal, proteobacterial; SPTR: PhnA protein-like protein; PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_004263335.1 COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; HAMAP: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; InterPro IPR000682; KEGG: zpr:ZPR_3227 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004263336.1 COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: fbc:FB2170_13286 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_004263337.1 KEGG: fbc:FB2170_13281 hypothetical protein; SPTR: uncharacterized protein YP_004263338.1 InterPro IPR013078; KEGG: fbc:FB2170_13276 hypothetical protein; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: uncharacterized protein; PFAM: Phosphoglycerate mutase family YP_004263339.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: fbc:FB2170_13266 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family YP_004263340.1 COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730: IPR004176: IPR003959: IPR013093: IPR 019489: IPR003593; KEGG: fbc:FB2170_13261 heat shock ClpB protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: heat shock ClpB protein; TIGRFAM: Chaperonin ClpB; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_004263341.1 KEGG: fbc:FB2170_13256 hypothetical cytosolic protein; SPTR: Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF2847) YP_004263342.1 KEGG: fbc:FB2170_13251 hypothetical protein; SPTR: uncharacterized protein YP_004263343.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR005959: IPR015377: IPR002529; KEGG: rbi:RB2501_15884 fumarylacetoacetase; PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like; PRIAM: Fumarylacetoacetase; SPTR: Fumarylacetoacetase; TIGRFAM: Fumarylacetoacetase; PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase YP_004263344.1 COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: fbc:FB2170_13241 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase YP_004263345.1 KEGG: fbc:FB2170_13236 serine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase YP_004263346.1 InterPro IPR001789; KEGG: rbi:RB2501_15869 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain YP_004263347.1 COGs: COG4585 Signal transduction histidine kinase; InterPro IPR001440: IPR011712: IPR003594: IPR019734; KEGG: fbc:FB2170_13226 transmembrane protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: transmembrane protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat YP_004263348.1 KEGG: bta:282474 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1; SPTR: Sodium/potassium/calcium exchanger 1 YP_004263349.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_13216 LytTr DNA-binding response regulator; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: LytTr DNA-binding response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263350.1 COGs: COG0824 thioesterase; KEGG: fbc:FB2170_13196 hypothetical protein; SPTR: uncharacterized protein; PFAM: Acyl-ACP thioesterase YP_004263351.1 COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: fbc:FB2170_13191 glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; SPTR: Glutamine cyclotransferase; PFAM: Glutamine cyclotransferase YP_004263352.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_13186 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-ACP reductase; SPTR: oxidoreductase; PFAM: short chain dehydrogenase YP_004263353.1 COGs: COG0176 Transaldolase; HAMAP: Transaldolase 3B, InterPro IPR004731: IPR022999: IPR001585; KEGG: fbc:FB2170_13181 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase 3A/3B; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_004263354.1 KEGG: fbc:FB2170_13176 transaldolase; SPTR: Transaldolase YP_004263355.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: fbc:FB2170_13171 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter YP_004263356.1 COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_13161 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: uncharacterized protein; PFAM: Fasciclin domain YP_004263357.1 COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR004532: IPR002547: IPR005146: IPR005147: IPR 005121; KEGG: fbc:FB2170_13156 phenylalanyl-tRNA synthetase beta subunit; PFAM: B3/B4 tRNA-binding domain; tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SMART: B3/B4 tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_004263358.1 InterPro IPR013740; KEGG: fbc:FB2170_13151 phenylalanyl-tRNA synthetase beta subunit; PFAM: Redoxin; SPTR: Phenylalanyl-tRNA synthetase beta subunit; PFAM: Redoxin YP_004263359.1 COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429: IPR001804; KEGG: rbi:RB2501_15804 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_004263360.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fbc:FB2170_13141 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; PRIAM: 2-isopropylmalate synthase; SPTR: 2-isopropylmalate synthase; PFAM: HMGL-like YP_004263361.1 KEGG: fbc:FB2170_13136 hypothetical protein; SPTR: uncharacterized protein YP_004263362.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_13121 ribosomal large subunit pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: ribosomal large subunit pseudouridine synthase; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_004263363.1 COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: cat:CA2559_10683 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004263364.1 KEGG: fbc:FB2170_13106 hypothetical protein; SPTR: uncharacterized protein YP_004263365.1 KEGG: nve:NEMVE_v1g198360 hypothetical protein; SPTR: uncharacterized protein YP_004263366.1 COGs: COG2936 acyl esterase; InterPro IPR000383: IPR013736; KEGG: fbc:FB2170_10211 x-prolyl-dipeptidyl aminopeptidase; PRIAM: Xaa-Pro dipeptidyl-peptidase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: X-prolyl-dipeptidyl aminopeptidase; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family) YP_004263367.1 COGs: COG1760 L-serine deaminase; InterPro IPR004644: IPR005131: IPR005130; KEGG: fbc:FB2170_12951 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine dehydratase, iron-sulfur-dependent, alpha subunit YP_004263368.1 COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725: IPR013126; KEGG: fbc:FB2170_12941 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_004263369.1 KEGG: fbc:FB2170_12931 hypothetical protein; SPTR: uncharacterized protein YP_004263370.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_12926 amino-acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004263371.1 KEGG: fbc:FB2170_12921 esterase/lipase, SPTR: Esterase/lipase, ; PFAM: Phospholipase/Carboxylesterase YP_004263372.1 COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736: IPR006683; KEGG: fbc:FB2170_12916 hypothetical protein; PFAM: Thioesterase superfamily; SPTR: uncharacterized protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_004263373.1 COGs: COG1169 Isochorismate synthase; InterPro IPR015890; KEGG: fbc:FB2170_12911 isochorismate synthase EntC; PFAM: Chorismate binding, C-terminal; SPTR: Isochorismate synthase entC; PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_004263374.1 COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; InterPro IPR004433: IPR012001; KEGG: fbc:FB2170_12906 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; PRIAM:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex ene-1-carboxylic-acidsynthase; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; TIGRFAM: Menaquinone biosynthesis protein MenD; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase YP_004263375.1 KEGG: fbc:FB2170_12901 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2853) YP_004263376.1 COGs: COG2996 conserved hypothetical protein; KEGG: fbc:FB2170_12896 hypothetical protein; SPTR: uncharacterized protein YP_004263377.1 KEGG: fbc:FB2170_12891 hypothetical protein; SPTR: uncharacterized protein YP_004263378.1 COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR004657: IPR000537; KEGG: fbc:FB2170_12886 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004263379.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fbc:FB2170_12881 response regulator receiver signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Response regulator receiver signal transduction histidine kinase; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263380.1 COGs: COG3920 Signal transduction histidine kinase; InterPro IPR011495: IPR003594; KEGG: fbc:FB2170_12866 two-component hybrid sensor and regulator; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component hybrid sensor and regulator; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004263381.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; HAMAP: Uncharacterised protein family UPF0173, metal-dependent hydrolase; InterPro IPR022877: IPR001279; KEGG: fbc:FB2170_12861 metal-dependent hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: UPF0173 metal-dependent hydrolase FB2170_12861; PFAM: Metallo-beta-lactamase superfamily YP_004263382.1 COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: fbc:FB2170_12851 chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase YP_004263383.1 InterPro IPR003675; KEGG: fbc:FB2170_12846 hypothetical protein; PFAM: Abortive infection protein; SPTR: uncharacterized protein; PFAM: CAAX amino terminal protease family YP_004263384.1 COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: fbc:FB2170_12841 O-succinylbenzoic acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: O-succinylbenzoic acid-CoA ligase; PFAM: AMP-binding enzyme YP_004263385.1 InterPro IPR012910; KEGG: zpr:ZPR_3798 outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; SPTR: outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain YP_004263386.1 COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: fjo:Fjoh_5035 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: uncharacterized protein; PFAM: von Willebrand factor; von Willebrand factor type A domain; Domain of unknown function (DUF3520) YP_004263387.1 COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: fbc:FB2170_09426 major facilitator superfamily (MFS_1) transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily (MFS_1) transporter; manually curated; PFAM: Major Facilitator Superfamily YP_004263388.1 COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: fjo:Fjoh_2546 propionyl-CoA carboxylase; PFAM: Carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase; PFAM: Carboxyl transferase domain YP_004263389.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_12816 predicted dehydrogenase; PFAM: Oxidoreductase, N-terminal; PRIAM: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; SPTR: Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_004263390.1 KEGG: fbc:FB2170_12811 hypothetical protein; SPTR: uncharacterized protein YP_004263391.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR022374: IPR003439: IPR003593; KEGG: fbc:FB2170_12806 ATP-binding component of ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ATP-binding component of ABC transporter; TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_004263392.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fbc:FB2170_12801 metal-dependent hydrolase; SPTR: metal-dependent hydrolase YP_004263393.1 InterPro IPR000182; KEGG: fbc:FB2170_12796 transcriptional regulator, MarR family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Transcriptional regulator, MarR family protein; PFAM: Acetyltransferase (GNAT) family YP_004263394.1 KEGG: fbc:FB2170_12791 hypothetical protein; SPTR: uncharacterized protein YP_004263395.1 COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase, class II; InterPro IPR005677: IPR022761: IPR018951; KEGG: fbc:FB2170_12786 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase; TIGRFAM: Fumarate hydratase, class II; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II YP_004263396.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_12776 TonB-dependent receptor domain protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263397.1 KEGG: rbi:RB2501_15619 fumarate hydratase; SPTR: uncharacterized protein YP_004263398.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fbc:FB2170_12776 TonB-dependent receptor domain protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; PFAM: TonB-dependent Receptor Plug Domain YP_004263399.1 KEGG: fbc:FB2170_12771 hypothetical protein; SPTR: uncharacterized protein YP_004263400.1 COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006659: IPR006660; KEGG: fbc:FB2170_12766 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin) YP_004263401.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_004263402.1 KEGG: fbc:FB2170_12751 hypothetical protein; SPTR: uncharacterized protein YP_004263403.1 COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: fbc:FB2170_12746 L-allo-threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: L-allo-threonine aldolase; PFAM: Beta-eliminating lyase YP_004263404.1 InterPro IPR010879; KEGG: cat:CA2559_08081 hypothetical protein; PFAM: Domain of unknown function DUF1508; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1508) YP_004263405.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_12741 hypothetical protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: uncharacterized protein; PFAM: OmpA family YP_004263406.1 KEGG: fbc:FB2170_12736 protein disulfide isomerase; SPTR: Protein disulfide isomerase; PFAM: Thioredoxin YP_004263407.1 HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: fbc:FB2170_12731 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0133; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_004263408.1 COGs: COG1770 Protease II; InterPro IPR004106: IPR001375; KEGG: fbc:FB2170_12726 hypothetical protein; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Oligopeptidase B; SPTR: uncharacterized protein; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_004263409.1 COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: fbc:FB2170_12721 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cystathionine beta-synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_004263410.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: rbi:RB2501_15544 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 2-amino-3-ketobutyrate CoA ligase (Glycine acetyltransferase); PFAM: Aminotransferase class I and II YP_004263411.1 KEGG: fbc:FB2170_12711 hypothetical protein; SPTR: uncharacterized protein YP_004263412.1 KEGG: fbc:FB2170_12706 hypothetical protein; SPTR: uncharacterized protein YP_004263413.1 KEGG: fbc:FB2170_12701 hypothetical protein; SPTR: uncharacterized protein YP_004263414.1 InterPro IPR018580; KEGG: fbc:FB2170_12696 hypothetical protein; PFAM: Uncharacterised protein family YfhO; SPTR: uncharacterized protein; PFAM: Bacterial membrane protein YfhO YP_004263415.1 InterPro IPR001296; KEGG: fbc:FB2170_12691 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein YP_004263416.1 COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fbc:FB2170_12686 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: uncharacterized protein; PFAM: Polysaccharide biosynthesis protein YP_004263417.1 KEGG: fbc:FB2170_12681 hypothetical protein; SPTR: uncharacterized protein YP_004263418.1 COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439: IPR004602; KEGG: fbc:FB2170_12676 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_004263419.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_12661 RNA polymerase sigma-70 factor, ECF subfamily protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004263420.1 KEGG: rbi:RB2501_15494 hypothetical protein; SPTR: uncharacterized protein YP_004263421.1 COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265; KEGG: fbc:FB2170_12656 endonuclease; PFAM: HhH-GPD domain; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III YP_004263422.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: fbc:FB2170_12651 bacterioferritin comigratory protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Bacterioferritin comigratory protein; PFAM: AhpC/TSA family YP_004263423.1 KEGG: fbc:FB2170_12646 hypothetical protein; SPTR: uncharacterized protein YP_004263424.1 COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: fbc:FB2170_12641 hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: hydrolase; PFAM: Metallo-beta-lactamase superfamily YP_004263425.1 KEGG: rbi:RB2501_15459 hydrolase; SPTR: hydrolase YP_004263426.1 COGs: COG0400 esterase; InterPro IPR003140; KEGG: fbc:FB2170_12631 serine esterase; PFAM: Phospholipase/carboxylesterase; SPTR: Serine esterase; PFAM: Phospholipase/Carboxylesterase YP_004263427.1 KEGG: fbc:FB2170_12626 hypothetical protein; SPTR: uncharacterized protein; PFAM: Chloroplast import component protein (Tic20) YP_004263428.1 KEGG: lbl:LBL_0625 hypothetical protein; SPTR: uncharacterized protein YP_004263429.1 COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_12621 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type YP_004263430.1 InterPro IPR011933; KEGG: fbc:FB2170_12616 hypothetical protein; PFAM: Double transmembrane domain; SPTR: uncharacterized protein; TIGRFAM: Double transmembrane domain; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain YP_004263431.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_12611 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2 YP_004263432.1 COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: fbc:FB2170_10671 acylhydrolase; PFAM: Lipase, GDSL; SPTR: acylhydrolase; PFAM: GDSL-like Lipase/Acylhydrolase YP_004263433.1 KEGG: fbc:FB2170_12376 hypothetical protein; SPTR: uncharacterized protein YP_004263434.1 COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR000581: IPR004404; KEGG: fbc:FB2170_12301 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_004263435.1 COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001: IPR012000: IPR011766: IPR012846; KEGG: fbc:FB2170_12296 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase large subunit; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_004263436.1 COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912: IPR019455: IPR004789; KEGG: fbc:FB2170_12291 acetohydroxyacid synthase small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: acetohydroxyacid synthase small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_004263437.1 COGs: COG0059 Ketol-acid reductoisomerase; HAMAP: Acetohydroxy acid isomeroreductase; InterPro IPR013116: IPR000506: IPR013023; KEGG: fbc:FB2170_12286 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_004263438.1 COGs: COG1171 Threonine dehydratase; InterPro IPR001926: IPR001721: IPR011820; KEGG: fbc:FB2170_12281 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; SPTR: Threonine dehydratase; TIGRFAM: Threonine dehydratase; PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase YP_004263439.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12276 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004263440.1 KEGG: fbc:FB2170_14143 hypothetical protein; SPTR: uncharacterized protein YP_004263441.1 InterPro IPR012910; KEGG: fbc:FB2170_14293 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: TonB dependent/ligand-gated channel; PFAM: TonB-dependent Receptor Plug Domain YP_004263442.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: gfo:GFO_0750 major facilitator superfamily permease arabinose polymer transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily permease-possibly arabinose polymer transporter; PFAM: Major Facilitator Superfamily YP_004263443.1 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: cpi:Cpin_3313 protein of unknown function DUF477; PFAM: Protein of unknown function DUF477; SPTR: Beta-propeller domain of methanol dehydrogenase type protein; PFAM: Domain of unknown function (DUF477) YP_004263444.1 COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR001804: IPR004429; KEGG: fbc:FB2170_12261 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_004263445.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR013709: IPR000891; KEGG: fbc:FB2170_12256 alpha-isopropylmalate synthase 2; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: alpha-isopropylmalate synthase 2; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like YP_004263446.1 COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573: IPR004431; KEGG: rbi:RB2501_14449 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_004263447.1 COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR001030: IPR004430; KEGG: fbc:FB2170_12246 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_004263448.1 COGs: COG1200 RecG-like helicase; InterProIPR014001: IPR001650: IPR004365: IPR011545: IPR 004609; KEGG: fbc:FB2170_12226 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_004263449.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_12221 aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Membrane alanyl aminopeptidase; SPTR: Aminopeptidase; PFAM: Peptidase family M1 YP_004263450.1 InterPro IPR002641; KEGG: rbi:RB2501_14474 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: uncharacterized protein; PFAM: Patatin-like phospholipase YP_004263451.1 COGs: COG4667 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: gfo:GFO_2328 patatin-like phospholipase; PFAM: Patatin/Phospholipase A2-related; SPTR: Patatin-like phospholipase; PFAM: Patatin-like phospholipase YP_004263452.1 KEGG: rbi:RB2501_14479 hypothetical protein; SPTR: uncharacterized protein YP_004263453.1 KEGG: fbc:FB2170_12206 hypothetical protein; SPTR: uncharacterized protein YP_004263454.1 InterPro IPR001173; KEGG: fba:FIC_02408 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2 YP_004263455.1 COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: fba:FIC_02407 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_004263456.1 COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: fbc:FB2170_12201 glutamate synthase; PFAM: Glutamate synthase, central-C; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase; PFAM: Conserved region in glutamate synthase YP_004263457.1 COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933: IPR011650: IPR010168; KEGG: rbi:RB2501_14489 peptidase M20D, amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: Peptidase M20D, amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_004263458.1 InterPro IPR000182; KEGG: fbc:FB2170_16571 predicted acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004263459.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: fbc:FB2170_12186 helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: helicase; PFAM: UvrD/REP helicase YP_004263460.1 KEGG: fjo:Fjoh_0630 hypothetical protein; SPTR: uncharacterized protein YP_004263461.1 COGs: COG0009 translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: fps:FP0869 translation factor; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_004263462.1 COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: fbc:FB2170_12176 flagellar motor protein MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: flagellar motor protein MotB; PFAM: OmpA family YP_004263463.1 COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fbc:FB2170_12171 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004263464.1 InterPro IPR007409; KEGG: fjo:Fjoh_2919 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: uncharacterized protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N) YP_004263465.1 COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372: IPR005790; KEGG: fbc:FB2170_12161 hypothetical protein; PFAM: DNA polymerase III, delta; SPTR: uncharacterized protein; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_004263466.1 InterPro IPR011637; KEGG: fbc:FB2170_12156 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: uncharacterized protein; PFAM: DoxX YP_004263467.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR001017: IPR005476; KEGG: rbi:RB2501_14544 2-oxoisovalerate dehydrogenase, E1 component beta subunit; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoisovalerate dehydrogenase, E1 component beta subunit; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_004263468.1 KEGG: fbc:FB2170_12141 hypothetical protein; SPTR: uncharacterized protein YP_004263469.1 COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: fbc:FB2170_12136 hypothetical protein; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: uncharacterized protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2 YP_004263470.1 COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439: IPR004602; KEGG: fbc:FB2170_12131 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_004263471.1 KEGG: fbc:FB2170_12126 hypothetical protein; SPTR: uncharacterized protein YP_004263472.1 KEGG: ctp:CTRG_02950 similar to potential GRAM domain protein; SPTR: uncharacterized protein YP_004263473.1 KEGG: hmg:100208602 similar to predicted protein; SPTR: uncharacterized protein YP_004263474.1 InterPro IPR001387: IPR019759; KEGG: fbc:FB2170_12111 transcriptional regulator, PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, ; PFAM: Helix-turn-helix; Peptidase S24-like YP_004263475.1 COGs: COG2426 membrane protein; InterPro IPR009577; KEGG: fbc:FB2170_06600 small multidrug export protein; PFAM: small multi-drug export; SPTR: small multidrug export protein; PFAM: small multi-drug export protein YP_004263476.1 COGs: COG2217 Cation transport ATPase; InterProIPR008250: IPR005834: IPR006404: IPR006416: IPR 001757; KEGG: gfo:GFO_0024 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: zinc-transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_004263477.1 KEGG: ddi:DDB_G0267918 hypothetical protein; SPTR: uncharacterized protein YP_004263478.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gfo:GFO_1136 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding-regulatory protein; PFAM: Cyclic nucleotide-binding domain YP_004263479.1 COGs: COG1741 Pirin-related protein; InterPro IPR003829; KEGG: fba:FIC_00549 possible pirin family protein; PFAM: Pirin, N-terminal; SPTR: Pirin family proteins; PFAM: Pirin YP_004263480.1 COGs: COG1741 Pirin-related protein; InterPro IPR003829: IPR008778; KEGG: gfo:GFO_1139 pirin family protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin family protein; PFAM: Pirin C-terminal cupin domain; Pirin YP_004263481.1 InterPro IPR000620; KEGG: fbc:FB2170_11591 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; PFAM: EamA-like transporter family YP_004263482.1 COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001: IPR001650: IPR006935; KEGG: gfo:GFO_1535 helicase-like protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: uncharacterized protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_004263483.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_11396 hydrolase transmembrane protein; PFAM: Beta-lactamase-related; SPTR: hydrolase transmembrane protein; PFAM: Beta-lactamase YP_004263484.1 InterPro IPR000834; KEGG: fbc:FB2170_11411 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: uncharacterized protein; PFAM: Zinc carboxypeptidase YP_004263485.1 KEGG: rbi:RB2501_14959 hypothetical protein; SPTR: uncharacterized protein YP_004263486.1 InterPro IPR002035; KEGG: fbc:FB2170_11421 hypothetical protein; PFAM: von Willebrand factor, type A; SPTR: uncharacterized protein; PFAM: von Willebrand factor type A domain YP_004263487.1 COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041: IPR002888; KEGG: fbc:FB2170_09341 ferredoxin; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: (2Fe-2S)-binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_004263488.1 COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274: IPR006311; KEGG: fbc:FB2170_09346 isoquinoline 1-oxidoreductase, beta subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Aldehyde dehydrogenase (pyrroloquinoline-quinone); SPTR: uncharacterized protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase YP_004263489.1 InterPro IPR003749; KEGG: rbi:RB2501_14949 hypothetical protein; PFAM: ThiamineS; SPTR: uncharacterized protein; PFAM: ThiS family YP_004263490.1 COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR006638: IPR007197: IPR010505: IPR013483; KEGG: fbc:FB2170_09361 molybdenum cofactor biosynthesis protein (MoaA); PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein (MoaA); TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_004263491.1 COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR013482; KEGG: fbc:FB2170_09371 bifunctional molybdenum cofactor biosynthesis protein; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A YP_004263492.1 COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR001763: IPR000594: IPR007901; KEGG: fbc:FB2170_09376 rhodanese-like protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family YP_004263493.1 COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453: IPR005110: IPR005111: IPR020817; KEGG: fbc:FB2170_09391 molybdopterin biosynthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; SMART: Molybdopterin binding; SPTR: Molybdopterin biosynthesis; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_004263494.1 COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: fbc:FB2170_11426 hypothetical protein; PFAM: XdhC- CoxI; SPTR: uncharacterized protein; PFAM: XdhC and CoxI family YP_004263495.1 COGs: COG2068 Uncharacterized MobA-related protein; KEGG: zpr:ZPR_2972 nucleotide-diphospho-sugar transferase; SPTR: Nucleotide-diphospho-sugar transferase; PFAM: Uncharacterized protein family UPF0007 YP_004263496.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fbc:FB2170_11446 RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004263497.1 KEGG: fbc:FB2170_11451 hypothetical protein; SPTR: uncharacterized protein YP_004263498.1 KEGG: cnb:CNBB4170 hypothetical protein; SPTR: uncharacterized protein YP_004263499.1 COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fbc:FB2170_06375 hypothetical protein; PFAM: Uracil-DNA glycosylase-like; SPTR: uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_004263500.1 InterPro IPR011129: IPR002059; KEGG: fbc:FB2170_11566 cold shock protein, DNA-binding protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain YP_004263501.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: zpr:ZPR_2844 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Possible ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004263502.1 KEGG: fbl:Fbal_2255 hypothetical protein; SPTR: integron gene cassette protein YP_004263503.1 COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: fbc:FB2170_12051 hypothetical protein; PFAM: Acyl carrier protein phosphodiesterase; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF479 YP_004263504.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844: IPR005845: IPR005846: IPR005843; KEGG: fjo:Fjoh_4504 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_004263505.1 COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: fbc:FB2170_12036 LipD A biosynthesis related exported protein; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: lipd A biosynthesis related exported protein; PFAM: Bacterial lipid A biosynthesis acyltransferase YP_004263506.1 COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_12031 hypothetical protein; PFAM: Peptidase S54, rhomboid domain; SPTR: uncharacterized protein; PFAM: Rhomboid family YP_004263507.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: rbi:RB2501_14609 lipoprotein/thioderoxin; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: lipoprotein/thioderoxin; PFAM: AhpC/TSA family YP_004263508.1 KEGG: rbi:RB2501_14614 hypothetical protein; SPTR: uncharacterized protein YP_004263509.1 COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113; KEGG: fbc:FB2170_12011 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase-like protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_004263510.1 COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: zpr:ZPR_2711 calcineurin-like phosphoesterase; PFAM: Metallo-dependent phosphatase; SPTR: Fused predicted transporter subunit of ABC superfamily: ATP-binding component; PFAM: Calcineurin-like phosphoesterase YP_004263511.1 COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: fbc:FB2170_12006 chorismate synthase; PFAM: Chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_004263512.1 COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: rbi:RB2501_14634 proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter family YP_004263513.1 KEGG: btk:BT9727_3430 hypothetical protein; SPTR: uncharacterized protein YP_004263514.1 InterPro IPR012910: IPR011935; KEGG: fbc:FB2170_11971 TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; SPTR: TonB-linked outer membrane protein; TIGRFAM: Conserved hypothetical protein CHP02231; PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: conserved hypothetical protein YP_004263515.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_10842 membrane transport protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel YP_004263516.1 COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: fbc:FB2170_11966 hypothetical protein; PFAM: thiol-disulphide oxidoreductase DCC; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF393 YP_004263517.1 InterPro IPR019734: IPR001440; KEGG: fbc:FB2170_11961 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: uncharacterized protein; PFAM: Tetratricopeptide repeat YP_004263518.1 InterPro IPR001869; KEGG: fbc:FB2170_11951 listeriolysin O; PFAM: Thiol-activated cytolysin; SPTR: Listeriolysin O; PFAM: Thiol-activated cytolysin YP_004263519.1 COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR007696: IPR000432; KEGG: fbc:FB2170_11946 DNA mismatch repair MutS protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair MutS protein; PFAM: MutS domain V YP_004263520.1 COGs: COG3129 SAM-dependent methyltransferase; InterPro IPR010286; KEGG: gfo:GFO_2659 SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted; PRIAM: rRNA (adenine-N(6)-)-methyltransferase; SPTR: Ribosomal RNA large subunit methyltransferase F; PFAM: Protein of unknown function (DUF890) YP_004263521.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: fps:FP0945 DEAD-box ATP dependent DNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Probable ATP-dependent RNA helicase, DEAD/DEAH box family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_004263522.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR001650: IPR011545: IPR005580; KEGG: gfo:GFO_2658 ATP-independent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-independent RNA helicase; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_004263523.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); KEGG: cat:CA2559_10158 short-chain dehydrogenase; SPTR: Short chain dehydrogenase; PFAM: short chain dehydrogenase YP_004263524.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: zpr:ZPR_2339 AhpC/TSA family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: AhpC/TSA family protein; PFAM: AhpC/TSA family YP_004263525.1 COGs: COG1278 Cold shock protein; InterPro IPR011129: IPR002059; KEGG: fbc:FB2170_01080 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; PFAM: 'Cold-shock' DNA-binding domain YP_004263526.1 COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: rbi:RB2501_02805 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: NADH dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004263527.1 InterPro IPR001623; KEGG: gfo:GFO_1973 DnaJ-like protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein Hsp40; PFAM: DnaJ domain YP_004263528.1 COGs: COG0693 intracellular protease/amidase; InterPro IPR002818; KEGG: cat:CA2559_10123 ThiJ/PfpI; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI; PFAM: DJ-1/PfpI family YP_004263529.1 COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR001670; KEGG: cpi:Cpin_1126 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase (NADP(+)); SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase YP_004263530.1 COGs: COG2130 NADP-dependent oxidoreductase; InterPro IPR020843: IPR013149; KEGG: cat:CA2559_11258 YfmJ; PFAM: Alcohol dehydrogenase, C-terminal; PRIAM: 2-alkenal reductase; SMART: Polyketide synthase, enoylreductase; SPTR: YfmJ; PFAM: Zinc-binding dehydrogenase YP_004263531.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cat:CA2559_10128 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; PFAM: Nitroreductase family YP_004263532.1 InterPro IPR001647; KEGG: fps:FP0992 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family YP_004263533.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR006145: IPR000748; KEGG: fbc:FB2170_11621 RNA pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_004263534.1 COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: coc:Coch_1889 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Peptidyl-dipeptidase Dcp; SPTR: Peptidyl-dipeptidase Dcp; PFAM: Peptidase family M3 YP_004263535.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: fjo:Fjoh_2992 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_004263536.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1455 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor domain protein; PFAM: TonB-dependent Receptor Plug Domain YP_004263537.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: bfs:BF1931 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: two-component system response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263538.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fbc:FB2170_15258 two-component system sensor protein, no kinase domain; PFAM: Signal transduction histidine kinase, internal region; SPTR: two-component system sensor protein, without kinase domain; PFAM: Histidine kinase YP_004263539.1 InterPro IPR018248; KEGG: dat:HRM2_01140 calcium-binding EF hand domain protein; PFAM: EF-hand; SPTR: uncharacterized protein YP_004263540.1 KEGG: lic:LIC10561 hypothetical protein; SPTR: uncharacterized protein YP_004263541.1 COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: fnu:FN2119 hypothetical protein; PFAM: MORN variant; SPTR: uncharacterized protein; PFAM: MORN repeat variant YP_004263542.1 COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: gfo:GFO_3200 electron transport protein; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO2/SenC family protein; PFAM: SCO1/SenC YP_004263543.1 InterPro IPR000620; KEGG: bfs:BF0848 transmembrane protein; PFAM: Drug/metabolite transporter; SPTR: permease; PFAM: EamA-like transporter family YP_004263544.1 COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: cat:CA2559_10113 Na+/H+ antiporter; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Na+/H+ antiporter; PFAM: Na+/H+ antiporter family YP_004263545.1 COGs: COG3782 conserved hypothetical protein; InterPro IPR015003; KEGG: ant:Arnit_2035 hypothetical protein; PFAM: Protein of unknown function DUF1853; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1853) YP_004263546.1 InterPro IPR000326; KEGG: fba:FIC_01403 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: uncharacterized protein; PFAM: PAP2 superfamily YP_004263547.1 KEGG: bhy:BHWA1_00893 hypothetical protein; SPTR: Lipoprotein YP_004263548.1 KEGG: sde:Sde_1175 agarase; PRIAM: Beta-agarase; SPTR: Beta-agarase D YP_004263549.1 KEGG: zpr:ZPR_0473 hypothetical protein; SPTR: uncharacterized protein YP_004263550.1 COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: zpr:ZPR_3049 HSP20-like chaperone; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein; PFAM: Hsp20/alpha crystallin family YP_004263551.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: caa:Caka_2784 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC-family transcriptional regulatory protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263552.1 COGs: COG3145 Alkylated DNA repair protein; KEGG: fjo:Fjoh_3770 alkylated DNA repair protein-like protein; SPTR: Alkylated DNA repair protein-like protein; PFAM: 2OG-Fe(II) oxygenase superfamily YP_004263553.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: meh:M301_0793 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; PFAM: Nitroreductase family YP_004263554.1 COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR020843: IPR013154: IPR013149: IPR014182; KEGG: cat:CA2559_10178 alcohol dehydrogenase, zinc-containing protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SMART: Polyketide synthase, enoylreductase; SPTR: Zinc-containing alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase YP_004263555.1 InterPro IPR013096; KEGG: sus:Acid_7472 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel domain protein; PFAM: Cupin domain YP_004263556.1 KEGG: cat:CA2559_10183 hypothetical protein; SPTR: uncharacterized protein YP_004263557.1 InterPro IPR003534; KEGG: avn:Avin_35790 hypothetical protein; PFAM: Major royal jelly-related; SPTR: uncharacterized protein; PFAM: Major royal jelly protein YP_004263558.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: cat:CA2559_10188 transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: transcriptional regulator, AraC family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_004263559.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: cat:CA2559_10193 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoylase-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family YP_004263560.1 COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR020843: IPR013154: IPR013149; KEGG: cat:CA2559_10198 ripening-induced protein- Zn-containing oxidoreductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase; SPTR: Zinc-containing alcohol dehydrogenase (NADPH quinone oxidoreductase); PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_004263561.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: dat:HRM2_14960 dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenases/reductases family (SDR) protein; PFAM: short chain dehydrogenase YP_004263562.1 COGs: COG2249 NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cat:CA2559_10213 probable NADP(H) oxidoreductase; PFAM: Flavodoxin-like fold; SPTR: Probable NADP(H) oxidoreductase; PFAM: Flavodoxin-like fold YP_004263563.1 COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153: IPR003148: IPR004771; KEGG: cat:CA2559_10218 potassium efflux system protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Potassium efflux system protein; TIGRFAM: K+/H+ exchanger; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_004263564.1 COGs: COG3070 Regulator of competence-specific genes; InterPro IPR007076; KEGG: dol:Dole_0165 TfoX domain-containing protein; PFAM: TfoX, N-terminal; SPTR: TfoX domain protein; PFAM: TfoX N-terminal domain YP_004263565.1 KEGG: pat:Patl_0879 hypothetical protein; SPTR: Iota-carrageenase YP_004263566.1 COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: zpr:ZPR_2629 flavoprotein NADH-dependent oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: 12-oxophytodienoate reductase; SPTR: Flavoprotein NADH-dependent oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_004263567.1 COGs: COG5337 Spore coat assembly protein; InterPro IPR014867; KEGG: sfr:Sfri_0739 spore coat assembly protein-like protein; PFAM: Spore coat protein CotH; SPTR: Spore coat protein CotH; PFAM: CotH protein YP_004263568.1 COGs: COG4111 conserved hypothetical protein; InterPro IPR000086; KEGG: fjo:Fjoh_0783 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; PFAM: NUDIX domain YP_004263569.1 KEGG: pha:PSHAa1502 hypothetical protein; SPTR: uncharacterized protein YP_004263570.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: phe:Phep_3767 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family YP_004263571.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cno:NT01CX_0164 ribose transport ATP-binding protein RbsA; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter YP_004263572.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: phe:Phep_3765 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component YP_004263573.1 COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131: IPR013118; KEGG: rba:RB2403 D-mannonate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Mannitol 2-dehydrogenase; SPTR: D-mannonate oxidoreductase; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_004263574.1 COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: zpr:ZPR_3192 PfkB family carbohydrate kinase; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: PfkB family carbohydrate kinase; PFAM: pfkB family carbohydrate kinase YP_004263575.1 InterPro IPR001647; KEGG: rbi:RB2501_04325 transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family YP_004263576.1 InterPro IPR009305; KEGG: fjo:Fjoh_1822 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF962) YP_004263577.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cat:CA2559_06470 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: uncharacterized protein; PFAM: Outer membrane efflux protein YP_004263578.1 COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: rbi:RB2501_08270 hypothetical protein; PFAM: Secretion protein HlyD; SPTR: uncharacterized protein YP_004263579.1 COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: rbi:RB2501_08265 HlyB/MsbA family ABC transporter; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SPTR: HlyB/MsbA family ABC transporter; PFAM: ABC transporter YP_004263580.1 InterPro IPR001647; KEGG: fps:FP0423 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein, TetR family; PFAM: Bacterial regulatory proteins, tetR family YP_004263581.1 KEGG: cts:Ctha_0672 hypothetical protein; SPTR: uncharacterized protein YP_004263582.1 KEGG: cyj:Cyan7822_2577 hypothetical protein; SPTR: uncharacterized protein YP_004263583.1 COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: cat:CA2559_10163 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; PFAM: Fatty acid desaturase YP_004263584.1 InterPro IPR000595; KEGG: cat:CA2559_10168 hypothetical protein; PFAM: Cyclic nucleotide-binding domain; SPTR: uncharacterized protein; PFAM: Cyclic nucleotide-binding domain YP_004263585.1 COGs: COG1278 Cold shock protein; InterPro IPR011129: IPR002059; KEGG: fbc:FB2170_01856 cold shock protein-like CspA family; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; PFAM: 'Cold-shock' DNA-binding domain YP_004263586.1 COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: bae:BATR1942_04300 guanine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; PRIAM: Guanine deaminase; SPTR: Cytidine/deoxycytidylate deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_004263587.1 COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: gfo:GFO_1918 hypothetical protein; PFAM: Protein of unknown function DUF421; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF421) YP_004263588.1 KEGG: fjo:Fjoh_0179 hypothetical protein; SPTR: uncharacterized protein YP_004263589.1 KEGG: cat:CA2559_12073 hypothetical protein; SPTR: uncharacterized protein YP_004263590.1 COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR006638: IPR007197; KEGG: cat:CA2559_12078 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein YP_004263591.1 COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR001387: IPR019759; KEGG: fsu:Fisuc_2822 transcriptional repressor, LexA family; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: uncharacterized protein; PFAM: Helix-turn-helix; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_004263592.1 COGs: COG3593 ATP-dependent endonuclease of the OLD family; KEGG: cpi:Cpin_3013 hypothetical protein; SPTR: uncharacterized protein YP_004263593.1 KEGG: bav:BAV0367 hypothetical protein; SPTR: Conserved hypothetical phage protein; PFAM: UvrD/REP helicase YP_004263594.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_14588 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily YP_004263595.1 KEGG: sma:SAV_3861 hypothetical protein; SPTR: uncharacterized protein YP_004263596.1 COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: sdl:Sdel_1408 restriction endonuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease YP_004263597.1 KEGG: fps:FP2346 glyoxalase; SPTR: Glyoxalase YP_004263598.1 KEGG: tps:THAPSDRAFT_bd2050 plastid RNA polymerase beta subunit, plastid-encoded; SPTR: Plastid RNA polymerase beta subunit, plastid-encoded YP_004263599.1 InterPro IPR000612; KEGG: gfo:GFO_1522 membrane protein, UPF0057; PFAM: Uncharacterised protein family UPF0057; SPTR: Membrane protein, UPF0057; PFAM: Uncharacterized protein family UPF0057 YP_004263600.1 KEGG: gfo:GFO_1923 membrane protein; SPTR: Membrane protein YP_004263601.1 COGs: COG3665 conserved hypothetical protein; InterPro IPR018959; KEGG: gfo:GFO_0003 hypothetical protein; PFAM: Domain of unknown function DUF1989; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1989) YP_004263602.1 COGs: COG3403 conserved hypothetical protein; InterPro IPR014988; KEGG: gfo:GFO_0001 hypothetical protein; PFAM: Uncharacterised protein family, YqcI/YcgG; SPTR: uncharacterized protein; PFAM: YqcI/YcgG family YP_004263603.1 InterPro IPR000757; KEGG: rba:RB2702 kappa-carrageenase [precursor]; PFAM: Glycoside hydrolase, family 16; SPTR: Kappa-carrageenase; PFAM: Glycosyl hydrolases family 16 YP_004263604.1 KEGG: etr:ETAE_2743 hypothetical protein; SPTR: uncharacterized protein YP_004263605.1 KEGG: rbi:RB2501_08560 phosphoesterase, PA-phosphatase related protein; SPTR: Phosphoesterase, PA-phosphatase related protein; PFAM: PAP2 superfamily YP_004263606.1 InterPro IPR013517; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: FG-GAP; SPTR: Rhs family protein; PFAM: ASPIC and UnbV YP_004263607.1 KEGG: pkn:PKH_122370 DNA-directed RNA polymerase 3 largest subunit; SPTR: uncharacterized protein YP_004263608.1 KEGG: sbi:SORBI_03g004950 hypothetical protein; SPTR: uncharacterized protein YP_004263609.1 KEGG: rbi:RB2501_14749 hypothetical protein; SPTR: uncharacterized protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_004263610.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR001017: IPR005476; KEGG: cat:CA2559_10943 oxidoreductase; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_004263611.1 COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: fbc:FB2170_11886 oxidoreductase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase; PFAM: 2OG-Fe(II) oxygenase superfamily YP_004263612.1 COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: fbc:FB2170_11891 translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; SPTR: translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, , prokaryotic YP_004263613.1 KEGG: fbc:FB2170_11896 hypothetical protein; SPTR: uncharacterized protein YP_004263614.1 COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: fbc:FB2170_11901 phosphorylase; PFAM: Nucleoside phosphorylase domain; SPTR: Purine nucleoside phosphorylase II; PFAM: Phosphorylase superfamily YP_004263615.1 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: fbc:FB2170_11906 hypothetical protein; SPTR: uncharacterized protein; PFAM: NMT1/THI5 like YP_004263616.1 COGs: COG0692 Uracil DNA glycosylase; HAMAP: Uracil-DNA glycosylase; InterPro IPR005122: IPR002043; KEGG: fbc:FB2170_11911 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_004263617.1 COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: fbc:FB2170_11941 hypothetical protein; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: uncharacterized protein; PFAM: C4-dicarboxylate anaerobic carrier YP_004263618.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR011545; KEGG: gfo:GFO_0617 DEAD box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: DEAD box helicase; PFAM: DEAD/DEAH box helicase YP_004263619.1 COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: phe:Phep_0455 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; PFAM: OsmC-like protein YP_004263620.1 COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR001753: IPR010198; KEGG: fjo:Fjoh_2784 naphthoate synthase; PFAM: Crotonase, core; PRIAM: Naphthoate synthase; SPTR: 1,4-Dihydroxy-2-naphthoate synthase; TIGRFAM: Naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase) YP_004263621.1 KEGG: fbc:FB2170_11291 glycosyltransferase; SPTR: glycosyltransferase YP_004263622.1 COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001: IPR001650: IPR006935; KEGG: fbc:FB2170_11286 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: uncharacterized protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_004263623.1 KEGG: fbc:FB2170_11276 hypothetical protein; SPTR: uncharacterized protein YP_004263624.1 COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042: IPR007627: IPR007624: IPR007630: IPR 014284; KEGG: rbi:RB2501_15004 sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: sigma factor A; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_004263625.1 KEGG: fbc:FB2170_11266 hypothetical protein; SPTR: uncharacterized protein YP_004263626.1 KEGG: fbc:FB2170_11261 hypothetical protein; SPTR: uncharacterized protein YP_004263627.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR001789; KEGG: fbc:FB2170_11231 two-component system sensory/regulatory protein (hybrid family); PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; SPTR: Two-component system sensory/regulatory protein (Hybrid family); PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004263628.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: rbi:RB2501_15054 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: Thioesterase superfamily; SPTR: 4-hydroxybenzoyl-CoA thioesterase domain protein; PFAM: Thioesterase superfamily YP_004263629.1 COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: fbc:FB2170_11221 hypothetical protein; PFAM: Protein of unknown function DUF72; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF72 YP_004263630.1 KEGG: fbc:FB2170_11216 glyoxalase; SPTR: Glyoxalase YP_004263631.1 COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: fbc:FB2170_11211 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: conserved hypothetical protein TIGR02453 YP_004263632.1 COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_11206 hypothetical protein; PRIAM: Serine O-acetyltransferase; SPTR: uncharacterized protein; TIGRFAM: serine O-acetyltransferase YP_004263633.1 COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856; KEGG: fbc:FB2170_11201 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B YP_004263634.1 COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR020097: IPR001406; KEGG: fbc:FB2170_11186 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A 1; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_004263635.1 KEGG: fbc:FB2170_11181 hypothetical protein; SPTR: uncharacterized protein YP_004263636.1 KEGG: fbc:FB2170_11176 hypothetical protein; SPTR: uncharacterized protein YP_004263637.1 KEGG: fbc:FB2170_11166 hypothetical protein; SPTR: uncharacterized protein YP_004263638.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fbc:FB2170_11161 response regulator DrrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Response regulator DrrA; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_004263639.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR003660; KEGG: fbc:FB2170_11156 two-component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component sensor histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004263640.1 COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein HisIE; InterPro IPR002496: IPR021130: IPR008179: IPR023019; KEGG: fbc:FB2170_10966 histidine biosynthesis bifunctional protein; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Histidine biosynthesis bifunctional protein; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_004263641.1 COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Histidine biosynthesis, HisF; InterPro IPR006062: IPR004651; KEGG: zpr:ZPR_2000 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_004263642.1 COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR006062: IPR006063: IPR023016; KEGG: fbc:FB2170_10946 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_004263643.1 COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR000991: IPR010139; KEGG: fjo:Fjoh_2874 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_004263644.1 COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR013954: IPR000807: IPR005954: IPR006543; KEGG: fbc:FB2170_10931 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase, central region; PRIAM: Histidinol-phosphatase; SPTR: Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase YP_004263645.1 COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839: IPR005861; KEGG: fbc:FB2170_10926 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_004263646.1 COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: fbc:FB2170_10921 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_004263647.1 COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR013820: IPR013115: IPR020621; KEGG: fbc:FB2170_10916 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_004263648.1 COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: fbc:FB2170_10911 membrane protease subunit stomatin/prohibitin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit stomatin/prohibitin-like protein; PFAM: SPFH domain / Band 7 family YP_004263649.1 KEGG: fbc:FB2170_10906 hypothetical protein; SPTR: uncharacterized protein YP_004263650.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020842: IPR002198: IPR011284; KEGG: fbc:FB2170_10901 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-ACP reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-ACP reductase YP_004263651.1 KEGG: fbc:FB2170_00765 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1569) YP_004263652.1 COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR003781: IPR005811: IPR005810; KEGG: fbc:FB2170_10896 succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SMART: CoA-binding; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_004263653.1 COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR020573: IPR001451; KEGG: fjo:Fjoh_2900 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004263654.1 COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR015365: IPR013185: IPR001059: IPR011768; KEGG: fbc:FB2170_10886 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SMART: Elongation factor P, C-terminal; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_004263655.1 COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451: IPR010137; KEGG: fbc:FB2170_10881 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; PRIAM:Acyl-ACP--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: UDP-N-acetylglucosamine acyltransferase; TIGRFAM:Acyl-ACP--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase YP_004263656.1 COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: Beta-hydroxyacyl-ACP dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; InterPro IPR004463: IPR013114: IPR010084; KEGG: fbc:FB2170_10876 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-ACP dehydratase, FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: Beta-hydroxyacyl-ACP dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-ACP dehydratase FabZ YP_004263657.1 COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR020573: IPR001451: IPR007691; KEGG: fbc:FB2170_10871 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004263658.1 COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR003607: IPR006674; KEGG: gfo:GFO_1777 metal-dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Phosphohydrolase; PFAM: HD domain YP_004263659.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR013973; KEGG: fbc:FB2170_10861 response regulator; PFAM: Signal transduction response regulator, receiver domain; PglZ domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: PglZ domain; Response regulator receiver domain YP_004263660.1 COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: fbc:FB2170_10856 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_004263661.1 COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886: IPR007698; KEGG: fbc:FB2170_10836 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: Alanine dehydrogenase; SPTR: Alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_004263662.1 KEGG: fbc:FB2170_10831 hypothetical protein; SPTR: uncharacterized protein YP_004263663.1 InterPro IPR002872; KEGG: fps:FP1706 antibiotic resistance protein; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase YP_004263664.1 COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase AroB, subgroup; InterPro IPR002658: IPR016037; KEGG: fbc:FB2170_10821 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_004263665.1 KEGG: fbc:FB2170_10816 hypothetical protein; SPTR: uncharacterized protein YP_004263666.1 KEGG: fbc:FB2170_10811 hypothetical protein; SPTR: uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain YP_004263667.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019888: IPR019887; KEGG: rbi:RB2501_15279 probable transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulator; PFAM: AsnC family YP_004263668.1 InterPro IPR000834; KEGG: fbc:FB2170_10801 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: uncharacterized protein; PFAM: Zinc carboxypeptidase YP_004263669.1 InterPro IPR001387; KEGG: fbc:FB2170_10796 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: uncharacterized protein; PFAM: Helix-turn-helix YP_004263670.1 KEGG: zpr:ZPR_2722 hypothetical protein; SPTR: uncharacterized protein YP_004263671.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_10781 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: uncharacterized protein; PFAM: Fatty acid hydroxylase superfamily YP_004263672.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: fbc:FB2170_10771 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A YP_004263673.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594: IPR001241: IPR013506: IPR006171; KEGG: fbc:FB2170_10766 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA topoisomerase IV subunit B; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus YP_004263674.1 COGs: COG0012 GTPase probable translation factor; InterPro IPR002917: IPR013029: IPR004396; KEGG: fbc:FB2170_10756 GTP-binding protein; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_004263675.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_01565 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263676.1 InterPro IPR001450; KEGG: rbi:RB2501_15329 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; SPTR: 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_004263677.1 InterPro IPR008670; KEGG: fbc:FB2170_10741 hypothetical protein; PFAM: Acyl-CoA reductase; SPTR: uncharacterized protein; PFAM: Acyl-CoA reductase (LuxC) YP_004263678.1 COGs: COG1932 Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; InterPro IPR000192: IPR022278; KEGG: fbc:FB2170_10736 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine aminotransferase; PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_004263679.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: fbc:FB2170_10731 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_004263680.1 COGs: COG5403 conserved hypothetical protein; KEGG: fbc:FB2170_10726 hypothetical protein; SPTR: uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF937) YP_004263681.1 KEGG: fbc:FB2170_10721 hypothetical protein; SPTR: uncharacterized protein YP_004263682.1 KEGG: fbc:FB2170_10716 hypothetical protein; SPTR: uncharacterized protein YP_004263683.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284: IPR014327; KEGG: zpr:ZPR_0255 ECF-type RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1 YP_004263684.1 COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: zpr:ZPR_0254 FecR protein; PFAM: FecR protein; SPTR: FecR protein; PFAM: FecR protein YP_004263685.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: zpr:ZPR_0253 TonB-dependent receptor Plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent Receptor Plug domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_004263686.1 KEGG: zpr:ZPR_0252 hypothetical protein; SPTR: uncharacterized protein YP_004263687.1 InterPro IPR006311; KEGG: cpi:Cpin_5275 hypothetical protein; SPTR: uncharacterized protein; PFAM: Calcineurin-like phosphoesterase YP_004263688.1 KEGG: cpi:Cpin_5742 hypothetical protein; SPTR: uncharacterized protein YP_004263689.1 KEGG: fbc:FB2170_14973 monoheme cytochrome c, SPTR: Monoheme cytochrome c YP_004263690.1 COGs: COG2041 Sulfite oxidase; InterPro IPR000572: IPR005066: IPR006311; KEGG: fbc:FB2170_14968 sulfite oxidase and related enzyme; PFAM: Oxidoreductase, molybdopterin-binding domain; Moybdenum cofactor oxidoreductase, dimerisation; PRIAM: Sulfite oxidase; SPTR: Sulfite oxidase and related enzyme; manually curated; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain YP_004263691.1 KEGG: ach:Achl_0985 permease for cytosine/purines uracil thiamine allantoin; SPTR: Permease for cytosine/purines uracil thiamine allantoin YP_004263692.1 KEGG: fbc:FB2170_10701 hypothetical protein; SPTR: uncharacterized protein YP_004263693.1 COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR020602: IPR001474; KEGG: fbc:FB2170_10696 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_004263694.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: fbc:FB2170_10691 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter YP_004263695.1 InterPro IPR003675; KEGG: amr:AM1_0712 hypothetical protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family; PFAM: CAAX amino terminal protease family YP_004263696.1 InterPro IPR014127; KEGG: fbc:FB2170_10686 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757 YP_004263697.1 COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: zpr:ZPR_2806 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain YP_004263698.1 COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833: IPR010016; KEGG: zpr:ZPR_2807 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: Allophanate hydrolase; TIGRFAM: Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370 YP_004263699.1 COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: fbc:FB2170_12361 hypothetical protein; PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; SPTR: uncharacterized protein; PFAM: LamB/YcsF family YP_004263700.1 COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: fbc:FB2170_12366 Mn2+/Fe2+ transporter, NRAMP family protein; PFAM: Natural resistance-associated macrophage protein; SPTR: Mn2+/Fe2+ transporter, NRAMP family protein; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters YP_004263701.1 KEGG: zpr:ZPR_4162 hypothetical protein; SPTR: uncharacterized protein YP_004263702.1 InterPro IPR019115; KEGG: zpr:ZPR_4164 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200 YP_004263703.1 COGs: COG0606 ATPase with chaperone activity; InterPro IPR003593: IPR000523: IPR004482; KEGG: fbc:FB2170_12411 magnesium chelatase, subunit ChlI; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein YP_004263704.1 COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_12451 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; PRIAM: Acyl-homoserine-lactone acylase; SPTR: Penicillin amidase; PFAM: Penicillin amidase YP_004263705.1 COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: Lysidine-tRNA(Ile) synthetase; InterPro IPR012796: IPR011063: IPR012795: IPR012094; KEGG: fbc:FB2170_12466 cell-cycle protein; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_004263706.1 COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: fbc:FB2170_12476 para-aminobenzoate synthase component I; PFAM: Chorismate binding, C-terminal; PRIAM: Anthranilate synthase; SPTR: Para-aminobenzoate synthase component I; PFAM: chorismate binding enzyme YP_004263707.1 COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: fbc:FB2170_12481 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: uncharacterized protein; PFAM: NADPH-dependent FMN reductase YP_004263708.1 KEGG: fbc:FB2170_12486 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1624) YP_004263709.1 InterPro IPR006622: IPR018967; KEGG: pub:SAR11_0139 glutamate synthetas; PFAM: Iron sulphur-containing domain, CDGSH-type; SPTR: Zinc finger CDGSH-type domain protein; PFAM: Iron-binding zinc finger CDGSH type YP_004263710.1 COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399: IPR013749; KEGG: cat:CA2559_10848 probable phosphomethylpyrimidine kinase (ThiD); PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_004263711.1 COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258: IPR013027: IPR004099; KEGG: fbc:FB2170_12491 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_004263712.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019888: IPR019887; KEGG: fbc:FB2170_12496 AsnC-family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: AsnC-family transcriptional regulator; PFAM: AsnC family YP_004263713.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_12501 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine beta-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004263714.1 COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770: IPR018461; KEGG: cat:CA2559_12548 Na+/H+ antiporter; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Na+/H+ antiporter NnaC; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC YP_004263715.1 COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479; KEGG: fbc:FB2170_12511 thioredoxin peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Alkyl hydroperoxide reductase, subunit C; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family YP_004263716.1 InterPro IPR013766; KEGG: fbc:FB2170_12516 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; PFAM: Thioredoxin YP_004263717.1 KEGG: fps:FP1727 hypothetical protein; SPTR: uncharacterized protein YP_004263718.1 COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: cat:CA2559_07000 ankyrin-like protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Ankyrin-like protein; PFAM: Ankyrin repeat YP_004263719.1 COGs: COG0753 Catalase; InterPro IPR018028: IPR010582; KEGG: sde:Sde_0830 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; PFAM: Catalase; Catalase-related immune-responsive YP_004263720.1 COGs: COG2077 Peroxiredoxin; HAMAP: thiol peroxidase Tpx; InterPro IPR013740: IPR002065; KEGG: fbc:FB2170_12526 thiol peroxidase; PFAM: Redoxin; SPTR: Probable thiol peroxidase; PFAM: Redoxin YP_004263721.1 COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: fbc:FB2170_12531 probable diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; SPTR: Probable diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase YP_004263722.1 COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR018541: IPR002543; KEGG: rbi:RB2501_14289 FtsK/SpoIIIE family protein; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; SPTR: FtsK/SpoIIIE family protein; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_004263723.1 InterPro IPR004564; KEGG: rbi:RB2501_14284 hypothetical protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: uncharacterized protein; PFAM: Outer membrane lipoprotein carrier protein LolA YP_004263724.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: fbc:FB2170_12551 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: uncharacterized protein; PFAM: Predicted permease YjgP/YjgQ family YP_004263725.1 COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; InterPro IPR000422: IPR000926; KEGG: cat:CA2559_06265 riboflavin biosynthesis protein; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; SPTR: riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004263726.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_12561 polysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Polysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_004263727.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: fbc:FB2170_12566 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; PFAM: Nitroreductase family YP_004263728.1 InterPro IPR002781; KEGG: rbi:RB2501_14259 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: uncharacterized protein; PFAM: Sulfite exporter TauE/SafE YP_004263729.1 KEGG: shn:Shewana3_3382 hypothetical protein; SPTR: uncharacterized protein YP_004263730.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_3288 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain YP_004263731.1 KEGG: zpr:ZPR_3020 protein containing PKD domain; SPTR: uncharacterized protein YP_004263732.1 KEGG: fjo:Fjoh_3287 hypothetical protein; SPTR: uncharacterized protein YP_004263733.1 KEGG: zpr:ZPR_3182 transcription regulator; SPTR: uncharacterized protein; PFAM: Ferric uptake regulator family YP_004263734.1 KEGG: cpr:CPR_1878 polysaccharide deacetylase; SPTR: uncharacterized protein YP_004263735.1 InterPro IPR010432; KEGG: zpr:ZPR_2071 RDD family protein; PFAM: RDD; SPTR: RDD family protein; PFAM: RDD family YP_004263737.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fjo:Fjoh_3896 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: uncharacterized protein; PFAM: SpoU rRNA Methylase family YP_004263738.1 InterPro IPR014895; KEGG: sde:Sde_2547 translation initiation factor SUI1; PFAM: Alginate lyase 2; PRIAM: Poly(beta-D-mannuronate) lyase; SPTR: alginate lyase; PFAM: Alginate lyase YP_004263739.1 COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: cpi:Cpin_3470 McrBC 5-methylcytosine restriction system component-like protein; PFAM: 5-methylcytosine restriction system component; SPTR: uncharacterized protein; PFAM: McrBC 5-methylcytosine restriction system component YP_004263740.1 COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR011704; KEGG: lby:Lbys_1858 ATPase associated with various cellular activities aaa_5; PFAM: ATPase, AAA-5; SPTR: GTPase subunit of restriction endonuclease-like protein; PFAM: AAA domain (dynein-related subfamily) YP_004263741.1 COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ftn:FTN_1154 type I restriction-modification system, subunit S; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction-modification system, subunit S; PFAM: Type I restriction modification DNA specificity domain YP_004263742.1 COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: sbp:Sbal223_4455 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: N-6 DNA Methylase family; PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_004263743.1 KEGG: chu:CHU_0041 hypothetical protein; SPTR: uncharacterized protein YP_004263744.1 COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterProIPR014001: IPR007409: IPR006935: IPR001650: IPR 013670; KEGG: sbp:Sbal223_4457 EcoEI R domain protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Helicase, C-terminal; Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal; SPTR: Type I restriction-modification system, R subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; EcoEI R protein C-terminal YP_004263745.1 InterPro IPR006016; KEGG: fbc:FB2170_14488 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein; PFAM: Universal stress protein family YP_004263746.1 COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14473 universal stress protein family; PFAM: UspA; SPTR: universal stress protein UspA; PFAM: Universal stress protein family YP_004263747.1 InterPro IPR006660; KEGG: cat:CA2559_10508 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: uncharacterized protein; PFAM: ArsC family YP_004263748.1 KEGG: chu:CHU_0965 hypothetical protein; SPTR: uncharacterized protein YP_004263749.1 KEGG: fbc:FB2170_14538 hypothetical protein; SPTR: uncharacterized protein YP_004263750.1 KEGG: fjo:Fjoh_0935 hypothetical protein; SPTR: uncharacterized protein YP_004263751.1 KEGG: wch:wcw_0302 septum-peptidoglycan biosynthetic protein; SPTR: Septum-peptidoglycan biosynthetic protein YP_004263752.1 KEGG: zpr:ZPR_1252 hypothetical protein; SPTR: uncharacterized protein YP_004263753.1 KEGG: sml:Smlt3230 hypothetical protein; SPTR: uncharacterized protein YP_004263754.1 COGs: COG2072 flavoprotein involved in K+ transport; KEGG: zpr:ZPR_4315 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SPTR: Cation transporter; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004263755.1 KEGG: cat:CA2559_06920 hypothetical protein; SPTR: uncharacterized protein; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004263756.1 KEGG: caa:Caka_0315 hypothetical protein; SPTR: uncharacterized protein YP_004263757.1 KEGG: fma:FMG_0625 hypothetical protein; SPTR: uncharacterized protein YP_004263758.1 COGs: COG3738 conserved hypothetical protein; InterPro IPR009706; KEGG: hch:HCH_06899 hypothetical protein; PFAM: Protein of unknown function DUF1287; SPTR: Uncharacterized protein conserved in bacteria; PFAM: Domain of unknown function (DUF1287) YP_004263759.1 KEGG: fps:FP2424 lipoprotein precursor; SPTR: uncharacterized protein YP_004263760.1 KEGG: pbe:PB001059.02.0 guanylyl cyclase; SPTR: uncharacterized protein YP_004263761.1 KEGG: mau:Micau_0641 hypothetical protein; SPTR: uncharacterized protein YP_004263762.1 KEGG: fjo:Fjoh_0733 hypothetical protein; SPTR: uncharacterized protein YP_004263763.1 KEGG: vsp:VS_1055 lysine-arginine-ornithine-binding periplasmic protein; SPTR: Amino acid ABC transporter amino acid-binding protein YP_004263764.1 KEGG: mmw:Mmwyl1_0385 hypothetical protein; SPTR: uncharacterized protein YP_004263765.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: dfe:Dfer_1502 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263766.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR019734: IPR001440: IPR010559: IPR003594; KEGG: cpi:Cpin_6624 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; ATPase-like, ATP-binding domain; SPTR: Tetratricopeptide TPR_2; PFAM: Histidine kinase; Tetratricopeptide repeat YP_004263767.1 KEGG: ipo:Ilyop_0755 protein of unknown function DUF2207, membrane; SPTR: Thiol-disulfide isomerase and thioredoxin YP_004263768.1 KEGG: rle:pRL120486 hypothetical protein; SPTR: uncharacterized protein YP_004263769.1 KEGG: cyj:Cyan7822_0733 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3592) YP_004263770.1 KEGG: pfa:MAL13P1.311 exonuclease, SPTR: Exonuclease YP_004263771.1 KEGG: pmi:PMT9312_1116 DNA helicase/exodeoxyribonuclease V, gamma subunit; SPTR: DNA helicase/exodeoxyribonuclease V, gamma subunit YP_004263772.1 KEGG: rfr:Rfer_0177 hypothetical protein; SPTR: uncharacterized protein; PFAM: Zeta toxin YP_004263773.1 KEGG: tgo:TGME49_110670 glycogen phosphorylase, SPTR: Phosphorylase; PFAM: Protein of unknown function (DUF1444) YP_004263774.1 KEGG: ssl:SS1G_06396 hypothetical protein; SPTR: Predicted protein YP_004263775.1 KEGG: fjo:Fjoh_4073 hypothetical protein; SPTR: uncharacterized protein YP_004263776.1 InterPro IPR001736; KEGG: tpd:Teth39_2245 phospholipase D/transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase; PFAM: NgoFVII restriction endonuclease; Phospholipase D Active site motif YP_004263777.1 KEGG: tpd:Teth39_2245 phospholipase D/transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase YP_004263778.1 KEGG: cyu:UCYN_08200 hypothetical protein; SPTR: uncharacterized protein YP_004263779.1 InterPro IPR001434: IPR003367; KEGG: rbi:RB2501_06870 hypothetical protein; PFAM: Domain of unknown function DUF11; Thrombospondin, type 3-like repeat; SPTR: uncharacterized protein; TIGRFAM: Domain of unknown function DUF11 YP_004263780.1 InterPro IPR003663: IPR005828; KEGG: pdi:BDI_0784 D-xylose transporter XylE; PFAM: General substrate transporter; SPTR: D-xylose transporter; TIGRFAM: Sugar/inositol transporter; PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family YP_004263781.1 COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452: IPR012307: IPR001998; KEGG: fjo:Fjoh_2001 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase YP_004263782.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485; KEGG: fjo:Fjoh_2000 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Xylulokinase; SPTR: Carbohydrate kinase, FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_004263783.1 COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: fjo:Fjoh_1999 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family YP_004263784.1 KEGG: cpi:Cpin_2772 hypothetical protein; SPTR: uncharacterized protein YP_004263785.1 KEGG: gfo:GFO_2221 secreted protein; SPTR: Secreted protein YP_004263786.1 InterPro IPR003961; KEGG: lby:Lbys_2003 hypothetical protein; PFAM: Fibronectin, type III; SPTR: uncharacterized protein YP_004263787.1 KEGG: lby:Lbys_0384 hypothetical protein; SPTR: PKD domain containing protein YP_004263788.1 InterPro IPR022409: IPR000601; KEGG: coc:Coch_1259 PKD domain containing protein; PFAM: PKD domain; SMART: PKD/Chitinase domain; SPTR: surface layer protein B; PFAM: PKD domain YP_004263789.1 KEGG: mmh:Mmah_0322 S-layer-related duplication domain protein; SPTR: uncharacterized protein YP_004263790.1 KEGG: cpi:Cpin_2776 fibronectin type III domain protein; SPTR: Fibronectin type III domain protein YP_004263791.1 KEGG: aci:ACIAD0947 hypothetical protein; SPTR: uncharacterized protein YP_004263792.1 KEGG: sli:Slin_4549 hypothetical protein; SPTR: uncharacterized protein YP_004263793.1 KEGG: bau:BUAPTUC7_468 trigger factor; SPTR: Trigger factor YP_004263794.1 KEGG: edi:EDI_255900 hypothetical protein; SPTR: uncharacterized protein YP_004263795.1 KEGG: coc:Coch_1260 hypothetical protein; SPTR: uncharacterized protein YP_004263796.1 KEGG: dfe:Dfer_0413 conserved hypothetical protein, membrane; SPTR: uncharacterized protein YP_004263797.1 KEGG: fma:FMG_0837 DNA repair and genetic recombination protein; SPTR: DNA repair protein RecN YP_004263798.1 KEGG: dal:Dalk_2311 hypothetical protein; SPTR: uncharacterized protein YP_004263800.1 KEGG: coc:Coch_1247 hypothetical protein; SPTR: uncharacterized protein YP_004263801.1 InterPro IPR022441: IPR006626: IPR011459: IPR000772; KEGG: sli:Slin_2680 glycosyl hydrolase family 98 carbohydrate binding module; PFAM: Ricin B lectin; Domain of unknown function DUF1565; SPTR: Glycosyl hydrolase family 98 carbohydrate binding module; TIGRFAM: Parallel beta-helix repeat-2; PFAM: Ricin-type beta-trefoil lectin domain; TIGRFAM: parallel beta-helix repeat (two copies) YP_004263802.1 InterPro IPR006584: IPR005084; KEGG: caa:Caka_0492 Ig family protein; PFAM: Carbohydrate binding domain, family 6; SMART: Cellulose binding, type IV; SPTR: Ig family protein; PFAM: Carbohydrate binding module (family 6) YP_004263803.1 COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594: IPR011495; KEGG: fbc:FB2170_00610 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004263804.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: mbu:Mbur_2285 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator, LytR/AlgR family; PFAM: Response regulator receiver domain YP_004263805.1 InterPro IPR011659; KEGG: fbc:FB2170_15038 OmpA family protein; PFAM: WD40-like Beta Propeller; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat YP_004263806.1 InterPro IPR019861: IPR007730; KEGG: fbc:FB2170_15033 hypothetical protein; PFAM: Sporulation-related domain; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); Sporulation related domain; TIGRFAM: Bacteroidetes-specific membrane protein YP_004263807.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: rbi:RB2501_14244 DNA-binding response regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: DNA-binding response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_004263808.1 KEGG: rbi:RB2501_10297 hypothetical protein; SPTR: uncharacterized protein; PFAM: Serpentine type 7TM GPCR chemoreceptor Srv YP_004263809.1 KEGG: kko:Kkor_1791 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3307) YP_004263810.1 KEGG: kko:Kkor_1792 hypothetical protein; SPTR: uncharacterized protein YP_004263811.1 COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR003953: IPR006076; KEGG: fbc:FB2170_14148 uncharacterized FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Uncharacterized FAD-dependent dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_004263812.1 KEGG: fbc:FB2170_05180 hypothetical protein; SPTR: uncharacterized protein YP_004263813.1 KEGG: cat:CA2559_04675 hypothetical protein; SPTR: uncharacterized protein YP_004263814.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_04680 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain YP_004263815.1 KEGG: gfo:GFO_1546 hypothetical protein; SPTR: uncharacterized protein YP_004263816.1 COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: fbc:FB2170_08524 peptide methionine-R-sulfoxide reductase, MsrB protein (PilB protein); PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_004263817.1 COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: fbc:FB2170_08519 methionine-S-sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 1; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_004263818.1 KEGG: bfs:BF2934 hypothetical protein; SPTR: uncharacterized protein; PFAM: Acetyltransferase (GNAT) family YP_004263819.1 COGs: COG0397 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0061; InterPro IPR003846; KEGG: fbc:FB2170_08504 hypothetical protein; PFAM: Uncharacterised protein family UPF0061; SPTR: UPF0061 protein MED152_07440; PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_004263820.1 COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: gfo:GFO_0823 hypothetical protein; SPTR: manganese transport protein; PFAM: NADPH-dependent FMN reductase YP_004263821.1 COGs: COG2343 conserved hypothetical protein; InterPro IPR007361; KEGG: gfo:GFO_0283 hypothetical protein; PFAM: Protein of unknown function DUF427; SPTR: Protein containing DUF427; PFAM: Domain of unknown function (DUF427) YP_004263822.1 COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: fbc:FB2170_14103 OsmC-like protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; PFAM: OsmC-like protein YP_004263823.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR017806: IPR005532; KEGG: dfe:Dfer_1251 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: conserved hypothetical protein TIGR03440 YP_004263824.1 COGs: COG4301 conserved hypothetical protein; InterPro IPR019257; KEGG: dfe:Dfer_1252 hypothetical protein; PFAM: Protein of unknown function DUF2260; SPTR: uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase YP_004263825.1 COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fbc:FB2170_01507 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Oxidoreductase; PFAM: Aldo/keto reductase family YP_004263826.1 COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_14978 probable transmembrane protein; PFAM: Fatty acid hydroxylase; SPTR: Probable transmembrane protein; PFAM: Fatty acid hydroxylase superfamily YP_004263827.1 COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837; KEGG: rba:RB8016 sodium/calcium exchanger antiporter; PFAM: Sodium/calcium exchanger membrane region; SPTR: tRNA pseudouridine synthase A; PFAM: Sodium/calcium exchanger protein YP_004263828.1 KEGG: sna:Snas_0072 hypothetical protein; SPTR: Probable secreted protein YP_004263829.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_10596 aminopeptidase; PFAM: Peptidase M28; SPTR: aminopeptidase; PFAM: PA domain; Peptidase family M28 YP_004263830.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734: IPR003661: IPR003594: IPR001440; KEGG: fbc:FB2170_10591 sensor histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide repeat; SPTR: Sensor histidine kinase/response regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat YP_004263831.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734: IPR003661: IPR003594: IPR001440; KEGG: fbc:FB2170_10591 sensor histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide repeat; SPTR: Sensor histidine kinase/response regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_004263832.1 COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: fbc:FB2170_10586 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase YP_004263833.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_10581 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine beta-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_004263834.1 KEGG: rbi:RB2501_07210 hypothetical protein; SPTR: uncharacterized protein YP_004263835.1 COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: fbc:FB2170_10536 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB YP_004263836.1 COGs: COG2346 Truncated hemoglobins; KEGG: fbc:FB2170_03730 sec-independent protein translocase TatC; SPTR: uncharacterized protein YP_004263837.1 KEGG: fbc:FB2170_10516 hypothetical protein; SPTR: uncharacterized protein YP_004263838.1 COGs: COG5495 conserved hypothetical protein; InterPro IPR018931; KEGG: fps:FP1419 hypothetical protein; PFAM: Domain of unknown function DUF2520; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF2520) YP_004263839.1 COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023: IPR006549; KEGG: zpr:ZPR_2325 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_004263840.1 COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: cat:CA2559_12013 Maf protein; PFAM: Maf-like protein; SPTR: Maf-like protein FBALC1_07118; TIGRFAM: Maf-like protein; PFAM: Maf-like protein; TIGRFAM: MAF protein YP_004263841.1 KEGG: fbc:FB2170_10499 Maf-like protein; SPTR: Maf-like protein YP_004263842.1 KEGG: fbc:FB2170_10494 small-conductance mechanosensitive channel; SPTR: Small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel YP_004263843.1 COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: fps:FP1779 magnesium/cobalt transporter CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Divalent cation transport-related protein; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_004263844.1 InterPro IPR003737; KEGG: fbc:FB2170_10489 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase YP_004263845.1 KEGG: fbc:FB2170_10484 hypothetical protein; SPTR: uncharacterized protein YP_004263846.1 COGs: COG0591 Na+/proline symporter; InterPro IPR019900: IPR001734; KEGG: rbi:RB2501_13734 sodium iodide symporter; PFAM: Sodium/solute symporter; SPTR: Sodium iodide symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_004263847.1 KEGG: fbc:FB2170_10444 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2911) YP_004263848.1 KEGG: fbc:FB2170_10439 hypothetical protein; SPTR: uncharacterized protein YP_004263849.1 KEGG: fjo:Fjoh_0063 hypothetical protein; SPTR: uncharacterized protein YP_004263850.1 COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: fjo:Fjoh_0062 hypothetical protein; PFAM: ABC-1; SPTR: Probable protein kinase; PFAM: ABC1 family YP_004263851.1 COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: cat:CA2559_07816 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; SPTR: uncharacterized protein; PFAM: Flavin reductase like domain YP_004263852.1 COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cat:CA2559_05895 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2867); NmrA-like family YP_004263853.1 InterPro IPR019882; KEGG: cat:CA2559_07510 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03643; PFAM: Protein of unknown function (DUF2805); TIGRFAM: conserved hypothetical protein TIGR03643 YP_004263854.1 COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474: IPR020602; KEGG: dfe:Dfer_0468 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_004263855.1 KEGG: rbi:RB2501_14879 hypothetical protein; SPTR: uncharacterized protein YP_004263856.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_3742 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; PFAM: short chain dehydrogenase YP_004263857.1 COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: nve:NEMVE_v1g225874 hypothetical protein; PFAM: Glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase YP_004263858.1 KEGG: cat:CA2559_12608 hypothetical protein; SPTR: uncharacterized protein YP_004263859.1 InterPro IPR004307; KEGG: fbc:FB2170_07644 TspO- and MBR-like protein; PFAM: TspO/MBR-related protein; SPTR: uncharacterized protein; PFAM: TspO/MBR family YP_004263860.1 KEGG: cat:CA2559_12053 hypothetical protein; SPTR: uncharacterized protein YP_004263861.1 KEGG: lsg:lse_0560 sulfatase; SPTR: uncharacterized protein YP_004263862.1 COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750: IPR001986; KEGG: fbc:FB2170_10409 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004263863.1 KEGG: fbc:FB2170_10404 hypothetical protein; SPTR: uncharacterized protein YP_004263864.1 KEGG: fbc:FB2170_10399 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF493) YP_004263865.1 COGs: COG3911 ATPase; KEGG: gfo:GFO_1446 ATPase-like protein; SPTR: ATPase-like protein YP_004263866.1 COGs: COG0514 Superfamily II DNA helicase; InterPro IPR004589: IPR014001: IPR001650: IPR011545; KEGG: fbc:FB2170_10389 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_004263867.1 COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: fbc:FB2170_10384 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_004263868.1 COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_10379 DNA-binding protein HU-beta (NS1) (HU-1); PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein YP_004263869.1 COGs: COG1678 transcriptional regulator protein; InterPro IPR003774; KEGG: rbi:RB2501_13639 transcriptional regulator; PFAM: Protein of unknown function DUF179; SPTR: transcriptional regulator; PFAM: Uncharacterized ACR, COG1678 YP_004263870.1 COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: fbc:FB2170_10369 4-amino-4-deoxychorismate lyase, PFAM: Aminotransferase, class IV; SPTR: 4-amino-4-deoxychorismate lyase, ; PFAM: Aminotransferase class IV YP_004263871.1 KEGG: rbi:RB2501_13629 hypothetical protein; SPTR: uncharacterized protein YP_004263872.1 KEGG: zpr:ZPR_0431 hypothetical protein; SPTR: uncharacterized protein YP_004263873.1 KEGG: zpr:ZPR_0432 hypothetical protein; SPTR: uncharacterized protein YP_004263874.1 KEGG: zpr:ZPR_0433 PilT-like protein; SPTR: PilT-like protein YP_004263875.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746: IPR013766; KEGG: fbc:FB2170_14483 thioredoxin C-2; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_004263876.1 InterPro IPR008854; KEGG: gfo:GFO_2405 thiopurine S-methyltransferase; PFAM: Thiopurine S-methyltransferase; SPTR: uncharacterized protein; PFAM: Thiopurine S-methyltransferase (TPMT) YP_004263877.1 COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: fjo:Fjoh_4879 cytochrome bd ubiquinol oxidase, subunit I; PFAM: Cytochrome d ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I; PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_004263878.1 COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: fjo:Fjoh_4878 cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome d ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_004263879.1 InterPro IPR001387; KEGG: lby:Lbys_0583 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: DNA binding helix-turn helix protein; PFAM: Helix-turn-helix YP_004263880.1 COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006054: IPR006055: IPR000305: IPR013520; KEGG: fbc:FB2170_02150 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_004263881.1 COGs: COG3012 conserved hypothetical protein; KEGG: tcx:Tcr_1355 hypothetical protein; SPTR: uncharacterized protein YP_004263882.1 COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014: IPR001610: IPR003594: IPR013767: IPR 013655; KEGG: chu:CHU_3217 two-component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; SPTR: Two-component sensor histidine kinase; TIGRFAM: PAS; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_004263883.1 InterPro IPR001789; KEGG: zpr:ZPR_1891 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; PFAM: Response regulator receiver domain YP_004263884.1 COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: SAICAR synthetase; InterPro IPR001636; KEGG: zpr:ZPR_1837 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004263885.1 COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: fbc:FB2170_10201 phosphate starvation-inducible PhoH-like protein; PFAM: PhoH-like protein; SPTR: phosphate starvation-inducible PhoH-like protein; PFAM: PhoH-like protein YP_004263886.1 COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: fbc:FB2170_10196 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase YP_004263887.1 InterPro IPR007138; KEGG: cat:CA2559_08371 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase YP_004263888.1 InterPro IPR019860; KEGG: fjo:Fjoh_2722 hypothetical protein; SPTR: ABC transporter permease; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter permease GldF; PFAM: ABC-2 type transporter; TIGRFAM: gliding motility-associated ABC transporter permease GldF YP_004263889.1 COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019863: IPR019196; KEGG: rbi:RB2501_13569 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: uncharacterized protein; TIGRFAM: Gliding-associated ABC transporter substrate-binding GldG; PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated ABC transporter substrate-binding component GldG YP_004263890.1 COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001: IPR022634: IPR022637: IPR022635; KEGG: fbc:FB2170_10186 DNA polymerase III, beta chain; PFAM: DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_004263891.1 KEGG: fps:FP2423 hypothetical protein; SPTR: uncharacterized protein YP_004263892.1 KEGG: fbc:FB2170_10181 hypothetical protein; SPTR: uncharacterized protein YP_004263893.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469: IPR001375; KEGG: lby:Lbys_0480 dipeptidyl-peptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Peptidase S9, prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_004263894.1 COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520: IPR005225: IPR018948: IPR002917; KEGG: fjo:Fjoh_2707 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE YP_004263895.1 InterPro IPR010093; KEGG: sli:Slin_3280 DNA binding domain protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Bacteriophage Lambda NinG protein; TIGRFAM: DNA binding domain, excisionase family YP_004263896.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_1828 tyrosine type site-specific recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Tyrosine type site-specific recombinase; PFAM: Phage integrase family YP_004263897.1 KEGG: pcb:PC301176.00.0 hypothetical protein; SPTR: uncharacterized protein YP_004263898.1 InterPro IPR010093; KEGG: zpr:ZPR_1827 excisionase; SPTR: excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family YP_004263899.1 KEGG: fps:FP2174 hypothetical protein; SPTR: DNA binding domain, excisionase YP_004263900.1 InterPro IPR014907; KEGG: bth:BT_4619 hypothetical protein; PFAM: VirE N-terminal; SPTR: uncharacterized protein; PFAM: VirE N-terminal domain YP_004263901.1 KEGG: bth:BT_1638 hypothetical protein; SPTR: uncharacterized protein; PFAM: Primase C terminal 2 (PriCT-2) YP_004263902.1 InterPro IPR001387; KEGG: lby:Lbys_1062 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: uncharacterized protein; PFAM: Helix-turn-helix YP_004263903.1 KEGG: cat:CA2559_11643 hypothetical protein; SPTR: uncharacterized protein YP_004263904.1 InterPro IPR003165; KEGG: phe:Phep_1797 hypothetical protein; PFAM: Stem cell self-renewal protein Piwi; SMART: Stem cell self-renewal protein Piwi; SPTR: uncharacterized protein; PFAM: Piwi domain YP_004263905.1 KEGG: fbc:FB2170_10636 hypothetical protein; SPTR: uncharacterized protein YP_004263906.1 COGs: COG3696 silver efflux pump; InterPro IPR004763: IPR001036: IPR003423; KEGG: rbi:RB2501_04925 transport-related, membrane protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: transport-related, membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_004263907.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cat:CA2559_06450 lipoprotein; SPTR: lipoprotein; TIGRFAM: Secretion protein HlyD; TIGRFAM: RND family efflux transporter, MFP subunit YP_004263908.1 COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: gfo:GFO_0027 Fur family transcriptional regulator protein; SPTR: Ferric uptake regulation protein; PFAM: Ferric uptake regulator family YP_004263909.1 KEGG: chu:CHU_0726 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3703) YP_004263910.1 COGs: COG2217 Cation transport ATPase; InterProIPR006404: IPR006416: IPR001757: IPR008250: IPR 005834; KEGG: cat:CA2559_11668 cation-transporting ATPase, P-type, zinc-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: zinc-transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_004263911.1 KEGG: fps:FP2318 hypothetical protein; SPTR: uncharacterized protein YP_004263912.1 KEGG: fps:FP1552 hypothetical protein; SPTR: uncharacterized protein YP_004263913.1 KEGG: cat:CA2559_00400 hypothetical protein; SPTR: uncharacterized protein YP_004263914.1 InterPro IPR010093; KEGG: fjo:Fjoh_2706 DNA binding domain-containing protein; SPTR: Mobilizable transposon, tnpA protein; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family YP_004263915.1 KEGG: zpr:ZPR_1828 tyrosine type site-specific recombinase; SPTR: Mobilizable transposon, int protein YP_004263916.1 KEGG: lby:Lbys_1358 type I restrictioN-modification system, M subunit; SPTR: uncharacterized protein; PFAM: HsdM N-terminal domain YP_004263917.1 InterPro IPR014942; KEGG: gfo:GFO_0681 hypothetical protein; PFAM: Protein of unknown function DUF1814; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1814) YP_004263918.1 COGs: COG5340 transcriptional regulator protein; KEGG: gfo:GFO_0682 hypothetical protein; SPTR: uncharacterized protein YP_004263919.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: zpr:ZPR_1386 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_004263920.1 COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: swp:swp_1907 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family YP_004263921.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_10611 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Aldehyde dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family YP_004263922.1 COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: fbc:FB2170_10616 proline racemase; PFAM: Proline racemase; PRIAM: 4-hydroxyproline epimerase; SPTR: Proline racemase, ; PFAM: Proline racemase YP_004263923.1 COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_10621 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004263924.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fjo:Fjoh_4282 LytTR family two component transcriptional regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_004263925.1 COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_4283 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signaling protein without kinase domain; PFAM: Histidine kinase YP_004263926.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: vpa:VPA1108 NAD(P)H-flavin reductase; PFAM: Nitroreductase-like; SPTR: NAD(P)H-dependent flavin reductase; PFAM: Nitroreductase family YP_004263927.1 COGs: COG4097 ferric reductase; InterPro IPR013130: IPR008333: IPR001433; KEGG: lch:Lcho_2474 ferric reductase domain-containing protein; PFAM: Flavoprotein transmembrane component; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; SPTR: Ferric reductase domain protein transmembrane component domain; PFAM: Oxidoreductase FAD-binding domain; Ferric reductase like transmembrane component; Oxidoreductase NAD-binding domain YP_004263928.1 KEGG: phe:Phep_0532 hypothetical protein; SPTR: uncharacterized protein YP_004263929.1 KEGG: fjo:Fjoh_3290 hypothetical protein; SPTR: Hypothetical lipoprotein YP_004263930.1 KEGG: brm:Bmur_1026 hypothetical protein; SPTR: uncharacterized protein YP_004263931.1 COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein; PFAM: MORN variant; SPTR: Morn variant repeat protein; PFAM: MORN repeat variant YP_004263932.1 COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269; KEGG: dat:HRM2_08880 Dhs1; PFAM: tRNA-dihydrouridine synthase; SPTR: uncharacterized protein; PFAM: Dihydrouridine synthase (Dus) YP_004263933.1 KEGG: fba:FIC_02399 hypothetical protein; SPTR: uncharacterized protein YP_004263934.1 KEGG: btb:BMB171_C2151 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3112) YP_004263935.1 KEGG: pyo:PY05272 cysteine repeat modular protein 2 PbCRM2-related; SPTR: Possible SecDF protein-export membrane protein YP_004263936.1 KEGG: cai:Caci_3354 hypothetical protein; SPTR: uncharacterized protein YP_004263937.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR002772; KEGG: fjo:Fjoh_4963 glycoside hydrolase family 3 protein; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-glucosidase; SPTR: Candidate beta-glucosidase; Glycoside hydrolase family 3; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_004263938.1 COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000601: IPR000757; KEGG: gfo:GFO_3466 glycosy hydrolase; PFAM: Glycoside hydrolase, family 16; PKD domain; PRIAM: Glucan endo-1,3-beta-D-glucosidase; SPTR: Glycosyl hydrolase, family 16; PFAM: Glycosyl hydrolases family 16 YP_004263939.1 InterPro IPR022409: IPR000601; KEGG: fjo:Fjoh_2433 hypothetical protein; PFAM: PKD domain; SMART: PKD/Chitinase domain; SPTR: Glycosyl hydrolases family 16; PFAM: PKD domain YP_004263940.1 InterPro IPR012944; KEGG: fjo:Fjoh_2432 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family YP_004263941.1 InterPro IPR012910: IPR000531; KEGG: coc:Coch_1128 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_004263942.1 InterPro IPR000792: IPR011123; KEGG: fbc:FB2170_09231 hypothetical protein; PFAM: Two component regulator three Y; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: uncharacterized protein; PFAM: Y_Y_Y domain; Bacterial regulatory proteins, luxR family YP_004263943.1 KEGG: zpr:ZPR_1418 hypothetical protein; SPTR: uncharacterized protein YP_004263944.1 KEGG: cat:CA2559_08276 hypothetical protein; SPTR: uncharacterized protein YP_004263945.1 KEGG: gfo:GFO_1058 hypothetical protein; SPTR: uncharacterized protein YP_004263946.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665; KEGG: fjo:Fjoh_3476 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family YP_004263947.1 InterPro IPR019861; KEGG: fjo:Fjoh_3477 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein YP_004263948.1 KEGG: cat:CA2559_01025 hypothetical protein; SPTR: uncharacterized protein YP_004263949.1 COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: fbc:FB2170_06830 allergen V5/TPX-1 related protein; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1 related protein; PFAM: Cysteine-rich secretory protein family YP_004263950.1 COGs: COG2939 Carboxypeptidase C (cathepsin A); InterPro IPR001563; KEGG: rbi:RB2501_15419 serine carboxypeptidase; PFAM: Peptidase S10, serine carboxypeptidase; SPTR: Serine carboxypeptidase; PFAM: Serine carboxypeptidase YP_004263951.1 KEGG: fjo:Fjoh_2734 integral membrane sensor signal transduction histidine kinase; SPTR: Integral membrane sensor signal transduction histidine kinase YP_004263952.1 KEGG: fbc:FB2170_15798 pyruvate kinase; SPTR: Pyruvate kinase YP_004263953.1 COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: fjo:Fjoh_1252 PepSY-associated TM helix domain-containing protein; PFAM: PepSY-associated TM helix; SPTR: PepSY-associated TM helix domain protein YP_004263954.1 KEGG: fjo:Fjoh_1253 hypothetical protein; SPTR: uncharacterized protein YP_004263955.1 KEGG: fjo:Fjoh_1254 hypothetical protein; SPTR: uncharacterized protein YP_004263956.1 COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105: IPR012910: IPR000531; KEGG: cat:CA2559_07040 ferrichrome-iron receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_004263957.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: rbi:RB2501_07235 transcriptional regulator, Crp family protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Transcriptional regulator, Crp family protein; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_004263958.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279: IPR001763; KEGG: fbc:FB2170_02165 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; Rhodanese-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Metallo-beta-lactamase superfamily protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain YP_004263959.1 COGs: COG1988 membrane-bound metal-dependent hydrolase; InterPro IPR007404; KEGG: gfo:GFO_0063 transmembrane metal-dependent hydrolase; PFAM: Protein of unknown function DUF457, transmembrane; SPTR: Integral membrane protein; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) YP_004263960.1 InterPro IPR007272; KEGG: gfo:GFO_0978 YeeE/YedE domain-containing protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: Membrane protein containing YeeE/YedE domain; PFAM: YeeE/YedE family (DUF395) YP_004263961.1 InterPro IPR007272; KEGG: rbi:RB2501_07280 hypothetical protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: uncharacterized protein; PFAM: YeeE/YedE family (DUF395) YP_004263962.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469: IPR001375; KEGG: kko:Kkor_0716 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Dipeptidyl peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_004263963.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: fbc:FB2170_13296 oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_004263964.1 COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108; KEGG: fbc:FB2170_13301 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_004263965.1 COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: cat:CA2559_09523 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1015) YP_004263966.1 COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: fps:FP1913 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_004263967.1 COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006054: IPR006055: IPR013520: IPR000305; KEGG: fbc:FB2170_13316 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_004263968.1 InterPro IPR005821; KEGG: fbc:FB2170_13321 potassium channel protein; PFAM: Ion transport; SPTR: Potassium channel protein; PFAM: Ion transport protein YP_004263969.1 COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: cat:CA2559_09503 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA) YP_004263970.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fbc:FB2170_13336 two-component system, transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system, transcriptional regulatory protein; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_004263971.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594; KEGG: fbc:FB2170_13341 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_004263972.1 COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: fbc:FB2170_13346 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_004263973.1 InterPro IPR012505; KEGG: fbc:FB2170_13351 hypothetical protein; PFAM: YbbR-like; SPTR: uncharacterized protein; PFAM: YbbR-like protein YP_004263974.1 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13356 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2 YP_004263975.1 COGs: COG0623 Enoyl-ACP; KEGG: rbi:RB2501_16004 enoyl-ACP reductase; PRIAM: Enoyl-ACP reductase (NADH); SPTR: Enoyl-ACP reductase YP_004263976.1 COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604: IPR003395; KEGG: fbc:FB2170_13366 DNA repair protein; PFAM: RecF/RecN/SMC; SPTR: DNA repair protein; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_004263977.1 KEGG: fbc:FB2170_13371 hypothetical protein; SPTR: uncharacterized protein YP_004263978.1 COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252: IPR003382: IPR007085; KEGG: fbc:FB2170_13376 flavoprotein; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Flavoprotein; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_004263979.1 KEGG: fbc:FB2170_13381 hypothetical protein; SPTR: uncharacterized protein; PFAM: RNA polymerase Rpb6 YP_004263980.1 COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: fbc:FB2170_13386 conserved hypothetical lipoprotein; SPTR: Conserved hypothetical lipoprotein; TIGRFAM: Outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO YP_004263981.1 COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR005263: IPR002220; KEGG: fbc:FB2170_13391 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_004263982.1 KEGG: fbc:FB2170_13396 hypothetical protein; SPTR: uncharacterized protein YP_004263983.1 COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: NAD-dependent DNA ligase; InterProIPR001679: IPR013840: IPR003583: IPR001357: IPR 013839: IPR004150: IPR004149; KEGG: fbc:FB2170_13426 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_004263984.1 COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556: IPR019874: IPR007848; KEGG: fbc:FB2170_13431 protoporphyrinogen oxidase; PFAM: Methyltransferase small; SPTR: Protoporphyrinogen oxidase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_004263985.1 InterPro IPR000182; KEGG: fbc:FB2170_13436 histone acetyltransferase HPA2-related acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Histone acetyltransferase HPA2-related acetyltransferase; PFAM: Acetyltransferase (GNAT) family YP_004263986.1 COGs: COG0117 Pyrimidine deaminase; InterPro IPR004794: IPR002125: IPR002734; KEGG: fbc:FB2170_13453 riboflavin biosynthesis protein; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: riboflavin biosynthesis protein; TIGRFAM: Riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_004263987.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: fbc:FB2170_13458 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: haloacid dehalogenase-type hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_004263988.1 InterPro IPR000620; KEGG: fbc:FB2170_13463 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; PFAM: EamA-like transporter family YP_004263989.1 COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: fbc:FB2170_13468 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family YP_004263990.1 COGs: COG0824 thioesterase; InterPro IPR006684: IPR006683; KEGG: fbc:FB2170_13473 thioesterase; PFAM: Thioesterase superfamily; SPTR: Thioesterase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family