-- dump date 20111121_010844 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 536230000001 SEQ_END SEQ_END NC_012695.1 4098576 4098576 DR NC_012695.1; contig end 4098576..4098576 Burkholderia pseudomallei MSHR346 YP_002894730.1 CDS GBP346_A0001 NC_012695.1 <1 162 R chromosomal replication initiator protein DnaA complement(<1..162) Burkholderia pseudomallei MSHR346 7889218 YP_002894731.1 CDS rpmH NC_012695.1 608 742 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 608..742 Burkholderia pseudomallei MSHR346 7888819 YP_002894732.1 CDS GBP346_A0003 NC_012695.1 759 1226 D identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P 759..1226 Burkholderia pseudomallei MSHR346 7889731 YP_002894733.1 CDS GBP346_A0004 NC_012695.1 1306 1575 D identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 1306..1575 Burkholderia pseudomallei MSHR346 7890348 YP_002894734.1 CDS GBP346_A0005 NC_012695.1 1584 3260 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 1584..3260 Burkholderia pseudomallei MSHR346 7890678 YP_002894735.1 CDS GBP346_A0006 NC_012695.1 3417 3878 R hypothetical protein complement(3417..3878) Burkholderia pseudomallei MSHR346 7890729 YP_002894736.1 CDS GBP346_A0007 NC_012695.1 3708 3893 D hypothetical protein 3708..3893 Burkholderia pseudomallei MSHR346 7889335 YP_002894737.1 CDS GBP346_A0008 NC_012695.1 4015 4149 R hypothetical protein complement(4015..4149) Burkholderia pseudomallei MSHR346 7887433 YP_002894738.1 CDS trmE NC_012695.1 4174 5577 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4174..5577 Burkholderia pseudomallei MSHR346 7888773 YP_002894739.1 CDS GBP346_A0010 NC_012695.1 5746 6975 D identified by match to protein family HMM PF00589; integrase or site-specific recombinase 5746..6975 Burkholderia pseudomallei MSHR346 7887885 YP_002894740.1 CDS GBP346_A0011 NC_012695.1 7624 10476 R identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family complement(7624..10476) Burkholderia pseudomallei MSHR346 7890398 YP_002894741.1 CDS GBP346_A0012 NC_012695.1 10616 10957 R hypothetical protein complement(10616..10957) Burkholderia pseudomallei MSHR346 7888113 YP_002894742.1 CDS GBP346_A0013 NC_012695.1 10954 11211 R hypothetical protein complement(10954..11211) Burkholderia pseudomallei MSHR346 7888042 YP_002894743.1 CDS GBP346_A0014 NC_012695.1 11204 11380 R hypothetical protein complement(11204..11380) Burkholderia pseudomallei MSHR346 7887529 YP_002894744.1 CDS GBP346_A0015 NC_012695.1 11748 12227 R hypothetical protein complement(11748..12227) Burkholderia pseudomallei MSHR346 7887496 YP_002894745.1 CDS GBP346_A0016 NC_012695.1 12227 12367 R phage transcriptional regulator, AlpA complement(12227..12367) Burkholderia pseudomallei MSHR346 7888661 YP_002894746.1 CDS GBP346_A0017 NC_012695.1 12620 13141 R hypothetical protein complement(12620..13141) Burkholderia pseudomallei MSHR346 7888136 YP_002894747.1 CDS GBP346_A0018 NC_012695.1 13549 14523 R hypothetical protein complement(13549..14523) Burkholderia pseudomallei MSHR346 7888335 YP_002894748.1 CDS GBP346_A0019 NC_012695.1 14426 14539 D identified by glimmer; putative; hypothetical protein 14426..14539 Burkholderia pseudomallei MSHR346 7887869 YP_002894749.1 CDS GBP346_A0020 NC_012695.1 15586 15714 R identified by glimmer; putative; hypothetical protein complement(15586..15714) Burkholderia pseudomallei MSHR346 7890400 YP_002894750.1 CDS GBP346_A0021 NC_012695.1 15987 16127 R identified by glimmer; putative; hypothetical protein complement(15987..16127) Burkholderia pseudomallei MSHR346 7889999 YP_002894751.1 CDS GBP346_A0022 NC_012695.1 16189 16644 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; resolvase, N domain protein 16189..16644 Burkholderia pseudomallei MSHR346 7888654 YP_002894752.1 CDS GBP346_A0023 NC_012695.1 16791 16979 R identified by glimmer; putative; hypothetical protein complement(16791..16979) Burkholderia pseudomallei MSHR346 7890389 YP_002894753.1 CDS GBP346_A0024 NC_012695.1 17629 19329 R hypothetical protein complement(17629..19329) Burkholderia pseudomallei MSHR346 7887893 YP_002894754.1 CDS GBP346_A0025 NC_012695.1 20317 21051 R hypothetical protein complement(20317..21051) Burkholderia pseudomallei MSHR346 7888192 YP_002894755.1 CDS GBP346_A0026 NC_012695.1 21617 22774 D putative lipoprotein 21617..22774 Burkholderia pseudomallei MSHR346 7886878 YP_002894756.1 CDS GBP346_A0027 NC_012695.1 22837 22992 D hypothetical protein 22837..22992 Burkholderia pseudomallei MSHR346 7890653 YP_002894757.1 CDS GBP346_A0028 NC_012695.1 23340 23510 R hypothetical protein complement(23340..23510) Burkholderia pseudomallei MSHR346 7888923 YP_002894758.1 CDS speG NC_012695.1 23672 24232 D identified by match to protein family HMM PF00583; diamine N-acetyltransferase 23672..24232 Burkholderia pseudomallei MSHR346 7890240 YP_002894759.1 CDS GBP346_A0030 NC_012695.1 24244 24477 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 24244..24477 Burkholderia pseudomallei MSHR346 7888776 YP_002894760.1 CDS GBP346_A0031 NC_012695.1 24719 25066 D hypothetical protein 24719..25066 Burkholderia pseudomallei MSHR346 7890018 YP_002894761.1 CDS GBP346_A0032 NC_012695.1 25282 25836 D identified by match to protein family HMM PF07152; YaeQ protein 25282..25836 Burkholderia pseudomallei MSHR346 7888165 YP_002894762.1 CDS GBP346_A0033 NC_012695.1 26020 26436 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(26020..26436) Burkholderia pseudomallei MSHR346 7886940 YP_002894763.1 CDS GBP346_A0034 NC_012695.1 26838 27932 D identified by match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM PF02870; match to protein family HMM TIGR00589; regulatory protein ada (Regulatory protein of adaptative response) 26838..27932 Burkholderia pseudomallei MSHR346 7888023 YP_002894764.1 CDS alkA NC_012695.1 27929 28870 D identified by match to protein family HMM PF00730; match to protein family HMM PF06029; DNA-3-methyladenine glycosylase 2 27929..28870 Burkholderia pseudomallei MSHR346 7890922 YP_002894765.1 CDS GBP346_A0036 NC_012695.1 28871 29044 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 28871..29044 Burkholderia pseudomallei MSHR346 7890460 YP_002894766.1 CDS gshA_1 NC_012695.1 29083 30642 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 29083..30642 Burkholderia pseudomallei MSHR346 7889324 YP_002894767.1 CDS GBP346_A0038 NC_012695.1 30661 32109 R identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor complement(30661..32109) Burkholderia pseudomallei MSHR346 7887735 YP_002894768.1 CDS GBP346_A0039 NC_012695.1 32372 32920 R hypothetical protein complement(32372..32920) Burkholderia pseudomallei MSHR346 7887134 YP_002894769.1 CDS GBP346_A0040 NC_012695.1 33009 33455 R hypothetical protein complement(33009..33455) Burkholderia pseudomallei MSHR346 7887544 YP_002894770.1 CDS GBP346_A0041 NC_012695.1 33499 34068 R hypothetical protein complement(33499..34068) Burkholderia pseudomallei MSHR346 7890150 YP_002894771.1 CDS GBP346_A0042 NC_012695.1 34171 35139 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcription regulatory protein complement(34171..35139) Burkholderia pseudomallei MSHR346 7890284 YP_002894772.1 CDS potF_1 NC_012695.1 35213 36376 D identified by match to protein family HMM PF01547; putrescine ABC transporter, periplasmic putrescine-binding protein 35213..36376 Burkholderia pseudomallei MSHR346 7890778 YP_002894773.1 CDS GBP346_A0044 NC_012695.1 36405 37517 D identified by match to protein family HMM PF00850; histone deacetylase family protein 36405..37517 Burkholderia pseudomallei MSHR346 7887283 YP_002894774.1 CDS aguB NC_012695.1 37528 38403 D identified by match to protein family HMM PF00795; match to protein family HMM TIGR03381; N-carbamoylputrescine amidase 37528..38403 Burkholderia pseudomallei MSHR346 7889507 YP_002894775.1 CDS GBP346_A0046 NC_012695.1 38540 39004 R hypothetical protein complement(38540..39004) Burkholderia pseudomallei MSHR346 7890467 YP_002894776.1 CDS GBP346_A0047 NC_012695.1 38976 39533 R hypothetical protein complement(38976..39533) Burkholderia pseudomallei MSHR346 7889955 YP_002894777.1 CDS GBP346_A0048 NC_012695.1 39403 40494 D identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540; phage portal protein, pbsx family 39403..40494 Burkholderia pseudomallei MSHR346 7889344 YP_002894778.1 CDS GBP346_A0049 NC_012695.1 40568 40852 R hypothetical protein complement(40568..40852) Burkholderia pseudomallei MSHR346 7889271 YP_002894779.1 CDS GBP346_A0050 NC_012695.1 40849 41331 R hypothetical protein complement(40849..41331) Burkholderia pseudomallei MSHR346 7887152 YP_002894780.1 CDS GBP346_A0052 NC_012695.1 42699 42815 D hypothetical protein 42699..42815 Burkholderia pseudomallei MSHR346 7889188 YP_002894781.1 CDS GBP346_A0053 NC_012695.1 42871 43275 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 42871..43275 Burkholderia pseudomallei MSHR346 7888931 YP_002894782.1 CDS GBP346_A0054 NC_012695.1 43313 44182 D identified by match to protein family HMM PF01734; patatin 43313..44182 Burkholderia pseudomallei MSHR346 7889498 YP_002894783.1 CDS GBP346_A0055 NC_012695.1 44305 45321 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase complement(44305..45321) Burkholderia pseudomallei MSHR346 7888828 YP_002894784.1 CDS GBP346_A0056 NC_012695.1 45760 46815 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 45760..46815 Burkholderia pseudomallei MSHR346 7889844 YP_002894785.1 CDS GBP346_A0057 NC_012695.1 47037 49646 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(47037..49646) Burkholderia pseudomallei MSHR346 7888902 YP_002894786.1 CDS GBP346_A0058 NC_012695.1 49857 50228 R identified by match to protein family HMM PF00085; thioredoxin domain protein complement(49857..50228) Burkholderia pseudomallei MSHR346 7890710 YP_002894787.1 CDS GBP346_A0059 NC_012695.1 50288 51592 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(50288..51592) Burkholderia pseudomallei MSHR346 7890314 YP_002894788.1 CDS GBP346_A0060 NC_012695.1 51589 51708 R hypothetical protein complement(51589..51708) Burkholderia pseudomallei MSHR346 7890484 YP_002894789.1 CDS def_1 NC_012695.1 51671 52210 D identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 51671..52210 Burkholderia pseudomallei MSHR346 7889443 YP_002894790.1 CDS fmt NC_012695.1 52242 53225 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 52242..53225 Burkholderia pseudomallei MSHR346 7887812 YP_002894791.1 CDS GBP346_A0063 NC_012695.1 53241 53363 R hypothetical protein complement(53241..53363) Burkholderia pseudomallei MSHR346 7887070 YP_002894792.1 CDS GBP346_A0064 NC_012695.1 53346 53981 D identified by match to protein family HMM PF01810; translocator protein, LysE family 53346..53981 Burkholderia pseudomallei MSHR346 7888226 YP_002894793.1 CDS GBP346_A0065 NC_012695.1 54091 54948 D identified by match to protein family HMM PF01435; M48 family peptidase 54091..54948 Burkholderia pseudomallei MSHR346 7887185 YP_002894794.1 CDS GBP346_A0066 NC_012695.1 55113 55238 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; acetate permease 55113..55238 Burkholderia pseudomallei MSHR346 7887492 YP_002894795.1 CDS sun NC_012695.1 55406 56815 D identified by match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B 55406..56815 Burkholderia pseudomallei MSHR346 7888306 YP_002894796.1 CDS GBP346_A0068 NC_012695.1 56812 57402 D hypothetical protein 56812..57402 Burkholderia pseudomallei MSHR346 7890875 YP_002894797.1 CDS GBP346_A0069 NC_012695.1 57404 59812 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; PAS/PAC sensor signal transduction histidine kinase 57404..59812 Burkholderia pseudomallei MSHR346 7887050 YP_002894798.1 CDS GBP346_A0070 NC_012695.1 59813 60496 D identified by match to protein family HMM PF00072; match to protein family HMM PF02954; putative nitrogen assimilation regulatory protein NtrX 59813..60496 Burkholderia pseudomallei MSHR346 7887025 YP_002894799.1 CDS GBP346_A0072 NC_012695.1 60762 60983 D hypothetical protein 60762..60983 Burkholderia pseudomallei MSHR346 7889193 YP_002894800.1 CDS GBP346_A0073 NC_012695.1 60964 61698 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; ExsB protein 60964..61698 Burkholderia pseudomallei MSHR346 7890385 YP_002894801.1 CDS GBP346_A0074 NC_012695.1 61792 62424 D radical SAM domain protein 61792..62424 Burkholderia pseudomallei MSHR346 7888618 YP_002894802.1 CDS queD NC_012695.1 62444 62896 D identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; queuosine biosynthesis protein QueD 62444..62896 Burkholderia pseudomallei MSHR346 7887972 YP_002894803.1 CDS GBP346_A0076 NC_012695.1 62928 63080 D hypothetical protein 62928..63080 Burkholderia pseudomallei MSHR346 7890010 YP_002894804.1 CDS GBP346_A0077 NC_012695.1 63145 63285 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; HpcH/HpaI aldolase family protein 63145..63285 Burkholderia pseudomallei MSHR346 7887093 YP_002894805.1 CDS GBP346_A0078 NC_012695.1 63319 64104 D identified by match to protein family HMM PF03328; 2-dehydro-3-deoxyglucarate aldolase 63319..64104 Burkholderia pseudomallei MSHR346 7889849 YP_002894806.1 CDS GBP346_A0079 NC_012695.1 64101 64877 D identified by match to protein family HMM PF08238; Sel1 repeat protein 64101..64877 Burkholderia pseudomallei MSHR346 7889599 YP_002894807.1 CDS mrdB NC_012695.1 65143 66291 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA complement(65143..66291) Burkholderia pseudomallei MSHR346 7886730 YP_002894808.1 CDS mrdA NC_012695.1 66303 68714 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein 2 complement(66303..68714) Burkholderia pseudomallei MSHR346 7889637 YP_002894809.1 CDS GBP346_A0082 NC_012695.1 68719 68871 R identified by glimmer; putative; hypothetical protein complement(68719..68871) Burkholderia pseudomallei MSHR346 7890828 YP_002894810.1 CDS mreD NC_012695.1 68898 69410 R identified by match to protein family HMM PF04093; match to protein family HMM TIGR03426; rod shape-determining protein MreD complement(68898..69410) Burkholderia pseudomallei MSHR346 7887981 YP_002894811.1 CDS mreC NC_012695.1 69407 70480 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(69407..70480) Burkholderia pseudomallei MSHR346 7888883 YP_002894812.1 CDS GBP346_A0085 NC_012695.1 70600 71643 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(70600..71643) Burkholderia pseudomallei MSHR346 7887642 YP_002894813.1 CDS gatC NC_012695.1 72009 72308 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 72009..72308 Burkholderia pseudomallei MSHR346 7890168 YP_002894814.1 CDS gatA NC_012695.1 72421 73911 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 72421..73911 Burkholderia pseudomallei MSHR346 7888358 YP_002894815.1 CDS gatB NC_012695.1 73914 75386 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 73914..75386 Burkholderia pseudomallei MSHR346 7890598 YP_002894816.1 CDS GBP346_A0089 NC_012695.1 75513 76352 D identified by match to protein family HMM PF03976; polyphosphate:AMP phosphotransferase 75513..76352 Burkholderia pseudomallei MSHR346 7888082 YP_002894817.1 CDS xth_1 NC_012695.1 76385 77155 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 76385..77155 Burkholderia pseudomallei MSHR346 7889723 YP_002894818.1 CDS GBP346_A0091 NC_012695.1 77436 78500 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family complement(77436..78500) Burkholderia pseudomallei MSHR346 7887031 YP_002894819.1 CDS GBP346_A0092 NC_012695.1 78710 79654 D identified by match to protein family HMM PF00165; match to protein family HMM PF06719; AraC-type transcriptional regulator N-terminus domain protein 78710..79654 Burkholderia pseudomallei MSHR346 7887916 YP_002894820.1 CDS GBP346_A0093 NC_012695.1 80028 81080 R identified by match to protein family HMM PF01435; peptidase, M48 family complement(80028..81080) Burkholderia pseudomallei MSHR346 7889698 YP_002894821.1 CDS GBP346_A0094 NC_012695.1 81070 82383 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(81070..82383) Burkholderia pseudomallei MSHR346 7887165 YP_002894822.1 CDS metW NC_012695.1 82395 83009 R identified by match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM TIGR02081; methionine biosynthesis protein MetW complement(82395..83009) Burkholderia pseudomallei MSHR346 7890693 YP_002894823.1 CDS metX NC_012695.1 83006 84151 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(83006..84151) Burkholderia pseudomallei MSHR346 7887372 YP_002894824.1 CDS slmA NC_012695.1 84500 85192 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(84500..85192) Burkholderia pseudomallei MSHR346 7887439 YP_002894825.1 CDS GBP346_A0098 NC_012695.1 85159 85962 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01993; HAD-superfamily hydrolase complement(85159..85962) Burkholderia pseudomallei MSHR346 7890511 YP_002894826.1 CDS GBP346_A0099 NC_012695.1 85959 87014 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(85959..87014) Burkholderia pseudomallei MSHR346 7887065 YP_002894827.1 CDS GBP346_A0100 NC_012695.1 87035 87157 R identified by glimmer; putative; hypothetical protein complement(87035..87157) Burkholderia pseudomallei MSHR346 7888240 YP_002894828.1 CDS GBP346_A0101 NC_012695.1 87183 87434 D hypothetical protein 87183..87434 Burkholderia pseudomallei MSHR346 7890770 YP_002894829.1 CDS GBP346_A0102 NC_012695.1 87452 88732 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 87452..88732 Burkholderia pseudomallei MSHR346 7889286 YP_002894830.1 CDS GBP346_A0103 NC_012695.1 88752 89294 D identified by match to protein family HMM PF00072; match to protein family HMM PF02954; photosynthetic apparatus regulatory protein RegA 88752..89294 Burkholderia pseudomallei MSHR346 7889316 YP_002894831.1 CDS hslU NC_012695.1 89728 91071 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(89728..91071) Burkholderia pseudomallei MSHR346 7888073 YP_002894832.1 CDS hslV NC_012695.1 91081 91716 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(91081..91716) Burkholderia pseudomallei MSHR346 7887097 YP_002894833.1 CDS dksA NC_012695.1 91872 92288 R identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420; RNA polymerase-binding protein DksA complement(91872..92288) Burkholderia pseudomallei MSHR346 7887726 YP_002894834.1 CDS GBP346_A0107 NC_012695.1 92827 93903 R identified by match to protein family HMM PF02492; match to protein family HMM PF07683; cobalamin synthesis protein/P47K family protein complement(92827..93903) Burkholderia pseudomallei MSHR346 7888292 YP_002894835.1 CDS GBP346_A0108 NC_012695.1 94081 95358 R PUA domain protein complement(94081..95358) Burkholderia pseudomallei MSHR346 7886932 YP_002894836.1 CDS xerC NC_012695.1 95447 96379 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(95447..96379) Burkholderia pseudomallei MSHR346 7888157 YP_002894837.1 CDS GBP346_A0110 NC_012695.1 96410 97123 R identified by match to protein family HMM PF04340; hypothetical protein complement(96410..97123) Burkholderia pseudomallei MSHR346 7889945 YP_002894838.1 CDS dapF NC_012695.1 97171 98040 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(97171..98040) Burkholderia pseudomallei MSHR346 7889736 YP_002894839.1 CDS GBP346_A0112 NC_012695.1 98081 98965 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(98081..98965) Burkholderia pseudomallei MSHR346 7887482 YP_002894840.1 CDS metK NC_012695.1 99231 100418 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 99231..100418 Burkholderia pseudomallei MSHR346 7889756 YP_002894841.1 CDS GBP346_A0114 NC_012695.1 100585 100938 R hypothetical protein complement(100585..100938) Burkholderia pseudomallei MSHR346 7886885 YP_002894842.1 CDS GBP346_A0115 NC_012695.1 101155 102075 D identified by match to protein family HMM PF05721; phytanoyl-CoA dioxygenase 101155..102075 Burkholderia pseudomallei MSHR346 7890677 YP_002894843.1 CDS GBP346_A0116 NC_012695.1 102347 102553 R hypothetical protein complement(102347..102553) Burkholderia pseudomallei MSHR346 7887288 YP_002894844.1 CDS GBP346_A0117 NC_012695.1 102728 103771 D identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 102728..103771 Burkholderia pseudomallei MSHR346 7890369 YP_002894845.1 CDS GBP346_A0118 NC_012695.1 103814 103999 R hypothetical protein complement(103814..103999) Burkholderia pseudomallei MSHR346 7890666 YP_002894846.1 CDS GBP346_A0119 NC_012695.1 104267 105130 R identified by match to protein family HMM PF00892; permease of the drug/metabolite transporter complement(104267..105130) Burkholderia pseudomallei MSHR346 7890723 YP_002894847.1 CDS GBP346_A0120 NC_012695.1 105252 105488 R hypothetical protein complement(105252..105488) Burkholderia pseudomallei MSHR346 7889299 YP_002894848.1 CDS GBP346_A0121 NC_012695.1 105485 106774 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter complement(105485..106774) Burkholderia pseudomallei MSHR346 7890637 YP_002894849.1 CDS GBP346_A0122 NC_012695.1 106786 106917 D hypothetical protein 106786..106917 Burkholderia pseudomallei MSHR346 7887788 YP_002894850.1 CDS GBP346_A0123 NC_012695.1 106998 107129 R hypothetical protein complement(106998..107129) Burkholderia pseudomallei MSHR346 7888454 YP_002894851.1 CDS GBP346_A0124 NC_012695.1 107128 107340 D hypothetical protein 107128..107340 Burkholderia pseudomallei MSHR346 7890615 YP_002894852.1 CDS GBP346_A0125 NC_012695.1 107381 108412 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 107381..108412 Burkholderia pseudomallei MSHR346 7889340 YP_002894853.1 CDS GBP346_A0126 NC_012695.1 108683 108931 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(108683..108931) Burkholderia pseudomallei MSHR346 7887928 YP_002894854.1 CDS GBP346_A0127 NC_012695.1 109065 110483 R identified by match to protein family HMM PF00171; coniferyl aldehyde dehydrogenase complement(109065..110483) Burkholderia pseudomallei MSHR346 7888388 YP_002894855.1 CDS GBP346_A0128 NC_012695.1 110518 112197 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; putative acyl-CoA dehydrogenase complement(110518..112197) Burkholderia pseudomallei MSHR346 7890361 YP_002894856.1 CDS GBP346_A0129 NC_012695.1 112276 112401 R identified by glimmer; putative; hypothetical protein complement(112276..112401) Burkholderia pseudomallei MSHR346 7887841 YP_002894857.1 CDS GBP346_A0130 NC_012695.1 112431 114074 D identified by match to protein family HMM PF00732; match to protein family HMM PF05199; alcohol dehydrogenase (acceptor) 112431..114074 Burkholderia pseudomallei MSHR346 7888338 YP_002894858.1 CDS GBP346_A0131 NC_012695.1 114114 115490 R identified by match to protein family HMM PF02120; flagellar hook-length control protein FliK complement(114114..115490) Burkholderia pseudomallei MSHR346 7889872 YP_002894859.1 CDS fliJ NC_012695.1 115547 115999 R identified by match to protein family HMM PF02050; match to protein family HMM TIGR02473; flagellar export protein FliJ complement(115547..115999) Burkholderia pseudomallei MSHR346 7887924 YP_002894860.1 CDS fliI NC_012695.1 116005 117576 R identified by match to protein family HMM PF00006; match to protein family HMM TIGR01026; match to protein family HMM TIGR03496; flagellar protein export ATPase FliI complement(116005..117576) Burkholderia pseudomallei MSHR346 7887449 YP_002894861.1 CDS fliH NC_012695.1 117570 118250 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(117570..118250) Burkholderia pseudomallei MSHR346 7887989 YP_002894862.1 CDS fliG NC_012695.1 118243 119238 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(118243..119238) Burkholderia pseudomallei MSHR346 7889673 YP_002894863.1 CDS fliF NC_012695.1 119228 121024 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(119228..121024) Burkholderia pseudomallei MSHR346 7888106 YP_002894864.1 CDS fliE NC_012695.1 121272 121613 D identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205; flagellar hook-basal body complex protein FliE 121272..121613 Burkholderia pseudomallei MSHR346 7888241 YP_002894865.1 CDS fliS NC_012695.1 121681 122169 D identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208; flagellar protein FliS 121681..122169 Burkholderia pseudomallei MSHR346 7889452 YP_002894866.1 CDS GBP346_A0139 NC_012695.1 122166 122492 D hypothetical protein 122166..122492 Burkholderia pseudomallei MSHR346 7886912 YP_002894867.1 CDS GBP346_A0140 NC_012695.1 122602 124155 D hypothetical protein 122602..124155 Burkholderia pseudomallei MSHR346 7890854 YP_002894868.1 CDS GBP346_A0141 NC_012695.1 124152 124469 D flagellar biosynthetic protein FlhB domain protein 124152..124469 Burkholderia pseudomallei MSHR346 7887621 YP_002894869.1 CDS GBP346_A0142 NC_012695.1 124687 125406 D identified by match to protein family HMM PF03929; PepSY-associated TM helix family protein 124687..125406 Burkholderia pseudomallei MSHR346 7889708 YP_002894870.1 CDS GBP346_A0143 NC_012695.1 125494 126519 R identified by match to protein family HMM PF02625; carbon monoxide dehydrogenase accessory protein complement(125494..126519) Burkholderia pseudomallei MSHR346 7888058 YP_002894871.1 CDS GBP346_A0144 NC_012695.1 126718 128121 R identified by match to protein family HMM PF00324; amino acid permease complement(126718..128121) Burkholderia pseudomallei MSHR346 7890602 YP_002894872.1 CDS GBP346_A0145 NC_012695.1 128363 129019 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator, LuxR family complement(128363..129019) Burkholderia pseudomallei MSHR346 7888360 YP_002894873.1 CDS GBP346_A0146 NC_012695.1 129016 129864 R identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor kinase protein complement(129016..129864) Burkholderia pseudomallei MSHR346 7889891 YP_002894874.1 CDS fpr_1 NC_012695.1 130278 131048 R identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin--NADP reductase complement(130278..131048) Burkholderia pseudomallei MSHR346 7888497 YP_002894875.1 CDS GBP346_A0148 NC_012695.1 131261 131914 R identified by match to protein family HMM PF01810; LysE type translocator complement(131261..131914) Burkholderia pseudomallei MSHR346 7890163 YP_002894876.1 CDS GBP346_A0149 NC_012695.1 131980 132792 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase complement(131980..132792) Burkholderia pseudomallei MSHR346 7888754 YP_002894877.1 CDS GBP346_A0150 NC_012695.1 132799 133362 R hypothetical protein complement(132799..133362) Burkholderia pseudomallei MSHR346 7887750 YP_002894878.1 CDS GBP346_A0151 NC_012695.1 133459 133581 R identified by glimmer; putative; hypothetical protein complement(133459..133581) Burkholderia pseudomallei MSHR346 7888434 YP_002894879.1 CDS GBP346_A0152 NC_012695.1 133723 134703 D identified by match to protein family HMM PF00004; match to protein family HMM PF07728; ATP-dependent protease domain protein 133723..134703 Burkholderia pseudomallei MSHR346 7888620 YP_002894880.1 CDS GBP346_A0153 NC_012695.1 134775 135896 D identified by match to protein family HMM PF01266; FAD-dependent oxidoreductase 134775..135896 Burkholderia pseudomallei MSHR346 7889825 YP_002894881.1 CDS hip NC_012695.1 136031 136345 D identified by match to protein family HMM PF01355; high-potential iron-sulfur protein 136031..136345 Burkholderia pseudomallei MSHR346 7889233 YP_002894882.1 CDS GBP346_A0155 NC_012695.1 136576 137868 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 136576..137868 Burkholderia pseudomallei MSHR346 7890587 YP_002894883.1 CDS GBP346_A0157 NC_012695.1 137914 138093 D hypothetical protein 137914..138093 Burkholderia pseudomallei MSHR346 7890791 YP_002894884.1 CDS GBP346_A0156 NC_012695.1 138084 138236 R hypothetical protein complement(138084..138236) Burkholderia pseudomallei MSHR346 7887827 YP_002894885.1 CDS GBP346_A0158 NC_012695.1 138293 139921 D identified by match to protein family HMM PF00496; periplasmic dipeptide transport protein 138293..139921 Burkholderia pseudomallei MSHR346 7889836 YP_002894886.1 CDS GBP346_A0159 NC_012695.1 140033 141043 D identified by match to protein family HMM PF00528; probable D,D-dipeptide transport system permease protein DdpB 140033..141043 Burkholderia pseudomallei MSHR346 7887567 YP_002894887.1 CDS GBP346_A0160 NC_012695.1 141118 142059 D identified by match to protein family HMM PF00528; dipeptide ABC transporter, permease protein DppC 141118..142059 Burkholderia pseudomallei MSHR346 7890925 YP_002894888.1 CDS GBP346_A0161 NC_012695.1 142061 143053 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein OppD 142061..143053 Burkholderia pseudomallei MSHR346 7890501 YP_002894889.1 CDS dppF NC_012695.1 143050 144066 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 143050..144066 Burkholderia pseudomallei MSHR346 7888701 YP_002894890.1 CDS GBP346_A0163 NC_012695.1 144071 145207 D identified by match to protein family HMM PF07446; GumN family protein 144071..145207 Burkholderia pseudomallei MSHR346 7890158 YP_002894891.1 CDS GBP346_A0164 NC_012695.1 145696 146652 R identified by match to protein family HMM PF06166; membrane protein complement(145696..146652) Burkholderia pseudomallei MSHR346 7890274 YP_002894892.1 CDS GBP346_A0165 NC_012695.1 146649 147401 R identified by match to protein family HMM PF06149; membrane protein complement(146649..147401) Burkholderia pseudomallei MSHR346 7887103 YP_002894893.1 CDS GBP346_A0166 NC_012695.1 147612 148007 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 147612..148007 Burkholderia pseudomallei MSHR346 7888051 YP_002894894.1 CDS GBP346_A0167 NC_012695.1 148024 148788 R identified by match to protein family HMM PF03746; LamB/YcsF family protein complement(148024..148788) Burkholderia pseudomallei MSHR346 7887528 YP_002894895.1 CDS GBP346_A0168 NC_012695.1 148847 149926 R identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; allophanate hydrolase, subunit 2 complement(148847..149926) Burkholderia pseudomallei MSHR346 7890414 YP_002894896.1 CDS GBP346_A0169 NC_012695.1 149923 150693 R identified by match to protein family HMM PF02682; match to protein family HMM TIGR00370; hypothetical protein complement(149923..150693) Burkholderia pseudomallei MSHR346 7887698 YP_002894897.1 CDS GBP346_A0170 NC_012695.1 150729 151241 D identified by match to protein family HMM PF01047; transcriptional regulator 150729..151241 Burkholderia pseudomallei MSHR346 7889305 YP_002894898.1 CDS GBP346_A0171 NC_012695.1 151481 152077 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase complement(151481..152077) Burkholderia pseudomallei MSHR346 7888118 YP_002894899.1 CDS GBP346_A0172 NC_012695.1 152099 154054 D identified by match to protein family HMM PF01464; transglycosylase, SLT family 152099..154054 Burkholderia pseudomallei MSHR346 7890757 YP_002894900.1 CDS GBP346_A0173 NC_012695.1 154176 155135 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 154176..155135 Burkholderia pseudomallei MSHR346 7886886 YP_002894901.1 CDS GBP346_A0174 NC_012695.1 155199 155846 D identified by match to protein family HMM PF02798; glutathione S-transferase domain protein 155199..155846 Burkholderia pseudomallei MSHR346 7887259 YP_002894902.1 CDS cca NC_012695.1 155843 157084 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 155843..157084 Burkholderia pseudomallei MSHR346 7888857 YP_002894903.1 CDS GBP346_A0176 NC_012695.1 157279 157527 R putative brain expressed, associated with Nedd4 isoform 1 complement(157279..157527) Burkholderia pseudomallei MSHR346 7890473 YP_002894904.1 CDS GBP346_A0177 NC_012695.1 157746 157967 R RebB protein complement(157746..157967) Burkholderia pseudomallei MSHR346 7889516 YP_002894905.1 CDS GBP346_A0178 NC_012695.1 158070 158303 D identified by glimmer; putative; hypothetical protein 158070..158303 Burkholderia pseudomallei MSHR346 7887743 YP_002894906.1 CDS GBP346_A0179 NC_012695.1 158446 158940 R identified by match to protein family HMM PF05130; flagellar protein, FlgN family complement(158446..158940) Burkholderia pseudomallei MSHR346 7887692 YP_002894907.1 CDS GBP346_A0180 NC_012695.1 158966 159310 R identified by match to protein family HMM PF04316; anti-sigma-28 factor, FlgM complement(158966..159310) Burkholderia pseudomallei MSHR346 7889320 YP_002894908.1 CDS flgA NC_012695.1 159414 160943 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(159414..160943) Burkholderia pseudomallei MSHR346 7889225 YP_002894909.1 CDS flgB NC_012695.1 161215 161706 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 161215..161706 Burkholderia pseudomallei MSHR346 7889927 YP_002894910.1 CDS flgC NC_012695.1 161790 162215 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 161790..162215 Burkholderia pseudomallei MSHR346 7887641 YP_002894911.1 CDS flgD NC_012695.1 162269 163111 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 162269..163111 Burkholderia pseudomallei MSHR346 7890785 YP_002894912.1 CDS flgE NC_012695.1 163139 164380 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 163139..164380 Burkholderia pseudomallei MSHR346 7890510 YP_002894913.1 CDS flgF NC_012695.1 164407 165168 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 164407..165168 Burkholderia pseudomallei MSHR346 7890175 YP_002894914.1 CDS flgG NC_012695.1 165202 165990 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 165202..165990 Burkholderia pseudomallei MSHR346 7887422 YP_002894915.1 CDS flgH NC_012695.1 166011 166733 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein 166011..166733 Burkholderia pseudomallei MSHR346 7888526 YP_002894916.1 CDS flgI NC_012695.1 166727 167932 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 166727..167932 Burkholderia pseudomallei MSHR346 7887180 YP_002894917.1 CDS flgJ NC_012695.1 167933 168868 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 167933..168868 Burkholderia pseudomallei MSHR346 7889699 YP_002894918.1 CDS GBP346_A0191 NC_012695.1 169084 169842 D identified by match to protein family HMM PF07238; match to protein family HMM PF07317; YcgR protein superfamily 169084..169842 Burkholderia pseudomallei MSHR346 7890351 YP_002894919.1 CDS flgK NC_012695.1 169907 172051 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 169907..172051 Burkholderia pseudomallei MSHR346 7887077 YP_002894920.1 CDS flgL NC_012695.1 172067 173299 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 172067..173299 Burkholderia pseudomallei MSHR346 7890436 YP_002894921.1 CDS GBP346_A0194 NC_012695.1 173417 173608 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 173417..173608 Burkholderia pseudomallei MSHR346 7889404 YP_002894922.1 CDS GBP346_A0195 NC_012695.1 173667 174974 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil-xanthine permease 173667..174974 Burkholderia pseudomallei MSHR346 7890502 YP_002894923.1 CDS GBP346_A0196 NC_012695.1 174971 175168 D hypothetical protein 174971..175168 Burkholderia pseudomallei MSHR346 7890532 YP_002894924.1 CDS GBP346_A0197 NC_012695.1 175184 176065 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(175184..176065) Burkholderia pseudomallei MSHR346 7890955 YP_002894925.1 CDS GBP346_A0198 NC_012695.1 176163 176762 D identified by match to protein family HMM PF02417; chromate transporter 176163..176762 Burkholderia pseudomallei MSHR346 7888941 YP_002894926.1 CDS GBP346_A0199 NC_012695.1 176759 177289 D identified by match to protein family HMM PF02417; chromate transporter family 176759..177289 Burkholderia pseudomallei MSHR346 7887327 YP_002894927.1 CDS GBP346_A0200 NC_012695.1 177277 177435 D identified by glimmer; putative; hypothetical protein 177277..177435 Burkholderia pseudomallei MSHR346 7886844 YP_002894928.1 CDS GBP346_A0201 NC_012695.1 177620 177958 R hypothetical protein complement(177620..177958) Burkholderia pseudomallei MSHR346 7889114 YP_002894929.1 CDS GBP346_A0202 NC_012695.1 178072 178416 D identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686; putative alkylphosphonate utilization operon protein PhnA 178072..178416 Burkholderia pseudomallei MSHR346 7886711 YP_002894930.1 CDS GBP346_A0203 NC_012695.1 178434 179174 D identified by match to protein family HMM PF06912; hypothetical protein 178434..179174 Burkholderia pseudomallei MSHR346 7887551 YP_002894931.1 CDS GBP346_A0204 NC_012695.1 179271 179456 R hypothetical protein complement(179271..179456) Burkholderia pseudomallei MSHR346 7889527 YP_002894932.1 CDS GBP346_A0205 NC_012695.1 179413 179571 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 179413..179571 Burkholderia pseudomallei MSHR346 7887101 YP_002894933.1 CDS GBP346_A0206 NC_012695.1 179715 180848 D identified by match to protein family HMM PF00267; outer membrane porin 179715..180848 Burkholderia pseudomallei MSHR346 7889783 YP_002894934.1 CDS GBP346_A0207 NC_012695.1 181006 181827 R hypothetical protein complement(181006..181827) Burkholderia pseudomallei MSHR346 7890140 YP_002894935.1 CDS GBP346_A0208 NC_012695.1 181887 182450 R putative lipoprotein complement(181887..182450) Burkholderia pseudomallei MSHR346 7886864 YP_002894936.1 CDS GBP346_A0209 NC_012695.1 182702 182860 R hypothetical protein complement(182702..182860) Burkholderia pseudomallei MSHR346 7888727 YP_002894937.1 CDS GBP346_A0210 NC_012695.1 182818 183798 R identified by match to protein family HMM TIGR03476; membrane protein complement(182818..183798) Burkholderia pseudomallei MSHR346 7887361 YP_002894938.1 CDS GBP346_A0211 NC_012695.1 183795 183914 R hypothetical protein complement(183795..183914) Burkholderia pseudomallei MSHR346 7889528 YP_002894939.1 CDS hpnI_1 NC_012695.1 183881 185149 R identified by match to protein family HMM TIGR03472; hopanoid biosynthesis associated glycosyl transferase protein HpnI complement(183881..185149) Burkholderia pseudomallei MSHR346 7887770 YP_002894940.1 CDS GBP346_A0213 NC_012695.1 185531 187045 R identified by match to protein family HMM PF04966; carbohydrate porin, OprB family complement(185531..187045) Burkholderia pseudomallei MSHR346 7890869 YP_002894941.1 CDS GBP346_A0214 NC_012695.1 187147 187407 R hypothetical protein complement(187147..187407) Burkholderia pseudomallei MSHR346 7887835 YP_002894942.1 CDS GBP346_A0215 NC_012695.1 187589 187912 R hypothetical protein complement(187589..187912) Burkholderia pseudomallei MSHR346 7890809 YP_002894943.1 CDS GBP346_A0216 NC_012695.1 187933 188382 R identified by glimmer; putative; hypothetical protein complement(187933..188382) Burkholderia pseudomallei MSHR346 7889513 YP_002894944.1 CDS GBP346_A0217 NC_012695.1 188440 188580 D hypothetical protein 188440..188580 Burkholderia pseudomallei MSHR346 7888969 YP_002894945.1 CDS GBP346_A0218 NC_012695.1 188600 190375 D identified by match to protein family HMM PF01566; metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 188600..190375 Burkholderia pseudomallei MSHR346 7887688 YP_002894946.1 CDS GBP346_A0219 NC_012695.1 190503 190670 D hypothetical protein 190503..190670 Burkholderia pseudomallei MSHR346 7886812 YP_002894947.1 CDS GBP346_A0220 NC_012695.1 190708 190896 R hypothetical protein complement(190708..190896) Burkholderia pseudomallei MSHR346 7886735 YP_002894948.1 CDS GBP346_A0221 NC_012695.1 190850 191158 D hypothetical protein 190850..191158 Burkholderia pseudomallei MSHR346 7888540 YP_002894949.1 CDS gor NC_012695.1 191355 192716 D identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01424; glutathione-disulfide reductase 191355..192716 Burkholderia pseudomallei MSHR346 7886738 YP_002894950.1 CDS GBP346_A0223 NC_012695.1 193030 193266 R hypothetical protein complement(193030..193266) Burkholderia pseudomallei MSHR346 7890490 YP_002894951.1 CDS argG_1 NC_012695.1 193336 194676 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 193336..194676 Burkholderia pseudomallei MSHR346 7887172 YP_002894952.1 CDS GBP346_A0225 NC_012695.1 194802 195473 D hypothetical protein 194802..195473 Burkholderia pseudomallei MSHR346 7889264 YP_002894953.1 CDS GBP346_A0226 NC_012695.1 195581 196288 D hypothetical protein 195581..196288 Burkholderia pseudomallei MSHR346 7887270 YP_002894954.1 CDS GBP346_A0227 NC_012695.1 196301 196462 D identified by glimmer; putative; hypothetical protein 196301..196462 Burkholderia pseudomallei MSHR346 7889077 YP_002894955.1 CDS GBP346_A0228 NC_012695.1 196523 196858 D identified by match to protein family HMM PF00403; heavy-metal-associated domain protein 196523..196858 Burkholderia pseudomallei MSHR346 7889644 YP_002894956.1 CDS GBP346_A0229 NC_012695.1 197195 197383 D hypothetical protein 197195..197383 Burkholderia pseudomallei MSHR346 7890016 YP_002894957.1 CDS GBP346_A0230 NC_012695.1 197429 199957 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase complement(197429..199957) Burkholderia pseudomallei MSHR346 7888939 YP_002894958.1 CDS GBP346_A0231 NC_012695.1 199964 200206 D hypothetical protein 199964..200206 Burkholderia pseudomallei MSHR346 7889394 YP_002894959.1 CDS GBP346_A0232 NC_012695.1 200506 201180 D identified by match to protein family HMM PF04011; LemA family protein 200506..201180 Burkholderia pseudomallei MSHR346 7888144 YP_002894960.1 CDS GBP346_A0233 NC_012695.1 201177 202025 D identified by match to protein family HMM PF04536; methanol dehydrogenase-like protein 201177..202025 Burkholderia pseudomallei MSHR346 7889108 YP_002894961.1 CDS GBP346_A0234 NC_012695.1 202025 202522 D identified by match to protein family HMM PF04536; hypothetical protein 202025..202522 Burkholderia pseudomallei MSHR346 7888539 YP_002894962.1 CDS GBP346_A0236 NC_012695.1 202556 203032 D putative lipoprotein 202556..203032 Burkholderia pseudomallei MSHR346 7890909 YP_002894963.1 CDS GBP346_A0235 NC_012695.1 203029 203178 R identified by glimmer; putative; hypothetical protein complement(203029..203178) Burkholderia pseudomallei MSHR346 7890855 YP_002894964.1 CDS GBP346_A0237 NC_012695.1 203131 204432 D identified by match to protein family HMM PF02321; outer membrane efflux protein 203131..204432 Burkholderia pseudomallei MSHR346 7889619 YP_002894965.1 CDS GBP346_A0238 NC_012695.1 204443 206014 D identified by match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 204443..206014 Burkholderia pseudomallei MSHR346 7889622 YP_002894966.1 CDS GBP346_A0239 NC_012695.1 206011 209223 D identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; cation efflux system protein CusA 206011..209223 Burkholderia pseudomallei MSHR346 7889042 YP_002894967.1 CDS GBP346_A0240 NC_012695.1 209220 209561 D efflux transporter, RND family, MFP subunit 209220..209561 Burkholderia pseudomallei MSHR346 7889378 YP_002894968.1 CDS GBP346_A0241 NC_012695.1 209565 209729 D hypothetical protein 209565..209729 Burkholderia pseudomallei MSHR346 7888977 YP_002894969.1 CDS GBP346_A0242 NC_012695.1 209843 210208 D identified by match to protein family HMM PF01382; avidin family protein 209843..210208 Burkholderia pseudomallei MSHR346 7889120 YP_002894970.1 CDS glmS_1 NC_012695.1 210283 212115 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(210283..212115) Burkholderia pseudomallei MSHR346 7887124 YP_002894971.1 CDS glmU NC_012695.1 212179 213540 R identified by match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM PF01128; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase complement(212179..213540) Burkholderia pseudomallei MSHR346 7890883 YP_002894972.1 CDS GBP346_A0245 NC_012695.1 213579 213875 R hypothetical protein complement(213579..213875) Burkholderia pseudomallei MSHR346 7888918 YP_002894973.1 CDS GBP346_A0246 NC_012695.1 214109 215104 R identified by match to protein family HMM PF01171; PP-loop family protein complement(214109..215104) Burkholderia pseudomallei MSHR346 7888577 YP_002894974.1 CDS folB_1 NC_012695.1 215101 215505 R identified by match to protein family HMM TIGR00526; dihydroneopterin aldolase complement(215101..215505) Burkholderia pseudomallei MSHR346 7887512 YP_002894975.1 CDS GBP346_A0248 NC_012695.1 215587 216468 R short-chain dehydrogenase/reductase SDR complement(215587..216468) Burkholderia pseudomallei MSHR346 7888656 YP_002894976.1 CDS GBP346_A0249 NC_012695.1 216536 217726 D identified by match to protein family HMM PF02636; hypothetical protein 216536..217726 Burkholderia pseudomallei MSHR346 7889956 YP_002894977.1 CDS GBP346_A0250 NC_012695.1 217744 217938 D hypothetical protein 217744..217938 Burkholderia pseudomallei MSHR346 7890094 YP_002894978.1 CDS GBP346_A0251 NC_012695.1 217935 218093 D hypothetical protein 217935..218093 Burkholderia pseudomallei MSHR346 7888450 YP_002894979.1 CDS GBP346_A0252 NC_012695.1 218227 218451 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(218227..218451) Burkholderia pseudomallei MSHR346 7888167 YP_002894980.1 CDS GBP346_A0253 NC_012695.1 218763 219671 R identified by match to protein family HMM PF00294; PfkB domain protein complement(218763..219671) Burkholderia pseudomallei MSHR346 7886873 YP_002894981.1 CDS GBP346_A0254 NC_012695.1 219668 221146 R identified by match to protein family HMM PF07221; N-acylglucosamine 2-epimerase complement(219668..221146) Burkholderia pseudomallei MSHR346 7890819 YP_002894982.1 CDS GBP346_A0255 NC_012695.1 221143 222162 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family complement(221143..222162) Burkholderia pseudomallei MSHR346 7887614 YP_002894983.1 CDS GBP346_A0256 NC_012695.1 222333 223892 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(222333..223892) Burkholderia pseudomallei MSHR346 7889514 YP_002894984.1 CDS GBP346_A0257 NC_012695.1 223955 224479 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(223955..224479) Burkholderia pseudomallei MSHR346 7887838 YP_002894985.1 CDS GBP346_A0258 NC_012695.1 224536 225576 R identified by match to protein family HMM PF01758; sodium/bile acid symporter family protein complement(224536..225576) Burkholderia pseudomallei MSHR346 7887092 YP_002894986.1 CDS GBP346_A0260 NC_012695.1 225959 226435 D hypothetical protein 225959..226435 Burkholderia pseudomallei MSHR346 7890273 YP_002894987.1 CDS GBP346_A0259 NC_012695.1 226396 226560 R hypothetical protein complement(226396..226560) Burkholderia pseudomallei MSHR346 7888346 YP_002894988.1 CDS GBP346_A0261 NC_012695.1 226518 226661 R hypothetical protein complement(226518..226661) Burkholderia pseudomallei MSHR346 7889312 YP_002894989.1 CDS GBP346_A0262 NC_012695.1 226825 227901 D identified by match to protein family HMM PF00267; outer membrane porin 226825..227901 Burkholderia pseudomallei MSHR346 7890494 YP_002894990.1 CDS GBP346_A0263 NC_012695.1 227935 229023 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 227935..229023 Burkholderia pseudomallei MSHR346 7890687 YP_002894991.1 CDS GBP346_A0264 NC_012695.1 229129 229440 D identified by glimmer; putative; hypothetical protein 229129..229440 Burkholderia pseudomallei MSHR346 7888815 YP_002894992.1 CDS GBP346_A0265 NC_012695.1 229463 230422 R identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family complement(229463..230422) Burkholderia pseudomallei MSHR346 7890066 YP_002894993.1 CDS GBP346_A0266 NC_012695.1 230459 230623 D hypothetical protein 230459..230623 Burkholderia pseudomallei MSHR346 7889739 YP_002894994.1 CDS GBP346_A0267 NC_012695.1 230718 231611 D identified by match to protein family HMM PF00561; haloacetate dehalogenase H-1 230718..231611 Burkholderia pseudomallei MSHR346 7890356 YP_002894995.1 CDS GBP346_A0268 NC_012695.1 231693 232181 R identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family complement(231693..232181) Burkholderia pseudomallei MSHR346 7890772 YP_002894996.1 CDS GBP346_A0269 NC_012695.1 232293 233207 D identified by match to protein family HMM PF00892; hypothetical protein 232293..233207 Burkholderia pseudomallei MSHR346 7887287 YP_002894997.1 CDS GBP346_A0270 NC_012695.1 233494 233817 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06945; YbaK/prolyl-tRNA synthetase associated region complement(233494..233817) Burkholderia pseudomallei MSHR346 7890715 YP_002894998.1 CDS GBP346_A0271 NC_012695.1 233823 234329 R identified by match to protein family HMM PF04073; YbaK complement(233823..234329) Burkholderia pseudomallei MSHR346 7886890 YP_002894999.1 CDS GBP346_A0272 NC_012695.1 234385 235320 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(234385..235320) Burkholderia pseudomallei MSHR346 7890221 YP_002895000.1 CDS GBP346_A0273 NC_012695.1 235406 236347 R identified by match to protein family HMM PF02826; putative 2-hydroxyacid dehydrogenase GhrA complement(235406..236347) Burkholderia pseudomallei MSHR346 7890495 YP_002895001.1 CDS GBP346_A0274 NC_012695.1 236352 236789 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(236352..236789) Burkholderia pseudomallei MSHR346 7889655 YP_002895002.1 CDS GBP346_A0275 NC_012695.1 236814 236948 R identified by glimmer; putative; hypothetical protein complement(236814..236948) Burkholderia pseudomallei MSHR346 7888997 YP_002895003.1 CDS GBP346_A0276 NC_012695.1 236939 237568 D identified by match to protein family HMM PF06821; putative hydrolase 236939..237568 Burkholderia pseudomallei MSHR346 7889815 YP_002895004.1 CDS GBP346_A0277 NC_012695.1 237597 238007 R identified by match to protein family HMM PF00293; ADP-ribose pyrophosphatase complement(237597..238007) Burkholderia pseudomallei MSHR346 7887940 YP_002895005.1 CDS GBP346_A0279 NC_012695.1 238048 238161 D hypothetical protein 238048..238161 Burkholderia pseudomallei MSHR346 7888239 YP_002895006.1 CDS GBP346_A0278 NC_012695.1 238151 240268 R identified by match to protein family HMM PF04185; match to protein family HMM PF05506; match to protein family HMM TIGR03396; phospholipase C, phosphocholine-specific complement(238151..240268) Burkholderia pseudomallei MSHR346 7890214 YP_002895007.1 CDS GBP346_A0280 NC_012695.1 240315 240611 R putative lipoprotein complement(240315..240611) Burkholderia pseudomallei MSHR346 7889834 YP_002895008.1 CDS GBP346_A0281 NC_012695.1 240849 241307 R identified by match to protein family HMM PF01037; leucine-responsive regulatory protein complement(240849..241307) Burkholderia pseudomallei MSHR346 7889909 YP_002895009.1 CDS GBP346_A0282 NC_012695.1 241432 242160 D identified by match to protein family HMM PF03591; AzlC family protein 241432..242160 Burkholderia pseudomallei MSHR346 7887347 YP_002895010.1 CDS GBP346_A0283 NC_012695.1 242157 242459 D identified by match to protein family HMM PF05437; AzlD family protein 242157..242459 Burkholderia pseudomallei MSHR346 7889817 YP_002895011.1 CDS GBP346_A0284 NC_012695.1 242561 243289 D identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 242561..243289 Burkholderia pseudomallei MSHR346 7890193 YP_002895012.1 CDS GBP346_A0285 NC_012695.1 243653 244246 R identified by match to protein family HMM PF02630; SCO1/SenC family protein complement(243653..244246) Burkholderia pseudomallei MSHR346 7887375 YP_002895013.1 CDS GBP346_A0286 NC_012695.1 244274 247117 R identified by match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; kelch domain protein complement(244274..247117) Burkholderia pseudomallei MSHR346 7886897 YP_002895014.1 CDS GBP346_A0287 NC_012695.1 247491 247709 D hypothetical protein 247491..247709 Burkholderia pseudomallei MSHR346 7890205 YP_002895015.1 CDS GBP346_A0288 NC_012695.1 247766 248011 D hypothetical protein 247766..248011 Burkholderia pseudomallei MSHR346 7888879 YP_002895016.1 CDS dapA_1 NC_012695.1 248072 248968 R identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase complement(248072..248968) Burkholderia pseudomallei MSHR346 7888495 YP_002895017.1 CDS GBP346_A0290 NC_012695.1 249099 249281 R hypothetical protein complement(249099..249281) Burkholderia pseudomallei MSHR346 7887887 YP_002895018.1 CDS GBP346_A0291 NC_012695.1 249238 249747 R putative insertion element protein complement(249238..249747) Burkholderia pseudomallei MSHR346 7889542 YP_002895019.1 CDS GBP346_A0292 NC_012695.1 250142 250708 R hypothetical protein complement(250142..250708) Burkholderia pseudomallei MSHR346 7888425 YP_002895020.1 CDS GBP346_A0293 NC_012695.1 251061 251618 D hypothetical protein 251061..251618 Burkholderia pseudomallei MSHR346 7887166 YP_002895021.1 CDS GBP346_A0294 NC_012695.1 251857 251991 R hypothetical protein complement(251857..251991) Burkholderia pseudomallei MSHR346 7888347 YP_002895022.1 CDS GBP346_A0295 NC_012695.1 252088 252744 D identified by match to protein family HMM PF00158; Fis family regulatory protein 252088..252744 Burkholderia pseudomallei MSHR346 7890571 YP_002895023.1 CDS GBP346_A0296 NC_012695.1 252793 252978 D hypothetical protein 252793..252978 Burkholderia pseudomallei MSHR346 7890254 YP_002895024.1 CDS GBP346_A0297 NC_012695.1 253213 254226 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971; sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) 253213..254226 Burkholderia pseudomallei MSHR346 7886917 YP_002895025.1 CDS GBP346_A0298 NC_012695.1 254729 256420 D identified by match to protein family HMM PF00450; serine carboxypeptidase family protein 254729..256420 Burkholderia pseudomallei MSHR346 7889819 YP_002895026.1 CDS GBP346_A0299 NC_012695.1 256493 256897 D hypothetical protein 256493..256897 Burkholderia pseudomallei MSHR346 7890328 YP_002895027.1 CDS GBP346_A0300 NC_012695.1 256977 257138 R hypothetical protein complement(256977..257138) Burkholderia pseudomallei MSHR346 7890823 YP_002895028.1 CDS GBP346_A0301 NC_012695.1 257137 258012 D identified by match to protein family HMM PF01007; match to protein family HMM PF07885; inward rectifier potassium channel 257137..258012 Burkholderia pseudomallei MSHR346 7888841 YP_002895029.1 CDS GBP346_A0302 NC_012695.1 258096 258215 R hypothetical protein complement(258096..258215) Burkholderia pseudomallei MSHR346 7887322 YP_002895030.1 CDS GBP346_A0303 NC_012695.1 258229 261804 D catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 258229..261804 Burkholderia pseudomallei MSHR346 7889459 YP_002895031.1 CDS GBP346_A0304 NC_012695.1 262088 263755 R identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter complement(262088..263755) Burkholderia pseudomallei MSHR346 7890031 YP_002895032.1 CDS GBP346_A0305 NC_012695.1 263809 265356 D identified by match to protein family HMM PF00563; EAL domain protein 263809..265356 Burkholderia pseudomallei MSHR346 7887223 YP_002895033.1 CDS GBP346_A0306 NC_012695.1 265670 265813 D hypothetical protein 265670..265813 Burkholderia pseudomallei MSHR346 7888490 YP_002895034.1 CDS GBP346_A0308 NC_012695.1 265810 266190 D hypothetical protein 265810..266190 Burkholderia pseudomallei MSHR346 7886766 YP_002895035.1 CDS GBP346_A0307 NC_012695.1 266171 266314 R hypothetical protein complement(266171..266314) Burkholderia pseudomallei MSHR346 7887956 YP_002895036.1 CDS GBP346_A0309 NC_012695.1 266486 267925 D identified by match to protein family HMM PF00245; alkaline phosphatase family protein 266486..267925 Burkholderia pseudomallei MSHR346 7890840 YP_002895037.1 CDS GBP346_A0310 NC_012695.1 267958 269361 D identified by match to protein family HMM PF00245; alkaline phosphatase family protein 267958..269361 Burkholderia pseudomallei MSHR346 7888424 YP_002895038.1 CDS GBP346_A0312 NC_012695.1 269376 270161 D hypothetical protein 269376..270161 Burkholderia pseudomallei MSHR346 7889000 YP_002895039.1 CDS GBP346_A0311 NC_012695.1 270149 270337 R identified by glimmer; putative; hypothetical protein complement(270149..270337) Burkholderia pseudomallei MSHR346 7888173 YP_002895040.1 CDS GBP346_A0313 NC_012695.1 270538 271251 D identified by match to protein family HMM PF03932; CutC family protein 270538..271251 Burkholderia pseudomallei MSHR346 7886770 YP_002895041.1 CDS bioB NC_012695.1 271378 272388 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase complement(271378..272388) Burkholderia pseudomallei MSHR346 7888162 YP_002895042.1 CDS bioD NC_012695.1 272461 273183 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(272461..273183) Burkholderia pseudomallei MSHR346 7886949 YP_002895043.1 CDS bioF NC_012695.1 273180 274364 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(273180..274364) Burkholderia pseudomallei MSHR346 7886697 YP_002895044.1 CDS bioA NC_012695.1 274361 275707 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase complement(274361..275707) Burkholderia pseudomallei MSHR346 7887829 YP_002895045.1 CDS GBP346_A0318 NC_012695.1 275696 275833 D hypothetical protein 275696..275833 Burkholderia pseudomallei MSHR346 7888658 YP_002895046.1 CDS GBP346_A0319 NC_012695.1 276271 277599 R hypothetical protein complement(276271..277599) Burkholderia pseudomallei MSHR346 7889390 YP_002895047.1 CDS GBP346_A0320 NC_012695.1 277763 278215 R hypothetical protein complement(277763..278215) Burkholderia pseudomallei MSHR346 7888154 YP_002895048.1 CDS GBP346_A0321 NC_012695.1 278247 278468 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; short chain dehydrogenase complement(278247..278468) Burkholderia pseudomallei MSHR346 7886963 YP_002895049.1 CDS GBP346_A0322 NC_012695.1 278493 278924 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00106; short chain dehydrogenase complement(278493..278924) Burkholderia pseudomallei MSHR346 7886958 YP_002895050.1 CDS GBP346_A0323 NC_012695.1 278955 280148 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(278955..280148) Burkholderia pseudomallei MSHR346 7889667 YP_002895051.1 CDS GBP346_A0324 NC_012695.1 280135 280905 R identified by match to protein family HMM PF00484; carbonic anhydrase 2 (Carbonate dehydratase 2) complement(280135..280905) Burkholderia pseudomallei MSHR346 7890443 YP_002895052.1 CDS aceK NC_012695.1 280963 282804 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(280963..282804) Burkholderia pseudomallei MSHR346 7888277 YP_002895053.1 CDS GBP346_A0326 NC_012695.1 282801 282992 R identified by glimmer; putative; hypothetical protein complement(282801..282992) Burkholderia pseudomallei MSHR346 7890514 YP_002895054.1 CDS GBP346_A0327 NC_012695.1 283063 284142 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 283063..284142 Burkholderia pseudomallei MSHR346 7889941 YP_002895055.1 CDS GBP346_A0328 NC_012695.1 284429 286075 R identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein complement(284429..286075) Burkholderia pseudomallei MSHR346 7888081 YP_002895056.1 CDS GBP346_A0329 NC_012695.1 286309 287895 R identified by match to protein family HMM PF00496; periplasmic dipeptide transport protein complement(286309..287895) Burkholderia pseudomallei MSHR346 7890030 YP_002895057.1 CDS GBP346_A0330 NC_012695.1 287993 288676 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(287993..288676) Burkholderia pseudomallei MSHR346 7886807 YP_002895058.1 CDS GBP346_A0331 NC_012695.1 288872 289360 R identified by match to protein family HMM PF01047; MarR family regulatory protein complement(288872..289360) Burkholderia pseudomallei MSHR346 7889087 YP_002895059.1 CDS GBP346_A0332 NC_012695.1 289341 289469 R hypothetical protein complement(289341..289469) Burkholderia pseudomallei MSHR346 7888817 YP_002895060.1 CDS GBP346_A0333 NC_012695.1 289560 290291 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 289560..290291 Burkholderia pseudomallei MSHR346 7890896 YP_002895061.1 CDS GBP346_A0334 NC_012695.1 290444 291223 R identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase complement(290444..291223) Burkholderia pseudomallei MSHR346 7887872 YP_002895062.1 CDS GBP346_A0335 NC_012695.1 291240 291878 R identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA complement(291240..291878) Burkholderia pseudomallei MSHR346 7887132 YP_002895063.1 CDS GBP346_A0336 NC_012695.1 291930 292790 R identified by match to protein family HMM PF05036; cell division protein complement(291930..292790) Burkholderia pseudomallei MSHR346 7889462 YP_002895064.1 CDS argS NC_012695.1 292857 294641 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(292857..294641) Burkholderia pseudomallei MSHR346 7888889 YP_002895065.1 CDS GBP346_A0338 NC_012695.1 294621 294740 D identified by glimmer; putative; hypothetical protein 294621..294740 Burkholderia pseudomallei MSHR346 7889448 YP_002895066.1 CDS GBP346_A0339 NC_012695.1 294844 295167 D identified by match to protein family HMM PF08895; hypothetical protein 294844..295167 Burkholderia pseudomallei MSHR346 7888775 YP_002895067.1 CDS metH NC_012695.1 295411 298128 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02607; match to protein family HMM PF02965; match to protein family HMM TIGR02082; methionine synthase complement(295411..298128) Burkholderia pseudomallei MSHR346 7890622 YP_002895068.1 CDS GBP346_A0341 NC_012695.1 298174 299253 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF02574; homocysteine S-methyltransferase complement(298174..299253) Burkholderia pseudomallei MSHR346 7888736 YP_002895069.1 CDS GBP346_A0342 NC_012695.1 299441 299698 R hypothetical protein complement(299441..299698) Burkholderia pseudomallei MSHR346 7887515 YP_002895070.1 CDS GBP346_A0343 NC_012695.1 299881 301188 R hypothetical protein complement(299881..301188) Burkholderia pseudomallei MSHR346 7890056 YP_002895071.1 CDS GBP346_A0344 NC_012695.1 301267 302220 R identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family complement(301267..302220) Burkholderia pseudomallei MSHR346 7888914 YP_002895072.1 CDS GBP346_A0345 NC_012695.1 302240 303232 D identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein 302240..303232 Burkholderia pseudomallei MSHR346 7887074 YP_002895073.1 CDS GBP346_A0346 NC_012695.1 303229 303360 D hypothetical protein 303229..303360 Burkholderia pseudomallei MSHR346 7890671 YP_002895074.1 CDS GBP346_A0347 NC_012695.1 303440 304267 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 303440..304267 Burkholderia pseudomallei MSHR346 7886871 YP_002895075.1 CDS GBP346_A0348 NC_012695.1 304357 305148 D hypothetical protein 304357..305148 Burkholderia pseudomallei MSHR346 7888518 YP_002895076.1 CDS GBP346_A0349 NC_012695.1 305185 306429 D identified by match to protein family HMM PF01734; phospholipase, patatin family 305185..306429 Burkholderia pseudomallei MSHR346 7886894 YP_002895077.1 CDS GBP346_A0350 NC_012695.1 306496 306678 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 306496..306678 Burkholderia pseudomallei MSHR346 7890058 YP_002895078.1 CDS GBP346_A0351 NC_012695.1 306785 306928 R hypothetical protein complement(306785..306928) Burkholderia pseudomallei MSHR346 7887396 YP_002895079.1 CDS GBP346_A0352 NC_012695.1 307096 307962 D hypothetical protein 307096..307962 Burkholderia pseudomallei MSHR346 7887027 YP_002895080.1 CDS rfaE_1 NC_012695.1 308103 308588 D identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02199; bifunctional protein RfaE, domain II 308103..308588 Burkholderia pseudomallei MSHR346 7890754 YP_002895081.1 CDS GBP346_A0354 NC_012695.1 308634 309044 R hypothetical protein complement(308634..309044) Burkholderia pseudomallei MSHR346 7888389 YP_002895082.1 CDS GBP346_A0355 NC_012695.1 309148 309918 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(309148..309918) Burkholderia pseudomallei MSHR346 7887751 YP_002895083.1 CDS GBP346_A0356 NC_012695.1 309924 311003 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(309924..311003) Burkholderia pseudomallei MSHR346 7889846 YP_002895084.1 CDS GBP346_A0357 NC_012695.1 311275 312162 R identified by match to protein family HMM PF08238; Sel1 repeat family protein complement(311275..312162) Burkholderia pseudomallei MSHR346 7889598 YP_002895085.1 CDS GBP346_A0358 NC_012695.1 312236 314296 R identified by match to protein family HMM PF00149; match to protein family HMM PF02872; putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(312236..314296) Burkholderia pseudomallei MSHR346 7890901 YP_002895086.1 CDS GBP346_A0359 NC_012695.1 314562 315686 D identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; putative ABC transporter, permease protein 314562..315686 Burkholderia pseudomallei MSHR346 7888215 YP_002895087.1 CDS GBP346_A0360 NC_012695.1 315683 316525 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 315683..316525 Burkholderia pseudomallei MSHR346 7889270 YP_002895088.1 CDS GBP346_A0361 NC_012695.1 316549 317478 D identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein 316549..317478 Burkholderia pseudomallei MSHR346 7887231 YP_002895089.1 CDS GBP346_A0362 NC_012695.1 317497 318135 D hypothetical protein 317497..318135 Burkholderia pseudomallei MSHR346 7890528 YP_002895090.1 CDS GBP346_A0363 NC_012695.1 318167 319378 D identified by match to protein family HMM PF04892; VanZ like protein 318167..319378 Burkholderia pseudomallei MSHR346 7888963 YP_002895091.1 CDS GBP346_A0364 NC_012695.1 319484 319813 D ferredoxin family protein 319484..319813 Burkholderia pseudomallei MSHR346 7889104 YP_002895092.1 CDS GBP346_A0365 NC_012695.1 319860 320504 D alpha/beta hydrolase family protein 319860..320504 Burkholderia pseudomallei MSHR346 7888583 YP_002895093.1 CDS GBP346_A0366 NC_012695.1 321280 322593 D identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase DacC 321280..322593 Burkholderia pseudomallei MSHR346 7890082 YP_002895094.1 CDS GBP346_A0367 NC_012695.1 322683 323630 D identified by match to protein family HMM PF01063; D-amino-acid transaminase 322683..323630 Burkholderia pseudomallei MSHR346 7886836 YP_002895095.1 CDS GBP346_A0368 NC_012695.1 323627 323935 D identified by match to protein family HMM PF04359; hypothetical protein 323627..323935 Burkholderia pseudomallei MSHR346 7887381 YP_002895096.1 CDS GBP346_A0369 NC_012695.1 323946 324911 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(323946..324911) Burkholderia pseudomallei MSHR346 7890023 YP_002895097.1 CDS GBP346_A0370 NC_012695.1 325012 325338 D hypothetical protein 325012..325338 Burkholderia pseudomallei MSHR346 7889008 YP_002895098.1 CDS lipB NC_012695.1 325431 326171 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 325431..326171 Burkholderia pseudomallei MSHR346 7890481 YP_002895099.1 CDS lipA NC_012695.1 326164 327153 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 326164..327153 Burkholderia pseudomallei MSHR346 7888266 YP_002895100.1 CDS GBP346_A0374 NC_012695.1 327189 327386 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 327189..327386 Burkholderia pseudomallei MSHR346 7890543 YP_002895101.1 CDS GBP346_A0373 NC_012695.1 327338 327610 R NADPH:quinone reductase complement(327338..327610) Burkholderia pseudomallei MSHR346 7887219 YP_002895102.1 CDS ggt_1 NC_012695.1 327738 329621 R identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase complement(327738..329621) Burkholderia pseudomallei MSHR346 7890784 YP_002895103.1 CDS GBP346_A0376 NC_012695.1 329943 330218 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 329943..330218 Burkholderia pseudomallei MSHR346 7889314 YP_002895104.1 CDS GBP346_A0377 NC_012695.1 330404 330745 D hypothetical protein 330404..330745 Burkholderia pseudomallei MSHR346 7890072 YP_002895105.1 CDS GBP346_A0378 NC_012695.1 330870 331772 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(330870..331772) Burkholderia pseudomallei MSHR346 7890816 YP_002895106.1 CDS GBP346_A0379 NC_012695.1 331927 334053 D identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM PF03446; peroxisomal bifunctional enzyme 331927..334053 Burkholderia pseudomallei MSHR346 7887076 YP_002895107.1 CDS GBP346_A0380 NC_012695.1 334108 335316 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 334108..335316 Burkholderia pseudomallei MSHR346 7889138 YP_002895108.1 CDS GBP346_A0381 NC_012695.1 335326 336456 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 335326..336456 Burkholderia pseudomallei MSHR346 7887277 YP_002895109.1 CDS GBP346_A0382 NC_012695.1 336482 337687 D identified by match to protein family HMM PF02515; caib/baif family protein 336482..337687 Burkholderia pseudomallei MSHR346 7890244 YP_002895110.1 CDS GBP346_A0383 NC_012695.1 338064 338369 D identified by match to protein family HMM PF04341; hypothetical protein 338064..338369 Burkholderia pseudomallei MSHR346 7887619 YP_002895111.1 CDS actP NC_012695.1 338381 340096 D member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 338381..340096 Burkholderia pseudomallei MSHR346 7890709 YP_002895112.1 CDS dctA NC_012695.1 340464 341750 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 340464..341750 Burkholderia pseudomallei MSHR346 7888910 YP_002895113.1 CDS GBP346_A0386 NC_012695.1 341753 343786 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; C4-dicarboxylate transport sensor histidine kinase DctB 341753..343786 Burkholderia pseudomallei MSHR346 7890483 YP_002895114.1 CDS GBP346_A0387 NC_012695.1 343835 345190 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; C4-dicarboxylate transport transcriptional regulatory protein DctD 343835..345190 Burkholderia pseudomallei MSHR346 7886801 YP_002895115.1 CDS GBP346_A0388 NC_012695.1 345306 345842 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; redoxin domain protein complement(345306..345842) Burkholderia pseudomallei MSHR346 7888791 YP_002895116.1 CDS GBP346_A0389 NC_012695.1 345916 346725 D hypothetical protein 345916..346725 Burkholderia pseudomallei MSHR346 7889472 YP_002895117.1 CDS GBP346_A0391 NC_012695.1 347265 347417 D hypothetical protein 347265..347417 Burkholderia pseudomallei MSHR346 7887281 YP_002895118.1 CDS GBP346_A0390 NC_012695.1 347412 348191 R identified by match to protein family HMM PF00975; thioesterase domain protein complement(347412..348191) Burkholderia pseudomallei MSHR346 7889921 YP_002895119.1 CDS GBP346_A0392 NC_012695.1 348209 348637 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(348209..348637) Burkholderia pseudomallei MSHR346 7889796 YP_002895120.1 CDS GBP346_A0393 NC_012695.1 348692 349156 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 348692..349156 Burkholderia pseudomallei MSHR346 7889584 YP_002895121.1 CDS GBP346_A0394 NC_012695.1 349178 349297 D hypothetical protein 349178..349297 Burkholderia pseudomallei MSHR346 7886847 YP_002895122.1 CDS GBP346_A0395 NC_012695.1 349585 351171 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; putative Mg chelatase family protein complement(349585..351171) Burkholderia pseudomallei MSHR346 7888120 YP_002895123.1 CDS GBP346_A0396 NC_012695.1 351309 351560 R identified by match to protein family HMM PF04380; hypothetical protein complement(351309..351560) Burkholderia pseudomallei MSHR346 7888990 YP_002895124.1 CDS GBP346_A0397 NC_012695.1 351929 352267 D identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 351929..352267 Burkholderia pseudomallei MSHR346 7887445 YP_002895125.1 CDS amt NC_012695.1 352300 353802 D identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 352300..353802 Burkholderia pseudomallei MSHR346 7887559 YP_002895126.1 CDS gshA_2 NC_012695.1 354161 355450 D identified by match to protein family HMM PF08886; match to protein family HMM TIGR02049; glutamate--cysteine ligase 354161..355450 Burkholderia pseudomallei MSHR346 7888782 YP_002895127.1 CDS gshB NC_012695.1 355478 356434 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 355478..356434 Burkholderia pseudomallei MSHR346 7890247 YP_002895128.1 CDS GBP346_A0401 NC_012695.1 356607 357080 D identified by match to protein family HMM PF03610; PTS system, fructose-specific IIA component 356607..357080 Burkholderia pseudomallei MSHR346 7888265 YP_002895129.1 CDS ptsH NC_012695.1 357157 357426 D identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 357157..357426 Burkholderia pseudomallei MSHR346 7888686 YP_002895130.1 CDS ptsP NC_012695.1 357604 359394 D identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 357604..359394 Burkholderia pseudomallei MSHR346 7888158 YP_002895131.1 CDS GBP346_A0404 NC_012695.1 359457 359657 D hypothetical protein 359457..359657 Burkholderia pseudomallei MSHR346 7887552 YP_002895132.1 CDS GBP346_A0405 NC_012695.1 359682 360440 R identified by match to protein family HMM PF00899; match to protein family HMM PF05237; HesA/MoeB/ThiF family protein complement(359682..360440) Burkholderia pseudomallei MSHR346 7890438 YP_002895133.1 CDS GBP346_A0406 NC_012695.1 360545 362119 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxy- protease complement(360545..362119) Burkholderia pseudomallei MSHR346 7887762 YP_002895134.1 CDS gpmA NC_012695.1 362340 363089 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(362340..363089) Burkholderia pseudomallei MSHR346 7889534 YP_002895135.1 CDS GBP346_A0408 NC_012695.1 363223 363630 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00581; rhodanese domain protein 363223..363630 Burkholderia pseudomallei MSHR346 7887458 YP_002895136.1 CDS grxC NC_012695.1 363642 363902 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR02181; glutaredoxin 3 363642..363902 Burkholderia pseudomallei MSHR346 7888954 YP_002895137.1 CDS secB NC_012695.1 364019 364498 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 364019..364498 Burkholderia pseudomallei MSHR346 7889300 YP_002895138.1 CDS gpsA NC_012695.1 364515 365522 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 364515..365522 Burkholderia pseudomallei MSHR346 7886934 YP_002895139.1 CDS GBP346_A0412 NC_012695.1 365642 366208 D identified by match to protein family HMM PF01661; appr-1-p processing enzyme family domain protein 365642..366208 Burkholderia pseudomallei MSHR346 7888571 YP_002895140.1 CDS GBP346_A0413 NC_012695.1 366639 367178 R identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; RNA methyltransferase, TrmH family, group 2 complement(366639..367178) Burkholderia pseudomallei MSHR346 7887213 YP_002895141.1 CDS GBP346_A0414 NC_012695.1 367175 367942 R ComF family protein complement(367175..367942) Burkholderia pseudomallei MSHR346 7889094 YP_002895142.1 CDS GBP346_A0415 NC_012695.1 367975 368991 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase type 11 367975..368991 Burkholderia pseudomallei MSHR346 7890327 YP_002895143.1 CDS GBP346_A0416 NC_012695.1 369228 369704 D hypothetical protein 369228..369704 Burkholderia pseudomallei MSHR346 7886715 YP_002895144.1 CDS GBP346_A0417 NC_012695.1 369754 371331 D identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM PF00691; match to protein family HMM PF02790; match to protein family HMM TIGR02866; cytochrome c oxidase, subunit II 369754..371331 Burkholderia pseudomallei MSHR346 7887274 YP_002895145.1 CDS ctaD_1 NC_012695.1 371375 372982 D identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891; cytochrome c oxidase, subunit I 371375..372982 Burkholderia pseudomallei MSHR346 7889057 YP_002895146.1 CDS GBP346_A0419 NC_012695.1 373006 373191 D hypothetical protein 373006..373191 Burkholderia pseudomallei MSHR346 7888682 YP_002895147.1 CDS GBP346_A0420 NC_012695.1 373213 373818 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 373213..373818 Burkholderia pseudomallei MSHR346 7889362 YP_002895148.1 CDS GBP346_A0421 NC_012695.1 373835 374038 D hypothetical protein 373835..374038 Burkholderia pseudomallei MSHR346 7889449 YP_002895149.1 CDS GBP346_A0422 NC_012695.1 374172 375029 D identified by match to protein family HMM PF00510; cytochrome c oxidase subunit III 374172..375029 Burkholderia pseudomallei MSHR346 7890194 YP_002895150.1 CDS GBP346_A0423 NC_012695.1 375189 375440 R hypothetical protein complement(375189..375440) Burkholderia pseudomallei MSHR346 7887110 YP_002895151.1 CDS GBP346_A0424 NC_012695.1 375486 376199 D surf1 family protein 375486..376199 Burkholderia pseudomallei MSHR346 7890529 YP_002895152.1 CDS GBP346_A0425 NC_012695.1 376348 376905 D hypothetical protein 376348..376905 Burkholderia pseudomallei MSHR346 7887558 YP_002895153.1 CDS GBP346_A0426 NC_012695.1 376949 378058 D identified by match to protein family HMM PF02628; cytochrome oxidase assembly protein 376949..378058 Burkholderia pseudomallei MSHR346 7889241 YP_002895154.1 CDS cyoE NC_012695.1 378071 378973 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 378071..378973 Burkholderia pseudomallei MSHR346 7890165 YP_002895155.1 CDS GBP346_A0428 NC_012695.1 378993 379610 D identified by match to protein family HMM PF00578; match to protein family HMM PF02630; SCO1/SenC family protein 378993..379610 Burkholderia pseudomallei MSHR346 7887734 YP_002895156.1 CDS GBP346_A0429 NC_012695.1 379690 379983 R identified by match to protein family HMM PF03795; YCII-related domain superfamily protein complement(379690..379983) Burkholderia pseudomallei MSHR346 7889353 YP_002895157.1 CDS GBP346_A0430 NC_012695.1 380170 381810 D identified by match to protein family HMM PF00015; match to protein family HMM PF08269; methyl-accepting chemotaxis protein 380170..381810 Burkholderia pseudomallei MSHR346 7887414 YP_002895158.1 CDS GBP346_A0431 NC_012695.1 381807 381959 D hypothetical protein 381807..381959 Burkholderia pseudomallei MSHR346 7886943 YP_002895159.1 CDS GBP346_A0432 NC_012695.1 381960 382778 D identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; D-methionine-binding lipoprotein MetQ 381960..382778 Burkholderia pseudomallei MSHR346 7887161 YP_002895160.1 CDS GBP346_A0433 NC_012695.1 383029 384000 D identified by match to protein family HMM PF04392; ABC-type transporter, periplasmic component 383029..384000 Burkholderia pseudomallei MSHR346 7888920 YP_002895161.1 CDS GBP346_A0434 NC_012695.1 384319 385215 D identified by match to protein family HMM PF02653; ABC transporter, permease protein 384319..385215 Burkholderia pseudomallei MSHR346 7889706 YP_002895162.1 CDS GBP346_A0435 NC_012695.1 385216 386010 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 385216..386010 Burkholderia pseudomallei MSHR346 7888369 YP_002895163.1 CDS GBP346_A0436 NC_012695.1 386217 386927 D hypothetical protein 386217..386927 Burkholderia pseudomallei MSHR346 7887189 YP_002895164.1 CDS GBP346_A0437 NC_012695.1 386905 388335 D hypothetical protein 386905..388335 Burkholderia pseudomallei MSHR346 7887026 YP_002895165.1 CDS dnaE2 NC_012695.1 388341 391571 D DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 388341..391571 Burkholderia pseudomallei MSHR346 7887486 YP_002895166.1 CDS GBP346_A0439 NC_012695.1 391864 392685 R hypothetical protein complement(391864..392685) Burkholderia pseudomallei MSHR346 7889841 YP_002895167.1 CDS GBP346_A0440 NC_012695.1 392729 393922 R identified by match to protein family HMM PF07690; major facilitator family transporter complement(392729..393922) Burkholderia pseudomallei MSHR346 7888787 YP_002895168.1 CDS GBP346_A0442 NC_012695.1 393909 394169 D hypothetical protein 393909..394169 Burkholderia pseudomallei MSHR346 7888053 YP_002895169.1 CDS GBP346_A0441 NC_012695.1 394124 395125 R identified by match to protein family HMM PF00487; fatty acid desaturase family protein complement(394124..395125) Burkholderia pseudomallei MSHR346 7889659 YP_002895170.1 CDS GBP346_A0443 NC_012695.1 395201 396553 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00202; match to protein family HMM TIGR00709; diaminobutyrate--2-oxoglutarate transaminase complement(395201..396553) Burkholderia pseudomallei MSHR346 7888127 YP_002895171.1 CDS GBP346_A0444 NC_012695.1 396598 397131 R hypothetical protein complement(396598..397131) Burkholderia pseudomallei MSHR346 7890815 YP_002895172.1 CDS GBP346_A0445 NC_012695.1 397206 398297 R identified by match to protein family HMM PF01061; ABC-2 type transporter, permease protein complement(397206..398297) Burkholderia pseudomallei MSHR346 7888590 YP_002895173.1 CDS GBP346_A0446 NC_012695.1 398290 399333 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(398290..399333) Burkholderia pseudomallei MSHR346 7889793 YP_002895174.1 CDS GBP346_A0447 NC_012695.1 399339 400406 R identified by match to protein family HMM PF02668; taurine catabolism dioxygenase TauD/TfdA complement(399339..400406) Burkholderia pseudomallei MSHR346 7889109 YP_002895175.1 CDS GBP346_A0448 NC_012695.1 400403 401068 R identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase, UbiE/COQ5 family complement(400403..401068) Burkholderia pseudomallei MSHR346 7887109 YP_002895176.1 CDS GBP346_A0449 NC_012695.1 401108 402259 R identified by match to protein family HMM PF00285; citrate synthase-related protein complement(401108..402259) Burkholderia pseudomallei MSHR346 7890503 YP_002895177.1 CDS GBP346_A0450 NC_012695.1 402261 404132 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein complement(402261..404132) Burkholderia pseudomallei MSHR346 7887455 YP_002895178.1 CDS GBP346_A0451 NC_012695.1 404129 405169 R identified by match to protein family HMM PF08541; 3-oxoacyl-[acyl-carrier-protein] synthase III complement(404129..405169) Burkholderia pseudomallei MSHR346 7887538 YP_002895179.1 CDS GBP346_A0452 NC_012695.1 405187 406755 R identified by match to protein family HMM PF00501; match to protein family HMM TIGR03098; acyl-CoA ligase (AMP-forming), exosortase system type 1 associated complement(405187..406755) Burkholderia pseudomallei MSHR346 7889523 YP_002895180.1 CDS GBP346_A0453 NC_012695.1 406763 407959 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; pyridoxal-dependent decarboxylase family protein complement(406763..407959) Burkholderia pseudomallei MSHR346 7888635 YP_002895181.1 CDS GBP346_A0454 NC_012695.1 407949 408947 R hypothetical protein complement(407949..408947) Burkholderia pseudomallei MSHR346 7890865 YP_002895182.1 CDS GBP346_A0455 NC_012695.1 408952 409935 R hypothetical protein complement(408952..409935) Burkholderia pseudomallei MSHR346 7887713 YP_002895183.1 CDS GBP346_A0456 NC_012695.1 409954 410520 R hypothetical protein complement(409954..410520) Burkholderia pseudomallei MSHR346 7890164 YP_002895184.1 CDS GBP346_A0457 NC_012695.1 410517 411404 R hypothetical protein complement(410517..411404) Burkholderia pseudomallei MSHR346 7889611 YP_002895185.1 CDS GBP346_A0458 NC_012695.1 411437 411685 R phosphopantetheine-binding complement(411437..411685) Burkholderia pseudomallei MSHR346 7890317 YP_002895186.1 CDS GBP346_A0459 NC_012695.1 411741 412859 R hypothetical protein complement(411741..412859) Burkholderia pseudomallei MSHR346 7887773 YP_002895187.1 CDS GBP346_A0460 NC_012695.1 412939 414705 R identified by match to protein family HMM PF00501; AMP-binding domain protein complement(412939..414705) Burkholderia pseudomallei MSHR346 7888894 YP_002895188.1 CDS GBP346_A0461 NC_012695.1 415139 416062 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 415139..416062 Burkholderia pseudomallei MSHR346 7887421 YP_002895189.1 CDS GBP346_A0462 NC_012695.1 416805 417539 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; transcriptional regulator, GntR family 416805..417539 Burkholderia pseudomallei MSHR346 7888617 YP_002895190.1 CDS nagA NC_012695.1 417638 418741 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 417638..418741 Burkholderia pseudomallei MSHR346 7889935 YP_002895191.1 CDS GBP346_A0464 NC_012695.1 418725 419741 D identified by match to protein family HMM PF01380; SIS domain protein 418725..419741 Burkholderia pseudomallei MSHR346 7890071 YP_002895192.1 CDS GBP346_A0465 NC_012695.1 419799 422387 D identified by match to protein family HMM PF00358; match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR00830; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; pts system, glucose-glucoside (glc) family eiia/phosphocarrier hpr/phosphoenolpyruvate-protein phosphotransferase component 419799..422387 Burkholderia pseudomallei MSHR346 7886722 YP_002895193.1 CDS nagE NC_012695.1 422500 424260 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998; pts system, N-acetylglucosamine-specific iibc component 422500..424260 Burkholderia pseudomallei MSHR346 7889652 YP_002895194.1 CDS GBP346_A0467 NC_012695.1 424946 427447 R identified by match to protein family HMM PF00728; match to protein family HMM PF03173; chitobiase complement(424946..427447) Burkholderia pseudomallei MSHR346 7886975 YP_002895195.1 CDS GBP346_A0468 NC_012695.1 427658 427918 R hypothetical protein complement(427658..427918) Burkholderia pseudomallei MSHR346 7887273 YP_002895196.1 CDS GBP346_A0469 NC_012695.1 428162 428338 R identified by glimmer; putative; hypothetical protein complement(428162..428338) Burkholderia pseudomallei MSHR346 7890027 YP_002895197.1 CDS GBP346_A0470 NC_012695.1 428335 428757 R hypothetical protein complement(428335..428757) Burkholderia pseudomallei MSHR346 7888688 YP_002895198.1 CDS GBP346_A0471 NC_012695.1 428785 428955 R identified by match to protein family HMM PF08173; match to protein family HMM TIGR02106; hypothetical protein complement(428785..428955) Burkholderia pseudomallei MSHR346 7888297 YP_002895199.1 CDS cydB_1 NC_012695.1 428974 430110 R identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome D ubiquinol oxidase, subunit II complement(428974..430110) Burkholderia pseudomallei MSHR346 7887384 YP_002895200.1 CDS cydA NC_012695.1 430148 431743 R identified by match to protein family HMM PF01654; cytochrome D ubiquinol oxidase, subunit I complement(430148..431743) Burkholderia pseudomallei MSHR346 7890220 YP_002895201.1 CDS GBP346_A0474 NC_012695.1 431733 432017 R hypothetical protein complement(431733..432017) Burkholderia pseudomallei MSHR346 7887399 YP_002895202.1 CDS rpoH NC_012695.1 432496 433431 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(432496..433431) Burkholderia pseudomallei MSHR346 7888491 YP_002895203.1 CDS GBP346_A0476 NC_012695.1 433629 433748 R identified by glimmer; putative; hypothetical protein complement(433629..433748) Burkholderia pseudomallei MSHR346 7889882 YP_002895204.1 CDS GBP346_A0477 NC_012695.1 433754 434365 D identified by match to protein family HMM PF09411; lipid A 3-O-deacylase (PagL) superfamily 433754..434365 Burkholderia pseudomallei MSHR346 7890932 YP_002895205.1 CDS GBP346_A0478 NC_012695.1 434407 434793 D identified by match to protein family HMM TIGR02246; hypothetical protein 434407..434793 Burkholderia pseudomallei MSHR346 7888260 YP_002895206.1 CDS GBP346_A0479 NC_012695.1 435120 436760 R identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970; 2-isopropylmalate synthase complement(435120..436760) Burkholderia pseudomallei MSHR346 7887044 YP_002895207.1 CDS GBP346_A0480 NC_012695.1 436708 436917 D hypothetical protein 436708..436917 Burkholderia pseudomallei MSHR346 7887738 YP_002895208.1 CDS GBP346_A0481 NC_012695.1 437195 438016 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(437195..438016) Burkholderia pseudomallei MSHR346 7888151 YP_002895209.1 CDS GBP346_A0482 NC_012695.1 438664 439644 R identified by match to protein family HMM PF02885; glycosyl transferase family protein complement(438664..439644) Burkholderia pseudomallei MSHR346 7890315 YP_002895210.1 CDS GBP346_A0483 NC_012695.1 439641 442496 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04324; match to protein family HMM PF04879; nitrate reductase complement(439641..442496) Burkholderia pseudomallei MSHR346 7886866 YP_002895211.1 CDS GBP346_A0484 NC_012695.1 442493 442951 R identified by match to protein family HMM PF00355; match to protein family HMM TIGR02378; nitrite reductase complement(442493..442951) Burkholderia pseudomallei MSHR346 7890659 YP_002895212.1 CDS nirB_1 NC_012695.1 442964 445408 R identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; nitrite reductase [NAD(P)H], large subunit complement(442964..445408) Burkholderia pseudomallei MSHR346 7887696 YP_002895213.1 CDS GBP346_A0486 NC_012695.1 445546 445806 D hypothetical protein 445546..445806 Burkholderia pseudomallei MSHR346 7887087 YP_002895214.1 CDS maiA NC_012695.1 445793 446437 D identified by match to protein family HMM PF02798; match to protein family HMM TIGR01262; maleylacetoacetate isomerase 445793..446437 Burkholderia pseudomallei MSHR346 7889525 YP_002895215.1 CDS GBP346_A0489 NC_012695.1 446475 446597 D hypothetical protein 446475..446597 Burkholderia pseudomallei MSHR346 7887477 YP_002895216.1 CDS ftsY NC_012695.1 446594 447910 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(446594..447910) Burkholderia pseudomallei MSHR346 7890954 YP_002895217.1 CDS GBP346_A0490 NC_012695.1 448162 448788 D identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RNA methyltransferase, RsmD family 448162..448788 Burkholderia pseudomallei MSHR346 7888039 YP_002895218.1 CDS coaD NC_012695.1 448899 449399 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 448899..449399 Burkholderia pseudomallei MSHR346 7888547 YP_002895219.1 CDS GBP346_A0492 NC_012695.1 449351 449728 D identified by match to protein family HMM PF00037; ferredoxin 449351..449728 Burkholderia pseudomallei MSHR346 7889974 YP_002895220.1 CDS hisC_1 NC_012695.1 449907 450980 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(449907..450980) Burkholderia pseudomallei MSHR346 7887985 YP_002895221.1 CDS pth NC_012695.1 451066 451671 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(451066..451671) Burkholderia pseudomallei MSHR346 7888887 YP_002895222.1 CDS GBP346_A0495 NC_012695.1 451785 452399 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(451785..452399) Burkholderia pseudomallei MSHR346 7890419 YP_002895223.1 CDS GBP346_A0496 NC_012695.1 452563 453519 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(452563..453519) Burkholderia pseudomallei MSHR346 7890873 YP_002895224.1 CDS ipk NC_012695.1 453697 454578 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(453697..454578) Burkholderia pseudomallei MSHR346 7889196 YP_002895225.1 CDS lolB NC_012695.1 454612 455235 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(454612..455235) Burkholderia pseudomallei MSHR346 7889864 YP_002895226.1 CDS GBP346_A0500 NC_012695.1 455232 457052 R identified by match to protein family HMM PF00515; match to protein family HMM PF07721; TPR domain protein complement(455232..457052) Burkholderia pseudomallei MSHR346 7887524 YP_002895227.1 CDS mutM NC_012695.1 457141 457971 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 457141..457971 Burkholderia pseudomallei MSHR346 7890320 YP_002895228.1 CDS mutY NC_012695.1 457976 459082 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 457976..459082 Burkholderia pseudomallei MSHR346 7888880 YP_002895229.1 CDS GBP346_A0503 NC_012695.1 459476 460108 R identified by match to protein family HMM PF02190; ATP-dependent protease La domain protein complement(459476..460108) Burkholderia pseudomallei MSHR346 7890269 YP_002895230.1 CDS GBP346_A0504 NC_012695.1 460135 461028 R identified by match to protein family HMM PF03668; hypothetical protein complement(460135..461028) Burkholderia pseudomallei MSHR346 7889095 YP_002895231.1 CDS GBP346_A0505 NC_012695.1 461114 462082 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(461114..462082) Burkholderia pseudomallei MSHR346 7887241 YP_002895232.1 CDS GBP346_A0506 NC_012695.1 462211 462729 R identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419; nitrogen regulatory protein (Enzyme IIA-NTR) complement(462211..462729) Burkholderia pseudomallei MSHR346 7888560 YP_002895233.1 CDS raiA NC_012695.1 462953 463312 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein complement(462953..463312) Burkholderia pseudomallei MSHR346 7887891 YP_002895234.1 CDS rpoN_1 NC_012695.1 463462 465003 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(463462..465003) Burkholderia pseudomallei MSHR346 7889560 YP_002895235.1 CDS GBP346_A0509 NC_012695.1 465139 465915 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(465139..465915) Burkholderia pseudomallei MSHR346 7888437 YP_002895236.1 CDS lptA NC_012695.1 465912 466577 R identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; lipopolysaccharide transport periplasmic protein LptA complement(465912..466577) Burkholderia pseudomallei MSHR346 7887950 YP_002895237.1 CDS GBP346_A0511 NC_012695.1 466596 467210 R identified by match to protein family HMM PF06835; hypothetical protein complement(466596..467210) Burkholderia pseudomallei MSHR346 7888309 YP_002895238.1 CDS GBP346_A0512 NC_012695.1 467216 467758 R identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) complement(467216..467758) Burkholderia pseudomallei MSHR346 7887431 YP_002895239.1 CDS GBP346_A0513 NC_012695.1 467755 468738 R identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose 5-phosphate isomerase complement(467755..468738) Burkholderia pseudomallei MSHR346 7889421 YP_002895240.1 CDS GBP346_A0514 NC_012695.1 468866 470875 D identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; transporter, monovalent cation:proton antiporter-2 468866..470875 Burkholderia pseudomallei MSHR346 7887650 YP_002895241.1 CDS apt NC_012695.1 470872 471522 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 470872..471522 Burkholderia pseudomallei MSHR346 7887284 YP_002895242.1 CDS GBP346_A0516 NC_012695.1 471616 472230 D identified by match to protein family HMM PF01810; translocator protein, LysE family 471616..472230 Burkholderia pseudomallei MSHR346 7889923 YP_002895243.1 CDS GBP346_A0517 NC_012695.1 472243 473100 D identified by match to protein family HMM PF00293; hydrolase, NUDIX family 472243..473100 Burkholderia pseudomallei MSHR346 7888123 YP_002895244.1 CDS purU NC_012695.1 473152 474033 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 473152..474033 Burkholderia pseudomallei MSHR346 7887473 YP_002895245.1 CDS GBP346_A0519 NC_012695.1 474330 475415 R hypothetical protein complement(474330..475415) Burkholderia pseudomallei MSHR346 7888765 YP_002895246.1 CDS uvrA NC_012695.1 475616 478483 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC, A subunit complement(475616..478483) Burkholderia pseudomallei MSHR346 7889485 YP_002895247.1 CDS GBP346_A0521 NC_012695.1 478727 479884 D identified by match to protein family HMM PF07690; major facilitator family transporter 478727..479884 Burkholderia pseudomallei MSHR346 7888264 YP_002895248.1 CDS GBP346_A0522 NC_012695.1 479998 480552 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 479998..480552 Burkholderia pseudomallei MSHR346 7889833 YP_002895249.1 CDS GBP346_A0523 NC_012695.1 480664 481395 R identified by match to protein family HMM PF01738; dienelactone hydrolase family protein complement(480664..481395) Burkholderia pseudomallei MSHR346 7888785 YP_002895250.1 CDS GBP346_A0524 NC_012695.1 481449 481616 R hypothetical protein complement(481449..481616) Burkholderia pseudomallei MSHR346 7888216 YP_002895251.1 CDS GBP346_A0525 NC_012695.1 481738 483318 D hypothetical protein 481738..483318 Burkholderia pseudomallei MSHR346 7890897 YP_002895252.1 CDS GBP346_A0526 NC_012695.1 483480 483725 R hypothetical protein complement(483480..483725) Burkholderia pseudomallei MSHR346 7887765 YP_002895253.1 CDS GBP346_A0527 NC_012695.1 483713 483838 D identified by glimmer; putative; hypothetical protein 483713..483838 Burkholderia pseudomallei MSHR346 7888396 YP_002895254.1 CDS GBP346_A0528 NC_012695.1 483904 484221 R hypothetical protein complement(483904..484221) Burkholderia pseudomallei MSHR346 7890233 YP_002895255.1 CDS GBP346_A0529 NC_012695.1 484383 484550 D identified by glimmer; putative; hypothetical protein 484383..484550 Burkholderia pseudomallei MSHR346 7890730 YP_002895256.1 CDS GBP346_A0530 NC_012695.1 484836 484967 R identified by glimmer; putative; hypothetical protein complement(484836..484967) Burkholderia pseudomallei MSHR346 7889249 YP_002895257.1 CDS GBP346_A0531 NC_012695.1 485043 485966 R identified by glimmer; putative; hypothetical protein complement(485043..485966) Burkholderia pseudomallei MSHR346 7886742 YP_002895258.1 CDS GBP346_A0532 NC_012695.1 486110 486460 R identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase family protein complement(486110..486460) Burkholderia pseudomallei MSHR346 7890900 YP_002895259.1 CDS GBP346_A0533 NC_012695.1 486512 486733 R hypothetical protein complement(486512..486733) Burkholderia pseudomallei MSHR346 7889914 YP_002895260.1 CDS GBP346_A0534 NC_012695.1 486730 492825 R identified by match to protein family HMM PF01839; match to protein family HMM PF05593; match to protein family HMM TIGR01643; match to protein family HMM TIGR03696; FG-GAP repeat/YD repeat/RHS repeat protein complement(486730..492825) Burkholderia pseudomallei MSHR346 7888476 YP_002895261.1 CDS GBP346_A0535 NC_012695.1 492847 496113 R hypothetical protein complement(492847..496113) Burkholderia pseudomallei MSHR346 7889899 YP_002895262.1 CDS GBP346_A0536 NC_012695.1 496086 496301 R hypothetical protein complement(496086..496301) Burkholderia pseudomallei MSHR346 7888155 YP_002895263.1 CDS GBP346_A0537 NC_012695.1 496331 496447 R hypothetical protein complement(496331..496447) Burkholderia pseudomallei MSHR346 7889419 YP_002895264.1 CDS GBP346_A0538 NC_012695.1 496654 496785 R identified by glimmer; putative; hypothetical protein complement(496654..496785) Burkholderia pseudomallei MSHR346 7888951 YP_002895265.1 CDS GBP346_A0539 NC_012695.1 496885 497043 D hypothetical protein 496885..497043 Burkholderia pseudomallei MSHR346 7888674 YP_002895266.1 CDS GBP346_A0540 NC_012695.1 497325 497708 R hypothetical protein complement(497325..497708) Burkholderia pseudomallei MSHR346 7889078 YP_002895267.1 CDS GBP346_A0541 NC_012695.1 497726 498163 R hypothetical protein complement(497726..498163) Burkholderia pseudomallei MSHR346 7887282 YP_002895268.1 CDS GBP346_A0542 NC_012695.1 498390 498767 R hypothetical protein complement(498390..498767) Burkholderia pseudomallei MSHR346 7889153 YP_002895269.1 CDS GBP346_A0543 NC_012695.1 499009 499254 R hypothetical protein complement(499009..499254) Burkholderia pseudomallei MSHR346 7887768 YP_002895270.1 CDS GBP346_A0544 NC_012695.1 499251 499604 R hypothetical protein complement(499251..499604) Burkholderia pseudomallei MSHR346 7887353 YP_002895271.1 CDS GBP346_A0545 NC_012695.1 499864 500871 D identified by match to protein family HMM PF00498; FHA domain protein 499864..500871 Burkholderia pseudomallei MSHR346 7890670 YP_002895272.1 CDS GBP346_A0546 NC_012695.1 500882 504961 D identified by match to protein family HMM PF00069; protein kinase domain protein 500882..504961 Burkholderia pseudomallei MSHR346 7886881 YP_002895273.1 CDS GBP346_A0547 NC_012695.1 504958 505320 D hypothetical protein 504958..505320 Burkholderia pseudomallei MSHR346 7890187 YP_002895274.1 CDS GBP346_A0548 NC_012695.1 505322 505684 D hypothetical protein 505322..505684 Burkholderia pseudomallei MSHR346 7887346 YP_002895275.1 CDS GBP346_A0549 NC_012695.1 505776 508076 D identified by match to protein family HMM PF02624; match to protein family HMM TIGR00702; match to protein family HMM TIGR03604; AknN 505776..508076 Burkholderia pseudomallei MSHR346 7887786 YP_002895276.1 CDS GBP346_A0550 NC_012695.1 508146 508922 D identified by match to protein family HMM PF00596; aldolase II superfamily protein 508146..508922 Burkholderia pseudomallei MSHR346 7889848 YP_002895277.1 CDS GBP346_A0551 NC_012695.1 509030 509206 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(509030..509206) Burkholderia pseudomallei MSHR346 7889596 YP_002895278.1 CDS GBP346_A0552 NC_012695.1 509221 509340 D hypothetical protein 509221..509340 Burkholderia pseudomallei MSHR346 7889229 YP_002895279.1 CDS GBP346_A0553 NC_012695.1 509405 511768 D identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; eal/ggdef domain protein 509405..511768 Burkholderia pseudomallei MSHR346 7889876 YP_002895280.1 CDS GBP346_A0554 NC_012695.1 511959 513227 R identified by match to protein family HMM PF01943; transporter, polysaccharide transporter complement(511959..513227) Burkholderia pseudomallei MSHR346 7890918 YP_002895281.1 CDS GBP346_A0555 NC_012695.1 513304 514500 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family complement(513304..514500) Burkholderia pseudomallei MSHR346 7888570 YP_002895282.1 CDS GBP346_A0556 NC_012695.1 514535 516127 R identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(514535..516127) Burkholderia pseudomallei MSHR346 7886863 YP_002895283.1 CDS GBP346_A0557 NC_012695.1 516124 516774 R ElaA family protein complement(516124..516774) Burkholderia pseudomallei MSHR346 7886826 YP_002895284.1 CDS GBP346_A0558 NC_012695.1 516741 517133 R hypothetical protein complement(516741..517133) Burkholderia pseudomallei MSHR346 7889081 YP_002895285.1 CDS GBP346_A0559 NC_012695.1 517152 518393 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 517152..518393 Burkholderia pseudomallei MSHR346 7890083 YP_002895286.1 CDS GBP346_A0560 NC_012695.1 518421 519155 D identified by match to protein family HMM PF01569; PAP2 family protein 518421..519155 Burkholderia pseudomallei MSHR346 7890003 YP_002895287.1 CDS GBP346_A0561 NC_012695.1 519205 519330 D hypothetical protein 519205..519330 Burkholderia pseudomallei MSHR346 7888415 YP_002895288.1 CDS GBP346_A0562 NC_012695.1 519957 521288 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator 519957..521288 Burkholderia pseudomallei MSHR346 7890401 YP_002895289.1 CDS GBP346_A0563 NC_012695.1 521312 523288 R hypothetical protein complement(521312..523288) Burkholderia pseudomallei MSHR346 7886899 YP_002895290.1 CDS GBP346_A0564 NC_012695.1 523285 525804 R glycosyl hydrolase, family 2 complement(523285..525804) Burkholderia pseudomallei MSHR346 7889482 YP_002895291.1 CDS GBP346_A0565 NC_012695.1 525801 526889 R identified by match to protein family HMM PF08893; hypothetical protein complement(525801..526889) Burkholderia pseudomallei MSHR346 7890413 YP_002895292.1 CDS GBP346_A0566 NC_012695.1 526886 527860 R hypothetical protein complement(526886..527860) Burkholderia pseudomallei MSHR346 7889027 YP_002895293.1 CDS GBP346_A0567 NC_012695.1 527857 529080 R identified by match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein complement(527857..529080) Burkholderia pseudomallei MSHR346 7887974 YP_002895294.1 CDS GBP346_A0568 NC_012695.1 529077 529328 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(529077..529328) Burkholderia pseudomallei MSHR346 7888866 YP_002895295.1 CDS GBP346_A0569 NC_012695.1 529573 530367 R identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain protein complement(529573..530367) Burkholderia pseudomallei MSHR346 7887360 YP_002895296.1 CDS GBP346_A0570 NC_012695.1 530364 530564 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(530364..530564) Burkholderia pseudomallei MSHR346 7890798 YP_002895297.1 CDS GBP346_A0571 NC_012695.1 530531 530761 D identified by glimmer; putative; hypothetical protein 530531..530761 Burkholderia pseudomallei MSHR346 7889407 YP_002895298.1 CDS GBP346_A0572 NC_012695.1 531292 532101 D hypothetical protein 531292..532101 Burkholderia pseudomallei MSHR346 7890130 YP_002895299.1 CDS GBP346_A0573 NC_012695.1 532134 533516 D identified by match to protein family HMM PF02397; match to protein family HMM TIGR03023; match to protein family HMM TIGR03025; undecaprenyl-phosphate glucose phosphotransferase 532134..533516 Burkholderia pseudomallei MSHR346 7888282 YP_002895300.1 CDS GBP346_A0574 NC_012695.1 533588 534877 D identified by match to protein family HMM PF02563; capsular polysaccharide biosynthesis/export protein 533588..534877 Burkholderia pseudomallei MSHR346 7889709 YP_002895301.1 CDS GBP346_A0575 NC_012695.1 535058 536302 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 535058..536302 Burkholderia pseudomallei MSHR346 7886918 YP_002895302.1 CDS GBP346_A0576 NC_012695.1 536331 537353 R hypothetical protein complement(536331..537353) Burkholderia pseudomallei MSHR346 7887128 YP_002895303.1 CDS GBP346_A0577 NC_012695.1 537375 537662 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(537375..537662) Burkholderia pseudomallei MSHR346 7888385 YP_002895304.1 CDS GBP346_A0578 NC_012695.1 537948 538382 D identified by match to protein family HMM PF07452; chrd domain protein 537948..538382 Burkholderia pseudomallei MSHR346 7888223 YP_002895305.1 CDS GBP346_A0580 NC_012695.1 538474 539439 D identified by match to protein family HMM PF07859; lipolytic enzyme 538474..539439 Burkholderia pseudomallei MSHR346 7887919 YP_002895306.1 CDS GBP346_A0579 NC_012695.1 539409 540323 R hypothetical protein complement(539409..540323) Burkholderia pseudomallei MSHR346 7890628 YP_002895307.1 CDS GBP346_A0581 NC_012695.1 540430 542025 D identified by match to protein family HMM PF07690; drug resistance MFS transporter, drug:H+ antiporter-1 family 540430..542025 Burkholderia pseudomallei MSHR346 7887056 YP_002895308.1 CDS GBP346_A0582 NC_012695.1 542074 542508 D identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 542074..542508 Burkholderia pseudomallei MSHR346 7890210 YP_002895309.1 CDS GBP346_A0583 NC_012695.1 542626 543207 R identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; intracellular protease, PfpI family complement(542626..543207) Burkholderia pseudomallei MSHR346 7887976 YP_002895310.1 CDS GBP346_A0584 NC_012695.1 543357 544637 R D-serine ammonia-lyase complement(543357..544637) Burkholderia pseudomallei MSHR346 7890338 YP_002895311.1 CDS GBP346_A0585 NC_012695.1 544775 545668 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator, RpiR family 544775..545668 Burkholderia pseudomallei MSHR346 7888730 YP_002895312.1 CDS GBP346_A0586 NC_012695.1 545670 547151 D identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969; N-acyl-D-aspartate deacylase 545670..547151 Burkholderia pseudomallei MSHR346 7887420 YP_002895313.1 CDS GBP346_A0587 NC_012695.1 547162 547281 D hypothetical protein 547162..547281 Burkholderia pseudomallei MSHR346 7888428 YP_002895314.1 CDS GBP346_A0588 NC_012695.1 547278 547664 D identified by match to protein family HMM PF01042; putative endoribonuclease L-PSP 547278..547664 Burkholderia pseudomallei MSHR346 7887578 YP_002895315.1 CDS queF NC_012695.1 548025 548849 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(548025..548849) Burkholderia pseudomallei MSHR346 7888287 YP_002895316.1 CDS ilvA_1 NC_012695.1 548869 550392 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(548869..550392) Burkholderia pseudomallei MSHR346 7889463 YP_002895317.1 CDS GBP346_A0591 NC_012695.1 550667 550900 R hypothetical protein complement(550667..550900) Burkholderia pseudomallei MSHR346 7888458 YP_002895318.1 CDS GBP346_A0592 NC_012695.1 550899 554927 D identified by match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; oxidoreductase, FAD-binding 550899..554927 Burkholderia pseudomallei MSHR346 7887237 YP_002895319.1 CDS GBP346_A0593 NC_012695.1 554947 555405 D identified by match to protein family HMM PF01230; HIT domain protein 554947..555405 Burkholderia pseudomallei MSHR346 7889807 YP_002895320.1 CDS GBP346_A0594 NC_012695.1 555402 555815 D identified by match to protein family HMM PF06155; hypothetical protein 555402..555815 Burkholderia pseudomallei MSHR346 7887542 YP_002895321.1 CDS ubiE NC_012695.1 555863 556594 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 555863..556594 Burkholderia pseudomallei MSHR346 7888303 YP_002895322.1 CDS GBP346_A0596 NC_012695.1 556684 557655 D identified by match to protein family HMM PF04280; Tim44 domain protein 556684..557655 Burkholderia pseudomallei MSHR346 7890626 YP_002895323.1 CDS GBP346_A0597 NC_012695.1 557736 558410 D sterol-binding domain protein 557736..558410 Burkholderia pseudomallei MSHR346 7888501 YP_002895324.1 CDS ubiB NC_012695.1 558423 560000 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 558423..560000 Burkholderia pseudomallei MSHR346 7890765 YP_002895325.1 CDS GBP346_A0599 NC_012695.1 559997 560164 D hypothetical protein 559997..560164 Burkholderia pseudomallei MSHR346 7887868 YP_002895326.1 CDS GBP346_A0600 NC_012695.1 560190 560969 D identified by match to protein family HMM PF05724; match to protein family HMM PF08242; thiopurine S-methyltransferase family protein 560190..560969 Burkholderia pseudomallei MSHR346 7888500 YP_002895327.1 CDS GBP346_A0601 NC_012695.1 561070 561411 D identified by match to protein family HMM PF09723; match to protein family HMM TIGR02605; regulatory protein, FmdB family 561070..561411 Burkholderia pseudomallei MSHR346 7888420 YP_002895328.1 CDS GBP346_A0602 NC_012695.1 561482 562129 D identified by match to protein family HMM PF04367; hypothetical protein 561482..562129 Burkholderia pseudomallei MSHR346 7887943 YP_002895329.1 CDS aspS NC_012695.1 562186 563988 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 562186..563988 Burkholderia pseudomallei MSHR346 7888826 YP_002895330.1 CDS ntpA NC_012695.1 564198 564674 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 564198..564674 Burkholderia pseudomallei MSHR346 7889900 YP_002895331.1 CDS GBP346_A0605 NC_012695.1 564671 565945 D identified by match to protein family HMM PF00614; cardiolipin synthetase YbhO 564671..565945 Burkholderia pseudomallei MSHR346 7889816 YP_002895332.1 CDS GBP346_A0606 NC_012695.1 566135 566734 D identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 566135..566734 Burkholderia pseudomallei MSHR346 7890039 YP_002895333.1 CDS GBP346_A0607 NC_012695.1 566792 568579 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 566792..568579 Burkholderia pseudomallei MSHR346 7890518 YP_002895334.1 CDS GBP346_A0608 NC_012695.1 568737 571172 D identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 568737..571172 Burkholderia pseudomallei MSHR346 7889543 YP_002895335.1 CDS GBP346_A0609 NC_012695.1 571352 572551 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 571352..572551 Burkholderia pseudomallei MSHR346 7887011 YP_002895336.1 CDS GBP346_A0610 NC_012695.1 572568 573410 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 572568..573410 Burkholderia pseudomallei MSHR346 7888602 YP_002895337.1 CDS GBP346_A0611 NC_012695.1 573524 574348 R identified by match to protein family HMM PF02634; match to protein family HMM TIGR00129; formate dehydrogenase family accessory protein FdhD complement(573524..574348) Burkholderia pseudomallei MSHR346 7887500 YP_002895338.1 CDS GBP346_A0612 NC_012695.1 574504 574962 D identified by match to protein family HMM PF09655; match to protein family HMM TIGR02664; hypothetical protein 574504..574962 Burkholderia pseudomallei MSHR346 7886968 YP_002895339.1 CDS GBP346_A0613 NC_012695.1 575022 575420 R identified by match to protein family HMM PF03061; thioesterase family protein complement(575022..575420) Burkholderia pseudomallei MSHR346 7888183 YP_002895340.1 CDS GBP346_A0614 NC_012695.1 575466 575702 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; thioesterase domain protein complement(575466..575702) Burkholderia pseudomallei MSHR346 7890215 YP_002895341.1 CDS GBP346_A0615 NC_012695.1 575742 577613 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; efflux ABC transporter, heavy metal transporter (HMT) family, permease/ATP-binding protein 575742..577613 Burkholderia pseudomallei MSHR346 7890632 YP_002895342.1 CDS GBP346_A0616 NC_012695.1 577625 577813 D hypothetical protein 577625..577813 Burkholderia pseudomallei MSHR346 7887612 YP_002895343.1 CDS GBP346_A0617 NC_012695.1 578106 578825 R identified by match to protein family HMM PF00483; nucleotidyltransferase family protein complement(578106..578825) Burkholderia pseudomallei MSHR346 7890834 YP_002895344.1 CDS GBP346_A0618 NC_012695.1 578829 579863 R identified by match to protein family HMM PF01636; phosphotransferase family protein complement(578829..579863) Burkholderia pseudomallei MSHR346 7887302 YP_002895345.1 CDS GBP346_A0619 NC_012695.1 580076 582439 D identified by match to protein family HMM PF04453; organic solvent tolerance protein 580076..582439 Burkholderia pseudomallei MSHR346 7888895 YP_002895346.1 CDS GBP346_A0620 NC_012695.1 582500 583852 D identified by match to protein family HMM PF00639; match to protein family HMM PF09312; chaperone SurA 582500..583852 Burkholderia pseudomallei MSHR346 7890096 YP_002895347.1 CDS pdxA NC_012695.1 583874 584923 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 583874..584923 Burkholderia pseudomallei MSHR346 7886965 YP_002895348.1 CDS ksgA NC_012695.1 584955 585782 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 584955..585782 Burkholderia pseudomallei MSHR346 7887636 YP_002895349.1 CDS GBP346_A0623 NC_012695.1 586049 586987 R identified by match to protein family HMM PF00892; hypothetical protein complement(586049..586987) Burkholderia pseudomallei MSHR346 7889025 YP_002895350.1 CDS GBP346_A0625 NC_012695.1 587038 587754 D identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068; lactoylglutathione lyase (Methylglyoxalase)(Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) 587038..587754 Burkholderia pseudomallei MSHR346 7887689 YP_002895351.1 CDS GBP346_A0624 NC_012695.1 587748 587882 R hypothetical protein complement(587748..587882) Burkholderia pseudomallei MSHR346 7890063 YP_002895352.1 CDS GBP346_A0626 NC_012695.1 587967 588845 R identified by match to protein family HMM PF01863; hypothetical protein complement(587967..588845) Burkholderia pseudomallei MSHR346 7888715 YP_002895353.1 CDS GBP346_A0627 NC_012695.1 588893 589672 R identified by match to protein family HMM PF01553; phospholipid/glycerol acyltransferase complement(588893..589672) Burkholderia pseudomallei MSHR346 7887088 YP_002895354.1 CDS GBP346_A0628 NC_012695.1 589715 590278 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(589715..590278) Burkholderia pseudomallei MSHR346 7888512 YP_002895355.1 CDS glyS NC_012695.1 590296 592395 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(590296..592395) Burkholderia pseudomallei MSHR346 7887637 YP_002895356.1 CDS glyQ NC_012695.1 592412 593419 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(592412..593419) Burkholderia pseudomallei MSHR346 7887509 YP_002895357.1 CDS lnt NC_012695.1 593675 595381 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(593675..595381) Burkholderia pseudomallei MSHR346 7890146 YP_002895358.1 CDS GBP346_A0632 NC_012695.1 595424 596311 R identified by match to protein family HMM PF00571; match to protein family HMM PF03471; magnesium and cobalt efflux protein CorC complement(595424..596311) Burkholderia pseudomallei MSHR346 7889870 YP_002895359.1 CDS GBP346_A0633 NC_012695.1 596814 597446 R identified by match to protein family HMM PF04752; match to protein family HMM PF06094; ChaC family protein complement(596814..597446) Burkholderia pseudomallei MSHR346 7888416 YP_002895360.1 CDS GBP346_A0634 NC_012695.1 597467 598291 R contains unknown N-terminal domain/putative metalloprotease C-terminal domain; unkown domain/putative metalloprotease fusion protein complement(597467..598291) Burkholderia pseudomallei MSHR346 7890090 YP_002895361.1 CDS GBP346_A0635 NC_012695.1 598304 598621 D hypothetical protein 598304..598621 Burkholderia pseudomallei MSHR346 7890404 YP_002895362.1 CDS GBP346_A0636 NC_012695.1 598740 598895 D hypothetical protein 598740..598895 Burkholderia pseudomallei MSHR346 7887395 YP_002895363.1 CDS GBP346_A0637 NC_012695.1 599020 600084 R identified by match to protein family HMM PF02562; PhoH family protein complement(599020..600084) Burkholderia pseudomallei MSHR346 7888034 YP_002895364.1 CDS miaB NC_012695.1 600108 601481 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(600108..601481) Burkholderia pseudomallei MSHR346 7890947 YP_002895365.1 CDS GBP346_A0639 NC_012695.1 601533 601646 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(601533..601646) Burkholderia pseudomallei MSHR346 7889561 YP_002895366.1 CDS GBP346_A0640 NC_012695.1 601739 601945 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(601739..601945) Burkholderia pseudomallei MSHR346 7888004 YP_002895367.1 CDS GBP346_A0641 NC_012695.1 601942 602874 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(601942..602874) Burkholderia pseudomallei MSHR346 7890780 YP_002895368.1 CDS GBP346_A0642 NC_012695.1 603020 604192 D identified by match to protein family HMM PF07690; inner membrane transport protein YdhP 603020..604192 Burkholderia pseudomallei MSHR346 7886990 YP_002895369.1 CDS GBP346_A0643 NC_012695.1 604326 604994 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 604326..604994 Burkholderia pseudomallei MSHR346 7887710 YP_002895370.1 CDS ribB NC_012695.1 605418 606140 D identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 605418..606140 Burkholderia pseudomallei MSHR346 7890660 YP_002895371.1 CDS GBP346_A0646 NC_012695.1 606208 606894 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase, IA family protein complement(606208..606894) Burkholderia pseudomallei MSHR346 7887340 YP_002895372.1 CDS GBP346_A0647 NC_012695.1 607024 607890 R identified by match to protein family HMM PF00892; integral membrane protein DUF6 complement(607024..607890) Burkholderia pseudomallei MSHR346 7889291 YP_002895373.1 CDS GBP346_A0648 NC_012695.1 607967 609187 R identified by match to protein family HMM PF02655; ATP-grasp domain protein complement(607967..609187) Burkholderia pseudomallei MSHR346 7888835 YP_002895374.1 CDS asnB_1 NC_012695.1 609231 610763 R identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) complement(609231..610763) Burkholderia pseudomallei MSHR346 7890556 YP_002895375.1 CDS GBP346_A0650 NC_012695.1 610807 612162 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(610807..612162) Burkholderia pseudomallei MSHR346 7887623 YP_002895376.1 CDS GBP346_A0651 NC_012695.1 612201 613508 R identified by match to protein family HMM PF00275; 3-phosphoshikimate 1-carboxyvinyltransferase complement(612201..613508) Burkholderia pseudomallei MSHR346 7887023 YP_002895377.1 CDS GBP346_A0652 NC_012695.1 613530 614144 R identified by match to protein family HMM PF01042; endoribonuclease L-PSP complement(613530..614144) Burkholderia pseudomallei MSHR346 7888052 YP_002895378.1 CDS GBP346_A0653 NC_012695.1 614143 614634 D hypothetical protein 614143..614634 Burkholderia pseudomallei MSHR346 7887563 YP_002895379.1 CDS GBP346_A0654 NC_012695.1 614868 615584 R identified by match to protein family HMM PF00230; glycerol uptake facilitator protein complement(614868..615584) Burkholderia pseudomallei MSHR346 7887201 YP_002895380.1 CDS glpK NC_012695.1 615697 617253 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(615697..617253) Burkholderia pseudomallei MSHR346 7890209 YP_002895381.1 CDS glpD NC_012695.1 617305 618837 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(617305..618837) Burkholderia pseudomallei MSHR346 7886751 YP_002895382.1 CDS GBP346_A0657 NC_012695.1 619005 619376 D putative lipoprotein 619005..619376 Burkholderia pseudomallei MSHR346 7890676 YP_002895383.1 CDS GBP346_A0658 NC_012695.1 619443 619640 R hypothetical protein complement(619443..619640) Burkholderia pseudomallei MSHR346 7890889 YP_002895384.1 CDS GBP346_A0660 NC_012695.1 619761 619976 D hypothetical protein 619761..619976 Burkholderia pseudomallei MSHR346 7889609 YP_002895385.1 CDS glpR NC_012695.1 619961 620893 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; glycerol-3-phosphate regulon repressor complement(619961..620893) Burkholderia pseudomallei MSHR346 7889356 YP_002895386.1 CDS GBP346_A0661 NC_012695.1 620968 622641 D identified by match to protein family HMM PF01019; putative gamma-glutamyltransferase 620968..622641 Burkholderia pseudomallei MSHR346 7887666 YP_002895387.1 CDS GBP346_A0662 NC_012695.1 622830 622946 R identified by glimmer; putative; hypothetical protein complement(622830..622946) Burkholderia pseudomallei MSHR346 7888108 YP_002895388.1 CDS GBP346_A0663 NC_012695.1 622945 623778 D hypothetical protein 622945..623778 Burkholderia pseudomallei MSHR346 7886769 YP_002895389.1 CDS GBP346_A0664 NC_012695.1 623848 624348 D hypothetical protein 623848..624348 Burkholderia pseudomallei MSHR346 7888208 YP_002895390.1 CDS rhlE NC_012695.1 624486 625952 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE complement(624486..625952) Burkholderia pseudomallei MSHR346 7890606 YP_002895391.1 CDS GBP346_A0666 NC_012695.1 626080 627378 R identified by match to protein family HMM PF00034; cytochrome c family protein complement(626080..627378) Burkholderia pseudomallei MSHR346 7890222 YP_002895392.1 CDS GBP346_A0667 NC_012695.1 627398 628147 R cytochrome c, class I complement(627398..628147) Burkholderia pseudomallei MSHR346 7890866 YP_002895393.1 CDS GBP346_A0668 NC_012695.1 628336 628587 D hypothetical protein 628336..628587 Burkholderia pseudomallei MSHR346 7889492 YP_002895394.1 CDS GBP346_A0669 NC_012695.1 628584 629510 D identified by match to protein family HMM PF05425; copper resistance D 628584..629510 Burkholderia pseudomallei MSHR346 7889707 YP_002895395.1 CDS GBP346_A0670 NC_012695.1 630029 631177 R identified by match to protein family HMM PF01188; match to protein family HMM PF02746; galactonate dehydratase complement(630029..631177) Burkholderia pseudomallei MSHR346 7889790 YP_002895396.1 CDS GBP346_A0671 NC_012695.1 631625 631972 D identified by match to protein family HMM PF04828; glutathione-dependent formaldehyde-activating, GFA 631625..631972 Burkholderia pseudomallei MSHR346 7887138 YP_002895397.1 CDS GBP346_A0672 NC_012695.1 632104 632550 R hypothetical protein complement(632104..632550) Burkholderia pseudomallei MSHR346 7889905 YP_002895398.1 CDS GBP346_A0674 NC_012695.1 632846 634516 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; Ser/Thr protein phosphatase family protein 632846..634516 Burkholderia pseudomallei MSHR346 7889366 YP_002895399.1 CDS GBP346_A0673 NC_012695.1 634494 636377 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF03707; sensor histidine kinase complement(634494..636377) Burkholderia pseudomallei MSHR346 7890747 YP_002895400.1 CDS GBP346_A0675 NC_012695.1 636427 637872 R identified by match to protein family HMM PF00072; match to protein family HMM PF01966; response regulator complement(636427..637872) Burkholderia pseudomallei MSHR346 7888016 YP_002895401.1 CDS GBP346_A0676 NC_012695.1 637895 638080 R hypothetical protein complement(637895..638080) Burkholderia pseudomallei MSHR346 7887493 YP_002895402.1 CDS GBP346_A0677 NC_012695.1 638105 638386 D hypothetical protein 638105..638386 Burkholderia pseudomallei MSHR346 7890487 YP_002895403.1 CDS GBP346_A0678 NC_012695.1 638535 639116 D hypothetical protein 638535..639116 Burkholderia pseudomallei MSHR346 7887963 YP_002895404.1 CDS GBP346_A0679 NC_012695.1 639284 641035 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229; aerotaxis receptor complement(639284..641035) Burkholderia pseudomallei MSHR346 7890433 YP_002895405.1 CDS GBP346_A0680 NC_012695.1 641116 641691 R hypothetical protein complement(641116..641691) Burkholderia pseudomallei MSHR346 7889695 YP_002895406.1 CDS GBP346_A0681 NC_012695.1 641643 641807 D identified by glimmer; putative; hypothetical protein 641643..641807 Burkholderia pseudomallei MSHR346 7888207 YP_002895407.1 CDS GBP346_A0682 NC_012695.1 641935 643695 R identified by match to protein family HMM PF01565; match to protein family HMM PF04030; match to protein family HMM PF09129; putative oxidoreductase, FAD-binding complement(641935..643695) Burkholderia pseudomallei MSHR346 7890746 YP_002895408.1 CDS GBP346_A0683 NC_012695.1 643734 643970 D identified by glimmer; putative; hypothetical protein 643734..643970 Burkholderia pseudomallei MSHR346 7888499 YP_002895409.1 CDS GBP346_A0684 NC_012695.1 643967 645322 D identified by match to protein family HMM PF03466; transcriptional regulator, LysR family 643967..645322 Burkholderia pseudomallei MSHR346 7887711 YP_002895410.1 CDS ybbB NC_012695.1 645372 646451 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 645372..646451 Burkholderia pseudomallei MSHR346 7890153 YP_002895411.1 CDS GBP346_A0686 NC_012695.1 646476 646661 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(646476..646661) Burkholderia pseudomallei MSHR346 7889495 YP_002895412.1 CDS GBP346_A0687 NC_012695.1 646825 647013 R hypothetical protein complement(646825..647013) Burkholderia pseudomallei MSHR346 7889034 YP_002895413.1 CDS GBP346_A0688 NC_012695.1 647015 647149 D identified by glimmer; putative; hypothetical protein 647015..647149 Burkholderia pseudomallei MSHR346 7888043 YP_002895414.1 CDS GBP346_A0689 NC_012695.1 647146 647316 D identified by glimmer; putative; hypothetical protein 647146..647316 Burkholderia pseudomallei MSHR346 7889148 YP_002895415.1 CDS GBP346_A0690 NC_012695.1 647371 648687 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(647371..648687) Burkholderia pseudomallei MSHR346 7886914 YP_002895416.1 CDS GBP346_A0691 NC_012695.1 648753 650618 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(648753..650618) Burkholderia pseudomallei MSHR346 7888202 YP_002895417.1 CDS GBP346_A0692 NC_012695.1 650773 652248 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; protein-L-isoaspartate O-methyltransferase 650773..652248 Burkholderia pseudomallei MSHR346 7890047 YP_002895418.1 CDS GBP346_A0693 NC_012695.1 652203 652880 D hypothetical protein 652203..652880 Burkholderia pseudomallei MSHR346 7890103 YP_002895419.1 CDS pncB_1 NC_012695.1 652877 654232 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 652877..654232 Burkholderia pseudomallei MSHR346 7888219 YP_002895420.1 CDS GBP346_A0695 NC_012695.1 654383 655090 D identified by match to protein family HMM PF00156; phosphoribosyl transferase domain protein 654383..655090 Burkholderia pseudomallei MSHR346 7888398 YP_002895421.1 CDS GBP346_A0696 NC_012695.1 655138 658257 R identified by match to protein family HMM PF00912; glycosyl transferase family 51 complement(655138..658257) Burkholderia pseudomallei MSHR346 7889490 YP_002895422.1 CDS GBP346_A0697 NC_012695.1 658254 658679 R hypothetical protein complement(658254..658679) Burkholderia pseudomallei MSHR346 7888806 YP_002895423.1 CDS GBP346_A0698 NC_012695.1 658745 660184 R identified by match to protein family HMM PF00034; gluconate 2-dehydrogenase cytochrome c subunit complement(658745..660184) Burkholderia pseudomallei MSHR346 7887464 YP_002895424.1 CDS GBP346_A0699 NC_012695.1 660175 660807 R hypothetical protein complement(660175..660807) Burkholderia pseudomallei MSHR346 7888056 YP_002895425.1 CDS GBP346_A0700 NC_012695.1 660804 663494 R identified by match to protein family HMM PF00115; match to protein family HMM PF00510; match to protein family HMM TIGR02891; quinol oxidase subunit 1 (Quinol oxidase polypeptide I)(Quinol oxidase aa3-600, subunit QoxB) (Oxidase aa(3)-600 subunit 1) complement(660804..663494) Burkholderia pseudomallei MSHR346 7888574 YP_002895426.1 CDS GBP346_A0701 NC_012695.1 663511 664629 R identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM TIGR02866; cytochrome oxidase subunit II complement(663511..664629) Burkholderia pseudomallei MSHR346 7888276 YP_002895427.1 CDS GBP346_A0702 NC_012695.1 664682 666508 R identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine pyrophosphate protein complement(664682..666508) Burkholderia pseudomallei MSHR346 7889502 YP_002895428.1 CDS GBP346_A0703 NC_012695.1 666918 667994 D identified by match to protein family HMM PF01188; match to protein family HMM PF02746; mandelate racemase/muconate lactonizing enzyme 666918..667994 Burkholderia pseudomallei MSHR346 7890008 YP_002895429.1 CDS GBP346_A0704 NC_012695.1 667984 669003 D hypothetical protein 667984..669003 Burkholderia pseudomallei MSHR346 7890246 YP_002895430.1 CDS GBP346_A0705 NC_012695.1 669000 669836 D hypothetical protein 669000..669836 Burkholderia pseudomallei MSHR346 7888713 YP_002895431.1 CDS GBP346_A0706 NC_012695.1 669826 671517 D identified by match to protein family HMM PF00732; match to protein family HMM PF05199; GMC oxidoreductase 669826..671517 Burkholderia pseudomallei MSHR346 7889795 YP_002895432.1 CDS vasA_1 NC_012695.1 671564 673381 R identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family complement(671564..673381) Burkholderia pseudomallei MSHR346 7886861 YP_002895433.1 CDS GBP346_A0708 NC_012695.1 673434 673697 R hypothetical protein complement(673434..673697) Burkholderia pseudomallei MSHR346 7889635 YP_002895434.1 CDS GBP346_A0709 NC_012695.1 673936 674352 R regulatory protein, LuxR:Response regulator receiver complement(673936..674352) Burkholderia pseudomallei MSHR346 7888863 YP_002895435.1 CDS GBP346_A0710 NC_012695.1 674320 676710 D identified by match to protein family HMM PF01804; family S45 unassigned peptidase 674320..676710 Burkholderia pseudomallei MSHR346 7890102 YP_002895436.1 CDS GBP346_A0711 NC_012695.1 676740 678005 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 676740..678005 Burkholderia pseudomallei MSHR346 7889494 YP_002895437.1 CDS GBP346_A0712 NC_012695.1 678192 680027 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; signal transduction histidine kinase complement(678192..680027) Burkholderia pseudomallei MSHR346 7888184 YP_002895438.1 CDS GBP346_A0713 NC_012695.1 679997 680497 R identified by match to protein family HMM PF00174; oxidoreductase molybdopterin binding complement(679997..680497) Burkholderia pseudomallei MSHR346 7886971 YP_002895439.1 CDS GBP346_A0714 NC_012695.1 680524 681720 R identified by match to protein family HMM PF00072; match to protein family HMM PF08667; response regulator complement(680524..681720) Burkholderia pseudomallei MSHR346 7890821 YP_002895440.1 CDS GBP346_A0715 NC_012695.1 681728 681847 R hypothetical protein complement(681728..681847) Burkholderia pseudomallei MSHR346 7890524 YP_002895441.1 CDS GBP346_A0716 NC_012695.1 682125 682244 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Sel1 domain protein repeat-containing protein 682125..682244 Burkholderia pseudomallei MSHR346 7890767 YP_002895442.1 CDS GBP346_A0717 NC_012695.1 682506 682652 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(682506..682652) Burkholderia pseudomallei MSHR346 7888603 YP_002895443.1 CDS GBP346_A0718 NC_012695.1 683136 683291 R identified by glimmer; putative; hypothetical protein complement(683136..683291) Burkholderia pseudomallei MSHR346 7887435 YP_002895444.1 CDS GBP346_A0719 NC_012695.1 683877 685358 D identified by match to protein family HMM PF01609; ISBma2, transposase 683877..685358 Burkholderia pseudomallei MSHR346 7888152 YP_002895445.1 CDS GBP346_A0720 NC_012695.1 685462 686526 R SppA protein complement(685462..686526) Burkholderia pseudomallei MSHR346 7890558 YP_002895446.1 CDS GBP346_A0721 NC_012695.1 686502 686645 R identified by glimmer; putative; hypothetical protein complement(686502..686645) Burkholderia pseudomallei MSHR346 7888986 YP_002895447.1 CDS GBP346_A0722 NC_012695.1 687642 687770 D identified by glimmer; putative; hypothetical protein 687642..687770 Burkholderia pseudomallei MSHR346 7888669 YP_002895448.1 CDS GBP346_A0723 NC_012695.1 687862 688677 D identified by glimmer; putative; hypothetical protein 687862..688677 Burkholderia pseudomallei MSHR346 7889063 YP_002895449.1 CDS GBP346_A0724 NC_012695.1 688805 689437 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; hydrolase of HAD-superfamily complement(688805..689437) Burkholderia pseudomallei MSHR346 7890625 YP_002895450.1 CDS GBP346_A0725 NC_012695.1 689510 689998 R identified by glimmer; putative; hypothetical protein complement(689510..689998) Burkholderia pseudomallei MSHR346 7890513 YP_002895451.1 CDS GBP346_A0726 NC_012695.1 690411 690533 R identified by glimmer; putative; hypothetical protein complement(690411..690533) Burkholderia pseudomallei MSHR346 7889126 YP_002895452.1 CDS GBP346_A0727 NC_012695.1 691052 691654 R hypothetical protein complement(691052..691654) Burkholderia pseudomallei MSHR346 7890711 YP_002895453.1 CDS GBP346_A0728 NC_012695.1 691949 692131 R identified by glimmer; putative; hypothetical protein complement(691949..692131) Burkholderia pseudomallei MSHR346 7888679 YP_002895454.1 CDS GBP346_A0730 NC_012695.1 692807 692977 D identified by glimmer; putative; hypothetical protein 692807..692977 Burkholderia pseudomallei MSHR346 7889040 YP_002895455.1 CDS GBP346_A0729 NC_012695.1 692948 693997 R identified by match to protein family HMM PF00589; phage integrase family protein complement(692948..693997) Burkholderia pseudomallei MSHR346 7888966 YP_002895456.1 CDS GBP346_A0732 NC_012695.1 694256 694393 R identified by glimmer; putative; hypothetical protein complement(694256..694393) Burkholderia pseudomallei MSHR346 7889217 YP_002895457.1 CDS GBP346_A0733 NC_012695.1 694460 696118 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter complement(694460..696118) Burkholderia pseudomallei MSHR346 7889338 YP_002895458.1 CDS GBP346_A0734 NC_012695.1 696341 697897 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08521; two-component sensor kinase transcriptional regulatory protein complement(696341..697897) Burkholderia pseudomallei MSHR346 7890281 YP_002895459.1 CDS GBP346_A0735 NC_012695.1 697921 698742 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(697921..698742) Burkholderia pseudomallei MSHR346 7887545 YP_002895460.1 CDS recA NC_012695.1 698868 699938 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 698868..699938 Burkholderia pseudomallei MSHR346 7890422 YP_002895461.1 CDS recX NC_012695.1 699938 700921 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 699938..700921 Burkholderia pseudomallei MSHR346 7889517 YP_002895462.1 CDS GBP346_A0738 NC_012695.1 701066 701824 D hypothetical protein 701066..701824 Burkholderia pseudomallei MSHR346 7887748 YP_002895463.1 CDS sucC NC_012695.1 701904 703070 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 701904..703070 Burkholderia pseudomallei MSHR346 7887342 YP_002895464.1 CDS sucD NC_012695.1 703167 704096 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 703167..704096 Burkholderia pseudomallei MSHR346 7886948 YP_002895465.1 CDS GBP346_A0741 NC_012695.1 704247 704960 D identified by match to protein family HMM PF03741; integral membrane protein, TerC family 704247..704960 Burkholderia pseudomallei MSHR346 7888551 YP_002895466.1 CDS GBP346_A0742 NC_012695.1 705074 705697 D identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; putative type IV pilin protein PilA 705074..705697 Burkholderia pseudomallei MSHR346 7887507 YP_002895467.1 CDS GBP346_A0743 NC_012695.1 705935 707722 D identified by match to protein family HMM PF04932; O-antigen polymerase family protein 705935..707722 Burkholderia pseudomallei MSHR346 7888642 YP_002895468.1 CDS GBP346_A0744 NC_012695.1 707773 708321 D hypothetical protein 707773..708321 Burkholderia pseudomallei MSHR346 7889979 YP_002895469.1 CDS GBP346_A0745 NC_012695.1 708318 708791 D hypothetical protein 708318..708791 Burkholderia pseudomallei MSHR346 7888964 YP_002895470.1 CDS GBP346_A0746 NC_012695.1 708801 709010 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 708801..709010 Burkholderia pseudomallei MSHR346 7888423 YP_002895471.1 CDS GBP346_A0747 NC_012695.1 709027 709392 D identified by match to protein family HMM TIGR01352; TonB domain protein 709027..709392 Burkholderia pseudomallei MSHR346 7888340 YP_002895472.1 CDS moaC NC_012695.1 709589 710083 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(709589..710083) Burkholderia pseudomallei MSHR346 7888752 YP_002895473.1 CDS GBP346_A0749 NC_012695.1 710095 710238 R hypothetical protein complement(710095..710238) Burkholderia pseudomallei MSHR346 7890685 YP_002895474.1 CDS GBP346_A0750 NC_012695.1 710237 711955 D identified by match to protein family HMM PF01435; peptidase, M48 family 710237..711955 Burkholderia pseudomallei MSHR346 7886880 YP_002895475.1 CDS GBP346_A0751 NC_012695.1 712069 712221 R hypothetical protein complement(712069..712221) Burkholderia pseudomallei MSHR346 7888843 YP_002895476.1 CDS GBP346_A0752 NC_012695.1 712263 712886 R hypothetical protein complement(712263..712886) Burkholderia pseudomallei MSHR346 7890904 YP_002895477.1 CDS GBP346_A0753 NC_012695.1 712879 713913 R identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein complement(712879..713913) Burkholderia pseudomallei MSHR346 7889400 YP_002895478.1 CDS GBP346_A0754 NC_012695.1 713933 714379 R hypothetical protein complement(713933..714379) Burkholderia pseudomallei MSHR346 7887476 YP_002895479.1 CDS rfaF NC_012695.1 714511 715551 R identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195; lipopolysaccharide heptosyltransferase II complement(714511..715551) Burkholderia pseudomallei MSHR346 7888084 YP_002895480.1 CDS GBP346_A0756 NC_012695.1 715679 715876 R hypothetical protein complement(715679..715876) Burkholderia pseudomallei MSHR346 7887217 YP_002895481.1 CDS ilvE_1 NC_012695.1 715942 716865 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(715942..716865) Burkholderia pseudomallei MSHR346 7890759 YP_002895482.1 CDS GBP346_A0758 NC_012695.1 717087 717836 D identified by match to protein family HMM PF03591; AzlC family protein 717087..717836 Burkholderia pseudomallei MSHR346 7888299 YP_002895483.1 CDS GBP346_A0759 NC_012695.1 717833 718156 D identified by match to protein family HMM PF05437; branched-chain amino acid transport 717833..718156 Burkholderia pseudomallei MSHR346 7889601 YP_002895484.1 CDS pgk NC_012695.1 718288 719616 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 718288..719616 Burkholderia pseudomallei MSHR346 7889250 YP_002895485.1 CDS GBP346_A0761 NC_012695.1 719697 719972 D hypothetical protein 719697..719972 Burkholderia pseudomallei MSHR346 7890880 YP_002895486.1 CDS pyk_1 NC_012695.1 719951 721387 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 719951..721387 Burkholderia pseudomallei MSHR346 7889608 YP_002895487.1 CDS fba NC_012695.1 721668 722732 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 721668..722732 Burkholderia pseudomallei MSHR346 7888371 YP_002895488.1 CDS purC NC_012695.1 722922 723812 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 722922..723812 Burkholderia pseudomallei MSHR346 7887767 YP_002895489.1 CDS purE NC_012695.1 723848 724366 D identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit 723848..724366 Burkholderia pseudomallei MSHR346 7887336 YP_002895490.1 CDS purK NC_012695.1 724446 725642 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 724446..725642 Burkholderia pseudomallei MSHR346 7890507 YP_002895491.1 CDS GBP346_A0767 NC_012695.1 725654 726679 D identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC family protein 725654..726679 Burkholderia pseudomallei MSHR346 7889873 YP_002895492.1 CDS GBP346_A0768 NC_012695.1 726925 728064 R lipolytic protein G-D-S-L family complement(726925..728064) Burkholderia pseudomallei MSHR346 7889220 YP_002895493.1 CDS GBP346_A0769 NC_012695.1 728169 729086 R identified by match to protein family HMM PF04116; sterol desaturase family protein complement(728169..729086) Burkholderia pseudomallei MSHR346 7887747 YP_002895494.1 CDS GBP346_A0770 NC_012695.1 729295 729546 R identified by glimmer; putative; hypothetical protein complement(729295..729546) Burkholderia pseudomallei MSHR346 7889690 YP_002895495.1 CDS dacB NC_012695.1 729522 731099 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(729522..731099) Burkholderia pseudomallei MSHR346 7887326 YP_002895496.1 CDS GBP346_A0772 NC_012695.1 731070 731258 D identified by glimmer; putative; hypothetical protein 731070..731258 Burkholderia pseudomallei MSHR346 7890198 YP_002895497.1 CDS GBP346_A0773 NC_012695.1 731092 731901 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 731092..731901 Burkholderia pseudomallei MSHR346 7890654 YP_002895498.1 CDS GBP346_A0774 NC_012695.1 731905 733221 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 731905..733221 Burkholderia pseudomallei MSHR346 7887323 YP_002895499.1 CDS GBP346_A0775 NC_012695.1 733357 733626 D hypothetical protein 733357..733626 Burkholderia pseudomallei MSHR346 7888792 YP_002895500.1 CDS GBP346_A0776 NC_012695.1 733683 735170 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease 733683..735170 Burkholderia pseudomallei MSHR346 7887367 YP_002895501.1 CDS GBP346_A0777 NC_012695.1 735330 735752 D hypothetical protein 735330..735752 Burkholderia pseudomallei MSHR346 7888284 YP_002895502.1 CDS GBP346_A0778 NC_012695.1 735880 736245 D identified by match to protein family HMM PF04248; outer membrane protein 735880..736245 Burkholderia pseudomallei MSHR346 7889828 YP_002895503.1 CDS GBP346_A0779 NC_012695.1 736273 737001 D identified by match to protein family HMM PF06240; carbon monoxide dehydrogenase family protein 736273..737001 Burkholderia pseudomallei MSHR346 7886879 YP_002895504.1 CDS GBP346_A0780 NC_012695.1 737328 737963 R identified by match to protein family HMM PF00440; match to protein family HMM PF08361; multidrug efflux pump repressor protein BpeR complement(737328..737963) Burkholderia pseudomallei MSHR346 7890663 YP_002895505.1 CDS GBP346_A0781 NC_012695.1 738207 738353 D hypothetical protein 738207..738353 Burkholderia pseudomallei MSHR346 7886904 YP_002895506.1 CDS GBP346_A0782 NC_012695.1 738373 739635 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; periplasmic linker protein 738373..739635 Burkholderia pseudomallei MSHR346 7890697 YP_002895507.1 CDS GBP346_A0783 NC_012695.1 739651 742851 D identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; AcrB protein 739651..742851 Burkholderia pseudomallei MSHR346 7887379 YP_002895508.1 CDS GBP346_A0784 NC_012695.1 742855 744399 D identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane protein OprM 742855..744399 Burkholderia pseudomallei MSHR346 7890224 YP_002895509.1 CDS GBP346_A0786 NC_012695.1 744487 744699 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 744487..744699 Burkholderia pseudomallei MSHR346 7887560 YP_002895510.1 CDS GBP346_A0785 NC_012695.1 744678 744902 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(744678..744902) Burkholderia pseudomallei MSHR346 7890807 YP_002895511.1 CDS GBP346_A0787 NC_012695.1 744990 746363 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease complement(744990..746363) Burkholderia pseudomallei MSHR346 7890446 YP_002895512.1 CDS GBP346_A0788 NC_012695.1 746764 748188 D identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, FGGY family 746764..748188 Burkholderia pseudomallei MSHR346 7889863 YP_002895513.1 CDS GBP346_A0789 NC_012695.1 748448 749482 R identified by match to protein family HMM PF00165; match to protein family HMM PF01965; transcriptional regulator, AraC family complement(748448..749482) Burkholderia pseudomallei MSHR346 7889308 YP_002895514.1 CDS GBP346_A0790 NC_012695.1 749687 750793 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02818; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 749687..750793 Burkholderia pseudomallei MSHR346 7890316 YP_002895515.1 CDS fghA NC_012695.1 750807 751667 D identified by match to protein family HMM PF00756; match to protein family HMM TIGR02821; S-formylglutathione hydrolase 750807..751667 Burkholderia pseudomallei MSHR346 7888040 YP_002895516.1 CDS GBP346_A0792 NC_012695.1 751812 752636 R identified by match to protein family HMM PF00950; ABC-3 protein complement(751812..752636) Burkholderia pseudomallei MSHR346 7887571 YP_002895517.1 CDS GBP346_A0793 NC_012695.1 752596 753456 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(752596..753456) Burkholderia pseudomallei MSHR346 7890465 YP_002895518.1 CDS GBP346_A0794 NC_012695.1 753491 754453 R identified by match to protein family HMM PF01297; putative cation ABC transporter, periplasmic cation-binding protein complement(753491..754453) Burkholderia pseudomallei MSHR346 7887909 YP_002895519.1 CDS GBP346_A0795 NC_012695.1 754643 755107 R identified by match to protein family HMM PF01475; transcriptional regulator, Fur family complement(754643..755107) Burkholderia pseudomallei MSHR346 7889031 YP_002895520.1 CDS GBP346_A0796 NC_012695.1 755246 755404 D identified by glimmer; putative; hypothetical protein 755246..755404 Burkholderia pseudomallei MSHR346 7890049 YP_002895521.1 CDS GBP346_A0797 NC_012695.1 755359 756177 D Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 755359..756177 Burkholderia pseudomallei MSHR346 7889369 YP_002895522.1 CDS GBP346_A0798 NC_012695.1 756182 757138 D identified by match to protein family HMM PF00294; kinase, PfkB family 756182..757138 Burkholderia pseudomallei MSHR346 7886956 YP_002895523.1 CDS GBP346_A0799 NC_012695.1 757126 758598 D identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810; D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 757126..758598 Burkholderia pseudomallei MSHR346 7889275 YP_002895524.1 CDS GBP346_A0800 NC_012695.1 758649 759977 D identified by match to protein family HMM PF01547; mannitol ABC transporter, periplasmic mannitol-binding protein 758649..759977 Burkholderia pseudomallei MSHR346 7889928 YP_002895525.1 CDS GBP346_A0801 NC_012695.1 759974 761029 D identified by match to protein family HMM PF00528; putative sorbitol/mannitol ABC transporter, permease protein 759974..761029 Burkholderia pseudomallei MSHR346 7888026 YP_002895526.1 CDS GBP346_A0802 NC_012695.1 761026 761892 D identified by match to protein family HMM PF00528; mannitol ABC transporter, permease protein 761026..761892 Burkholderia pseudomallei MSHR346 7887519 YP_002895527.1 CDS GBP346_A0803 NC_012695.1 761889 762587 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase, subfamily IA, variant 3 761889..762587 Burkholderia pseudomallei MSHR346 7888417 YP_002895528.1 CDS GBP346_A0805 NC_012695.1 762648 763760 D identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; lactose transport ATP-binding protein LacK 762648..763760 Burkholderia pseudomallei MSHR346 7887970 YP_002895529.1 CDS GBP346_A0804 NC_012695.1 763726 763950 R identified by glimmer; putative; hypothetical protein complement(763726..763950) Burkholderia pseudomallei MSHR346 7887112 YP_002895530.1 CDS GBP346_A0806 NC_012695.1 763947 765500 R identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain protein complement(763947..765500) Burkholderia pseudomallei MSHR346 7889806 YP_002895531.1 CDS GBP346_A0807 NC_012695.1 765645 766529 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(765645..766529) Burkholderia pseudomallei MSHR346 7889894 YP_002895532.1 CDS GBP346_A0808 NC_012695.1 766667 767863 D identified by match to protein family HMM PF00144; beta-lactamase 766667..767863 Burkholderia pseudomallei MSHR346 7889304 YP_002895533.1 CDS GBP346_A0809 NC_012695.1 767860 769071 D identified by match to protein family HMM PF07690; major facilitator family transporter 767860..769071 Burkholderia pseudomallei MSHR346 7887343 YP_002895534.1 CDS GBP346_A0810 NC_012695.1 769233 770180 R identified by match to protein family HMM PF04198; putative transcriptional regulator complement(769233..770180) Burkholderia pseudomallei MSHR346 7890217 YP_002895535.1 CDS xylB_1 NC_012695.1 770267 771748 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; xylulokinase complement(770267..771748) Burkholderia pseudomallei MSHR346 7888801 YP_002895536.1 CDS GBP346_A0812 NC_012695.1 771785 773302 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01232; match to protein family HMM PF08125; D-arabinitol 4-dehydrogenase complement(771785..773302) Burkholderia pseudomallei MSHR346 7889471 YP_002895537.1 CDS GBP346_A0813 NC_012695.1 773474 774490 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(773474..774490) Burkholderia pseudomallei MSHR346 7886785 YP_002895538.1 CDS GBP346_A0814 NC_012695.1 774489 776108 D catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 774489..776108 Burkholderia pseudomallei MSHR346 7890267 YP_002895539.1 CDS GBP346_A0815 NC_012695.1 776244 777695 D identified by match to protein family HMM PF00171; salicylaldehyde dehydrogenase 776244..777695 Burkholderia pseudomallei MSHR346 7889006 YP_002895540.1 CDS panE_1 NC_012695.1 777700 778656 D identified by match to protein family HMM PF02558; match to protein family HMM PF03721; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 777700..778656 Burkholderia pseudomallei MSHR346 7887899 YP_002895541.1 CDS GBP346_A0817 NC_012695.1 779134 779322 R hypothetical protein complement(779134..779322) Burkholderia pseudomallei MSHR346 7887574 YP_002895542.1 CDS GBP346_A0818 NC_012695.1 779332 780786 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 779332..780786 Burkholderia pseudomallei MSHR346 7888576 YP_002895543.1 CDS kynA NC_012695.1 780812 781747 R identified by match to protein family HMM PF03301; match to protein family HMM TIGR03036; tryptophan 2,3-dioxygenase complement(780812..781747) Burkholderia pseudomallei MSHR346 7886835 YP_002895544.1 CDS kynU NC_012695.1 781831 783081 R identified by match to protein family HMM PF00266; match to protein family HMM TIGR01814; kynureninase complement(781831..783081) Burkholderia pseudomallei MSHR346 7889100 YP_002895545.1 CDS kynB NC_012695.1 783123 783851 R identified by match to protein family HMM PF04199; match to protein family HMM TIGR03035; arylformamidase complement(783123..783851) Burkholderia pseudomallei MSHR346 7890542 YP_002895546.1 CDS GBP346_A0823 NC_012695.1 783894 784397 D identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 783894..784397 Burkholderia pseudomallei MSHR346 7890028 YP_002895547.1 CDS GBP346_A0822 NC_012695.1 784384 784899 R identified by match to protein family HMM PF01613; flavin reductase domain protein complement(784384..784899) Burkholderia pseudomallei MSHR346 7887633 YP_002895548.1 CDS GBP346_A0824 NC_012695.1 784968 785831 D identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide-methionine (S)-S-oxide reductase 784968..785831 Burkholderia pseudomallei MSHR346 7890872 YP_002895549.1 CDS GBP346_A0825 NC_012695.1 785877 786218 R 2',5' RNA ligase complement(785877..786218) Burkholderia pseudomallei MSHR346 7887048 YP_002895550.1 CDS GBP346_A0826 NC_012695.1 786188 787747 R identified by match to protein family HMM PF01904; hypothetical protein complement(786188..787747) Burkholderia pseudomallei MSHR346 7889595 YP_002895551.1 CDS GBP346_A0827 NC_012695.1 787774 788994 R identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase complement(787774..788994) Burkholderia pseudomallei MSHR346 7890064 YP_002895552.1 CDS pdxH NC_012695.1 789126 789770 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(789126..789770) Burkholderia pseudomallei MSHR346 7889983 YP_002895553.1 CDS GBP346_A0829 NC_012695.1 789904 790770 D identified by match to protein family HMM PF00899; ThiF family protein 789904..790770 Burkholderia pseudomallei MSHR346 7887969 YP_002895554.1 CDS GBP346_A0830 NC_012695.1 791043 791891 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(791043..791891) Burkholderia pseudomallei MSHR346 7890806 YP_002895555.1 CDS GBP346_A0831 NC_012695.1 791945 792826 R identified by match to protein family HMM PF02678; match to protein family HMM PF05726; pirin domain protein complement(791945..792826) Burkholderia pseudomallei MSHR346 7887244 YP_002895556.1 CDS GBP346_A0832 NC_012695.1 793011 793895 D identified by match to protein family HMM PF00892; probable amino-acid metabolite efflux pump 793011..793895 Burkholderia pseudomallei MSHR346 7886737 YP_002895557.1 CDS GBP346_A0833 NC_012695.1 794112 794231 D hypothetical protein 794112..794231 Burkholderia pseudomallei MSHR346 7890324 YP_002895558.1 CDS GBP346_A0834 NC_012695.1 794431 795987 R identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase AmiC complement(794431..795987) Burkholderia pseudomallei MSHR346 7887111 YP_002895559.1 CDS GBP346_A0835 NC_012695.1 795969 796523 R identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein complement(795969..796523) Burkholderia pseudomallei MSHR346 7889976 YP_002895560.1 CDS GBP346_A0836 NC_012695.1 796541 797770 D identified by match to protein family HMM PF08331; match to protein family HMM TIGR00276; putative iron-sulfur cluster-binding protein 796541..797770 Burkholderia pseudomallei MSHR346 7887848 YP_002895561.1 CDS GBP346_A0837 NC_012695.1 797841 798308 D identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA-protein-cysteine S-methyltransferase 797841..798308 Burkholderia pseudomallei MSHR346 7890591 YP_002895562.1 CDS xerD NC_012695.1 798308 799309 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 798308..799309 Burkholderia pseudomallei MSHR346 7890136 YP_002895563.1 CDS GBP346_A0839 NC_012695.1 799594 801306 R identified by match to protein family HMM PF00501; AMP-binding protein complement(799594..801306) Burkholderia pseudomallei MSHR346 7890282 YP_002895564.1 CDS ybaK NC_012695.1 801289 801780 D identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/ebsC protein 801289..801780 Burkholderia pseudomallei MSHR346 7886788 YP_002895565.1 CDS GBP346_A0841 NC_012695.1 801889 802500 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 801889..802500 Burkholderia pseudomallei MSHR346 7887825 YP_002895566.1 CDS GBP346_A0842 NC_012695.1 802730 803215 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(802730..803215) Burkholderia pseudomallei MSHR346 7887569 YP_002895567.1 CDS murB NC_012695.1 803358 804401 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 803358..804401 Burkholderia pseudomallei MSHR346 7887299 YP_002895568.1 CDS argF_1 NC_012695.1 804587 805516 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(804587..805516) Burkholderia pseudomallei MSHR346 7886709 YP_002895569.1 CDS GBP346_A0845 NC_012695.1 805942 806265 D hypothetical protein 805942..806265 Burkholderia pseudomallei MSHR346 7889373 YP_002895570.1 CDS rpsT NC_012695.1 806494 806772 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(806494..806772) Burkholderia pseudomallei MSHR346 7889664 YP_002895571.1 CDS mviN NC_012695.1 806949 808727 D identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 806949..808727 Burkholderia pseudomallei MSHR346 7888150 YP_002895572.1 CDS GBP346_A0848 NC_012695.1 808737 809579 D hypothetical protein 808737..809579 Burkholderia pseudomallei MSHR346 7888352 YP_002895573.1 CDS GBP346_A0849 NC_012695.1 809848 810807 R identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family complement(809848..810807) Burkholderia pseudomallei MSHR346 7887317 YP_002895574.1 CDS adk NC_012695.1 810804 811466 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(810804..811466) Burkholderia pseudomallei MSHR346 7888867 YP_002895575.1 CDS kdsB NC_012695.1 811675 812466 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(811675..812466) Burkholderia pseudomallei MSHR346 7887625 YP_002895576.1 CDS GBP346_A0852 NC_012695.1 812640 812846 R identified by match to protein family HMM PF03966; tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) complement(812640..812846) Burkholderia pseudomallei MSHR346 7889005 YP_002895577.1 CDS lpxK NC_012695.1 812827 813957 R Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase complement(812827..813957) Burkholderia pseudomallei MSHR346 7887075 YP_002895578.1 CDS GBP346_A0854 NC_012695.1 814081 814311 R hypothetical protein complement(814081..814311) Burkholderia pseudomallei MSHR346 7888797 YP_002895579.1 CDS xseA NC_012695.1 814306 815688 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 814306..815688 Burkholderia pseudomallei MSHR346 7889221 YP_002895580.1 CDS GBP346_A0856 NC_012695.1 815885 816463 D identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase (Fe) 815885..816463 Burkholderia pseudomallei MSHR346 7888534 YP_002895581.1 CDS GBP346_A0857 NC_012695.1 816733 818166 D putative lipoprotein 816733..818166 Burkholderia pseudomallei MSHR346 7890489 YP_002895582.1 CDS GBP346_A0858 NC_012695.1 818331 818546 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 818331..818546 Burkholderia pseudomallei MSHR346 7889871 YP_002895583.1 CDS GBP346_A0859 NC_012695.1 819044 820249 R identified by match to protein family HMM PF02417; match to protein family HMM TIGR00937; chromate transporter, chromate ion transporter complement(819044..820249) Burkholderia pseudomallei MSHR346 7887892 YP_002895584.1 CDS GBP346_A0860 NC_012695.1 820465 821211 R identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein complement(820465..821211) Burkholderia pseudomallei MSHR346 7889050 YP_002895585.1 CDS GBP346_A0861 NC_012695.1 821296 821823 D identified by match to protein family HMM PF06127; hypothetical protein 821296..821823 Burkholderia pseudomallei MSHR346 7886974 YP_002895586.1 CDS panE_2 NC_012695.1 821839 822861 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 821839..822861 Burkholderia pseudomallei MSHR346 7889570 YP_002895587.1 CDS GBP346_A0863 NC_012695.1 823034 823207 R identified by glimmer; putative; hypothetical protein complement(823034..823207) Burkholderia pseudomallei MSHR346 7888697 YP_002895588.1 CDS GBP346_A0864 NC_012695.1 823354 823959 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 823354..823959 Burkholderia pseudomallei MSHR346 7887691 YP_002895589.1 CDS GBP346_A0865 NC_012695.1 824091 825359 R identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase complement(824091..825359) Burkholderia pseudomallei MSHR346 7888648 YP_002895590.1 CDS GBP346_A0866 NC_012695.1 825420 825554 D hypothetical protein 825420..825554 Burkholderia pseudomallei MSHR346 7889995 YP_002895591.1 CDS GBP346_A0867 NC_012695.1 826038 827435 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family complement(826038..827435) Burkholderia pseudomallei MSHR346 7890032 YP_002895592.1 CDS GBP346_A0869 NC_012695.1 827774 828109 D hypothetical protein 827774..828109 Burkholderia pseudomallei MSHR346 7890105 YP_002895593.1 CDS GBP346_A0868 NC_012695.1 828082 829443 R identified by match to protein family HMM PF00285; match to protein family HMM PF00376; citrate synthase family protein complement(828082..829443) Burkholderia pseudomallei MSHR346 7886896 YP_002895594.1 CDS GBP346_A0870 NC_012695.1 829411 829569 D hypothetical protein 829411..829569 Burkholderia pseudomallei MSHR346 7888559 YP_002895595.1 CDS GBP346_A0871 NC_012695.1 829584 829727 R hypothetical protein complement(829584..829727) Burkholderia pseudomallei MSHR346 7889592 YP_002895596.1 CDS GBP346_A0872 NC_012695.1 829781 829972 D hypothetical protein 829781..829972 Burkholderia pseudomallei MSHR346 7890884 YP_002895597.1 CDS GBP346_A0874 NC_012695.1 829969 830190 D hypothetical protein 829969..830190 Burkholderia pseudomallei MSHR346 7887331 YP_002895598.1 CDS GBP346_A0873 NC_012695.1 830160 830906 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; transcriptional regulator, GntR family complement(830160..830906) Burkholderia pseudomallei MSHR346 7889296 YP_002895599.1 CDS GBP346_A0875 NC_012695.1 831060 831920 D identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 831060..831920 Burkholderia pseudomallei MSHR346 7890444 YP_002895600.1 CDS GBP346_A0876 NC_012695.1 831984 832160 D identified by glimmer; putative; hypothetical protein 831984..832160 Burkholderia pseudomallei MSHR346 7887239 YP_002895601.1 CDS GBP346_A0877 NC_012695.1 832221 832412 D hypothetical protein 832221..832412 Burkholderia pseudomallei MSHR346 7888770 YP_002895602.1 CDS GBP346_A0878 NC_012695.1 832440 834347 D hypothetical protein 832440..834347 Burkholderia pseudomallei MSHR346 7889803 YP_002895603.1 CDS GBP346_A0879 NC_012695.1 834302 834955 D hypothetical protein 834302..834955 Burkholderia pseudomallei MSHR346 7887020 YP_002895604.1 CDS fusA_1 NC_012695.1 835404 837518 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(835404..837518) Burkholderia pseudomallei MSHR346 7887594 YP_002895605.1 CDS GBP346_A0881 NC_012695.1 837643 837831 R identified by glimmer; putative; hypothetical protein complement(837643..837831) Burkholderia pseudomallei MSHR346 7888742 YP_002895606.1 CDS GBP346_A0882 NC_012695.1 837828 838337 R identified by match to protein family HMM PF02643; exported protein complement(837828..838337) Burkholderia pseudomallei MSHR346 7887470 YP_002895607.1 CDS GBP346_A0883 NC_012695.1 839011 839589 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase E complement(839011..839589) Burkholderia pseudomallei MSHR346 7887844 YP_002895608.1 CDS icd NC_012695.1 839857 841116 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 839857..841116 Burkholderia pseudomallei MSHR346 7890388 YP_002895609.1 CDS GBP346_A0884 NC_012695.1 841089 841271 R hypothetical protein complement(841089..841271) Burkholderia pseudomallei MSHR346 7888246 YP_002895610.1 CDS GBP346_A0886 NC_012695.1 841284 842900 D identified by match to protein family HMM PF07731; match to protein family HMM PF07732; multicopper oxidase family protein 841284..842900 Burkholderia pseudomallei MSHR346 7889766 YP_002895611.1 CDS GBP346_A0887 NC_012695.1 843030 843233 R identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein complement(843030..843233) Burkholderia pseudomallei MSHR346 7889473 YP_002895612.1 CDS clpS NC_012695.1 843766 844080 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 843766..844080 Burkholderia pseudomallei MSHR346 7887804 YP_002895613.1 CDS clpA NC_012695.1 844077 846377 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease ATP-binding subunit ClpA 844077..846377 Burkholderia pseudomallei MSHR346 7888343 YP_002895614.1 CDS GBP346_A0890 NC_012695.1 846477 847856 D identified by match to protein family HMM PF00324; phenylalanine-specific permease 846477..847856 Burkholderia pseudomallei MSHR346 7887465 YP_002895615.1 CDS GBP346_A0891 NC_012695.1 847944 848678 D hypothetical protein 847944..848678 Burkholderia pseudomallei MSHR346 7888203 YP_002895616.1 CDS GBP346_A0892 NC_012695.1 848843 849625 D identified by match to protein family HMM PF03988; hypothetical protein 848843..849625 Burkholderia pseudomallei MSHR346 7886849 YP_002895617.1 CDS dut NC_012695.1 849714 850160 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(849714..850160) Burkholderia pseudomallei MSHR346 7889564 YP_002895618.1 CDS coaBC NC_012695.1 850224 851435 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(850224..851435) Burkholderia pseudomallei MSHR346 7888444 YP_002895619.1 CDS lspA NC_012695.1 851497 851997 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(851497..851997) Burkholderia pseudomallei MSHR346 7887145 YP_002895620.1 CDS ileS NC_012695.1 851997 854834 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(851997..854834) Burkholderia pseudomallei MSHR346 7888090 YP_002895621.1 CDS ribF NC_012695.1 854946 855983 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(854946..855983) Burkholderia pseudomallei MSHR346 7889607 YP_002895622.1 CDS purN NC_012695.1 856063 856725 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 856063..856725 Burkholderia pseudomallei MSHR346 7889759 YP_002895623.1 CDS GBP346_A0899 NC_012695.1 856722 857984 D identified by match to protein family HMM PF01189; rRNA small subunit methyltransferase B 856722..857984 Burkholderia pseudomallei MSHR346 7889427 YP_002895624.1 CDS GBP346_A0900 NC_012695.1 857996 859339 D identified by match to protein family HMM PF00924; transporter, small conductance mechanosensitive ion channel 857996..859339 Burkholderia pseudomallei MSHR346 7887934 YP_002895625.1 CDS GBP346_A0901 NC_012695.1 859545 860741 D identified by match to protein family HMM PF00487; fatty acid desaturase family protein 859545..860741 Burkholderia pseudomallei MSHR346 7890579 YP_002895626.1 CDS GBP346_A0902 NC_012695.1 860778 860915 R hypothetical protein complement(860778..860915) Burkholderia pseudomallei MSHR346 7888333 YP_002895627.1 CDS nadA NC_012695.1 860910 862046 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 860910..862046 Burkholderia pseudomallei MSHR346 7887836 YP_002895628.1 CDS nadC NC_012695.1 862043 862927 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 862043..862927 Burkholderia pseudomallei MSHR346 7889883 YP_002895629.1 CDS nadB NC_012695.1 863120 864832 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(863120..864832) Burkholderia pseudomallei MSHR346 7890394 YP_002895630.1 CDS rpmG NC_012695.1 864889 865056 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(864889..865056) Burkholderia pseudomallei MSHR346 7890177 YP_002895631.1 CDS rpmB NC_012695.1 865074 865565 R identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; ribosomal protein L28 complement(865074..865565) Burkholderia pseudomallei MSHR346 7889968 YP_002895632.1 CDS radC NC_012695.1 865601 866443 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(865601..866443) Burkholderia pseudomallei MSHR346 7886855 YP_002895633.1 CDS GBP346_A0909 NC_012695.1 866582 867037 D identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase, fkbp-type 866582..867037 Burkholderia pseudomallei MSHR346 7889262 YP_002895634.1 CDS ispH NC_012695.1 867040 868020 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 867040..868020 Burkholderia pseudomallei MSHR346 7889779 YP_002895635.1 CDS GBP346_A0911 NC_012695.1 868310 868798 D hypothetical protein 868310..868798 Burkholderia pseudomallei MSHR346 7888206 YP_002895636.1 CDS GBP346_A0912 NC_012695.1 869021 869971 D identified by match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter 869021..869971 Burkholderia pseudomallei MSHR346 7889805 YP_002895637.1 CDS GBP346_A0913 NC_012695.1 869982 871151 D identified by match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter 869982..871151 Burkholderia pseudomallei MSHR346 7888290 YP_002895638.1 CDS GBP346_A0914 NC_012695.1 871214 871987 D identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein 871214..871987 Burkholderia pseudomallei MSHR346 7889980 YP_002895639.1 CDS GBP346_A0915 NC_012695.1 871999 872703 D identified by match to protein family HMM PF00005; abc transporter, hydrophobic amino acid uptake transporter (haat) family, ATP-binding protein 871999..872703 Burkholderia pseudomallei MSHR346 7888225 YP_002895640.1 CDS GBP346_A0916 NC_012695.1 872748 873680 D hypothetical protein 872748..873680 Burkholderia pseudomallei MSHR346 7890188 YP_002895641.1 CDS GBP346_A0917 NC_012695.1 873807 874265 R identified by match to protein family HMM PF00583; putative acetyltransferase complement(873807..874265) Burkholderia pseudomallei MSHR346 7887226 YP_002895642.1 CDS argD NC_012695.1 874282 875466 R DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein complement(874282..875466) Burkholderia pseudomallei MSHR346 7887776 YP_002895643.1 CDS GBP346_A0919 NC_012695.1 875743 876774 R catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase complement(875743..876774) Burkholderia pseudomallei MSHR346 7889515 YP_002895644.1 CDS GBP346_A0921 NC_012695.1 876803 877882 D identified by match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 876803..877882 Burkholderia pseudomallei MSHR346 7890355 YP_002895645.1 CDS GBP346_A0920 NC_012695.1 877875 878147 R hypothetical protein complement(877875..878147) Burkholderia pseudomallei MSHR346 7888234 YP_002895646.1 CDS GBP346_A0922 NC_012695.1 878180 878902 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein complement(878180..878902) Burkholderia pseudomallei MSHR346 7889785 YP_002895647.1 CDS GBP346_A0923 NC_012695.1 879050 879415 D identified by match to protein family HMM PF04234; copper resistance protein CopC 879050..879415 Burkholderia pseudomallei MSHR346 7889782 YP_002895648.1 CDS GBP346_A0924 NC_012695.1 879438 880487 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(879438..880487) Burkholderia pseudomallei MSHR346 7886892 YP_002895649.1 CDS GBP346_A0925 NC_012695.1 880602 881498 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(880602..881498) Burkholderia pseudomallei MSHR346 7887246 YP_002895650.1 CDS GBP346_A0926 NC_012695.1 881620 882516 D identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 881620..882516 Burkholderia pseudomallei MSHR346 7888190 YP_002895651.1 CDS GBP346_A0927 NC_012695.1 882743 883432 R identified by match to protein family HMM PF03473; mosc domain protein complement(882743..883432) Burkholderia pseudomallei MSHR346 7890258 YP_002895652.1 CDS GBP346_A0928 NC_012695.1 883447 884343 R identified by match to protein family HMM PF00701; putative dihydrodipicolinate synthase complement(883447..884343) Burkholderia pseudomallei MSHR346 7886701 YP_002895653.1 CDS GBP346_A0929 NC_012695.1 884425 885330 R identified by match to protein family HMM PF00596; class II aldolase/adducin domain protein complement(884425..885330) Burkholderia pseudomallei MSHR346 7888599 YP_002895654.1 CDS GBP346_A0930 NC_012695.1 885339 885902 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 885339..885902 Burkholderia pseudomallei MSHR346 7886828 YP_002895655.1 CDS GBP346_A0931 NC_012695.1 886001 886201 D hypothetical protein 886001..886201 Burkholderia pseudomallei MSHR346 7889093 YP_002895656.1 CDS GBP346_A0932 NC_012695.1 887058 888128 D identified by match to protein family HMM PF08220; match to protein family HMM PF08279; helix-turn-helix type 11 domain protein 887058..888128 Burkholderia pseudomallei MSHR346 7887051 YP_002895657.1 CDS GBP346_A0933 NC_012695.1 888564 888680 D hypothetical protein 888564..888680 Burkholderia pseudomallei MSHR346 7888355 YP_002895658.1 CDS GBP346_A0934 NC_012695.1 888901 893010 D hypothetical protein 888901..893010 Burkholderia pseudomallei MSHR346 7890814 YP_002895659.1 CDS GBP346_A0935 NC_012695.1 893036 895237 D hypothetical protein 893036..895237 Burkholderia pseudomallei MSHR346 7888406 YP_002895660.1 CDS GBP346_A0936 NC_012695.1 895273 896229 R identified by match to protein family HMM PF00665; integrase core domain protein complement(895273..896229) Burkholderia pseudomallei MSHR346 7888159 YP_002895661.1 CDS GBP346_A0937 NC_012695.1 896551 897882 D identified by match to protein family HMM PF00589; phage integrase family protein 896551..897882 Burkholderia pseudomallei MSHR346 7890011 YP_002895662.1 CDS GBP346_A0938 NC_012695.1 897906 898256 D identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683; probable addiction module killer protein 897906..898256 Burkholderia pseudomallei MSHR346 7890057 YP_002895663.1 CDS GBP346_A0939 NC_012695.1 898264 898548 D putative transcriptional regulator 898264..898548 Burkholderia pseudomallei MSHR346 7888937 YP_002895664.1 CDS GBP346_A0940 NC_012695.1 898662 899342 D identified by glimmer; putative; hypothetical protein 898662..899342 Burkholderia pseudomallei MSHR346 7889099 YP_002895665.1 CDS GBP346_A0941 NC_012695.1 900049 901143 D identified by glimmer; putative; hypothetical protein 900049..901143 Burkholderia pseudomallei MSHR346 7889242 YP_002895666.1 CDS GBP346_A0942 NC_012695.1 901323 906524 D hypothetical protein 901323..906524 Burkholderia pseudomallei MSHR346 7887826 YP_002895667.1 CDS GBP346_A0943 NC_012695.1 906804 908363 R hypothetical protein complement(906804..908363) Burkholderia pseudomallei MSHR346 7886756 YP_002895668.1 CDS GBP346_A0944 NC_012695.1 908959 909831 D identified by match to protein family HMM PF06067; protein YafZ 908959..909831 Burkholderia pseudomallei MSHR346 7888384 YP_002895669.1 CDS GBP346_A0945 NC_012695.1 909792 911954 D identified by match to protein family HMM PF02195; ParB domain protein nuclease 909792..911954 Burkholderia pseudomallei MSHR346 7887149 YP_002895670.1 CDS GBP346_A0946 NC_012695.1 912106 912225 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 912106..912225 Burkholderia pseudomallei MSHR346 7889887 YP_002895671.1 CDS GBP346_A0947 NC_012695.1 912467 913282 D hypothetical protein 912467..913282 Burkholderia pseudomallei MSHR346 7888520 YP_002895672.1 CDS GBP346_A0948 NC_012695.1 914090 914404 D identified by match to protein family HMM PF05284; hypothetical protein 914090..914404 Burkholderia pseudomallei MSHR346 7890357 YP_002895673.1 CDS GBP346_A0949 NC_012695.1 914770 915813 R hypothetical protein complement(914770..915813) Burkholderia pseudomallei MSHR346 7889754 YP_002895674.1 CDS GBP346_A0950 NC_012695.1 916051 916344 R identified by match to protein family HMM PF01381; helix-turn-helix domain protein complement(916051..916344) Burkholderia pseudomallei MSHR346 7888829 YP_002895675.1 CDS GBP346_A0951 NC_012695.1 916567 916914 D hypothetical protein 916567..916914 Burkholderia pseudomallei MSHR346 7887028 YP_002895676.1 CDS GBP346_A0952 NC_012695.1 916983 917126 R identified by glimmer; putative; hypothetical protein complement(916983..917126) Burkholderia pseudomallei MSHR346 7890523 YP_002895677.1 CDS GBP346_A0953 NC_012695.1 917256 918005 D hypothetical protein 917256..918005 Burkholderia pseudomallei MSHR346 7890725 YP_002895678.1 CDS GBP346_A0954 NC_012695.1 918089 918379 D hypothetical protein 918089..918379 Burkholderia pseudomallei MSHR346 7890368 YP_002895679.1 CDS GBP346_A0955 NC_012695.1 918406 919263 D replication protein A 918406..919263 Burkholderia pseudomallei MSHR346 7890093 YP_002895680.1 CDS GBP346_A0956 NC_012695.1 919517 920155 D identified by match to protein family HMM PF01656; cobyrinic acid ac-diamide synthase 919517..920155 Burkholderia pseudomallei MSHR346 7889033 YP_002895681.1 CDS GBP346_A0957 NC_012695.1 920143 920415 D hypothetical protein 920143..920415 Burkholderia pseudomallei MSHR346 7888021 YP_002895682.1 CDS GBP346_A0958 NC_012695.1 920412 920945 D hypothetical protein 920412..920945 Burkholderia pseudomallei MSHR346 7888588 YP_002895683.1 CDS GBP346_A0959 NC_012695.1 920942 921529 D traf peptidase, serine peptidase, merops family s26c 920942..921529 Burkholderia pseudomallei MSHR346 7886758 YP_002895684.1 CDS GBP346_A0960 NC_012695.1 921965 923926 D hypothetical protein 921965..923926 Burkholderia pseudomallei MSHR346 7886961 YP_002895685.1 CDS GBP346_A0961 NC_012695.1 925072 926466 D identified by match to protein family HMM PF00355; match to protein family HMM PF00848; Rieske (2Fe-2S) domain protein 925072..926466 Burkholderia pseudomallei MSHR346 7888174 YP_002895686.1 CDS GBP346_A0962 NC_012695.1 926463 926939 D identified by match to protein family HMM PF00866; anthranilate dioxygenase small subunit 926463..926939 Burkholderia pseudomallei MSHR346 7888632 YP_002895687.1 CDS GBP346_A0963 NC_012695.1 928663 929502 D identified by match to protein family HMM PF00775; match to protein family HMM PF04444; hydroxyquinol 1,2-dioxygenase (1,2-HQD) 928663..929502 Burkholderia pseudomallei MSHR346 7889991 YP_002895688.1 CDS GBP346_A0964 NC_012695.1 929707 930783 D identified by match to protein family HMM PF00465; maleylacetate reductase 929707..930783 Burkholderia pseudomallei MSHR346 7888582 YP_002895689.1 CDS GBP346_A0965 NC_012695.1 931006 931860 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07690; 4-hydroxybenzoate transporter 931006..931860 Burkholderia pseudomallei MSHR346 7887348 YP_002895690.1 CDS GBP346_A0966 NC_012695.1 932160 932309 D identified by glimmer; putative; hypothetical protein 932160..932309 Burkholderia pseudomallei MSHR346 7887315 YP_002895691.1 CDS GBP346_A0967 NC_012695.1 932425 933393 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 932425..933393 Burkholderia pseudomallei MSHR346 7890863 YP_002895692.1 CDS GBP346_A0968 NC_012695.1 933772 935775 D type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 933772..935775 Burkholderia pseudomallei MSHR346 7889439 YP_002895693.1 CDS GBP346_A0969 NC_012695.1 935772 936236 D CopG domain protein DNA-binding domain protein 935772..936236 Burkholderia pseudomallei MSHR346 7886883 YP_002895694.1 CDS trbB NC_012695.1 936233 937261 D identified by match to protein family HMM PF00437; match to protein family HMM TIGR02782; P-type conjugative transfer ATPase TrbB 936233..937261 Burkholderia pseudomallei MSHR346 7888607 YP_002895695.1 CDS GBP346_A0971 NC_012695.1 937258 937632 D identified by match to protein family HMM PF04956; conjugal transfer protein TrbC 937258..937632 Burkholderia pseudomallei MSHR346 7887366 YP_002895696.1 CDS GBP346_A0972 NC_012695.1 937629 937898 D conjugal transfer protein 937629..937898 Burkholderia pseudomallei MSHR346 7887785 YP_002895697.1 CDS GBP346_A0973 NC_012695.1 937909 940371 D type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 937909..940371 Burkholderia pseudomallei MSHR346 7888397 YP_002895698.1 CDS trbJ NC_012695.1 940368 941132 D identified by match to protein family HMM TIGR02780; conjugal transfer protein TrbJ 940368..941132 Burkholderia pseudomallei MSHR346 7889577 YP_002895699.1 CDS trbL NC_012695.1 941181 942329 D identified by match to protein family HMM PF04610; match to protein family HMM TIGR02783; P-type conjugative transfer protein TrbL 941181..942329 Burkholderia pseudomallei MSHR346 7887503 YP_002895700.1 CDS GBP346_A0976 NC_012695.1 942342 943046 D identified by match to protein family HMM PF04585; conjugal transfer protein TrbF 942342..943046 Burkholderia pseudomallei MSHR346 7887151 YP_002895701.1 CDS trbG NC_012695.1 943043 944047 D identified by match to protein family HMM PF03524; match to protein family HMM TIGR02775; P-type conjugative transfer protein TrbG 943043..944047 Burkholderia pseudomallei MSHR346 7888811 YP_002895702.1 CDS GBP346_A0978 NC_012695.1 944050 945330 D identified by match to protein family HMM PF03743; conjugation TrbI family protein 944050..945330 Burkholderia pseudomallei MSHR346 7887690 YP_002895703.1 CDS GBP346_A0979 NC_012695.1 945327 945569 D hypothetical protein 945327..945569 Burkholderia pseudomallei MSHR346 7889143 YP_002895704.1 CDS GBP346_A0980 NC_012695.1 946517 946909 R ISPsy5, transposase complement(946517..946909) Burkholderia pseudomallei MSHR346 7890425 YP_002895705.1 CDS GBP346_A0981 NC_012695.1 947965 948105 D identified by glimmer; putative; hypothetical protein 947965..948105 Burkholderia pseudomallei MSHR346 7887184 YP_002895706.1 CDS GBP346_A0982 NC_012695.1 948470 949219 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; 3-oxoadipate CoA-transferase, A subunit 948470..949219 Burkholderia pseudomallei MSHR346 7888019 YP_002895707.1 CDS GBP346_A0983 NC_012695.1 949216 949884 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) 949216..949884 Burkholderia pseudomallei MSHR346 7888117 YP_002895708.1 CDS GBP346_A0984 NC_012695.1 949881 950855 D identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase, NPD 949881..950855 Burkholderia pseudomallei MSHR346 7888101 YP_002895709.1 CDS GBP346_A0985 NC_012695.1 951834 953105 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; cis,cis-muconate transport protein MucK 951834..953105 Burkholderia pseudomallei MSHR346 7890636 YP_002895710.1 CDS GBP346_A0986 NC_012695.1 953158 953337 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; extracellular ligand-binding receptor 953158..953337 Burkholderia pseudomallei MSHR346 7888365 YP_002895711.1 CDS GBP346_A0987 NC_012695.1 953367 953501 D identified by glimmer; putative; hypothetical protein 953367..953501 Burkholderia pseudomallei MSHR346 7887929 YP_002895712.1 CDS GBP346_A0988 NC_012695.1 953856 955874 D AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 953856..955874 Burkholderia pseudomallei MSHR346 7889137 YP_002895713.1 CDS GBP346_A0989 NC_012695.1 956004 957452 D identified by glimmer; putative; hypothetical protein 956004..957452 Burkholderia pseudomallei MSHR346 7889567 YP_002895714.1 CDS GBP346_A0990 NC_012695.1 957503 958486 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(957503..958486) Burkholderia pseudomallei MSHR346 7889727 YP_002895715.1 CDS GBP346_A0991 NC_012695.1 958641 959474 R identified by match to protein family HMM PF00665; integrase core domain protein complement(958641..959474) Burkholderia pseudomallei MSHR346 7888071 YP_002895716.1 CDS GBP346_A0992 NC_012695.1 959498 959761 R identified by match to protein family HMM PF01527; transposase family protein complement(959498..959761) Burkholderia pseudomallei MSHR346 7888972 YP_002895717.1 CDS GBP346_A0993 NC_012695.1 960662 962047 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; 4-hydroxybenzoate transporter 960662..962047 Burkholderia pseudomallei MSHR346 7888363 YP_002895718.1 CDS GBP346_A0994 NC_012695.1 963092 963445 D porin, Gram-negative type 963092..963445 Burkholderia pseudomallei MSHR346 7887033 YP_002895719.1 CDS GBP346_A0995 NC_012695.1 963674 963838 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; type I restriction-modification system, R subunit 963674..963838 Burkholderia pseudomallei MSHR346 7890480 YP_002895720.1 CDS GBP346_A0996 NC_012695.1 963891 964331 D identified by match to protein family HMM PF00005; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 963891..964331 Burkholderia pseudomallei MSHR346 7890597 YP_002895721.1 CDS GBP346_A0997 NC_012695.1 964370 965221 D N-acetylanthranilate amidase 964370..965221 Burkholderia pseudomallei MSHR346 7890017 YP_002895722.1 CDS GBP346_A0998 NC_012695.1 966208 966384 R hypothetical protein complement(966208..966384) Burkholderia pseudomallei MSHR346 7887242 YP_002895723.1 CDS GBP346_A0999 NC_012695.1 966543 967484 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator CysB-like protein complement(966543..967484) Burkholderia pseudomallei MSHR346 7886955 YP_002895724.1 CDS GBP346_A1000 NC_012695.1 967704 969383 D identified by match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite reductase, ferredoxin subunit 967704..969383 Burkholderia pseudomallei MSHR346 7888001 YP_002895725.1 CDS GBP346_A1001 NC_012695.1 969408 969950 D identified by match to protein family HMM PF06073; hypothetical protein 969408..969950 Burkholderia pseudomallei MSHR346 7886716 YP_002895726.1 CDS GBP346_A1002 NC_012695.1 969947 970696 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 969947..970696 Burkholderia pseudomallei MSHR346 7887595 YP_002895727.1 CDS GBP346_A1003 NC_012695.1 970777 971742 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 970777..971742 Burkholderia pseudomallei MSHR346 7889037 YP_002895728.1 CDS GBP346_A1004 NC_012695.1 971765 973081 D identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR02034; sulfate adenylyltransferase subunit 1 971765..973081 Burkholderia pseudomallei MSHR346 7890853 YP_002895729.1 CDS cobA_1 NC_012695.1 973135 973914 D catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 973135..973914 Burkholderia pseudomallei MSHR346 7889438 YP_002895730.1 CDS cbiX NC_012695.1 974125 974511 R identified by match to protein family HMM PF01903; sirohydrochlorin cobaltochelatase complement(974125..974511) Burkholderia pseudomallei MSHR346 7889359 YP_002895731.1 CDS GBP346_A1007 NC_012695.1 974543 975694 R identified by match to protein family HMM PF03739; permease YjgP/YjgQ family protein complement(974543..975694) Burkholderia pseudomallei MSHR346 7888886 YP_002895732.1 CDS GBP346_A1008 NC_012695.1 975698 976795 R identified by match to protein family HMM PF03739; permease YjgP/YjgQ family protein complement(975698..976795) Burkholderia pseudomallei MSHR346 7887107 YP_002895733.1 CDS GBP346_A1009 NC_012695.1 976916 978427 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 976916..978427 Burkholderia pseudomallei MSHR346 7889339 YP_002895734.1 CDS GBP346_A1010 NC_012695.1 978471 978887 D binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 978471..978887 Burkholderia pseudomallei MSHR346 7887597 YP_002895735.1 CDS GBP346_A1011 NC_012695.1 978909 979619 D hypothetical protein 978909..979619 Burkholderia pseudomallei MSHR346 7887104 YP_002895736.1 CDS GBP346_A1012 NC_012695.1 979777 980100 R identified by match to protein family HMM PF00034; cytochrome c family protein complement(979777..980100) Burkholderia pseudomallei MSHR346 7890076 YP_002895737.1 CDS GBP346_A1013 NC_012695.1 980144 980266 R ISBma2, transposase complement(980144..980266) Burkholderia pseudomallei MSHR346 7888000 YP_002895738.1 CDS ilvD NC_012695.1 980314 981987 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(980314..981987) Burkholderia pseudomallei MSHR346 7887890 YP_002895739.1 CDS GBP346_A1015 NC_012695.1 982123 983160 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; HTH-type transcriptional regulator IlvR 982123..983160 Burkholderia pseudomallei MSHR346 7888086 YP_002895740.1 CDS GBP346_A1016 NC_012695.1 983157 983270 D identified by glimmer; putative; hypothetical protein 983157..983270 Burkholderia pseudomallei MSHR346 7886736 YP_002895741.1 CDS lgt NC_012695.1 983267 984157 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 983267..984157 Burkholderia pseudomallei MSHR346 7890624 YP_002895742.1 CDS GBP346_A1018 NC_012695.1 984496 985233 R identified by match to protein family HMM PF04402; protein 3SC2 complement(984496..985233) Burkholderia pseudomallei MSHR346 7888311 YP_002895743.1 CDS GBP346_A1019 NC_012695.1 985274 985417 D identified by glimmer; putative; hypothetical protein 985274..985417 Burkholderia pseudomallei MSHR346 7887958 YP_002895744.1 CDS GBP346_A1020 NC_012695.1 985432 985893 R identified by match to protein family HMM PF01878; hypothetical protein complement(985432..985893) Burkholderia pseudomallei MSHR346 7887015 YP_002895745.1 CDS GBP346_A1022 NC_012695.1 986233 986547 R identified by match to protein family HMM PF05164; cell division protein ZapA complement(986233..986547) Burkholderia pseudomallei MSHR346 7887081 YP_002895746.1 CDS GBP346_A1023 NC_012695.1 986544 986894 R hypothetical protein complement(986544..986894) Burkholderia pseudomallei MSHR346 7887723 YP_002895747.1 CDS GBP346_A1026 NC_012695.1 987433 989490 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for transport of vitamin B 987433..989490 Burkholderia pseudomallei MSHR346 7887952 YP_002895748.1 CDS GBP346_A1025 NC_012695.1 989460 989582 R hypothetical protein complement(989460..989582) Burkholderia pseudomallei MSHR346 7889671 YP_002895749.1 CDS GBP346_A1027 NC_012695.1 989581 990582 D identified by match to protein family HMM PF01032; cobalamin ABC transporter, permease protein 989581..990582 Burkholderia pseudomallei MSHR346 7890551 YP_002895750.1 CDS GBP346_A1028 NC_012695.1 990579 991409 D identified by match to protein family HMM PF00005; cobalamin ABC transporter, ATP-binding protein 990579..991409 Burkholderia pseudomallei MSHR346 7887357 YP_002895751.1 CDS cobT NC_012695.1 991453 992511 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 991453..992511 Burkholderia pseudomallei MSHR346 7887260 YP_002895752.1 CDS cobS NC_012695.1 992518 993276 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 992518..993276 Burkholderia pseudomallei MSHR346 7890953 YP_002895753.1 CDS cobC NC_012695.1 993261 993860 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; alpha-ribazole phosphatase 993261..993860 Burkholderia pseudomallei MSHR346 7889952 YP_002895754.1 CDS GBP346_A1033 NC_012695.1 993907 994029 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 993907..994029 Burkholderia pseudomallei MSHR346 7890477 YP_002895755.1 CDS GBP346_A1032 NC_012695.1 994005 994841 R hypothetical protein complement(994005..994841) Burkholderia pseudomallei MSHR346 7890674 YP_002895756.1 CDS btuF NC_012695.1 995007 995939 R identified by match to protein family HMM PF01497; cobalamin ABC transporter, periplasmic cobalamin-binding protein complement(995007..995939) Burkholderia pseudomallei MSHR346 7889084 YP_002895757.1 CDS GBP346_A1035 NC_012695.1 995945 996997 R cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; putative threonine-phosphate decarboxylase complement(995945..996997) Burkholderia pseudomallei MSHR346 7888204 YP_002895758.1 CDS cobD NC_012695.1 996990 997934 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(996990..997934) Burkholderia pseudomallei MSHR346 7889257 YP_002895759.1 CDS GBP346_A1037 NC_012695.1 997928 998554 R identified by match to protein family HMM PF02283; bifunctional adenosylcobalamin biosynthesis protein CobP complement(997928..998554) Burkholderia pseudomallei MSHR346 7887173 YP_002895760.1 CDS cobQ NC_012695.1 998513 1000144 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 998513..1000144 Burkholderia pseudomallei MSHR346 7890903 YP_002895761.1 CDS GBP346_A1039 NC_012695.1 1000425 1000841 D identified by match to protein family HMM PF07681; DoxX family protein 1000425..1000841 Burkholderia pseudomallei MSHR346 7886693 YP_002895762.1 CDS GBP346_A1040 NC_012695.1 1001200 1001823 D identified by match to protein family HMM PF01656; ParA family protein 1001200..1001823 Burkholderia pseudomallei MSHR346 7889665 YP_002895763.1 CDS panD NC_012695.1 1001943 1002329 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1001943..1002329) Burkholderia pseudomallei MSHR346 7887813 YP_002895764.1 CDS panC NC_012695.1 1002382 1003221 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1002382..1003221) Burkholderia pseudomallei MSHR346 7888959 YP_002895765.1 CDS GBP346_A1043 NC_012695.1 1003623 1003736 R hypothetical protein complement(1003623..1003736) Burkholderia pseudomallei MSHR346 7889386 YP_002895766.1 CDS GBP346_A1044 NC_012695.1 1003929 1004804 R identified by match to protein family HMM PF02616; ScpA/B protein complement(1003929..1004804) Burkholderia pseudomallei MSHR346 7886868 YP_002895767.1 CDS GBP346_A1045 NC_012695.1 1004809 1004997 R hypothetical protein complement(1004809..1004997) Burkholderia pseudomallei MSHR346 7886950 YP_002895768.1 CDS GBP346_A1046 NC_012695.1 1005204 1007021 D identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein, OMP85 family 1005204..1007021 Burkholderia pseudomallei MSHR346 7888741 YP_002895769.1 CDS GBP346_A1047 NC_012695.1 1007035 1011153 D identified by match to protein family HMM PF04357; gramicidin S biosynthesis GrsT protein 1007035..1011153 Burkholderia pseudomallei MSHR346 7890617 YP_002895770.1 CDS GBP346_A1048 NC_012695.1 1011449 1012213 D hypothetical protein 1011449..1012213 Burkholderia pseudomallei MSHR346 7888769 YP_002895771.1 CDS GBP346_A1050 NC_012695.1 1012210 1013223 D identified by match to protein family HMM PF00891; O-methyltransferase family protein 1012210..1013223 Burkholderia pseudomallei MSHR346 7887709 YP_002895772.1 CDS GBP346_A1049 NC_012695.1 1013195 1013332 R identified by glimmer; putative; hypothetical protein complement(1013195..1013332) Burkholderia pseudomallei MSHR346 7888235 YP_002895773.1 CDS metG NC_012695.1 1013579 1015756 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1013579..1015756) Burkholderia pseudomallei MSHR346 7889745 YP_002895774.1 CDS GBP346_A1052 NC_012695.1 1016238 1016885 R identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein complement(1016238..1016885) Burkholderia pseudomallei MSHR346 7888089 YP_002895775.1 CDS GBP346_A1053 NC_012695.1 1017264 1018352 D identified by match to protein family HMM PF01656; match to protein family HMM PF01883; ParA family protein 1017264..1018352 Burkholderia pseudomallei MSHR346 7887202 YP_002895776.1 CDS sodC NC_012695.1 1018485 1019024 D identified by match to protein family HMM PF00080; copper/zinc superoxide dismutase 1018485..1019024 Burkholderia pseudomallei MSHR346 7890825 YP_002895777.1 CDS dcd NC_012695.1 1019128 1019697 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1019128..1019697 Burkholderia pseudomallei MSHR346 7890538 YP_002895778.1 CDS GBP346_A1056 NC_012695.1 1019800 1022079 D identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711; biodegradative arginine decarboxylase (ADC) 1019800..1022079 Burkholderia pseudomallei MSHR346 7889357 YP_002895779.1 CDS GBP346_A1057 NC_012695.1 1022082 1022801 D hypothetical protein 1022082..1022801 Burkholderia pseudomallei MSHR346 7889453 YP_002895780.1 CDS GBP346_A1058 NC_012695.1 1022935 1023609 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase complement(1022935..1023609) Burkholderia pseudomallei MSHR346 7887740 YP_002895781.1 CDS argH_1 NC_012695.1 1023642 1025051 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(1023642..1025051) Burkholderia pseudomallei MSHR346 7889947 YP_002895782.1 CDS GBP346_A1060 NC_012695.1 1025220 1027520 R identified by match to protein family HMM PF00577; fimbrial usher protein complement(1025220..1027520) Burkholderia pseudomallei MSHR346 7889639 YP_002895783.1 CDS GBP346_A1061 NC_012695.1 1028302 1029012 R P pilus assembly protein, chaperone PapD complement(1028302..1029012) Burkholderia pseudomallei MSHR346 7886695 YP_002895784.1 CDS GBP346_A1062 NC_012695.1 1029020 1029538 R identified by match to protein family HMM PF05229; spore coat protein complement(1029020..1029538) Burkholderia pseudomallei MSHR346 7887253 YP_002895785.1 CDS GBP346_A1064 NC_012695.1 1029885 1030922 D identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1029885..1030922 Burkholderia pseudomallei MSHR346 7888194 YP_002895786.1 CDS GBP346_A1063 NC_012695.1 1030886 1031098 R identified by glimmer; putative; hypothetical protein complement(1030886..1031098) Burkholderia pseudomallei MSHR346 7888949 YP_002895787.1 CDS GBP346_A1065 NC_012695.1 1031095 1031910 R hypothetical protein complement(1031095..1031910) Burkholderia pseudomallei MSHR346 7890295 YP_002895788.1 CDS GBP346_A1066 NC_012695.1 1032093 1032848 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; methlytransferase, UbiE/COQ5 family 1032093..1032848 Burkholderia pseudomallei MSHR346 7886942 YP_002895789.1 CDS ppc NC_012695.1 1033301 1036375 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(1033301..1036375) Burkholderia pseudomallei MSHR346 7887118 YP_002895790.1 CDS GBP346_A1068 NC_012695.1 1036398 1036577 D hydroxymethylbilane synthase 1036398..1036577 Burkholderia pseudomallei MSHR346 7887822 YP_002895791.1 CDS hemC NC_012695.1 1036612 1037601 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1036612..1037601 Burkholderia pseudomallei MSHR346 7889530 YP_002895792.1 CDS GBP346_A1070 NC_012695.1 1037601 1039580 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 1037601..1039580 Burkholderia pseudomallei MSHR346 7889591 YP_002895793.1 CDS GBP346_A1072 NC_012695.1 1039585 1040775 D identified by match to protein family HMM PF07219; match to protein family HMM PF07719; match to protein family HMM PF07721; HemY protein, N-terminus family 1039585..1040775 Burkholderia pseudomallei MSHR346 7890881 YP_002895794.1 CDS GBP346_A1071 NC_012695.1 1040762 1040911 R hypothetical protein complement(1040762..1040911) Burkholderia pseudomallei MSHR346 7887341 YP_002895795.1 CDS GBP346_A1073 NC_012695.1 1040944 1042251 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter complement(1040944..1042251) Burkholderia pseudomallei MSHR346 7889244 YP_002895796.1 CDS fabG NC_012695.1 1042290 1043048 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(1042290..1043048) Burkholderia pseudomallei MSHR346 7890509 YP_002895797.1 CDS GBP346_A1075 NC_012695.1 1043135 1044574 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2b4, (aldh2a) complement(1043135..1044574) Burkholderia pseudomallei MSHR346 7889054 YP_002895798.1 CDS ppa NC_012695.1 1044735 1045262 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1044735..1045262 Burkholderia pseudomallei MSHR346 7890234 YP_002895799.1 CDS GBP346_A1077 NC_012695.1 1045321 1046220 R identified by match to protein family HMM PF01541; endo/excinuclease domain protein complement(1045321..1046220) Burkholderia pseudomallei MSHR346 7889865 YP_002895800.1 CDS GBP346_A1078 NC_012695.1 1046219 1046332 D hypothetical protein 1046219..1046332 Burkholderia pseudomallei MSHR346 7890699 YP_002895801.1 CDS GBP346_A1079 NC_012695.1 1046403 1047068 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; beta-D-glucosidase 1046403..1047068 Burkholderia pseudomallei MSHR346 7889578 YP_002895802.1 CDS GBP346_A1080 NC_012695.1 1047256 1048581 R identified by match to protein family HMM PF04339; hypothetical protein complement(1047256..1048581) Burkholderia pseudomallei MSHR346 7889842 YP_002895803.1 CDS nadE_1 NC_012695.1 1048555 1050255 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1048555..1050255 Burkholderia pseudomallei MSHR346 7887778 YP_002895804.1 CDS GBP346_A1082 NC_012695.1 1050316 1050654 D identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 1050316..1050654 Burkholderia pseudomallei MSHR346 7889504 YP_002895805.1 CDS GBP346_A1083 NC_012695.1 1051113 1052204 R putative outer membrane porin complement(1051113..1052204) Burkholderia pseudomallei MSHR346 7887628 YP_002895806.1 CDS GBP346_A1085 NC_012695.1 1052924 1053103 D identified by glimmer; putative; hypothetical protein 1052924..1053103 Burkholderia pseudomallei MSHR346 7887941 YP_002895807.1 CDS GBP346_A1084 NC_012695.1 1053096 1053863 R identified by match to protein family HMM PF00005; arginine/ornithine transport ATP-binding protein AotP complement(1053096..1053863) Burkholderia pseudomallei MSHR346 7888676 YP_002895808.1 CDS GBP346_A1086 NC_012695.1 1053898 1054611 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine ABC transporter, permease protein complement(1053898..1054611) Burkholderia pseudomallei MSHR346 7887308 YP_002895809.1 CDS GBP346_A1087 NC_012695.1 1054608 1055297 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine transport system permease protein HisQ complement(1054608..1055297) Burkholderia pseudomallei MSHR346 7890092 YP_002895810.1 CDS GBP346_A1088 NC_012695.1 1055508 1056482 R identified by match to protein family HMM PF00497; match to protein family HMM TIGR01096; histidine ABC transporter, periplasmic histidine-binding protein complement(1055508..1056482) Burkholderia pseudomallei MSHR346 7890557 YP_002895811.1 CDS GBP346_A1089 NC_012695.1 1056443 1056604 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; amino acid ABC transporter, periplasmic amino acid-binding protein complement(1056443..1056604) Burkholderia pseudomallei MSHR346 7888185 YP_002895812.1 CDS GBP346_A1090 NC_012695.1 1056665 1057375 D identified by match to protein family HMM PF02678; cupin domain protein 1056665..1057375 Burkholderia pseudomallei MSHR346 7889246 YP_002895813.1 CDS GBP346_A1091 NC_012695.1 1057722 1058267 R hypothetical protein complement(1057722..1058267) Burkholderia pseudomallei MSHR346 7890253 YP_002895814.1 CDS GBP346_A1092 NC_012695.1 1058283 1058441 D identified by glimmer; putative; hypothetical protein 1058283..1058441 Burkholderia pseudomallei MSHR346 7890735 YP_002895815.1 CDS ompR NC_012695.1 1058509 1059234 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator OmpR 1058509..1059234 Burkholderia pseudomallei MSHR346 7890034 YP_002895816.1 CDS GBP346_A1094 NC_012695.1 1059218 1060531 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; signal transduction histidine kinase 1059218..1060531 Burkholderia pseudomallei MSHR346 7890108 YP_002895817.1 CDS GBP346_A1095 NC_012695.1 1060568 1060834 R hypothetical protein complement(1060568..1060834) Burkholderia pseudomallei MSHR346 7890479 YP_002895818.1 CDS GBP346_A1096 NC_012695.1 1060961 1061098 R hypothetical protein complement(1060961..1061098) Burkholderia pseudomallei MSHR346 7890621 YP_002895819.1 CDS GBP346_A1097 NC_012695.1 1061331 1063088 D identified by match to protein family HMM PF00528; ABC transporter, permease protein 1061331..1063088 Burkholderia pseudomallei MSHR346 7888739 YP_002895820.1 CDS GBP346_A1098 NC_012695.1 1063142 1064482 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1063142..1064482 Burkholderia pseudomallei MSHR346 7889949 YP_002895821.1 CDS GBP346_A1099 NC_012695.1 1064634 1064798 R hypothetical protein complement(1064634..1064798) Burkholderia pseudomallei MSHR346 7888876 YP_002895822.1 CDS GBP346_A1100 NC_012695.1 1064855 1065361 R putative lipoprotein complement(1064855..1065361) Burkholderia pseudomallei MSHR346 7887975 YP_002895823.1 CDS GBP346_A1101 NC_012695.1 1065358 1065909 R putative lipoprotein complement(1065358..1065909) Burkholderia pseudomallei MSHR346 7887154 YP_002895824.1 CDS GBP346_A1102 NC_012695.1 1066273 1066422 R hypothetical protein complement(1066273..1066422) Burkholderia pseudomallei MSHR346 7888125 YP_002895825.1 CDS otsA_1 NC_012695.1 1066528 1067946 D identified by match to protein family HMM PF00982; match to protein family HMM TIGR02400; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 1066528..1067946 Burkholderia pseudomallei MSHR346 7890054 YP_002895826.1 CDS GBP346_A1104 NC_012695.1 1067939 1068541 D hypothetical protein 1067939..1068541 Burkholderia pseudomallei MSHR346 7887921 YP_002895827.1 CDS GBP346_A1105 NC_012695.1 1068714 1069325 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1068714..1069325) Burkholderia pseudomallei MSHR346 7889003 YP_002895828.1 CDS GBP346_A1106 NC_012695.1 1070095 1071468 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(1070095..1071468) Burkholderia pseudomallei MSHR346 7888684 YP_002895829.1 CDS GBP346_A1107 NC_012695.1 1071592 1072104 R identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein complement(1071592..1072104) Burkholderia pseudomallei MSHR346 7887463 YP_002895830.1 CDS GBP346_A1108 NC_012695.1 1072678 1073058 R hypothetical protein complement(1072678..1073058) Burkholderia pseudomallei MSHR346 7888295 YP_002895831.1 CDS GBP346_A1109 NC_012695.1 1073216 1073470 D identified by glimmer; putative; hypothetical protein 1073216..1073470 Burkholderia pseudomallei MSHR346 7890762 YP_002895832.1 CDS GBP346_A1110 NC_012695.1 1073470 1073601 D hypothetical protein 1073470..1073601 Burkholderia pseudomallei MSHR346 7888259 YP_002895833.1 CDS GBP346_A1112 NC_012695.1 1073859 1073993 D hypothetical protein 1073859..1073993 Burkholderia pseudomallei MSHR346 7889791 YP_002895834.1 CDS GBP346_A1111 NC_012695.1 1073963 1074106 R hypothetical protein complement(1073963..1074106) Burkholderia pseudomallei MSHR346 7887142 YP_002895835.1 CDS GBP346_A1113 NC_012695.1 1074075 1074455 R putative lipoprotein complement(1074075..1074455) Burkholderia pseudomallei MSHR346 7888121 YP_002895836.1 CDS GBP346_A1114 NC_012695.1 1074628 1075167 D serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1074628..1075167 Burkholderia pseudomallei MSHR346 7889939 YP_002895837.1 CDS GBP346_A1115 NC_012695.1 1075265 1076401 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase family protein complement(1075265..1076401) Burkholderia pseudomallei MSHR346 7888033 YP_002895838.1 CDS GBP346_A1116 NC_012695.1 1076674 1076898 R hypothetical protein complement(1076674..1076898) Burkholderia pseudomallei MSHR346 7889792 YP_002895839.1 CDS GBP346_A1117 NC_012695.1 1076915 1077064 R hypothetical protein complement(1076915..1077064) Burkholderia pseudomallei MSHR346 7888242 YP_002895840.1 CDS GBP346_A1118 NC_012695.1 1077354 1077830 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF08816; inhibitor of vertebrate lysozyme (Ivy) superfamily 1077354..1077830 Burkholderia pseudomallei MSHR346 7890672 YP_002895841.1 CDS GBP346_A1119 NC_012695.1 1077843 1077974 D identified by glimmer; putative; hypothetical protein 1077843..1077974 Burkholderia pseudomallei MSHR346 7886900 YP_002895842.1 CDS GBP346_A1120 NC_012695.1 1079384 1079575 R hypothetical protein complement(1079384..1079575) Burkholderia pseudomallei MSHR346 7890002 YP_002895843.1 CDS GBP346_A1121 NC_012695.1 1079444 1088824 D identified by match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901; cell surface protein 1079444..1088824 Burkholderia pseudomallei MSHR346 7890427 YP_002895844.1 CDS GBP346_A1122 NC_012695.1 1088830 1089111 D identified by glimmer; putative; hypothetical protein 1088830..1089111 Burkholderia pseudomallei MSHR346 7890116 YP_002895845.1 CDS GBP346_A1123 NC_012695.1 1089213 1089392 D identified by glimmer; putative; hypothetical protein 1089213..1089392 Burkholderia pseudomallei MSHR346 7890213 YP_002895846.1 CDS GBP346_A1124 NC_012695.1 1089705 1091417 D identified by match to protein family HMM PF03865; match to protein family HMM PF08479; hemolysin activation/secretion protein 1089705..1091417 Burkholderia pseudomallei MSHR346 7887697 YP_002895847.1 CDS GBP346_A1125 NC_012695.1 1091435 1091659 D identified by glimmer; putative; hypothetical protein 1091435..1091659 Burkholderia pseudomallei MSHR346 7889261 YP_002895848.1 CDS GBP346_A1126 NC_012695.1 1091820 1092404 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; putative lipoprotein 1091820..1092404 Burkholderia pseudomallei MSHR346 7890774 YP_002895849.1 CDS GBP346_A1127 NC_012695.1 1093356 1093505 D hypothetical protein 1093356..1093505 Burkholderia pseudomallei MSHR346 7889728 YP_002895850.1 CDS GBP346_A1128 NC_012695.1 1093696 1094715 R identified by match to protein family HMM PF02371; transposase for insertion sequence element A complement(1093696..1094715) Burkholderia pseudomallei MSHR346 7887294 YP_002895851.1 CDS GBP346_A1129 NC_012695.1 1094728 1094928 D transposase IS3/family protein 1094728..1094928 Burkholderia pseudomallei MSHR346 7888904 YP_002895852.1 CDS GBP346_A1130 NC_012695.1 1095030 1095221 D integrase catalytic region 1095030..1095221 Burkholderia pseudomallei MSHR346 7890416 YP_002895853.1 CDS GBP346_A1131 NC_012695.1 1095251 1095445 D hypothetical protein 1095251..1095445 Burkholderia pseudomallei MSHR346 7890837 YP_002895854.1 CDS GBP346_A1132 NC_012695.1 1095449 1095709 R hypothetical protein complement(1095449..1095709) Burkholderia pseudomallei MSHR346 7889751 YP_002895855.1 CDS GBP346_A1133 NC_012695.1 1095706 1095840 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1095706..1095840) Burkholderia pseudomallei MSHR346 7890377 YP_002895856.1 CDS GBP346_A1134 NC_012695.1 1096143 1096256 R identified by glimmer; putative; hypothetical protein complement(1096143..1096256) Burkholderia pseudomallei MSHR346 7888441 YP_002895857.1 CDS GBP346_A1135 NC_012695.1 1097103 1097531 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1097103..1097531 Burkholderia pseudomallei MSHR346 7887586 YP_002895858.1 CDS GBP346_A1136 NC_012695.1 1097506 1097829 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1097506..1097829 Burkholderia pseudomallei MSHR346 7888474 YP_002895859.1 CDS GBP346_A1137 NC_012695.1 1098049 1098165 R identified by glimmer; putative; hypothetical protein complement(1098049..1098165) Burkholderia pseudomallei MSHR346 7887459 YP_002895860.1 CDS GBP346_A1138 NC_012695.1 1098779 1099354 R identified by match to protein family HMM PF00239; match to protein family HMM PF02796; resolvase, N domain protein complement(1098779..1099354) Burkholderia pseudomallei MSHR346 7890516 YP_002895861.1 CDS GBP346_A1139 NC_012695.1 1099645 1100646 D hypothetical protein 1099645..1100646 Burkholderia pseudomallei MSHR346 7888786 YP_002895862.1 CDS GBP346_A1140 NC_012695.1 1100930 1101658 D hypothetical protein 1100930..1101658 Burkholderia pseudomallei MSHR346 7890176 YP_002895863.1 CDS GBP346_A1141 NC_012695.1 1101870 1102040 D phage transcriptional regulator, AlpA 1101870..1102040 Burkholderia pseudomallei MSHR346 7889047 YP_002895864.1 CDS GBP346_A1142 NC_012695.1 1102037 1102315 D hypothetical protein 1102037..1102315 Burkholderia pseudomallei MSHR346 7887806 YP_002895865.1 CDS GBP346_A1143 NC_012695.1 1102671 1102847 D hypothetical protein 1102671..1102847 Burkholderia pseudomallei MSHR346 7889476 YP_002895866.1 CDS GBP346_A1144 NC_012695.1 1102840 1103142 D hypothetical protein 1102840..1103142 Burkholderia pseudomallei MSHR346 7887850 YP_002895867.1 CDS GBP346_A1145 NC_012695.1 1103135 1103347 D hypothetical protein 1103135..1103347 Burkholderia pseudomallei MSHR346 7886831 YP_002895868.1 CDS GBP346_A1146 NC_012695.1 1103340 1103687 D hypothetical protein 1103340..1103687 Burkholderia pseudomallei MSHR346 7886781 YP_002895869.1 CDS GBP346_A1147 NC_012695.1 1103697 1104041 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1103697..1104041 Burkholderia pseudomallei MSHR346 7890263 YP_002895870.1 CDS GBP346_A1148 NC_012695.1 1104117 1106978 D identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family 1104117..1106978 Burkholderia pseudomallei MSHR346 7887572 YP_002895871.1 CDS GBP346_A1149 NC_012695.1 1107006 1107119 D identified by glimmer; putative; hypothetical protein 1107006..1107119 Burkholderia pseudomallei MSHR346 7888005 YP_002895872.1 CDS GBP346_A1150 NC_012695.1 1107683 1107811 R identified by glimmer; putative; hypothetical protein complement(1107683..1107811) Burkholderia pseudomallei MSHR346 7889026 YP_002895873.1 CDS GBP346_A1151 NC_012695.1 1108319 1108729 D identified by glimmer; putative; hypothetical protein 1108319..1108729 Burkholderia pseudomallei MSHR346 7890417 YP_002895874.1 CDS GBP346_A1152 NC_012695.1 1108933 1110207 R identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family complement(1108933..1110207) Burkholderia pseudomallei MSHR346 7887576 YP_002895875.1 CDS GBP346_A1154 NC_012695.1 1110730 1111083 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; integrase, catalytic region complement(1110730..1111083) Burkholderia pseudomallei MSHR346 7889206 YP_002895876.1 CDS GBP346_A1155 NC_012695.1 1111170 1111310 D hypothetical protein 1111170..1111310 Burkholderia pseudomallei MSHR346 7889020 YP_002895877.1 CDS GBP346_A1156 NC_012695.1 1111525 1111809 D hypothetical protein 1111525..1111809 Burkholderia pseudomallei MSHR346 7887617 YP_002895878.1 CDS GBP346_A1157 NC_012695.1 1111820 1112122 D hypothetical protein 1111820..1112122 Burkholderia pseudomallei MSHR346 7887014 YP_002895879.1 CDS GBP346_A1158 NC_012695.1 1112122 1112337 D hypothetical protein 1112122..1112337 Burkholderia pseudomallei MSHR346 7888692 YP_002895880.1 CDS GBP346_A1159 NC_012695.1 1112367 1112627 R hypothetical protein complement(1112367..1112627) Burkholderia pseudomallei MSHR346 7890043 YP_002895881.1 CDS infA_1 NC_012695.1 1112851 1113117 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1112851..1113117 Burkholderia pseudomallei MSHR346 7886776 YP_002895882.1 CDS GBP346_A1161 NC_012695.1 1113582 1114508 R identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein complement(1113582..1114508) Burkholderia pseudomallei MSHR346 7887276 YP_002895883.1 CDS GBP346_A1162 NC_012695.1 1114529 1116100 R hypothetical protein complement(1114529..1116100) Burkholderia pseudomallei MSHR346 7890800 YP_002895884.1 CDS GBP346_A1163 NC_012695.1 1116561 1116800 R identified by match to protein family HMM PF00301; hypothetical protein complement(1116561..1116800) Burkholderia pseudomallei MSHR346 7889685 YP_002895885.1 CDS GBP346_A1164 NC_012695.1 1117186 1117593 D Rod shape-determining protein RodA 1117186..1117593 Burkholderia pseudomallei MSHR346 7887365 YP_002895886.1 CDS GBP346_A1165 NC_012695.1 1117725 1119707 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein uup 1117725..1119707 Burkholderia pseudomallei MSHR346 7890126 YP_002895887.1 CDS parE NC_012695.1 1119913 1121895 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1119913..1121895 Burkholderia pseudomallei MSHR346 7890545 YP_002895888.1 CDS parC NC_012695.1 1121954 1124272 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1121954..1124272 Burkholderia pseudomallei MSHR346 7889112 YP_002895889.1 CDS GBP346_A1168 NC_012695.1 1124545 1124820 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1124545..1124820) Burkholderia pseudomallei MSHR346 7886820 YP_002895890.1 CDS GBP346_A1169 NC_012695.1 1124966 1125424 D hypothetical protein 1124966..1125424 Burkholderia pseudomallei MSHR346 7886787 YP_002895891.1 CDS GBP346_A1170 NC_012695.1 1125570 1126454 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(1125570..1126454) Burkholderia pseudomallei MSHR346 7890029 YP_002895892.1 CDS GBP346_A1171 NC_012695.1 1126560 1127015 D identified by match to protein family HMM PF05232; transmembrane pair domain protein 1126560..1127015 Burkholderia pseudomallei MSHR346 7890125 YP_002895893.1 CDS GBP346_A1172 NC_012695.1 1127239 1128201 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(1127239..1128201) Burkholderia pseudomallei MSHR346 7889940 YP_002895894.1 CDS GBP346_A1173 NC_012695.1 1128234 1128431 R putative 200 kDa antigen p200 complement(1128234..1128431) Burkholderia pseudomallei MSHR346 7887516 YP_002895895.1 CDS GBP346_A1174 NC_012695.1 1128417 1129730 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter, major facilitator family 1128417..1129730 Burkholderia pseudomallei MSHR346 7890692 YP_002895896.1 CDS GBP346_A1175 NC_012695.1 1129732 1130994 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1129732..1130994 Burkholderia pseudomallei MSHR346 7886837 YP_002895897.1 CDS GBP346_A1176 NC_012695.1 1131270 1132295 D identified by match to protein family HMM PF00850; histone, deacetylase family 1131270..1132295 Burkholderia pseudomallei MSHR346 7890074 YP_002895898.1 CDS GBP346_A1177 NC_012695.1 1132292 1132444 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; histone H1 protein 1132292..1132444 Burkholderia pseudomallei MSHR346 7888163 YP_002895899.1 CDS GBP346_A1178 NC_012695.1 1132610 1133818 R identified by match to protein family HMM PF02417; chromate transporter, chromate ion transporter complement(1132610..1133818) Burkholderia pseudomallei MSHR346 7887146 YP_002895900.1 CDS GBP346_A1179 NC_012695.1 1133950 1136268 R identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase/phosphodiesterase complement(1133950..1136268) Burkholderia pseudomallei MSHR346 7890561 YP_002895901.1 CDS GBP346_A1180 NC_012695.1 1136530 1137429 R identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; phenazine biosynthesis protein, PhzF family complement(1136530..1137429) Burkholderia pseudomallei MSHR346 7888515 YP_002895902.1 CDS GBP346_A1181 NC_012695.1 1137434 1137892 R identified by match to protein family HMM PF01042; putative endoribonuclease L-PSP complement(1137434..1137892) Burkholderia pseudomallei MSHR346 7888404 YP_002895903.1 CDS GBP346_A1182 NC_012695.1 1137957 1139138 R identified by match to protein family HMM PF00155; aminotransferase, class I and II complement(1137957..1139138) Burkholderia pseudomallei MSHR346 7890420 YP_002895904.1 CDS GBP346_A1183 NC_012695.1 1139199 1140107 R identified by match to protein family HMM PF00892; integral membrane protein, DUF6 complement(1139199..1140107) Burkholderia pseudomallei MSHR346 7888898 YP_002895905.1 CDS GBP346_A1184 NC_012695.1 1140208 1140891 R hypothetical protein complement(1140208..1140891) Burkholderia pseudomallei MSHR346 7888035 YP_002895906.1 CDS GBP346_A1185 NC_012695.1 1141042 1142496 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family 1141042..1142496 Burkholderia pseudomallei MSHR346 7886800 YP_002895907.1 CDS GBP346_A1186 NC_012695.1 1142632 1144530 D molecular chaperone; heat shock protein 90 1142632..1144530 Burkholderia pseudomallei MSHR346 7890257 YP_002895908.1 CDS GBP346_A1187 NC_012695.1 1144530 1145132 D identified by match to protein family HMM PF04345; putative chorismate--pyruvate lyase 1144530..1145132 Burkholderia pseudomallei MSHR346 7889393 YP_002895909.1 CDS GBP346_A1188 NC_012695.1 1145132 1145608 D Mug G:T/U mismatch-specific DNA glycosylase 1145132..1145608 Burkholderia pseudomallei MSHR346 7887784 YP_002895910.1 CDS GBP346_A1189 NC_012695.1 1145605 1145766 D hypothetical protein 1145605..1145766 Burkholderia pseudomallei MSHR346 7890464 YP_002895911.1 CDS GBP346_A1190 NC_012695.1 1145859 1146788 D spermidine synthase 1145859..1146788 Burkholderia pseudomallei MSHR346 7888229 YP_002895912.1 CDS GBP346_A1191 NC_012695.1 1146981 1147220 D hypothetical protein 1146981..1147220 Burkholderia pseudomallei MSHR346 7887834 YP_002895913.1 CDS GBP346_A1192 NC_012695.1 1147217 1148767 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 1147217..1148767 Burkholderia pseudomallei MSHR346 7886853 YP_002895914.1 CDS GBP346_A1193 NC_012695.1 1148895 1149329 R identified by match to protein family HMM PF00903; match to protein family HMM PF06983; VOC metalloenzyme family protein complement(1148895..1149329) Burkholderia pseudomallei MSHR346 7890185 YP_002895915.1 CDS tal NC_012695.1 1149695 1150648 R identified by match to protein family HMM PF00923; match to protein family HMM TIGR00874; transaldolase B complement(1149695..1150648) Burkholderia pseudomallei MSHR346 7890862 YP_002895916.1 CDS GBP346_A1195 NC_012695.1 1150759 1151010 R hypothetical protein complement(1150759..1151010) Burkholderia pseudomallei MSHR346 7887752 YP_002895917.1 CDS GBP346_A1196 NC_012695.1 1151050 1152267 R identified by match to protein family HMM PF00860; match to protein family HMM PF03594; match to protein family HMM TIGR00843; benzoate transporter complement(1151050..1152267) Burkholderia pseudomallei MSHR346 7888860 YP_002895918.1 CDS GBP346_A1197 NC_012695.1 1152351 1153526 R VWA containing CoxE family protein complement(1152351..1153526) Burkholderia pseudomallei MSHR346 7887394 YP_002895919.1 CDS GBP346_A1198 NC_012695.1 1153739 1154581 R identified by match to protein family HMM PF00004; match to protein family HMM PF07728; ATPase, AAA family complement(1153739..1154581) Burkholderia pseudomallei MSHR346 7890498 YP_002895920.1 CDS GBP346_A1199 NC_012695.1 1154815 1155174 D identified by match to protein family HMM PF00034; cytochrome C4 family protein 1154815..1155174 Burkholderia pseudomallei MSHR346 7889889 YP_002895921.1 CDS GBP346_A1200 NC_012695.1 1155215 1155583 D identified by match to protein family HMM PF00034; cytochrome C4 1155215..1155583 Burkholderia pseudomallei MSHR346 7888505 YP_002895922.1 CDS GBP346_A1201 NC_012695.1 1156061 1156612 R identified by match to protein family HMM PF08897; hypothetical protein complement(1156061..1156612) Burkholderia pseudomallei MSHR346 7888367 YP_002895923.1 CDS GBP346_A1202 NC_012695.1 1157026 1158096 D identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein 1157026..1158096 Burkholderia pseudomallei MSHR346 7889938 YP_002895924.1 CDS nth NC_012695.1 1158229 1158873 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(1158229..1158873) Burkholderia pseudomallei MSHR346 7889124 YP_002895925.1 CDS GBP346_A1204 NC_012695.1 1158878 1159750 R Involved in the electron transport chain; ferredoxin complement(1158878..1159750) Burkholderia pseudomallei MSHR346 7890581 YP_002895926.1 CDS GBP346_A1205 NC_012695.1 1160008 1160640 D identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 1160008..1160640 Burkholderia pseudomallei MSHR346 7889579 YP_002895927.1 CDS GBP346_A1206 NC_012695.1 1160783 1162249 R identified by match to protein family HMM PF06850; match to protein family HMM TIGR01849; intracellular PHB depolymerase complement(1160783..1162249) Burkholderia pseudomallei MSHR346 7889838 YP_002895928.1 CDS GBP346_A1207 NC_012695.1 1162187 1162312 D hypothetical protein 1162187..1162312 Burkholderia pseudomallei MSHR346 7887995 YP_002895929.1 CDS GBP346_A1208 NC_012695.1 1162314 1162427 R hypothetical protein complement(1162314..1162427) Burkholderia pseudomallei MSHR346 7889950 YP_002895930.1 CDS GBP346_A1209 NC_012695.1 1162469 1164301 R identified by match to protein family HMM PF00723; glycosyl hydrolase, family 15 complement(1162469..1164301) Burkholderia pseudomallei MSHR346 7888852 YP_002895931.1 CDS GBP346_A1210 NC_012695.1 1164257 1164481 D hypothetical protein 1164257..1164481 Burkholderia pseudomallei MSHR346 7889562 YP_002895932.1 CDS GBP346_A1211 NC_012695.1 1164478 1165713 D 6-phosphogluconolactonase 1164478..1165713 Burkholderia pseudomallei MSHR346 7890052 YP_002895933.1 CDS GBP346_A1212 NC_012695.1 1165980 1171571 R identified by match to protein family HMM PF01580; match to protein family HMM PF09397; cell divisionftsk/spoiiie complement(1165980..1171571) Burkholderia pseudomallei MSHR346 7890645 YP_002895934.1 CDS GBP346_A1213 NC_012695.1 1171743 1172291 R identified by match to protein family HMM PF03724; hypothetical protein complement(1171743..1172291) Burkholderia pseudomallei MSHR346 7888984 YP_002895935.1 CDS GBP346_A1214 NC_012695.1 1172394 1172732 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1172394..1172732 Burkholderia pseudomallei MSHR346 7890086 YP_002895936.1 CDS purT NC_012695.1 1173024 1174238 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1173024..1174238 Burkholderia pseudomallei MSHR346 7889071 YP_002895937.1 CDS GBP346_A1216 NC_012695.1 1174408 1174572 D putative lipoprotein 1174408..1174572 Burkholderia pseudomallei MSHR346 7888653 YP_002895938.1 CDS GBP346_A1217 NC_012695.1 1174631 1175017 D periplasmic protein 1174631..1175017 Burkholderia pseudomallei MSHR346 7890493 YP_002895939.1 CDS GBP346_A1218 NC_012695.1 1175037 1175231 D hypothetical protein 1175037..1175231 Burkholderia pseudomallei MSHR346 7889668 YP_002895940.1 CDS GBP346_A1219 NC_012695.1 1175315 1175632 D ATP-dependent RNA helicase RhlE 1175315..1175632 Burkholderia pseudomallei MSHR346 7886898 YP_002895941.1 CDS GBP346_A1220 NC_012695.1 1175646 1177091 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; dead/deah box helicase 1175646..1177091 Burkholderia pseudomallei MSHR346 7890207 YP_002895942.1 CDS GBP346_A1221 NC_012695.1 1177416 1177541 R hypothetical protein complement(1177416..1177541) Burkholderia pseudomallei MSHR346 7888262 YP_002895943.1 CDS GBP346_A1222 NC_012695.1 1177565 1178458 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(1177565..1178458) Burkholderia pseudomallei MSHR346 7890695 YP_002895944.1 CDS GBP346_A1223 NC_012695.1 1178502 1179401 R identified by match to protein family HMM PF00581; rhodanese superfamily protein complement(1178502..1179401) Burkholderia pseudomallei MSHR346 7889830 YP_002895945.1 CDS GBP346_A1224 NC_012695.1 1179508 1179846 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, Fis family 1179508..1179846 Burkholderia pseudomallei MSHR346 7888274 YP_002895946.1 CDS dnaE NC_012695.1 1180023 1183547 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1180023..1183547 Burkholderia pseudomallei MSHR346 7887355 YP_002895947.1 CDS msbA NC_012695.1 1183587 1185377 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02203; lipid A export permease/ATP-binding protein MsbA 1183587..1185377 Burkholderia pseudomallei MSHR346 7888796 YP_002895948.1 CDS GBP346_A1227 NC_012695.1 1185431 1186513 D identified by match to protein family HMM PF00534; lipooligosaccharide glycosyl transferase G 1185431..1186513 Burkholderia pseudomallei MSHR346 7889969 YP_002895949.1 CDS GBP346_A1228 NC_012695.1 1186861 1187940 D identified by match to protein family HMM PF01075; heptosyltransferase 1186861..1187940 Burkholderia pseudomallei MSHR346 7890544 YP_002895950.1 CDS GBP346_A1229 NC_012695.1 1187937 1189241 D hypothetical protein 1187937..1189241 Burkholderia pseudomallei MSHR346 7888624 YP_002895951.1 CDS GBP346_A1230 NC_012695.1 1189238 1190500 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 1189238..1190500 Burkholderia pseudomallei MSHR346 7889988 YP_002895952.1 CDS GBP346_A1231 NC_012695.1 1190587 1191759 D identified by match to protein family HMM PF01075; putative lipopolysaccharide heptosyltransferase III 1190587..1191759 Burkholderia pseudomallei MSHR346 7888179 YP_002895953.1 CDS GBP346_A1232 NC_012695.1 1192026 1192790 R identified by match to protein family HMM PF00535; lipopolysaccharide core biosynthesis glycosyltransferase WaaE complement(1192026..1192790) Burkholderia pseudomallei MSHR346 7886749 YP_002895954.1 CDS GBP346_A1233 NC_012695.1 1193248 1193628 D hypothetical protein 1193248..1193628 Burkholderia pseudomallei MSHR346 7886978 YP_002895955.1 CDS GBP346_A1234 NC_012695.1 1193907 1194500 R hypothetical protein complement(1193907..1194500) Burkholderia pseudomallei MSHR346 7887122 YP_002895956.1 CDS GBP346_A1235 NC_012695.1 1194804 1196057 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(1194804..1196057) Burkholderia pseudomallei MSHR346 7890952 YP_002895957.1 CDS GBP346_A1236 NC_012695.1 1196054 1197034 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; PRC-barrel domain protein complement(1196054..1197034) Burkholderia pseudomallei MSHR346 7889364 YP_002895958.1 CDS GBP346_A1237 NC_012695.1 1197388 1197504 R hypothetical protein complement(1197388..1197504) Burkholderia pseudomallei MSHR346 7890114 YP_002895959.1 CDS GBP346_A1238 NC_012695.1 1197758 1198210 R identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; carboxymuconolactone decarboxylase family protein complement(1197758..1198210) Burkholderia pseudomallei MSHR346 7890044 YP_002895960.1 CDS GBP346_A1239 NC_012695.1 1198706 1199599 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957; RNA polymerase sigma-70 factor, TIGR02947 family complement(1198706..1199599) Burkholderia pseudomallei MSHR346 7890124 YP_002895961.1 CDS GBP346_A1240 NC_012695.1 1199777 1200211 R hypothetical protein complement(1199777..1200211) Burkholderia pseudomallei MSHR346 7886972 YP_002895962.1 CDS GBP346_A1242 NC_012695.1 1200237 1200353 D hypothetical protein 1200237..1200353 Burkholderia pseudomallei MSHR346 7888160 YP_002895963.1 CDS GBP346_A1241 NC_012695.1 1200347 1200640 R hypothetical protein complement(1200347..1200640) Burkholderia pseudomallei MSHR346 7886731 YP_002895964.1 CDS GBP346_A1243 NC_012695.1 1200963 1201376 R hypothetical protein complement(1200963..1201376) Burkholderia pseudomallei MSHR346 7887279 YP_002895965.1 CDS GBP346_A1244 NC_012695.1 1201364 1201690 D hypothetical protein 1201364..1201690 Burkholderia pseudomallei MSHR346 7890475 YP_002895966.1 CDS GBP346_A1245 NC_012695.1 1201720 1202118 D hypothetical protein 1201720..1202118 Burkholderia pseudomallei MSHR346 7889064 YP_002895967.1 CDS GBP346_A1246 NC_012695.1 1202810 1203526 D identified by match to protein family HMM TIGR03398; putative phospholipase C accessory protein 1202810..1203526 Burkholderia pseudomallei MSHR346 7886718 YP_002895968.1 CDS GBP346_A1247 NC_012695.1 1203600 1204985 D hypothetical protein 1203600..1204985 Burkholderia pseudomallei MSHR346 7888528 YP_002895969.1 CDS GBP346_A1248 NC_012695.1 1205013 1206401 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease complement(1205013..1206401) Burkholderia pseudomallei MSHR346 7887008 YP_002895970.1 CDS GBP346_A1249 NC_012695.1 1206366 1206656 D hypothetical protein 1206366..1206656 Burkholderia pseudomallei MSHR346 7889012 YP_002895971.1 CDS GBP346_A1250 NC_012695.1 1206719 1208185 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family complement(1206719..1208185) Burkholderia pseudomallei MSHR346 7888308 YP_002895972.1 CDS maf_1 NC_012695.1 1208194 1208823 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1208194..1208823) Burkholderia pseudomallei MSHR346 7887378 YP_002895973.1 CDS GBP346_A1252 NC_012695.1 1208876 1209346 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1208876..1209346) Burkholderia pseudomallei MSHR346 7888170 YP_002895974.1 CDS GBP346_A1253 NC_012695.1 1209403 1209867 R identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap domain protein complement(1209403..1209867) Burkholderia pseudomallei MSHR346 7890025 YP_002895975.1 CDS nadD NC_012695.1 1209872 1210624 R catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase complement(1209872..1210624) Burkholderia pseudomallei MSHR346 7890871 YP_002895976.1 CDS hemF NC_012695.1 1210621 1211544 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(1210621..1211544) Burkholderia pseudomallei MSHR346 7887992 YP_002895977.1 CDS purD NC_012695.1 1211675 1212952 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1211675..1212952) Burkholderia pseudomallei MSHR346 7888936 YP_002895978.1 CDS GBP346_A1257 NC_012695.1 1213063 1213791 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(1213063..1213791) Burkholderia pseudomallei MSHR346 7888323 YP_002895979.1 CDS GBP346_A1258 NC_012695.1 1213831 1214157 R identified by glimmer; putative; hypothetical protein complement(1213831..1214157) Burkholderia pseudomallei MSHR346 7889573 YP_002895980.1 CDS upp NC_012695.1 1214196 1214846 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1214196..1214846) Burkholderia pseudomallei MSHR346 7887879 YP_002895981.1 CDS GBP346_A1260 NC_012695.1 1215104 1215883 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 1215104..1215883 Burkholderia pseudomallei MSHR346 7887591 YP_002895982.1 CDS mgsA NC_012695.1 1216122 1216514 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1216122..1216514 Burkholderia pseudomallei MSHR346 7888446 YP_002895983.1 CDS GBP346_A1262 NC_012695.1 1217409 1218383 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; NADPH:quinone reductase 1217409..1218383 Burkholderia pseudomallei MSHR346 7888298 YP_002895984.1 CDS GBP346_A1263 NC_012695.1 1218389 1218679 D hypothetical protein 1218389..1218679 Burkholderia pseudomallei MSHR346 7890805 YP_002895985.1 CDS kdpF NC_012695.1 1218809 1218940 D identified by match to protein family HMM PF09604; hypothetical protein 1218809..1218940 Burkholderia pseudomallei MSHR346 7889251 YP_002895986.1 CDS kdpA NC_012695.1 1218937 1220745 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1218937..1220745 Burkholderia pseudomallei MSHR346 7887337 YP_002895987.1 CDS kdpB NC_012695.1 1220742 1222901 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1220742..1222901 Burkholderia pseudomallei MSHR346 7887429 YP_002895988.1 CDS kdpC NC_012695.1 1222914 1223495 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 1222914..1223495 Burkholderia pseudomallei MSHR346 7889627 YP_002895989.1 CDS GBP346_A1268 NC_012695.1 1223503 1223766 D hypothetical protein 1223503..1223766 Burkholderia pseudomallei MSHR346 7888696 YP_002895990.1 CDS GBP346_A1269 NC_012695.1 1223763 1226744 D identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor protein KdpD 1223763..1226744 Burkholderia pseudomallei MSHR346 7889451 YP_002895991.1 CDS GBP346_A1270 NC_012695.1 1226731 1227435 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; KDP operon transcriptional regulatory protein KdpE 1226731..1227435 Burkholderia pseudomallei MSHR346 7888044 YP_002895992.1 CDS GBP346_A1271 NC_012695.1 1227620 1227787 R hypothetical protein complement(1227620..1227787) Burkholderia pseudomallei MSHR346 7889922 YP_002895993.1 CDS GBP346_A1272 NC_012695.1 1227808 1228104 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03891; hypothetical protein 1227808..1228104 Burkholderia pseudomallei MSHR346 7890386 YP_002895994.1 CDS GBP346_A1273 NC_012695.1 1228320 1228640 D identified by match to protein family HMM PF00893; SugE protein 1228320..1228640 Burkholderia pseudomallei MSHR346 7887546 YP_002895995.1 CDS GBP346_A1274 NC_012695.1 1228832 1229449 D hypothetical protein 1228832..1229449 Burkholderia pseudomallei MSHR346 7889824 YP_002895996.1 CDS GBP346_A1275 NC_012695.1 1229446 1232097 D identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 1229446..1232097 Burkholderia pseudomallei MSHR346 7888263 YP_002895997.1 CDS GBP346_A1276 NC_012695.1 1232094 1232216 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative globin 1232094..1232216 Burkholderia pseudomallei MSHR346 7887349 YP_002895998.1 CDS GBP346_A1277 NC_012695.1 1232197 1232607 D identified by match to protein family HMM PF01152; globin family protein 1232197..1232607 Burkholderia pseudomallei MSHR346 7890887 YP_002895999.1 CDS GBP346_A1278 NC_012695.1 1232629 1232757 D hypothetical protein 1232629..1232757 Burkholderia pseudomallei MSHR346 7889219 YP_002896000.1 CDS GBP346_A1279 NC_012695.1 1232718 1233449 D identified by match to protein family HMM PF07973; threonyl and alanyl tRNA synthetase domain protein 1232718..1233449 Burkholderia pseudomallei MSHR346 7888926 YP_002896001.1 CDS GBP346_A1280 NC_012695.1 1233446 1234087 D identified by match to protein family HMM PF06041; hypothetical protein 1233446..1234087 Burkholderia pseudomallei MSHR346 7887772 YP_002896002.1 CDS GBP346_A1281 NC_012695.1 1234431 1235825 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1234431..1235825 Burkholderia pseudomallei MSHR346 7889457 YP_002896003.1 CDS GBP346_A1282 NC_012695.1 1236091 1237371 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 1236091..1237371 Burkholderia pseudomallei MSHR346 7888411 YP_002896004.1 CDS GBP346_A1283 NC_012695.1 1237421 1237546 D identified by glimmer; putative; hypothetical protein 1237421..1237546 Burkholderia pseudomallei MSHR346 7890363 YP_002896005.1 CDS GBP346_A1284 NC_012695.1 1237682 1239589 R glycosyltransferase of PMT family complement(1237682..1239589) Burkholderia pseudomallei MSHR346 7888543 YP_002896006.1 CDS GBP346_A1286 NC_012695.1 1240083 1240841 R Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase complement(1240083..1240841) Burkholderia pseudomallei MSHR346 7886870 YP_002896007.1 CDS GBP346_A1287 NC_012695.1 1241259 1241846 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein complement(1241259..1241846) Burkholderia pseudomallei MSHR346 7889643 YP_002896008.1 CDS GBP346_A1288 NC_012695.1 1241843 1242604 R identified by match to protein family HMM PF00440; transcriptional reguator, TetR family complement(1241843..1242604) Burkholderia pseudomallei MSHR346 7890342 YP_002896009.1 CDS GBP346_A1289 NC_012695.1 1242799 1243344 R identified by match to protein family HMM PF01219; prokaryotic diacylglycerol kinase complement(1242799..1243344) Burkholderia pseudomallei MSHR346 7889724 YP_002896010.1 CDS GBP346_A1290 NC_012695.1 1243353 1244387 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family complement(1243353..1244387) Burkholderia pseudomallei MSHR346 7889753 YP_002896011.1 CDS GBP346_A1291 NC_012695.1 1244409 1245347 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(1244409..1245347) Burkholderia pseudomallei MSHR346 7888503 YP_002896012.1 CDS GBP346_A1292 NC_012695.1 1245438 1245947 R identified by match to protein family HMM PF06271; RDD family protein complement(1245438..1245947) Burkholderia pseudomallei MSHR346 7887488 YP_002896013.1 CDS GBP346_A1293 NC_012695.1 1245954 1246709 R hypothetical protein complement(1245954..1246709) Burkholderia pseudomallei MSHR346 7888313 YP_002896014.1 CDS GBP346_A1294 NC_012695.1 1246740 1247162 R hypothetical protein complement(1246740..1247162) Burkholderia pseudomallei MSHR346 7888774 YP_002896015.1 CDS GBP346_A1295 NC_012695.1 1247159 1247719 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(1247159..1247719) Burkholderia pseudomallei MSHR346 7888432 YP_002896016.1 CDS GBP346_A1296 NC_012695.1 1247847 1247987 D hypothetical protein 1247847..1247987 Burkholderia pseudomallei MSHR346 7889612 YP_002896017.1 CDS ilvB NC_012695.1 1248115 1249878 D acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 1248115..1249878 Burkholderia pseudomallei MSHR346 7890226 YP_002896018.1 CDS ilvH NC_012695.1 1249990 1250481 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1249990..1250481 Burkholderia pseudomallei MSHR346 7887573 YP_002896019.1 CDS ilvC_1 NC_012695.1 1250564 1251580 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1250564..1251580 Burkholderia pseudomallei MSHR346 7888050 YP_002896020.1 CDS GBP346_A1300 NC_012695.1 1251702 1252352 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1251702..1252352 Burkholderia pseudomallei MSHR346 7890777 YP_002896021.1 CDS GBP346_A1301 NC_012695.1 1252369 1253241 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 1252369..1253241 Burkholderia pseudomallei MSHR346 7890303 YP_002896022.1 CDS leuA NC_012695.1 1253601 1255148 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1253601..1255148 Burkholderia pseudomallei MSHR346 7890159 YP_002896023.1 CDS GBP346_A1303 NC_012695.1 1255283 1256830 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; inorganic anion transporter, SulP family complement(1255283..1256830) Burkholderia pseudomallei MSHR346 7887718 YP_002896024.1 CDS GBP346_A1304 NC_012695.1 1256887 1257522 R identified by match to protein family HMM PF00484; carbonate dehydratase complement(1256887..1257522) Burkholderia pseudomallei MSHR346 7890452 YP_002896025.1 CDS GBP346_A1305 NC_012695.1 1257966 1258466 R putative lipoprotein complement(1257966..1258466) Burkholderia pseudomallei MSHR346 7890627 YP_002896026.1 CDS GBP346_A1306 NC_012695.1 1258465 1258893 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1258465..1258893 Burkholderia pseudomallei MSHR346 7890688 YP_002896027.1 CDS GBP346_A1307 NC_012695.1 1258845 1260122 D ABC-type branched-chain amino acid transport system, periplasmic component 1258845..1260122 Burkholderia pseudomallei MSHR346 7888456 YP_002896028.1 CDS rpsO NC_012695.1 1260228 1260497 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1260228..1260497 Burkholderia pseudomallei MSHR346 7890749 YP_002896029.1 CDS pnp NC_012695.1 1260801 1262942 D identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591; polynucleotide phosphorylase/polyadenylase 1260801..1262942 Burkholderia pseudomallei MSHR346 7890930 YP_002896030.1 CDS GBP346_A1310 NC_012695.1 1263056 1264075 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02824; NADPH:quinone reductase 1263056..1264075 Burkholderia pseudomallei MSHR346 7890515 YP_002896031.1 CDS tpiA NC_012695.1 1264135 1264935 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1264135..1264935 Burkholderia pseudomallei MSHR346 7887531 YP_002896032.1 CDS secG NC_012695.1 1265015 1265392 D identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 1265015..1265392 Burkholderia pseudomallei MSHR346 7887793 YP_002896033.1 CDS GBP346_A1314 NC_012695.1 1265741 1266100 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1265741..1266100 Burkholderia pseudomallei MSHR346 7889176 YP_002896034.1 CDS GBP346_A1315 NC_012695.1 1266181 1266642 D identified by match to protein family HMM PF01058; match to protein family HMM TIGR01957; NADH-quinone oxidoreductase, b subunit 1266181..1266642 Burkholderia pseudomallei MSHR346 7887412 YP_002896035.1 CDS GBP346_A1316 NC_012695.1 1266663 1267265 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1266663..1267265 Burkholderia pseudomallei MSHR346 7887901 YP_002896036.1 CDS nuoD NC_012695.1 1267277 1268530 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1267277..1268530 Burkholderia pseudomallei MSHR346 7890015 YP_002896037.1 CDS GBP346_A1318 NC_012695.1 1268699 1269184 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1268699..1269184 Burkholderia pseudomallei MSHR346 7889512 YP_002896038.1 CDS nuoF NC_012695.1 1269181 1270491 D identified by match to protein family HMM PF01512; match to protein family HMM TIGR01959; NADH oxidoreductase (quinone), f subunit 1269181..1270491 Burkholderia pseudomallei MSHR346 7888213 YP_002896039.1 CDS nuoG NC_012695.1 1270574 1272904 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1270574..1272904 Burkholderia pseudomallei MSHR346 7887819 YP_002896040.1 CDS GBP346_A1321 NC_012695.1 1272905 1273969 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1272905..1273969 Burkholderia pseudomallei MSHR346 7887155 YP_002896041.1 CDS GBP346_A1322 NC_012695.1 1273985 1274473 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1273985..1274473 Burkholderia pseudomallei MSHR346 7887176 YP_002896042.1 CDS GBP346_A1323 NC_012695.1 1274583 1275239 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1274583..1275239 Burkholderia pseudomallei MSHR346 7888065 YP_002896043.1 CDS GBP346_A1324 NC_012695.1 1275258 1275563 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1275258..1275563 Burkholderia pseudomallei MSHR346 7890566 YP_002896044.1 CDS GBP346_A1325 NC_012695.1 1275581 1277620 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1275581..1277620 Burkholderia pseudomallei MSHR346 7888325 YP_002896045.1 CDS nuoM NC_012695.1 1277636 1279126 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1277636..1279126 Burkholderia pseudomallei MSHR346 7890751 YP_002896046.1 CDS nuoN_1 NC_012695.1 1279151 1280623 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1279151..1280623 Burkholderia pseudomallei MSHR346 7890276 YP_002896047.1 CDS GBP346_A1328 NC_012695.1 1280623 1280928 D hypothetical protein 1280623..1280928 Burkholderia pseudomallei MSHR346 7890744 YP_002896048.1 CDS GBP346_A1329 NC_012695.1 1280965 1281555 D identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family 1280965..1281555 Burkholderia pseudomallei MSHR346 7888521 YP_002896049.1 CDS GBP346_A1330 NC_012695.1 1281707 1282129 D identified by match to protein family HMM PF06676; hypothetical protein 1281707..1282129 Burkholderia pseudomallei MSHR346 7890594 YP_002896050.1 CDS GBP346_A1331 NC_012695.1 1282190 1283386 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 1282190..1283386 Burkholderia pseudomallei MSHR346 7888318 YP_002896051.1 CDS GBP346_A1332 NC_012695.1 1283398 1284531 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 1283398..1284531 Burkholderia pseudomallei MSHR346 7887902 YP_002896052.1 CDS GBP346_A1333 NC_012695.1 1284572 1285030 D identified by match to protein family HMM PF01575; MoaC domain protein 1284572..1285030 Burkholderia pseudomallei MSHR346 7887022 YP_002896053.1 CDS GBP346_A1334 NC_012695.1 1285027 1285509 D identified by match to protein family HMM PF01575; nodulation protein N 1285027..1285509 Burkholderia pseudomallei MSHR346 7887680 YP_002896054.1 CDS GBP346_A1335 NC_012695.1 1285602 1286864 D parallel beta-helix repeat protein 1285602..1286864 Burkholderia pseudomallei MSHR346 7889375 YP_002896055.1 CDS GBP346_A1336 NC_012695.1 1286861 1287052 D identified by glimmer; putative; hypothetical protein 1286861..1287052 Burkholderia pseudomallei MSHR346 7888662 YP_002896056.1 CDS GBP346_A1337 NC_012695.1 1287142 1288368 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein complement(1287142..1288368) Burkholderia pseudomallei MSHR346 7888842 YP_002896057.1 CDS GBP346_A1338 NC_012695.1 1288412 1289518 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(1288412..1289518) Burkholderia pseudomallei MSHR346 7889551 YP_002896058.1 CDS GBP346_A1339 NC_012695.1 1289546 1290259 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1289546..1290259) Burkholderia pseudomallei MSHR346 7888726 YP_002896059.1 CDS GBP346_A1340 NC_012695.1 1290269 1291060 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1290269..1291060) Burkholderia pseudomallei MSHR346 7890768 YP_002896060.1 CDS GBP346_A1341 NC_012695.1 1291099 1291218 D hypothetical protein 1291099..1291218 Burkholderia pseudomallei MSHR346 7887013 YP_002896061.1 CDS GBP346_A1342 NC_012695.1 1291300 1291956 D identified by match to protein family HMM PF02798; glutathione S-transferase family protein 1291300..1291956 Burkholderia pseudomallei MSHR346 7888734 YP_002896062.1 CDS GBP346_A1343 NC_012695.1 1292176 1293351 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(1292176..1293351) Burkholderia pseudomallei MSHR346 7887883 YP_002896063.1 CDS GBP346_A1344 NC_012695.1 1293397 1294029 R nucleotide binding protein PINc complement(1293397..1294029) Burkholderia pseudomallei MSHR346 7887587 YP_002896064.1 CDS GBP346_A1345 NC_012695.1 1294123 1294905 D identified by match to protein family HMM PF03883; hypothetical protein 1294123..1294905 Burkholderia pseudomallei MSHR346 7890458 YP_002896065.1 CDS GBP346_A1346 NC_012695.1 1294964 1296118 D identified by match to protein family HMM PF00246; zinc carboxypeptidase family protein 1294964..1296118 Burkholderia pseudomallei MSHR346 7887706 YP_002896066.1 CDS GBP346_A1347 NC_012695.1 1296329 1296949 R hypothetical protein complement(1296329..1296949) Burkholderia pseudomallei MSHR346 7887828 YP_002896067.1 CDS GBP346_A1348 NC_012695.1 1297109 1297783 R hypothetical protein complement(1297109..1297783) Burkholderia pseudomallei MSHR346 7887526 YP_002896068.1 CDS GBP346_A1349 NC_012695.1 1297850 1298941 R identified by match to protein family HMM PF00196; DNA-binding response regulator complement(1297850..1298941) Burkholderia pseudomallei MSHR346 7889347 YP_002896069.1 CDS GBP346_A1350 NC_012695.1 1298892 1300109 R hypothetical protein complement(1298892..1300109) Burkholderia pseudomallei MSHR346 7890553 YP_002896070.1 CDS GBP346_A1352 NC_012695.1 1300565 1300681 D hypothetical protein 1300565..1300681 Burkholderia pseudomallei MSHR346 7890948 YP_002896071.1 CDS GBP346_A1357 NC_012695.1 1306830 1308719 D identified by match to protein family HMM PF00557; metallopeptidase family M24 1306830..1308719 Burkholderia pseudomallei MSHR346 7889162 YP_002896072.1 CDS GBP346_A1358 NC_012695.1 1308865 1309938 R fatty acid desaturase domain protein complement(1308865..1309938) Burkholderia pseudomallei MSHR346 7888569 YP_002896073.1 CDS GBP346_A1359 NC_012695.1 1310158 1311168 D identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1310158..1311168 Burkholderia pseudomallei MSHR346 7890804 YP_002896074.1 CDS GBP346_A1360 NC_012695.1 1311488 1312762 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1311488..1312762 Burkholderia pseudomallei MSHR346 7889640 YP_002896075.1 CDS GBP346_A1361 NC_012695.1 1312782 1313063 D hypothetical protein 1312782..1313063 Burkholderia pseudomallei MSHR346 7887565 YP_002896076.1 CDS GBP346_A1362 NC_012695.1 1313097 1313786 D putative transposase 1313097..1313786 Burkholderia pseudomallei MSHR346 7889381 YP_002896077.1 CDS GBP346_A1363 NC_012695.1 1313950 1314069 D identified by glimmer; putative; hypothetical protein 1313950..1314069 Burkholderia pseudomallei MSHR346 7889060 YP_002896078.1 CDS GBP346_A1364 NC_012695.1 1314207 1315232 R identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR01728; putative aliphatic sulfonates-binding protein complement(1314207..1315232) Burkholderia pseudomallei MSHR346 7888671 YP_002896079.1 CDS GBP346_A1365 NC_012695.1 1315229 1315342 R identified by glimmer; putative; hypothetical protein complement(1315229..1315342) Burkholderia pseudomallei MSHR346 7887506 YP_002896080.1 CDS GBP346_A1366 NC_012695.1 1315440 1315790 R hypothetical protein complement(1315440..1315790) Burkholderia pseudomallei MSHR346 7888231 YP_002896081.1 CDS GBP346_A1367 NC_012695.1 1315811 1316053 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1315811..1316053 Burkholderia pseudomallei MSHR346 7887293 YP_002896082.1 CDS GBP346_A1368 NC_012695.1 1316121 1317848 D identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensory box histidine kinase/response regulator 1316121..1317848 Burkholderia pseudomallei MSHR346 7887156 YP_002896083.1 CDS GBP346_A1369 NC_012695.1 1318072 1319403 D hypothetical protein 1318072..1319403 Burkholderia pseudomallei MSHR346 7889422 YP_002896084.1 CDS GBP346_A1370 NC_012695.1 1319443 1319589 D hypothetical protein 1319443..1319589 Burkholderia pseudomallei MSHR346 7890836 YP_002896085.1 CDS GBP346_A1371 NC_012695.1 1319865 1320533 D cytochrome c, class I 1319865..1320533 Burkholderia pseudomallei MSHR346 7890712 YP_002896086.1 CDS GBP346_A1372 NC_012695.1 1320533 1321825 D identified by match to protein family HMM PF00034; cytochrome c family protein 1320533..1321825 Burkholderia pseudomallei MSHR346 7889295 YP_002896087.1 CDS GBP346_A1373 NC_012695.1 1321833 1322015 D hypothetical protein 1321833..1322015 Burkholderia pseudomallei MSHR346 7890376 YP_002896088.1 CDS GBP346_A1374 NC_012695.1 1322043 1322600 D identified by match to protein family HMM PF00116; cytochrome c oxidase, subunit II 1322043..1322600 Burkholderia pseudomallei MSHR346 7890912 YP_002896089.1 CDS GBP346_A1375 NC_012695.1 1322608 1324212 D identified by match to protein family HMM PF00115; cytochrome c oxidase subunit 1 1322608..1324212 Burkholderia pseudomallei MSHR346 7887918 YP_002896090.1 CDS GBP346_A1376 NC_012695.1 1324209 1324997 D identified by match to protein family HMM PF00034; cytochrome c family protein 1324209..1324997 Burkholderia pseudomallei MSHR346 7890874 YP_002896091.1 CDS GBP346_A1377 NC_012695.1 1325046 1325195 D hypothetical protein 1325046..1325195 Burkholderia pseudomallei MSHR346 7890706 YP_002896092.1 CDS GBP346_A1378 NC_012695.1 1325551 1327005 R identified by match to protein family HMM PF08668; hdod domain family protein complement(1325551..1327005) Burkholderia pseudomallei MSHR346 7890576 YP_002896093.1 CDS GBP346_A1379 NC_012695.1 1327040 1328875 R identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box diguanylate cyclase/cyclic diguanylate phosphodiesterase complement(1327040..1328875) Burkholderia pseudomallei MSHR346 7888087 YP_002896094.1 CDS GBP346_A1380 NC_012695.1 1328844 1328969 D identified by glimmer; putative; hypothetical protein 1328844..1328969 Burkholderia pseudomallei MSHR346 7887490 YP_002896095.1 CDS GBP346_A1381 NC_012695.1 1329075 1329623 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/TSA family protein 1329075..1329623 Burkholderia pseudomallei MSHR346 7889710 YP_002896096.1 CDS GBP346_A1382 NC_012695.1 1330147 1330776 R identified by match to protein family HMM PF01113; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase complement(1330147..1330776) Burkholderia pseudomallei MSHR346 7890172 YP_002896097.1 CDS GBP346_A1383 NC_012695.1 1330875 1331057 D hypothetical protein 1330875..1331057 Burkholderia pseudomallei MSHR346 7887206 YP_002896098.1 CDS GBP346_A1384 NC_012695.1 1331069 1331395 R hypothetical protein complement(1331069..1331395) Burkholderia pseudomallei MSHR346 7888074 YP_002896099.1 CDS GBP346_A1385 NC_012695.1 1331392 1334694 R identified by match to protein family HMM PF00873; multidrug resistance protein MdtC (Multidrug transporter mdtC) complement(1331392..1334694) Burkholderia pseudomallei MSHR346 7888285 YP_002896100.1 CDS GBP346_A1386 NC_012695.1 1334695 1337805 R identified by match to protein family HMM PF00873; multidrug resistance protein MdtB (Multidrug transporter mdtB) complement(1334695..1337805) Burkholderia pseudomallei MSHR346 7886699 YP_002896101.1 CDS GBP346_A1387 NC_012695.1 1337819 1339138 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane fusion protein MdtA complement(1337819..1339138) Burkholderia pseudomallei MSHR346 7888795 YP_002896102.1 CDS GBP346_A1388 NC_012695.1 1339160 1339279 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1339160..1339279 Burkholderia pseudomallei MSHR346 7889491 YP_002896103.1 CDS GBP346_A1389 NC_012695.1 1339622 1340449 R identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family complement(1339622..1340449) Burkholderia pseudomallei MSHR346 7887674 YP_002896104.1 CDS GBP346_A1390 NC_012695.1 1340385 1340498 D hypothetical protein 1340385..1340498 Burkholderia pseudomallei MSHR346 7888987 YP_002896105.1 CDS GBP346_A1391 NC_012695.1 1340504 1340638 D hypothetical protein 1340504..1340638 Burkholderia pseudomallei MSHR346 7889925 YP_002896106.1 CDS GBP346_A1392 NC_012695.1 1340997 1342958 R alkaline phosphatase complement(1340997..1342958) Burkholderia pseudomallei MSHR346 7889273 YP_002896107.1 CDS GBP346_A1393 NC_012695.1 1342919 1343269 R hypothetical protein complement(1342919..1343269) Burkholderia pseudomallei MSHR346 7887999 YP_002896108.1 CDS GBP346_A1394 NC_012695.1 1343275 1343730 D hypothetical protein 1343275..1343730 Burkholderia pseudomallei MSHR346 7888891 YP_002896109.1 CDS GBP346_A1395 NC_012695.1 1343820 1344281 D identified by match to protein family HMM PF02082; Rrf2 family protein 1343820..1344281 Burkholderia pseudomallei MSHR346 7889302 YP_002896110.1 CDS GBP346_A1396 NC_012695.1 1344278 1344397 D identified by glimmer; putative; hypothetical protein 1344278..1344397 Burkholderia pseudomallei MSHR346 7887019 YP_002896111.1 CDS GBP346_A1397 NC_012695.1 1344533 1345174 D identified by match to protein family HMM PF01370; match to protein family HMM PF05368; NAD-dependent epimerase/dehydratase 1344533..1345174 Burkholderia pseudomallei MSHR346 7890642 YP_002896112.1 CDS GBP346_A1398 NC_012695.1 1345960 1346616 R identified by match to protein family HMM PF05995; cysteine dioxygenase type I family complement(1345960..1346616) Burkholderia pseudomallei MSHR346 7888320 YP_002896113.1 CDS GBP346_A1399 NC_012695.1 1346763 1347230 D identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 1346763..1347230 Burkholderia pseudomallei MSHR346 7888507 YP_002896114.1 CDS GBP346_A1400 NC_012695.1 1347369 1348139 R identified by match to protein family HMM PF00005; ferric iron uptake ABC transporter (FeT) family, ATP-binding protein complement(1347369..1348139) Burkholderia pseudomallei MSHR346 7890042 YP_002896115.1 CDS GBP346_A1401 NC_012695.1 1348150 1349862 R identified by match to protein family HMM PF00528; ferric iron uptake ABC transporter (FeT) family, permease protein complement(1348150..1349862) Burkholderia pseudomallei MSHR346 7889549 YP_002896116.1 CDS GBP346_A1402 NC_012695.1 1349852 1350907 R identified by match to protein family HMM PF01547; ferric iron uptake ABC transporter complement(1349852..1350907) Burkholderia pseudomallei MSHR346 7890248 YP_002896117.1 CDS GBP346_A1403 NC_012695.1 1351031 1351150 D hypothetical protein 1351031..1351150 Burkholderia pseudomallei MSHR346 7889156 YP_002896118.1 CDS GBP346_A1404 NC_012695.1 1351147 1351326 D hypothetical protein 1351147..1351326 Burkholderia pseudomallei MSHR346 7887247 YP_002896119.1 CDS GBP346_A1405 NC_012695.1 1351478 1352842 R identified by match to protein family HMM PF00324; proline-specific permease ProY complement(1351478..1352842) Burkholderia pseudomallei MSHR346 7890457 YP_002896120.1 CDS GBP346_A1406 NC_012695.1 1352839 1353030 R hypothetical protein complement(1352839..1353030) Burkholderia pseudomallei MSHR346 7887450 YP_002896121.1 CDS GBP346_A1407 NC_012695.1 1353027 1355303 R identified by match to protein family HMM PF05976; hypothetical protein complement(1353027..1355303) Burkholderia pseudomallei MSHR346 7890541 YP_002896122.1 CDS GBP346_A1408 NC_012695.1 1355604 1355846 R hypothetical protein complement(1355604..1355846) Burkholderia pseudomallei MSHR346 7890051 YP_002896123.1 CDS recC NC_012695.1 1355907 1359251 D identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450; exodeoxyribonuclease V, gamma subunit 1355907..1359251 Burkholderia pseudomallei MSHR346 7887837 YP_002896124.1 CDS recB NC_012695.1 1359248 1363030 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609; exodeoxyribonuclease V, beta subunit 1359248..1363030 Burkholderia pseudomallei MSHR346 7887556 YP_002896125.1 CDS GBP346_A1411 NC_012695.1 1363027 1365723 D exodeoxyribonuclease V, alpha subunit 1363027..1365723 Burkholderia pseudomallei MSHR346 7890786 YP_002896126.1 CDS GBP346_A1412 NC_012695.1 1365720 1366124 D identified by match to protein family HMM PF00472; peptidyl-tRNA hydrolase domain protein 1365720..1366124 Burkholderia pseudomallei MSHR346 7888555 YP_002896127.1 CDS GBP346_A1413 NC_012695.1 1366542 1367825 R identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase complement(1366542..1367825) Burkholderia pseudomallei MSHR346 7886839 YP_002896128.1 CDS GBP346_A1414 NC_012695.1 1368294 1368785 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(1368294..1368785) Burkholderia pseudomallei MSHR346 7889115 YP_002896129.1 CDS GBP346_A1415 NC_012695.1 1368893 1369825 R identified by match to protein family HMM PF00892; permease of the drug/metabolite transporter complement(1368893..1369825) Burkholderia pseudomallei MSHR346 7888980 YP_002896130.1 CDS GBP346_A1416 NC_012695.1 1369952 1370074 D identified by glimmer; putative; hypothetical protein 1369952..1370074 Burkholderia pseudomallei MSHR346 7888622 YP_002896131.1 CDS GBP346_A1417 NC_012695.1 1370096 1370320 R putative lipoprotein complement(1370096..1370320) Burkholderia pseudomallei MSHR346 7889506 YP_002896132.1 CDS GBP346_A1418 NC_012695.1 1370572 1370784 R 17 kDa surface antigen complement(1370572..1370784) Burkholderia pseudomallei MSHR346 7890326 YP_002896133.1 CDS thiC NC_012695.1 1371008 1372939 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(1371008..1372939) Burkholderia pseudomallei MSHR346 7889835 YP_002896134.1 CDS GBP346_A1421 NC_012695.1 1373123 1373401 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1373123..1373401) Burkholderia pseudomallei MSHR346 7886893 YP_002896135.1 CDS GBP346_A1422 NC_012695.1 1373568 1373852 D identified by match to protein family HMM TIGR02953; pentapeptide mxkdx repeat protein 1373568..1373852 Burkholderia pseudomallei MSHR346 7890673 YP_002896136.1 CDS GBP346_A1423 NC_012695.1 1373891 1374016 D identified by glimmer; putative; hypothetical protein 1373891..1374016 Burkholderia pseudomallei MSHR346 7890664 YP_002896137.1 CDS GBP346_A1424 NC_012695.1 1374013 1375965 D identified by match to protein family HMM PF06764; cytochrome B561 1374013..1375965 Burkholderia pseudomallei MSHR346 7889101 YP_002896138.1 CDS GBP346_A1425 NC_012695.1 1375981 1376772 D identified by match to protein family HMM PF00174; oxidoreductase, molybdopterin-binding 1375981..1376772 Burkholderia pseudomallei MSHR346 7888141 YP_002896139.1 CDS GBP346_A1426 NC_012695.1 1377088 1377222 D identified by glimmer; putative; hypothetical protein 1377088..1377222 Burkholderia pseudomallei MSHR346 7889767 YP_002896140.1 CDS GBP346_A1427 NC_012695.1 1377226 1378161 D identified by match to protein family HMM PF00892; integral membrane protein DUF6 1377226..1378161 Burkholderia pseudomallei MSHR346 7887550 YP_002896141.1 CDS GBP346_A1428 NC_012695.1 1378579 1379868 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(1378579..1379868) Burkholderia pseudomallei MSHR346 7889684 YP_002896142.1 CDS GBP346_A1429 NC_012695.1 1379783 1379935 D hypothetical protein 1379783..1379935 Burkholderia pseudomallei MSHR346 7890824 YP_002896143.1 CDS GBP346_A1430 NC_012695.1 1380090 1380842 D identified by match to protein family HMM PF03988; hypothetical protein 1380090..1380842 Burkholderia pseudomallei MSHR346 7888322 YP_002896144.1 CDS GBP346_A1431 NC_012695.1 1380992 1381402 D hypothetical protein 1380992..1381402 Burkholderia pseudomallei MSHR346 7887660 YP_002896145.1 CDS GBP346_A1432 NC_012695.1 1381751 1382578 R identified by match to protein family HMM PF00149; 3',5'-cyclic-nucleotide phosphodiesterase complement(1381751..1382578) Burkholderia pseudomallei MSHR346 7888707 YP_002896146.1 CDS GBP346_A1433 NC_012695.1 1382794 1383888 R identified by match to protein family HMM PF00005; match to protein family HMM PF08402; sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2) complement(1382794..1383888) Burkholderia pseudomallei MSHR346 7887624 YP_002896147.1 CDS GBP346_A1434 NC_012695.1 1383819 1383998 R hypothetical protein complement(1383819..1383998) Burkholderia pseudomallei MSHR346 7889002 YP_002896148.1 CDS GBP346_A1435 NC_012695.1 1383998 1385098 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(1383998..1385098) Burkholderia pseudomallei MSHR346 7887254 YP_002896149.1 CDS GBP346_A1436 NC_012695.1 1385163 1385480 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1385163..1385480 Burkholderia pseudomallei MSHR346 7889155 YP_002896150.1 CDS GBP346_A1437 NC_012695.1 1385656 1385859 D hypothetical protein 1385656..1385859 Burkholderia pseudomallei MSHR346 7890174 YP_002896151.1 CDS GBP346_A1438 NC_012695.1 1386121 1386945 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(1386121..1386945) Burkholderia pseudomallei MSHR346 7890590 YP_002896152.1 CDS GBP346_A1439 NC_012695.1 1387040 1388101 R identified by match to protein family HMM PF01547; ABC transporter, periplasmic substrate-binding protein complement(1387040..1388101) Burkholderia pseudomallei MSHR346 7887029 YP_002896153.1 CDS GBP346_A1440 NC_012695.1 1388158 1389183 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional repressor, LacI family complement(1388158..1389183) Burkholderia pseudomallei MSHR346 7888813 YP_002896154.1 CDS GBP346_A1441 NC_012695.1 1389829 1390476 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1389829..1390476) Burkholderia pseudomallei MSHR346 7889746 YP_002896155.1 CDS GBP346_A1442 NC_012695.1 1390544 1390999 R hypothetical protein complement(1390544..1390999) Burkholderia pseudomallei MSHR346 7888922 YP_002896156.1 CDS GBP346_A1443 NC_012695.1 1391001 1391192 R hypothetical protein complement(1391001..1391192) Burkholderia pseudomallei MSHR346 7890349 YP_002896157.1 CDS GBP346_A1444 NC_012695.1 1391576 1392730 R hypothetical protein complement(1391576..1392730) Burkholderia pseudomallei MSHR346 7887864 YP_002896158.1 CDS GBP346_A1445 NC_012695.1 1392767 1392991 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1392767..1392991 Burkholderia pseudomallei MSHR346 7890123 YP_002896159.1 CDS GBP346_A1446 NC_012695.1 1393096 1394496 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(1393096..1394496) Burkholderia pseudomallei MSHR346 7890053 YP_002896160.1 CDS GBP346_A1447 NC_012695.1 1394473 1394619 D hypothetical protein 1394473..1394619 Burkholderia pseudomallei MSHR346 7888201 YP_002896161.1 CDS GBP346_A1448 NC_012695.1 1394705 1394968 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1394705..1394968) Burkholderia pseudomallei MSHR346 7886991 YP_002896162.1 CDS GBP346_A1449 NC_012695.1 1395113 1395739 D identified by match to protein family HMM PF07040; hypothetical protein 1395113..1395739 Burkholderia pseudomallei MSHR346 7886761 YP_002896163.1 CDS GBP346_A1450 NC_012695.1 1395792 1396589 D metal-binding integral membrane protein 1395792..1396589 Burkholderia pseudomallei MSHR346 7888580 YP_002896164.1 CDS GBP346_A1451 NC_012695.1 1396826 1396951 R hypothetical protein complement(1396826..1396951) Burkholderia pseudomallei MSHR346 7889987 YP_002896165.1 CDS GBP346_A1452 NC_012695.1 1396985 1397623 R identified by match to protein family HMM PF04299; negative transcriptional regulator complement(1396985..1397623) Burkholderia pseudomallei MSHR346 7889559 YP_002896166.1 CDS GBP346_A1453 NC_012695.1 1397745 1399286 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family 1397745..1399286 Burkholderia pseudomallei MSHR346 7889248 YP_002896167.1 CDS GBP346_A1454 NC_012695.1 1399529 1400023 R identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family complement(1399529..1400023) Burkholderia pseudomallei MSHR346 7886854 YP_002896168.1 CDS GBP346_A1455 NC_012695.1 1400075 1400245 D hypothetical protein 1400075..1400245 Burkholderia pseudomallei MSHR346 7890204 YP_002896169.1 CDS glmS_2 NC_012695.1 1400122 1402113 D identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase (isomerizing) 1400122..1402113 Burkholderia pseudomallei MSHR346 7888996 YP_002896170.1 CDS GBP346_A1457 NC_012695.1 1402348 1403679 R identified by match to protein family HMM PF03055; carotenoid oxygenase complement(1402348..1403679) Burkholderia pseudomallei MSHR346 7887908 YP_002896171.1 CDS GBP346_A1458 NC_012695.1 1403701 1404402 R hypothetical protein complement(1403701..1404402) Burkholderia pseudomallei MSHR346 7890902 YP_002896172.1 CDS GBP346_A1459 NC_012695.1 1404402 1404605 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1404402..1404605) Burkholderia pseudomallei MSHR346 7890661 YP_002896173.1 CDS GBP346_A1460 NC_012695.1 1404569 1405468 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain protein complement(1404569..1405468) Burkholderia pseudomallei MSHR346 7886869 YP_002896174.1 CDS GBP346_A1461 NC_012695.1 1405719 1406492 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1405719..1406492 Burkholderia pseudomallei MSHR346 7886913 YP_002896175.1 CDS GBP346_A1462 NC_012695.1 1406710 1408089 R putative lipoprotein complement(1406710..1408089) Burkholderia pseudomallei MSHR346 7890243 YP_002896176.1 CDS GBP346_A1463 NC_012695.1 1408094 1408516 R hypothetical protein complement(1408094..1408516) Burkholderia pseudomallei MSHR346 7888899 YP_002896177.1 CDS GBP346_A1464 NC_012695.1 1408544 1408951 R identified by match to protein family HMM PF06073; hypothetical protein complement(1408544..1408951) Burkholderia pseudomallei MSHR346 7889466 YP_002896178.1 CDS GBP346_A1465 NC_012695.1 1408948 1410849 R identified by match to protein family HMM PF01077; match to protein family HMM PF03460; nitrite and sulphite reductase 4Fe-4S domain protein complement(1408948..1410849) Burkholderia pseudomallei MSHR346 7890555 YP_002896179.1 CDS GBP346_A1466 NC_012695.1 1410843 1411019 R identified by glimmer; putative; hypothetical protein complement(1410843..1411019) Burkholderia pseudomallei MSHR346 7888991 YP_002896180.1 CDS GBP346_A1467 NC_012695.1 1411315 1411488 D hypothetical protein 1411315..1411488 Burkholderia pseudomallei MSHR346 7886946 YP_002896181.1 CDS GBP346_A1468 NC_012695.1 1411565 1413040 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; aminotransferase, classes I and II superfamily complement(1411565..1413040) Burkholderia pseudomallei MSHR346 7890707 YP_002896182.1 CDS GBP346_A1469 NC_012695.1 1413158 1413415 R hypothetical protein complement(1413158..1413415) Burkholderia pseudomallei MSHR346 7888581 YP_002896183.1 CDS GBP346_A1470 NC_012695.1 1413453 1413731 R hypothetical protein complement(1413453..1413731) Burkholderia pseudomallei MSHR346 7887549 YP_002896184.1 CDS GBP346_A1471 NC_012695.1 1413728 1414129 R identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family complement(1413728..1414129) Burkholderia pseudomallei MSHR346 7889660 YP_002896185.1 CDS GBP346_A1472 NC_012695.1 1414161 1414598 R identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family complement(1414161..1414598) Burkholderia pseudomallei MSHR346 7887787 YP_002896186.1 CDS GBP346_A1473 NC_012695.1 1414762 1415421 R hypothetical protein complement(1414762..1415421) Burkholderia pseudomallei MSHR346 7886757 YP_002896187.1 CDS GBP346_A1474 NC_012695.1 1415405 1415617 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1415405..1415617 Burkholderia pseudomallei MSHR346 7888556 YP_002896188.1 CDS GBP346_A1475 NC_012695.1 1415652 1415870 D identified by glimmer; putative; hypothetical protein 1415652..1415870 Burkholderia pseudomallei MSHR346 7888196 YP_002896189.1 CDS GBP346_A1476 NC_012695.1 1415830 1416042 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1415830..1416042 Burkholderia pseudomallei MSHR346 7886960 YP_002896190.1 CDS GBP346_A1477 NC_012695.1 1416092 1416229 R hypothetical protein complement(1416092..1416229) Burkholderia pseudomallei MSHR346 7889067 YP_002896191.1 CDS GBP346_A1478 NC_012695.1 1416282 1418132 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1416282..1418132 Burkholderia pseudomallei MSHR346 7888993 YP_002896192.1 CDS GBP346_A1479 NC_012695.1 1418227 1419345 D identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase NAD binding domain/C- domain protein 1418227..1419345 Burkholderia pseudomallei MSHR346 7886752 YP_002896193.1 CDS GBP346_A1480 NC_012695.1 1419469 1419729 R hypothetical protein complement(1419469..1419729) Burkholderia pseudomallei MSHR346 7888541 YP_002896194.1 CDS GBP346_A1481 NC_012695.1 1419916 1420776 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(1419916..1420776) Burkholderia pseudomallei MSHR346 7889089 YP_002896195.1 CDS madL NC_012695.1 1421035 1421430 D identified by match to protein family HMM PF03817; match to protein family HMM TIGR00807; malonate transporter, MadL subunit 1421035..1421430 Burkholderia pseudomallei MSHR346 7889597 YP_002896196.1 CDS madM NC_012695.1 1421444 1422211 D identified by match to protein family HMM PF03818; match to protein family HMM TIGR00808; malonate transporter, MadM subunit 1421444..1422211 Burkholderia pseudomallei MSHR346 7888759 YP_002896197.1 CDS GBP346_A1484 NC_012695.1 1422232 1422516 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1422232..1422516 Burkholderia pseudomallei MSHR346 7887417 YP_002896198.1 CDS mdcA NC_012695.1 1422513 1424159 D identified by match to protein family HMM TIGR01110; malonate decarboxylase, alpha subunit 1422513..1424159 Burkholderia pseudomallei MSHR346 7887659 YP_002896199.1 CDS mdcC NC_012695.1 1424173 1424490 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 1424173..1424490 Burkholderia pseudomallei MSHR346 7887498 YP_002896200.1 CDS mdcD NC_012695.1 1424487 1425434 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1424487..1425434 Burkholderia pseudomallei MSHR346 7889487 YP_002896201.1 CDS mdcE NC_012695.1 1425421 1426146 D identified by match to protein family HMM PF06833; match to protein family HMM TIGR03134; malonate decarboxylase, gamma subunit 1425421..1426146 Burkholderia pseudomallei MSHR346 7887911 YP_002896202.1 CDS mdcG NC_012695.1 1426121 1427047 D catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1426121..1427047 Burkholderia pseudomallei MSHR346 7889721 YP_002896203.1 CDS GBP346_A1490 NC_012695.1 1427044 1428405 D identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132; triphosphoribosyl-dephospho-CoA synthase 1427044..1428405 Burkholderia pseudomallei MSHR346 7890331 YP_002896204.1 CDS mdcH NC_012695.1 1428402 1429340 D identified by match to protein family HMM TIGR03131; malonate decarboxylase, epsilon subunit 1428402..1429340 Burkholderia pseudomallei MSHR346 7887352 YP_002896205.1 CDS GBP346_A1492 NC_012695.1 1429374 1429979 D hypothetical protein 1429374..1429979 Burkholderia pseudomallei MSHR346 7888085 YP_002896206.1 CDS GBP346_A1493 NC_012695.1 1430499 1431380 D hypothetical protein 1430499..1431380 Burkholderia pseudomallei MSHR346 7887034 YP_002896207.1 CDS GBP346_A1494 NC_012695.1 1431800 1432429 D identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 1431800..1432429 Burkholderia pseudomallei MSHR346 7889604 YP_002896208.1 CDS GBP346_A1496 NC_012695.1 1432746 1432964 D hypothetical protein 1432746..1432964 Burkholderia pseudomallei MSHR346 7887424 YP_002896209.1 CDS GBP346_A1495 NC_012695.1 1432934 1434421 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter complement(1432934..1434421) Burkholderia pseudomallei MSHR346 7890605 YP_002896210.1 CDS GBP346_A1497 NC_012695.1 1434669 1434791 D hypothetical protein 1434669..1434791 Burkholderia pseudomallei MSHR346 7888761 YP_002896211.1 CDS GBP346_A1498 NC_012695.1 1434869 1435288 D identified by match to protein family HMM PF02694; hypothetical protein 1434869..1435288 Burkholderia pseudomallei MSHR346 7888354 YP_002896212.1 CDS dnaQ NC_012695.1 1435678 1436439 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(1435678..1436439) Burkholderia pseudomallei MSHR346 7887194 YP_002896213.1 CDS rnhA NC_012695.1 1436458 1436904 R identified by match to protein family HMM PF00075; ribonuclease HI complement(1436458..1436904) Burkholderia pseudomallei MSHR346 7888064 YP_002896214.1 CDS GBP346_A1501 NC_012695.1 1436901 1437767 R identified by match to protein family HMM PF08241; methyltransferase type 11 complement(1436901..1437767) Burkholderia pseudomallei MSHR346 7888916 YP_002896215.1 CDS gloB NC_012695.1 1437734 1438540 D identified by match to protein family HMM PF00753; match to protein family HMM TIGR03413; hydroxyacylglutathione hydrolase 1437734..1438540 Burkholderia pseudomallei MSHR346 7889831 YP_002896216.1 CDS GBP346_A1503 NC_012695.1 1438717 1440285 D identified by match to protein family HMM PF01464; match to protein family HMM PF01476; match to protein family HMM PF06474; lytic transglycosylase catalytic 1438717..1440285 Burkholderia pseudomallei MSHR346 7887783 YP_002896217.1 CDS GBP346_A1504 NC_012695.1 1440420 1441658 D identified by match to protein family HMM PF07690; major facilitator family transporter 1440420..1441658 Burkholderia pseudomallei MSHR346 7889666 YP_002896218.1 CDS GBP346_A1505 NC_012695.1 1441765 1442907 R hypothetical protein complement(1441765..1442907) Burkholderia pseudomallei MSHR346 7886773 YP_002896219.1 CDS GBP346_A1506 NC_012695.1 1442920 1443054 D identified by glimmer; putative; hypothetical protein 1442920..1443054 Burkholderia pseudomallei MSHR346 7889090 YP_002896220.1 CDS GBP346_A1507 NC_012695.1 1443102 1444157 D identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1443102..1444157 Burkholderia pseudomallei MSHR346 7890135 YP_002896221.1 CDS GBP346_A1508 NC_012695.1 1444343 1444486 R hypothetical protein complement(1444343..1444486) Burkholderia pseudomallei MSHR346 7888319 YP_002896222.1 CDS carA NC_012695.1 1444552 1445697 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1444552..1445697 Burkholderia pseudomallei MSHR346 7890934 YP_002896223.1 CDS GBP346_A1510 NC_012695.1 1445729 1446391 D identified by match to protein family HMM PF01810; leucine export protein LeuE 1445729..1446391 Burkholderia pseudomallei MSHR346 7888672 YP_002896224.1 CDS carB NC_012695.1 1446443 1449697 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1446443..1449697 Burkholderia pseudomallei MSHR346 7887561 YP_002896225.1 CDS greA NC_012695.1 1449816 1450292 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1449816..1450292 Burkholderia pseudomallei MSHR346 7888790 YP_002896226.1 CDS GBP346_A1513 NC_012695.1 1450292 1450795 D hypothetical protein 1450292..1450795 Burkholderia pseudomallei MSHR346 7889860 YP_002896227.1 CDS GBP346_A1514 NC_012695.1 1450866 1451420 R identified by match to protein family HMM PF01985; CRS1 complement(1450866..1451420) Burkholderia pseudomallei MSHR346 7887153 YP_002896228.1 CDS GBP346_A1515 NC_012695.1 1451439 1451591 R identified by glimmer; putative; hypothetical protein complement(1451439..1451591) Burkholderia pseudomallei MSHR346 7888109 YP_002896229.1 CDS rrmJ NC_012695.1 1451518 1452276 D identified by match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J 1451518..1452276 Burkholderia pseudomallei MSHR346 7887148 YP_002896230.1 CDS GBP346_A1517 NC_012695.1 1452444 1454330 D identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protease FtsH 1452444..1454330 Burkholderia pseudomallei MSHR346 7890270 YP_002896231.1 CDS folP NC_012695.1 1454443 1455333 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 1454443..1455333 Burkholderia pseudomallei MSHR346 7888046 YP_002896232.1 CDS glmM NC_012695.1 1455359 1456717 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1455359..1456717 Burkholderia pseudomallei MSHR346 7889007 YP_002896233.1 CDS pstS NC_012695.1 1457153 1458181 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter, phosphate-binding protein PstS 1457153..1458181 Burkholderia pseudomallei MSHR346 7887648 YP_002896234.1 CDS pstC NC_012695.1 1458336 1459274 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 1458336..1459274 Burkholderia pseudomallei MSHR346 7888712 YP_002896235.1 CDS pstA NC_012695.1 1459271 1460164 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1459271..1460164 Burkholderia pseudomallei MSHR346 7889410 YP_002896236.1 CDS pstB NC_012695.1 1460180 1461028 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1460180..1461028 Burkholderia pseudomallei MSHR346 7888849 YP_002896237.1 CDS phoU NC_012695.1 1461048 1461752 D identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 1461048..1461752 Burkholderia pseudomallei MSHR346 7890208 YP_002896238.1 CDS phoB NC_012695.1 1461781 1462482 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154; phosphate regulon transcriptional regulatory protein PhoB 1461781..1462482 Burkholderia pseudomallei MSHR346 7887389 YP_002896239.1 CDS phoR NC_012695.1 1462552 1463862 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR02966; phosphate regulon sensor kinase PhoR 1462552..1463862 Burkholderia pseudomallei MSHR346 7889460 YP_002896240.1 CDS ppk NC_012695.1 1464063 1466123 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1464063..1466123) Burkholderia pseudomallei MSHR346 7888793 YP_002896241.1 CDS GBP346_A1528 NC_012695.1 1466399 1467913 D identified by match to protein family HMM PF02541; exopolyphosphatase 1466399..1467913 Burkholderia pseudomallei MSHR346 7890879 YP_002896242.1 CDS GBP346_A1529 NC_012695.1 1468226 1468669 R hypothetical protein complement(1468226..1468669) Burkholderia pseudomallei MSHR346 7888272 YP_002896243.1 CDS GBP346_A1530 NC_012695.1 1469170 1470243 D PAP2 family protein 1469170..1470243 Burkholderia pseudomallei MSHR346 7886750 YP_002896244.1 CDS GBP346_A1531 NC_012695.1 1470365 1470934 D hypothetical protein 1470365..1470934 Burkholderia pseudomallei MSHR346 7888451 YP_002896245.1 CDS GBP346_A1532 NC_012695.1 1471111 1471248 R identified by glimmer; putative; hypothetical protein complement(1471111..1471248) Burkholderia pseudomallei MSHR346 7887489 YP_002896246.1 CDS GBP346_A1533 NC_012695.1 1471355 1471612 R hypothetical protein complement(1471355..1471612) Burkholderia pseudomallei MSHR346 7888772 YP_002896247.1 CDS GBP346_A1534 NC_012695.1 1471656 1471967 D identified by glimmer; putative; hypothetical protein 1471656..1471967 Burkholderia pseudomallei MSHR346 7886740 YP_002896248.1 CDS GBP346_A1535 NC_012695.1 1472286 1472546 R hypothetical protein complement(1472286..1472546) Burkholderia pseudomallei MSHR346 7889580 YP_002896249.1 CDS GBP346_A1536 NC_012695.1 1472543 1473025 R hypothetical protein complement(1472543..1473025) Burkholderia pseudomallei MSHR346 7887839 YP_002896250.1 CDS GBP346_A1538 NC_012695.1 1473515 1473976 D identified by similarity to SP:P76502; match to protein family HMM PF00300; match to protein family HMM TIGR00249; phosphohistidine phosphatase SixA 1473515..1473976 Burkholderia pseudomallei MSHR346 7889190 YP_002896251.1 CDS GBP346_A1539 NC_012695.1 1474128 1474946 D hypothetical protein 1474128..1474946 Burkholderia pseudomallei MSHR346 7890306 YP_002896252.1 CDS GBP346_A1540 NC_012695.1 1475111 1475242 R hypothetical protein complement(1475111..1475242) Burkholderia pseudomallei MSHR346 7887119 YP_002896253.1 CDS GBP346_A1541 NC_012695.1 1475306 1475476 R hypothetical protein complement(1475306..1475476) Burkholderia pseudomallei MSHR346 7887900 YP_002896254.1 CDS GBP346_A1542 NC_012695.1 1475644 1475835 D putative lipoprotein 1475644..1475835 Burkholderia pseudomallei MSHR346 7889403 YP_002896255.1 CDS GBP346_A1543 NC_012695.1 1476088 1477404 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; DNA-damage-inducible protein F complement(1476088..1477404) Burkholderia pseudomallei MSHR346 7887627 YP_002896256.1 CDS GBP346_A1544 NC_012695.1 1477487 1477804 R hypothetical protein complement(1477487..1477804) Burkholderia pseudomallei MSHR346 7887207 YP_002896257.1 CDS GBP346_A1545 NC_012695.1 1478102 1479727 R identified by match to protein family HMM PF00501; acetyl-coenzyme A synthetase complement(1478102..1479727) Burkholderia pseudomallei MSHR346 7888467 YP_002896258.1 CDS GBP346_A1546 NC_012695.1 1479707 1479820 D hypothetical protein 1479707..1479820 Burkholderia pseudomallei MSHR346 7887181 YP_002896259.1 CDS GBP346_A1547 NC_012695.1 1479886 1480005 D hypothetical protein 1479886..1480005 Burkholderia pseudomallei MSHR346 7887699 YP_002896260.1 CDS GBP346_A1548 NC_012695.1 1480083 1480784 R identified by match to protein family HMM PF01476; match to protein family HMM PF01551; LysM domain/M23 peptidase domain protein complement(1480083..1480784) Burkholderia pseudomallei MSHR346 7887430 YP_002896261.1 CDS GBP346_A1549 NC_012695.1 1481081 1481989 R identified by match to protein family HMM PF01263; aldose 1-epimerase subfamily complement(1481081..1481989) Burkholderia pseudomallei MSHR346 7889520 YP_002896262.1 CDS GBP346_A1550 NC_012695.1 1482537 1483367 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1482537..1483367 Burkholderia pseudomallei MSHR346 7888834 YP_002896263.1 CDS GBP346_A1552 NC_012695.1 1485024 1485146 D hypothetical protein 1485024..1485146 Burkholderia pseudomallei MSHR346 7889182 YP_002896264.1 CDS GBP346_A1553 NC_012695.1 1485323 1485451 R hypothetical protein complement(1485323..1485451) Burkholderia pseudomallei MSHR346 7890359 YP_002896265.1 CDS GBP346_A1554 NC_012695.1 1486962 1489736 D identified by match to protein family HMM PF09718; putative phage HK97 tail length tape measure-related protein 1486962..1489736 Burkholderia pseudomallei MSHR346 7887937 YP_002896266.1 CDS GBP346_A1555 NC_012695.1 1489822 1491399 D identified by match to protein family HMM PF04586; putative prohead protease 1489822..1491399 Burkholderia pseudomallei MSHR346 7887043 YP_002896267.1 CDS GBP346_A1556 NC_012695.1 1492866 1493102 D identified by glimmer; putative; hypothetical protein 1492866..1493102 Burkholderia pseudomallei MSHR346 7889929 YP_002896268.1 CDS GBP346_A1557 NC_012695.1 1494629 1494919 D identified by glimmer; putative; hypothetical protein 1494629..1494919 Burkholderia pseudomallei MSHR346 7890182 YP_002896269.1 CDS GBP346_A1558 NC_012695.1 1495180 1495929 D identified by glimmer; putative; hypothetical protein 1495180..1495929 Burkholderia pseudomallei MSHR346 7888553 YP_002896270.1 CDS GBP346_A1559 NC_012695.1 1495975 1498020 R putative transposon gamma-delta 80.3 kDa protein (Transposon rotein TnpX) complement(1495975..1498020) Burkholderia pseudomallei MSHR346 7887575 YP_002896271.1 CDS GBP346_A1560 NC_012695.1 1499255 1499431 D DNA-binding protein, CopG family 1499255..1499431 Burkholderia pseudomallei MSHR346 7888647 YP_002896272.1 CDS GBP346_A1561 NC_012695.1 1499782 1499901 R identified by glimmer; putative; hypothetical protein complement(1499782..1499901) Burkholderia pseudomallei MSHR346 7889748 YP_002896273.1 CDS GBP346_A1563 NC_012695.1 1500368 1501159 D hypothetical protein 1500368..1501159 Burkholderia pseudomallei MSHR346 7889395 YP_002896274.1 CDS GBP346_A1562 NC_012695.1 1501156 1502175 R identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family complement(1501156..1502175) Burkholderia pseudomallei MSHR346 7886980 YP_002896275.1 CDS GBP346_A1564 NC_012695.1 1502334 1502579 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family complement(1502334..1502579) Burkholderia pseudomallei MSHR346 7888970 YP_002896276.1 CDS GBP346_A1565 NC_012695.1 1502727 1502933 D hypothetical protein 1502727..1502933 Burkholderia pseudomallei MSHR346 7888256 YP_002896277.1 CDS GBP346_A1566 NC_012695.1 1502954 1503667 R hypothetical protein complement(1502954..1503667) Burkholderia pseudomallei MSHR346 7886882 YP_002896278.1 CDS GBP346_A1567 NC_012695.1 1503676 1504197 R hypothetical protein complement(1503676..1504197) Burkholderia pseudomallei MSHR346 7887832 YP_002896279.1 CDS GBP346_A1568 NC_012695.1 1504154 1504603 R hypothetical protein complement(1504154..1504603) Burkholderia pseudomallei MSHR346 7888116 YP_002896280.1 CDS GBP346_A1569 NC_012695.1 1504620 1505126 R hypothetical protein complement(1504620..1505126) Burkholderia pseudomallei MSHR346 7886774 YP_002896281.1 CDS GBP346_A1570 NC_012695.1 1505123 1505545 R identified by match to protein family HMM PF05488; PAAR motif protein complement(1505123..1505545) Burkholderia pseudomallei MSHR346 7888766 YP_002896282.1 CDS GBP346_A1571 NC_012695.1 1506049 1506333 D hypothetical protein 1506049..1506333 Burkholderia pseudomallei MSHR346 7889411 YP_002896283.1 CDS GBP346_A1572 NC_012695.1 1506369 1508183 D identified by match to protein family HMM PF02409; match to protein family HMM PF05583; match to protein family HMM PF09278; match to protein family HMM TIGR00027; transcriptional regulator, MerR family 1506369..1508183 Burkholderia pseudomallei MSHR346 7888243 YP_002896284.1 CDS GBP346_A1573 NC_012695.1 1508250 1509710 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family complement(1508250..1509710) Burkholderia pseudomallei MSHR346 7888611 YP_002896285.1 CDS GBP346_A1574 NC_012695.1 1509728 1509901 R hypothetical protein complement(1509728..1509901) Burkholderia pseudomallei MSHR346 7888971 YP_002896286.1 CDS GBP346_A1575 NC_012695.1 1509933 1510310 D hypothetical protein 1509933..1510310 Burkholderia pseudomallei MSHR346 7889650 YP_002896287.1 CDS GBP346_A1576 NC_012695.1 1510334 1510555 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1510334..1510555 Burkholderia pseudomallei MSHR346 7886999 YP_002896288.1 CDS GBP346_A1577 NC_012695.1 1510583 1510975 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; tryptophan repressor binding protein 1510583..1510975 Burkholderia pseudomallei MSHR346 7888928 YP_002896289.1 CDS treY NC_012695.1 1511208 1514000 R identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase complement(1511208..1514000) Burkholderia pseudomallei MSHR346 7888594 YP_002896290.1 CDS malQ NC_012695.1 1513997 1516201 R identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase complement(1513997..1516201) Burkholderia pseudomallei MSHR346 7886823 YP_002896291.1 CDS treZ NC_012695.1 1516198 1518102 R identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase complement(1516198..1518102) Burkholderia pseudomallei MSHR346 7889636 YP_002896292.1 CDS glgX NC_012695.1 1518129 1520237 R identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching enzyme GlgX complement(1518129..1520237) Burkholderia pseudomallei MSHR346 7886700 YP_002896293.1 CDS glgB NC_012695.1 1520290 1522506 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme complement(1520290..1522506) Burkholderia pseudomallei MSHR346 7888960 YP_002896294.1 CDS GBP346_A1583 NC_012695.1 1522503 1525898 R identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457; two domain protein: Trehalose synthase complement(1522503..1525898) Burkholderia pseudomallei MSHR346 7890079 YP_002896295.1 CDS GBP346_A1584 NC_012695.1 1525895 1529242 R identified by match to protein family HMM PF00128; alpha amylase family protein complement(1525895..1529242) Burkholderia pseudomallei MSHR346 7888198 YP_002896296.1 CDS GBP346_A1585 NC_012695.1 1529237 1529407 D hypothetical protein 1529237..1529407 Burkholderia pseudomallei MSHR346 7887296 YP_002896297.1 CDS GBP346_A1586 NC_012695.1 1529411 1529665 R hypothetical protein complement(1529411..1529665) Burkholderia pseudomallei MSHR346 7888704 YP_002896298.1 CDS GBP346_A1588 NC_012695.1 1529666 1529815 D hypothetical protein 1529666..1529815 Burkholderia pseudomallei MSHR346 7889106 YP_002896299.1 CDS GBP346_A1587 NC_012695.1 1529796 1531274 R identified by match to protein family HMM PF00041; match to protein family HMM TIGR01840; poly(3-hydroxybutyrate) depolymerase (PHBdepolymerase) complement(1529796..1531274) Burkholderia pseudomallei MSHR346 7889435 YP_002896300.1 CDS GBP346_A1589 NC_012695.1 1531442 1531780 R hypothetical protein complement(1531442..1531780) Burkholderia pseudomallei MSHR346 7887802 YP_002896301.1 CDS GBP346_A1590 NC_012695.1 1531983 1532201 R hypothetical protein complement(1531983..1532201) Burkholderia pseudomallei MSHR346 7889998 YP_002896302.1 CDS GBP346_A1591 NC_012695.1 1532443 1532598 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1532443..1532598 Burkholderia pseudomallei MSHR346 7888375 YP_002896303.1 CDS GBP346_A1592 NC_012695.1 1532689 1533129 R hypothetical protein complement(1532689..1533129) Burkholderia pseudomallei MSHR346 7887451 YP_002896304.1 CDS GBP346_A1593 NC_012695.1 1533147 1533461 D hypothetical protein 1533147..1533461 Burkholderia pseudomallei MSHR346 7890497 YP_002896305.1 CDS GBP346_A1594 NC_012695.1 1533631 1535169 D hypothetical protein 1533631..1535169 Burkholderia pseudomallei MSHR346 7889696 YP_002896306.1 CDS GBP346_A1595 NC_012695.1 1535253 1535411 D identified by glimmer; putative; hypothetical protein 1535253..1535411 Burkholderia pseudomallei MSHR346 7888945 YP_002896307.1 CDS GBP346_A1596 NC_012695.1 1535436 1536413 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1535436..1536413 Burkholderia pseudomallei MSHR346 7889382 YP_002896308.1 CDS GBP346_A1597 NC_012695.1 1536869 1537654 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1536869..1537654 Burkholderia pseudomallei MSHR346 7888836 YP_002896309.1 CDS GBP346_A1598 NC_012695.1 1537696 1537818 D hypothetical protein 1537696..1537818 Burkholderia pseudomallei MSHR346 7888431 YP_002896310.1 CDS GBP346_A1599 NC_012695.1 1537833 1538048 D hypothetical protein 1537833..1538048 Burkholderia pseudomallei MSHR346 7887518 YP_002896311.1 CDS GBP346_A1600 NC_012695.1 1538080 1538430 D identified by match to protein family HMM PF05666; fels-1 prophage domain protein 1538080..1538430 Burkholderia pseudomallei MSHR346 7887830 YP_002896312.1 CDS GBP346_A1601 NC_012695.1 1538482 1538817 R hypothetical protein complement(1538482..1538817) Burkholderia pseudomallei MSHR346 7889912 YP_002896313.1 CDS GBP346_A1602 NC_012695.1 1538865 1539056 D hypothetical protein 1538865..1539056 Burkholderia pseudomallei MSHR346 7890795 YP_002896314.1 CDS GBP346_A1603 NC_012695.1 1539423 1540118 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1539423..1540118 Burkholderia pseudomallei MSHR346 7887330 YP_002896315.1 CDS GBP346_A1604 NC_012695.1 1540219 1540350 D hypothetical protein 1540219..1540350 Burkholderia pseudomallei MSHR346 7888708 YP_002896316.1 CDS GBP346_A1605 NC_012695.1 1540386 1543754 D identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; hemagluttinin family protein 1540386..1543754 Burkholderia pseudomallei MSHR346 7889862 YP_002896317.1 CDS GBP346_A1606 NC_012695.1 1543835 1544545 D identified by match to protein family HMM PF00691; outer membrane protein, OmpA family 1543835..1544545 Burkholderia pseudomallei MSHR346 7888220 YP_002896318.1 CDS GBP346_A1607 NC_012695.1 1544547 1546076 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain protein 1544547..1546076 Burkholderia pseudomallei MSHR346 7888370 YP_002896319.1 CDS GBP346_A1608 NC_012695.1 1546093 1546437 D identified by match to protein family HMM PF00816; H-NS histone family protein 1546093..1546437 Burkholderia pseudomallei MSHR346 7888066 YP_002896320.1 CDS GBP346_A1609 NC_012695.1 1546896 1547129 R hypothetical protein complement(1546896..1547129) Burkholderia pseudomallei MSHR346 7889097 YP_002896321.1 CDS GBP346_A1610 NC_012695.1 1547175 1547735 R hypothetical protein complement(1547175..1547735) Burkholderia pseudomallei MSHR346 7890183 YP_002896322.1 CDS GBP346_A1611 NC_012695.1 1547770 1548267 R hypothetical protein complement(1547770..1548267) Burkholderia pseudomallei MSHR346 7887351 YP_002896323.1 CDS GBP346_A1612 NC_012695.1 1548294 1550870 R identified by match to protein family HMM PF00652; match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; lectin repeat domain protein complement(1548294..1550870) Burkholderia pseudomallei MSHR346 7889670 YP_002896324.1 CDS GBP346_A1613 NC_012695.1 1550949 1551182 R hypothetical protein complement(1550949..1551182) Burkholderia pseudomallei MSHR346 7887790 YP_002896325.1 CDS GBP346_A1614 NC_012695.1 1551227 1552063 D esterase 1551227..1552063 Burkholderia pseudomallei MSHR346 7887376 YP_002896326.1 CDS GBP346_A1615 NC_012695.1 1552221 1553225 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; outer membrane efflux protein complement(1552221..1553225) Burkholderia pseudomallei MSHR346 7890847 YP_002896327.1 CDS vasA_2 NC_012695.1 1553285 1555186 D identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family 1553285..1555186 Burkholderia pseudomallei MSHR346 7887982 YP_002896328.1 CDS GBP346_A1617 NC_012695.1 1555211 1556626 R hypothetical protein complement(1555211..1556626) Burkholderia pseudomallei MSHR346 7888850 YP_002896329.1 CDS GBP346_A1618 NC_012695.1 1556650 1556916 R PAAR motif protein complement(1556650..1556916) Burkholderia pseudomallei MSHR346 7890492 YP_002896330.1 CDS GBP346_A1619 NC_012695.1 1557176 1557319 R hypothetical protein complement(1557176..1557319) Burkholderia pseudomallei MSHR346 7887462 YP_002896331.1 CDS GBP346_A1620 NC_012695.1 1557305 1557421 D hypothetical protein 1557305..1557421 Burkholderia pseudomallei MSHR346 7887007 YP_002896332.1 CDS GBP346_A1621 NC_012695.1 1557437 1560244 D identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1557437..1560244 Burkholderia pseudomallei MSHR346 7887754 YP_002896333.1 CDS GBP346_A1622 NC_012695.1 1560247 1561080 D hypothetical protein 1560247..1561080 Burkholderia pseudomallei MSHR346 7886727 YP_002896334.1 CDS GBP346_A1623 NC_012695.1 1561217 1561774 D hypothetical protein 1561217..1561774 Burkholderia pseudomallei MSHR346 7888530 YP_002896335.1 CDS GBP346_A1624 NC_012695.1 1561802 1561963 R hypothetical protein complement(1561802..1561963) Burkholderia pseudomallei MSHR346 7887234 YP_002896336.1 CDS GBP346_A1625 NC_012695.1 1562361 1564769 D hypothetical protein 1562361..1564769 Burkholderia pseudomallei MSHR346 7889647 YP_002896337.1 CDS GBP346_A1626 NC_012695.1 1564878 1568213 D identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1564878..1568213 Burkholderia pseudomallei MSHR346 7889121 YP_002896338.1 CDS GBP346_A1627 NC_012695.1 1569121 1569546 D hypothetical protein 1569121..1569546 Burkholderia pseudomallei MSHR346 7889307 YP_002896339.1 CDS GBP346_A1628 NC_012695.1 1569685 1569798 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1569685..1569798 Burkholderia pseudomallei MSHR346 7888856 YP_002896340.1 CDS GBP346_A1629 NC_012695.1 1569758 1570021 D hypothetical protein 1569758..1570021 Burkholderia pseudomallei MSHR346 7889733 YP_002896341.1 CDS GBP346_A1630 NC_012695.1 1570039 1570344 D hypothetical protein 1570039..1570344 Burkholderia pseudomallei MSHR346 7889018 YP_002896342.1 CDS GBP346_A1631 NC_012695.1 1570357 1573191 D identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1570357..1573191 Burkholderia pseudomallei MSHR346 7887606 YP_002896343.1 CDS GBP346_A1632 NC_012695.1 1573195 1574211 D hypothetical protein 1573195..1574211 Burkholderia pseudomallei MSHR346 7889317 YP_002896344.1 CDS GBP346_A1633 NC_012695.1 1574214 1577237 D hypothetical protein 1574214..1577237 Burkholderia pseudomallei MSHR346 7889024 YP_002896345.1 CDS GBP346_A1634 NC_012695.1 1577471 1577659 R hypothetical protein complement(1577471..1577659) Burkholderia pseudomallei MSHR346 7887129 YP_002896346.1 CDS GBP346_A1635 NC_012695.1 1578187 1578444 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1578187..1578444 Burkholderia pseudomallei MSHR346 7888983 YP_002896347.1 CDS GBP346_A1636 NC_012695.1 1579686 1579841 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1579686..1579841 Burkholderia pseudomallei MSHR346 7889399 YP_002896348.1 CDS GBP346_A1637 NC_012695.1 1580174 1580317 R transposase complement(1580174..1580317) Burkholderia pseudomallei MSHR346 7888175 YP_002896349.1 CDS GBP346_A1638 NC_012695.1 1580388 1580624 R identified by glimmer; putative; hypothetical protein complement(1580388..1580624) Burkholderia pseudomallei MSHR346 7888138 YP_002896350.1 CDS GBP346_A1639 NC_012695.1 1580667 1580816 D hypothetical protein 1580667..1580816 Burkholderia pseudomallei MSHR346 7887003 YP_002896351.1 CDS GBP346_A1640 NC_012695.1 1581098 1581337 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1581098..1581337 Burkholderia pseudomallei MSHR346 7889142 YP_002896352.1 CDS GBP346_A1641 NC_012695.1 1581406 1581549 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1581406..1581549 Burkholderia pseudomallei MSHR346 7888008 YP_002896353.1 CDS GBP346_A1642 NC_012695.1 1581699 1582271 D transposase 1581699..1582271 Burkholderia pseudomallei MSHR346 7890095 YP_002896354.1 CDS GBP346_A1643 NC_012695.1 1582241 1582498 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Rhs element Vgr protein 1582241..1582498 Burkholderia pseudomallei MSHR346 7890033 YP_002896355.1 CDS GBP346_A1644 NC_012695.1 1582666 1582791 R identified by glimmer; putative; hypothetical protein complement(1582666..1582791) Burkholderia pseudomallei MSHR346 7890641 YP_002896356.1 CDS GBP346_A1645 NC_012695.1 1583776 1584696 D hypothetical protein 1583776..1584696 Burkholderia pseudomallei MSHR346 7886833 YP_002896357.1 CDS GBP346_A1647 NC_012695.1 1584956 1586269 D identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transport protein MntH 1584956..1586269 Burkholderia pseudomallei MSHR346 7890075 YP_002896358.1 CDS GBP346_A1646 NC_012695.1 1586250 1586606 R hypothetical protein complement(1586250..1586606) Burkholderia pseudomallei MSHR346 7887753 YP_002896359.1 CDS GBP346_A1648 NC_012695.1 1586575 1586715 D identified by glimmer; putative; hypothetical protein 1586575..1586715 Burkholderia pseudomallei MSHR346 7890099 YP_002896360.1 CDS GBP346_A1649 NC_012695.1 1587164 1587433 D hypothetical protein 1587164..1587433 Burkholderia pseudomallei MSHR346 7887831 YP_002896361.1 CDS GBP346_A1650 NC_012695.1 1587686 1587967 R identified by match to protein family HMM PF00816; H-NS histone family protein complement(1587686..1587967) Burkholderia pseudomallei MSHR346 7887557 YP_002896362.1 CDS GBP346_A1651 NC_012695.1 1587967 1588161 R hypothetical protein complement(1587967..1588161) Burkholderia pseudomallei MSHR346 7889255 YP_002896363.1 CDS GBP346_A1652 NC_012695.1 1588435 1589418 R identified by match to protein family HMM PF04909; amidohydrolase family protein complement(1588435..1589418) Burkholderia pseudomallei MSHR346 7888743 YP_002896364.1 CDS GBP346_A1653 NC_012695.1 1589463 1590800 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; probable 4-methylmuconolactone transporter complement(1589463..1590800) Burkholderia pseudomallei MSHR346 7890608 YP_002896365.1 CDS GBP346_A1654 NC_012695.1 1591035 1591163 D hypothetical protein 1591035..1591163 Burkholderia pseudomallei MSHR346 7890162 YP_002896366.1 CDS GBP346_A1655 NC_012695.1 1591166 1592059 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1591166..1592059 Burkholderia pseudomallei MSHR346 7887037 YP_002896367.1 CDS GBP346_A1656 NC_012695.1 1592171 1592341 R hypothetical protein complement(1592171..1592341) Burkholderia pseudomallei MSHR346 7889035 YP_002896368.1 CDS GBP346_A1657 NC_012695.1 1592371 1592592 D hypothetical protein 1592371..1592592 Burkholderia pseudomallei MSHR346 7889720 YP_002896369.1 CDS GBP346_A1658 NC_012695.1 1592678 1592866 D hypothetical protein 1592678..1592866 Burkholderia pseudomallei MSHR346 7890686 YP_002896370.1 CDS GBP346_A1659 NC_012695.1 1592853 1593398 D identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1592853..1593398 Burkholderia pseudomallei MSHR346 7887182 YP_002896371.1 CDS GBP346_A1660 NC_012695.1 1593451 1594011 D identified by match to protein family HMM PF05229; type I pilus protein 1593451..1594011 Burkholderia pseudomallei MSHR346 7886829 YP_002896372.1 CDS GBP346_A1661 NC_012695.1 1594088 1594612 D identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1594088..1594612 Burkholderia pseudomallei MSHR346 7890575 YP_002896373.1 CDS GBP346_A1662 NC_012695.1 1594630 1595469 D fimbrial chaperone protein 1594630..1595469 Burkholderia pseudomallei MSHR346 7887071 YP_002896374.1 CDS GBP346_A1663 NC_012695.1 1595514 1597925 D identified by match to protein family HMM PF00577; fimbrial usher protein 1595514..1597925 Burkholderia pseudomallei MSHR346 7887906 YP_002896375.1 CDS GBP346_A1664 NC_012695.1 1597941 1598906 D identified by match to protein family HMM PF05229; type 1 pili protein CsuE 1597941..1598906 Burkholderia pseudomallei MSHR346 7889763 YP_002896376.1 CDS GBP346_A1665 NC_012695.1 1599317 1601398 D identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; response regulator/sensor histidine kinase 1599317..1601398 Burkholderia pseudomallei MSHR346 7886824 YP_002896377.1 CDS GBP346_A1666 NC_012695.1 1601399 1602031 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; DNA-binding response regulator 1601399..1602031 Burkholderia pseudomallei MSHR346 7890743 YP_002896378.1 CDS GBP346_A1667 NC_012695.1 1602335 1604035 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor complement(1602335..1604035) Burkholderia pseudomallei MSHR346 7888944 YP_002896379.1 CDS GBP346_A1668 NC_012695.1 1604037 1605656 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug:H+ antiporter-2 complement(1604037..1605656) Burkholderia pseudomallei MSHR346 7887403 YP_002896380.1 CDS GBP346_A1669 NC_012695.1 1605653 1605841 R hypothetical protein complement(1605653..1605841) Burkholderia pseudomallei MSHR346 7888628 YP_002896381.1 CDS GBP346_A1670 NC_012695.1 1605838 1607025 R identified by match to protein family HMM PF00529; HlyD family secretion protein complement(1605838..1607025) Burkholderia pseudomallei MSHR346 7888816 YP_002896382.1 CDS GBP346_A1671 NC_012695.1 1607265 1607585 R hypothetical protein complement(1607265..1607585) Burkholderia pseudomallei MSHR346 7890886 YP_002896383.1 CDS GBP346_A1672 NC_012695.1 1607649 1608842 R enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase complement(1607649..1608842) Burkholderia pseudomallei MSHR346 7888921 YP_002896384.1 CDS acpA_1 NC_012695.1 1609040 1610623 R identified by match to protein family HMM PF04185; match to protein family HMM TIGR03397; acid phosphatase AcpA complement(1609040..1610623) Burkholderia pseudomallei MSHR346 7886930 YP_002896385.1 CDS GBP346_A1674 NC_012695.1 1610857 1612272 D identified by match to protein family HMM PF03150; di-heme cytochrome c peroxidase family protein 1610857..1612272 Burkholderia pseudomallei MSHR346 7887106 YP_002896386.1 CDS GBP346_A1675 NC_012695.1 1612316 1613176 R hypothetical protein complement(1612316..1613176) Burkholderia pseudomallei MSHR346 7888631 YP_002896387.1 CDS GBP346_A1677 NC_012695.1 1613278 1615377 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; glycosyl hydrolase, family 3 1613278..1615377 Burkholderia pseudomallei MSHR346 7890110 YP_002896388.1 CDS GBP346_A1676 NC_012695.1 1615347 1615544 R hypothetical protein complement(1615347..1615544) Burkholderia pseudomallei MSHR346 7888142 YP_002896389.1 CDS GBP346_A1678 NC_012695.1 1615569 1615745 R hypothetical protein complement(1615569..1615745) Burkholderia pseudomallei MSHR346 7887716 YP_002896390.1 CDS GBP346_A1679 NC_012695.1 1615707 1616051 D hypothetical protein 1615707..1616051 Burkholderia pseudomallei MSHR346 7886915 YP_002896391.1 CDS GBP346_A1680 NC_012695.1 1616070 1616552 D identified by match to protein family HMM PF00293; hydrolase, nudix family 1616070..1616552 Burkholderia pseudomallei MSHR346 7890704 YP_002896392.1 CDS glnS NC_012695.1 1616896 1618902 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(1616896..1618902) Burkholderia pseudomallei MSHR346 7888878 YP_002896393.1 CDS GBP346_A1682 NC_012695.1 1618885 1619094 D putative lipoprotein 1618885..1619094 Burkholderia pseudomallei MSHR346 7889742 YP_002896394.1 CDS GBP346_A1683 NC_012695.1 1619423 1621048 R identified by match to protein family HMM PF02515; caib/baif family protein complement(1619423..1621048) Burkholderia pseudomallei MSHR346 7888027 YP_002896395.1 CDS alaS NC_012695.1 1621267 1623891 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1621267..1623891 Burkholderia pseudomallei MSHR346 7890917 YP_002896396.1 CDS GBP346_A1685 NC_012695.1 1624405 1625430 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(1624405..1625430) Burkholderia pseudomallei MSHR346 7888942 YP_002896397.1 CDS GBP346_A1686 NC_012695.1 1625493 1627256 D identified by match to protein family HMM PF06779; match to protein family HMM PF07690; permease, major facilitator superfamily 1625493..1627256 Burkholderia pseudomallei MSHR346 7889079 YP_002896398.1 CDS GBP346_A1687 NC_012695.1 1627588 1629144 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; peptidase s1, chymotrypsin:pdz/dhr/glgf 1627588..1629144 Burkholderia pseudomallei MSHR346 7888681 YP_002896399.1 CDS GBP346_A1688 NC_012695.1 1629361 1630038 R hypothetical protein complement(1629361..1630038) Burkholderia pseudomallei MSHR346 7886723 YP_002896400.1 CDS GBP346_A1689 NC_012695.1 1630252 1630881 D identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family 1630252..1630881 Burkholderia pseudomallei MSHR346 7888601 YP_002896401.1 CDS GBP346_A1690 NC_012695.1 1630981 1631316 R identified by match to protein family HMM PF01906; hypothetical protein complement(1630981..1631316) Burkholderia pseudomallei MSHR346 7886825 YP_002896402.1 CDS GBP346_A1691 NC_012695.1 1631533 1632681 D identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-containing family protein 1631533..1632681 Burkholderia pseudomallei MSHR346 7888119 YP_002896403.1 CDS GBP346_A1692 NC_012695.1 1632678 1633031 D hypothetical protein 1632678..1633031 Burkholderia pseudomallei MSHR346 7889355 YP_002896404.1 CDS GBP346_A1693 NC_012695.1 1632827 1633381 D identified by match to protein family HMM PF03061; thioesterase family protein 1632827..1633381 Burkholderia pseudomallei MSHR346 7889039 YP_002896405.1 CDS GBP346_A1694 NC_012695.1 1633386 1634321 D identified by match to protein family HMM PF02653; ABC transporter, permease protein 1633386..1634321 Burkholderia pseudomallei MSHR346 7887795 YP_002896406.1 CDS GBP346_A1695 NC_012695.1 1634350 1636635 D identified by match to protein family HMM PF00005; match to protein family HMM PF02653; ABC transporter, permease/ATP-binding protein 1634350..1636635 Burkholderia pseudomallei MSHR346 7889426 YP_002896407.1 CDS GBP346_A1696 NC_012695.1 1636632 1637336 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1636632..1637336 Burkholderia pseudomallei MSHR346 7887160 YP_002896408.1 CDS GBP346_A1697 NC_012695.1 1637453 1638256 R identified by match to protein family HMM PF06845; protein IolB complement(1637453..1638256) Burkholderia pseudomallei MSHR346 7889157 YP_002896409.1 CDS GBP346_A1698 NC_012695.1 1638256 1639176 R identified by match to protein family HMM PF01261; IolE protein complement(1638256..1639176) Burkholderia pseudomallei MSHR346 7888251 YP_002896410.1 CDS GBP346_A1699 NC_012695.1 1639173 1641158 R identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; IolD protein complement(1639173..1641158) Burkholderia pseudomallei MSHR346 7890005 YP_002896411.1 CDS GBP346_A1700 NC_012695.1 1641169 1643169 R identified by match to protein family HMM PF00294; IolC protein complement(1641169..1643169) Burkholderia pseudomallei MSHR346 7888657 YP_002896412.1 CDS GBP346_A1701 NC_012695.1 1643183 1643983 R identified by match to protein family HMM PF00005; ribose import ATP-binding protein RbsA 2 complement(1643183..1643983) Burkholderia pseudomallei MSHR346 7890109 YP_002896413.1 CDS GBP346_A1702 NC_012695.1 1643996 1645141 R identified by match to protein family HMM PF02653; ABC transporter, carbohydrate uptake transporter-2 complement(1643996..1645141) Burkholderia pseudomallei MSHR346 7889441 YP_002896414.1 CDS GBP346_A1703 NC_012695.1 1645242 1646291 R ABC transporter, carbohydrate uptake transporter-2 complement(1645242..1646291) Burkholderia pseudomallei MSHR346 7887227 YP_002896415.1 CDS GBP346_A1704 NC_012695.1 1646536 1647417 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; SIS domain protein 1646536..1647417 Burkholderia pseudomallei MSHR346 7888115 YP_002896416.1 CDS GBP346_A1705 NC_012695.1 1647410 1648429 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; inositol 2-dehydrogenase 1647410..1648429 Burkholderia pseudomallei MSHR346 7886895 YP_002896417.1 CDS GBP346_A1706 NC_012695.1 1648442 1649479 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; oxidoreductase 1648442..1649479 Burkholderia pseudomallei MSHR346 7888485 YP_002896418.1 CDS GBP346_A1707 NC_012695.1 1649644 1649874 D identified by match to protein family HMM PF01206; hypothetical protein 1649644..1649874 Burkholderia pseudomallei MSHR346 7887649 YP_002896419.1 CDS GBP346_A1708 NC_012695.1 1650150 1650536 D hypothetical protein 1650150..1650536 Burkholderia pseudomallei MSHR346 7887501 YP_002896420.1 CDS GBP346_A1709 NC_012695.1 1650840 1651568 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1650840..1651568 Burkholderia pseudomallei MSHR346 7887665 YP_002896421.1 CDS GBP346_A1710 NC_012695.1 1651583 1652929 D identified by match to protein family HMM PF01476; LysM domain protein 1651583..1652929 Burkholderia pseudomallei MSHR346 7888784 YP_002896422.1 CDS GBP346_A1711 NC_012695.1 1652940 1655333 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF05226; sensory domain-containing histidine kinase 1652940..1655333 Burkholderia pseudomallei MSHR346 7887096 YP_002896423.1 CDS GBP346_A1712 NC_012695.1 1655431 1656039 D hypothetical protein 1655431..1656039 Burkholderia pseudomallei MSHR346 7887383 YP_002896424.1 CDS galU_1 NC_012695.1 1656100 1656981 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(1656100..1656981) Burkholderia pseudomallei MSHR346 7887310 YP_002896425.1 CDS valS NC_012695.1 1657068 1659935 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1657068..1659935) Burkholderia pseudomallei MSHR346 7886874 YP_002896426.1 CDS GBP346_A1715 NC_012695.1 1660075 1662438 D identified by match to protein family HMM PF00580; DNA helicase II 1660075..1662438 Burkholderia pseudomallei MSHR346 7887604 YP_002896427.1 CDS mtnN NC_012695.1 1662435 1663223 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1662435..1663223 Burkholderia pseudomallei MSHR346 7888447 YP_002896428.1 CDS GBP346_A1717 NC_012695.1 1663657 1664910 R identified by match to protein family HMM PF07690; fosmidomycin resistance protein complement(1663657..1664910) Burkholderia pseudomallei MSHR346 7886690 YP_002896429.1 CDS GBP346_A1719 NC_012695.1 1664995 1666938 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1664995..1666938 Burkholderia pseudomallei MSHR346 7889638 YP_002896430.1 CDS GBP346_A1718 NC_012695.1 1666911 1667210 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1666911..1667210) Burkholderia pseudomallei MSHR346 7890078 YP_002896431.1 CDS GBP346_A1720 NC_012695.1 1667289 1668170 R identified by match to protein family HMM PF00529; putative fusaric acid resistance protein complement(1667289..1668170) Burkholderia pseudomallei MSHR346 7889936 YP_002896432.1 CDS GBP346_A1721 NC_012695.1 1668184 1668387 R identified by match to protein family HMM PF07869; hypothetical protein complement(1668184..1668387) Burkholderia pseudomallei MSHR346 7889368 YP_002896433.1 CDS GBP346_A1722 NC_012695.1 1668384 1670585 R identified by match to protein family HMM PF04632; fusaric acid resistance domain protein complement(1668384..1670585) Burkholderia pseudomallei MSHR346 7886985 YP_002896434.1 CDS GBP346_A1723 NC_012695.1 1670602 1672461 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, outer membrane lipoprotein, NodT family protein complement(1670602..1672461) Burkholderia pseudomallei MSHR346 7888597 YP_002896435.1 CDS GBP346_A1724 NC_012695.1 1672538 1673479 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1672538..1673479 Burkholderia pseudomallei MSHR346 7886707 YP_002896436.1 CDS GBP346_A1725 NC_012695.1 1673618 1673791 D hypothetical protein 1673618..1673791 Burkholderia pseudomallei MSHR346 7890196 YP_002896437.1 CDS GBP346_A1726 NC_012695.1 1673828 1674799 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(1673828..1674799) Burkholderia pseudomallei MSHR346 7887369 YP_002896438.1 CDS GBP346_A1727 NC_012695.1 1674831 1676252 R identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidoreductase, FAD-binding complement(1674831..1676252) Burkholderia pseudomallei MSHR346 7888616 YP_002896439.1 CDS GBP346_A1728 NC_012695.1 1676287 1676736 R hypothetical protein complement(1676287..1676736) Burkholderia pseudomallei MSHR346 7889036 YP_002896440.1 CDS wrbA NC_012695.1 1676733 1677341 R identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; NAD(P)H:quinone oxidoreductase, type IV complement(1676733..1677341) Burkholderia pseudomallei MSHR346 7888600 YP_002896441.1 CDS GBP346_A1730 NC_012695.1 1677447 1678760 D identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; ribonuclease BN 1677447..1678760 Burkholderia pseudomallei MSHR346 7888532 YP_002896442.1 CDS GBP346_A1731 NC_012695.1 1678950 1679270 R membrane protein complement(1678950..1679270) Burkholderia pseudomallei MSHR346 7889231 YP_002896443.1 CDS GBP346_A1732 NC_012695.1 1679355 1679474 R identified by glimmer; putative; hypothetical protein complement(1679355..1679474) Burkholderia pseudomallei MSHR346 7886772 YP_002896444.1 CDS GBP346_A1733 NC_012695.1 1679487 1679951 D identified by match to protein family HMM PF00571; CBS domain protein 1679487..1679951 Burkholderia pseudomallei MSHR346 7890559 YP_002896445.1 CDS GBP346_A1734 NC_012695.1 1680051 1681985 D identified by match to protein family HMM PF01553; match to protein family HMM PF07690; transporter, major facilitator family 1680051..1681985 Burkholderia pseudomallei MSHR346 7890486 YP_002896446.1 CDS aroC NC_012695.1 1682069 1683460 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1682069..1683460 Burkholderia pseudomallei MSHR346 7889726 YP_002896447.1 CDS GBP346_A1737 NC_012695.1 1683457 1683651 D hypothetical protein 1683457..1683651 Burkholderia pseudomallei MSHR346 7890325 YP_002896448.1 CDS GBP346_A1736 NC_012695.1 1683636 1685381 R identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF05187; electron-transferring-flavoprotein dehydrogenase complement(1683636..1685381) Burkholderia pseudomallei MSHR346 7887186 YP_002896449.1 CDS GBP346_A1738 NC_012695.1 1685490 1686269 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase 1685490..1686269 Burkholderia pseudomallei MSHR346 7890694 YP_002896450.1 CDS GBP346_A1739 NC_012695.1 1686314 1686745 D identified by match to protein family HMM PF03061; thioesterase family protein 1686314..1686745 Burkholderia pseudomallei MSHR346 7887670 YP_002896451.1 CDS GBP346_A1740 NC_012695.1 1687123 1688196 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1687123..1688196) Burkholderia pseudomallei MSHR346 7888694 YP_002896452.1 CDS GBP346_A1741 NC_012695.1 1688422 1688658 D hypothetical protein 1688422..1688658 Burkholderia pseudomallei MSHR346 7887338 YP_002896453.1 CDS GBP346_A1742 NC_012695.1 1688709 1689929 R identified by match to protein family HMM PF01610; transposase complement(1688709..1689929) Burkholderia pseudomallei MSHR346 7890469 YP_002896454.1 CDS GBP346_A1743 NC_012695.1 1690438 1691970 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; xylann 1,4-beta-xylosidase complement(1690438..1691970) Burkholderia pseudomallei MSHR346 7888783 YP_002896455.1 CDS GBP346_A1744 NC_012695.1 1692083 1692313 D identified by glimmer; putative; hypothetical protein 1692083..1692313 Burkholderia pseudomallei MSHR346 7887314 YP_002896456.1 CDS GBP346_A1745 NC_012695.1 1692542 1693087 R identified by match to protein family HMM PF00196; match to protein family HMM PF08448; transcriptional regulator, LuxR family complement(1692542..1693087) Burkholderia pseudomallei MSHR346 7887208 YP_002896457.1 CDS GBP346_A1746 NC_012695.1 1693340 1694044 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; 3-oxoacid CoA-transferase, A subunit family 1693340..1694044 Burkholderia pseudomallei MSHR346 7886798 YP_002896458.1 CDS GBP346_A1747 NC_012695.1 1694046 1694687 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; succinyl-coa:3-ketoacid-coenzyme a transferase subunit b (succinyl coa:3-oxoacid coa-transferase) (oxct b) 1694046..1694687 Burkholderia pseudomallei MSHR346 7890788 YP_002896459.1 CDS GBP346_A1748 NC_012695.1 1695104 1695826 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase complement(1695104..1695826) Burkholderia pseudomallei MSHR346 7890298 YP_002896460.1 CDS GBP346_A1749 NC_012695.1 1695870 1696970 R identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein complement(1695870..1696970) Burkholderia pseudomallei MSHR346 7890166 YP_002896461.1 CDS GBP346_A1750 NC_012695.1 1696985 1697542 R identified by match to protein family HMM PF07366; hypothetical protein complement(1696985..1697542) Burkholderia pseudomallei MSHR346 7889412 YP_002896462.1 CDS GBP346_A1751 NC_012695.1 1697634 1698635 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1697634..1698635 Burkholderia pseudomallei MSHR346 7887722 YP_002896463.1 CDS GBP346_A1752 NC_012695.1 1699626 1700867 D identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 1699626..1700867 Burkholderia pseudomallei MSHR346 7890803 YP_002896464.1 CDS GBP346_A1753 NC_012695.1 1700941 1701294 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP family 1700941..1701294 Burkholderia pseudomallei MSHR346 7888639 YP_002896465.1 CDS relA NC_012695.1 1701339 1703576 D identified by match to protein family HMM PF01842; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP diphosphokinase 1701339..1703576 Burkholderia pseudomallei MSHR346 7886754 YP_002896466.1 CDS GBP346_A1756 NC_012695.1 1703836 1703991 R identified by glimmer; putative; hypothetical protein complement(1703836..1703991) Burkholderia pseudomallei MSHR346 7889205 YP_002896467.1 CDS thrS NC_012695.1 1704007 1705914 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1704007..1705914 Burkholderia pseudomallei MSHR346 7890905 YP_002896468.1 CDS infC NC_012695.1 1706018 1706488 D identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 1706018..1706488 Burkholderia pseudomallei MSHR346 7889554 YP_002896469.1 CDS rpmI NC_012695.1 1706681 1706878 D identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 1706681..1706878 Burkholderia pseudomallei MSHR346 7888487 YP_002896470.1 CDS rplT NC_012695.1 1706909 1707268 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1706909..1707268 Burkholderia pseudomallei MSHR346 7890235 YP_002896471.1 CDS pheS NC_012695.1 1707399 1708430 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1707399..1708430 Burkholderia pseudomallei MSHR346 7888379 YP_002896472.1 CDS pheT NC_012695.1 1708518 1710950 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1708518..1710950 Burkholderia pseudomallei MSHR346 7888408 YP_002896473.1 CDS ihfA NC_012695.1 1711023 1711427 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1711023..1711427 Burkholderia pseudomallei MSHR346 7887949 YP_002896474.1 CDS GBP346_A1764 NC_012695.1 1711486 1711890 D identified by match to protein family HMM PF00376; transcriptional regulator, MerR family 1711486..1711890 Burkholderia pseudomallei MSHR346 7888236 YP_002896475.1 CDS GBP346_A1765 NC_012695.1 1712012 1714165 R identified by match to protein family HMM PF05665; hypothetical protein complement(1712012..1714165) Burkholderia pseudomallei MSHR346 7888107 YP_002896476.1 CDS GBP346_A1766 NC_012695.1 1714632 1715816 R identified by match to protein family HMM PF01757; acyltransferase complement(1714632..1715816) Burkholderia pseudomallei MSHR346 7889420 YP_002896477.1 CDS GBP346_A1768 NC_012695.1 1716525 1717727 R Gly/Ala/Ser-rich lipoprotein complement(1716525..1717727) Burkholderia pseudomallei MSHR346 7889201 YP_002896478.1 CDS GBP346_A1769 NC_012695.1 1717738 1718229 R hypothetical protein complement(1717738..1718229) Burkholderia pseudomallei MSHR346 7890004 YP_002896479.1 CDS GBP346_A1770 NC_012695.1 1718270 1718401 R hypothetical protein complement(1718270..1718401) Burkholderia pseudomallei MSHR346 7888575 YP_002896480.1 CDS GBP346_A1771 NC_012695.1 1718579 1719784 D NlpBDapX family lipoprotein 1718579..1719784 Burkholderia pseudomallei MSHR346 7888095 YP_002896481.1 CDS GBP346_A1772 NC_012695.1 1720348 1720638 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase family protein 1720348..1720638 Burkholderia pseudomallei MSHR346 7887133 YP_002896482.1 CDS GBP346_A1773 NC_012695.1 1720688 1720945 R hypothetical protein complement(1720688..1720945) Burkholderia pseudomallei MSHR346 7888188 YP_002896483.1 CDS GBP346_A1774 NC_012695.1 1721094 1721372 R hypothetical protein complement(1721094..1721372) Burkholderia pseudomallei MSHR346 7889861 YP_002896484.1 CDS GBP346_A1775 NC_012695.1 1721611 1722333 R identified by match to protein family HMM PF02698; hypothetical protein complement(1721611..1722333) Burkholderia pseudomallei MSHR346 7889334 YP_002896485.1 CDS GBP346_A1776 NC_012695.1 1722558 1722851 D hypothetical protein 1722558..1722851 Burkholderia pseudomallei MSHR346 7887611 YP_002896486.1 CDS GBP346_A1777 NC_012695.1 1723016 1723186 D identified by glimmer; putative; hypothetical protein 1723016..1723186 Burkholderia pseudomallei MSHR346 7887446 YP_002896487.1 CDS GBP346_A1778 NC_012695.1 1723473 1723871 R hypothetical protein complement(1723473..1723871) Burkholderia pseudomallei MSHR346 7888664 YP_002896488.1 CDS GBP346_A1779 NC_012695.1 1724293 1725195 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1724293..1725195 Burkholderia pseudomallei MSHR346 7889480 YP_002896489.1 CDS GBP346_A1780 NC_012695.1 1725614 1726981 D identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 1725614..1726981 Burkholderia pseudomallei MSHR346 7888800 YP_002896490.1 CDS GBP346_A1781 NC_012695.1 1727045 1728709 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 1727045..1728709 Burkholderia pseudomallei MSHR346 7888124 YP_002896491.1 CDS GBP346_A1782 NC_012695.1 1729014 1729475 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1729014..1729475 Burkholderia pseudomallei MSHR346 7887162 YP_002896492.1 CDS nusA NC_012695.1 1729472 1730947 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1729472..1730947 Burkholderia pseudomallei MSHR346 7889430 YP_002896493.1 CDS infB NC_012695.1 1731039 1733966 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1731039..1733966 Burkholderia pseudomallei MSHR346 7889361 YP_002896494.1 CDS rbfA NC_012695.1 1734024 1734440 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1734024..1734440 Burkholderia pseudomallei MSHR346 7888660 YP_002896495.1 CDS truB NC_012695.1 1734494 1735402 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1734494..1735402 Burkholderia pseudomallei MSHR346 7889529 YP_002896496.1 CDS GBP346_A1787 NC_012695.1 1735673 1737232 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; multidrug resistance protein Y complement(1735673..1737232) Burkholderia pseudomallei MSHR346 7890726 YP_002896497.1 CDS GBP346_A1788 NC_012695.1 1737255 1738490 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR00998; multidrug resistance protein A complement(1737255..1738490) Burkholderia pseudomallei MSHR346 7889227 YP_002896498.1 CDS GBP346_A1789 NC_012695.1 1738558 1740054 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor lipoprotein, NodT family complement(1738558..1740054) Burkholderia pseudomallei MSHR346 7889011 YP_002896499.1 CDS GBP346_A1790 NC_012695.1 1740154 1740651 R identified by match to protein family HMM PF01047; transcriptional regulator, MarR family complement(1740154..1740651) Burkholderia pseudomallei MSHR346 7890428 YP_002896500.1 CDS GBP346_A1791 NC_012695.1 1740851 1740991 R hypothetical protein complement(1740851..1740991) Burkholderia pseudomallei MSHR346 7888711 YP_002896501.1 CDS typA NC_012695.1 1740944 1742770 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA/BipA 1740944..1742770 Burkholderia pseudomallei MSHR346 7890035 YP_002896502.1 CDS sucA NC_012695.1 1743109 1745973 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1743109..1745973 Burkholderia pseudomallei MSHR346 7886790 YP_002896503.1 CDS sucB NC_012695.1 1746108 1747385 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1746108..1747385 Burkholderia pseudomallei MSHR346 7887197 YP_002896504.1 CDS lpdA_1 NC_012695.1 1747485 1748915 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1747485..1748915 Burkholderia pseudomallei MSHR346 7888062 YP_002896505.1 CDS GBP346_A1796 NC_012695.1 1749019 1750119 D identified by match to protein family HMM PF03969; ATPase, AFG1 family 1749019..1750119 Burkholderia pseudomallei MSHR346 7888907 YP_002896506.1 CDS GBP346_A1797 NC_012695.1 1750314 1750724 D hypothetical protein 1750314..1750724 Burkholderia pseudomallei MSHR346 7889694 YP_002896507.1 CDS GBP346_A1798 NC_012695.1 1750961 1751422 R putative lipoprotein complement(1750961..1751422) Burkholderia pseudomallei MSHR346 7890393 YP_002896508.1 CDS GBP346_A1800 NC_012695.1 1751445 1751669 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1751445..1751669 Burkholderia pseudomallei MSHR346 7889510 YP_002896509.1 CDS GBP346_A1799 NC_012695.1 1751663 1753318 R identified by match to protein family HMM PF08479; polypeptide-transport-associated domain protein ShlB-type complement(1751663..1753318) Burkholderia pseudomallei MSHR346 7888435 YP_002896510.1 CDS GBP346_A1801 NC_012695.1 1753493 1754749 R collagen triple helix repeat protein complement(1753493..1754749) Burkholderia pseudomallei MSHR346 7887960 YP_002896511.1 CDS GBP346_A1802 NC_012695.1 1754799 1756349 R collagen triple helix repeat protein complement(1754799..1756349) Burkholderia pseudomallei MSHR346 7887582 YP_002896512.1 CDS GBP346_A1803 NC_012695.1 1756315 1756629 D hypothetical protein 1756315..1756629 Burkholderia pseudomallei MSHR346 7888721 YP_002896513.1 CDS GBP346_A1804 NC_012695.1 1756835 1756972 D hypothetical protein 1756835..1756972 Burkholderia pseudomallei MSHR346 7890639 YP_002896514.1 CDS GBP346_A1805 NC_012695.1 1757053 1757250 D identified by match to protein family HMM PF04964; hypothetical protein 1757053..1757250 Burkholderia pseudomallei MSHR346 7888486 YP_002896515.1 CDS GBP346_A1806 NC_012695.1 1757333 1757833 D identified by match to protein family HMM PF01478; peptidase A24A, prepilin type IV 1757333..1757833 Burkholderia pseudomallei MSHR346 7888126 YP_002896516.1 CDS GBP346_A1807 NC_012695.1 1757830 1758297 D identified by match to protein family HMM PF07811; hypothetical protein 1757830..1758297 Burkholderia pseudomallei MSHR346 7887986 YP_002896517.1 CDS cpaB_1 NC_012695.1 1758377 1759276 D identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177; Flp pilus assembly protein CpaB 1758377..1759276 Burkholderia pseudomallei MSHR346 7889013 YP_002896518.1 CDS GBP346_A1809 NC_012695.1 1759340 1760665 D identified by match to protein family HMM PF00263; type II/III secretion system protein 1759340..1760665 Burkholderia pseudomallei MSHR346 7890178 YP_002896519.1 CDS GBP346_A1810 NC_012695.1 1760732 1761970 D response regulator receiver protein 1760732..1761970 Burkholderia pseudomallei MSHR346 7890755 YP_002896520.1 CDS tadA_1 NC_012695.1 1761974 1763317 D identified by match to protein family HMM PF00437; tight adherence protein TadA 1761974..1763317 Burkholderia pseudomallei MSHR346 7887063 YP_002896521.1 CDS GBP346_A1812 NC_012695.1 1763310 1764299 D identified by match to protein family HMM PF00482; type II secretion system protein 1763310..1764299 Burkholderia pseudomallei MSHR346 7887416 YP_002896522.1 CDS GBP346_A1813 NC_012695.1 1764305 1765327 D identified by match to protein family HMM PF00482; type II secretion system protein 1764305..1765327 Burkholderia pseudomallei MSHR346 7887851 YP_002896523.1 CDS GBP346_A1814 NC_012695.1 1765364 1766299 D identified by match to protein family HMM PF07719; TPR domain protein 1765364..1766299 Burkholderia pseudomallei MSHR346 7887939 YP_002896524.1 CDS GBP346_A1815 NC_012695.1 1766321 1766707 D hypothetical protein 1766321..1766707 Burkholderia pseudomallei MSHR346 7890732 YP_002896525.1 CDS GBP346_A1816 NC_012695.1 1766715 1768523 D membrane protein 1766715..1768523 Burkholderia pseudomallei MSHR346 7888492 YP_002896526.1 CDS GBP346_A1817 NC_012695.1 1768540 1769931 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; sigma-54 interaction domain/Fis family transcriptional regulator domain protein 1768540..1769931 Burkholderia pseudomallei MSHR346 7888717 YP_002896527.1 CDS GBP346_A1818 NC_012695.1 1770022 1770735 D hypothetical protein 1770022..1770735 Burkholderia pseudomallei MSHR346 7888443 YP_002896528.1 CDS GBP346_A1819 NC_012695.1 1770886 1771530 R identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; hfq protein complement(1770886..1771530) Burkholderia pseudomallei MSHR346 7887951 YP_002896529.1 CDS GBP346_A1820 NC_012695.1 1771835 1772107 D hypothetical protein 1771835..1772107 Burkholderia pseudomallei MSHR346 7888733 YP_002896530.1 CDS GBP346_A1822 NC_012695.1 1772122 1772283 D hypothetical protein 1772122..1772283 Burkholderia pseudomallei MSHR346 7890601 YP_002896531.1 CDS GBP346_A1821 NC_012695.1 1772271 1773269 R hypothetical protein complement(1772271..1773269) Burkholderia pseudomallei MSHR346 7887216 YP_002896532.1 CDS GBP346_A1823 NC_012695.1 1773290 1775062 R identified by match to protein family HMM PF00501; long-chain-fatty-acid--CoA ligase complement(1773290..1775062) Burkholderia pseudomallei MSHR346 7889297 YP_002896533.1 CDS GBP346_A1824 NC_012695.1 1775059 1775172 R hypothetical protein complement(1775059..1775172) Burkholderia pseudomallei MSHR346 7888919 YP_002896534.1 CDS GBP346_A1825 NC_012695.1 1775247 1776197 R identified by match to protein family HMM PF00440; transcriptional regulator, TetR family complement(1775247..1776197) Burkholderia pseudomallei MSHR346 7887017 YP_002896535.1 CDS GBP346_A1826 NC_012695.1 1776414 1777640 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, sialate:H+ symporter complement(1776414..1777640) Burkholderia pseudomallei MSHR346 7887912 YP_002896536.1 CDS GBP346_A1827 NC_012695.1 1777844 1778089 R hypothetical protein complement(1777844..1778089) Burkholderia pseudomallei MSHR346 7890835 YP_002896537.1 CDS GBP346_A1828 NC_012695.1 1778072 1778626 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 1778072..1778626 Burkholderia pseudomallei MSHR346 7888587 YP_002896538.1 CDS GBP346_A1829 NC_012695.1 1778770 1779396 D identified by match to protein family HMM PF08857; hypothetical protein 1778770..1779396 Burkholderia pseudomallei MSHR346 7888247 YP_002896539.1 CDS GBP346_A1830 NC_012695.1 1779443 1781155 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate permease family protein 1779443..1781155 Burkholderia pseudomallei MSHR346 7889337 YP_002896540.1 CDS GBP346_A1831 NC_012695.1 1781590 1783176 R hypothetical protein complement(1781590..1783176) Burkholderia pseudomallei MSHR346 7889903 YP_002896541.1 CDS GBP346_A1832 NC_012695.1 1783413 1784900 R identified by match to protein family HMM PF04185; phosphoesterase family protein complement(1783413..1784900) Burkholderia pseudomallei MSHR346 7888348 YP_002896542.1 CDS GBP346_A1833 NC_012695.1 1785051 1785353 R hypothetical protein complement(1785051..1785353) Burkholderia pseudomallei MSHR346 7887390 YP_002896543.1 CDS GBP346_A1834 NC_012695.1 1785434 1787146 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis domain protein 1785434..1787146 Burkholderia pseudomallei MSHR346 7888853 YP_002896544.1 CDS GBP346_A1835 NC_012695.1 1787188 1787316 D hypothetical protein 1787188..1787316 Burkholderia pseudomallei MSHR346 7889484 YP_002896545.1 CDS rnr NC_012695.1 1787660 1790320 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 1787660..1790320 Burkholderia pseudomallei MSHR346 7889180 YP_002896546.1 CDS GBP346_A1839 NC_012695.1 1790452 1791195 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase, TrmH family, group 3 1790452..1791195 Burkholderia pseudomallei MSHR346 7889978 YP_002896547.1 CDS GBP346_A1840 NC_012695.1 1791206 1791505 D hypothetical protein 1791206..1791505 Burkholderia pseudomallei MSHR346 7888334 YP_002896548.1 CDS GBP346_A1841 NC_012695.1 1791568 1792467 D identified by match to protein family HMM PF01471; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase AmiD 1791568..1792467 Burkholderia pseudomallei MSHR346 7889066 YP_002896549.1 CDS rpiA NC_012695.1 1792736 1793431 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1792736..1793431 Burkholderia pseudomallei MSHR346 7890119 YP_002896550.1 CDS GBP346_A1843 NC_012695.1 1793769 1794482 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 1793769..1794482 Burkholderia pseudomallei MSHR346 7890050 YP_002896551.1 CDS GBP346_A1845 NC_012695.1 1794582 1795565 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; oxidoreductase, NAD-binding 1794582..1795565 Burkholderia pseudomallei MSHR346 7889788 YP_002896552.1 CDS GBP346_A1844 NC_012695.1 1795550 1795876 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1795550..1795876) Burkholderia pseudomallei MSHR346 7890466 YP_002896553.1 CDS GBP346_A1846 NC_012695.1 1795966 1796625 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein complement(1795966..1796625) Burkholderia pseudomallei MSHR346 7887143 YP_002896554.1 CDS GBP346_A1847 NC_012695.1 1796755 1797549 R identified by match to protein family HMM PF00497; amino acid ABC transporter, periplasmic amino acid-binding protein complement(1796755..1797549) Burkholderia pseudomallei MSHR346 7886696 YP_002896555.1 CDS pyrD NC_012695.1 1797660 1798697 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1797660..1798697) Burkholderia pseudomallei MSHR346 7887333 YP_002896556.1 CDS GBP346_A1849 NC_012695.1 1798802 1799632 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1798802..1799632) Burkholderia pseudomallei MSHR346 7887183 YP_002896557.1 CDS aat NC_012695.1 1799666 1800433 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1799666..1800433) Burkholderia pseudomallei MSHR346 7889732 YP_002896558.1 CDS GBP346_A1851 NC_012695.1 1800442 1800987 R identified by match to protein family HMM PF00293; nudix hydrolase 23, (atnudt23) complement(1800442..1800987) Burkholderia pseudomallei MSHR346 7890365 YP_002896559.1 CDS GBP346_A1853 NC_012695.1 1801635 1802204 D identified by match to protein family HMM PF03928; hypothetical protein 1801635..1802204 Burkholderia pseudomallei MSHR346 7889198 YP_002896560.1 CDS GBP346_A1854 NC_012695.1 1802209 1802547 D identified by match to protein family HMM PF00893; quaternary ammonium compound-resistance protein QacE 1802209..1802547 Burkholderia pseudomallei MSHR346 7888645 YP_002896561.1 CDS GBP346_A1855 NC_012695.1 1802577 1803719 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1802577..1803719 Burkholderia pseudomallei MSHR346 7887700 YP_002896562.1 CDS GBP346_A1856 NC_012695.1 1803810 1803968 D hypothetical protein 1803810..1803968 Burkholderia pseudomallei MSHR346 7888737 YP_002896563.1 CDS GBP346_A1857 NC_012695.1 1804001 1804159 D identified by glimmer; putative; hypothetical protein 1804001..1804159 Burkholderia pseudomallei MSHR346 7887374 YP_002896564.1 CDS GBP346_A1858 NC_012695.1 1804175 1804621 R hypothetical protein complement(1804175..1804621) Burkholderia pseudomallei MSHR346 7888807 YP_002896565.1 CDS ssuD_1 NC_012695.1 1804968 1806125 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1804968..1806125 Burkholderia pseudomallei MSHR346 7887188 YP_002896566.1 CDS GBP346_A1860 NC_012695.1 1806143 1806952 D identified by match to protein family HMM PF00528; putative aliphatic sulfonates transport permease protein SsuC 1806143..1806952 Burkholderia pseudomallei MSHR346 7889074 YP_002896567.1 CDS GBP346_A1861 NC_012695.1 1806949 1807932 D identified by match to protein family HMM PF00005; aliphatic sulfonates import ATP-binding protein SsuB 1806949..1807932 Burkholderia pseudomallei MSHR346 7886884 YP_002896568.1 CDS GBP346_A1862 NC_012695.1 1808021 1808236 D identified by match to protein family HMM PF03459; match to protein family HMM TIGR00638; molybdenum-pterin binding protein 1808021..1808236 Burkholderia pseudomallei MSHR346 7890655 YP_002896569.1 CDS GBP346_A1863 NC_012695.1 1808365 1808562 D hypothetical protein 1808365..1808562 Burkholderia pseudomallei MSHR346 7888925 YP_002896570.1 CDS GBP346_A1864 NC_012695.1 1808636 1808890 D hypothetical protein 1808636..1808890 Burkholderia pseudomallei MSHR346 7890237 YP_002896571.1 CDS GBP346_A1866 NC_012695.1 1809857 1811176 R identified by match to protein family HMM PF01207; match to protein family HMM TIGR00742; tRNA-dihydrouridine synthase A complement(1809857..1811176) Burkholderia pseudomallei MSHR346 7889173 YP_002896572.1 CDS GBP346_A1867 NC_012695.1 1810959 1811414 D hypothetical protein 1810959..1811414 Burkholderia pseudomallei MSHR346 7889757 YP_002896573.1 CDS GBP346_A1868 NC_012695.1 1811465 1812772 R identified by match to protein family HMM PF00375; transporter, DAACS family complement(1811465..1812772) Burkholderia pseudomallei MSHR346 7887910 YP_002896574.1 CDS GBP346_A1869 NC_012695.1 1812997 1813329 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1812997..1813329 Burkholderia pseudomallei MSHR346 7887781 YP_002896575.1 CDS GBP346_A1870 NC_012695.1 1813388 1813594 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1813388..1813594 Burkholderia pseudomallei MSHR346 7888381 YP_002896576.1 CDS GBP346_A1871 NC_012695.1 1813955 1814431 R identified by match to protein family HMM PF01638; putative transcriptional regulator complement(1813955..1814431) Burkholderia pseudomallei MSHR346 7890352 YP_002896577.1 CDS GBP346_A1872 NC_012695.1 1814613 1815050 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 1814613..1815050 Burkholderia pseudomallei MSHR346 7887816 YP_002896578.1 CDS GBP346_A1873 NC_012695.1 1815326 1816378 D identified by match to protein family HMM PF00248; protein tas 1815326..1816378 Burkholderia pseudomallei MSHR346 7887200 YP_002896579.1 CDS GBP346_A1874 NC_012695.1 1816734 1817795 D identified by match to protein family HMM PF03773; permease 1816734..1817795 Burkholderia pseudomallei MSHR346 7889266 YP_002896580.1 CDS GBP346_A1875 NC_012695.1 1818110 1818532 D hypothetical protein 1818110..1818532 Burkholderia pseudomallei MSHR346 7890604 YP_002896581.1 CDS GBP346_A1876 NC_012695.1 1818638 1819474 R identified by match to protein family HMM PF01061; match to protein family HMM TIGR01291; ABC transporter, permease NodJ complement(1818638..1819474) Burkholderia pseudomallei MSHR346 7888148 YP_002896582.1 CDS nodI NC_012695.1 1819479 1820438 R involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI complement(1819479..1820438) Burkholderia pseudomallei MSHR346 7888238 YP_002896583.1 CDS GBP346_A1878 NC_012695.1 1820623 1821114 D identified by match to protein family HMM PF00582; universal stress family protein 1820623..1821114 Burkholderia pseudomallei MSHR346 7889683 YP_002896584.1 CDS GBP346_A1879 NC_012695.1 1821533 1822267 R hypothetical protein complement(1821533..1822267) Burkholderia pseudomallei MSHR346 7887131 YP_002896585.1 CDS GBP346_A1880 NC_012695.1 1822301 1822501 R hypothetical protein complement(1822301..1822501) Burkholderia pseudomallei MSHR346 7889553 YP_002896586.1 CDS GBP346_A1881 NC_012695.1 1822520 1822660 D hypothetical protein 1822520..1822660 Burkholderia pseudomallei MSHR346 7887859 YP_002896587.1 CDS lexA NC_012695.1 1822690 1823337 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1822690..1823337) Burkholderia pseudomallei MSHR346 7890379 YP_002896588.1 CDS GBP346_A1883 NC_012695.1 1823401 1823571 R hypothetical protein complement(1823401..1823571) Burkholderia pseudomallei MSHR346 7887010 YP_002896589.1 CDS GBP346_A1884 NC_012695.1 1823640 1824677 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971; sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) 1823640..1824677 Burkholderia pseudomallei MSHR346 7887961 YP_002896590.1 CDS cysT NC_012695.1 1824810 1825703 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; sulfate ABC transporter, permease protein CysT 1824810..1825703 Burkholderia pseudomallei MSHR346 7888758 YP_002896591.1 CDS cysW NC_012695.1 1825700 1826734 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; sulfate ABC transporter, permease protein CysW 1825700..1826734 Burkholderia pseudomallei MSHR346 7887415 YP_002896592.1 CDS GBP346_A1887 NC_012695.1 1826748 1827803 D identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; match to protein family HMM TIGR00968; sulfate/thiosulfate import ATP-binding protein CysA (Sulfate-transporting ATPase) 1826748..1827803 Burkholderia pseudomallei MSHR346 7890372 YP_002896593.1 CDS GBP346_A1888 NC_012695.1 1827873 1828799 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator CysB-like protein 1827873..1828799 Burkholderia pseudomallei MSHR346 7890760 YP_002896594.1 CDS GBP346_A1889 NC_012695.1 1828914 1829063 D hypothetical protein 1828914..1829063 Burkholderia pseudomallei MSHR346 7889346 YP_002896595.1 CDS GBP346_A1890 NC_012695.1 1829158 1830120 D identified by match to protein family HMM PF00532; binding protein component of ABC ribose transporter 1829158..1830120 Burkholderia pseudomallei MSHR346 7889414 YP_002896596.1 CDS GBP346_A1891 NC_012695.1 1830181 1830297 R hypothetical protein complement(1830181..1830297) Burkholderia pseudomallei MSHR346 7890440 YP_002896597.1 CDS GBP346_A1892 NC_012695.1 1830263 1831834 D identified by match to protein family HMM PF00005; putative ribose ABC transporter, ATP-binding protein 1830263..1831834 Burkholderia pseudomallei MSHR346 7889154 YP_002896598.1 CDS GBP346_A1893 NC_012695.1 1831905 1832918 D identified by match to protein family HMM PF02653; membrane protein component of ABC ribose transporter 1831905..1832918 Burkholderia pseudomallei MSHR346 7888901 YP_002896599.1 CDS GBP346_A1894 NC_012695.1 1832948 1833979 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor RbsR 1832948..1833979 Burkholderia pseudomallei MSHR346 7888018 YP_002896600.1 CDS rbsK_1 NC_012695.1 1833976 1834950 D identified by match to protein family HMM PF00294; match to protein family HMM PF08543; match to protein family HMM TIGR02152; ribokinase 1833976..1834950 Burkholderia pseudomallei MSHR346 7887136 YP_002896601.1 CDS GBP346_A1896 NC_012695.1 1835165 1837045 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein I 1835165..1837045 Burkholderia pseudomallei MSHR346 7888097 YP_002896602.1 CDS GBP346_A1897 NC_012695.1 1837374 1837751 D hypothetical protein 1837374..1837751 Burkholderia pseudomallei MSHR346 7890851 YP_002896603.1 CDS GBP346_A1898 NC_012695.1 1837928 1839850 D identified by match to protein family HMM PF06798; match to protein family HMM PF08298; histidine kinase 1837928..1839850 Burkholderia pseudomallei MSHR346 7889645 YP_002896604.1 CDS GBP346_A1899 NC_012695.1 1839974 1841239 D identified by match to protein family HMM PF04285; hypothetical protein 1839974..1841239 Burkholderia pseudomallei MSHR346 7889152 YP_002896605.1 CDS GBP346_A1900 NC_012695.1 1841239 1842921 D identified by match to protein family HMM PF04293; SpoVR family protein 1841239..1842921 Burkholderia pseudomallei MSHR346 7889735 YP_002896606.1 CDS GBP346_A1901 NC_012695.1 1842888 1843283 D hypothetical protein 1842888..1843283 Burkholderia pseudomallei MSHR346 7890241 YP_002896607.1 CDS GBP346_A1902 NC_012695.1 1843391 1844695 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883; alpha-ketoglutarate permease 1843391..1844695 Burkholderia pseudomallei MSHR346 7888105 YP_002896608.1 CDS GBP346_A1903 NC_012695.1 1844948 1845994 D ABC transporter substrate-binding protein 1844948..1845994 Burkholderia pseudomallei MSHR346 7887644 YP_002896609.1 CDS GBP346_A1904 NC_012695.1 1846046 1846369 D hypothetical protein 1846046..1846369 Burkholderia pseudomallei MSHR346 7887427 YP_002896610.1 CDS GBP346_A1905 NC_012695.1 1846509 1847729 D identified by match to protein family HMM PF01610; transposase 1846509..1847729 Burkholderia pseudomallei MSHR346 7887904 YP_002896611.1 CDS GBP346_A1906 NC_012695.1 1847777 1848607 D identified by match to protein family HMM PF00005; taurine import ATP-binding protein TauB 1847777..1848607 Burkholderia pseudomallei MSHR346 7887053 YP_002896612.1 CDS GBP346_A1907 NC_012695.1 1848634 1849575 D identified by match to protein family HMM PF00528; permease 1848634..1849575 Burkholderia pseudomallei MSHR346 7890332 YP_002896613.1 CDS GBP346_A1908 NC_012695.1 1850133 1850324 D identified by match to protein family HMM PF04964; hypothetical protein 1850133..1850324 Burkholderia pseudomallei MSHR346 7889743 YP_002896614.1 CDS GBP346_A1909 NC_012695.1 1850350 1850868 D identified by match to protein family HMM PF01478; peptidase A24A, prepilin type IV 1850350..1850868 Burkholderia pseudomallei MSHR346 7890200 YP_002896615.1 CDS cpaB_2 NC_012695.1 1850881 1851933 D identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177; Flp pilus assembly protein CpaB 1850881..1851933 Burkholderia pseudomallei MSHR346 7888366 YP_002896616.1 CDS GBP346_A1911 NC_012695.1 1851968 1853416 D identified by match to protein family HMM PF00263; type II/III secretion system protein 1851968..1853416 Burkholderia pseudomallei MSHR346 7890588 YP_002896617.1 CDS GBP346_A1912 NC_012695.1 1853450 1853863 D putative lipoprotein 1853450..1853863 Burkholderia pseudomallei MSHR346 7889309 YP_002896618.1 CDS GBP346_A1913 NC_012695.1 1853874 1855109 D putative CpaE protein 1853874..1855109 Burkholderia pseudomallei MSHR346 7887157 YP_002896619.1 CDS GBP346_A1914 NC_012695.1 1855070 1856680 D identified by match to protein family HMM PF00437; CpaF 1855070..1856680 Burkholderia pseudomallei MSHR346 7887861 YP_002896620.1 CDS GBP346_A1915 NC_012695.1 1856677 1857672 D identified by match to protein family HMM PF00482; type II secretion system protein 1856677..1857672 Burkholderia pseudomallei MSHR346 7888869 YP_002896621.1 CDS GBP346_A1916 NC_012695.1 1857669 1858613 D identified by match to protein family HMM PF00482; type II secretion system protein 1857669..1858613 Burkholderia pseudomallei MSHR346 7888621 YP_002896622.1 CDS GBP346_A1917 NC_012695.1 1858610 1859722 D identified by match to protein family HMM PF07719; match to protein family HMM PF07721; tetratricopeptide repeat protein 1858610..1859722 Burkholderia pseudomallei MSHR346 7890218 YP_002896623.1 CDS GBP346_A1918 NC_012695.1 1859719 1860147 D identified by match to protein family HMM PF07811; TadE family protein 1859719..1860147 Burkholderia pseudomallei MSHR346 7887436 YP_002896624.1 CDS GBP346_A1919 NC_012695.1 1860140 1861171 D identified by match to protein family HMM PF07811; TadE family protein 1860140..1861171 Burkholderia pseudomallei MSHR346 7890708 YP_002896625.1 CDS GBP346_A1920 NC_012695.1 1861471 1862286 D identified by match to protein family HMM PF00497; polar amino acid ABC uptake transporter substrate binding protein 1861471..1862286 Burkholderia pseudomallei MSHR346 7889799 YP_002896626.1 CDS GBP346_A1921 NC_012695.1 1862331 1862450 D hypothetical protein 1862331..1862450 Burkholderia pseudomallei MSHR346 7888535 YP_002896627.1 CDS GBP346_A1922 NC_012695.1 1862447 1862683 D hypothetical protein 1862447..1862683 Burkholderia pseudomallei MSHR346 7889406 YP_002896628.1 CDS GBP346_A1923 NC_012695.1 1862685 1863410 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; general L-amino acid transport system permease protein AapQ 1862685..1863410 Burkholderia pseudomallei MSHR346 7889345 YP_002896629.1 CDS GBP346_A1924 NC_012695.1 1863413 1864156 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein 1863413..1864156 Burkholderia pseudomallei MSHR346 7890264 YP_002896630.1 CDS GBP346_A1925 NC_012695.1 1864198 1865613 R identified by match to protein family HMM PF01551; peptidase, M23/M37 family complement(1864198..1865613) Burkholderia pseudomallei MSHR346 7887139 YP_002896631.1 CDS GBP346_A1926 NC_012695.1 1865966 1866637 R identified by match to protein family HMM PF00440; match to protein family HMM PF08361; regulator AmrR complement(1865966..1866637) Burkholderia pseudomallei MSHR346 7887174 YP_002896632.1 CDS GBP346_A1927 NC_012695.1 1866781 1867980 D MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein precursor 1866781..1867980 Burkholderia pseudomallei MSHR346 7888022 YP_002896633.1 CDS GBP346_A1928 NC_012695.1 1867997 1871128 D MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 1867997..1871128 Burkholderia pseudomallei MSHR346 7887570 YP_002896634.1 CDS oprA NC_012695.1 1871125 1872675 D identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane efflux protein OprA 1871125..1872675 Burkholderia pseudomallei MSHR346 7890461 YP_002896635.1 CDS GBP346_A1931 NC_012695.1 1872662 1872790 D hypothetical protein 1872662..1872790 Burkholderia pseudomallei MSHR346 7888823 YP_002896636.1 CDS GBP346_A1930 NC_012695.1 1872751 1873023 R hypothetical protein complement(1872751..1873023) Burkholderia pseudomallei MSHR346 7887438 YP_002896637.1 CDS GBP346_A1932 NC_012695.1 1873020 1873175 R identified by glimmer; putative; hypothetical protein complement(1873020..1873175) Burkholderia pseudomallei MSHR346 7889823 YP_002896638.1 CDS GBP346_A1933 NC_012695.1 1873234 1873605 R transcriptional regulator, AraC family complement(1873234..1873605) Burkholderia pseudomallei MSHR346 7889614 YP_002896639.1 CDS GBP346_A1934 NC_012695.1 1873828 1874169 D hypothetical protein 1873828..1874169 Burkholderia pseudomallei MSHR346 7888527 YP_002896640.1 CDS GBP346_A1935 NC_012695.1 1874171 1874434 R identified by glimmer; putative; hypothetical protein complement(1874171..1874434) Burkholderia pseudomallei MSHR346 7886924 YP_002896641.1 CDS GBP346_A1936 NC_012695.1 1874617 1875129 D identified by match to protein family HMM PF00419; fimbrial protein 1874617..1875129 Burkholderia pseudomallei MSHR346 7890403 YP_002896642.1 CDS GBP346_A1937 NC_012695.1 1875279 1877720 D identified by match to protein family HMM PF00577; fimbrial usher protein 1875279..1877720 Burkholderia pseudomallei MSHR346 7890259 YP_002896643.1 CDS GBP346_A1938 NC_012695.1 1877841 1878590 D identified by match to protein family HMM PF00345; MrpD 1877841..1878590 Burkholderia pseudomallei MSHR346 7890885 YP_002896644.1 CDS GBP346_A1939 NC_012695.1 1878587 1879612 D fimbrial protein 1878587..1879612 Burkholderia pseudomallei MSHR346 7886702 YP_002896645.1 CDS GBP346_A1940 NC_012695.1 1879663 1881426 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(1879663..1881426) Burkholderia pseudomallei MSHR346 7887040 YP_002896646.1 CDS GBP346_A1941 NC_012695.1 1881423 1881551 R hypothetical protein complement(1881423..1881551) Burkholderia pseudomallei MSHR346 7888794 YP_002896647.1 CDS GBP346_A1942 NC_012695.1 1881560 1883161 R identified by match to protein family HMM PF00733; asparagine synthase family protein complement(1881560..1883161) Burkholderia pseudomallei MSHR346 7889700 YP_002896648.1 CDS GBP346_A1943 NC_012695.1 1883238 1883948 R hypothetical protein complement(1883238..1883948) Burkholderia pseudomallei MSHR346 7888913 YP_002896649.1 CDS GBP346_A1944 NC_012695.1 1884001 1884144 R hypothetical protein complement(1884001..1884144) Burkholderia pseudomallei MSHR346 7887035 YP_002896650.1 CDS GBP346_A1945 NC_012695.1 1884384 1884692 R hypothetical protein complement(1884384..1884692) Burkholderia pseudomallei MSHR346 7887915 YP_002896651.1 CDS GBP346_A1946 NC_012695.1 1884741 1885730 D identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1884741..1885730 Burkholderia pseudomallei MSHR346 7888324 YP_002896652.1 CDS GBP346_A1947 NC_012695.1 1885832 1886779 D identified by match to protein family HMM PF00532; ribose ABC transporter, periplasmic ribose-binding protein 1885832..1886779 Burkholderia pseudomallei MSHR346 7890570 YP_002896653.1 CDS rbsA NC_012695.1 1886773 1888380 D identified by match to protein family HMM PF00005; ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein 1886773..1888380 Burkholderia pseudomallei MSHR346 7888513 YP_002896654.1 CDS GBP346_A1949 NC_012695.1 1888373 1889392 D identified by match to protein family HMM PF02653; ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein 1888373..1889392 Burkholderia pseudomallei MSHR346 7887187 YP_002896655.1 CDS GBP346_A1950 NC_012695.1 1889389 1889613 D hypothetical protein 1889389..1889613 Burkholderia pseudomallei MSHR346 7888407 YP_002896656.1 CDS GBP346_A1951 NC_012695.1 1889610 1890701 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family 1889610..1890701 Burkholderia pseudomallei MSHR346 7889571 YP_002896657.1 CDS GBP346_A1952 NC_012695.1 1890732 1892273 D identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, fggy family 1890732..1892273 Burkholderia pseudomallei MSHR346 7887481 YP_002896658.1 CDS GBP346_A1953 NC_012695.1 1892270 1893016 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1892270..1893016 Burkholderia pseudomallei MSHR346 7888294 YP_002896659.1 CDS GBP346_A1954 NC_012695.1 1893106 1893234 D hypothetical protein 1893106..1893234 Burkholderia pseudomallei MSHR346 7890769 YP_002896660.1 CDS GBP346_A1955 NC_012695.1 1893231 1894052 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1893231..1894052 Burkholderia pseudomallei MSHR346 7888482 YP_002896661.1 CDS GBP346_A1956 NC_012695.1 1894087 1894800 D RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 1894087..1894800 Burkholderia pseudomallei MSHR346 7890390 YP_002896662.1 CDS GBP346_A1957 NC_012695.1 1894856 1895098 D identified by match to protein family HMM PF03621; MbtH domain protein 1894856..1895098 Burkholderia pseudomallei MSHR346 7887863 YP_002896663.1 CDS GBP346_A1958 NC_012695.1 1895157 1896173 D identified by match to protein family HMM PF02668; putative syringomycin biosynthesis enzyme 1895157..1896173 Burkholderia pseudomallei MSHR346 7888217 YP_002896664.1 CDS GBP346_A1959 NC_012695.1 1896211 1897101 D identified by match to protein family HMM PF00005; ferric enterobactin transport ATP-binding protein FepC 1896211..1897101 Burkholderia pseudomallei MSHR346 7887855 YP_002896665.1 CDS GBP346_A1960 NC_012695.1 1897098 1899218 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1897098..1899218 Burkholderia pseudomallei MSHR346 7888460 YP_002896666.1 CDS GBP346_A1961 NC_012695.1 1899215 1900021 D ferric iron reductase protein 1899215..1900021 Burkholderia pseudomallei MSHR346 7889917 YP_002896667.1 CDS GBP346_A1962 NC_012695.1 1900018 1901214 D identified by match to protein family HMM PF01497; iron compound ABC transporter, periplasmic iron-compound-binding protein 1900018..1901214 Burkholderia pseudomallei MSHR346 7887497 YP_002896668.1 CDS GBP346_A1963 NC_012695.1 1901413 1901988 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF09351; hypothetical protein complement(1901413..1901988) Burkholderia pseudomallei MSHR346 7888667 YP_002896669.1 CDS GBP346_A1964 NC_012695.1 1902486 1904174 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01194; cyclic peptide ABC transporter, ATP-binding protein complement(1902486..1904174) Burkholderia pseudomallei MSHR346 7886819 YP_002896670.1 CDS GBP346_A1965 NC_012695.1 1904559 1904738 R hypothetical protein complement(1904559..1904738) Burkholderia pseudomallei MSHR346 7888327 YP_002896671.1 CDS GBP346_A1966 NC_012695.1 1904817 1914719 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D 1904817..1914719 Burkholderia pseudomallei MSHR346 7890907 YP_002896672.1 CDS GBP346_A1967 NC_012695.1 1914768 1919987 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; putative non-ribosomal peptide synthetase 1914768..1919987 Burkholderia pseudomallei MSHR346 7889586 YP_002896673.1 CDS pvdA NC_012695.1 1919984 1921537 D L-ornithine 5-monooxygenase 1919984..1921537 Burkholderia pseudomallei MSHR346 7889509 YP_002896674.1 CDS GBP346_A1969 NC_012695.1 1921585 1923798 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783; ornibactin receptor 1921585..1923798 Burkholderia pseudomallei MSHR346 7887737 YP_002896675.1 CDS GBP346_A1970 NC_012695.1 1923863 1924702 D hypothetical protein 1923863..1924702 Burkholderia pseudomallei MSHR346 7890409 YP_002896676.1 CDS GBP346_A1971 NC_012695.1 1925008 1926606 R identified by match to protein family HMM PF01656; match to protein family HMM PF07685; cobyrinic Acid a,c-diamide synthase complement(1925008..1926606) Burkholderia pseudomallei MSHR346 7890568 YP_002896677.1 CDS cobO NC_012695.1 1926611 1927213 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1926611..1927213) Burkholderia pseudomallei MSHR346 7888312 YP_002896678.1 CDS GBP346_A1973 NC_012695.1 1927272 1927718 R catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG complement(1927272..1927718) Burkholderia pseudomallei MSHR346 7890771 YP_002896679.1 CDS GBP346_A1975 NC_012695.1 1927972 1928187 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1927972..1928187 Burkholderia pseudomallei MSHR346 7890362 YP_002896680.1 CDS hoxN NC_012695.1 1928588 1929883 D identified by match to protein family HMM PF03824; match to protein family HMM TIGR00802; high-affinity nickel transport protein 1928588..1929883 Burkholderia pseudomallei MSHR346 7889758 YP_002896681.1 CDS cobW NC_012695.1 1930005 1931078 D identified by match to protein family HMM PF02492; match to protein family HMM PF07683; match to protein family HMM TIGR02475; cobalamin biosynthesis protein CobW 1930005..1931078 Burkholderia pseudomallei MSHR346 7887930 YP_002896682.1 CDS cobN NC_012695.1 1931145 1934990 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1931145..1934990 Burkholderia pseudomallei MSHR346 7888419 YP_002896683.1 CDS GBP346_A1979 NC_012695.1 1934987 1935616 D hypothetical protein 1934987..1935616 Burkholderia pseudomallei MSHR346 7890374 YP_002896684.1 CDS GBP346_A1980 NC_012695.1 1935613 1936896 D identified by match to protein family HMM PF01078; match to protein family HMM PF07726; match to protein family HMM PF07728; magnesium chelatase subunit ChlI 1935613..1936896 Burkholderia pseudomallei MSHR346 7889740 YP_002896685.1 CDS GBP346_A1982 NC_012695.1 1936977 1937591 D protoporphyrin IX magnesium chelatase 1936977..1937591 Burkholderia pseudomallei MSHR346 7888641 YP_002896686.1 CDS GBP346_A1981 NC_012695.1 1937557 1937790 R hypothetical protein complement(1937557..1937790) Burkholderia pseudomallei MSHR346 7887933 YP_002896687.1 CDS GBP346_A1983 NC_012695.1 1937931 1938617 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02230; carboxylesterase 1937931..1938617 Burkholderia pseudomallei MSHR346 7888395 YP_002896688.1 CDS GBP346_A1984 NC_012695.1 1938642 1938914 D identified by glimmer; putative; hypothetical protein 1938642..1938914 Burkholderia pseudomallei MSHR346 7889855 YP_002896689.1 CDS GBP346_A1985 NC_012695.1 1938952 1939278 R hypothetical protein complement(1938952..1939278) Burkholderia pseudomallei MSHR346 7889301 YP_002896690.1 CDS GBP346_A1986 NC_012695.1 1939275 1939469 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(1939275..1939469) Burkholderia pseudomallei MSHR346 7889230 YP_002896691.1 CDS GBP346_A1987 NC_012695.1 1939639 1941000 R identified by match to protein family HMM PF02839; glycosyl hydrolase, family 18 complement(1939639..1941000) Burkholderia pseudomallei MSHR346 7890733 YP_002896692.1 CDS GBP346_A1988 NC_012695.1 1941345 1943195 R identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466; precorrin-3B C(17)-methyltransferase complement(1941345..1943195) Burkholderia pseudomallei MSHR346 7887304 YP_002896693.1 CDS cobI NC_012695.1 1943192 1943926 R catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase complement(1943192..1943926) Burkholderia pseudomallei MSHR346 7889704 YP_002896694.1 CDS cobH NC_012695.1 1943923 1944549 R catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase complement(1943923..1944549) Burkholderia pseudomallei MSHR346 7890329 YP_002896695.1 CDS cobG NC_012695.1 1944542 1945990 R identified by match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02435; precorrin-3B synthase complement(1944542..1945990) Burkholderia pseudomallei MSHR346 7890508 YP_002896696.1 CDS GBP346_A1993 NC_012695.1 1946214 1946372 R hypothetical protein complement(1946214..1946372) Burkholderia pseudomallei MSHR346 7887440 YP_002896697.1 CDS cobL NC_012695.1 1946388 1947614 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase (decarboxylating) 1946388..1947614 Burkholderia pseudomallei MSHR346 7889237 YP_002896698.1 CDS cbiD NC_012695.1 1947611 1948705 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1947611..1948705 Burkholderia pseudomallei MSHR346 7886910 YP_002896699.1 CDS cobK NC_012695.1 1948702 1949436 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1948702..1949436 Burkholderia pseudomallei MSHR346 7890914 YP_002896700.1 CDS cobM NC_012695.1 1949775 1950500 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1949775..1950500 Burkholderia pseudomallei MSHR346 7888224 YP_002896701.1 CDS GBP346_A1998 NC_012695.1 1950579 1952144 R identified by match to protein family HMM PF02638; putative lipoprotein complement(1950579..1952144) Burkholderia pseudomallei MSHR346 7888383 YP_002896702.1 CDS GBP346_A1999 NC_012695.1 1952275 1953459 R identified by match to protein family HMM PF07690; major facilitator family transporter complement(1952275..1953459) Burkholderia pseudomallei MSHR346 7887815 YP_002896703.1 CDS GBP346_A2000 NC_012695.1 1953583 1954077 D identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 1953583..1954077 Burkholderia pseudomallei MSHR346 7890895 YP_002896704.1 CDS GBP346_A2001 NC_012695.1 1954424 1955641 R identified by match to protein family HMM PF01094; extracellular ligand-binding receptor complement(1954424..1955641) Burkholderia pseudomallei MSHR346 7889613 YP_002896705.1 CDS GBP346_A2002 NC_012695.1 1955759 1955947 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, MarR family complement(1955759..1955947) Burkholderia pseudomallei MSHR346 7888104 YP_002896706.1 CDS GBP346_A2003 NC_012695.1 1955947 1956297 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, MarR family complement(1955947..1956297) Burkholderia pseudomallei MSHR346 7888516 YP_002896707.1 CDS GBP346_A2004 NC_012695.1 1956340 1956681 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative; hypothetical protein 1956340..1956681 Burkholderia pseudomallei MSHR346 7889845 YP_002896708.1 CDS GBP346_A2005 NC_012695.1 1956842 1957546 R identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase family protein complement(1956842..1957546) Burkholderia pseudomallei MSHR346 7888827 YP_002896709.1 CDS GBP346_A2006 NC_012695.1 1957830 1958750 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(1957830..1958750) Burkholderia pseudomallei MSHR346 7887647 YP_002896710.1 CDS GBP346_A2007 NC_012695.1 1958848 1959297 D identified by match to protein family HMM PF03928; PduO protein 1958848..1959297 Burkholderia pseudomallei MSHR346 7888691 YP_002896711.1 CDS GBP346_A2008 NC_012695.1 1959294 1960088 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1959294..1960088 Burkholderia pseudomallei MSHR346 7890485 YP_002896712.1 CDS GBP346_A2009 NC_012695.1 1960132 1960320 R identified by glimmer; putative; hypothetical protein complement(1960132..1960320) Burkholderia pseudomallei MSHR346 7887167 YP_002896713.1 CDS arcC NC_012695.1 1960320 1961261 R reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(1960320..1961261) Burkholderia pseudomallei MSHR346 7890395 YP_002896714.1 CDS argF_2 NC_012695.1 1961347 1962357 R catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase complement(1961347..1962357) Burkholderia pseudomallei MSHR346 7887870 YP_002896715.1 CDS arcA NC_012695.1 1962422 1963699 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(1962422..1963699) Burkholderia pseudomallei MSHR346 7886733 YP_002896716.1 CDS GBP346_A2013 NC_012695.1 1963696 1965156 R identified by match to protein family HMM PF00324; match to protein family HMM TIGR00905; arginine/ornithine antiporter complement(1963696..1965156) Burkholderia pseudomallei MSHR346 7887261 YP_002896717.1 CDS GBP346_A2014 NC_012695.1 1965139 1965288 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1965139..1965288 Burkholderia pseudomallei MSHR346 7886817 YP_002896718.1 CDS GBP346_A2015 NC_012695.1 1965317 1965649 R hypothetical protein complement(1965317..1965649) Burkholderia pseudomallei MSHR346 7889096 YP_002896719.1 CDS GBP346_A2016 NC_012695.1 1965636 1965800 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1965636..1965800 Burkholderia pseudomallei MSHR346 7888088 YP_002896720.1 CDS GBP346_A2017 NC_012695.1 1965919 1966836 R hypothetical protein complement(1965919..1966836) Burkholderia pseudomallei MSHR346 7890070 YP_002896721.1 CDS GBP346_A2018 NC_012695.1 1966872 1967690 R identified by match to protein family HMM PF00528; amine ABC transporter, permease protein complement(1966872..1967690) Burkholderia pseudomallei MSHR346 7890170 YP_002896722.1 CDS GBP346_A2019 NC_012695.1 1967687 1968625 R identified by match to protein family HMM PF00005; glycine betaine/carnitine/choline transport ATP-binding protein opuCA complement(1967687..1968625) Burkholderia pseudomallei MSHR346 7889954 YP_002896723.1 CDS GBP346_A2020 NC_012695.1 1968622 1969842 R identified by match to protein family HMM PF00528; inner membrane ABC transporter permease protein YehY complement(1968622..1969842) Burkholderia pseudomallei MSHR346 7887613 YP_002896724.1 CDS GBP346_A2021 NC_012695.1 1969839 1970777 R identified by match to protein family HMM PF04069; amine ABC transporter, periplasmic amine-binding protein complement(1969839..1970777) Burkholderia pseudomallei MSHR346 7888271 YP_002896725.1 CDS GBP346_A2022 NC_012695.1 1971023 1971142 D hypothetical protein 1971023..1971142 Burkholderia pseudomallei MSHR346 7888177 YP_002896726.1 CDS GBP346_A2023 NC_012695.1 1971139 1971909 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF08241; match to protein family HMM PF08242; putative methyltransferase UbiE 1971139..1971909 Burkholderia pseudomallei MSHR346 7887824 YP_002896727.1 CDS GBP346_A2024 NC_012695.1 1972218 1973621 R identified by match to protein family HMM PF07690; drug resistance transporter, EmrB/QacA family complement(1972218..1973621) Burkholderia pseudomallei MSHR346 7889538 YP_002896728.1 CDS GBP346_A2025 NC_012695.1 1973698 1975674 R identified by match to protein family HMM PF00501; AMP-binding domain protein complement(1973698..1975674) Burkholderia pseudomallei MSHR346 7890449 YP_002896729.1 CDS GBP346_A2026 NC_012695.1 1976074 1976262 D hypothetical protein 1976074..1976262 Burkholderia pseudomallei MSHR346 7890950 YP_002896730.1 CDS GBP346_A2027 NC_012695.1 1976299 1976586 R hypothetical protein complement(1976299..1976586) Burkholderia pseudomallei MSHR346 7888007 YP_002896731.1 CDS GBP346_A2028 NC_012695.1 1976976 1978718 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1976976..1978718 Burkholderia pseudomallei MSHR346 7888873 YP_002896732.1 CDS GBP346_A2029 NC_012695.1 1978756 1979268 D identified by match to protein family HMM PF01584; chemotaxis protein CheW 1978756..1979268 Burkholderia pseudomallei MSHR346 7887605 YP_002896733.1 CDS GBP346_A2030 NC_012695.1 1979311 1979436 D hypothetical protein 1979311..1979436 Burkholderia pseudomallei MSHR346 7890850 YP_002896734.1 CDS GBP346_A2031 NC_012695.1 1979459 1980397 R identified by match to protein family HMM PF00892; integral membrane protein DUF6 complement(1979459..1980397) Burkholderia pseudomallei MSHR346 7888832 YP_002896735.1 CDS GBP346_A2032 NC_012695.1 1980562 1981362 R identified by match to protein family HMM PF00165; match to protein family HMM PF02311; transcriptional regulator, AraC family complement(1980562..1981362) Burkholderia pseudomallei MSHR346 7890431 YP_002896736.1 CDS GBP346_A2033 NC_012695.1 1981441 1981560 D identified by glimmer; putative; hypothetical protein 1981441..1981560 Burkholderia pseudomallei MSHR346 7889413 YP_002896737.1 CDS GBP346_A2034 NC_012695.1 1981717 1982937 D identified by match to protein family HMM PF00267; putative outer membrane porin 1981717..1982937 Burkholderia pseudomallei MSHR346 7889343 YP_002896738.1 CDS GBP346_A2036 NC_012695.1 1983168 1983440 D hypothetical protein 1983168..1983440 Burkholderia pseudomallei MSHR346 7887796 YP_002896739.1 CDS GBP346_A2035 NC_012695.1 1983398 1985320 R identified by match to protein family HMM PF00975; syringopeptin synthetase C complement(1983398..1985320) Burkholderia pseudomallei MSHR346 7888673 YP_002896740.1 CDS GBP346_A2037 NC_012695.1 1986268 1986492 D identified by match to protein family HMM PF03621; MbtH domain protein 1986268..1986492 Burkholderia pseudomallei MSHR346 7889489 YP_002896741.1 CDS GBP346_A2038 NC_012695.1 1986479 1987363 D identified by match to protein family HMM PF02373; JmjC domain protein 1986479..1987363 Burkholderia pseudomallei MSHR346 7887453 YP_002896742.1 CDS GBP346_A2039 NC_012695.1 1987425 1988435 D identified by match to protein family HMM PF00155; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 1987425..1988435 Burkholderia pseudomallei MSHR346 7888330 YP_002896743.1 CDS GBP346_A2040 NC_012695.1 1988463 1989545 D hypothetical protein 1988463..1989545 Burkholderia pseudomallei MSHR346 7889888 YP_002896744.1 CDS GBP346_A2041 NC_012695.1 1989601 1990419 D identified by match to protein family HMM PF00551; nonribosomal peptide synthetase 1989601..1990419 Burkholderia pseudomallei MSHR346 7890291 YP_002896745.1 CDS argG_2 NC_012695.1 1990460 1991674 D identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; argininosuccinate synthase 1990460..1991674 Burkholderia pseudomallei MSHR346 7889714 YP_002896746.1 CDS argH_2 NC_012695.1 1991671 1993071 D identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase 1991671..1993071 Burkholderia pseudomallei MSHR346 7887108 YP_002896747.1 CDS GBP346_A2044 NC_012695.1 1993089 1993985 D identified by match to protein family HMM PF00288; putative kinase 1993089..1993985 Burkholderia pseudomallei MSHR346 7888077 YP_002896748.1 CDS GBP346_A2045 NC_012695.1 1994039 1995271 D identified by match to protein family HMM PF07690; major facilitator family transporter 1994039..1995271 Burkholderia pseudomallei MSHR346 7890613 YP_002896749.1 CDS GBP346_A2046 NC_012695.1 1995268 1995909 D hypothetical protein 1995268..1995909 Burkholderia pseudomallei MSHR346 7888302 YP_002896750.1 CDS GBP346_A2047 NC_012695.1 1995906 1997033 D identified by match to protein family HMM PF00291; cysteine synthase 1995906..1997033 Burkholderia pseudomallei MSHR346 7887195 YP_002896751.1 CDS GBP346_A2048 NC_012695.1 1997068 1999770 D identified by match to protein family HMM PF00206; match to protein family HMM PF02222; match to protein family HMM PF02655; argininosuccinate lyase 1997068..1999770 Burkholderia pseudomallei MSHR346 7890679 YP_002896752.1 CDS ltaE NC_012695.1 1999813 2000973 D identified by match to protein family HMM PF00202; match to protein family HMM PF01212; low-specificity L-threonine aldolase 1999813..2000973 Burkholderia pseudomallei MSHR346 7890619 YP_002896753.1 CDS GBP346_A2050 NC_012695.1 2000970 2001602 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2000970..2001602 Burkholderia pseudomallei MSHR346 7890156 YP_002896754.1 CDS GBP346_A2051 NC_012695.1 2001599 2020399 D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; non-ribosomal peptide synthase 2001599..2020399 Burkholderia pseudomallei MSHR346 7889840 YP_002896755.1 CDS GBP346_A2052 NC_012695.1 2020405 2020524 D hypothetical protein 2020405..2020524 Burkholderia pseudomallei MSHR346 7887987 YP_002896756.1 CDS GBP346_A2053 NC_012695.1 2020490 2022211 D identified by match to protein family HMM PF02543; carbamoyltransferase family protein 2020490..2022211 Burkholderia pseudomallei MSHR346 7890868 YP_002896757.1 CDS GBP346_A2054 NC_012695.1 2022336 2024708 D identified by match to protein family HMM PF01804; family S45 unassigned peptidase 2022336..2024708 Burkholderia pseudomallei MSHR346 7887651 YP_002896758.1 CDS GBP346_A2055 NC_012695.1 2024962 2025084 R identified by glimmer; putative; hypothetical protein complement(2024962..2025084) Burkholderia pseudomallei MSHR346 7888703 YP_002896759.1 CDS GBP346_A2056 NC_012695.1 2025336 2025740 R putative non-ribosomal peptide synthetase complement(2025336..2025740) Burkholderia pseudomallei MSHR346 7887668 YP_002896760.1 CDS GBP346_A2057 NC_012695.1 2026286 2026483 R hypothetical protein complement(2026286..2026483) Burkholderia pseudomallei MSHR346 7886783 YP_002896761.1 CDS GBP346_A2058 NC_012695.1 2026781 2028958 R identified by match to protein family HMM PF00657; match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; hypothetical protein complement(2026781..2028958) Burkholderia pseudomallei MSHR346 7890268 YP_002896762.1 CDS GBP346_A2059 NC_012695.1 2029546 2029911 R hypothetical protein complement(2029546..2029911) Burkholderia pseudomallei MSHR346 7888884 YP_002896763.1 CDS GBP346_A2060 NC_012695.1 2030039 2030191 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; TPR repeat protein complement(2030039..2030191) Burkholderia pseudomallei MSHR346 7888009 YP_002896764.1 CDS GBP346_A2061 NC_012695.1 2030502 2031134 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; TPR repeat protein complement(2030502..2031134) Burkholderia pseudomallei MSHR346 7890845 YP_002896765.1 CDS GBP346_A2062 NC_012695.1 2031562 2036313 R identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; hemagglutinin family protein complement(2031562..2036313) Burkholderia pseudomallei MSHR346 7889920 YP_002896766.1 CDS GBP346_A2063 NC_012695.1 2036594 2036758 D identified by glimmer; putative; hypothetical protein 2036594..2036758 Burkholderia pseudomallei MSHR346 7889293 YP_002896767.1 CDS GBP346_A2064 NC_012695.1 2038300 2038695 D identified by match to protein family HMM PF01527; transposase 2038300..2038695 Burkholderia pseudomallei MSHR346 7889537 YP_002896768.1 CDS GBP346_A2065 NC_012695.1 2039150 2039338 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; isrso10-transposase orfb protein 2039150..2039338 Burkholderia pseudomallei MSHR346 7887871 YP_002896769.1 CDS GBP346_A2066 NC_012695.1 2039460 2040053 D identified by match to protein family HMM PF00239; DNA-invertase 2039460..2040053 Burkholderia pseudomallei MSHR346 7890353 YP_002896770.1 CDS GBP346_A2067 NC_012695.1 2040109 2040300 D identified by glimmer; putative; hypothetical protein 2040109..2040300 Burkholderia pseudomallei MSHR346 7887874 YP_002896771.1 CDS GBP346_A2068 NC_012695.1 2040420 2040704 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(2040420..2040704) Burkholderia pseudomallei MSHR346 7888296 YP_002896772.1 CDS GBP346_A2069 NC_012695.1 2040953 2041075 R identified by glimmer; putative; hypothetical protein complement(2040953..2041075) Burkholderia pseudomallei MSHR346 7888401 YP_002896773.1 CDS GBP346_A2070 NC_012695.1 2041090 2041203 R identified by glimmer; putative; hypothetical protein complement(2041090..2041203) Burkholderia pseudomallei MSHR346 7888484 YP_002896774.1 CDS GBP346_A2071 NC_012695.1 2041340 2041618 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(2041340..2041618) Burkholderia pseudomallei MSHR346 7887408 YP_002896775.1 CDS GBP346_A2072 NC_012695.1 2041575 2041733 D hypothetical protein 2041575..2041733 Burkholderia pseudomallei MSHR346 7887411 YP_002896776.1 CDS GBP346_A2073 NC_012695.1 2041740 2041994 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABK13593.1; site-specific recombinase, phage integrase family 2041740..2041994 Burkholderia pseudomallei MSHR346 7889455 YP_002896777.1 CDS GBP346_A2074 NC_012695.1 2042197 2042595 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family 2042197..2042595 Burkholderia pseudomallei MSHR346 7886919 YP_002896778.1 CDS GBP346_A2075 NC_012695.1 2042863 2043507 R identified by match to protein family HMM PF00239; match to protein family HMM PF02796; recombinase complement(2042863..2043507) Burkholderia pseudomallei MSHR346 7888059 YP_002896779.1 CDS GBP346_A2076 NC_012695.1 2045546 2046214 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptonal regulator, GntR-family 2045546..2046214 Burkholderia pseudomallei MSHR346 7890741 YP_002896780.1 CDS GBP346_A2077 NC_012695.1 2046417 2046836 D identified by match to protein family HMM PF02371; transposase 2046417..2046836 Burkholderia pseudomallei MSHR346 7888481 YP_002896781.1 CDS GBP346_A2078 NC_012695.1 2046865 2046996 R identified by glimmer; putative; hypothetical protein complement(2046865..2046996) Burkholderia pseudomallei MSHR346 7887533 YP_002896782.1 CDS GBP346_A2079 NC_012695.1 2047025 2047405 R ISDet2, transposase OrfB complement(2047025..2047405) Burkholderia pseudomallei MSHR346 7888038 YP_002896783.1 CDS GBP346_A2080 NC_012695.1 2047973 2048284 D hypothetical protein 2047973..2048284 Burkholderia pseudomallei MSHR346 7888361 YP_002896784.1 CDS GBP346_A2081 NC_012695.1 2048318 2049229 D identified by match to protein family HMM PF05114; hypothetical protein 2048318..2049229 Burkholderia pseudomallei MSHR346 7889059 YP_002896785.1 CDS GBP346_A2082 NC_012695.1 2049219 2049998 D hypothetical protein 2049219..2049998 Burkholderia pseudomallei MSHR346 7888212 YP_002896786.1 CDS GBP346_A2083 NC_012695.1 2050004 2050507 D identified by match to protein family HMM PF07681; DoxX family protein 2050004..2050507 Burkholderia pseudomallei MSHR346 7887504 YP_002896787.1 CDS GBP346_A2084 NC_012695.1 2050504 2051214 D identified by match to protein family HMM PF06532; hypothetical protein 2050504..2051214 Burkholderia pseudomallei MSHR346 7887123 YP_002896788.1 CDS GBP346_A2085 NC_012695.1 2051233 2051874 R identified by match to protein family HMM PF06532; hypothetical protein complement(2051233..2051874) Burkholderia pseudomallei MSHR346 7889776 YP_002896789.1 CDS GBP346_A2086 NC_012695.1 2051871 2052416 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2051871..2052416) Burkholderia pseudomallei MSHR346 7888464 YP_002896790.1 CDS GBP346_A2087 NC_012695.1 2052918 2053124 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transposase mutator type 2052918..2053124 Burkholderia pseudomallei MSHR346 7890721 YP_002896791.1 CDS GBP346_A2088 NC_012695.1 2053336 2053614 D identified by similarity to GB:AAA25862.1; putative IS401 transposase subunit 2053336..2053614 Burkholderia pseudomallei MSHR346 7888747 YP_002896792.1 CDS GBP346_A2089 NC_012695.1 2053646 2053789 R identified by glimmer; putative; hypothetical protein complement(2053646..2053789) Burkholderia pseudomallei MSHR346 7890567 YP_002896793.1 CDS GBP346_A2090 NC_012695.1 2053802 2054125 D identified by match to protein family HMM PF00581; rhodanese domain protein 2053802..2054125 Burkholderia pseudomallei MSHR346 7889149 YP_002896794.1 CDS GBP346_A2091 NC_012695.1 2054178 2055458 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(2054178..2055458) Burkholderia pseudomallei MSHR346 7887973 YP_002896795.1 CDS GBP346_A2092 NC_012695.1 2055455 2056840 R identified by match to protein family HMM PF01979; amidohydrolase complement(2055455..2056840) Burkholderia pseudomallei MSHR346 7888137 YP_002896796.1 CDS GBP346_A2093 NC_012695.1 2056940 2057830 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2056940..2057830 Burkholderia pseudomallei MSHR346 7887727 YP_002896797.1 CDS GBP346_A2094 NC_012695.1 2058011 2059102 D identified by match to protein family HMM PF06032; OsrF 2058011..2059102 Burkholderia pseudomallei MSHR346 7887638 YP_002896798.1 CDS hutU_1 NC_012695.1 2059121 2060761 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2059121..2060761 Burkholderia pseudomallei MSHR346 7889022 YP_002896799.1 CDS GBP346_A2096 NC_012695.1 2060798 2062120 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, metabolite:H+ symporter 2060798..2062120 Burkholderia pseudomallei MSHR346 7890857 YP_002896800.1 CDS GBP346_A2097 NC_012695.1 2062138 2063772 D identified by match to protein family HMM PF00221; phenylalanine and histidine ammonia-lyase 2062138..2063772 Burkholderia pseudomallei MSHR346 7887311 YP_002896801.1 CDS GBP346_A2098 NC_012695.1 2063862 2064323 D transposase 2063862..2064323 Burkholderia pseudomallei MSHR346 7888854 YP_002896802.1 CDS GBP346_A2099 NC_012695.1 2064614 2065714 D identified by match to protein family HMM PF00267; putative outer membrane porin 2064614..2065714 Burkholderia pseudomallei MSHR346 7890261 YP_002896803.1 CDS GBP346_A2100 NC_012695.1 2065784 2066326 R integrase catalytic region complement(2065784..2066326) Burkholderia pseudomallei MSHR346 7890773 YP_002896804.1 CDS GBP346_A2101 NC_012695.1 2066278 2066421 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; ISAfe7, transposase OrfA complement(2066278..2066421) Burkholderia pseudomallei MSHR346 7890504 YP_002896805.1 CDS GBP346_A2102 NC_012695.1 2066542 2067792 R hypothetical protein complement(2066542..2067792) Burkholderia pseudomallei MSHR346 7888771 YP_002896806.1 CDS GBP346_A2103 NC_012695.1 2068411 2068527 R identified by glimmer; putative; hypothetical protein complement(2068411..2068527) Burkholderia pseudomallei MSHR346 7889717 YP_002896807.1 CDS GBP346_A2104 NC_012695.1 2069004 2069600 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative transposase for insertion sequence element 2069004..2069600 Burkholderia pseudomallei MSHR346 7890652 YP_002896808.1 CDS GBP346_A2105 NC_012695.1 2069815 2070528 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2069815..2070528) Burkholderia pseudomallei MSHR346 7886859 YP_002896809.1 CDS GBP346_A2106 NC_012695.1 2070795 2070944 R identified by glimmer; putative; hypothetical protein complement(2070795..2070944) Burkholderia pseudomallei MSHR346 7890113 YP_002896810.1 CDS GBP346_A2107 NC_012695.1 2071357 2071488 R identified by glimmer; putative; hypothetical protein complement(2071357..2071488) Burkholderia pseudomallei MSHR346 7888646 YP_002896811.1 CDS cysC_1 NC_012695.1 2071542 2072147 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; adenylyl-sulfate kinase complement(2071542..2072147) Burkholderia pseudomallei MSHR346 7887925 YP_002896812.1 CDS GBP346_A2109 NC_012695.1 2072196 2072378 D identified by glimmer; putative; hypothetical protein 2072196..2072378 Burkholderia pseudomallei MSHR346 7887877 YP_002896813.1 CDS GBP346_A2110 NC_012695.1 2072425 2074050 R hypothetical protein complement(2072425..2074050) Burkholderia pseudomallei MSHR346 7887511 YP_002896814.1 CDS GBP346_A2111 NC_012695.1 2074092 2078447 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; match to protein family HMM PF07723; match to protein family HMM PF08241; tetratricopeptide repeat family protein complement(2074092..2078447) Burkholderia pseudomallei MSHR346 7888288 YP_002896815.1 CDS GBP346_A2112 NC_012695.1 2078567 2079976 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; HlyD family secretion protein complement(2078567..2079976) Burkholderia pseudomallei MSHR346 7889682 YP_002896816.1 CDS GBP346_A2113 NC_012695.1 2079973 2082264 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, permease/ATP-binding protein complement(2079973..2082264) Burkholderia pseudomallei MSHR346 7889633 YP_002896817.1 CDS GBP346_A2114 NC_012695.1 2082299 2083174 R sulfotransferase domain protein complement(2082299..2083174) Burkholderia pseudomallei MSHR346 7889966 YP_002896818.1 CDS GBP346_A2115 NC_012695.1 2083171 2083644 R hypothetical protein complement(2083171..2083644) Burkholderia pseudomallei MSHR346 7889557 YP_002896819.1 CDS GBP346_A2116 NC_012695.1 2083776 2093465 R identified by match to protein family HMM PF00353; match to protein family HMM PF01839; type I secretion target repeat protein complement(2083776..2093465) Burkholderia pseudomallei MSHR346 7889224 YP_002896820.1 CDS GBP346_A2117 NC_012695.1 2093576 2095486 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(2093576..2095486) Burkholderia pseudomallei MSHR346 7889433 YP_002896821.1 CDS GBP346_A2118 NC_012695.1 2095504 2096268 R identified by match to protein family HMM PF00691; OmpA family protein complement(2095504..2096268) Burkholderia pseudomallei MSHR346 7890526 YP_002896822.1 CDS GBP346_A2119 NC_012695.1 2096890 2097225 R identified by match to protein family HMM PF00816; BphA complement(2096890..2097225) Burkholderia pseudomallei MSHR346 7890585 YP_002896823.1 CDS GBP346_A2120 NC_012695.1 2097422 2097589 R hypothetical protein complement(2097422..2097589) Burkholderia pseudomallei MSHR346 7889531 YP_002896824.1 CDS GBP346_A2121 NC_012695.1 2098006 2098296 R hypothetical protein complement(2098006..2098296) Burkholderia pseudomallei MSHR346 7889932 YP_002896825.1 CDS GBP346_A2122 NC_012695.1 2098421 2099584 R identified by match to protein family HMM PF00267; putative outer membrane porin complement(2098421..2099584) Burkholderia pseudomallei MSHR346 7890405 YP_002896826.1 CDS GBP346_A2123 NC_012695.1 2099683 2101143 R identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780; succinate-semialdehyde dehydrogenase [NADP+] (ssdh) complement(2099683..2101143) Burkholderia pseudomallei MSHR346 7888293 YP_002896827.1 CDS GBP346_A2124 NC_012695.1 2101165 2101944 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family complement(2101165..2101944) Burkholderia pseudomallei MSHR346 7887423 YP_002896828.1 CDS GBP346_A2125 NC_012695.1 2101910 2103001 R identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; spermidine/putrescine import ATP-binding protein PotA complement(2101910..2103001) Burkholderia pseudomallei MSHR346 7888477 YP_002896829.1 CDS GBP346_A2126 NC_012695.1 2103018 2103812 R identified by match to protein family HMM PF00528; putrescine transport system permease protein PotI complement(2103018..2103812) Burkholderia pseudomallei MSHR346 7890731 YP_002896830.1 CDS GBP346_A2127 NC_012695.1 2103814 2104698 R identified by match to protein family HMM PF00528; ABC transporter, membrane spanning protein complement(2103814..2104698) Burkholderia pseudomallei MSHR346 7887799 YP_002896831.1 CDS GBP346_A2128 NC_012695.1 2104777 2105808 R identified by match to protein family HMM PF01547; ABC transporter, substrate binding protein complement(2104777..2105808) Burkholderia pseudomallei MSHR346 7890474 YP_002896832.1 CDS GBP346_A2129 NC_012695.1 2105878 2106192 R identified by match to protein family HMM PF07978; nipsnap superfamily complement(2105878..2106192) Burkholderia pseudomallei MSHR346 7888844 YP_002896833.1 CDS GBP346_A2130 NC_012695.1 2106262 2107734 R identified by match to protein family HMM PF00171; betaine aldehyde dehydrogenase (badh) complement(2106262..2107734) Burkholderia pseudomallei MSHR346 7888554 YP_002896834.1 CDS GBP346_A2131 NC_012695.1 2107778 2108821 R identified by match to protein family HMM PF00296; glucose-6-phosphate dehydrogenase complement(2107778..2108821) Burkholderia pseudomallei MSHR346 7888364 YP_002896835.1 CDS GBP346_A2132 NC_012695.1 2108930 2109886 R identified by match to protein family HMM PF01613; nitrilotriacetate monooxygenase complement(2108930..2109886) Burkholderia pseudomallei MSHR346 7889436 YP_002896836.1 CDS GBP346_A2133 NC_012695.1 2109879 2110763 R identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein complement(2109879..2110763) Burkholderia pseudomallei MSHR346 7889713 YP_002896837.1 CDS GBP346_A2134 NC_012695.1 2110753 2111340 R identified by match to protein family HMM PF06684; peptide synthase complement(2110753..2111340) Burkholderia pseudomallei MSHR346 7889547 YP_002896838.1 CDS GBP346_A2135 NC_012695.1 2111637 2112407 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family complement(2111637..2112407) Burkholderia pseudomallei MSHR346 7887233 YP_002896839.1 CDS GBP346_A2136 NC_012695.1 2112655 2112828 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; transposase, mutator type 2112655..2112828 Burkholderia pseudomallei MSHR346 7887312 YP_002896840.1 CDS GBP346_A2137 NC_012695.1 2112937 2113089 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; ISPsy18, transposase 2112937..2113089 Burkholderia pseudomallei MSHR346 7888315 YP_002896841.1 CDS GBP346_A2138 NC_012695.1 2113391 2113732 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; bacteriophage gp31 protein complement(2113391..2113732) Burkholderia pseudomallei MSHR346 7887456 YP_002896842.1 CDS GBP346_A2139 NC_012695.1 2113823 2113990 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2113823..2113990) Burkholderia pseudomallei MSHR346 7887016 YP_002896843.1 CDS GBP346_A2140 NC_012695.1 2114121 2114273 D hypothetical protein 2114121..2114273 Burkholderia pseudomallei MSHR346 7890923 YP_002896844.1 CDS GBP346_A2141 NC_012695.1 2114563 2115633 D identified by match to protein family HMM PF01764; putative lipase 2114563..2115633 Burkholderia pseudomallei MSHR346 7886808 YP_002896845.1 CDS GBP346_A2142 NC_012695.1 2115848 2116222 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 2115848..2116222 Burkholderia pseudomallei MSHR346 7890302 YP_002896846.1 CDS GBP346_A2143 NC_012695.1 2116225 2116599 R hypothetical protein complement(2116225..2116599) Burkholderia pseudomallei MSHR346 7887598 YP_002896847.1 CDS GBP346_A2144 NC_012695.1 2116598 2116903 D identified by glimmer; putative; hypothetical protein 2116598..2116903 Burkholderia pseudomallei MSHR346 7887683 YP_002896848.1 CDS GBP346_A2145 NC_012695.1 2116925 2117047 R identified by glimmer; putative; hypothetical protein complement(2116925..2117047) Burkholderia pseudomallei MSHR346 7887319 YP_002896849.1 CDS GBP346_A2146 NC_012695.1 2117060 2117467 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2117060..2117467) Burkholderia pseudomallei MSHR346 7888874 YP_002896850.1 CDS GBP346_A2147 NC_012695.1 2117540 2118334 R identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase complement(2117540..2118334) Burkholderia pseudomallei MSHR346 7890272 YP_002896851.1 CDS GBP346_A2148 NC_012695.1 2118661 2121909 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; MrgS complement(2118661..2121909) Burkholderia pseudomallei MSHR346 7886799 YP_002896852.1 CDS GBP346_A2149 NC_012695.1 2121909 2122574 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF08281; DNA-binding response regulator, LuxR family complement(2121909..2122574) Burkholderia pseudomallei MSHR346 7890860 YP_002896853.1 CDS GBP346_A2150 NC_012695.1 2122876 2123337 R hypothetical protein complement(2122876..2123337) Burkholderia pseudomallei MSHR346 7890141 YP_002896854.1 CDS GBP346_A2151 NC_012695.1 2123343 2123846 R identified by glimmer; putative; hypothetical protein complement(2123343..2123846) Burkholderia pseudomallei MSHR346 7888896 YP_002896855.1 CDS GBP346_A2153 NC_012695.1 2124109 2124234 D identified by glimmer; putative; hypothetical protein 2124109..2124234 Burkholderia pseudomallei MSHR346 7886720 YP_002896856.1 CDS GBP346_A2152 NC_012695.1 2124231 2124410 R hypothetical protein complement(2124231..2124410) Burkholderia pseudomallei MSHR346 7888139 YP_002896857.1 CDS GBP346_A2154 NC_012695.1 2124689 2128246 R identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; Hep_Hag family protein complement(2124689..2128246) Burkholderia pseudomallei MSHR346 7889256 YP_002896858.1 CDS GBP346_A2155 NC_012695.1 2128459 2128617 R hypothetical protein complement(2128459..2128617) Burkholderia pseudomallei MSHR346 7889866 YP_002896859.1 CDS GBP346_A2156 NC_012695.1 2129073 2129321 D hypothetical protein 2129073..2129321 Burkholderia pseudomallei MSHR346 7888974 YP_002896860.1 CDS GBP346_A2157 NC_012695.1 2129487 2130458 R identified by match to protein family HMM PF00419; type-1 fimbrial protein, A subunit complement(2129487..2130458) Burkholderia pseudomallei MSHR346 7889016 YP_002896861.1 CDS fimD NC_012695.1 2130449 2133001 R identified by match to protein family HMM PF00577; fimbrial usher protein complement(2130449..2133001) Burkholderia pseudomallei MSHR346 7889330 YP_002896862.1 CDS GBP346_A2159 NC_012695.1 2133008 2133853 R identified by match to protein family HMM PF00345; match to protein family HMM PF02753; fimbrial assembly chaperone protein complement(2133008..2133853) Burkholderia pseudomallei MSHR346 7889146 YP_002896863.1 CDS GBP346_A2160 NC_012695.1 2133875 2134405 R identified by match to protein family HMM PF00419; fimbrial protein complement(2133875..2134405) Burkholderia pseudomallei MSHR346 7890406 YP_002896864.1 CDS GBP346_A2161 NC_012695.1 2135050 2135241 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2135050..2135241 Burkholderia pseudomallei MSHR346 7886777 YP_002896865.1 CDS GBP346_A2162 NC_012695.1 2135560 2136027 R identified by match to protein family HMM PF08670; mekhla domain protein complement(2135560..2136027) Burkholderia pseudomallei MSHR346 7890173 YP_002896866.1 CDS GBP346_A2163 NC_012695.1 2136129 2136320 D hypothetical protein 2136129..2136320 Burkholderia pseudomallei MSHR346 7887936 YP_002896867.1 CDS GBP346_A2164 NC_012695.1 2136287 2136412 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative lipoprotein 2136287..2136412 Burkholderia pseudomallei MSHR346 7888436 YP_002896868.1 CDS GBP346_A2165 NC_012695.1 2136611 2137699 D identified by match to protein family HMM TIGR01840; esterase, PHB depolymerase family 2136611..2137699 Burkholderia pseudomallei MSHR346 7889568 YP_002896869.1 CDS GBP346_A2166 NC_012695.1 2137856 2138005 R hypothetical protein complement(2137856..2138005) Burkholderia pseudomallei MSHR346 7889711 YP_002896870.1 CDS GBP346_A2167 NC_012695.1 2138002 2138772 R hypothetical protein complement(2138002..2138772) Burkholderia pseudomallei MSHR346 7890112 YP_002896871.1 CDS GBP346_A2168 NC_012695.1 2139402 2140079 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-containing complement(2139402..2140079) Burkholderia pseudomallei MSHR346 7886984 YP_002896872.1 CDS GBP346_A2169 NC_012695.1 2140076 2140276 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; alcohol dehydrogenase, iron-containing complement(2140076..2140276) Burkholderia pseudomallei MSHR346 7889374 YP_002896873.1 CDS GBP346_A2170 NC_012695.1 2140569 2140721 R identified by glimmer; putative; hypothetical protein complement(2140569..2140721) Burkholderia pseudomallei MSHR346 7888305 YP_002896874.1 CDS GBP346_A2171 NC_012695.1 2140722 2141270 D hypothetical protein 2140722..2141270 Burkholderia pseudomallei MSHR346 7889009 YP_002896875.1 CDS GBP346_A2173 NC_012695.1 2141399 2142097 D hypothetical protein 2141399..2142097 Burkholderia pseudomallei MSHR346 7888143 YP_002896876.1 CDS GBP346_A2172 NC_012695.1 2142058 2142258 R hypothetical protein complement(2142058..2142258) Burkholderia pseudomallei MSHR346 7890429 YP_002896877.1 CDS GBP346_A2174 NC_012695.1 2142235 2143677 D identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; alkylhalidase 2142235..2143677 Burkholderia pseudomallei MSHR346 7890927 YP_002896878.1 CDS GBP346_A2175 NC_012695.1 2143763 2145097 D identified by match to protein family HMM PF00999; sodium/hydrogen exchanger 2143763..2145097 Burkholderia pseudomallei MSHR346 7889729 YP_002896879.1 CDS GBP346_A2176 NC_012695.1 2145104 2146102 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain protein 2145104..2146102 Burkholderia pseudomallei MSHR346 7887997 YP_002896880.1 CDS GBP346_A2177 NC_012695.1 2146102 2147142 D oxygenase 2146102..2147142 Burkholderia pseudomallei MSHR346 7889555 YP_002896881.1 CDS GBP346_A2178 NC_012695.1 2147505 2149217 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(2147505..2149217) Burkholderia pseudomallei MSHR346 7887881 YP_002896882.1 CDS GBP346_A2179 NC_012695.1 2149432 2149917 R hypothetical protein complement(2149432..2149917) Burkholderia pseudomallei MSHR346 7886814 YP_002896883.1 CDS GBP346_A2180 NC_012695.1 2150038 2151627 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2150038..2151627) Burkholderia pseudomallei MSHR346 7888502 YP_002896884.1 CDS GBP346_A2181 NC_012695.1 2151802 2152542 R identified by match to protein family HMM PF01061; ABC-2 type transporter, permease protein complement(2151802..2152542) Burkholderia pseudomallei MSHR346 7889623 YP_002896885.1 CDS GBP346_A2182 NC_012695.1 2152539 2153543 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(2152539..2153543) Burkholderia pseudomallei MSHR346 7886708 YP_002896886.1 CDS GBP346_A2183 NC_012695.1 2153564 2154622 R identified by match to protein family HMM PF02424; ApbE family protein complement(2153564..2154622) Burkholderia pseudomallei MSHR346 7888938 YP_002896887.1 CDS GBP346_A2184 NC_012695.1 2154644 2155006 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2154644..2155006 Burkholderia pseudomallei MSHR346 7887676 YP_002896888.1 CDS nosZ NC_012695.1 2155282 2157249 D reduces nitrous oxide to nitrogen; nitrous-oxide reductase 2155282..2157249 Burkholderia pseudomallei MSHR346 7889062 YP_002896889.1 CDS nosD NC_012695.1 2157445 2158695 D identified by match to protein family HMM PF05048; copper ABC transporter, periplasmic copper-binding protein 2157445..2158695 Burkholderia pseudomallei MSHR346 7889464 YP_002896890.1 CDS nosF NC_012695.1 2158677 2159606 D identified by match to protein family HMM PF00005; copper ABC transporter, ATP-binding protein 2158677..2159606 Burkholderia pseudomallei MSHR346 7889052 YP_002896891.1 CDS GBP346_A2188 NC_012695.1 2159603 2160439 D membrane protein NosY 2159603..2160439 Burkholderia pseudomallei MSHR346 7888665 YP_002896892.1 CDS GBP346_A2189 NC_012695.1 2160436 2160966 D identified by match to protein family HMM PF05573; NosL 2160436..2160966 Burkholderia pseudomallei MSHR346 7889150 YP_002896893.1 CDS GBP346_A2190 NC_012695.1 2160977 2161246 D hypothetical protein 2160977..2161246 Burkholderia pseudomallei MSHR346 7888592 YP_002896894.1 CDS GBP346_A2191 NC_012695.1 2161249 2161653 D hypothetical protein 2161249..2161653 Burkholderia pseudomallei MSHR346 7890059 YP_002896895.1 CDS GBP346_A2192 NC_012695.1 2161675 2162169 D identified by match to protein family HMM PF00034; cytochrome c family protein 2161675..2162169 Burkholderia pseudomallei MSHR346 7889496 YP_002896896.1 CDS nosR NC_012695.1 2162228 2164360 D identified by match to protein family HMM PF04205; regulatory protein NosR 2162228..2164360 Burkholderia pseudomallei MSHR346 7890589 YP_002896897.1 CDS GBP346_A2194 NC_012695.1 2164357 2164695 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; phosphotransferase enzyme family protein 2164357..2164695 Burkholderia pseudomallei MSHR346 7890132 YP_002896898.1 CDS GBP346_A2196 NC_012695.1 2164767 2167196 D identified by match to protein family HMM PF00924; transporter, MscS family 2164767..2167196 Burkholderia pseudomallei MSHR346 7887196 YP_002896899.1 CDS GBP346_A2197 NC_012695.1 2167218 2167400 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2167218..2167400) Burkholderia pseudomallei MSHR346 7888080 YP_002896900.1 CDS GBP346_A2198 NC_012695.1 2167391 2167678 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; putative lipoprotein 2167391..2167678 Burkholderia pseudomallei MSHR346 7888749 YP_002896901.1 CDS GBP346_A2199 NC_012695.1 2167740 2168054 D hypothetical protein 2167740..2168054 Burkholderia pseudomallei MSHR346 7890756 YP_002896902.1 CDS GBP346_A2200 NC_012695.1 2168051 2168278 D hypothetical protein 2168051..2168278 Burkholderia pseudomallei MSHR346 7886964 YP_002896903.1 CDS GBP346_A2201 NC_012695.1 2168487 2168852 R identified by glimmer; putative; hypothetical protein complement(2168487..2168852) Burkholderia pseudomallei MSHR346 7886763 YP_002896904.1 CDS GBP346_A2202 NC_012695.1 2168861 2169259 R hypothetical protein complement(2168861..2169259) Burkholderia pseudomallei MSHR346 7888529 YP_002896905.1 CDS GBP346_A2203 NC_012695.1 2169496 2169786 D hypothetical protein 2169496..2169786 Burkholderia pseudomallei MSHR346 7886937 YP_002896906.1 CDS GBP346_A2204 NC_012695.1 2169853 2170143 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 2169853..2170143 Burkholderia pseudomallei MSHR346 7886966 YP_002896907.1 CDS corA NC_012695.1 2170151 2171128 R identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA complement(2170151..2171128) Burkholderia pseudomallei MSHR346 7887867 YP_002896908.1 CDS GBP346_A2206 NC_012695.1 2171333 2171494 D identified by match to protein family HMM PF08173; match to protein family HMM TIGR02106; hypothetical protein 2171333..2171494 Burkholderia pseudomallei MSHR346 7888862 YP_002896909.1 CDS GBP346_A2207 NC_012695.1 2171491 2172111 D hypothetical protein 2171491..2172111 Burkholderia pseudomallei MSHR346 7890482 YP_002896910.1 CDS lys NC_012695.1 2172314 2173414 R identified by match to protein family HMM PF01210; match to protein family HMM PF02254; match to protein family HMM PF02737; match to protein family HMM PF03435; saccharopine dehydrogenase complement(2172314..2173414) Burkholderia pseudomallei MSHR346 7888376 YP_002896911.1 CDS GBP346_A2209 NC_012695.1 2173493 2173627 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2173493..2173627) Burkholderia pseudomallei MSHR346 7887475 YP_002896912.1 CDS GBP346_A2210 NC_012695.1 2173721 2173987 R identified by glimmer; putative; hypothetical protein complement(2173721..2173987) Burkholderia pseudomallei MSHR346 7890519 YP_002896913.1 CDS GBP346_A2212 NC_012695.1 2174062 2175282 D identified by match to protein family HMM PF01610; transposase 2174062..2175282 Burkholderia pseudomallei MSHR346 7889901 YP_002896914.1 CDS GBP346_A2211 NC_012695.1 2175245 2175547 R hypothetical protein complement(2175245..2175547) Burkholderia pseudomallei MSHR346 7887193 YP_002896915.1 CDS GBP346_A2213 NC_012695.1 2175544 2176626 R hypothetical protein complement(2175544..2176626) Burkholderia pseudomallei MSHR346 7889879 YP_002896916.1 CDS GBP346_A2214 NC_012695.1 2176681 2177262 R identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family complement(2176681..2177262) Burkholderia pseudomallei MSHR346 7887113 YP_002896917.1 CDS GBP346_A2215 NC_012695.1 2177401 2177880 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; LtxA complement(2177401..2177880) Burkholderia pseudomallei MSHR346 7889850 YP_002896918.1 CDS GBP346_A2216 NC_012695.1 2177877 2178143 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; amino acid adenylation:Thioester reductase complement(2177877..2178143) Burkholderia pseudomallei MSHR346 7890370 YP_002896919.1 CDS GBP346_A2217 NC_012695.1 2178103 2178954 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; pristinamycin I synthase 3 and 4 complement(2178103..2178954) Burkholderia pseudomallei MSHR346 7890472 YP_002896920.1 CDS GBP346_A2218 NC_012695.1 2179072 2179587 D hypothetical protein 2179072..2179587 Burkholderia pseudomallei MSHR346 7887532 YP_002896921.1 CDS GBP346_A2219 NC_012695.1 2180035 2181060 R polyhydroxybutyrate depolymerase complement(2180035..2181060) Burkholderia pseudomallei MSHR346 7889539 YP_002896922.1 CDS GBP346_A2220 NC_012695.1 2181236 2181685 D hypothetical protein 2181236..2181685 Burkholderia pseudomallei MSHR346 7889691 YP_002896923.1 CDS GBP346_A2221 NC_012695.1 2182018 2182422 R hypothetical protein complement(2182018..2182422) Burkholderia pseudomallei MSHR346 7887583 YP_002896924.1 CDS GBP346_A2222 NC_012695.1 2182395 2183183 R membrane protein complement(2182395..2183183) Burkholderia pseudomallei MSHR346 7887664 YP_002896925.1 CDS GBP346_A2223 NC_012695.1 2183241 2184284 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family complement(2183241..2184284) Burkholderia pseudomallei MSHR346 7890696 YP_002896926.1 CDS GBP346_A2224 NC_012695.1 2184903 2185880 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; 2-ketogluconate reductase (2KR) (2-ketoaldonatereductase) complement(2184903..2185880) Burkholderia pseudomallei MSHR346 7888892 YP_002896927.1 CDS GBP346_A2225 NC_012695.1 2185885 2187162 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(2185885..2187162) Burkholderia pseudomallei MSHR346 7887643 YP_002896928.1 CDS GBP346_A2226 NC_012695.1 2187247 2188236 R identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase complement(2187247..2188236) Burkholderia pseudomallei MSHR346 7887388 YP_002896929.1 CDS GBP346_A2227 NC_012695.1 2188320 2189084 R identified by match to protein family HMM PF01261; AP endonuclease, family 2 complement(2188320..2189084) Burkholderia pseudomallei MSHR346 7887993 YP_002896930.1 CDS GBP346_A2228 NC_012695.1 2189200 2189349 R hypothetical protein complement(2189200..2189349) Burkholderia pseudomallei MSHR346 7888788 YP_002896931.1 CDS GBP346_A2229 NC_012695.1 2189380 2189754 D hypothetical protein 2189380..2189754 Burkholderia pseudomallei MSHR346 7890278 YP_002896932.1 CDS GBP346_A2230 NC_012695.1 2189816 2190718 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(2189816..2190718) Burkholderia pseudomallei MSHR346 7888283 YP_002896933.1 CDS GBP346_A2231 NC_012695.1 2190829 2191899 D identified by match to protein family HMM PF03601; match to protein family HMM TIGR00698; hypothetical protein 2190829..2191899 Burkholderia pseudomallei MSHR346 7886852 YP_002896934.1 CDS GBP346_A2232 NC_012695.1 2192009 2193748 D identified by match to protein family HMM PF00571; match to protein family HMM PF00654; putative voltage-gated ClC-type chloride channel ClcB 2192009..2193748 Burkholderia pseudomallei MSHR346 7890647 YP_002896935.1 CDS GBP346_A2233 NC_012695.1 2194038 2194658 R identified by match to protein family HMM PF00440; transcriptional regulator, TetR family complement(2194038..2194658) Burkholderia pseudomallei MSHR346 7888584 YP_002896936.1 CDS GBP346_A2234 NC_012695.1 2194771 2195982 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 2194771..2195982 Burkholderia pseudomallei MSHR346 7886938 YP_002896937.1 CDS GBP346_A2235 NC_012695.1 2195979 2199149 D identified by match to protein family HMM PF00873; acriflavin resistance protein 2195979..2199149 Burkholderia pseudomallei MSHR346 7887555 YP_002896938.1 CDS GBP346_A2236 NC_012695.1 2199152 2201056 D identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor 2199152..2201056 Burkholderia pseudomallei MSHR346 7886778 YP_002896939.1 CDS GBP346_A2237 NC_012695.1 2201105 2201443 R identified by glimmer; putative; hypothetical protein complement(2201105..2201443) Burkholderia pseudomallei MSHR346 7890801 YP_002896940.1 CDS GBP346_A2238 NC_012695.1 2201529 2202560 D identified by match to protein family HMM PF00376; match to protein family HMM PF05583; match to protein family HMM PF09278; transcriptional regulator, MerR family/albicidin resistance protein 2201529..2202560 Burkholderia pseudomallei MSHR346 7887840 YP_002896941.1 CDS GBP346_A2239 NC_012695.1 2202876 2203073 R identified by glimmer; putative; hypothetical protein complement(2202876..2203073) Burkholderia pseudomallei MSHR346 7890423 YP_002896942.1 CDS GBP346_A2240 NC_012695.1 2203067 2203927 R hypothetical protein complement(2203067..2203927) Burkholderia pseudomallei MSHR346 7890822 YP_002896943.1 CDS GBP346_A2241 NC_012695.1 2203949 2204173 R hypothetical protein complement(2203949..2204173) Burkholderia pseudomallei MSHR346 7887708 YP_002896944.1 CDS GBP346_A2242 NC_012695.1 2204184 2204747 R hypothetical protein complement(2204184..2204747) Burkholderia pseudomallei MSHR346 7889332 YP_002896945.1 CDS GBP346_A2243 NC_012695.1 2205060 2206463 R identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF07728; match to protein family HMM PF08448; sigma-54 dependent transcriptional regulator complement(2205060..2206463) Burkholderia pseudomallei MSHR346 7888470 YP_002896946.1 CDS GBP346_A2244 NC_012695.1 2206651 2207553 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2206651..2207553 Burkholderia pseudomallei MSHR346 7887230 YP_002896947.1 CDS GBP346_A2245 NC_012695.1 2207604 2209274 D identified by match to protein family HMM PF04273; match to protein family HMM PF07992; match to protein family HMM TIGR01244; oxidoreductase, pyridine nucleotide-disulphide family 2207604..2209274 Burkholderia pseudomallei MSHR346 7890476 YP_002896948.1 CDS GBP346_A2246 NC_012695.1 2209314 2210120 D identified by match to protein family HMM PF01925; hypothetical protein 2209314..2210120 Burkholderia pseudomallei MSHR346 7889942 YP_002896949.1 CDS GBP346_A2247 NC_012695.1 2210372 2211190 R identified by match to protein family HMM PF00528; putrescine ABC transporter, permease protein PotI complement(2210372..2211190) Burkholderia pseudomallei MSHR346 7888546 YP_002896950.1 CDS GBP346_A2248 NC_012695.1 2211187 2212050 R identified by match to protein family HMM PF00528; putrescine transport system permease protein PotH complement(2211187..2212050) Burkholderia pseudomallei MSHR346 7886753 YP_002896951.1 CDS potG NC_012695.1 2212113 2213273 R identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; putrescine ABC transporter, ATP-binding protein PotG complement(2212113..2213273) Burkholderia pseudomallei MSHR346 7886992 YP_002896952.1 CDS potF_2 NC_012695.1 2213364 2214458 R identified by match to protein family HMM PF01547; putrescine ABC transporter, periplasmic putrescine-binding protein complement(2213364..2214458) Burkholderia pseudomallei MSHR346 7888200 YP_002896953.1 CDS GBP346_A2251 NC_012695.1 2214845 2216152 D identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; mn2+/fe2+ transporter, nramp family 2214845..2216152 Burkholderia pseudomallei MSHR346 7890046 YP_002896954.1 CDS GBP346_A2252 NC_012695.1 2216157 2216402 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2216157..2216402 Burkholderia pseudomallei MSHR346 7888934 YP_002896955.1 CDS GBP346_A2253 NC_012695.1 2216554 2216757 D identified by match to protein family HMM PF06945; hypothetical protein 2216554..2216757 Burkholderia pseudomallei MSHR346 7889437 YP_002896956.1 CDS GBP346_A2254 NC_012695.1 2216883 2217467 R identified by match to protein family HMM PF03922; outer membrane protein, OmpW family complement(2216883..2217467) Burkholderia pseudomallei MSHR346 7888973 YP_002896957.1 CDS GBP346_A2255 NC_012695.1 2217600 2218790 R identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family complement(2217600..2218790) Burkholderia pseudomallei MSHR346 7887272 YP_002896958.1 CDS GBP346_A2256 NC_012695.1 2218989 2220425 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase complement(2218989..2220425) Burkholderia pseudomallei MSHR346 7889134 YP_002896959.1 CDS GBP346_A2257 NC_012695.1 2220741 2221376 D hypothetical protein 2220741..2221376 Burkholderia pseudomallei MSHR346 7889629 YP_002896960.1 CDS GBP346_A2258 NC_012695.1 2221524 2223323 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(2221524..2223323) Burkholderia pseudomallei MSHR346 7889943 YP_002896961.1 CDS GBP346_A2259 NC_012695.1 2223574 2226066 R identified by match to protein family HMM PF05170; AsmA family protein complement(2223574..2226066) Burkholderia pseudomallei MSHR346 7888989 YP_002896962.1 CDS GBP346_A2260 NC_012695.1 2226065 2226895 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2226065..2226895 Burkholderia pseudomallei MSHR346 7888405 YP_002896963.1 CDS GBP346_A2261 NC_012695.1 2226892 2227710 D identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein 2226892..2227710 Burkholderia pseudomallei MSHR346 7890748 YP_002896964.1 CDS GBP346_A2262 NC_012695.1 2228023 2228286 D phosphotransferase enzyme family protein 2228023..2228286 Burkholderia pseudomallei MSHR346 7890037 YP_002896965.1 CDS GBP346_A2263 NC_012695.1 2228363 2228908 R hypothetical protein complement(2228363..2228908) Burkholderia pseudomallei MSHR346 7890820 YP_002896966.1 CDS GBP346_A2264 NC_012695.1 2229201 2229719 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2229201..2229719) Burkholderia pseudomallei MSHR346 7890463 YP_002896967.1 CDS serB NC_012695.1 2229762 2230607 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 2229762..2230607 Burkholderia pseudomallei MSHR346 7889878 YP_002896968.1 CDS metC NC_012695.1 2230871 2232055 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(2230871..2232055) Burkholderia pseudomallei MSHR346 7889240 YP_002896969.1 CDS GBP346_A2267 NC_012695.1 2232320 2232898 R hypothetical protein complement(2232320..2232898) Burkholderia pseudomallei MSHR346 7889585 YP_002896970.1 CDS GBP346_A2268 NC_012695.1 2232915 2234198 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(2232915..2234198) Burkholderia pseudomallei MSHR346 7890908 YP_002896971.1 CDS GBP346_A2269 NC_012695.1 2234195 2235121 R identified by match to protein family HMM PF00294; kinase, PfkB family complement(2234195..2235121) Burkholderia pseudomallei MSHR346 7887755 YP_002896972.1 CDS rimO NC_012695.1 2235124 2236515 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(2235124..2236515) Burkholderia pseudomallei MSHR346 7888846 YP_002896973.1 CDS phaR NC_012695.1 2237099 2237671 R identified by match to protein family HMM PF05233; match to protein family HMM PF07879; match to protein family HMM TIGR01848; polyhydroxyalkanoate synthesis repressor PhaR complement(2237099..2237671) Burkholderia pseudomallei MSHR346 7890231 YP_002896974.1 CDS phbB NC_012695.1 2237808 2238548 R catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase complement(2237808..2238548) Burkholderia pseudomallei MSHR346 7889004 YP_002896975.1 CDS GBP346_A2273 NC_012695.1 2238674 2239855 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(2238674..2239855) Burkholderia pseudomallei MSHR346 7889590 YP_002896976.1 CDS phbC_1 NC_012695.1 2239952 2241772 R identified by match to protein family HMM PF00561; match to protein family HMM PF07167; match to protein family HMM TIGR01838; poly-beta-hydroxybutyrate polymerase complement(2239952..2241772) Burkholderia pseudomallei MSHR346 7890453 YP_002896977.1 CDS GBP346_A2275 NC_012695.1 2242301 2243137 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(2242301..2243137) Burkholderia pseudomallei MSHR346 7888353 YP_002896978.1 CDS GBP346_A2276 NC_012695.1 2243144 2244313 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D complement(2243144..2244313) Burkholderia pseudomallei MSHR346 7890582 YP_002896979.1 CDS GBP346_A2277 NC_012695.1 2244367 2245209 D identified by match to protein family HMM TIGR03302; competence lipoprotein ComL 2244367..2245209 Burkholderia pseudomallei MSHR346 7888453 YP_002896980.1 CDS GBP346_A2278 NC_012695.1 2245385 2247643 R helicase c2 complement(2245385..2247643) Burkholderia pseudomallei MSHR346 7890292 YP_002896981.1 CDS GBP346_A2279 NC_012695.1 2247706 2247921 R hypothetical protein complement(2247706..2247921) Burkholderia pseudomallei MSHR346 7889722 YP_002896982.1 CDS GBP346_A2280 NC_012695.1 2248030 2248779 R putative lipoprotein complement(2248030..2248779) Burkholderia pseudomallei MSHR346 7890343 YP_002896983.1 CDS GBP346_A2281 NC_012695.1 2248790 2248912 R hypothetical protein complement(2248790..2248912) Burkholderia pseudomallei MSHR346 7889632 YP_002896984.1 CDS GBP346_A2282 NC_012695.1 2248919 2251243 D identified by match to protein family HMM PF00575; match to protein family HMM PF09371; tex domain protein 2248919..2251243 Burkholderia pseudomallei MSHR346 7890810 YP_002896985.1 CDS kup NC_012695.1 2251478 2253346 R identified by match to protein family HMM PF02705; potassium uptake protein complement(2251478..2253346) Burkholderia pseudomallei MSHR346 7889103 YP_002896986.1 CDS GBP346_A2284 NC_012695.1 2253335 2253529 D hypothetical protein 2253335..2253529 Burkholderia pseudomallei MSHR346 7889158 YP_002896987.1 CDS GBP346_A2285 NC_012695.1 2253662 2254255 R identified by match to protein family HMM PF00156; phosphoribosyl transferase domain protein complement(2253662..2254255) Burkholderia pseudomallei MSHR346 7888982 YP_002896988.1 CDS purA NC_012695.1 2254262 2255608 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2254262..2255608) Burkholderia pseudomallei MSHR346 7889401 YP_002896989.1 CDS hisZ NC_012695.1 2255733 2256881 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(2255733..2256881) Burkholderia pseudomallei MSHR346 7887249 YP_002896990.1 CDS GBP346_A2288 NC_012695.1 2256993 2257184 R hypothetical protein complement(2256993..2257184) Burkholderia pseudomallei MSHR346 7889068 YP_002896991.1 CDS hflC NC_012695.1 2257209 2258108 R identified by match to protein family HMM PF01145; match to protein family HMM TIGR01932; HflC protein complement(2257209..2258108) Burkholderia pseudomallei MSHR346 7889136 YP_002896992.1 CDS GBP346_A2290 NC_012695.1 2258125 2259489 R identified by match to protein family HMM PF01145; match to protein family HMM TIGR01933; HflK protein complement(2258125..2259489) Burkholderia pseudomallei MSHR346 7888593 YP_002896993.1 CDS hflX NC_012695.1 2259535 2260698 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein HflX complement(2259535..2260698) Burkholderia pseudomallei MSHR346 7886834 YP_002896994.1 CDS hfq NC_012695.1 2260770 2261009 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(2260770..2261009) Burkholderia pseudomallei MSHR346 7889098 YP_002896995.1 CDS engA NC_012695.1 2261144 2262526 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2261144..2262526) Burkholderia pseudomallei MSHR346 7889276 YP_002896996.1 CDS GBP346_A2294 NC_012695.1 2262499 2262621 D hypothetical protein 2262499..2262621 Burkholderia pseudomallei MSHR346 7889913 YP_002896997.1 CDS yfgL NC_012695.1 2262756 2263901 R identified by match to protein family HMM PF01011; match to protein family HMM TIGR03300; outer membrane assembly lipoprotein YfgL complement(2262756..2263901) Burkholderia pseudomallei MSHR346 7887055 YP_002896998.1 CDS GBP346_A2296 NC_012695.1 2263946 2264575 R hypothetical protein complement(2263946..2264575) Burkholderia pseudomallei MSHR346 7887248 YP_002896999.1 CDS hisS NC_012695.1 2264628 2265968 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2264628..2265968) Burkholderia pseudomallei MSHR346 7889752 YP_002897000.1 CDS ispG NC_012695.1 2265987 2267237 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2265987..2267237) Burkholderia pseudomallei MSHR346 7890350 YP_002897001.1 CDS GBP346_A2299 NC_012695.1 2267381 2268391 R hypothetical protein complement(2267381..2268391) Burkholderia pseudomallei MSHR346 7887164 YP_002897002.1 CDS GBP346_A2300 NC_012695.1 2268611 2269747 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM enzyme, Cfr family complement(2268611..2269747) Burkholderia pseudomallei MSHR346 7890067 YP_002897003.1 CDS ndk NC_012695.1 2269789 2270214 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(2269789..2270214) Burkholderia pseudomallei MSHR346 7890600 YP_002897004.1 CDS GBP346_A2302 NC_012695.1 2270463 2271161 D identified by match to protein family HMM PF01027; hypothetical protein 2270463..2271161 Burkholderia pseudomallei MSHR346 7888677 YP_002897005.1 CDS rumA NC_012695.1 2271256 2272713 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(2271256..2272713) Burkholderia pseudomallei MSHR346 7888096 YP_002897006.1 CDS GBP346_A2304 NC_012695.1 2272731 2273591 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 2272731..2273591 Burkholderia pseudomallei MSHR346 7888147 YP_002897007.1 CDS GBP346_A2305 NC_012695.1 2273780 2274556 R hypothetical protein complement(2273780..2274556) Burkholderia pseudomallei MSHR346 7889318 YP_002897008.1 CDS rpoS NC_012695.1 2274564 2275643 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS complement(2274564..2275643) Burkholderia pseudomallei MSHR346 7888418 YP_002897009.1 CDS GBP346_A2307 NC_012695.1 2275655 2276545 R identified by match to protein family HMM PF01476; match to protein family HMM PF01551; LysM domain/M23 peptidase domain protein complement(2275655..2276545) Burkholderia pseudomallei MSHR346 7890434 YP_002897010.1 CDS GBP346_A2308 NC_012695.1 2276557 2277525 R identified by match to protein family HMM PF01135; match to protein family HMM TIGR00080; protein-L-isoaspartate O-methyltransferase complement(2276557..2277525) Burkholderia pseudomallei MSHR346 7890931 YP_002897011.1 CDS surE NC_012695.1 2277522 2278283 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(2277522..2278283) Burkholderia pseudomallei MSHR346 7889129 YP_002897012.1 CDS GBP346_A2311 NC_012695.1 2278308 2278436 D identified by glimmer; putative; hypothetical protein 2278308..2278436 Burkholderia pseudomallei MSHR346 7888519 YP_002897013.1 CDS GBP346_A2310 NC_012695.1 2278388 2279593 R identified by match to protein family HMM PF02515; caib/baif family protein complement(2278388..2279593) Burkholderia pseudomallei MSHR346 7889388 YP_002897014.1 CDS recR NC_012695.1 2279663 2280265 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2279663..2280265) Burkholderia pseudomallei MSHR346 7887175 YP_002897015.1 CDS GBP346_A2313 NC_012695.1 2280297 2280623 R identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein complement(2280297..2280623) Burkholderia pseudomallei MSHR346 7889963 YP_002897016.1 CDS GBP346_A2314 NC_012695.1 2280718 2283195 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(2280718..2283195) Burkholderia pseudomallei MSHR346 7890478 YP_002897017.1 CDS GBP346_A2315 NC_012695.1 2283192 2283335 R hypothetical protein complement(2283192..2283335) Burkholderia pseudomallei MSHR346 7890101 YP_002897018.1 CDS trxA NC_012695.1 2283862 2284188 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 2283862..2284188 Burkholderia pseudomallei MSHR346 7887079 YP_002897019.1 CDS GBP346_A2318 NC_012695.1 2284195 2284320 D hypothetical protein 2284195..2284320 Burkholderia pseudomallei MSHR346 7887225 YP_002897020.1 CDS rho NC_012695.1 2284384 2285646 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2284384..2285646 Burkholderia pseudomallei MSHR346 7886933 YP_002897021.1 CDS GBP346_A2320 NC_012695.1 2285816 2286283 D identified by match to protein family HMM PF00376; transcriptional regulator, MerR family 2285816..2286283 Burkholderia pseudomallei MSHR346 7890371 YP_002897022.1 CDS GBP346_A2321 NC_012695.1 2286280 2287836 D identified by match to protein family HMM PF07690; transporter, major facilitator family 2286280..2287836 Burkholderia pseudomallei MSHR346 7890890 YP_002897023.1 CDS GBP346_A2322 NC_012695.1 2287879 2288724 D identified by match to protein family HMM PF06167; hypothetical protein 2287879..2288724 Burkholderia pseudomallei MSHR346 7888830 YP_002897024.1 CDS rpmE2 NC_012695.1 2288939 2289202 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 2288939..2289202 Burkholderia pseudomallei MSHR346 7890838 YP_002897025.1 CDS GBP346_A2324 NC_012695.1 2289355 2291172 D hypothetical protein 2289355..2291172 Burkholderia pseudomallei MSHR346 7889336 YP_002897026.1 CDS GBP346_A2325 NC_012695.1 2291176 2292531 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; mate efflux family protein 2291176..2292531 Burkholderia pseudomallei MSHR346 7887536 YP_002897027.1 CDS GBP346_A2326 NC_012695.1 2292683 2292889 D resuscitation promoting factor 2292683..2292889 Burkholderia pseudomallei MSHR346 7888041 YP_002897028.1 CDS GBP346_A2327 NC_012695.1 2292932 2293207 R identified by match to protein family HMM PF02627; 4-carboxymuconolactone decarboxylase family protein complement(2292932..2293207) Burkholderia pseudomallei MSHR346 7888156 YP_002897029.1 CDS GBP346_A2328 NC_012695.1 2293279 2293773 R identified by match to protein family HMM PF00376; match to protein family HMM PF09278; transcriptional regulator, MerR family complement(2293279..2293773) Burkholderia pseudomallei MSHR346 7890275 YP_002897030.1 CDS GBP346_A2329 NC_012695.1 2294129 2294737 D hypothetical protein 2294129..2294737 Burkholderia pseudomallei MSHR346 7890143 YP_002897031.1 CDS GBP346_A2330 NC_012695.1 2294816 2295238 D identified by match to protein family HMM PF06078; hypothetical protein 2294816..2295238 Burkholderia pseudomallei MSHR346 7887662 YP_002897032.1 CDS clpB NC_012695.1 2295465 2298062 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; ATP-dependent chaperone ClpB complement(2295465..2298062) Burkholderia pseudomallei MSHR346 7890951 YP_002897033.1 CDS GBP346_A2332 NC_012695.1 2298156 2298269 R hypothetical protein complement(2298156..2298269) Burkholderia pseudomallei MSHR346 7890454 YP_002897034.1 CDS GBP346_A2333 NC_012695.1 2298266 2298763 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; putative transcriptional regulator complement(2298266..2298763) Burkholderia pseudomallei MSHR346 7887537 YP_002897035.1 CDS GBP346_A2334 NC_012695.1 2298947 2299489 D identified by match to protein family HMM PF01152; globin 2298947..2299489 Burkholderia pseudomallei MSHR346 7890206 YP_002897036.1 CDS moaE NC_012695.1 2299817 2300305 R identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 complement(2299817..2300305) Burkholderia pseudomallei MSHR346 7886903 YP_002897037.1 CDS moaD NC_012695.1 2300316 2300573 R identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682; molybdopterin converting factor, subunit 1 complement(2300316..2300573) Burkholderia pseudomallei MSHR346 7890681 YP_002897038.1 CDS moeA NC_012695.1 2300595 2301887 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdenum cofactor biosynthesis protein MoeA complement(2300595..2301887) Burkholderia pseudomallei MSHR346 7887913 YP_002897039.1 CDS GBP346_A2338 NC_012695.1 2301863 2302654 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2301863..2302654) Burkholderia pseudomallei MSHR346 7887054 YP_002897040.1 CDS thrC NC_012695.1 2302664 2304115 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2302664..2304115) Burkholderia pseudomallei MSHR346 7887432 YP_002897041.1 CDS GBP346_A2340 NC_012695.1 2304123 2305451 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2304123..2305451) Burkholderia pseudomallei MSHR346 7888750 YP_002897042.1 CDS GBP346_A2341 NC_012695.1 2305496 2306734 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(2305496..2306734) Burkholderia pseudomallei MSHR346 7890766 YP_002897043.1 CDS GBP346_A2342 NC_012695.1 2307073 2307447 D identified by match to protein family HMM PF04430; hypothetical protein 2307073..2307447 Burkholderia pseudomallei MSHR346 7888506 YP_002897044.1 CDS GBP346_A2343 NC_012695.1 2307616 2309322 D identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 2307616..2309322 Burkholderia pseudomallei MSHR346 7889768 YP_002897045.1 CDS GBP346_A2344 NC_012695.1 2309343 2309714 D small multidrug resistance protein 2309343..2309714 Burkholderia pseudomallei MSHR346 7889725 YP_002897046.1 CDS GBP346_A2345 NC_012695.1 2309841 2310992 D identified by match to protein family HMM PF01041; match to protein family HMM PF01212; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2309841..2310992 Burkholderia pseudomallei MSHR346 7887741 YP_002897047.1 CDS GBP346_A2346 NC_012695.1 2310999 2312006 D identified by match to protein family HMM PF00535; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 2310999..2312006 Burkholderia pseudomallei MSHR346 7888433 YP_002897048.1 CDS arnA_1 NC_012695.1 2312003 2312950 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; putative formyltransferase 2312003..2312950 Burkholderia pseudomallei MSHR346 7888211 YP_002897049.1 CDS arnA_2 NC_012695.1 2312947 2314002 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 2312947..2314002 Burkholderia pseudomallei MSHR346 7886941 YP_002897050.1 CDS GBP346_A2349 NC_012695.1 2314016 2314912 D identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 2314016..2314912 Burkholderia pseudomallei MSHR346 7887517 YP_002897051.1 CDS GBP346_A2350 NC_012695.1 2315002 2315463 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; bacterioferritin comigratory protein 2315002..2315463 Burkholderia pseudomallei MSHR346 7890300 YP_002897052.1 CDS GBP346_A2351 NC_012695.1 2315657 2315911 R hypothetical protein complement(2315657..2315911) Burkholderia pseudomallei MSHR346 7888625 YP_002897053.1 CDS GBP346_A2352 NC_012695.1 2315954 2317588 D identified by match to protein family HMM PF02562; PhoH family protein 2315954..2317588 Burkholderia pseudomallei MSHR346 7888877 YP_002897054.1 CDS GBP346_A2353 NC_012695.1 2317593 2317781 D identified by glimmer; putative; hypothetical protein 2317593..2317781 Burkholderia pseudomallei MSHR346 7888356 YP_002897055.1 CDS GBP346_A2354 NC_012695.1 2317827 2319035 D identified by match to protein family HMM PF00877; lipoprotein, NLP/P60 family 2317827..2319035 Burkholderia pseudomallei MSHR346 7887705 YP_002897056.1 CDS GBP346_A2355 NC_012695.1 2319032 2319202 D identified by glimmer; putative; hypothetical protein 2319032..2319202 Burkholderia pseudomallei MSHR346 7888608 YP_002897057.1 CDS GBP346_A2356 NC_012695.1 2319270 2320280 R identified by match to protein family HMM PF01384; phosphate transporter family protein complement(2319270..2320280) Burkholderia pseudomallei MSHR346 7889497 YP_002897058.1 CDS GBP346_A2357 NC_012695.1 2320291 2320917 R identified by match to protein family HMM PF01865; phosphate transport regulator complement(2320291..2320917) Burkholderia pseudomallei MSHR346 7888517 YP_002897059.1 CDS dnaB NC_012695.1 2321056 2322438 R unwinds double stranded DNA; replicative DNA helicase complement(2321056..2322438) Burkholderia pseudomallei MSHR346 7886920 YP_002897060.1 CDS GBP346_A2359 NC_012695.1 2322448 2322576 R hypothetical protein complement(2322448..2322576) Burkholderia pseudomallei MSHR346 7890169 YP_002897061.1 CDS rplI NC_012695.1 2322582 2323034 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(2322582..2323034) Burkholderia pseudomallei MSHR346 7890592 YP_002897062.1 CDS rpsR NC_012695.1 2323062 2323337 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(2323062..2323337) Burkholderia pseudomallei MSHR346 7887069 YP_002897063.1 CDS GBP346_A2362 NC_012695.1 2323340 2323639 R primosomal replicatioN protein n complement(2323340..2323639) Burkholderia pseudomallei MSHR346 7887779 YP_002897064.1 CDS rpsF NC_012695.1 2323676 2324050 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(2323676..2324050) Burkholderia pseudomallei MSHR346 7889761 YP_002897065.1 CDS GBP346_A2364 NC_012695.1 2324286 2325296 R hypothetical protein complement(2324286..2325296) Burkholderia pseudomallei MSHR346 7887199 YP_002897066.1 CDS GBP346_A2365 NC_012695.1 2325286 2325993 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2325286..2325993) Burkholderia pseudomallei MSHR346 7889405 YP_002897067.1 CDS GBP346_A2366 NC_012695.1 2326008 2326136 D hypothetical protein 2326008..2326136 Burkholderia pseudomallei MSHR346 7887402 YP_002897068.1 CDS GBP346_A2367 NC_012695.1 2326199 2327119 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; Ser/Thr protein phosphatase family protein 2326199..2327119 Burkholderia pseudomallei MSHR346 7890381 YP_002897069.1 CDS GBP346_A2368 NC_012695.1 2327130 2327555 D identified by match to protein family HMM PF00116; cytochrome c oxidase family protein 2327130..2327555 Burkholderia pseudomallei MSHR346 7889468 YP_002897070.1 CDS GBP346_A2369 NC_012695.1 2327692 2328603 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(2327692..2328603) Burkholderia pseudomallei MSHR346 7888078 YP_002897071.1 CDS gcl NC_012695.1 2328765 2330540 D catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 2328765..2330540 Burkholderia pseudomallei MSHR346 7887170 YP_002897072.1 CDS hyi NC_012695.1 2330657 2331445 D identified by match to protein family HMM PF01261; match to protein family HMM TIGR03234; hydroxypyruvate isomerase 2330657..2331445 Burkholderia pseudomallei MSHR346 7890583 YP_002897073.1 CDS GBP346_A2372 NC_012695.1 2331543 2332448 D identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505; 2-hydroxy-3-oxopropionate reductase 2331543..2332448 Burkholderia pseudomallei MSHR346 7886987 YP_002897074.1 CDS GBP346_A2373 NC_012695.1 2332530 2333168 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2332530..2333168 Burkholderia pseudomallei MSHR346 7889996 YP_002897075.1 CDS GBP346_A2375 NC_012695.1 2333181 2333651 D identified by match to protein family HMM PF01476; LysM domain/BON superfamily protein 2333181..2333651 Burkholderia pseudomallei MSHR346 7890410 YP_002897076.1 CDS GBP346_A2374 NC_012695.1 2333612 2333830 R hypothetical protein complement(2333612..2333830) Burkholderia pseudomallei MSHR346 7888357 YP_002897077.1 CDS GBP346_A2376 NC_012695.1 2333827 2334870 R identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase (L-asparagine amidohydrolase) (L-ASNase) complement(2333827..2334870) Burkholderia pseudomallei MSHR346 7887190 YP_002897078.1 CDS GBP346_A2377 NC_012695.1 2334847 2335371 D hypothetical protein 2334847..2335371 Burkholderia pseudomallei MSHR346 7890212 YP_002897079.1 CDS GBP346_A2378 NC_012695.1 2335368 2335658 D identified by match to protein family HMM PF07769; phosphate starvation-inducible protein PsiF 2335368..2335658 Burkholderia pseudomallei MSHR346 7890580 YP_002897080.1 CDS GBP346_A2380 NC_012695.1 2335865 2336344 D hypothetical protein 2335865..2336344 Burkholderia pseudomallei MSHR346 7888060 YP_002897081.1 CDS GBP346_A2379 NC_012695.1 2336338 2336481 R hypothetical protein complement(2336338..2336481) Burkholderia pseudomallei MSHR346 7889701 YP_002897082.1 CDS GBP346_A2381 NC_012695.1 2336582 2337169 D putative lipoprotein 2336582..2337169 Burkholderia pseudomallei MSHR346 7887177 YP_002897083.1 CDS GBP346_A2382 NC_012695.1 2337378 2338442 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family complement(2337378..2338442) Burkholderia pseudomallei MSHR346 7890345 YP_002897084.1 CDS GBP346_A2383 NC_012695.1 2338819 2339997 R SMC domain protein complement(2338819..2339997) Burkholderia pseudomallei MSHR346 7887608 YP_002897085.1 CDS GBP346_A2384 NC_012695.1 2340250 2341437 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(2340250..2341437) Burkholderia pseudomallei MSHR346 7887472 YP_002897086.1 CDS GBP346_A2385 NC_012695.1 2341504 2341857 R hypothetical protein complement(2341504..2341857) Burkholderia pseudomallei MSHR346 7889676 YP_002897087.1 CDS GBP346_A2386 NC_012695.1 2341931 2342653 R identified by match to protein family HMM PF00023; ankyrin repeat protein complement(2341931..2342653) Burkholderia pseudomallei MSHR346 7887971 YP_002897088.1 CDS GBP346_A2387 NC_012695.1 2342664 2343473 R identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; hydrolase, TatD family complement(2342664..2343473) Burkholderia pseudomallei MSHR346 7888440 YP_002897089.1 CDS GBP346_A2388 NC_012695.1 2343549 2344055 R identified by match to protein family HMM PF00583; phosphinothricin acetyltransferase complement(2343549..2344055) Burkholderia pseudomallei MSHR346 7887630 YP_002897090.1 CDS GBP346_A2389 NC_012695.1 2344098 2345132 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(2344098..2345132) Burkholderia pseudomallei MSHR346 7886906 YP_002897091.1 CDS tmk NC_012695.1 2345152 2345772 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2345152..2345772) Burkholderia pseudomallei MSHR346 7888350 YP_002897092.1 CDS GBP346_A2391 NC_012695.1 2345773 2346792 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; aminodeoxychorismate lyase complement(2345773..2346792) Burkholderia pseudomallei MSHR346 7888452 YP_002897093.1 CDS GBP346_A2392 NC_012695.1 2346871 2347917 D identified by match to protein family HMM TIGR03317; glycine cleavage T-protein 2346871..2347917 Burkholderia pseudomallei MSHR346 7887214 YP_002897094.1 CDS GBP346_A2393 NC_012695.1 2347988 2348839 D identified by match to protein family HMM PF05742; hypothetical protein 2347988..2348839 Burkholderia pseudomallei MSHR346 7887847 YP_002897095.1 CDS GBP346_A2394 NC_012695.1 2348875 2349315 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(2348875..2349315) Burkholderia pseudomallei MSHR346 7890060 YP_002897096.1 CDS GBP346_A2395 NC_012695.1 2349687 2350646 R identified by match to protein family HMM PF07859; thermophilic carboxylesterase Est2 complement(2349687..2350646) Burkholderia pseudomallei MSHR346 7890471 YP_002897097.1 CDS GBP346_A2396 NC_012695.1 2350752 2351750 R identified by match to protein family HMM PF00107; putative NADP-dependent oxidoreductase yncb complement(2350752..2351750) Burkholderia pseudomallei MSHR346 7889139 YP_002897098.1 CDS GBP346_A2397 NC_012695.1 2351842 2352324 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase superfamily protein complement(2351842..2352324) Burkholderia pseudomallei MSHR346 7887255 YP_002897099.1 CDS GBP346_A2398 NC_012695.1 2352321 2352635 R identified by match to protein family HMM PF03992; match to protein family HMM PF07876; stress responsive A/B barrel domain protein complement(2352321..2352635) Burkholderia pseudomallei MSHR346 7890938 YP_002897100.1 CDS GBP346_A2399 NC_012695.1 2353042 2353299 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2353042..2353299) Burkholderia pseudomallei MSHR346 7888640 YP_002897101.1 CDS GBP346_A2400 NC_012695.1 2353389 2353853 D hypothetical protein 2353389..2353853 Burkholderia pseudomallei MSHR346 7890223 YP_002897102.1 CDS GBP346_A2401 NC_012695.1 2354218 2355396 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2354218..2355396) Burkholderia pseudomallei MSHR346 7889396 YP_002897103.1 CDS GBP346_A2402 NC_012695.1 2355455 2356093 R identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase complement(2355455..2356093) Burkholderia pseudomallei MSHR346 7890789 YP_002897104.1 CDS GBP346_A2403 NC_012695.1 2356135 2358219 R identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; peroxisomal bifunctional enzyme complement(2356135..2358219) Burkholderia pseudomallei MSHR346 7889086 YP_002897105.1 CDS GBP346_A2404 NC_012695.1 2358275 2358394 R hypothetical protein complement(2358275..2358394) Burkholderia pseudomallei MSHR346 7887809 YP_002897106.1 CDS GBP346_A2405 NC_012695.1 2358471 2360111 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(2358471..2360111) Burkholderia pseudomallei MSHR346 7888421 YP_002897107.1 CDS GBP346_A2406 NC_012695.1 2360227 2361804 D identified by match to protein family HMM PF02696; hypothetical protein 2360227..2361804 Burkholderia pseudomallei MSHR346 7887339 YP_002897108.1 CDS msrB NC_012695.1 2361801 2362286 D identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2361801..2362286 Burkholderia pseudomallei MSHR346 7890550 YP_002897109.1 CDS ispZ NC_012695.1 2362379 2362909 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2362379..2362909 Burkholderia pseudomallei MSHR346 7889959 YP_002897110.1 CDS GBP346_A2409 NC_012695.1 2362906 2363226 D identified by match to protein family HMM PF01722; BolA/YrbA family protein 2362906..2363226 Burkholderia pseudomallei MSHR346 7887615 YP_002897111.1 CDS GBP346_A2410 NC_012695.1 2363251 2364030 D identified by match to protein family HMM PF00639; PpiC-type peptidyl-prolyl cis-trans isomerase 2363251..2364030 Burkholderia pseudomallei MSHR346 7888967 YP_002897112.1 CDS GBP346_A2411 NC_012695.1 2364128 2364661 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(2364128..2364661) Burkholderia pseudomallei MSHR346 7890216 YP_002897113.1 CDS purL NC_012695.1 2364666 2368736 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(2364666..2368736) Burkholderia pseudomallei MSHR346 7889118 YP_002897114.1 CDS GBP346_A2413 NC_012695.1 2368907 2369020 R hypothetical protein complement(2368907..2369020) Burkholderia pseudomallei MSHR346 7888930 YP_002897115.1 CDS GBP346_A2414 NC_012695.1 2368992 2370296 D identified by match to protein family HMM PF01266; D-amino-acid dehydrogenase 2368992..2370296 Burkholderia pseudomallei MSHR346 7889910 YP_002897116.1 CDS GBP346_A2416 NC_012695.1 2370344 2371939 D identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; nitric-oxide reductase subunit C 2370344..2371939 Burkholderia pseudomallei MSHR346 7888036 YP_002897117.1 CDS GBP346_A2415 NC_012695.1 2371931 2372086 R hypothetical protein complement(2371931..2372086) Burkholderia pseudomallei MSHR346 7890783 YP_002897118.1 CDS pgi NC_012695.1 2372042 2373664 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2372042..2373664 Burkholderia pseudomallei MSHR346 7887359 YP_002897119.1 CDS GBP346_A2418 NC_012695.1 2373957 2374682 R identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein LolD complement(2373957..2374682) Burkholderia pseudomallei MSHR346 7887675 YP_002897120.1 CDS GBP346_A2419 NC_012695.1 2374666 2375346 D identified by match to protein family HMM PF00657; putative acyl-CoA thioesterase 2374666..2375346 Burkholderia pseudomallei MSHR346 7890152 YP_002897121.1 CDS GBP346_A2420 NC_012695.1 2375373 2375549 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2375373..2375549) Burkholderia pseudomallei MSHR346 7888448 YP_002897122.1 CDS GBP346_A2421 NC_012695.1 2375726 2377660 R identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase D complement(2375726..2377660) Burkholderia pseudomallei MSHR346 7890926 YP_002897123.1 CDS GBP346_A2423 NC_012695.1 2378391 2378519 R hypothetical protein complement(2378391..2378519) Burkholderia pseudomallei MSHR346 7889189 YP_002897124.1 CDS GBP346_A2424 NC_012695.1 2378522 2378773 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 4-carboxymuconolactone decarboxylase domain protein complement(2378522..2378773) Burkholderia pseudomallei MSHR346 7888905 YP_002897125.1 CDS GBP346_A2425 NC_012695.1 2378932 2379168 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2378932..2379168 Burkholderia pseudomallei MSHR346 7887991 YP_002897126.1 CDS GBP346_A2426 NC_012695.1 2379255 2379452 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2379255..2379452) Burkholderia pseudomallei MSHR346 7888689 YP_002897127.1 CDS GBP346_A2427 NC_012695.1 2379456 2379587 R hypothetical protein complement(2379456..2379587) Burkholderia pseudomallei MSHR346 7889680 YP_002897128.1 CDS GBP346_A2428 NC_012695.1 2379717 2380211 R hypothetical protein complement(2379717..2380211) Burkholderia pseudomallei MSHR346 7889885 YP_002897129.1 CDS GBP346_A2429 NC_012695.1 2380594 2380923 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; RedA 2380594..2380923 Burkholderia pseudomallei MSHR346 7887715 YP_002897130.1 CDS GBP346_A2431 NC_012695.1 2381436 2381597 R hypothetical protein complement(2381436..2381597) Burkholderia pseudomallei MSHR346 7889199 YP_002897131.1 CDS GBP346_A2432 NC_012695.1 2381727 2381873 R hypothetical protein complement(2381727..2381873) Burkholderia pseudomallei MSHR346 7886734 YP_002897132.1 CDS lon NC_012695.1 2381954 2384371 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; endopeptidase LA complement(2381954..2384371) Burkholderia pseudomallei MSHR346 7888619 YP_002897133.1 CDS GBP346_A2434 NC_012695.1 2384393 2384560 R identified by glimmer; putative; hypothetical protein complement(2384393..2384560) Burkholderia pseudomallei MSHR346 7889967 YP_002897134.1 CDS clpX NC_012695.1 2384567 2385838 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2384567..2385838) Burkholderia pseudomallei MSHR346 7887271 YP_002897135.1 CDS clpP NC_012695.1 2385999 2386652 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(2385999..2386652) Burkholderia pseudomallei MSHR346 7887766 YP_002897136.1 CDS tig NC_012695.1 2386787 2388136 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(2386787..2388136) Burkholderia pseudomallei MSHR346 7890319 YP_002897137.1 CDS GBP346_A2438 NC_012695.1 2388185 2388472 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; glycerate kinase 1 2388185..2388472 Burkholderia pseudomallei MSHR346 7890133 YP_002897138.1 CDS GBP346_A2439 NC_012695.1 2388589 2389752 D identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2388589..2389752 Burkholderia pseudomallei MSHR346 7886809 YP_002897139.1 CDS GBP346_A2440 NC_012695.1 2389855 2390304 D identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 2389855..2390304 Burkholderia pseudomallei MSHR346 7890716 YP_002897140.1 CDS GBP346_A2441 NC_012695.1 2390339 2390695 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2390339..2390695) Burkholderia pseudomallei MSHR346 7889130 YP_002897141.1 CDS panE_3 NC_012695.1 2390692 2391681 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(2390692..2391681) Burkholderia pseudomallei MSHR346 7888572 YP_002897142.1 CDS GBP346_A2443 NC_012695.1 2391765 2392910 R identified by match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; transcriptional regulator, LuxR family complement(2391765..2392910) Burkholderia pseudomallei MSHR346 7890876 YP_002897143.1 CDS GBP346_A2444 NC_012695.1 2393244 2394311 D identified by match to protein family HMM PF00267; gram-negative porin 2393244..2394311 Burkholderia pseudomallei MSHR346 7888643 YP_002897144.1 CDS GBP346_A2445 NC_012695.1 2394335 2395528 D identified by match to protein family HMM PF07690; major facilitator family transporter 2394335..2395528 Burkholderia pseudomallei MSHR346 7888110 YP_002897145.1 CDS GBP346_A2446 NC_012695.1 2395585 2396694 D identified by match to protein family HMM PF00850; histone deacetylase family protein 2395585..2396694 Burkholderia pseudomallei MSHR346 7887746 YP_002897146.1 CDS GBP346_A2447 NC_012695.1 2396889 2397512 D phospholipase D (PLD) family protein 2396889..2397512 Burkholderia pseudomallei MSHR346 7887443 YP_002897147.1 CDS GBP346_A2448 NC_012695.1 2397639 2397821 R hypothetical protein complement(2397639..2397821) Burkholderia pseudomallei MSHR346 7890491 YP_002897148.1 CDS GBP346_A2449 NC_012695.1 2399027 2399221 D putative exported avidin family protein 2399027..2399221 Burkholderia pseudomallei MSHR346 7889875 YP_002897149.1 CDS GBP346_A2450 NC_012695.1 2399282 2399530 D hypothetical protein 2399282..2399530 Burkholderia pseudomallei MSHR346 7888511 YP_002897150.1 CDS GBP346_A2451 NC_012695.1 2399566 2399694 R DNA adenine methylase complement(2399566..2399694) Burkholderia pseudomallei MSHR346 7888638 YP_002897151.1 CDS GBP346_A2452 NC_012695.1 2400723 2401145 D identified by match to protein family HMM PF05488; PAAR motif protein 2400723..2401145 Burkholderia pseudomallei MSHR346 7889744 YP_002897152.1 CDS GBP346_A2453 NC_012695.1 2401142 2401648 D hypothetical protein 2401142..2401648 Burkholderia pseudomallei MSHR346 7887593 YP_002897153.1 CDS GBP346_A2454 NC_012695.1 2401665 2402114 D hypothetical protein 2401665..2402114 Burkholderia pseudomallei MSHR346 7888430 YP_002897154.1 CDS GBP346_A2455 NC_012695.1 2402446 2402592 D hypothetical protein 2402446..2402592 Burkholderia pseudomallei MSHR346 7890911 YP_002897155.1 CDS GBP346_A2456 NC_012695.1 2402599 2403324 D hypothetical protein 2402599..2403324 Burkholderia pseudomallei MSHR346 7888564 YP_002897156.1 CDS GBP346_A2457 NC_012695.1 2403345 2403467 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2403345..2403467) Burkholderia pseudomallei MSHR346 7888129 YP_002897157.1 CDS GBP346_A2458 NC_012695.1 2403514 2403825 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; gp27 complement(2403514..2403825) Burkholderia pseudomallei MSHR346 7887135 YP_002897158.1 CDS hpnD_1 NC_012695.1 2404344 2405186 D identified by match to protein family HMM PF00494; match to protein family HMM TIGR03465; squalene synthase HpnD 2404344..2405186 Burkholderia pseudomallei MSHR346 7889179 YP_002897159.1 CDS GBP346_A2461 NC_012695.1 2405227 2406501 R identified by match to protein family HMM PF07394; match to protein family HMM TIGR01409; twin-arginine translocation pathway signal sequence domain protein complement(2405227..2406501) Burkholderia pseudomallei MSHR346 7890013 YP_002897160.1 CDS GBP346_A2462 NC_012695.1 2406563 2408026 R identified by match to protein family HMM PF08811; DNA-directed DNA polymerase B complement(2406563..2408026) Burkholderia pseudomallei MSHR346 7886744 YP_002897161.1 CDS GBP346_A2463 NC_012695.1 2408222 2408512 R hypothetical protein complement(2408222..2408512) Burkholderia pseudomallei MSHR346 7888438 YP_002897162.1 CDS GBP346_A2464 NC_012695.1 2408512 2408694 R hypothetical protein complement(2408512..2408694) Burkholderia pseudomallei MSHR346 7889351 YP_002897163.1 CDS ompR NC_012695.1 2408773 2409507 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2408773..2409507 Burkholderia pseudomallei MSHR346 7889123 YP_002897164.1 CDS GBP346_A2466 NC_012695.1 2409595 2410932 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; RisS protein 2409595..2410932 Burkholderia pseudomallei MSHR346 7889930 YP_002897165.1 CDS GBP346_A2467 NC_012695.1 2411131 2411679 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/Tsa family 2411131..2411679 Burkholderia pseudomallei MSHR346 7888351 YP_002897166.1 CDS GBP346_A2468 NC_012695.1 2411757 2412284 D identified by match to protein family HMM PF02627; alkyl hydroperoxide reductase D 2411757..2412284 Burkholderia pseudomallei MSHR346 7889277 YP_002897167.1 CDS ispF NC_012695.1 2412645 2413133 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2412645..2413133) Burkholderia pseudomallei MSHR346 7889804 YP_002897168.1 CDS ispD NC_012695.1 2413174 2413884 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2413174..2413884) Burkholderia pseudomallei MSHR346 7890530 YP_002897169.1 CDS mfd NC_012695.1 2413905 2417474 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 2413905..2417474 Burkholderia pseudomallei MSHR346 7890578 YP_002897170.1 CDS GBP346_A2472 NC_012695.1 2417973 2418269 R hypothetical protein complement(2417973..2418269) Burkholderia pseudomallei MSHR346 7889483 YP_002897171.1 CDS argE NC_012695.1 2418571 2419788 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2418571..2419788 Burkholderia pseudomallei MSHR346 7889044 YP_002897172.1 CDS GBP346_A2474 NC_012695.1 2419850 2420881 D identified by match to protein family HMM PF00291; phenylserine dehydratase 2419850..2420881 Burkholderia pseudomallei MSHR346 7889818 YP_002897173.1 CDS GBP346_A2475 NC_012695.1 2421074 2421325 R hypothetical protein complement(2421074..2421325) Burkholderia pseudomallei MSHR346 7888536 YP_002897174.1 CDS GBP346_A2476 NC_012695.1 2421341 2421796 D hypothetical protein 2421341..2421796 Burkholderia pseudomallei MSHR346 7886891 YP_002897175.1 CDS GBP346_A2477 NC_012695.1 2421816 2422073 R lipid A biosynthesis acyltransferase complement(2421816..2422073) Burkholderia pseudomallei MSHR346 7888778 YP_002897176.1 CDS GBP346_A2478 NC_012695.1 2422089 2422217 R hypothetical protein complement(2422089..2422217) Burkholderia pseudomallei MSHR346 7890738 YP_002897177.1 CDS GBP346_A2479 NC_012695.1 2422350 2424908 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A complement(2422350..2424908) Burkholderia pseudomallei MSHR346 7888508 YP_002897178.1 CDS GBP346_A2480 NC_012695.1 2424933 2425118 D hypothetical protein 2424933..2425118 Burkholderia pseudomallei MSHR346 7887452 YP_002897179.1 CDS GBP346_A2481 NC_012695.1 2425179 2425298 D identified by glimmer; putative; hypothetical protein 2425179..2425298 Burkholderia pseudomallei MSHR346 7888328 YP_002897180.1 CDS GBP346_A2482 NC_012695.1 2425388 2426068 D identified by match to protein family HMM PF04012; PspA/IM30 family protein 2425388..2426068 Burkholderia pseudomallei MSHR346 7890949 YP_002897181.1 CDS GBP346_A2483 NC_012695.1 2426213 2427400 D identified by match to protein family HMM PF07719; tetratricopeptide repeat protein 2426213..2427400 Burkholderia pseudomallei MSHR346 7887012 YP_002897182.1 CDS mscL NC_012695.1 2427584 2428015 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2427584..2428015 Burkholderia pseudomallei MSHR346 7887947 YP_002897183.1 CDS GBP346_A2485 NC_012695.1 2428093 2428218 D identified by glimmer; putative; hypothetical protein 2428093..2428218 Burkholderia pseudomallei MSHR346 7888412 YP_002897184.1 CDS GBP346_A2486 NC_012695.1 2428381 2428824 D hypothetical protein 2428381..2428824 Burkholderia pseudomallei MSHR346 7889552 YP_002897185.1 CDS GBP346_A2487 NC_012695.1 2429005 2429943 R identified by match to protein family HMM PF03446; oxidoreductase complement(2429005..2429943) Burkholderia pseudomallei MSHR346 7889656 YP_002897186.1 CDS GBP346_A2488 NC_012695.1 2430036 2430245 D identified by match to protein family HMM PF07311; hypothetical protein 2430036..2430245 Burkholderia pseudomallei MSHR346 7888858 YP_002897187.1 CDS GBP346_A2489 NC_012695.1 2430359 2430529 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2430359..2430529) Burkholderia pseudomallei MSHR346 7890650 YP_002897188.1 CDS GBP346_A2490 NC_012695.1 2430987 2431916 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2430987..2431916 Burkholderia pseudomallei MSHR346 7886939 YP_002897189.1 CDS GBP346_A2491 NC_012695.1 2432258 2433760 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(2432258..2433760) Burkholderia pseudomallei MSHR346 7888169 YP_002897190.1 CDS GBP346_A2492 NC_012695.1 2433882 2434010 R hypothetical protein complement(2433882..2434010) Burkholderia pseudomallei MSHR346 7890009 YP_002897191.1 CDS GBP346_A2493 NC_012695.1 2434057 2434170 D hypothetical protein 2434057..2434170 Burkholderia pseudomallei MSHR346 7890107 YP_002897192.1 CDS uraH NC_012695.1 2434254 2434607 D identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962; hydroxyisourate hydrolase 2434254..2434607 Burkholderia pseudomallei MSHR346 7888633 YP_002897193.1 CDS GBP346_A2495 NC_012695.1 2434657 2435859 D identified by match to protein family HMM PF06181; hypothetical protein 2434657..2435859 Burkholderia pseudomallei MSHR346 7889984 YP_002897194.1 CDS GBP346_A2496 NC_012695.1 2435917 2436084 D hypothetical protein 2435917..2436084 Burkholderia pseudomallei MSHR346 7889292 YP_002897195.1 CDS allA_1 NC_012695.1 2436764 2437276 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2436764..2437276) Burkholderia pseudomallei MSHR346 7888166 YP_002897196.1 CDS allC NC_012695.1 2437273 2438427 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(2437273..2438427) Burkholderia pseudomallei MSHR346 7887192 YP_002897197.1 CDS uraD NC_012695.1 2438515 2439039 R identified by match to protein family HMM PF09349; match to protein family HMM TIGR03164; ohcu decarboxylase complement(2438515..2439039) Burkholderia pseudomallei MSHR346 7888132 YP_002897198.1 CDS GBP346_A2500 NC_012695.1 2439036 2439989 R identified by match to protein family HMM PF01522; match to protein family HMM TIGR03212; putative urate catabolism protein complement(2439036..2439989) Burkholderia pseudomallei MSHR346 7888029 YP_002897199.1 CDS GBP346_A2501 NC_012695.1 2440135 2441091 R identified by match to protein family HMM PF01177; hydantoin racemase complement(2440135..2441091) Burkholderia pseudomallei MSHR346 7888871 YP_002897200.1 CDS GBP346_A2502 NC_012695.1 2441102 2442592 R identified by match to protein family HMM PF02133; NCS1 nucleoside transporter family protein complement(2441102..2442592) Burkholderia pseudomallei MSHR346 7887607 YP_002897201.1 CDS GBP346_A2503 NC_012695.1 2442591 2442722 D hypothetical protein 2442591..2442722 Burkholderia pseudomallei MSHR346 7890859 YP_002897202.1 CDS GBP346_A2504 NC_012695.1 2442747 2443442 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family complement(2442747..2443442) Burkholderia pseudomallei MSHR346 7888732 YP_002897203.1 CDS ldcA NC_012695.1 2443765 2444706 R catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A complement(2443765..2444706) Burkholderia pseudomallei MSHR346 7886969 YP_002897204.1 CDS GBP346_A2506 NC_012695.1 2444762 2445358 R identified by match to protein family HMM PF00383; tRNA-specific adenosine deaminase complement(2444762..2445358) Burkholderia pseudomallei MSHR346 7888466 YP_002897205.1 CDS GBP346_A2507 NC_012695.1 2445355 2445756 R identified by match to protein family HMM PF09350; hypothetical protein complement(2445355..2445756) Burkholderia pseudomallei MSHR346 7887962 YP_002897206.1 CDS GBP346_A2508 NC_012695.1 2446081 2446236 R hypothetical protein complement(2446081..2446236) Burkholderia pseudomallei MSHR346 7890442 YP_002897207.1 CDS GBP346_A2509 NC_012695.1 2446238 2446486 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2446238..2446486) Burkholderia pseudomallei MSHR346 7889131 YP_002897208.1 CDS GBP346_A2510 NC_012695.1 2446558 2447064 R identified by match to protein family HMM PF09351; helix-turn-helix- domain containing protein AraC type complement(2446558..2447064) Burkholderia pseudomallei MSHR346 7887833 YP_002897209.1 CDS GBP346_A2511 NC_012695.1 2447432 2448652 D identified by match to protein family HMM PF07690; major facilitator family transporter 2447432..2448652 Burkholderia pseudomallei MSHR346 7889924 YP_002897210.1 CDS GBP346_A2512 NC_012695.1 2448661 2448840 D hypothetical protein 2448661..2448840 Burkholderia pseudomallei MSHR346 7886795 YP_002897211.1 CDS GBP346_A2513 NC_012695.1 2449015 2449170 R hypothetical protein complement(2449015..2449170) Burkholderia pseudomallei MSHR346 7887335 YP_002897212.1 CDS GBP346_A2514 NC_012695.1 2449602 2449778 R hypothetical protein complement(2449602..2449778) Burkholderia pseudomallei MSHR346 7889298 YP_002897213.1 CDS GBP346_A2515 NC_012695.1 2450324 2451559 R hypothetical protein complement(2450324..2451559) Burkholderia pseudomallei MSHR346 7887717 YP_002897214.1 CDS GBP346_A2516 NC_012695.1 2451562 2454372 R identified by match to protein family HMM PF02463; SMC domain protein complement(2451562..2454372) Burkholderia pseudomallei MSHR346 7890808 YP_002897215.1 CDS GBP346_A2517 NC_012695.1 2454372 2455055 R hypothetical protein complement(2454372..2455055) Burkholderia pseudomallei MSHR346 7888258 YP_002897216.1 CDS GBP346_A2519 NC_012695.1 2455039 2456373 R hypothetical protein complement(2455039..2456373) Burkholderia pseudomallei MSHR346 7889505 YP_002897217.1 CDS GBP346_A2520 NC_012695.1 2456485 2456646 R hypothetical protein complement(2456485..2456646) Burkholderia pseudomallei MSHR346 7890522 YP_002897218.1 CDS GBP346_A2521 NC_012695.1 2457427 2457540 D identified by glimmer; putative; hypothetical protein 2457427..2457540 Burkholderia pseudomallei MSHR346 7887324 YP_002897219.1 CDS GBP346_A2522 NC_012695.1 2457491 2457931 D adenosylhomocysteinase 2457491..2457931 Burkholderia pseudomallei MSHR346 7889245 YP_002897220.1 CDS GBP346_A2523 NC_012695.1 2457909 2458835 D identified by match to protein family HMM PF08843; hypothetical protein 2457909..2458835 Burkholderia pseudomallei MSHR346 7886848 YP_002897221.1 CDS GBP346_A2524 NC_012695.1 2458851 2459030 D hypothetical protein 2458851..2459030 Burkholderia pseudomallei MSHR346 7886845 YP_002897222.1 CDS guaA NC_012695.1 2459742 2461361 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2459742..2461361) Burkholderia pseudomallei MSHR346 7887262 YP_002897223.1 CDS GBP346_A2526 NC_012695.1 2461343 2461492 R hypothetical protein complement(2461343..2461492) Burkholderia pseudomallei MSHR346 7889541 YP_002897224.1 CDS GBP346_A2527 NC_012695.1 2461489 2462142 R hypothetical protein complement(2461489..2462142) Burkholderia pseudomallei MSHR346 7887057 YP_002897225.1 CDS guaB NC_012695.1 2462149 2463609 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(2462149..2463609) Burkholderia pseudomallei MSHR346 7889327 YP_002897226.1 CDS GBP346_A2529 NC_012695.1 2463661 2464011 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2463661..2464011) Burkholderia pseudomallei MSHR346 7889377 YP_002897227.1 CDS GBP346_A2530 NC_012695.1 2464026 2464790 R identified by match to protein family HMM PF05988; hypothetical protein complement(2464026..2464790) Burkholderia pseudomallei MSHR346 7887163 YP_002897228.1 CDS GBP346_A2531 NC_012695.1 2464927 2466147 D TPR repeat protein 2464927..2466147 Burkholderia pseudomallei MSHR346 7888098 YP_002897229.1 CDS GBP346_A2532 NC_012695.1 2466179 2466862 D hypothetical protein 2466179..2466862 Burkholderia pseudomallei MSHR346 7888028 YP_002897230.1 CDS GBP346_A2533 NC_012695.1 2467197 2468165 D integral membrane protein 2467197..2468165 Burkholderia pseudomallei MSHR346 7889028 YP_002897231.1 CDS GBP346_A2534 NC_012695.1 2468324 2468647 R identified by match to protein family HMM PF03658; protein RnfH complement(2468324..2468647) Burkholderia pseudomallei MSHR346 7886916 YP_002897232.1 CDS GBP346_A2535 NC_012695.1 2468653 2469123 R identified by match to protein family HMM PF03364; cyclase/dehydrase superfamily complement(2468653..2469123) Burkholderia pseudomallei MSHR346 7890186 YP_002897233.1 CDS GBP346_A2536 NC_012695.1 2469055 2469207 D hypothetical protein 2469055..2469207 Burkholderia pseudomallei MSHR346 7888845 YP_002897234.1 CDS smpB NC_012695.1 2469188 2469634 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2469188..2469634 Burkholderia pseudomallei MSHR346 7888522 YP_002897235.1 CDS GBP346_A2538 NC_012695.1 2469812 2470759 R identified by match to protein family HMM PF01145; spfh domain/band 7 family protein complement(2469812..2470759) Burkholderia pseudomallei MSHR346 7887922 YP_002897236.1 CDS GBP346_A2539 NC_012695.1 2470839 2471273 R identified by match to protein family HMM PF01957; NfeD family protein complement(2470839..2471273) Burkholderia pseudomallei MSHR346 7888301 YP_002897237.1 CDS ppsA NC_012695.1 2471401 2473800 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2471401..2473800) Burkholderia pseudomallei MSHR346 7889272 YP_002897238.1 CDS GBP346_A2541 NC_012695.1 2473815 2474369 D hypothetical protein 2473815..2474369 Burkholderia pseudomallei MSHR346 7889809 YP_002897239.1 CDS GBP346_A2542 NC_012695.1 2474545 2475594 R identified by match to protein family HMM PF05023; putative phytochelatin synthase complement(2474545..2475594) Burkholderia pseudomallei MSHR346 7890533 YP_002897240.1 CDS GBP346_A2543 NC_012695.1 2475627 2477513 R identified by match to protein family HMM PF00082; match to protein family HMM PF09286; serine protease, subtilase family complement(2475627..2477513) Burkholderia pseudomallei MSHR346 7890569 YP_002897241.1 CDS GBP346_A2544 NC_012695.1 2477917 2478039 R hypothetical protein complement(2477917..2478039) Burkholderia pseudomallei MSHR346 7889477 YP_002897242.1 CDS GBP346_A2545 NC_012695.1 2478063 2478878 D identified by match to protein family HMM PF03618; hypothetical protein 2478063..2478878 Burkholderia pseudomallei MSHR346 7889038 YP_002897243.1 CDS GBP346_A2546 NC_012695.1 2479080 2479868 R identified by match to protein family HMM PF00588; RNA methyltransferase, TrmH family complement(2479080..2479868) Burkholderia pseudomallei MSHR346 7889820 YP_002897244.1 CDS rnhB NC_012695.1 2479865 2480509 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2479865..2480509) Burkholderia pseudomallei MSHR346 7890818 YP_002897245.1 CDS lpxB NC_012695.1 2480509 2481675 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(2480509..2481675) Burkholderia pseudomallei MSHR346 7890250 YP_002897246.1 CDS lpxA NC_012695.1 2481679 2482467 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2481679..2482467) Burkholderia pseudomallei MSHR346 7890129 YP_002897247.1 CDS fabZ NC_012695.1 2482523 2482990 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2482523..2482990) Burkholderia pseudomallei MSHR346 7887068 YP_002897248.1 CDS lpxD NC_012695.1 2483136 2484221 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2483136..2484221) Burkholderia pseudomallei MSHR346 7886719 YP_002897249.1 CDS GBP346_A2552 NC_012695.1 2484238 2484744 R identified by match to protein family HMM PF03938; outer membrane protein complement(2484238..2484744) Burkholderia pseudomallei MSHR346 7889391 YP_002897250.1 CDS yaeT NC_012695.1 2484809 2487118 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303; outer membrane protein assembly complex, YaeT protein complement(2484809..2487118) Burkholderia pseudomallei MSHR346 7888808 YP_002897251.1 CDS GBP346_A2555 NC_012695.1 2487101 2487214 D hypothetical protein 2487101..2487214 Burkholderia pseudomallei MSHR346 7887117 YP_002897252.1 CDS rseP NC_012695.1 2487183 2488574 R identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; RIP metalloprotease RseP complement(2487183..2488574) Burkholderia pseudomallei MSHR346 7887821 YP_002897253.1 CDS dxr NC_012695.1 2488592 2489788 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2488592..2489788) Burkholderia pseudomallei MSHR346 7890311 YP_002897254.1 CDS cdsA NC_012695.1 2489803 2490624 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(2489803..2490624) Burkholderia pseudomallei MSHR346 7887807 YP_002897255.1 CDS uppS NC_012695.1 2490618 2491400 R identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase complement(2490618..2491400) Burkholderia pseudomallei MSHR346 7889773 YP_002897256.1 CDS frr NC_012695.1 2491448 2492008 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2491448..2492008) Burkholderia pseudomallei MSHR346 7888252 YP_002897257.1 CDS pyrH NC_012695.1 2492099 2492959 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2492099..2492959) Burkholderia pseudomallei MSHR346 7889352 YP_002897258.1 CDS tsf NC_012695.1 2492991 2493872 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2492991..2493872) Burkholderia pseudomallei MSHR346 7889897 YP_002897259.1 CDS rpsB NC_012695.1 2494055 2494795 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2494055..2494795) Burkholderia pseudomallei MSHR346 7888331 YP_002897260.1 CDS GBP346_A2563 NC_012695.1 2495082 2495234 D identified by glimmer; putative; hypothetical protein 2495082..2495234 Burkholderia pseudomallei MSHR346 7887329 YP_002897261.1 CDS map_1 NC_012695.1 2495278 2496093 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2495278..2496093 Burkholderia pseudomallei MSHR346 7889884 YP_002897262.1 CDS glnD NC_012695.1 2496259 2498835 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2496259..2498835 Burkholderia pseudomallei MSHR346 7887285 YP_002897263.1 CDS GBP346_A2566 NC_012695.1 2498850 2500565 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 2498850..2500565 Burkholderia pseudomallei MSHR346 7887393 YP_002897264.1 CDS def_2 NC_012695.1 2500760 2501293 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2500760..2501293) Burkholderia pseudomallei MSHR346 7890539 YP_002897265.1 CDS ligA NC_012695.1 2501290 2503365 R identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase, NAD-dependent complement(2501290..2503365) Burkholderia pseudomallei MSHR346 7887554 YP_002897266.1 CDS GBP346_A2570 NC_012695.1 2503453 2503815 D hypothetical protein 2503453..2503815 Burkholderia pseudomallei MSHR346 7890456 YP_002897267.1 CDS GBP346_A2569 NC_012695.1 2503805 2505076 R ZipA FtsZ-binding region complement(2503805..2505076) Burkholderia pseudomallei MSHR346 7888281 YP_002897268.1 CDS smc NC_012695.1 2505158 2508670 R identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(2505158..2508670) Burkholderia pseudomallei MSHR346 7888579 YP_002897269.1 CDS GBP346_A2572 NC_012695.1 2508819 2509940 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; integral membrane protein complement(2508819..2509940) Burkholderia pseudomallei MSHR346 7886989 YP_002897270.1 CDS dapC NC_012695.1 2510031 2511263 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2510031..2511263 Burkholderia pseudomallei MSHR346 7886796 YP_002897271.1 CDS dapD NC_012695.1 2511320 2512147 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2511320..2512147 Burkholderia pseudomallei MSHR346 7890690 YP_002897272.1 CDS GBP346_A2575 NC_012695.1 2512147 2512521 D identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; ArsC family protein 2512147..2512521 Burkholderia pseudomallei MSHR346 7890764 YP_002897273.1 CDS dapE NC_012695.1 2512595 2513734 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2512595..2513734 Burkholderia pseudomallei MSHR346 7888002 YP_002897274.1 CDS prmB NC_012695.1 2513748 2514671 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2513748..2514671 Burkholderia pseudomallei MSHR346 7889280 YP_002897275.1 CDS cls NC_012695.1 2514959 2516398 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2514959..2516398 Burkholderia pseudomallei MSHR346 7890631 YP_002897276.1 CDS GBP346_A2579 NC_012695.1 2516511 2516990 R identified by match to protein family HMM PF00255; peroxiredoxin Hyr1 complement(2516511..2516990) Burkholderia pseudomallei MSHR346 7890179 YP_002897277.1 CDS GBP346_A2580 NC_012695.1 2517136 2519076 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2517136..2519076 Burkholderia pseudomallei MSHR346 7890758 YP_002897278.1 CDS GBP346_A2581 NC_012695.1 2519164 2519430 R hypothetical protein complement(2519164..2519430) Burkholderia pseudomallei MSHR346 7889285 YP_002897279.1 CDS radA NC_012695.1 2519594 2520970 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2519594..2520970) Burkholderia pseudomallei MSHR346 7887405 YP_002897280.1 CDS alr NC_012695.1 2520981 2522051 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(2520981..2522051) Burkholderia pseudomallei MSHR346 7890535 YP_002897281.1 CDS GBP346_A2584 NC_012695.1 2522215 2523570 D identified by match to protein family HMM PF07690; lysophospholipid transporter LplT 2522215..2523570 Burkholderia pseudomallei MSHR346 7888821 YP_002897282.1 CDS thiD_1 NC_012695.1 2523681 2524490 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 2523681..2524490 Burkholderia pseudomallei MSHR346 7890864 YP_002897283.1 CDS GBP346_A2586 NC_012695.1 2524548 2524865 D hypothetical protein 2524548..2524865 Burkholderia pseudomallei MSHR346 7890330 YP_002897284.1 CDS GBP346_A2587 NC_012695.1 2524898 2525878 R identified by match to protein family HMM PF08907; hypothetical protein complement(2524898..2525878) Burkholderia pseudomallei MSHR346 7887235 YP_002897285.1 CDS GBP346_A2588 NC_012695.1 2525875 2527281 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase, family 4 complement(2525875..2527281) Burkholderia pseudomallei MSHR346 7888779 YP_002897286.1 CDS rimI NC_012695.1 2527268 2527765 R identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase complement(2527268..2527765) Burkholderia pseudomallei MSHR346 7887325 YP_002897287.1 CDS GBP346_A2590 NC_012695.1 2527762 2528511 R identified by match to protein family HMM PF00814; glycoprotease family protein complement(2527762..2528511) Burkholderia pseudomallei MSHR346 7887419 YP_002897288.1 CDS GBP346_A2591 NC_012695.1 2528693 2528962 D identified by match to protein family HMM PF00887; acyl-CoA-binding protein 2528693..2528962 Burkholderia pseudomallei MSHR346 7888762 YP_002897289.1 CDS GBP346_A2592 NC_012695.1 2529250 2529417 D identified by glimmer; putative; hypothetical protein 2529250..2529417 Burkholderia pseudomallei MSHR346 7887888 YP_002897290.1 CDS GBP346_A2593 NC_012695.1 2529419 2530960 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; dead/deah box helicase 2529419..2530960 Burkholderia pseudomallei MSHR346 7887588 YP_002897291.1 CDS aceA NC_012695.1 2531092 2532660 D identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase 2531092..2532660 Burkholderia pseudomallei MSHR346 7888459 YP_002897292.1 CDS GBP346_A2595 NC_012695.1 2532921 2533355 R identified by match to protein family HMM PF00582; universal stress family protein complement(2532921..2533355) Burkholderia pseudomallei MSHR346 7890387 YP_002897293.1 CDS GBP346_A2596 NC_012695.1 2533342 2533458 D hypothetical protein 2533342..2533458 Burkholderia pseudomallei MSHR346 7888735 YP_002897294.1 CDS GBP346_A2597 NC_012695.1 2533635 2534618 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(2533635..2534618) Burkholderia pseudomallei MSHR346 7887653 YP_002897295.1 CDS dehII NC_012695.1 2534697 2535479 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase, type II 2534697..2535479 Burkholderia pseudomallei MSHR346 7886765 YP_002897296.1 CDS aceB NC_012695.1 2535532 2537124 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2535532..2537124 Burkholderia pseudomallei MSHR346 7887313 YP_002897297.1 CDS GBP346_A2600 NC_012695.1 2537627 2538085 R identified by match to protein family HMM PF06094; AIG2 family protein complement(2537627..2538085) Burkholderia pseudomallei MSHR346 7887191 YP_002897298.1 CDS GBP346_A2601 NC_012695.1 2538082 2538579 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(2538082..2538579) Burkholderia pseudomallei MSHR346 7890297 YP_002897299.1 CDS GBP346_A2602 NC_012695.1 2538709 2539572 D identified by match to protein family HMM PF00165; match to protein family HMM PF02311; transcriptional regulator, AraC family 2538709..2539572 Burkholderia pseudomallei MSHR346 7889322 YP_002897300.1 CDS GBP346_A2603 NC_012695.1 2540208 2540675 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(2540208..2540675) Burkholderia pseudomallei MSHR346 7889424 YP_002897301.1 CDS gltX NC_012695.1 2541760 2543274 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2541760..2543274) Burkholderia pseudomallei MSHR346 7889197 YP_002897302.1 CDS GBP346_A2610 NC_012695.1 2543669 2544712 D identified by match to protein family HMM PF01734; phospholipase, patatin family 2543669..2544712 Burkholderia pseudomallei MSHR346 7890689 YP_002897303.1 CDS GBP346_A2611 NC_012695.1 2544720 2544851 R identified by glimmer; putative; hypothetical protein complement(2544720..2544851) Burkholderia pseudomallei MSHR346 7889944 YP_002897304.1 CDS GBP346_A2612 NC_012695.1 2544878 2545582 R identified by match to protein family HMM PF00877; NlpC/P60 domain protein complement(2544878..2545582) Burkholderia pseudomallei MSHR346 7890796 YP_002897305.1 CDS GBP346_A2613 NC_012695.1 2545718 2547367 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; oligopeptide/dipeptide transporter, C- region family complement(2545718..2547367) Burkholderia pseudomallei MSHR346 7890301 YP_002897306.1 CDS GBP346_A2614 NC_012695.1 2547364 2548461 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(2547364..2548461) Burkholderia pseudomallei MSHR346 7888377 YP_002897307.1 CDS GBP346_A2615 NC_012695.1 2548463 2549503 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(2548463..2549503) Burkholderia pseudomallei MSHR346 7888953 YP_002897308.1 CDS GBP346_A2616 NC_012695.1 2549692 2551644 R identified by match to protein family HMM PF00496; ABC transporter, periplasmic substrate-binding protein complement(2549692..2551644) Burkholderia pseudomallei MSHR346 7889970 YP_002897309.1 CDS GBP346_A2617 NC_012695.1 2551765 2552556 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2551765..2552556 Burkholderia pseudomallei MSHR346 7888609 YP_002897310.1 CDS GBP346_A2618 NC_012695.1 2552808 2553161 R hypothetical protein complement(2552808..2553161) Burkholderia pseudomallei MSHR346 7890199 YP_002897311.1 CDS GBP346_A2619 NC_012695.1 2553421 2553636 D hypothetical protein 2553421..2553636 Burkholderia pseudomallei MSHR346 7887370 YP_002897312.1 CDS GBP346_A2620 NC_012695.1 2553854 2556187 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase complement(2553854..2556187) Burkholderia pseudomallei MSHR346 7888950 YP_002897313.1 CDS GBP346_A2621 NC_012695.1 2556313 2556552 D identified by glimmer; putative; hypothetical protein 2556313..2556552 Burkholderia pseudomallei MSHR346 7887522 YP_002897314.1 CDS fpr_2 NC_012695.1 2556680 2557453 R identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin--NADP reductase complement(2556680..2557453) Burkholderia pseudomallei MSHR346 7887907 YP_002897315.1 CDS GBP346_A2623 NC_012695.1 2557461 2557832 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; identified by match to protein family HMM PF06463; molybdenum cofactor biosynthesis protein A complement(2557461..2557832) Burkholderia pseudomallei MSHR346 7890802 YP_002897316.1 CDS GBP346_A2624 NC_012695.1 2558553 2558891 R identified by match to protein family HMM PF00037; ferredoxin-1 complement(2558553..2558891) Burkholderia pseudomallei MSHR346 7889697 YP_002897317.1 CDS GBP346_A2625 NC_012695.1 2559114 2559935 D identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 2559114..2559935 Burkholderia pseudomallei MSHR346 7888644 YP_002897318.1 CDS map_2 NC_012695.1 2560009 2560827 R identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I complement(2560009..2560827) Burkholderia pseudomallei MSHR346 7890924 YP_002897319.1 CDS GBP346_A2627 NC_012695.1 2560827 2561051 R hypothetical protein complement(2560827..2561051) Burkholderia pseudomallei MSHR346 7890939 YP_002897320.1 CDS GBP346_A2628 NC_012695.1 2561131 2561268 R identified by glimmer; putative; hypothetical protein complement(2561131..2561268) Burkholderia pseudomallei MSHR346 7888702 YP_002897321.1 CDS GBP346_A2629 NC_012695.1 2561277 2563991 R identified by match to protein family HMM PF00206; match to protein family HMM PF02222; match to protein family HMM PF02655; argininosuccinate lyase complement(2561277..2563991) Burkholderia pseudomallei MSHR346 7886986 YP_002897322.1 CDS GBP346_A2630 NC_012695.1 2564071 2565135 R identified by match to protein family HMM PF00291; cysteine synthase/cystathionine beta-synthase family protein complement(2564071..2565135) Burkholderia pseudomallei MSHR346 7888550 YP_002897323.1 CDS GBP346_A2631 NC_012695.1 2565140 2566339 R identified by match to protein family HMM PF00288; ghmp kinase domain protein complement(2565140..2566339) Burkholderia pseudomallei MSHR346 7890830 YP_002897324.1 CDS GBP346_A2632 NC_012695.1 2566362 2567267 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2566362..2567267) Burkholderia pseudomallei MSHR346 7889056 YP_002897325.1 CDS GBP346_A2633 NC_012695.1 2567483 2568301 R identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family complement(2567483..2568301) Burkholderia pseudomallei MSHR346 7889616 YP_002897326.1 CDS GBP346_A2634 NC_012695.1 2568392 2569486 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2568392..2569486) Burkholderia pseudomallei MSHR346 7888390 YP_002897327.1 CDS GBP346_A2635 NC_012695.1 2569527 2570654 R identified by match to protein family HMM PF01757; acyltransferase family protein complement(2569527..2570654) Burkholderia pseudomallei MSHR346 7889319 YP_002897328.1 CDS GBP346_A2636 NC_012695.1 2570706 2571848 R hypothetical protein complement(2570706..2571848) Burkholderia pseudomallei MSHR346 7886846 YP_002897329.1 CDS GBP346_A2637 NC_012695.1 2571845 2572756 R identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C- subunit complement(2571845..2572756) Burkholderia pseudomallei MSHR346 7889117 YP_002897330.1 CDS GBP346_A2638 NC_012695.1 2572753 2573577 R identified by match to protein family HMM PF00456; transketolase, N- subunit complement(2572753..2573577) Burkholderia pseudomallei MSHR346 7886691 YP_002897331.1 CDS GBP346_A2639 NC_012695.1 2573597 2574685 R hypothetical protein complement(2573597..2574685) Burkholderia pseudomallei MSHR346 7887251 YP_002897332.1 CDS GBP346_A2640 NC_012695.1 2574679 2575458 R hypothetical protein complement(2574679..2575458) Burkholderia pseudomallei MSHR346 7888548 YP_002897333.1 CDS GBP346_A2641 NC_012695.1 2575478 2576326 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase family protein complement(2575478..2576326) Burkholderia pseudomallei MSHR346 7889576 YP_002897334.1 CDS GBP346_A2642 NC_012695.1 2576396 2577274 R identified by match to protein family HMM PF02668; dioxygenase, TauD/TfdA complement(2576396..2577274) Burkholderia pseudomallei MSHR346 7889239 YP_002897335.1 CDS GBP346_A2643 NC_012695.1 2577279 2578076 R hypothetical protein complement(2577279..2578076) Burkholderia pseudomallei MSHR346 7886857 YP_002897336.1 CDS GBP346_A2644 NC_012695.1 2578073 2587012 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D complement(2578073..2587012) Burkholderia pseudomallei MSHR346 7888932 YP_002897337.1 CDS GBP346_A2645 NC_012695.1 2587096 2588496 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD dependent oxidoreductase complement(2587096..2588496) Burkholderia pseudomallei MSHR346 7887350 YP_002897338.1 CDS GBP346_A2646 NC_012695.1 2588621 2588749 R hypothetical protein complement(2588621..2588749) Burkholderia pseudomallei MSHR346 7888824 YP_002897339.1 CDS GBP346_A2647 NC_012695.1 2588746 2590047 R identified by match to protein family HMM PF05977; match to protein family HMM PF07690; major facilitator family transporter complement(2588746..2590047) Burkholderia pseudomallei MSHR346 7889389 YP_002897340.1 CDS GBP346_A2648 NC_012695.1 2590115 2592016 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; amino acid adenylation domain protein complement(2590115..2592016) Burkholderia pseudomallei MSHR346 7889159 YP_002897341.1 CDS GBP346_A2649 NC_012695.1 2592004 2593515 R identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase complement(2592004..2593515) Burkholderia pseudomallei MSHR346 7890455 YP_002897342.1 CDS GBP346_A2650 NC_012695.1 2593562 2593675 D identified by glimmer; putative; hypothetical protein 2593562..2593675 Burkholderia pseudomallei MSHR346 7888373 YP_002897343.1 CDS GBP346_A2651 NC_012695.1 2593700 2593816 R hypothetical protein complement(2593700..2593816) Burkholderia pseudomallei MSHR346 7888218 YP_002897344.1 CDS GBP346_A2652 NC_012695.1 2594058 2594276 D hypothetical protein 2594058..2594276 Burkholderia pseudomallei MSHR346 7887764 YP_002897345.1 CDS GBP346_A2653 NC_012695.1 2594609 2594851 D hypothetical protein 2594609..2594851 Burkholderia pseudomallei MSHR346 7888378 YP_002897346.1 CDS GBP346_A2654 NC_012695.1 2594945 2596180 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01409; match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 2594945..2596180 Burkholderia pseudomallei MSHR346 7890307 YP_002897347.1 CDS GBP346_A2655 NC_012695.1 2596177 2599323 D identified by match to protein family HMM PF00873; multidrug resistance protein MdtB (Multidrug transporter mdtB) 2596177..2599323 Burkholderia pseudomallei MSHR346 7887089 YP_002897348.1 CDS GBP346_A2656 NC_012695.1 2599401 2600621 D hypothetical protein 2599401..2600621 Burkholderia pseudomallei MSHR346 7889222 YP_002897349.1 CDS GBP346_A2657 NC_012695.1 2600660 2602492 R identified by match to protein family HMM PF00657; match to protein family HMM PF03797; match to protein family HMM TIGR01414; autotransporter beta-domain protein complement(2600660..2602492) Burkholderia pseudomallei MSHR346 7887442 YP_002897350.1 CDS GBP346_A2658 NC_012695.1 2602694 2603740 R hypothetical protein complement(2602694..2603740) Burkholderia pseudomallei MSHR346 7889589 YP_002897351.1 CDS GBP346_A2659 NC_012695.1 2604051 2604263 R hypothetical protein complement(2604051..2604263) Burkholderia pseudomallei MSHR346 7889843 YP_002897352.1 CDS GBP346_A2661 NC_012695.1 2604998 2606248 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2604998..2606248) Burkholderia pseudomallei MSHR346 7889191 YP_002897353.1 CDS GBP346_A2662 NC_012695.1 2606231 2606473 D hypothetical protein 2606231..2606473 Burkholderia pseudomallei MSHR346 7887256 YP_002897354.1 CDS GBP346_A2663 NC_012695.1 2606589 2608058 R identified by match to protein family HMM PF01171; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthase complement(2606589..2608058) Burkholderia pseudomallei MSHR346 7887780 YP_002897355.1 CDS accA NC_012695.1 2608102 2609073 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2608102..2609073) Burkholderia pseudomallei MSHR346 7888387 YP_002897356.1 CDS GBP346_A2665 NC_012695.1 2609177 2610115 R identified by match to protein family HMM PF00730; DNA-3-methyladenine glycosylase complement(2609177..2610115) Burkholderia pseudomallei MSHR346 7888245 YP_002897357.1 CDS cysS NC_012695.1 2610163 2611560 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2610163..2611560) Burkholderia pseudomallei MSHR346 7890940 YP_002897358.1 CDS GBP346_A2667 NC_012695.1 2611792 2612514 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; tetratricopeptide repeat protein 2611792..2612514 Burkholderia pseudomallei MSHR346 7889260 YP_002897359.1 CDS GBP346_A2668 NC_012695.1 2612571 2613146 D identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase 2612571..2613146 Burkholderia pseudomallei MSHR346 7887514 YP_002897360.1 CDS GBP346_A2669 NC_012695.1 2613227 2613718 D identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 2613227..2613718 Burkholderia pseudomallei MSHR346 7890245 YP_002897361.1 CDS lpxH NC_012695.1 2613743 2614543 D catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2613743..2614543 Burkholderia pseudomallei MSHR346 7890790 YP_002897362.1 CDS GBP346_A2671 NC_012695.1 2614540 2614845 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2614540..2614845 Burkholderia pseudomallei MSHR346 7887953 YP_002897363.1 CDS GBP346_A2672 NC_012695.1 2614892 2615677 R identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; probable serine acetyltransferase (SAT) complement(2614892..2615677) Burkholderia pseudomallei MSHR346 7888410 YP_002897364.1 CDS GBP346_A2673 NC_012695.1 2615868 2616884 R identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050; RNA methyltransferase, TrmH family, group 1 complement(2615868..2616884) Burkholderia pseudomallei MSHR346 7887977 YP_002897365.1 CDS GBP346_A2674 NC_012695.1 2617080 2617883 D identified by match to protein family HMM PF00459; inositol monophosphatase family protein 2617080..2617883 Burkholderia pseudomallei MSHR346 7890341 YP_002897366.1 CDS GBP346_A2675 NC_012695.1 2618152 2618424 R hypothetical protein complement(2618152..2618424) Burkholderia pseudomallei MSHR346 7890283 YP_002897367.1 CDS GBP346_A2676 NC_012695.1 2618641 2618808 D identified by glimmer; putative; hypothetical protein 2618641..2618808 Burkholderia pseudomallei MSHR346 7886816 YP_002897368.1 CDS GBP346_A2677 NC_012695.1 2618960 2619091 R hypothetical protein complement(2618960..2619091) Burkholderia pseudomallei MSHR346 7887672 YP_002897369.1 CDS GBP346_A2679 NC_012695.1 2619224 2619346 D hypothetical protein 2619224..2619346 Burkholderia pseudomallei MSHR346 7889371 YP_002897370.1 CDS GBP346_A2678 NC_012695.1 2619332 2619559 R hypothetical protein complement(2619332..2619559) Burkholderia pseudomallei MSHR346 7890189 YP_002897371.1 CDS GBP346_A2680 NC_012695.1 2619622 2619861 D DNA mismatch repair protein 2619622..2619861 Burkholderia pseudomallei MSHR346 7890817 YP_002897372.1 CDS GBP346_A2681 NC_012695.1 2620036 2622252 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; HypX complement(2620036..2622252) Burkholderia pseudomallei MSHR346 7888300 YP_002897373.1 CDS GBP346_A2682 NC_012695.1 2622438 2623034 R hypothetical protein complement(2622438..2623034) Burkholderia pseudomallei MSHR346 7887434 YP_002897374.1 CDS GBP346_A2683 NC_012695.1 2623132 2623299 D hypothetical protein 2623132..2623299 Burkholderia pseudomallei MSHR346 7887058 YP_002897375.1 CDS GBP346_A2684 NC_012695.1 2623469 2623690 D identified by glimmer; putative; hypothetical protein 2623469..2623690 Burkholderia pseudomallei MSHR346 7888757 YP_002897376.1 CDS GBP346_A2685 NC_012695.1 2624527 2624754 D ATP synthase F0, B' subunit 2624527..2624754 Burkholderia pseudomallei MSHR346 7889737 YP_002897377.1 CDS GBP346_A2686 NC_012695.1 2625992 2626417 D identified by match to protein family HMM PF05488; PAAR motif protein 2625992..2626417 Burkholderia pseudomallei MSHR346 7889548 YP_002897378.1 CDS GBP346_A2687 NC_012695.1 2626414 2626920 D hypothetical protein 2626414..2626920 Burkholderia pseudomallei MSHR346 7888131 YP_002897379.1 CDS GBP346_A2688 NC_012695.1 2626937 2627386 D hypothetical protein 2626937..2627386 Burkholderia pseudomallei MSHR346 7888864 YP_002897380.1 CDS GBP346_A2689 NC_012695.1 2627205 2627873 D hypothetical protein 2627205..2627873 Burkholderia pseudomallei MSHR346 7887679 YP_002897381.1 CDS GBP346_A2690 NC_012695.1 2627885 2628595 D hypothetical protein 2627885..2628595 Burkholderia pseudomallei MSHR346 7886784 YP_002897382.1 CDS GBP346_A2691 NC_012695.1 2628636 2629424 R identified by match to protein family HMM PF02086; DNA adenine methylase complement(2628636..2629424) Burkholderia pseudomallei MSHR346 7890537 YP_002897383.1 CDS GBP346_A2692 NC_012695.1 2629568 2630113 R bacteriophage lysis protein complement(2629568..2630113) Burkholderia pseudomallei MSHR346 7890266 YP_002897384.1 CDS GBP346_A2693 NC_012695.1 2630113 2630610 R identified by match to protein family HMM PF00959; gp24 complement(2630113..2630610) Burkholderia pseudomallei MSHR346 7890091 YP_002897385.1 CDS GBP346_A2694 NC_012695.1 2630603 2630797 R hypothetical protein complement(2630603..2630797) Burkholderia pseudomallei MSHR346 7887729 YP_002897386.1 CDS GBP346_A2695 NC_012695.1 2631025 2631474 D hypothetical protein 2631025..2631474 Burkholderia pseudomallei MSHR346 7890832 YP_002897387.1 CDS GBP346_A2696 NC_012695.1 2631606 2632658 R identified by match to protein family HMM PF05954; pyocin R2_PP, tail formation complement(2631606..2632658) Burkholderia pseudomallei MSHR346 7890411 YP_002897388.1 CDS GBP346_A2697 NC_012695.1 2632668 2632883 R identified by match to protein family HMM PF05489; phage Tail Protein X complement(2632668..2632883) Burkholderia pseudomallei MSHR346 7888908 YP_002897389.1 CDS GBP346_A2698 NC_012695.1 2632849 2633730 R identified by match to protein family HMM PF06995; phage P2 GpU family protein complement(2632849..2633730) Burkholderia pseudomallei MSHR346 7888010 YP_002897390.1 CDS GBP346_A2699 NC_012695.1 2633739 2636153 R identified by match to protein family HMM TIGR01760; tail tape meausure protein complement(2633739..2636153) Burkholderia pseudomallei MSHR346 7886954 YP_002897391.1 CDS GBP346_A2700 NC_012695.1 2636171 2636287 R identified by glimmer; putative; hypothetical protein complement(2636171..2636287) Burkholderia pseudomallei MSHR346 7890391 YP_002897392.1 CDS GBP346_A2701 NC_012695.1 2636241 2636543 R hypothetical protein complement(2636241..2636543) Burkholderia pseudomallei MSHR346 7888544 YP_002897393.1 CDS GBP346_A2702 NC_012695.1 2636613 2637116 R identified by match to protein family HMM PF04985; match to protein family HMM TIGR01611; phage major tail tube protein complement(2636613..2637116) Burkholderia pseudomallei MSHR346 7886748 YP_002897394.1 CDS GBP346_A2703 NC_012695.1 2637127 2638296 R identified by match to protein family HMM PF04984; phage tail sheath protein complement(2637127..2638296) Burkholderia pseudomallei MSHR346 7886793 YP_002897395.1 CDS GBP346_A2704 NC_012695.1 2638362 2638814 R hypothetical protein complement(2638362..2638814) Burkholderia pseudomallei MSHR346 7890252 YP_002897396.1 CDS GBP346_A2705 NC_012695.1 2638830 2640293 R gp26 complement(2638830..2640293) Burkholderia pseudomallei MSHR346 7888700 YP_002897397.1 CDS GBP346_A2706 NC_012695.1 2640281 2640856 R identified by match to protein family HMM PF09684; match to protein family HMM TIGR01634; phage tail protein I complement(2640281..2640856) Burkholderia pseudomallei MSHR346 7889450 YP_002897398.1 CDS GBP346_A2707 NC_012695.1 2640849 2641742 R identified by match to protein family HMM PF04865; hypothetical protein complement(2640849..2641742) Burkholderia pseudomallei MSHR346 7890839 YP_002897399.1 CDS GBP346_A2708 NC_012695.1 2641739 2642083 R identified by match to protein family HMM PF04965; GPW/gp25 family protein complement(2641739..2642083) Burkholderia pseudomallei MSHR346 7887655 YP_002897400.1 CDS GBP346_A2709 NC_012695.1 2642080 2642286 R hypothetical protein complement(2642080..2642286) Burkholderia pseudomallei MSHR346 7888848 YP_002897401.1 CDS GBP346_A2710 NC_012695.1 2642351 2643031 R identified by match to protein family HMM PF04717; match to protein family HMM TIGR01644; phage baseplate assembly protein V complement(2642351..2643031) Burkholderia pseudomallei MSHR346 7888017 YP_002897402.1 CDS GBP346_A2711 NC_012695.1 2643034 2643567 R hypothetical protein complement(2643034..2643567) Burkholderia pseudomallei MSHR346 7889252 YP_002897403.1 CDS GBP346_A2712 NC_012695.1 2643557 2644087 R hypothetical protein complement(2643557..2644087) Burkholderia pseudomallei MSHR346 7890573 YP_002897404.1 CDS GBP346_A2713 NC_012695.1 2644089 2644379 R hypothetical protein complement(2644089..2644379) Burkholderia pseudomallei MSHR346 7888525 YP_002897405.1 CDS GBP346_A2714 NC_012695.1 2644383 2645477 R hypothetical protein complement(2644383..2645477) Burkholderia pseudomallei MSHR346 7887468 YP_002897406.1 CDS GBP346_A2715 NC_012695.1 2645443 2645787 R hypothetical protein complement(2645443..2645787) Burkholderia pseudomallei MSHR346 7888768 YP_002897407.1 CDS GBP346_A2716 NC_012695.1 2645814 2646914 R identified by match to protein family HMM PF00574; peptidase S14, ClpP complement(2645814..2646914) Burkholderia pseudomallei MSHR346 7889662 YP_002897408.1 CDS GBP346_A2717 NC_012695.1 2646911 2648404 R identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539; phage portal protein, lambda family complement(2646911..2648404) Burkholderia pseudomallei MSHR346 7888254 YP_002897409.1 CDS GBP346_A2718 NC_012695.1 2648401 2648607 R hypothetical protein complement(2648401..2648607) Burkholderia pseudomallei MSHR346 7889780 YP_002897410.1 CDS GBP346_A2719 NC_012695.1 2648618 2650729 R identified by match to protein family HMM PF05876; phage terminase large subunit (GpA) complement(2648618..2650729) Burkholderia pseudomallei MSHR346 7886877 YP_002897411.1 CDS GBP346_A2720 NC_012695.1 2650566 2650994 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(2650566..2650994) Burkholderia pseudomallei MSHR346 7890698 YP_002897412.1 CDS GBP346_A2721 NC_012695.1 2651231 2651419 R hypothetical protein complement(2651231..2651419) Burkholderia pseudomallei MSHR346 7887938 YP_002897413.1 CDS GBP346_A2722 NC_012695.1 2652224 2652811 R hypothetical protein complement(2652224..2652811) Burkholderia pseudomallei MSHR346 7887568 YP_002897414.1 CDS GBP346_A2723 NC_012695.1 2653029 2655521 R identified by match to protein family HMM PF05272; virulence-associated E family protein complement(2653029..2655521) Burkholderia pseudomallei MSHR346 7888992 YP_002897415.1 CDS GBP346_A2724 NC_012695.1 2655641 2656111 R hypothetical protein complement(2655641..2656111) Burkholderia pseudomallei MSHR346 7890549 YP_002897416.1 CDS GBP346_A2725 NC_012695.1 2656242 2656415 R identified by glimmer; putative; hypothetical protein complement(2656242..2656415) Burkholderia pseudomallei MSHR346 7888171 YP_002897417.1 CDS GBP346_A2726 NC_012695.1 2657016 2657360 R hypothetical protein complement(2657016..2657360) Burkholderia pseudomallei MSHR346 7886967 YP_002897418.1 CDS GBP346_A2727 NC_012695.1 2657362 2657853 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(2657362..2657853) Burkholderia pseudomallei MSHR346 7889919 YP_002897419.1 CDS GBP346_A2728 NC_012695.1 2659184 2659303 D identified by glimmer; putative; hypothetical protein 2659184..2659303 Burkholderia pseudomallei MSHR346 7888463 YP_002897420.1 CDS GBP346_A2729 NC_012695.1 2659355 2659690 D hypothetical protein 2659355..2659690 Burkholderia pseudomallei MSHR346 7889535 YP_002897421.1 CDS GBP346_A2730 NC_012695.1 2659687 2660292 D identified by glimmer; putative; hypothetical protein 2659687..2660292 Burkholderia pseudomallei MSHR346 7887894 YP_002897422.1 CDS GBP346_A2731 NC_012695.1 2660289 2660738 D identified by glimmer; putative; hypothetical protein 2660289..2660738 Burkholderia pseudomallei MSHR346 7888496 YP_002897423.1 CDS GBP346_A2732 NC_012695.1 2660738 2662054 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 2660738..2662054 Burkholderia pseudomallei MSHR346 7888031 YP_002897424.1 CDS GBP346_A2733 NC_012695.1 2662159 2662335 R identified by glimmer; putative; hypothetical protein complement(2662159..2662335) Burkholderia pseudomallei MSHR346 7887530 YP_002897425.1 CDS GBP346_A2734 NC_012695.1 2662318 2662497 D identified by glimmer; putative; hypothetical protein 2662318..2662497 Burkholderia pseudomallei MSHR346 7886931 YP_002897426.1 CDS GBP346_A2735 NC_012695.1 2662506 2662979 D identified by glimmer; putative; hypothetical protein 2662506..2662979 Burkholderia pseudomallei MSHR346 7887098 YP_002897427.1 CDS GBP346_A2736 NC_012695.1 2663181 2664482 R identified by match to protein family HMM PF00589; integrase family protein complement(2663181..2664482) Burkholderia pseudomallei MSHR346 7889856 YP_002897428.1 CDS mutS NC_012695.1 2664642 2667326 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2664642..2667326 Burkholderia pseudomallei MSHR346 7889325 YP_002897429.1 CDS GBP346_A2739 NC_012695.1 2667313 2668611 D hypothetical protein 2667313..2668611 Burkholderia pseudomallei MSHR346 7889053 YP_002897430.1 CDS GBP346_A2738 NC_012695.1 2668591 2669136 R fkbp-type peptidyl-prolyl cis-trans isomerase complement(2668591..2669136) Burkholderia pseudomallei MSHR346 7888906 YP_002897431.1 CDS GBP346_A2740 NC_012695.1 2669205 2670392 D identified by match to protein family HMM PF08007; cupin domain protein 2669205..2670392 Burkholderia pseudomallei MSHR346 7888345 YP_002897432.1 CDS GBP346_A2741 NC_012695.1 2671119 2671895 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2671119..2671895) Burkholderia pseudomallei MSHR346 7888935 YP_002897433.1 CDS GBP346_A2742 NC_012695.1 2671900 2673042 R putative lipoprotein complement(2671900..2673042) Burkholderia pseudomallei MSHR346 7889657 YP_002897434.1 CDS dapA_2 NC_012695.1 2673153 2674055 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(2673153..2674055) Burkholderia pseudomallei MSHR346 7887996 YP_002897435.1 CDS GBP346_A2744 NC_012695.1 2674100 2674717 R hypothetical protein complement(2674100..2674717) Burkholderia pseudomallei MSHR346 7886768 YP_002897436.1 CDS trpS_1 NC_012695.1 2674714 2675916 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2674714..2675916) Burkholderia pseudomallei MSHR346 7890714 YP_002897437.1 CDS GBP346_A2746 NC_012695.1 2675925 2676590 R identified by match to protein family HMM PF02163; putative membrane-associated zinc metalloprotease complement(2675925..2676590) Burkholderia pseudomallei MSHR346 7888777 YP_002897438.1 CDS GBP346_A2747 NC_012695.1 2676689 2677318 R identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein complement(2676689..2677318) Burkholderia pseudomallei MSHR346 7887006 YP_002897439.1 CDS GBP346_A2748 NC_012695.1 2677383 2678213 R identified by match to protein family HMM PF02811; PHP C- domain protein complement(2677383..2678213) Burkholderia pseudomallei MSHR346 7888244 YP_002897440.1 CDS GBP346_A2749 NC_012695.1 2678229 2678468 R identified by glimmer; putative; hypothetical protein complement(2678229..2678468) Burkholderia pseudomallei MSHR346 7886710 YP_002897441.1 CDS GBP346_A2750 NC_012695.1 2678476 2679366 R identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein complement(2678476..2679366) Burkholderia pseudomallei MSHR346 7889911 YP_002897442.1 CDS GBP346_A2751 NC_012695.1 2679521 2680339 R identified by match to protein family HMM PF04305; hypothetical protein complement(2679521..2680339) Burkholderia pseudomallei MSHR346 7887457 YP_002897443.1 CDS GBP346_A2752 NC_012695.1 2680549 2681073 D identified by match to protein family HMM PF00132; transferase hexapeptide domain protein 2680549..2681073 Burkholderia pseudomallei MSHR346 7890121 YP_002897444.1 CDS hslO NC_012695.1 2681112 2682062 D identified by match to protein family HMM PF01430; chaperonin HslO 2681112..2682062 Burkholderia pseudomallei MSHR346 7890500 YP_002897445.1 CDS GBP346_A2754 NC_012695.1 2682146 2682493 D putative lipoprotein 2682146..2682493 Burkholderia pseudomallei MSHR346 7889469 YP_002897446.1 CDS ftsB NC_012695.1 2682703 2683134 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(2682703..2683134) Burkholderia pseudomallei MSHR346 7889565 YP_002897447.1 CDS eno NC_012695.1 2683226 2684509 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2683226..2684509) Burkholderia pseudomallei MSHR346 7887418 YP_002897448.1 CDS kdsA_1 NC_012695.1 2684613 2685467 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2684613..2685467) Burkholderia pseudomallei MSHR346 7888473 YP_002897449.1 CDS pyrG NC_012695.1 2685464 2687125 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2685464..2687125) Burkholderia pseudomallei MSHR346 7889663 YP_002897450.1 CDS GBP346_A2760 NC_012695.1 2687132 2687431 D hypothetical protein 2687132..2687431 Burkholderia pseudomallei MSHR346 7888804 YP_002897451.1 CDS GBP346_A2759 NC_012695.1 2687382 2688209 R hypothetical protein complement(2687382..2688209) Burkholderia pseudomallei MSHR346 7887657 YP_002897452.1 CDS GBP346_A2761 NC_012695.1 2688246 2690816 R identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 complement(2688246..2690816) Burkholderia pseudomallei MSHR346 7889569 YP_002897453.1 CDS GBP346_A2762 NC_012695.1 2690827 2691615 R identified by match to protein family HMM PF01026; hydrolase, TatD family complement(2690827..2691615) Burkholderia pseudomallei MSHR346 7887178 YP_002897454.1 CDS lolD NC_012695.1 2691620 2692369 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02211; lipoprotein releasing system, ATP-binding protein complement(2691620..2692369) Burkholderia pseudomallei MSHR346 7888079 YP_002897455.1 CDS GBP346_A2764 NC_012695.1 2692362 2693615 R identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212; lipoprotein releasing system, hypothetical protein, LolC/E family complement(2692362..2693615) Burkholderia pseudomallei MSHR346 7890586 YP_002897456.1 CDS GBP346_A2765 NC_012695.1 2693634 2694017 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2693634..2694017 Burkholderia pseudomallei MSHR346 7888362 YP_002897457.1 CDS GBP346_A2766 NC_012695.1 2694053 2694199 R hypothetical protein complement(2694053..2694199) Burkholderia pseudomallei MSHR346 7888837 YP_002897458.1 CDS GBP346_A2767 NC_012695.1 2694188 2695264 D hypothetical protein 2694188..2695264 Burkholderia pseudomallei MSHR346 7887009 YP_002897459.1 CDS recJ NC_012695.1 2695280 2696974 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 2695280..2696974 Burkholderia pseudomallei MSHR346 7888048 YP_002897460.1 CDS prfB NC_012695.1 2697335 2698439 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 join(2697335..2697417,2697419..2698439) Burkholderia pseudomallei MSHR346 7887854 YP_002897461.1 CDS lysS NC_012695.1 2698533 2700059 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2698533..2700059 Burkholderia pseudomallei MSHR346 7888187 YP_002897462.1 CDS GBP346_A2771 NC_012695.1 2700410 2701135 D identified by match to protein family HMM PF05433; 17 kDa surface antigen 2700410..2701135 Burkholderia pseudomallei MSHR346 7888149 YP_002897463.1 CDS GBP346_A2772 NC_012695.1 2701264 2701563 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2701264..2701563) Burkholderia pseudomallei MSHR346 7889854 YP_002897464.1 CDS iscX NC_012695.1 2701560 2701769 R identified by match to protein family HMM PF04384; match to protein family HMM TIGR03412; FeS assembly protein IscX complement(2701560..2701769) Burkholderia pseudomallei MSHR346 7888567 YP_002897465.1 CDS fdx NC_012695.1 2701788 2702129 R identified by match to protein family HMM PF00111; match to protein family HMM TIGR02007; ferredoxin, 2Fe-2S type, ISC system complement(2701788..2702129) Burkholderia pseudomallei MSHR346 7887513 YP_002897466.1 CDS hscA NC_012695.1 2702222 2704090 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(2702222..2704090) Burkholderia pseudomallei MSHR346 7889948 YP_002897467.1 CDS hscB NC_012695.1 2704148 2704666 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(2704148..2704666) Burkholderia pseudomallei MSHR346 7888558 YP_002897468.1 CDS iscA NC_012695.1 2704788 2705111 R identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; match to protein family HMM TIGR02011; iron-sulfur cluster assembly protein IscA complement(2704788..2705111) Burkholderia pseudomallei MSHR346 7890128 YP_002897469.1 CDS iscU NC_012695.1 2705194 2705601 R identified by match to protein family HMM PF01592; match to protein family HMM TIGR01999; scaffold protein complement(2705194..2705601) Burkholderia pseudomallei MSHR346 7888614 YP_002897470.1 CDS iscS NC_012695.1 2705667 2706890 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(2705667..2706890) Burkholderia pseudomallei MSHR346 7887673 YP_002897471.1 CDS GBP346_A2780 NC_012695.1 2706959 2707498 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; match to protein family HMM TIGR02010; iron-sulfur cluster assembly transcription factor IscR complement(2706959..2707498) Burkholderia pseudomallei MSHR346 7888032 YP_002897472.1 CDS GBP346_A2781 NC_012695.1 2707600 2708094 R identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase complement(2707600..2708094) Burkholderia pseudomallei MSHR346 7890310 YP_002897473.1 CDS GBP346_A2782 NC_012695.1 2708171 2708398 R hypothetical protein complement(2708171..2708398) Burkholderia pseudomallei MSHR346 7887127 YP_002897474.1 CDS GBP346_A2783 NC_012695.1 2708542 2709993 R identified by match to protein family HMM PF02589; iron-sulfur cluster binding protein complement(2708542..2709993) Burkholderia pseudomallei MSHR346 7887693 YP_002897475.1 CDS GBP346_A2784 NC_012695.1 2710135 2710857 R identified by match to protein family HMM PF02754; cysteine-rich domain protein complement(2710135..2710857) Burkholderia pseudomallei MSHR346 7888690 YP_002897476.1 CDS GBP346_A2785 NC_012695.1 2711040 2711852 D identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 2711040..2711852 Burkholderia pseudomallei MSHR346 7890309 YP_002897477.1 CDS GBP346_A2786 NC_012695.1 2711968 2713047 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase family protein complement(2711968..2713047) Burkholderia pseudomallei MSHR346 7887100 YP_002897478.1 CDS GBP346_A2787 NC_012695.1 2713421 2713546 R identified by glimmer; putative; hypothetical protein complement(2713421..2713546) Burkholderia pseudomallei MSHR346 7887702 YP_002897479.1 CDS GBP346_A2788 NC_012695.1 2713753 2714328 D identified by match to protein family HMM PF09361; match to protein family HMM TIGR01841; phasin family protein 2713753..2714328 Burkholderia pseudomallei MSHR346 7889313 YP_002897480.1 CDS GBP346_A2789 NC_012695.1 2714417 2715898 D identified by match to protein family HMM PF01609; ISBma2, transposase 2714417..2715898 Burkholderia pseudomallei MSHR346 7890437 YP_002897481.1 CDS lpdA_2 NC_012695.1 2716204 2717979 R identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoyl dehydrogenase complement(2716204..2717979) Burkholderia pseudomallei MSHR346 7890878 YP_002897482.1 CDS aceF NC_012695.1 2718286 2719929 R identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR01348; dihydrolipoamide acetyltransferase complement(2718286..2719929) Burkholderia pseudomallei MSHR346 7890149 YP_002897483.1 CDS aceE NC_012695.1 2720062 2722758 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2720062..2722758) Burkholderia pseudomallei MSHR346 7888652 YP_002897484.1 CDS GBP346_A2793 NC_012695.1 2722890 2723111 R hypothetical protein complement(2722890..2723111) Burkholderia pseudomallei MSHR346 7888718 YP_002897485.1 CDS GBP346_A2794 NC_012695.1 2723172 2725541 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; sensory box histidine kinase 2723172..2725541 Burkholderia pseudomallei MSHR346 7890616 YP_002897486.1 CDS GBP346_A2795 NC_012695.1 2725538 2726176 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281; transcriptional regulatory protein FixJ 2725538..2726176 Burkholderia pseudomallei MSHR346 7890225 YP_002897487.1 CDS GBP346_A2796 NC_012695.1 2726493 2727350 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2726493..2727350 Burkholderia pseudomallei MSHR346 7887479 YP_002897488.1 CDS GBP346_A2797 NC_012695.1 2727828 2727989 R hypothetical protein complement(2727828..2727989) Burkholderia pseudomallei MSHR346 7889465 YP_002897489.1 CDS GBP346_A2798 NC_012695.1 2728123 2730222 D identified by match to protein family HMM PF01432; oligopeptidase A 2728123..2730222 Burkholderia pseudomallei MSHR346 7888781 YP_002897490.1 CDS dinB NC_012695.1 2730353 2731573 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2730353..2731573) Burkholderia pseudomallei MSHR346 7889789 YP_002897491.1 CDS GBP346_A2800 NC_012695.1 2731526 2731810 D hypothetical protein 2731526..2731810 Burkholderia pseudomallei MSHR346 7888623 YP_002897492.1 CDS narD_1 NC_012695.1 2732312 2733592 D identified by match to protein family HMM PF07690; transporter, nitrate/nitrite porter (NNP) family 2732312..2733592 Burkholderia pseudomallei MSHR346 7889215 YP_002897493.1 CDS GBP346_A2803 NC_012695.1 2733636 2735021 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00886; nitrite extrusion protein 1 (Nitrite facilitator 1) 2733636..2735021 Burkholderia pseudomallei MSHR346 7888011 YP_002897494.1 CDS GBP346_A2804 NC_012695.1 2735134 2735280 R hypothetical protein complement(2735134..2735280) Burkholderia pseudomallei MSHR346 7886725 YP_002897495.1 CDS GBP346_A2805 NC_012695.1 2735272 2738997 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01580; nitrate reductase, alpha subunit 2735272..2738997 Burkholderia pseudomallei MSHR346 7890665 YP_002897496.1 CDS narH_1 NC_012695.1 2738994 2740547 D identified by match to protein family HMM TIGR01660; nitrate reductase, beta subunit 2738994..2740547 Burkholderia pseudomallei MSHR346 7888176 YP_002897497.1 CDS GBP346_A2807 NC_012695.1 2740544 2741248 D identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684; nitrate reductase, delta subunit 2740544..2741248 Burkholderia pseudomallei MSHR346 7890087 YP_002897498.1 CDS narI_1 NC_012695.1 2741285 2741971 D identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351; respiratory nitrate reductase, gamma subunit 2741285..2741971 Burkholderia pseudomallei MSHR346 7888962 YP_002897499.1 CDS GBP346_A2809 NC_012695.1 2742113 2744047 D identified by match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; nitrate/nitrite sensor protein NarX 2742113..2744047 Burkholderia pseudomallei MSHR346 7889380 YP_002897500.1 CDS GBP346_A2810 NC_012695.1 2744071 2744772 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04967; transcriptional regulatory protein DegU (Protease production enhancerprotein) 2744071..2744772 Burkholderia pseudomallei MSHR346 7888948 YP_002897501.1 CDS xth_2 NC_012695.1 2744918 2745694 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 2744918..2745694 Burkholderia pseudomallei MSHR346 7887318 YP_002897502.1 CDS ntrC NC_012695.1 2745983 2747518 R identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR01818; nitrogen regulation protein complement(2745983..2747518) Burkholderia pseudomallei MSHR346 7889926 YP_002897503.1 CDS ntrB NC_012695.1 2747556 2748698 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; nitrogen regulation protein NR(II) complement(2747556..2748698) Burkholderia pseudomallei MSHR346 7888999 YP_002897504.1 CDS glnA NC_012695.1 2748865 2750280 R identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I complement(2748865..2750280) Burkholderia pseudomallei MSHR346 7889418 YP_002897505.1 CDS GBP346_A2815 NC_012695.1 2750329 2750523 R hypothetical protein complement(2750329..2750523) Burkholderia pseudomallei MSHR346 7889934 YP_002897506.1 CDS GBP346_A2816 NC_012695.1 2750685 2751149 D rhodanese domain protein 2750685..2751149 Burkholderia pseudomallei MSHR346 7889658 YP_002897507.1 CDS GBP346_A2817 NC_012695.1 2751402 2752220 R identified by match to protein family HMM PF00994; molybdopterin-binding protein complement(2751402..2752220) Burkholderia pseudomallei MSHR346 7889058 YP_002897508.1 CDS GBP346_A2818 NC_012695.1 2752217 2753050 R hypothetical protein complement(2752217..2753050) Burkholderia pseudomallei MSHR346 7889630 YP_002897509.1 CDS GBP346_A2819 NC_012695.1 2753106 2753372 D hypothetical protein 2753106..2753372 Burkholderia pseudomallei MSHR346 7889135 YP_002897510.1 CDS GBP346_A2820 NC_012695.1 2753587 2754576 R identified by match to protein family HMM PF04116; fatty acid hydroxylase complement(2753587..2754576) Burkholderia pseudomallei MSHR346 7888585 YP_002897511.1 CDS GBP346_A2821 NC_012695.1 2754593 2755585 R identified by match to protein family HMM PF02239; 40-residue yvtn family beta-propeller repeat protein complement(2754593..2755585) Burkholderia pseudomallei MSHR346 7890147 YP_002897512.1 CDS GBP346_A2822 NC_012695.1 2755592 2755708 R hypothetical protein complement(2755592..2755708) Burkholderia pseudomallei MSHR346 7888329 YP_002897513.1 CDS hrpA NC_012695.1 2755687 2759814 R identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA complement(2755687..2759814) Burkholderia pseudomallei MSHR346 7890763 YP_002897514.1 CDS argA NC_012695.1 2759838 2761214 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2759838..2761214 Burkholderia pseudomallei MSHR346 7888468 YP_002897515.1 CDS GBP346_A2825 NC_012695.1 2761267 2761542 D identified by match to protein family HMM PF04362; hypothetical protein 2761267..2761542 Burkholderia pseudomallei MSHR346 7887998 YP_002897516.1 CDS GBP346_A2826 NC_012695.1 2761716 2763047 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter, major facilitator family complement(2761716..2763047) Burkholderia pseudomallei MSHR346 7889734 YP_002897517.1 CDS GBP346_A2827 NC_012695.1 2763044 2763259 R hypothetical protein complement(2763044..2763259) Burkholderia pseudomallei MSHR346 7887774 YP_002897518.1 CDS GBP346_A2828 NC_012695.1 2763256 2764800 R identified by match to protein family HMM PF02515; caib/baif family protein complement(2763256..2764800) Burkholderia pseudomallei MSHR346 7887032 YP_002897519.1 CDS GBP346_A2829 NC_012695.1 2764797 2766584 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein complement(2764797..2766584) Burkholderia pseudomallei MSHR346 7888114 YP_002897520.1 CDS GBP346_A2830 NC_012695.1 2766693 2767595 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2766693..2767595 Burkholderia pseudomallei MSHR346 7888531 YP_002897521.1 CDS GBP346_A2832 NC_012695.1 2767982 2768782 R hypothetical protein complement(2767982..2768782) Burkholderia pseudomallei MSHR346 7889210 YP_002897522.1 CDS GBP346_A2833 NC_012695.1 2769022 2769507 R hypothetical protein complement(2769022..2769507) Burkholderia pseudomallei MSHR346 7890675 YP_002897523.1 CDS GBP346_A2834 NC_012695.1 2769724 2771151 R identified by match to protein family HMM PF00202; putative aminotransferase complement(2769724..2771151) Burkholderia pseudomallei MSHR346 7889610 YP_002897524.1 CDS GBP346_A2835 NC_012695.1 2771186 2772520 R identified by match to protein family HMM PF00120; glutamine synthetase family protein complement(2771186..2772520) Burkholderia pseudomallei MSHR346 7887303 YP_002897525.1 CDS GBP346_A2836 NC_012695.1 2772553 2773584 R identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase, class I complement(2772553..2773584) Burkholderia pseudomallei MSHR346 7890956 YP_002897526.1 CDS GBP346_A2837 NC_012695.1 2773641 2773844 R hypothetical protein complement(2773641..2773844) Burkholderia pseudomallei MSHR346 7888979 YP_002897527.1 CDS GBP346_A2839 NC_012695.1 2774152 2774358 D identified by glimmer; putative; hypothetical protein 2774152..2774358 Burkholderia pseudomallei MSHR346 7890085 YP_002897528.1 CDS hutG NC_012695.1 2774352 2775155 R identified by match to protein family HMM PF05013; match to protein family HMM TIGR02017; N-formylglutamate deformylase complement(2774352..2775155) Burkholderia pseudomallei MSHR346 7889107 YP_002897529.1 CDS GBP346_A2840 NC_012695.1 2775152 2775346 R hypothetical protein complement(2775152..2775346) Burkholderia pseudomallei MSHR346 7886813 YP_002897530.1 CDS hutF NC_012695.1 2775399 2776781 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(2775399..2776781) Burkholderia pseudomallei MSHR346 7886822 YP_002897531.1 CDS hutI NC_012695.1 2776795 2778018 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2776795..2778018) Burkholderia pseudomallei MSHR346 7889986 YP_002897532.1 CDS GBP346_A2843 NC_012695.1 2778015 2778653 R identified by match to protein family HMM PF05962; hypothetical protein complement(2778015..2778653) Burkholderia pseudomallei MSHR346 7888629 YP_002897533.1 CDS hutU_2 NC_012695.1 2778674 2780362 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2778674..2780362) Burkholderia pseudomallei MSHR346 7887508 YP_002897534.1 CDS hutC NC_012695.1 2780405 2781100 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02018; histidine utilization repressor complement(2780405..2781100) Burkholderia pseudomallei MSHR346 7889641 YP_002897535.1 CDS hutH NC_012695.1 2781105 2782628 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2781105..2782628) Burkholderia pseudomallei MSHR346 7886717 YP_002897536.1 CDS GBP346_A2847 NC_012695.1 2782868 2783035 D identified by glimmer; putative; hypothetical protein 2782868..2783035 Burkholderia pseudomallei MSHR346 7887268 YP_002897537.1 CDS GBP346_A2848 NC_012695.1 2783297 2784088 R identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase family protein complement(2783297..2784088) Burkholderia pseudomallei MSHR346 7887005 YP_002897538.1 CDS GBP346_A2849 NC_012695.1 2784193 2785203 R hypothetical protein complement(2784193..2785203) Burkholderia pseudomallei MSHR346 7888698 YP_002897539.1 CDS GBP346_A2850 NC_012695.1 2785221 2785856 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 4'-phosphopantetheinyl transferase family protein complement(2785221..2785856) Burkholderia pseudomallei MSHR346 7890062 YP_002897540.1 CDS GBP346_A2851 NC_012695.1 2786404 2787129 R identified by match to protein family HMM PF00196; match to protein family HMM PF03472; match to protein family HMM PF04967; autoinducer-binding transcriptional regulator, LuxR family complement(2786404..2787129) Burkholderia pseudomallei MSHR346 7889048 YP_002897541.1 CDS GBP346_A2852 NC_012695.1 2787211 2787351 R hypothetical protein complement(2787211..2787351) Burkholderia pseudomallei MSHR346 7886995 YP_002897542.1 CDS GBP346_A2853 NC_012695.1 2787400 2787633 R hypothetical protein complement(2787400..2787633) Burkholderia pseudomallei MSHR346 7890127 YP_002897543.1 CDS GBP346_A2854 NC_012695.1 2787863 2787982 R identified by glimmer; putative; hypothetical protein complement(2787863..2787982) Burkholderia pseudomallei MSHR346 7888413 YP_002897544.1 CDS cysC_2 NC_012695.1 2787982 2788602 R identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; adenylyl-sulfate kinase complement(2787982..2788602) Burkholderia pseudomallei MSHR346 7887926 YP_002897545.1 CDS phrB NC_012695.1 2788733 2790193 R identified by match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase complement(2788733..2790193) Burkholderia pseudomallei MSHR346 7888538 YP_002897546.1 CDS GBP346_A2857 NC_012695.1 2790613 2791779 D identified by match to protein family HMM PF00487; alkane 1-monooxygenase 2790613..2791779 Burkholderia pseudomallei MSHR346 7886746 YP_002897547.1 CDS GBP346_A2858 NC_012695.1 2792050 2792316 R hypothetical protein complement(2792050..2792316) Burkholderia pseudomallei MSHR346 7888076 YP_002897548.1 CDS GBP346_A2859 NC_012695.1 2792549 2794837 D nitric oxide reductase, subunit B 2792549..2794837 Burkholderia pseudomallei MSHR346 7888112 YP_002897549.1 CDS GBP346_A2860 NC_012695.1 2794917 2795261 D identified by match to protein family HMM PF01883; mrp protein 2794917..2795261 Burkholderia pseudomallei MSHR346 7887137 YP_002897550.1 CDS GBP346_A2861 NC_012695.1 2795316 2796449 D putative lipoprotein 2795316..2796449 Burkholderia pseudomallei MSHR346 7889672 YP_002897551.1 CDS GBP346_A2862 NC_012695.1 2796490 2797818 D identified by match to protein family HMM PF05940; heme/copper membrane protein 2796490..2797818 Burkholderia pseudomallei MSHR346 7888475 YP_002897552.1 CDS GBP346_A2863 NC_012695.1 2797823 2798302 D hypothetical protein 2797823..2798302 Burkholderia pseudomallei MSHR346 7888814 YP_002897553.1 CDS nrdD NC_012695.1 2798416 2800179 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2798416..2800179 Burkholderia pseudomallei MSHR346 7888596 YP_002897554.1 CDS GBP346_A2865 NC_012695.1 2800182 2800394 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; anaerobic ribonucleoside triphosphate reductase 2800182..2800394 Burkholderia pseudomallei MSHR346 7888956 YP_002897555.1 CDS GBP346_A2866 NC_012695.1 2800449 2801132 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR02495; anaerobic ribonucleoside-triphosphate reductase activating protein 2800449..2801132 Burkholderia pseudomallei MSHR346 7887062 YP_002897556.1 CDS GBP346_A2867 NC_012695.1 2801212 2801343 R hypothetical protein complement(2801212..2801343) Burkholderia pseudomallei MSHR346 7890488 YP_002897557.1 CDS GBP346_A2868 NC_012695.1 2801380 2801826 R identified by match to protein family HMM PF08859; DGC domain superfamily complement(2801380..2801826) Burkholderia pseudomallei MSHR346 7889398 YP_002897558.1 CDS GBP346_A2869 NC_012695.1 2801866 2802345 R hypothetical protein complement(2801866..2802345) Burkholderia pseudomallei MSHR346 7888480 YP_002897559.1 CDS yhbV NC_012695.1 2802401 2803288 R identified by match to protein family HMM PF01136; peptidase, U32 family complement(2802401..2803288) Burkholderia pseudomallei MSHR346 7889893 YP_002897560.1 CDS GBP346_A2871 NC_012695.1 2803329 2804363 R identified by match to protein family HMM PF01136; peptidase, U32 family complement(2803329..2804363) Burkholderia pseudomallei MSHR346 7887858 YP_002897561.1 CDS GBP346_A2872 NC_012695.1 2804360 2804479 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 2-nitropropane dioxygenase complement(2804360..2804479) Burkholderia pseudomallei MSHR346 7889311 YP_002897562.1 CDS GBP346_A2873 NC_012695.1 2804452 2805669 R identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family complement(2804452..2805669) Burkholderia pseudomallei MSHR346 7887609 YP_002897563.1 CDS GBP346_A2875 NC_012695.1 2805835 2807205 D hypothetical protein 2805835..2807205 Burkholderia pseudomallei MSHR346 7887721 YP_002897564.1 CDS GBP346_A2874 NC_012695.1 2807182 2807874 R identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain protein complement(2807182..2807874) Burkholderia pseudomallei MSHR346 7886745 YP_002897565.1 CDS hemN_1 NC_012695.1 2807883 2809334 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(2807883..2809334) Burkholderia pseudomallei MSHR346 7887291 YP_002897566.1 CDS GBP346_A2877 NC_012695.1 2809483 2811405 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein I complement(2809483..2811405) Burkholderia pseudomallei MSHR346 7888161 YP_002897567.1 CDS GBP346_A2878 NC_012695.1 2811541 2811714 D hypothetical protein 2811541..2811714 Burkholderia pseudomallei MSHR346 7889777 YP_002897568.1 CDS GBP346_A2879 NC_012695.1 2811727 2811942 D hypothetical protein 2811727..2811942 Burkholderia pseudomallei MSHR346 7887344 YP_002897569.1 CDS GBP346_A2881 NC_012695.1 2811939 2813135 D identified by match to protein family HMM PF05940; heme/copper membrane protein 2811939..2813135 Burkholderia pseudomallei MSHR346 7886935 YP_002897570.1 CDS GBP346_A2880 NC_012695.1 2813096 2813347 R hypothetical protein complement(2813096..2813347) Burkholderia pseudomallei MSHR346 7888332 YP_002897571.1 CDS sufB NC_012695.1 2813624 2815078 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2813624..2815078 Burkholderia pseudomallei MSHR346 7890935 YP_002897572.1 CDS sufC NC_012695.1 2815108 2815878 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 2815108..2815878 Burkholderia pseudomallei MSHR346 7889778 YP_002897573.1 CDS GBP346_A2884 NC_012695.1 2815883 2817118 D identified by match to protein family HMM PF01458; SufB/sufD domain protein 2815883..2817118 Burkholderia pseudomallei MSHR346 7887954 YP_002897574.1 CDS GBP346_A2885 NC_012695.1 2817111 2818352 D identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01212; cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) 2817111..2818352 Burkholderia pseudomallei MSHR346 7889606 YP_002897575.1 CDS GBP346_A2886 NC_012695.1 2818349 2818840 D identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; SUF system FeS assembly protein, NifU family 2818349..2818840 Burkholderia pseudomallei MSHR346 7890888 YP_002897576.1 CDS sufT NC_012695.1 2818837 2819385 D identified by match to protein family HMM PF01883; match to protein family HMM TIGR03406; probable FeS assembly SUF system protein SufT 2818837..2819385 Burkholderia pseudomallei MSHR346 7886851 YP_002897577.1 CDS GBP346_A2888 NC_012695.1 2819512 2819724 R hypothetical protein complement(2819512..2819724) Burkholderia pseudomallei MSHR346 7889238 YP_002897578.1 CDS GBP346_A2889 NC_012695.1 2819678 2820076 R hypothetical protein complement(2819678..2820076) Burkholderia pseudomallei MSHR346 7890536 YP_002897579.1 CDS GBP346_A2890 NC_012695.1 2820168 2820656 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; putative transcriptional regulator 2820168..2820656 Burkholderia pseudomallei MSHR346 7889915 YP_002897580.1 CDS GBP346_A2891 NC_012695.1 2820874 2821299 R identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; cation-binding hemerythrin HHE family protein complement(2820874..2821299) Burkholderia pseudomallei MSHR346 7887756 YP_002897581.1 CDS GBP346_A2892 NC_012695.1 2821362 2821511 D hypothetical protein 2821362..2821511 Burkholderia pseudomallei MSHR346 7890407 YP_002897582.1 CDS GBP346_A2893 NC_012695.1 2821543 2821668 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; ubiquinol oxidase, subunit II 2821543..2821668 Burkholderia pseudomallei MSHR346 7888731 YP_002897583.1 CDS cyoA NC_012695.1 2821678 2822568 D identified by match to protein family HMM PF00116; match to protein family HMM PF06481; match to protein family HMM TIGR01433; ubiquinol oxidase, subunit II 2821678..2822568 Burkholderia pseudomallei MSHR346 7889367 YP_002897584.1 CDS cyoB_1 NC_012695.1 2822572 2824578 D identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843; cytochrome o ubiquinol oxidase, subunit I 2822572..2824578 Burkholderia pseudomallei MSHR346 7890271 YP_002897585.1 CDS cyoC_1 NC_012695.1 2824578 2825183 D identified by match to protein family HMM PF00510; match to protein family HMM TIGR02842; cytochrome o ubiquinol oxidase, subunit III 2824578..2825183 Burkholderia pseudomallei MSHR346 7886804 YP_002897586.1 CDS cyoD_1 NC_012695.1 2825184 2825516 D identified by match to protein family HMM PF03626; match to protein family HMM TIGR02847; cytochrome o ubiquinol oxidase, subunit IV 2825184..2825516 Burkholderia pseudomallei MSHR346 7889545 YP_002897587.1 CDS GBP346_A2898 NC_012695.1 2825628 2826902 D identified by match to protein family HMM PF00487; fatty acid desaturase family protein 2825628..2826902 Burkholderia pseudomallei MSHR346 7887553 YP_002897588.1 CDS GBP346_A2899 NC_012695.1 2826934 2827104 R hypothetical protein complement(2826934..2827104) Burkholderia pseudomallei MSHR346 7889631 YP_002897589.1 CDS GBP346_A2900 NC_012695.1 2827181 2827975 R identified by match to protein family HMM PF00497; putative lysine-arginine-ornithine-binding periplasmic protein complement(2827181..2827975) Burkholderia pseudomallei MSHR346 7890856 YP_002897590.1 CDS GBP346_A2901 NC_012695.1 2828074 2828739 D identified by match to protein family HMM PF00043; glutathione S-transferase 2828074..2828739 Burkholderia pseudomallei MSHR346 7890630 YP_002897591.1 CDS astE NC_012695.1 2828772 2829821 R catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase complement(2828772..2829821) Burkholderia pseudomallei MSHR346 7889808 YP_002897592.1 CDS astB NC_012695.1 2829805 2831145 R catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase complement(2829805..2831145) Burkholderia pseudomallei MSHR346 7888193 YP_002897593.1 CDS astD NC_012695.1 2831159 2832622 R a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase complement(2831159..2832622) Burkholderia pseudomallei MSHR346 7888237 YP_002897594.1 CDS astA NC_012695.1 2832627 2833658 R identified by match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244; arginine N-succinyltransferase complement(2832627..2833658) Burkholderia pseudomallei MSHR346 7887849 YP_002897595.1 CDS aruF NC_012695.1 2833655 2834713 R identified by match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03245; arginine/ornithine succinyltransferase, alpha subunit complement(2833655..2834713) Burkholderia pseudomallei MSHR346 7887792 YP_002897596.1 CDS argD NC_012695.1 2834758 2835990 R DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein complement(2834758..2835990) Burkholderia pseudomallei MSHR346 7889032 YP_002897597.1 CDS GBP346_A2908 NC_012695.1 2836048 2836407 D putative ion transporter 2836048..2836407 Burkholderia pseudomallei MSHR346 7887328 YP_002897598.1 CDS GBP346_A2909 NC_012695.1 2836730 2837776 R identified by match to protein family HMM PF00165; AraC family regulatory protein complement(2836730..2837776) Burkholderia pseudomallei MSHR346 7890527 YP_002897599.1 CDS GBP346_A2910 NC_012695.1 2837795 2838589 R identified by match to protein family HMM PF00005; arginine/ornithine transport ATP-binding protein AotP complement(2837795..2838589) Burkholderia pseudomallei MSHR346 7889898 YP_002897600.1 CDS GBP346_A2911 NC_012695.1 2838611 2839324 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine ABC transporter, permease protein HisM complement(2838611..2839324) Burkholderia pseudomallei MSHR346 7889235 YP_002897601.1 CDS GBP346_A2912 NC_012695.1 2839321 2840010 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine transport system permease protein HisQ complement(2839321..2840010) Burkholderia pseudomallei MSHR346 7887269 YP_002897602.1 CDS GBP346_A2913 NC_012695.1 2840021 2840182 D hypothetical protein 2840021..2840182 Burkholderia pseudomallei MSHR346 7886713 YP_002897603.1 CDS GBP346_A2914 NC_012695.1 2840326 2840931 R hypothetical protein complement(2840326..2840931) Burkholderia pseudomallei MSHR346 7887760 YP_002897604.1 CDS GBP346_A2915 NC_012695.1 2841635 2842681 R identified by match to protein family HMM TIGR03476; hypothetical protein complement(2841635..2842681) Burkholderia pseudomallei MSHR346 7889971 YP_002897605.1 CDS hpnK NC_012695.1 2842678 2843547 R identified by match to protein family HMM PF04794; match to protein family HMM TIGR03473; hopanoid biosynthesis associated protein HpnK complement(2842678..2843547) Burkholderia pseudomallei MSHR346 7889328 YP_002897606.1 CDS hpnJ NC_012695.1 2843551 2844996 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471; hopanoid biosynthesis associated radical SAM protein HpnJ complement(2843551..2844996) Burkholderia pseudomallei MSHR346 7888382 YP_002897607.1 CDS hpnI_2 NC_012695.1 2845084 2846262 R identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472; hopanoid biosynthesis associated glycosyl transferase protein HpnI complement(2845084..2846262) Burkholderia pseudomallei MSHR346 7889892 YP_002897608.1 CDS GBP346_A2919 NC_012695.1 2846937 2847947 D identified by match to protein family HMM PF00296; match to protein family HMM TIGR03558; luciferase family protein 2846937..2847947 Burkholderia pseudomallei MSHR346 7887714 YP_002897609.1 CDS GBP346_A2920 NC_012695.1 2848450 2849478 R identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein complement(2848450..2849478) Burkholderia pseudomallei MSHR346 7888911 YP_002897610.1 CDS GBP346_A2921 NC_012695.1 2849555 2849977 D hypothetical protein 2849555..2849977 Burkholderia pseudomallei MSHR346 7887115 YP_002897611.1 CDS GBP346_A2922 NC_012695.1 2850013 2850876 D identified by match to protein family HMM TIGR00687; pyridoxal kinase 2850013..2850876 Burkholderia pseudomallei MSHR346 7890313 YP_002897612.1 CDS GBP346_A2923 NC_012695.1 2851279 2851497 R hypothetical protein complement(2851279..2851497) Burkholderia pseudomallei MSHR346 7888182 YP_002897613.1 CDS GBP346_A2924 NC_012695.1 2851519 2853621 D identified by match to protein family HMM PF04185; match to protein family HMM PF05506; match to protein family HMM TIGR01409; match to protein family HMM TIGR03396; phospholipase C, phosphocholine-specific 2851519..2853621 Burkholderia pseudomallei MSHR346 7889859 YP_002897614.1 CDS GBP346_A2926 NC_012695.1 2854429 2855577 D identified by match to protein family HMM PF01094; putative periplasmic substrate-binding protein 2854429..2855577 Burkholderia pseudomallei MSHR346 7889329 YP_002897615.1 CDS GBP346_A2925 NC_012695.1 2855529 2855666 R hypothetical protein complement(2855529..2855666) Burkholderia pseudomallei MSHR346 7889964 YP_002897616.1 CDS GBP346_A2927 NC_012695.1 2855676 2856848 D identified by match to protein family HMM PF01266; oxidoreductase, FAD-binding family protein 2855676..2856848 Burkholderia pseudomallei MSHR346 7887610 YP_002897617.1 CDS GBP346_A2928 NC_012695.1 2857004 2857465 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2857004..2857465) Burkholderia pseudomallei MSHR346 7887990 YP_002897618.1 CDS GBP346_A2929 NC_012695.1 2857521 2858492 R hypothetical protein complement(2857521..2858492) Burkholderia pseudomallei MSHR346 7888893 YP_002897619.1 CDS GBP346_A2930 NC_012695.1 2858759 2859823 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family complement(2858759..2859823) Burkholderia pseudomallei MSHR346 7887121 YP_002897620.1 CDS GBP346_A2932 NC_012695.1 2860271 2860387 D hypothetical protein 2860271..2860387 Burkholderia pseudomallei MSHR346 7889750 YP_002897621.1 CDS GBP346_A2931 NC_012695.1 2860372 2860503 R hypothetical protein complement(2860372..2860503) Burkholderia pseudomallei MSHR346 7888122 YP_002897622.1 CDS GBP346_A2933 NC_012695.1 2860390 2862255 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; putative ABC transporter, permease/ATP-binding protein 2860390..2862255 Burkholderia pseudomallei MSHR346 7889113 YP_002897623.1 CDS otsA_2 NC_012695.1 2862317 2863693 R identified by match to protein family HMM PF00982; match to protein family HMM TIGR02400; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(2862317..2863693) Burkholderia pseudomallei MSHR346 7888510 YP_002897624.1 CDS otsB NC_012695.1 2863690 2864442 R identified by match to protein family HMM PF02358; match to protein family HMM PF08282; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; trehalose-phosphatase complement(2863690..2864442) Burkholderia pseudomallei MSHR346 7886925 YP_002897625.1 CDS GBP346_A2937 NC_012695.1 2864432 2864653 D hypothetical protein 2864432..2864653 Burkholderia pseudomallei MSHR346 7887258 YP_002897626.1 CDS GBP346_A2936 NC_012695.1 2864635 2864895 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(2864635..2864895) Burkholderia pseudomallei MSHR346 7887580 YP_002897627.1 CDS GBP346_A2938 NC_012695.1 2864876 2865535 D identified by match to protein family HMM PF02630; SCO1/SenC family protein 2864876..2865535 Burkholderia pseudomallei MSHR346 7890430 YP_002897628.1 CDS GBP346_A2939 NC_012695.1 2865562 2866008 D identified by match to protein family HMM PF04314; hypothetical protein 2865562..2866008 Burkholderia pseudomallei MSHR346 7887661 YP_002897629.1 CDS GBP346_A2940 NC_012695.1 2866019 2866891 D identified by match to protein family HMM PF09678; membrane protein 2866019..2866891 Burkholderia pseudomallei MSHR346 7890134 YP_002897630.1 CDS GBP346_A2941 NC_012695.1 2867026 2867703 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(2867026..2867703) Burkholderia pseudomallei MSHR346 7888965 YP_002897631.1 CDS GBP346_A2942 NC_012695.1 2867743 2868609 R identified by match to protein family HMM PF02678; match to protein family HMM PF05726; pirin domain protein complement(2867743..2868609) Burkholderia pseudomallei MSHR346 7889501 YP_002897632.1 CDS GBP346_A2943 NC_012695.1 2868736 2869644 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2868736..2869644 Burkholderia pseudomallei MSHR346 7889851 YP_002897633.1 CDS GBP346_A2944 NC_012695.1 2869715 2870323 D GAF domain protein 2869715..2870323 Burkholderia pseudomallei MSHR346 7887091 YP_002897634.1 CDS pgsA NC_012695.1 2872026 2872649 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2872026..2872649) Burkholderia pseudomallei MSHR346 7889202 YP_002897635.1 CDS uvrC NC_012695.1 2872747 2874990 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(2872747..2874990) Burkholderia pseudomallei MSHR346 7889600 YP_002897636.1 CDS GBP346_A2950 NC_012695.1 2874993 2875157 R hypothetical protein complement(2874993..2875157) Burkholderia pseudomallei MSHR346 7887505 YP_002897637.1 CDS GBP346_A2951 NC_012695.1 2875205 2876425 D hypothetical protein 2875205..2876425 Burkholderia pseudomallei MSHR346 7888591 YP_002897638.1 CDS efp NC_012695.1 2876615 2877172 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2876615..2877172 Burkholderia pseudomallei MSHR346 7889075 YP_002897639.1 CDS GBP346_A2953 NC_012695.1 2877225 2877365 R hypothetical protein complement(2877225..2877365) Burkholderia pseudomallei MSHR346 7889621 YP_002897640.1 CDS GBP346_A2954 NC_012695.1 2877443 2878840 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent DNA-binding response regulator, Fis family 2877443..2878840 Burkholderia pseudomallei MSHR346 7886815 YP_002897641.1 CDS GBP346_A2955 NC_012695.1 2878954 2879982 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(2878954..2879982) Burkholderia pseudomallei MSHR346 7887957 YP_002897642.1 CDS acpS NC_012695.1 2880010 2880441 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2880010..2880441) Burkholderia pseudomallei MSHR346 7889847 YP_002897643.1 CDS pdxJ NC_012695.1 2880447 2881220 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2880447..2881220) Burkholderia pseudomallei MSHR346 7887094 YP_002897644.1 CDS recO NC_012695.1 2881217 2882044 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(2881217..2882044) Burkholderia pseudomallei MSHR346 7890719 YP_002897645.1 CDS era NC_012695.1 2882064 2882963 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(2882064..2882963) Burkholderia pseudomallei MSHR346 7889333 YP_002897646.1 CDS GBP346_A2960 NC_012695.1 2883033 2884436 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2883033..2884436) Burkholderia pseudomallei MSHR346 7890496 YP_002897647.1 CDS lepB NC_012695.1 2884587 2885480 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(2884587..2885480) Burkholderia pseudomallei MSHR346 7889965 YP_002897648.1 CDS lepA NC_012695.1 2885496 2887289 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2885496..2887289) Burkholderia pseudomallei MSHR346 7887749 YP_002897649.1 CDS GBP346_A2963 NC_012695.1 2887530 2887784 R identified by match to protein family HMM PF05768; hypothetical protein complement(2887530..2887784) Burkholderia pseudomallei MSHR346 7889524 YP_002897650.1 CDS GBP346_A2964 NC_012695.1 2887781 2889289 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; putative serine protease MucD complement(2887781..2889289) Burkholderia pseudomallei MSHR346 7890779 YP_002897651.1 CDS GBP346_A2965 NC_012695.1 2889306 2890349 R identified by match to protein family HMM PF03888; sigma factor negative regulatory protein, MucB/ResB family complement(2889306..2890349) Burkholderia pseudomallei MSHR346 7888455 YP_002897652.1 CDS GBP346_A2966 NC_012695.1 2890364 2891002 R identified by match to protein family HMM PF03872; sigma factor negative regulatory protein, RseA family complement(2890364..2891002) Burkholderia pseudomallei MSHR346 7888232 YP_002897653.1 CDS rpoE NC_012695.1 2891050 2891649 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(2891050..2891649) Burkholderia pseudomallei MSHR346 7889774 YP_002897654.1 CDS GBP346_A2968 NC_012695.1 2891755 2892228 R hypothetical protein complement(2891755..2892228) Burkholderia pseudomallei MSHR346 7887215 YP_002897655.1 CDS fabF NC_012695.1 2892240 2893478 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(2892240..2893478) Burkholderia pseudomallei MSHR346 7890682 YP_002897656.1 CDS acpP NC_012695.1 2893635 2893874 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2893635..2893874) Burkholderia pseudomallei MSHR346 7890634 YP_002897657.1 CDS fabG NC_012695.1 2894018 2894767 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(2894018..2894767) Burkholderia pseudomallei MSHR346 7888135 YP_002897658.1 CDS fabD_1 NC_012695.1 2894818 2895750 R identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase complement(2894818..2895750) Burkholderia pseudomallei MSHR346 7889467 YP_002897659.1 CDS GBP346_A2973 NC_012695.1 2895821 2896810 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(2895821..2896810) Burkholderia pseudomallei MSHR346 7888955 YP_002897660.1 CDS plsX NC_012695.1 2896810 2897916 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(2896810..2897916) Burkholderia pseudomallei MSHR346 7889784 YP_002897661.1 CDS rpmF NC_012695.1 2898056 2898235 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2898056..2898235) Burkholderia pseudomallei MSHR346 7887566 YP_002897662.1 CDS GBP346_A2976 NC_012695.1 2898332 2898964 R identified by match to protein family HMM PF02620; hypothetical protein complement(2898332..2898964) Burkholderia pseudomallei MSHR346 7890424 YP_002897663.1 CDS maf_2 NC_012695.1 2899208 2899855 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2899208..2899855 Burkholderia pseudomallei MSHR346 7890942 YP_002897664.1 CDS GBP346_A2978 NC_012695.1 2899852 2900574 D identified by match to protein family HMM PF00590; tetrapyrrole methylase family protein 2899852..2900574 Burkholderia pseudomallei MSHR346 7887980 YP_002897665.1 CDS GBP346_A2979 NC_012695.1 2900613 2901530 R identified by match to protein family HMM PF01343; peptidase, U7 family protein complement(2900613..2901530) Burkholderia pseudomallei MSHR346 7887523 YP_002897666.1 CDS GBP346_A2980 NC_012695.1 2901624 2902019 R identified by match to protein family HMM PF00355; iron-sulfur cluster-binding protein, Rieske family complement(2901624..2902019) Burkholderia pseudomallei MSHR346 7886959 YP_002897667.1 CDS GBP346_A2981 NC_012695.1 2902016 2902675 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase complement(2902016..2902675) Burkholderia pseudomallei MSHR346 7886780 YP_002897668.1 CDS GBP346_A2982 NC_012695.1 2902681 2903688 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; pseudouridine synthase, RluA family complement(2902681..2903688) Burkholderia pseudomallei MSHR346 7887494 YP_002897669.1 CDS GBP346_A2983 NC_012695.1 2904411 2907677 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease E 2904411..2907677 Burkholderia pseudomallei MSHR346 7888693 YP_002897670.1 CDS moaA NC_012695.1 2907796 2908929 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2907796..2908929 Burkholderia pseudomallei MSHR346 7889029 YP_002897671.1 CDS mobA NC_012695.1 2908944 2909585 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2908944..2909585 Burkholderia pseudomallei MSHR346 7887805 YP_002897672.1 CDS GBP346_A2985 NC_012695.1 2909537 2909713 R identified by glimmer; putative; hypothetical protein complement(2909537..2909713) Burkholderia pseudomallei MSHR346 7888310 YP_002897673.1 CDS GBP346_A2987 NC_012695.1 2909697 2910995 D identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 2909697..2910995 Burkholderia pseudomallei MSHR346 7890740 YP_002897674.1 CDS GBP346_A2988 NC_012695.1 2911032 2911319 D hypothetical protein 2911032..2911319 Burkholderia pseudomallei MSHR346 7889674 YP_002897675.1 CDS GBP346_A2989 NC_012695.1 2911316 2911819 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2911316..2911819 Burkholderia pseudomallei MSHR346 7888630 YP_002897676.1 CDS GBP346_A2990 NC_012695.1 2912054 2913529 R identified by match to protein family HMM PF02646; RmuC domain protein complement(2912054..2913529) Burkholderia pseudomallei MSHR346 7887585 YP_002897677.1 CDS GBP346_A2991 NC_012695.1 2913526 2914584 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase (Glycolate reductase) complement(2913526..2914584) Burkholderia pseudomallei MSHR346 7887853 YP_002897678.1 CDS GBP346_A2992 NC_012695.1 2914581 2916089 R putative transporter complement(2914581..2916089) Burkholderia pseudomallei MSHR346 7887499 YP_002897679.1 CDS GBP346_A2993 NC_012695.1 2916079 2916741 R identified by match to protein family HMM PF02589; hypothetical protein complement(2916079..2916741) Burkholderia pseudomallei MSHR346 7886944 YP_002897680.1 CDS pncB_2 NC_012695.1 2916886 2918085 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(2916886..2918085) Burkholderia pseudomallei MSHR346 7888093 YP_002897681.1 CDS GBP346_A2995 NC_012695.1 2918170 2918436 D hypothetical protein 2918170..2918436 Burkholderia pseudomallei MSHR346 7889306 YP_002897682.1 CDS GBP346_A2996 NC_012695.1 2918354 2918677 D identified by match to protein family HMM PF00037; ferredoxin 2918354..2918677 Burkholderia pseudomallei MSHR346 7890288 YP_002897683.1 CDS GBP346_A2999 NC_012695.1 2919165 2919644 D identified by match to protein family HMM PF05981; CreA protein 2919165..2919644 Burkholderia pseudomallei MSHR346 7889167 YP_002897684.1 CDS GBP346_A3000 NC_012695.1 2919840 2920001 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABA49716.1; hypothetical protein 2919840..2920001 Burkholderia pseudomallei MSHR346 7890068 YP_002897685.1 CDS GBP346_A3001 NC_012695.1 2920064 2920966 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABA49716.1; hypothetical protein 2920064..2920966 Burkholderia pseudomallei MSHR346 7888695 YP_002897686.1 CDS GBP346_A3002 NC_012695.1 2921151 2921657 R hypothetical protein complement(2921151..2921657) Burkholderia pseudomallei MSHR346 7888706 YP_002897687.1 CDS GBP346_A3003 NC_012695.1 2921714 2921875 R hypothetical protein complement(2921714..2921875) Burkholderia pseudomallei MSHR346 7887634 YP_002897688.1 CDS GBP346_A3004 NC_012695.1 2921995 2922216 D hypothetical protein 2921995..2922216 Burkholderia pseudomallei MSHR346 7890858 YP_002897689.1 CDS GBP346_A3005 NC_012695.1 2922341 2923747 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug resistance protein NorM (Multidrug-efflux transporter) 2922341..2923747 Burkholderia pseudomallei MSHR346 7887292 YP_002897690.1 CDS GBP346_A3006 NC_012695.1 2924189 2924362 R hypothetical protein complement(2924189..2924362) Burkholderia pseudomallei MSHR346 7887297 YP_002897691.1 CDS fumC NC_012695.1 2924377 2925771 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2924377..2925771 Burkholderia pseudomallei MSHR346 7889045 YP_002897692.1 CDS GBP346_A3008 NC_012695.1 2926258 2926764 R identified by match to protein family HMM PF03061; thioesterase family protein complement(2926258..2926764) Burkholderia pseudomallei MSHR346 7887669 YP_002897693.1 CDS GBP346_A3009 NC_012695.1 2926946 2927086 R hypothetical protein complement(2926946..2927086) Burkholderia pseudomallei MSHR346 7886908 YP_002897694.1 CDS GBP346_A3010 NC_012695.1 2927068 2927298 D hypothetical protein 2927068..2927298 Burkholderia pseudomallei MSHR346 7887618 YP_002897695.1 CDS GBP346_A3011 NC_012695.1 2927667 2928377 D identified by match to protein family HMM PF01022; transcriptional regulator, ArsR family 2927667..2928377 Burkholderia pseudomallei MSHR346 7887392 YP_002897696.1 CDS GBP346_A3012 NC_012695.1 2928539 2931112 D hypothetical protein 2928539..2931112 Burkholderia pseudomallei MSHR346 7888885 YP_002897697.1 CDS thyA NC_012695.1 2931202 2932173 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(2931202..2932173) Burkholderia pseudomallei MSHR346 7887316 YP_002897698.1 CDS GBP346_A3014 NC_012695.1 2932230 2933615 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator, Fis family complement(2932230..2933615) Burkholderia pseudomallei MSHR346 7886970 YP_002897699.1 CDS GBP346_A3015 NC_012695.1 2933577 2933873 D hypothetical protein 2933577..2933873 Burkholderia pseudomallei MSHR346 7888269 YP_002897700.1 CDS GBP346_A3016 NC_012695.1 2934114 2934350 R hypothetical protein complement(2934114..2934350) Burkholderia pseudomallei MSHR346 7888178 YP_002897701.1 CDS GBP346_A3017 NC_012695.1 2934357 2934506 D hypothetical protein 2934357..2934506 Burkholderia pseudomallei MSHR346 7887684 YP_002897702.1 CDS GBP346_A3018 NC_012695.1 2934663 2934848 D hypothetical protein 2934663..2934848 Burkholderia pseudomallei MSHR346 7889290 YP_002897703.1 CDS GBP346_A3019 NC_012695.1 2935291 2935623 R hypothetical protein complement(2935291..2935623) Burkholderia pseudomallei MSHR346 7890290 YP_002897704.1 CDS GBP346_A3020 NC_012695.1 2935663 2936370 R hypothetical protein complement(2935663..2936370) Burkholderia pseudomallei MSHR346 7888947 YP_002897705.1 CDS GBP346_A3021 NC_012695.1 2936435 2937895 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator, Fis family 2936435..2937895 Burkholderia pseudomallei MSHR346 7887671 YP_002897706.1 CDS folA NC_012695.1 2938103 2938606 D identified by match to protein family HMM PF00186; dihydrofolate reductase 2938103..2938606 Burkholderia pseudomallei MSHR346 7888403 YP_002897707.1 CDS GBP346_A3023 NC_012695.1 2938734 2940215 R identified by match to protein family HMM PF01609; ISBma2, transposase complement(2938734..2940215) Burkholderia pseudomallei MSHR346 7890614 YP_002897708.1 CDS GBP346_A3024 NC_012695.1 2940333 2941703 R identified by match to protein family HMM PF01523; TldD/PmbA family protein complement(2940333..2941703) Burkholderia pseudomallei MSHR346 7888589 YP_002897709.1 CDS GBP346_A3025 NC_012695.1 2941765 2941914 R hypothetical protein complement(2941765..2941914) Burkholderia pseudomallei MSHR346 7889972 YP_002897710.1 CDS GBP346_A3026 NC_012695.1 2941849 2942457 D identified by match to protein family HMM PF04751; hypothetical protein 2941849..2942457 Burkholderia pseudomallei MSHR346 7890280 YP_002897711.1 CDS mogA NC_012695.1 2942474 2943058 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 2942474..2943058 Burkholderia pseudomallei MSHR346 7886843 YP_002897712.1 CDS GBP346_A3028 NC_012695.1 2943340 2943945 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(2943340..2943945) Burkholderia pseudomallei MSHR346 7890061 YP_002897713.1 CDS GBP346_A3029 NC_012695.1 2944064 2945323 D identified by match to protein family HMM PF01435; peptidase, M48 family 2944064..2945323 Burkholderia pseudomallei MSHR346 7888705 YP_002897714.1 CDS rsgA NC_012695.1 2945320 2946264 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 2945320..2946264 Burkholderia pseudomallei MSHR346 7888670 YP_002897715.1 CDS GBP346_A3031 NC_012695.1 2946333 2946650 D putative lipoprotein 2946333..2946650 Burkholderia pseudomallei MSHR346 7889043 YP_002897716.1 CDS GBP346_A3032 NC_012695.1 2946817 2947806 R identified by match to protein family HMM PF03186; CobD/CbiB family protein complement(2946817..2947806) Burkholderia pseudomallei MSHR346 7889770 YP_002897717.1 CDS GBP346_A3033 NC_012695.1 2947856 2948806 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family complement(2947856..2948806) Burkholderia pseudomallei MSHR346 7888233 YP_002897718.1 CDS GBP346_A3034 NC_012695.1 2948819 2949025 D hypothetical protein 2948819..2949025 Burkholderia pseudomallei MSHR346 7890565 YP_002897719.1 CDS GBP346_A3035 NC_012695.1 2949482 2950072 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2949482..2950072 Burkholderia pseudomallei MSHR346 7890700 YP_002897720.1 CDS rplS NC_012695.1 2950381 2950770 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2950381..2950770) Burkholderia pseudomallei MSHR346 7888825 YP_002897721.1 CDS trmD NC_012695.1 2950908 2951702 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2950908..2951702) Burkholderia pseudomallei MSHR346 7888940 YP_002897722.1 CDS rimM NC_012695.1 2951704 2952393 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2951704..2952393) Burkholderia pseudomallei MSHR346 7889041 YP_002897723.1 CDS rpsP NC_012695.1 2952438 2952692 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2952438..2952692) Burkholderia pseudomallei MSHR346 7888666 YP_002897724.1 CDS GBP346_A3040 NC_012695.1 2952857 2954026 D putative L-sorbosone dehydrogenase homolog 2952857..2954026 Burkholderia pseudomallei MSHR346 7887047 YP_002897725.1 CDS GBP346_A3042 NC_012695.1 2954133 2954600 D hypothetical protein 2954133..2954600 Burkholderia pseudomallei MSHR346 7887267 YP_002897726.1 CDS GBP346_A3041 NC_012695.1 2954594 2955790 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF04055; radical SAM domain protein complement(2954594..2955790) Burkholderia pseudomallei MSHR346 7889957 YP_002897727.1 CDS GBP346_A3043 NC_012695.1 2955899 2956387 R identified by match to protein family HMM PF01037; leucine-responsive regulatory protein complement(2955899..2956387) Burkholderia pseudomallei MSHR346 7888634 YP_002897728.1 CDS GBP346_A3044 NC_012695.1 2956535 2957821 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2956535..2957821 Burkholderia pseudomallei MSHR346 7888565 YP_002897729.1 CDS GBP346_A3045 NC_012695.1 2957936 2959726 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2957936..2959726) Burkholderia pseudomallei MSHR346 7886747 YP_002897730.1 CDS GBP346_A3046 NC_012695.1 2959840 2960775 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha (alpha-etf) (electrontransfer flavoprotein large subunit) (etfls) complement(2959840..2960775) Burkholderia pseudomallei MSHR346 7889583 YP_002897731.1 CDS GBP346_A3047 NC_012695.1 2960791 2961546 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta (beta-etf) (electrontransfer flavoprotein small subunit) (etfss) complement(2960791..2961546) Burkholderia pseudomallei MSHR346 7890203 YP_002897732.1 CDS metQ NC_012695.1 2961767 2962552 R identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; D-methionine ABC transporter, periplasmic D-methionine-binding protein complement(2961767..2962552) Burkholderia pseudomallei MSHR346 7887808 YP_002897733.1 CDS GBP346_A3049 NC_012695.1 2962641 2963294 R identified by match to protein family HMM PF00528; D-methionine transport system permease protein MetI complement(2962641..2963294) Burkholderia pseudomallei MSHR346 7889617 YP_002897734.1 CDS metN NC_012695.1 2963284 2964318 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(2963284..2964318) Burkholderia pseudomallei MSHR346 7888275 YP_002897735.1 CDS GBP346_A3051 NC_012695.1 2964626 2965468 D identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 2964626..2965468 Burkholderia pseudomallei MSHR346 7889822 YP_002897736.1 CDS GBP346_A3052 NC_012695.1 2965811 2966734 R identified by match to protein family HMM PF00850; histone deacetylase family protein complement(2965811..2966734) Burkholderia pseudomallei MSHR346 7887245 YP_002897737.1 CDS mltB NC_012695.1 2966913 2968202 D identified by match to protein family HMM TIGR02282; lytic murein transglycosylase B 2966913..2968202 Burkholderia pseudomallei MSHR346 7889890 YP_002897738.1 CDS cysM NC_012695.1 2968429 2969340 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(2968429..2969340) Burkholderia pseudomallei MSHR346 7890286 YP_002897739.1 CDS GBP346_A3055 NC_012695.1 2969658 2969975 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; competence protein ComE complement(2969658..2969975) Burkholderia pseudomallei MSHR346 7887400 YP_002897740.1 CDS rfaD NC_012695.1 2970047 2971039 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197; ADP-glyceromanno-heptose 6-epimerase complement(2970047..2971039) Burkholderia pseudomallei MSHR346 7887719 YP_002897741.1 CDS rfaE_2 NC_012695.1 2971098 2972084 R identified by match to protein family HMM PF00294; match to protein family HMM TIGR02198; bifunctional protein RfaE, domain I complement(2971098..2972084) Burkholderia pseudomallei MSHR346 7890618 YP_002897742.1 CDS GBP346_A3058 NC_012695.1 2972053 2973453 R identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase complement(2972053..2973453) Burkholderia pseudomallei MSHR346 7887935 YP_002897743.1 CDS GBP346_A3059 NC_012695.1 2973574 2974743 R identified by match to protein family HMM PF00515; tetratricopeptide repeat protein complement(2973574..2974743) Burkholderia pseudomallei MSHR346 7890936 YP_002897744.1 CDS GBP346_A3060 NC_012695.1 2974796 2975317 R hypothetical protein complement(2974796..2975317) Burkholderia pseudomallei MSHR346 7886841 YP_002897745.1 CDS ihfB NC_012695.1 2975314 2975637 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(2975314..2975637) Burkholderia pseudomallei MSHR346 7890296 YP_002897746.1 CDS rpsA NC_012695.1 2975660 2977372 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2975660..2977372) Burkholderia pseudomallei MSHR346 7888091 YP_002897747.1 CDS cmk NC_012695.1 2977517 2978203 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(2977517..2978203) Burkholderia pseudomallei MSHR346 7887144 YP_002897748.1 CDS aroA NC_012695.1 2978224 2980473 R fusion of tyrA/aroA; bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase complement(2978224..2980473) Burkholderia pseudomallei MSHR346 7889417 YP_002897749.1 CDS pheA NC_012695.1 2980712 2981794 R identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807; chorismate mutase/prephenate dehydratase complement(2980712..2981794) Burkholderia pseudomallei MSHR346 7889360 YP_002897750.1 CDS serC NC_012695.1 2981829 2983007 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2981829..2983007) Burkholderia pseudomallei MSHR346 7890564 YP_002897751.1 CDS GBP346_A3067 NC_012695.1 2983085 2983681 R hypothetical protein complement(2983085..2983681) Burkholderia pseudomallei MSHR346 7887102 YP_002897752.1 CDS gyrA NC_012695.1 2983782 2986448 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(2983782..2986448) Burkholderia pseudomallei MSHR346 7889402 YP_002897753.1 CDS GBP346_A3069 NC_012695.1 2986374 2986502 D identified by glimmer; putative; hypothetical protein 2986374..2986502 Burkholderia pseudomallei MSHR346 7890137 YP_002897754.1 CDS GBP346_A3070 NC_012695.1 2986892 2987566 D identified by match to protein family HMM PF00691; OmpA family protein 2986892..2987566 Burkholderia pseudomallei MSHR346 7887049 YP_002897755.1 CDS ubiG NC_012695.1 2987690 2988433 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2987690..2988433 Burkholderia pseudomallei MSHR346 7890941 YP_002897756.1 CDS gph_1 NC_012695.1 2988459 2989184 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 2988459..2989184 Burkholderia pseudomallei MSHR346 7887979 YP_002897757.1 CDS GBP346_A3075 NC_012695.1 2989759 2990997 D identified by match to protein family HMM PF00589; integrase 2989759..2990997 Burkholderia pseudomallei MSHR346 7887080 YP_002897758.1 CDS GBP346_A3076 NC_012695.1 2991049 2991219 D identified by glimmer; putative; hypothetical protein 2991049..2991219 Burkholderia pseudomallei MSHR346 7889282 YP_002897759.1 CDS GBP346_A3077 NC_012695.1 2991850 2994699 R identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family complement(2991850..2994699) Burkholderia pseudomallei MSHR346 7887120 YP_002897760.1 CDS GBP346_A3078 NC_012695.1 2994811 2995065 R identified by glimmer; putative; hypothetical protein complement(2994811..2995065) Burkholderia pseudomallei MSHR346 7887731 YP_002897761.1 CDS GBP346_A3079 NC_012695.1 2995244 2995588 R hypothetical protein complement(2995244..2995588) Burkholderia pseudomallei MSHR346 7887631 YP_002897762.1 CDS GBP346_A3080 NC_012695.1 2995585 2995842 R hypothetical protein complement(2995585..2995842) Burkholderia pseudomallei MSHR346 7890323 YP_002897763.1 CDS GBP346_A3081 NC_012695.1 2995835 2996011 R hypothetical protein complement(2995835..2996011) Burkholderia pseudomallei MSHR346 7887229 YP_002897764.1 CDS GBP346_A3082 NC_012695.1 2996373 2996642 R hypothetical protein complement(2996373..2996642) Burkholderia pseudomallei MSHR346 7890892 YP_002897765.1 CDS GBP346_A3083 NC_012695.1 2996642 2996905 R identified by match to protein family HMM PF05930; phage transcriptional regulator, AlpA complement(2996642..2996905) Burkholderia pseudomallei MSHR346 7890364 YP_002897766.1 CDS GBP346_A3084 NC_012695.1 2997008 2997673 R hypothetical protein complement(2997008..2997673) Burkholderia pseudomallei MSHR346 7889363 YP_002897767.1 CDS GBP346_A3085 NC_012695.1 2998211 2999785 R identified by match to protein family HMM PF03235; hypothetical protein complement(2998211..2999785) Burkholderia pseudomallei MSHR346 7887021 YP_002897768.1 CDS GBP346_A3086 NC_012695.1 3000243 3000851 D hypothetical protein 3000243..3000851 Burkholderia pseudomallei MSHR346 7888753 YP_002897769.1 CDS GBP346_A3087 NC_012695.1 3000943 3001548 D hypothetical protein 3000943..3001548 Burkholderia pseudomallei MSHR346 7887410 YP_002897770.1 CDS GBP346_A3088 NC_012695.1 3001617 3001733 R identified by glimmer; putative; hypothetical protein complement(3001617..3001733) Burkholderia pseudomallei MSHR346 7886762 YP_002897771.1 CDS GBP346_A3089 NC_012695.1 3002041 3002187 R identified by glimmer; putative; hypothetical protein complement(3002041..3002187) Burkholderia pseudomallei MSHR346 7890373 YP_002897772.1 CDS GBP346_A3090 NC_012695.1 3002227 3002721 D hypothetical protein 3002227..3002721 Burkholderia pseudomallei MSHR346 7890937 YP_002897773.1 CDS GBP346_A3091 NC_012695.1 3002834 3002953 D identified by glimmer; putative; hypothetical protein 3002834..3002953 Burkholderia pseudomallei MSHR346 7890435 YP_002897774.1 CDS GBP346_A3092 NC_012695.1 3003106 3003204 R identified by glimmer; putative; hypothetical protein complement(3003106..3003204) Burkholderia pseudomallei MSHR346 7889431 YP_002897775.1 CDS GBP346_A3093 NC_012695.1 3003145 3003720 D identified by match to protein family HMM PF00239; match to protein family HMM PF02796; resolvase, N domain protein 3003145..3003720 Burkholderia pseudomallei MSHR346 7889350 YP_002897776.1 CDS GBP346_A3094 NC_012695.1 3004202 3004414 D hypothetical protein 3004202..3004414 Burkholderia pseudomallei MSHR346 7890265 YP_002897777.1 CDS pmtA NC_012695.1 3004496 3005140 D identified by match to protein family HMM PF08242; phospholipid N-methyltransferase PmtA 3004496..3005140 Burkholderia pseudomallei MSHR346 7886838 YP_002897778.1 CDS GBP346_A3096 NC_012695.1 3005321 3005584 R hypothetical protein complement(3005321..3005584) Burkholderia pseudomallei MSHR346 7890943 YP_002897779.1 CDS GBP346_A3097 NC_012695.1 3005686 3006765 R identified by match to protein family HMM PF00126; molybdate transport repressor domain protein complement(3005686..3006765) Burkholderia pseudomallei MSHR346 7889786 YP_002897780.1 CDS GBP346_A3098 NC_012695.1 3006766 3006891 D hypothetical protein 3006766..3006891 Burkholderia pseudomallei MSHR346 7887460 YP_002897781.1 CDS GBP346_A3099 NC_012695.1 3006923 3007396 D NAD-dependent formate dehydrogenase gamma subunit 3006923..3007396 Burkholderia pseudomallei MSHR346 7888214 YP_002897782.1 CDS GBP346_A3100 NC_012695.1 3007393 3008958 D identified by match to protein family HMM PF01512; NAD-dependent formate dehydrogenase beta subunit 3007393..3008958 Burkholderia pseudomallei MSHR346 7890308 YP_002897783.1 CDS GBP346_A3101 NC_012695.1 3008973 3011927 D identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591; formate dehydrogenase, alpha subunit 3008973..3011927 Burkholderia pseudomallei MSHR346 7888045 YP_002897784.1 CDS GBP346_A3102 NC_012695.1 3011935 3012195 D formate dehydrogenase, delta subunit 3011935..3012195 Burkholderia pseudomallei MSHR346 7887521 YP_002897785.1 CDS GBP346_A3103 NC_012695.1 3012510 3014156 R identified by match to protein family HMM PF01494; FAD-dependent oxidoreductase complement(3012510..3014156) Burkholderia pseudomallei MSHR346 7887454 YP_002897786.1 CDS GBP346_A3104 NC_012695.1 3014310 3016154 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; tetratricopeptide repeat protein 3014310..3016154 Burkholderia pseudomallei MSHR346 7888655 YP_002897787.1 CDS GBP346_A3105 NC_012695.1 3016167 3016379 D hypothetical protein 3016167..3016379 Burkholderia pseudomallei MSHR346 7888197 YP_002897788.1 CDS GBP346_A3106 NC_012695.1 3016543 3017895 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; citrate-proton symporter complement(3016543..3017895) Burkholderia pseudomallei MSHR346 7887703 YP_002897789.1 CDS GBP346_A3107 NC_012695.1 3018136 3018273 R identified by glimmer; putative; hypothetical protein complement(3018136..3018273) Burkholderia pseudomallei MSHR346 7890727 YP_002897790.1 CDS GBP346_A3108 NC_012695.1 3018327 3019655 R identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase, class I complement(3018327..3019655) Burkholderia pseudomallei MSHR346 7890793 YP_002897791.1 CDS GBP346_A3110 NC_012695.1 3019654 3019797 D hypothetical protein 3019654..3019797 Burkholderia pseudomallei MSHR346 7888975 YP_002897792.1 CDS GBP346_A3109 NC_012695.1 3019774 3019989 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3019774..3019989) Burkholderia pseudomallei MSHR346 7888134 YP_002897793.1 CDS GBP346_A3111 NC_012695.1 3019945 3021636 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3019945..3021636 Burkholderia pseudomallei MSHR346 7889858 YP_002897794.1 CDS GBP346_A3112 NC_012695.1 3021745 3022254 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3021745..3022254 Burkholderia pseudomallei MSHR346 7886872 YP_002897795.1 CDS GBP346_A3113 NC_012695.1 3022450 3022824 R hypothetical protein complement(3022450..3022824) Burkholderia pseudomallei MSHR346 7890448 YP_002897796.1 CDS xdhC NC_012695.1 3022795 3023817 D identified by match to protein family HMM PF02625; match to protein family HMM TIGR02964; xanthine dehydrogenase accessory protein XdhC 3022795..3023817 Burkholderia pseudomallei MSHR346 7889797 YP_002897797.1 CDS add NC_012695.1 3023859 3024884 D catalyzes the formation of inosine from adenosine; adenosine deaminase 3023859..3024884 Burkholderia pseudomallei MSHR346 7887739 YP_002897798.1 CDS GBP346_A3116 NC_012695.1 3024910 3026358 D identified by match to protein family HMM PF00860; xanthine/uracil permease family protein 3024910..3026358 Burkholderia pseudomallei MSHR346 7889511 YP_002897799.1 CDS guaD NC_012695.1 3026384 3027694 D Catalyzes the deamination of guanine; guanine deaminase 3026384..3027694 Burkholderia pseudomallei MSHR346 7887467 YP_002897800.1 CDS GBP346_A3119 NC_012695.1 3027775 3028185 D probable multidrug resistance 1 hypothetical protein 3027775..3028185 Burkholderia pseudomallei MSHR346 7888339 YP_002897801.1 CDS GBP346_A3120 NC_012695.1 3028182 3028754 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01169; integral membrane protein 3028182..3028754 Burkholderia pseudomallei MSHR346 7886926 YP_002897802.1 CDS GBP346_A3121 NC_012695.1 3029088 3029801 R putative lipoprotein complement(3029088..3029801) Burkholderia pseudomallei MSHR346 7887159 YP_002897803.1 CDS GBP346_A3122 NC_012695.1 3029860 3029997 R hypothetical protein complement(3029860..3029997) Burkholderia pseudomallei MSHR346 7889133 YP_002897804.1 CDS pepN NC_012695.1 3030022 3032724 D identified by match to protein family HMM PF01433; match to protein family HMM TIGR02414; aminopeptidase N 3030022..3032724 Burkholderia pseudomallei MSHR346 7890408 YP_002897805.1 CDS GBP346_A3124 NC_012695.1 3032822 3032962 R hypothetical protein complement(3032822..3032962) Burkholderia pseudomallei MSHR346 7887577 YP_002897806.1 CDS metE NC_012695.1 3033062 3035356 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(3033062..3035356) Burkholderia pseudomallei MSHR346 7890412 YP_002897807.1 CDS GBP346_A3126 NC_012695.1 3035342 3035476 D identified by glimmer; putative; hypothetical protein 3035342..3035476 Burkholderia pseudomallei MSHR346 7890831 YP_002897808.1 CDS metR NC_012695.1 3035473 3036405 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional activator MetR 3035473..3036405 Burkholderia pseudomallei MSHR346 7889423 YP_002897809.1 CDS fbp NC_012695.1 3036534 3037550 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3036534..3037550 Burkholderia pseudomallei MSHR346 7889358 YP_002897810.1 CDS GBP346_A3129 NC_012695.1 3037724 3037879 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3037724..3037879 Burkholderia pseudomallei MSHR346 7888102 YP_002897811.1 CDS GBP346_A3131 NC_012695.1 3038034 3038216 R hypothetical protein complement(3038034..3038216) Burkholderia pseudomallei MSHR346 7889203 YP_002897812.1 CDS GBP346_A3132 NC_012695.1 3038430 3038906 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3038430..3038906 Burkholderia pseudomallei MSHR346 7888789 YP_002897813.1 CDS GBP346_A3133 NC_012695.1 3038995 3039141 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3038995..3039141 Burkholderia pseudomallei MSHR346 7890230 YP_002897814.1 CDS GBP346_A3134 NC_012695.1 3039162 3039377 R hypothetical protein complement(3039162..3039377) Burkholderia pseudomallei MSHR346 7887211 YP_002897815.1 CDS GBP346_A3135 NC_012695.1 3040077 3040328 D identified by match to protein family HMM PF04226; transglycosylase-associated protein 3040077..3040328 Burkholderia pseudomallei MSHR346 7889762 YP_002897816.1 CDS GBP346_A3136 NC_012695.1 3040615 3041112 R hypothetical protein complement(3040615..3041112) Burkholderia pseudomallei MSHR346 7889141 YP_002897817.1 CDS GBP346_A3137 NC_012695.1 3041109 3042359 R BNR/Asp-box repeat domain protein complement(3041109..3042359) Burkholderia pseudomallei MSHR346 7888675 YP_002897818.1 CDS GBP346_A3138 NC_012695.1 3042368 3044704 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor complement(3042368..3044704) Burkholderia pseudomallei MSHR346 7889409 YP_002897819.1 CDS GBP346_A3139 NC_012695.1 3044696 3044836 D hypothetical protein 3044696..3044836 Burkholderia pseudomallei MSHR346 7888341 YP_002897820.1 CDS GBP346_A3140 NC_012695.1 3044851 3045240 R hypothetical protein complement(3044851..3045240) Burkholderia pseudomallei MSHR346 7890520 YP_002897821.1 CDS GBP346_A3141 NC_012695.1 3045446 3045592 D hypothetical protein 3045446..3045592 Burkholderia pseudomallei MSHR346 7887236 YP_002897822.1 CDS GBP346_A3143 NC_012695.1 3045877 3046446 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3045877..3046446 Burkholderia pseudomallei MSHR346 7888561 YP_002897823.1 CDS GBP346_A3142 NC_012695.1 3046443 3046601 R hypothetical protein complement(3046443..3046601) Burkholderia pseudomallei MSHR346 7890299 YP_002897824.1 CDS GBP346_A3144 NC_012695.1 3046755 3047900 R identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573; exonuclease, DNA polymerase III, epsilon subunit family/GIY-YIG catalytic domain protein complement(3046755..3047900) Burkholderia pseudomallei MSHR346 7887478 YP_002897825.1 CDS GBP346_A3145 NC_012695.1 3048046 3048249 R identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein complement(3048046..3048249) Burkholderia pseudomallei MSHR346 7887965 YP_002897826.1 CDS GBP346_A3146 NC_012695.1 3048652 3048915 D hypothetical protein 3048652..3048915 Burkholderia pseudomallei MSHR346 7890020 YP_002897827.1 CDS GBP346_A3147 NC_012695.1 3049431 3050570 D identified by match to protein family HMM PF00267; putative outer membrane porin 3049431..3050570 Burkholderia pseudomallei MSHR346 7889648 YP_002897828.1 CDS greB NC_012695.1 3050798 3051361 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(3050798..3051361) Burkholderia pseudomallei MSHR346 7889937 YP_002897829.1 CDS GBP346_A3151 NC_012695.1 3051899 3054268 R identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase) complement(3051899..3054268) Burkholderia pseudomallei MSHR346 7889186 YP_002897830.1 CDS rpoZ NC_012695.1 3054335 3054538 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(3054335..3054538) Burkholderia pseudomallei MSHR346 7889014 YP_002897831.1 CDS gmk NC_012695.1 3054599 3055282 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3054599..3055282) Burkholderia pseudomallei MSHR346 7890552 YP_002897832.1 CDS GBP346_A3154 NC_012695.1 3055289 3056212 R identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein complement(3055289..3056212) Burkholderia pseudomallei MSHR346 7888164 YP_002897833.1 CDS rph NC_012695.1 3056384 3057115 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3056384..3057115 Burkholderia pseudomallei MSHR346 7888399 YP_002897834.1 CDS rdgB NC_012695.1 3057112 3057744 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3057112..3057744 Burkholderia pseudomallei MSHR346 7889620 YP_002897835.1 CDS GBP346_A3157 NC_012695.1 3057741 3058958 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3057741..3058958 Burkholderia pseudomallei MSHR346 7888859 YP_002897836.1 CDS GBP346_A3159 NC_012695.1 3059399 3059623 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3059399..3059623 Burkholderia pseudomallei MSHR346 7889204 YP_002897837.1 CDS GBP346_A3160 NC_012695.1 3059683 3059892 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family 3059683..3059892 Burkholderia pseudomallei MSHR346 7887158 YP_002897838.1 CDS GBP346_A3161 NC_012695.1 3060036 3060152 D hypothetical protein 3060036..3060152 Burkholderia pseudomallei MSHR346 7889764 YP_002897839.1 CDS GBP346_A3162 NC_012695.1 3060166 3060477 R transcriptional regulator, XRE family complement(3060166..3060477) Burkholderia pseudomallei MSHR346 7888995 YP_002897840.1 CDS GBP346_A3163 NC_012695.1 3060918 3061412 D identified by match to protein family HMM TIGR01352; TonB domain protein 3060918..3061412 Burkholderia pseudomallei MSHR346 7888586 YP_002897841.1 CDS GBP346_A3164 NC_012695.1 3061544 3061741 R hypothetical protein complement(3061544..3061741) Burkholderia pseudomallei MSHR346 7887232 YP_002897842.1 CDS GBP346_A3165 NC_012695.1 3061841 3063154 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, metabolite:H+ symporter (MHS) family protein 3061841..3063154 Burkholderia pseudomallei MSHR346 7889283 YP_002897843.1 CDS GBP346_A3166 NC_012695.1 3063335 3063517 D hypothetical protein 3063335..3063517 Burkholderia pseudomallei MSHR346 7890294 YP_002897844.1 CDS rfaC_1 NC_012695.1 3063552 3064574 R identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I complement(3063552..3064574) Burkholderia pseudomallei MSHR346 7888929 YP_002897845.1 CDS GBP346_A3168 NC_012695.1 3064736 3066382 D identified by match to protein family HMM PF00654; chloride transporter, ClC family 3064736..3066382 Burkholderia pseudomallei MSHR346 7887712 YP_002897846.1 CDS GBP346_A3169 NC_012695.1 3066499 3066918 R hypothetical protein complement(3066499..3066918) Burkholderia pseudomallei MSHR346 7887895 YP_002897847.1 CDS minE NC_012695.1 3067040 3067294 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3067040..3067294) Burkholderia pseudomallei MSHR346 7887626 YP_002897848.1 CDS minD NC_012695.1 3067307 3068122 R identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(3067307..3068122) Burkholderia pseudomallei MSHR346 7887469 YP_002897849.1 CDS minC NC_012695.1 3068181 3068993 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3068181..3068993) Burkholderia pseudomallei MSHR346 7890506 YP_002897850.1 CDS GBP346_A3173 NC_012695.1 3069147 3069644 R identified by match to protein family HMM PF00583; acetyltransferase, gnat family complement(3069147..3069644) Burkholderia pseudomallei MSHR346 7890014 YP_002897851.1 CDS GBP346_A3174 NC_012695.1 3069711 3070403 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3069711..3070403 Burkholderia pseudomallei MSHR346 7888994 YP_002897852.1 CDS GBP346_A3175 NC_012695.1 3070636 3070908 D hypothetical protein 3070636..3070908 Burkholderia pseudomallei MSHR346 7888651 YP_002897853.1 CDS serS NC_012695.1 3071338 3072639 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(3071338..3072639) Burkholderia pseudomallei MSHR346 7889183 YP_002897854.1 CDS GBP346_A3178 NC_012695.1 3072752 3073063 D hypothetical protein 3072752..3073063 Burkholderia pseudomallei MSHR346 7888545 YP_002897855.1 CDS GBP346_A3179 NC_012695.1 3073103 3074413 R identified by match to protein family HMM PF00004; match to protein family HMM PF07728; recombination factor protein RarA complement(3073103..3074413) Burkholderia pseudomallei MSHR346 7886729 YP_002897856.1 CDS lolA NC_012695.1 3074611 3075321 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(3074611..3075321) Burkholderia pseudomallei MSHR346 7889653 YP_002897857.1 CDS GBP346_A3181 NC_012695.1 3075379 3077847 R identified by match to protein family HMM PF01580; match to protein family HMM PF09397; DNA translocase FtsK complement(3075379..3077847) Burkholderia pseudomallei MSHR346 7889973 YP_002897858.1 CDS trxB NC_012695.1 3078013 3078975 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 3078013..3078975 Burkholderia pseudomallei MSHR346 7888568 YP_002897859.1 CDS GBP346_A3183 NC_012695.1 3079143 3079880 D identified by match to protein family HMM PF01713; Smr domain protein 3079143..3079880 Burkholderia pseudomallei MSHR346 7886759 YP_002897860.1 CDS GBP346_A3184 NC_012695.1 3079906 3080526 D identified by match to protein family HMM PF03458; YadS protein 3079906..3080526 Burkholderia pseudomallei MSHR346 7887278 YP_002897861.1 CDS GBP346_A3185 NC_012695.1 3080752 3081870 R identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein complement(3080752..3081870) Burkholderia pseudomallei MSHR346 7886721 YP_002897862.1 CDS GBP346_A3186 NC_012695.1 3081971 3082828 R identified by match to protein family HMM PF00528; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein complement(3081971..3082828) Burkholderia pseudomallei MSHR346 7887000 YP_002897863.1 CDS GBP346_A3187 NC_012695.1 3082818 3083756 R identified by match to protein family HMM PF00528; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein complement(3082818..3083756) Burkholderia pseudomallei MSHR346 7888145 YP_002897864.1 CDS GBP346_A3188 NC_012695.1 3083740 3083892 R hypothetical protein complement(3083740..3083892) Burkholderia pseudomallei MSHR346 7887510 YP_002897865.1 CDS GBP346_A3189 NC_012695.1 3083913 3085160 R identified by match to protein family HMM PF01547; ABC transporter, carbohydrate uptake transporter-1 complement(3083913..3085160) Burkholderia pseudomallei MSHR346 7888037 YP_002897866.1 CDS zwf NC_012695.1 3085619 3087088 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3085619..3087088 Burkholderia pseudomallei MSHR346 7889895 YP_002897867.1 CDS pgl NC_012695.1 3087176 3087856 D identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase 3087176..3087856 Burkholderia pseudomallei MSHR346 7889236 YP_002897868.1 CDS GBP346_A3192 NC_012695.1 3087834 3089759 D glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3087834..3089759 Burkholderia pseudomallei MSHR346 7888663 YP_002897869.1 CDS GBP346_A3193 NC_012695.1 3090068 3091030 D identified by match to protein family HMM PF00497; polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein 3090068..3091030 Burkholderia pseudomallei MSHR346 7887495 YP_002897870.1 CDS GBP346_A3194 NC_012695.1 3091116 3091775 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein 3091116..3091775 Burkholderia pseudomallei MSHR346 7887078 YP_002897871.1 CDS gltL_1 NC_012695.1 3091822 3092547 D identified by match to protein family HMM PF00005; glutamate/aspartate ABC transporter, ATP-binding protein 3091822..3092547 Burkholderia pseudomallei MSHR346 7889649 YP_002897872.1 CDS GBP346_A3196 NC_012695.1 3092619 3093638 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 3092619..3093638 Burkholderia pseudomallei MSHR346 7886741 YP_002897873.1 CDS GBP346_A3197 NC_012695.1 3093635 3094102 D hypothetical protein 3093635..3094102 Burkholderia pseudomallei MSHR346 7890893 YP_002897874.1 CDS GBP346_A3198 NC_012695.1 3094212 3095447 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; drug resistance transporter, Bcr/CflA family complement(3094212..3095447) Burkholderia pseudomallei MSHR346 7889977 YP_002897875.1 CDS GBP346_A3199 NC_012695.1 3095657 3096154 D hypothetical protein 3095657..3096154 Burkholderia pseudomallei MSHR346 7889654 YP_002897876.1 CDS GBP346_A3200 NC_012695.1 3096259 3096717 D hypothetical protein 3096259..3096717 Burkholderia pseudomallei MSHR346 7888092 YP_002897877.1 CDS hemL NC_012695.1 3096736 3098436 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3096736..3098436 Burkholderia pseudomallei MSHR346 7890024 YP_002897878.1 CDS ribD_1 NC_012695.1 3098465 3099601 D identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 3098465..3099601 Burkholderia pseudomallei MSHR346 7886794 YP_002897879.1 CDS ribE NC_012695.1 3099616 3100230 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3099616..3100230 Burkholderia pseudomallei MSHR346 7889092 YP_002897880.1 CDS GBP346_A3204 NC_012695.1 3100336 3100464 R hypothetical protein complement(3100336..3100464) Burkholderia pseudomallei MSHR346 7889247 YP_002897881.1 CDS GBP346_A3205 NC_012695.1 3100454 3100660 D hypothetical protein 3100454..3100660 Burkholderia pseudomallei MSHR346 7889447 YP_002897882.1 CDS ribBA NC_012695.1 3100693 3101829 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3100693..3101829 Burkholderia pseudomallei MSHR346 7888253 YP_002897883.1 CDS ribH NC_012695.1 3101909 3102430 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3101909..3102430 Burkholderia pseudomallei MSHR346 7890256 YP_002897884.1 CDS nusB NC_012695.1 3102427 3102864 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3102427..3102864 Burkholderia pseudomallei MSHR346 7887775 YP_002897885.1 CDS GBP346_A3209 NC_012695.1 3102929 3104122 D identified by match to protein family HMM PF00155; aminotransferase 3102929..3104122 Burkholderia pseudomallei MSHR346 7890913 YP_002897886.1 CDS GBP346_A3210 NC_012695.1 3104371 3104538 D hypothetical protein 3104371..3104538 Burkholderia pseudomallei MSHR346 7890139 YP_002897887.1 CDS GBP346_A3211 NC_012695.1 3104707 3105819 R identified by match to protein family HMM PF01464; transglycosylase, SLT family complement(3104707..3105819) Burkholderia pseudomallei MSHR346 7890623 YP_002897888.1 CDS GBP346_A3212 NC_012695.1 3106399 3107958 D identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3106399..3107958 Burkholderia pseudomallei MSHR346 7890131 YP_002897889.1 CDS GBP346_A3213 NC_012695.1 3108020 3108673 D identified by match to protein family HMM PF01810; translocator protein, LysE family 3108020..3108673 Burkholderia pseudomallei MSHR346 7890041 YP_002897890.1 CDS GBP346_A3214 NC_012695.1 3109155 3110138 R catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase complement(3109155..3110138) Burkholderia pseudomallei MSHR346 7886805 YP_002897891.1 CDS GBP346_A3216 NC_012695.1 3110127 3110306 D hypothetical protein 3110127..3110306 Burkholderia pseudomallei MSHR346 7888099 YP_002897892.1 CDS GBP346_A3215 NC_012695.1 3110300 3110593 R hypothetical protein complement(3110300..3110593) Burkholderia pseudomallei MSHR346 7890360 YP_002897893.1 CDS GBP346_A3217 NC_012695.1 3110590 3110934 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3110590..3110934) Burkholderia pseudomallei MSHR346 7889681 YP_002897894.1 CDS GBP346_A3218 NC_012695.1 3111019 3112155 D identified by match to protein family HMM PF03807; NADP oxidoreductase, coenzyme f420-dependent 3111019..3112155 Burkholderia pseudomallei MSHR346 7888344 YP_002897895.1 CDS GBP346_A3219 NC_012695.1 3112160 3112801 D identified by match to protein family HMM PF02325; membrane protein, yggt family 3112160..3112801 Burkholderia pseudomallei MSHR346 7889061 YP_002897896.1 CDS GBP346_A3220 NC_012695.1 3112825 3113181 R identified by match to protein family HMM PF02641; hypothetical protein complement(3112825..3113181) Burkholderia pseudomallei MSHR346 7889800 YP_002897897.1 CDS crcB NC_012695.1 3113205 3113591 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(3113205..3113591) Burkholderia pseudomallei MSHR346 7888912 YP_002897898.1 CDS GBP346_A3223 NC_012695.1 3113607 3113855 D hypothetical protein 3113607..3113855 Burkholderia pseudomallei MSHR346 7887059 YP_002897899.1 CDS GBP346_A3222 NC_012695.1 3113845 3114033 R identified by glimmer; putative; hypothetical protein complement(3113845..3114033) Burkholderia pseudomallei MSHR346 7886739 YP_002897900.1 CDS GBP346_A3224 NC_012695.1 3114200 3115420 D serine protease, subtilase family 3114200..3115420 Burkholderia pseudomallei MSHR346 7887896 YP_002897901.1 CDS GBP346_A3225 NC_012695.1 3115688 3116416 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyl transferase complement(3115688..3116416) Burkholderia pseudomallei MSHR346 7888449 YP_002897902.1 CDS GBP346_A3226 NC_012695.1 3116542 3116676 R hypothetical protein complement(3116542..3116676) Burkholderia pseudomallei MSHR346 7889076 YP_002897903.1 CDS GBP346_A3227 NC_012695.1 3116654 3116767 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; NAD-dependent deacetylase complement(3116654..3116767) Burkholderia pseudomallei MSHR346 7887263 YP_002897904.1 CDS GBP346_A3228 NC_012695.1 3116772 3117536 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02146; NAD-dependent deacetylase complement(3116772..3117536) Burkholderia pseudomallei MSHR346 7886827 YP_002897905.1 CDS GBP346_A3229 NC_012695.1 3118241 3120292 R identified by glimmer; putative; hypothetical protein complement(3118241..3120292) Burkholderia pseudomallei MSHR346 7890065 YP_002897906.1 CDS GBP346_A3230 NC_012695.1 3120386 3120682 R hypothetical protein complement(3120386..3120682) Burkholderia pseudomallei MSHR346 7887502 YP_002897907.1 CDS GBP346_A3231 NC_012695.1 3121599 3122648 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; DNA repair ATPase 3121599..3122648 Burkholderia pseudomallei MSHR346 7890702 YP_002897908.1 CDS GBP346_A3232 NC_012695.1 3123334 3123495 D identified by glimmer; putative; hypothetical protein 3123334..3123495 Burkholderia pseudomallei MSHR346 7890001 YP_002897909.1 CDS GBP346_A3233 NC_012695.1 3123608 3124855 R identified by match to protein family HMM PF01381; match to protein family HMM PF06114; putative phage-related DNA-binding protein complement(3123608..3124855) Burkholderia pseudomallei MSHR346 7887290 YP_002897910.1 CDS GBP346_A3234 NC_012695.1 3124794 3125141 R hypothetical protein complement(3124794..3125141) Burkholderia pseudomallei MSHR346 7889387 YP_002897911.1 CDS trmB NC_012695.1 3125920 3126717 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3125920..3126717 Burkholderia pseudomallei MSHR346 7889214 YP_002897912.1 CDS uppP NC_012695.1 3126869 3127699 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3126869..3127699) Burkholderia pseudomallei MSHR346 7889826 YP_002897913.1 CDS GBP346_A3238 NC_012695.1 3127776 3128357 R hypothetical protein complement(3127776..3128357) Burkholderia pseudomallei MSHR346 7886911 YP_002897914.1 CDS GBP346_A3239 NC_012695.1 3128354 3128683 R identified by match to protein family HMM PF03692; proteinase inhibitor complement(3128354..3128683) Burkholderia pseudomallei MSHR346 7887645 YP_002897915.1 CDS GBP346_A3240 NC_012695.1 3128709 3128828 R hypothetical protein complement(3128709..3128828) Burkholderia pseudomallei MSHR346 7887534 YP_002897916.1 CDS hemN_2 NC_012695.1 3128853 3130247 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3128853..3130247 Burkholderia pseudomallei MSHR346 7890100 YP_002897917.1 CDS GBP346_A3242 NC_012695.1 3130329 3130586 D hypothetical protein 3130329..3130586 Burkholderia pseudomallei MSHR346 7890022 YP_002897918.1 CDS GBP346_A3243 NC_012695.1 3130694 3131347 D identified by match to protein family HMM PF01135; match to protein family HMM PF05175; match to protein family HMM PF08241; protein-L-isoaspartate 3130694..3131347 Burkholderia pseudomallei MSHR346 7888189 YP_002897919.1 CDS GBP346_A3244 NC_012695.1 3131356 3131685 D identified by match to protein family HMM PF00581; rhodanese domain protein 3131356..3131685 Burkholderia pseudomallei MSHR346 7886936 YP_002897920.1 CDS GBP346_A3245 NC_012695.1 3131778 3133106 R catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase complement(3131778..3133106) Burkholderia pseudomallei MSHR346 7887428 YP_002897921.1 CDS GBP346_A3246 NC_012695.1 3133103 3133363 R hypothetical protein complement(3133103..3133363) Burkholderia pseudomallei MSHR346 7888668 YP_002897922.1 CDS GBP346_A3247 NC_012695.1 3133412 3134767 D identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR03407; urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein 3133412..3134767 Burkholderia pseudomallei MSHR346 7890546 YP_002897923.1 CDS GBP346_A3248 NC_012695.1 3134862 3136484 D identified by match to protein family HMM PF02653; match to protein family HMM TIGR03409; branched-chain amino acid ABC transporter, permease protein 3134862..3136484 Burkholderia pseudomallei MSHR346 7888988 YP_002897924.1 CDS urtC NC_012695.1 3136486 3137688 D identified by match to protein family HMM PF02653; match to protein family HMM TIGR01409; match to protein family HMM TIGR03408; urea ABC transporter, permease protein UrtC 3136486..3137688 Burkholderia pseudomallei MSHR346 7886981 YP_002897925.1 CDS urtD NC_012695.1 3137685 3138548 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR03411; urea ABC transporter, ATP-binding protein UrtD 3137685..3138548 Burkholderia pseudomallei MSHR346 7890643 YP_002897926.1 CDS urtE NC_012695.1 3138553 3139245 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR03410; urea ABC transporter, ATP-binding protein UrtE 3138553..3139245 Burkholderia pseudomallei MSHR346 7888015 YP_002897927.1 CDS ureD NC_012695.1 3139520 3140395 D identified by match to protein family HMM PF01774; urease accessory protein UreD 3139520..3140395 Burkholderia pseudomallei MSHR346 7889144 YP_002897928.1 CDS GBP346_A3253 NC_012695.1 3140444 3140557 D identified by glimmer; putative; hypothetical protein 3140444..3140557 Burkholderia pseudomallei MSHR346 7888637 YP_002897929.1 CDS ureA NC_012695.1 3140617 3140919 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3140617..3140919 Burkholderia pseudomallei MSHR346 7886876 YP_002897930.1 CDS ureB NC_012695.1 3141009 3141314 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3141009..3141314 Burkholderia pseudomallei MSHR346 7887862 YP_002897931.1 CDS ureC NC_012695.1 3141379 3143085 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3141379..3143085 Burkholderia pseudomallei MSHR346 7888133 YP_002897932.1 CDS ureE NC_012695.1 3143103 3143738 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3143103..3143738 Burkholderia pseudomallei MSHR346 7886764 YP_002897933.1 CDS ureF NC_012695.1 3143695 3144405 D identified by match to protein family HMM PF01730; urease accessory protein UreF 3143695..3144405 Burkholderia pseudomallei MSHR346 7888566 YP_002897934.1 CDS ureG NC_012695.1 3144436 3145086 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101; urease accessory protein UreG 3144436..3145086 Burkholderia pseudomallei MSHR346 7889975 YP_002897935.1 CDS GBP346_A3260 NC_012695.1 3145311 3146696 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(3145311..3146696) Burkholderia pseudomallei MSHR346 7888612 YP_002897936.1 CDS GBP346_A3261 NC_012695.1 3146734 3147618 R hypothetical protein complement(3146734..3147618) Burkholderia pseudomallei MSHR346 7890089 YP_002897937.1 CDS rfaC_2 NC_012695.1 3147634 3148629 R identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I complement(3147634..3148629) Burkholderia pseudomallei MSHR346 7889434 YP_002897938.1 CDS GBP346_A3263 NC_012695.1 3148810 3150375 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase/phosphoglucomutase (PMM /PGM) complement(3148810..3150375) Burkholderia pseudomallei MSHR346 7890703 YP_002897939.1 CDS GBP346_A3264 NC_012695.1 3150388 3151722 D identified by match to protein family HMM PF01943; hypothetical protein 3150388..3151722 Burkholderia pseudomallei MSHR346 7887072 YP_002897940.1 CDS GBP346_A3265 NC_012695.1 3151719 3152555 D identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family 3151719..3152555 Burkholderia pseudomallei MSHR346 7890915 YP_002897941.1 CDS GBP346_A3266 NC_012695.1 3152584 3153741 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 3152584..3153741 Burkholderia pseudomallei MSHR346 7889605 YP_002897942.1 CDS galE NC_012695.1 3153756 3154778 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 3153756..3154778 Burkholderia pseudomallei MSHR346 7890894 YP_002897943.1 CDS GBP346_A3268 NC_012695.1 3154806 3155912 D identified by match to protein family HMM PF00953; glycosyl transferase family protein 3154806..3155912 Burkholderia pseudomallei MSHR346 7889587 YP_002897944.1 CDS GBP346_A3269 NC_012695.1 3155975 3156112 R hypothetical protein complement(3155975..3156112) Burkholderia pseudomallei MSHR346 7886905 YP_002897945.1 CDS GBP346_A3270 NC_012695.1 3156285 3158198 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02629; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; putative epimerase/dehydratase WbiI complement(3156285..3158198) Burkholderia pseudomallei MSHR346 7888740 YP_002897946.1 CDS wbiH NC_012695.1 3158205 3159215 R identified by match to protein family HMM PF00953; glycosyl transferase family protein complement(3158205..3159215) Burkholderia pseudomallei MSHR346 7887397 YP_002897947.1 CDS GBP346_A3272 NC_012695.1 3159233 3160198 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; putative epimerase/dehydratase WbiG complement(3159233..3160198) Burkholderia pseudomallei MSHR346 7889458 YP_002897948.1 CDS GBP346_A3273 NC_012695.1 3160195 3160995 R identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family complement(3160195..3160995) Burkholderia pseudomallei MSHR346 7888802 YP_002897949.1 CDS GBP346_A3274 NC_012695.1 3161100 3162941 R identified by match to protein family HMM PF00535; putative glycosyl transferase WbiE complement(3161100..3162941) Burkholderia pseudomallei MSHR346 7889801 YP_002897950.1 CDS GBP346_A3275 NC_012695.1 3162993 3164717 R identified by match to protein family HMM PF00535; match to protein family HMM PF08242; putative glycosyl transferase WbiD complement(3162993..3164717) Burkholderia pseudomallei MSHR346 7888610 YP_002897951.1 CDS GBP346_A3276 NC_012695.1 3164721 3165605 R glycosyltransferase complement(3164721..3165605) Burkholderia pseudomallei MSHR346 7890593 YP_002897952.1 CDS GBP346_A3277 NC_012695.1 3165665 3166756 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein complement(3165665..3166756) Burkholderia pseudomallei MSHR346 7887797 YP_002897953.1 CDS GBP346_A3278 NC_012695.1 3166756 3167994 R identified by match to protein family HMM PF01757; acetyltransferase complement(3166756..3167994) Burkholderia pseudomallei MSHR346 7889481 YP_002897954.1 CDS GBP346_A3279 NC_012695.1 3167991 3169388 R identified by match to protein family HMM PF00005; polysaccharide ABC transporter, ATP-binding protein complement(3167991..3169388) Burkholderia pseudomallei MSHR346 7888257 YP_002897955.1 CDS GBP346_A3280 NC_012695.1 3169390 3170223 R identified by match to protein family HMM PF01061; ABC-2 type transport system integral membrane protein complement(3169390..3170223) Burkholderia pseudomallei MSHR346 7889775 YP_002897956.1 CDS rfbD NC_012695.1 3170250 3171146 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase complement(3170250..3171146) Burkholderia pseudomallei MSHR346 7886867 YP_002897957.1 CDS rfbC NC_012695.1 3171143 3171694 R identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase complement(3171143..3171694) Burkholderia pseudomallei MSHR346 7889284 YP_002897958.1 CDS rfbA NC_012695.1 3171679 3172572 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase complement(3171679..3172572) Burkholderia pseudomallei MSHR346 7887045 YP_002897959.1 CDS rfbB NC_012695.1 3172584 3173645 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase complement(3172584..3173645) Burkholderia pseudomallei MSHR346 7888725 YP_002897960.1 CDS GBP346_A3285 NC_012695.1 3173886 3174029 R identified by glimmer; putative; hypothetical protein complement(3173886..3174029) Burkholderia pseudomallei MSHR346 7887820 YP_002897961.1 CDS apaH NC_012695.1 3174023 3174871 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 3174023..3174871 Burkholderia pseudomallei MSHR346 7887525 YP_002897962.1 CDS GBP346_A3287 NC_012695.1 3175001 3175870 R identified by match to protein family HMM PF01553; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC complement(3175001..3175870) Burkholderia pseudomallei MSHR346 7887448 YP_002897963.1 CDS GBP346_A3288 NC_012695.1 3175885 3177162 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(3175885..3177162) Burkholderia pseudomallei MSHR346 7890418 YP_002897964.1 CDS pyrB NC_012695.1 3177254 3178339 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(3177254..3178339) Burkholderia pseudomallei MSHR346 7887725 YP_002897965.1 CDS GBP346_A3290 NC_012695.1 3178366 3178884 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(3178366..3178884) Burkholderia pseudomallei MSHR346 7888756 YP_002897966.1 CDS GBP346_A3291 NC_012695.1 3178871 3179311 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(3178871..3179311) Burkholderia pseudomallei MSHR346 7887116 YP_002897967.1 CDS GBP346_A3292 NC_012695.1 3179308 3179886 R identified by match to protein family HMM PF02622; hypothetical protein complement(3179308..3179886) Burkholderia pseudomallei MSHR346 7889379 YP_002897968.1 CDS GBP346_A3293 NC_012695.1 3180092 3181342 R hypothetical protein complement(3180092..3181342) Burkholderia pseudomallei MSHR346 7886728 YP_002897969.1 CDS GBP346_A3294 NC_012695.1 3181519 3181689 R identified by match to protein family HMM PF00301; rubredoxin complement(3181519..3181689) Burkholderia pseudomallei MSHR346 7889279 YP_002897970.1 CDS GBP346_A3295 NC_012695.1 3181909 3182757 D identified by match to protein family HMM PF08543; phosphomethylpyrimidine kinase type-1 3181909..3182757 Burkholderia pseudomallei MSHR346 7889588 YP_002897971.1 CDS groEL NC_012695.1 3183084 3184724 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3183084..3184724) Burkholderia pseudomallei MSHR346 7889223 YP_002897972.1 CDS groES NC_012695.1 3184772 3185065 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3184772..3185065) Burkholderia pseudomallei MSHR346 7887252 YP_002897973.1 CDS GBP346_A3298 NC_012695.1 3185305 3185421 R hypothetical protein complement(3185305..3185421) Burkholderia pseudomallei MSHR346 7886692 YP_002897974.1 CDS GBP346_A3299 NC_012695.1 3185655 3187814 R hypothetical protein complement(3185655..3187814) Burkholderia pseudomallei MSHR346 7888699 YP_002897975.1 CDS GBP346_A3301 NC_012695.1 3187831 3188064 D hypothetical protein 3187831..3188064 Burkholderia pseudomallei MSHR346 7889479 YP_002897976.1 CDS GBP346_A3300 NC_012695.1 3188038 3188202 R hypothetical protein complement(3188038..3188202) Burkholderia pseudomallei MSHR346 7889874 YP_002897977.1 CDS GBP346_A3302 NC_012695.1 3188405 3188521 R identified by glimmer; putative; hypothetical protein complement(3188405..3188521) Burkholderia pseudomallei MSHR346 7888650 YP_002897978.1 CDS GBP346_A3303 NC_012695.1 3188577 3188780 D identified by glimmer; putative; hypothetical protein 3188577..3188780 Burkholderia pseudomallei MSHR346 7887701 YP_002897979.1 CDS GBP346_A3304 NC_012695.1 3188872 3189567 R identified by match to protein family HMM PF01638; transcriptional regulator family protein complement(3188872..3189567) Burkholderia pseudomallei MSHR346 7889904 YP_002897980.1 CDS GBP346_A3305 NC_012695.1 3189554 3190561 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family 3189554..3190561 Burkholderia pseudomallei MSHR346 7887086 YP_002897981.1 CDS GBP346_A3306 NC_012695.1 3190585 3191607 R hypothetical protein complement(3190585..3191607) Burkholderia pseudomallei MSHR346 7889323 YP_002897982.1 CDS GBP346_A3307 NC_012695.1 3191628 3191894 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3191628..3191894 Burkholderia pseudomallei MSHR346 7887728 YP_002897983.1 CDS GBP346_A3309 NC_012695.1 3191891 3192103 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3191891..3192103 Burkholderia pseudomallei MSHR346 7890944 YP_002897984.1 CDS GBP346_A3308 NC_012695.1 3192097 3192612 R hypothetical protein complement(3192097..3192612) Burkholderia pseudomallei MSHR346 7886767 YP_002897985.1 CDS GBP346_A3310 NC_012695.1 3192728 3193600 R identified by match to protein family HMM PF03922; outer membrane protein, OmpW family complement(3192728..3193600) Burkholderia pseudomallei MSHR346 7887646 YP_002897986.1 CDS GBP346_A3311 NC_012695.1 3193630 3194883 R putative lipoprotein complement(3193630..3194883) Burkholderia pseudomallei MSHR346 7888047 YP_002897987.1 CDS GBP346_A3312 NC_012695.1 3194943 3196541 R hypothetical protein complement(3194943..3196541) Burkholderia pseudomallei MSHR346 7887002 YP_002897988.1 CDS GBP346_A3313 NC_012695.1 3197076 3197204 R hypothetical protein complement(3197076..3197204) Burkholderia pseudomallei MSHR346 7886821 YP_002897989.1 CDS GBP346_A3314 NC_012695.1 3197278 3197724 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01638; match to protein family HMM PF03551; transcriptional regulator, PadR family complement(3197278..3197724) Burkholderia pseudomallei MSHR346 7886755 YP_002897990.1 CDS GBP346_A3315 NC_012695.1 3198022 3199236 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3198022..3199236 Burkholderia pseudomallei MSHR346 7887635 YP_002897991.1 CDS GBP346_A3316 NC_012695.1 3199417 3200004 D identified by match to protein family HMM PF01381; DNA-binding protein 3199417..3200004 Burkholderia pseudomallei MSHR346 7887686 YP_002897992.1 CDS GBP346_A3317 NC_012695.1 3200001 3200528 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 3200001..3200528 Burkholderia pseudomallei MSHR346 7890142 YP_002897993.1 CDS GBP346_A3318 NC_012695.1 3200878 3201501 D identified by match to protein family HMM PF01810; translocator protein, LysE family 3200878..3201501 Burkholderia pseudomallei MSHR346 7890117 YP_002897994.1 CDS GBP346_A3319 NC_012695.1 3201965 3203101 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein 3201965..3203101 Burkholderia pseudomallei MSHR346 7886976 YP_002897995.1 CDS GBP346_A3320 NC_012695.1 3203231 3204673 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter 3203231..3204673 Burkholderia pseudomallei MSHR346 7887169 YP_002897996.1 CDS GBP346_A3321 NC_012695.1 3204811 3205149 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3204811..3205149 Burkholderia pseudomallei MSHR346 7888025 YP_002897997.1 CDS GBP346_A3322 NC_012695.1 3205162 3205956 D identified by match to protein family HMM PF01925; hypothetical protein 3205162..3205956 Burkholderia pseudomallei MSHR346 7886704 YP_002897998.1 CDS GBP346_A3323 NC_012695.1 3206289 3208136 R identified by match to protein family HMM PF00450; serine-type carboxypeptidase family protein complement(3206289..3208136) Burkholderia pseudomallei MSHR346 7887257 YP_002897999.1 CDS GBP346_A3324 NC_012695.1 3208136 3208273 R hypothetical protein complement(3208136..3208273) Burkholderia pseudomallei MSHR346 7889769 YP_002898000.1 CDS GBP346_A3325 NC_012695.1 3208475 3208591 D hypothetical protein 3208475..3208591 Burkholderia pseudomallei MSHR346 7888172 YP_002898001.1 CDS GBP346_A3326 NC_012695.1 3208742 3210964 R hypothetical protein complement(3208742..3210964) Burkholderia pseudomallei MSHR346 7888111 YP_002898002.1 CDS GBP346_A3327 NC_012695.1 3210961 3211329 R identified by match to protein family HMM PF04972; putative phospholipid-binding protein complement(3210961..3211329) Burkholderia pseudomallei MSHR346 7888958 YP_002898003.1 CDS GBP346_A3328 NC_012695.1 3211586 3211705 R hypothetical protein complement(3211586..3211705) Burkholderia pseudomallei MSHR346 7888195 YP_002898004.1 CDS GBP346_A3329 NC_012695.1 3211712 3213211 D hypothetical protein 3211712..3213211 Burkholderia pseudomallei MSHR346 7890562 YP_002898005.1 CDS GBP346_A3330 NC_012695.1 3213309 3213947 D identified by match to protein family HMM PF01323; dsba oxidoreductase 3213309..3213947 Burkholderia pseudomallei MSHR346 7890106 YP_002898006.1 CDS GBP346_A3331 NC_012695.1 3214021 3214968 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3214021..3214968 Burkholderia pseudomallei MSHR346 7887681 YP_002898007.1 CDS GBP346_A3332 NC_012695.1 3215051 3216166 R identified by match to protein family HMM PF01032; iron chelate uptake ABC transporter, FeCT family, permease protein complement(3215051..3216166) Burkholderia pseudomallei MSHR346 7889689 YP_002898008.1 CDS GBP346_A3333 NC_012695.1 3216163 3217191 R identified by match to protein family HMM PF01497; putative iron chelate uptake ABC transporter, periplasmic solute-binding protein complement(3216163..3217191) Burkholderia pseudomallei MSHR346 7888273 YP_002898009.1 CDS GBP346_A3334 NC_012695.1 3217185 3217976 R identified by match to protein family HMM PF00005; iron chelate uptake ABC transporter, FeCT family, ATP-binding protein complement(3217185..3217976) Burkholderia pseudomallei MSHR346 7889812 YP_002898010.1 CDS GBP346_A3335 NC_012695.1 3218018 3220306 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783; TonB-dependent siderophore receptor complement(3218018..3220306) Burkholderia pseudomallei MSHR346 7886889 YP_002898011.1 CDS GBP346_A3336 NC_012695.1 3220289 3220441 D hypothetical protein 3220289..3220441 Burkholderia pseudomallei MSHR346 7890680 YP_002898012.1 CDS GBP346_A3337 NC_012695.1 3220797 3221201 R hypothetical protein complement(3220797..3221201) Burkholderia pseudomallei MSHR346 7887358 YP_002898013.1 CDS GBP346_A3338 NC_012695.1 3221386 3222168 R identified by match to protein family HMM PF01547; ABC-type molybdate transport system, periplasmic component complement(3221386..3222168) Burkholderia pseudomallei MSHR346 7890705 YP_002898014.1 CDS xdhB NC_012695.1 3222553 3224916 R identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02965; xanthine dehydrogenase, molybdopterin binding subunit complement(3222553..3224916) Burkholderia pseudomallei MSHR346 7887386 YP_002898015.1 CDS xdhA NC_012695.1 3224945 3226462 R identified by match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450; match to protein family HMM TIGR02963; xanthine dehydrogenase, small subunit complement(3224945..3226462) Burkholderia pseudomallei MSHR346 7890236 YP_002898016.1 CDS GBP346_A3341 NC_012695.1 3226543 3226659 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3226543..3226659 Burkholderia pseudomallei MSHR346 7889521 YP_002898017.1 CDS GBP346_A3342 NC_012695.1 3226741 3227964 D identified by match to protein family HMM PF07690; major facilitator superfamily transporter 3226741..3227964 Burkholderia pseudomallei MSHR346 7890260 YP_002898018.1 CDS GBP346_A3343 NC_012695.1 3228441 3229331 R identified by match to protein family HMM PF00892; hypothetical protein complement(3228441..3229331) Burkholderia pseudomallei MSHR346 7887984 YP_002898019.1 CDS GBP346_A3344 NC_012695.1 3229473 3230420 D identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 3229473..3230420 Burkholderia pseudomallei MSHR346 7887814 YP_002898020.1 CDS GBP346_A3345 NC_012695.1 3230445 3231659 R identified by match to protein family HMM PF00266; aminotransferase, class V complement(3230445..3231659) Burkholderia pseudomallei MSHR346 7887602 YP_002898021.1 CDS GBP346_A3346 NC_012695.1 3231681 3231995 D hypothetical protein 3231681..3231995 Burkholderia pseudomallei MSHR346 7887385 YP_002898022.1 CDS GBP346_A3347 NC_012695.1 3232557 3233537 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3232557..3233537 Burkholderia pseudomallei MSHR346 7887540 YP_002898023.1 CDS GBP346_A3348 NC_012695.1 3233584 3234588 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 3233584..3234588 Burkholderia pseudomallei MSHR346 7888020 YP_002898024.1 CDS bluB NC_012695.1 3235130 3235789 D identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476; cob(II)yrinic acid a,c-diamide reductase 3235130..3235789 Burkholderia pseudomallei MSHR346 7890910 YP_002898025.1 CDS GBP346_A3350 NC_012695.1 3235905 3237074 D identified by match to protein family HMM PF07690; inner membrane transport protein YdhP 3235905..3237074 Burkholderia pseudomallei MSHR346 7887600 YP_002898026.1 CDS GBP346_A3351 NC_012695.1 3237359 3238528 D identified by match to protein family HMM PF07690; major facilitator family transporter 3237359..3238528 Burkholderia pseudomallei MSHR346 7890111 YP_002898027.1 CDS fahA NC_012695.1 3238966 3240273 R identified by match to protein family HMM PF01557; match to protein family HMM PF09298; match to protein family HMM TIGR01266; fumarylacetoacetase complement(3238966..3240273) Burkholderia pseudomallei MSHR346 7886724 YP_002898028.1 CDS hmgA NC_012695.1 3240270 3241604 R An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase complement(3240270..3241604) Burkholderia pseudomallei MSHR346 7888897 YP_002898029.1 CDS pcaK_1 NC_012695.1 3241623 3242978 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; 4-hydroxybenzoate transporter complement(3241623..3242978) Burkholderia pseudomallei MSHR346 7887777 YP_002898030.1 CDS GBP346_A3355 NC_012695.1 3242975 3243205 R hypothetical protein complement(3242975..3243205) Burkholderia pseudomallei MSHR346 7890846 YP_002898031.1 CDS GBP346_A3356 NC_012695.1 3243248 3244909 R identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD-dependent oxidoreductase complement(3243248..3244909) Burkholderia pseudomallei MSHR346 7890195 YP_002898032.1 CDS GBP346_A3357 NC_012695.1 3244929 3245885 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(3244929..3245885) Burkholderia pseudomallei MSHR346 7887205 YP_002898033.1 CDS GBP346_A3358 NC_012695.1 3245968 3246099 R hypothetical protein complement(3245968..3246099) Burkholderia pseudomallei MSHR346 7890167 YP_002898034.1 CDS GBP346_A3359 NC_012695.1 3246142 3246948 D identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase 3246142..3246948 Burkholderia pseudomallei MSHR346 7889474 YP_002898035.1 CDS GBP346_A3360 NC_012695.1 3247035 3247391 D hypothetical protein 3247035..3247391 Burkholderia pseudomallei MSHR346 7888680 YP_002898036.1 CDS GBP346_A3361 NC_012695.1 3247408 3247815 R identified by match to protein family HMM PF04828; glutathione-dependent formaldehyde-activating, GFA complement(3247408..3247815) Burkholderia pseudomallei MSHR346 7889832 YP_002898037.1 CDS GBP346_A3362 NC_012695.1 3248164 3248967 R identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family complement(3248164..3248967) Burkholderia pseudomallei MSHR346 7890745 YP_002898038.1 CDS GBP346_A3363 NC_012695.1 3249032 3250219 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase, (GCD) 3249032..3250219 Burkholderia pseudomallei MSHR346 7890742 YP_002898039.1 CDS GBP346_A3364 NC_012695.1 3250474 3251112 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; peroxiredoxin PRX1 complement(3250474..3251112) Burkholderia pseudomallei MSHR346 7890683 YP_002898040.1 CDS GBP346_A3365 NC_012695.1 3251323 3251742 D identified by match to protein family HMM PF05957; hypothetical protein 3251323..3251742 Burkholderia pseudomallei MSHR346 7890638 YP_002898041.1 CDS GBP346_A3366 NC_012695.1 3251866 3252255 D hypothetical protein 3251866..3252255 Burkholderia pseudomallei MSHR346 7888818 YP_002898042.1 CDS GBP346_A3367 NC_012695.1 3252359 3252763 D hypothetical protein 3252359..3252763 Burkholderia pseudomallei MSHR346 7888809 YP_002898043.1 CDS GBP346_A3368 NC_012695.1 3252868 3253269 R putative type IV pilus biogenesis protein complement(3252868..3253269) Burkholderia pseudomallei MSHR346 7887066 YP_002898044.1 CDS GBP346_A3369 NC_012695.1 3253340 3253897 R hypothetical protein complement(3253340..3253897) Burkholderia pseudomallei MSHR346 7890347 YP_002898045.1 CDS GBP346_A3370 NC_012695.1 3253936 3254721 R identified by match to protein family HMM TIGR02532; prepilin-type N- cleavage/methylation domain protein complement(3253936..3254721) Burkholderia pseudomallei MSHR346 7889730 YP_002898046.1 CDS GBP346_A3371 NC_012695.1 3254718 3255095 R hypothetical protein complement(3254718..3255095) Burkholderia pseudomallei MSHR346 7890211 YP_002898047.1 CDS GBP346_A3372 NC_012695.1 3255125 3255685 R identified by match to protein family HMM TIGR02532; putative type IV pilus protein complement(3255125..3255685) Burkholderia pseudomallei MSHR346 7889384 YP_002898048.1 CDS nrdR NC_012695.1 3255871 3256350 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR complement(3255871..3256350) Burkholderia pseudomallei MSHR346 7890534 YP_002898049.1 CDS glyA NC_012695.1 3256357 3257604 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3256357..3257604) Burkholderia pseudomallei MSHR346 7890827 YP_002898050.1 CDS GBP346_A3375 NC_012695.1 3257587 3257880 D hypothetical protein 3257587..3257880 Burkholderia pseudomallei MSHR346 7888831 YP_002898051.1 CDS GBP346_A3376 NC_012695.1 3258054 3258800 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 3258054..3258800 Burkholderia pseudomallei MSHR346 7887038 YP_002898052.1 CDS ybgC NC_012695.1 3258897 3259391 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; match to protein family HMM TIGR02799; tol-pal system-associated acyl-CoA thioesterase 3258897..3259391 Burkholderia pseudomallei MSHR346 7890906 YP_002898053.1 CDS tolQ NC_012695.1 3259568 3260245 D identified by match to protein family HMM PF01618; match to protein family HMM TIGR02796; protein TolQ 3259568..3260245 Burkholderia pseudomallei MSHR346 7887150 YP_002898054.1 CDS tolR NC_012695.1 3260256 3260705 D identified by match to protein family HMM PF02472; match to protein family HMM TIGR02801; protein TolR 3260256..3260705 Burkholderia pseudomallei MSHR346 7888462 YP_002898055.1 CDS tolA NC_012695.1 3260702 3261727 D identified by match to protein family HMM PF06519; match to protein family HMM TIGR02794; protein TolA 3260702..3261727 Burkholderia pseudomallei MSHR346 7887362 YP_002898056.1 CDS tolB NC_012695.1 3261833 3263125 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3261833..3263125 Burkholderia pseudomallei MSHR346 7889508 YP_002898057.1 CDS GBP346_A3382 NC_012695.1 3263143 3263655 D identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; outer membrane lipoprotein 3263143..3263655 Burkholderia pseudomallei MSHR346 7888820 YP_002898058.1 CDS GBP346_A3383 NC_012695.1 3263675 3264424 D identified by match to protein family HMM TIGR02795; tol-pal system protein YbgF 3263675..3264424 Burkholderia pseudomallei MSHR346 7887382 YP_002898059.1 CDS GBP346_A3385 NC_012695.1 3264938 3265060 R putative lipoprotein complement(3264938..3265060) Burkholderia pseudomallei MSHR346 7889195 YP_002898060.1 CDS GBP346_A3386 NC_012695.1 3265190 3265423 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein complement(3265190..3265423) Burkholderia pseudomallei MSHR346 7889896 YP_002898061.1 CDS GBP346_A3387 NC_012695.1 3265685 3266014 R hypothetical protein complement(3265685..3266014) Burkholderia pseudomallei MSHR346 7889267 YP_002898062.1 CDS galU_2 NC_012695.1 3266048 3267022 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 3266048..3267022 Burkholderia pseudomallei MSHR346 7890155 YP_002898063.1 CDS GBP346_A3389 NC_012695.1 3267054 3267206 D hypothetical protein 3267054..3267206 Burkholderia pseudomallei MSHR346 7890073 YP_002898064.1 CDS GBP346_A3390 NC_012695.1 3267277 3268212 R identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; sugar isomerase, KpsF/GutQ family complement(3267277..3268212) Burkholderia pseudomallei MSHR346 7889886 YP_002898065.1 CDS GBP346_A3391 NC_012695.1 3268315 3268866 R identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family complement(3268315..3268866) Burkholderia pseudomallei MSHR346 7886973 YP_002898066.1 CDS kdsA_2 NC_012695.1 3268863 3269708 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(3268863..3269708) Burkholderia pseudomallei MSHR346 7887548 YP_002898067.1 CDS GBP346_A3393 NC_012695.1 3269793 3270953 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family complement(3269793..3270953) Burkholderia pseudomallei MSHR346 7890651 YP_002898068.1 CDS GBP346_A3394 NC_012695.1 3270950 3271894 R hypothetical protein complement(3270950..3271894) Burkholderia pseudomallei MSHR346 7890318 YP_002898069.1 CDS GBP346_A3395 NC_012695.1 3271891 3272427 R identified by match to protein family HMM PF00132; serine O-acetyltransferase complement(3271891..3272427) Burkholderia pseudomallei MSHR346 7887220 YP_002898070.1 CDS GBP346_A3396 NC_012695.1 3272429 3273625 R identified by match to protein family HMM PF05159; capsule polysaccharide biosynthesis protein complement(3272429..3273625) Burkholderia pseudomallei MSHR346 7887860 YP_002898071.1 CDS GBP346_A3397 NC_012695.1 3273658 3274932 R identified by match to protein family HMM PF01943; hypothetical protein complement(3273658..3274932) Burkholderia pseudomallei MSHR346 7889558 YP_002898072.1 CDS GBP346_A3398 NC_012695.1 3274993 3277233 R identified by match to protein family HMM PF02706; match to protein family HMM TIGR01005; match to protein family HMM TIGR01007; exopolysaccharide transport protein family protein complement(3274993..3277233) Burkholderia pseudomallei MSHR346 7890285 YP_002898073.1 CDS GBP346_A3399 NC_012695.1 3277275 3277709 R identified by match to protein family HMM PF01451; protein tyrosine phosphatase complement(3277275..3277709) Burkholderia pseudomallei MSHR346 7886818 YP_002898074.1 CDS GBP346_A3400 NC_012695.1 3277706 3278974 R identified by match to protein family HMM PF02563; polysaccharide biosynthesis/export protein complement(3277706..3278974) Burkholderia pseudomallei MSHR346 7887983 YP_002898075.1 CDS GBP346_A3401 NC_012695.1 3278971 3280119 R identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025; sugar transferase family protein complement(3278971..3280119) Burkholderia pseudomallei MSHR346 7888881 YP_002898076.1 CDS GBP346_A3403 NC_012695.1 3280111 3280278 D hypothetical protein 3280111..3280278 Burkholderia pseudomallei MSHR346 7890877 YP_002898077.1 CDS GBP346_A3402 NC_012695.1 3280273 3281340 R identified by match to protein family HMM PF00165; transcriptional regulator, AraC family complement(3280273..3281340) Burkholderia pseudomallei MSHR346 7890380 YP_002898078.1 CDS GBP346_A3404 NC_012695.1 3281281 3281430 D identified by glimmer; putative; hypothetical protein 3281281..3281430 Burkholderia pseudomallei MSHR346 7890554 YP_002898079.1 CDS GBP346_A3405 NC_012695.1 3281601 3281825 D hypothetical protein 3281601..3281825 Burkholderia pseudomallei MSHR346 7888494 YP_002898080.1 CDS GBP346_A3406 NC_012695.1 3281909 3282040 R hypothetical protein complement(3281909..3282040) Burkholderia pseudomallei MSHR346 7889962 YP_002898081.1 CDS GBP346_A3407 NC_012695.1 3282108 3282680 D identified by match to protein family HMM PF01569; membrane protein, PAP2 family 3282108..3282680 Burkholderia pseudomallei MSHR346 7888537 YP_002898082.1 CDS GBP346_A3408 NC_012695.1 3282877 3284235 D hypothetical protein 3282877..3284235 Burkholderia pseudomallei MSHR346 7890611 YP_002898083.1 CDS GBP346_A3410 NC_012695.1 3284277 3285449 D identified by match to protein family HMM PF02012; BNR/Asp-box repeat protein 3284277..3285449 Burkholderia pseudomallei MSHR346 7890148 YP_002898084.1 CDS GBP346_A3409 NC_012695.1 3285403 3285804 R identified by glimmer; putative; hypothetical protein complement(3285403..3285804) Burkholderia pseudomallei MSHR346 7886806 YP_002898085.1 CDS GBP346_A3411 NC_012695.1 3285910 3286608 R putative acetyltransferase protein complement(3285910..3286608) Burkholderia pseudomallei MSHR346 7889083 YP_002898086.1 CDS GBP346_A3412 NC_012695.1 3286617 3287936 R identified by match to protein family HMM PF00155; putative 8-amino-7-oxononanoate synthase complement(3286617..3287936) Burkholderia pseudomallei MSHR346 7889397 YP_002898087.1 CDS lpxC_1 NC_012695.1 3288001 3288918 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3288001..3288918) Burkholderia pseudomallei MSHR346 7889432 YP_002898088.1 CDS GBP346_A3414 NC_012695.1 3288915 3296549 R identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08242; match to protein family HMM PF08659; putative polyketide synthase, type I complement(3288915..3296549) Burkholderia pseudomallei MSHR346 7888279 YP_002898089.1 CDS GBP346_A3415 NC_012695.1 3296552 3298084 R identified by match to protein family HMM PF00884; putative capsular polysaccharide biosynthesis protein WcbQ complement(3296552..3298084) Burkholderia pseudomallei MSHR346 7890304 YP_002898090.1 CDS GBP346_A3416 NC_012695.1 3298086 3298874 R identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short-chain dehydrogenase/reductase family complement(3298086..3298874) Burkholderia pseudomallei MSHR346 7889030 YP_002898091.1 CDS GBP346_A3417 NC_012695.1 3298871 3300160 R identified by match to protein family HMM PF05159; capsule polysaccharide biosynthesis protein complement(3298871..3300160) Burkholderia pseudomallei MSHR346 7888030 YP_002898092.1 CDS GBP346_A3418 NC_012695.1 3300340 3300909 R identified by match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; D,D-heptose 1,7-bisphosphate phosphatase complement(3300340..3300909) Burkholderia pseudomallei MSHR346 7887485 YP_002898093.1 CDS GBP346_A3419 NC_012695.1 3300906 3301598 R identified by match to protein family HMM PF00483; D-glycero-D-manno-heptose 1-phosphate guanosyltransferase complement(3300906..3301598) Burkholderia pseudomallei MSHR346 7890441 YP_002898094.1 CDS GBP346_A3420 NC_012695.1 3301600 3302178 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(3301600..3302178) Burkholderia pseudomallei MSHR346 7889454 YP_002898095.1 CDS GBP346_A3421 NC_012695.1 3302175 3303215 R identified by match to protein family HMM PF00288; match to protein family HMM PF08544; D-glycero-D-manno-heptose 7-phosphate kinase complement(3302175..3303215) Burkholderia pseudomallei MSHR346 7889376 YP_002898096.1 CDS GBP346_A3422 NC_012695.1 3303231 3304244 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; GDP-4-dehydro-6-deoxy-D-mannose reductase complement(3303231..3304244) Burkholderia pseudomallei MSHR346 7888678 YP_002898097.1 CDS GBP346_A3423 NC_012695.1 3304254 3305096 R identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein complement(3304254..3305096) Burkholderia pseudomallei MSHR346 7887789 YP_002898098.1 CDS GBP346_A3424 NC_012695.1 3305093 3305755 R capsular polysaccharide biosynthesis protein complement(3305093..3305755) Burkholderia pseudomallei MSHR346 7889119 YP_002898099.1 CDS GBP346_A3425 NC_012695.1 3306046 3307842 R identified by match to protein family HMM PF00534; WcbH complement(3306046..3307842) Burkholderia pseudomallei MSHR346 7889574 YP_002898100.1 CDS GBP346_A3426 NC_012695.1 3307839 3308690 R putative capsular polysaccharide biosynthesis protein complement(3307839..3308690) Burkholderia pseudomallei MSHR346 7886875 YP_002898101.1 CDS GBP346_A3428 NC_012695.1 3308652 3308819 D identified by glimmer; putative; hypothetical protein 3308652..3308819 Burkholderia pseudomallei MSHR346 7890657 YP_002898102.1 CDS GBP346_A3427 NC_012695.1 3308790 3310040 R WcbF complement(3308790..3310040) Burkholderia pseudomallei MSHR346 7889715 YP_002898103.1 CDS GBP346_A3429 NC_012695.1 3310135 3311658 R identified by match to protein family HMM PF00534; glycosyl transferase, group 1 complement(3310135..3311658) Burkholderia pseudomallei MSHR346 7888917 YP_002898104.1 CDS GBP346_A3430 NC_012695.1 3311691 3312347 R identified by match to protein family HMM PF00005; Wzt2 complement(3311691..3312347) Burkholderia pseudomallei MSHR346 7888061 YP_002898105.1 CDS GBP346_A3431 NC_012695.1 3312344 3313126 R identified by match to protein family HMM PF01061; capsular polysaccharide export inner-membrane protein complement(3312344..3313126) Burkholderia pseudomallei MSHR346 7888054 YP_002898106.1 CDS GBP346_A3432 NC_012695.1 3313133 3314680 R capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family complement(3313133..3314680) Burkholderia pseudomallei MSHR346 7887447 YP_002898107.1 CDS GBP346_A3433 NC_012695.1 3314762 3315925 R identified by match to protein family HMM PF02563; capsule polysaccharide export protein, BexD/CtrA/VexA family complement(3314762..3315925) Burkholderia pseudomallei MSHR346 7887966 YP_002898108.1 CDS GBP346_A3434 NC_012695.1 3316175 3317257 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 3316175..3317257 Burkholderia pseudomallei MSHR346 7886988 YP_002898109.1 CDS GBP346_A3435 NC_012695.1 3317300 3317416 R hypothetical protein complement(3317300..3317416) Burkholderia pseudomallei MSHR346 7890662 YP_002898110.1 CDS GBP346_A3436 NC_012695.1 3317537 3319273 D identified by match to protein family HMM PF05159; WcbA 3317537..3319273 Burkholderia pseudomallei MSHR346 7890577 YP_002898111.1 CDS GBP346_A3437 NC_012695.1 3319672 3321099 D identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3319672..3321099 Burkholderia pseudomallei MSHR346 7890531 YP_002898112.1 CDS GBP346_A3438 NC_012695.1 3321237 3321368 R hypothetical protein complement(3321237..3321368) Burkholderia pseudomallei MSHR346 7886888 YP_002898113.1 CDS GBP346_A3439 NC_012695.1 3321370 3322206 D identified by match to protein family HMM PF00310; YafJ 3321370..3322206 Burkholderia pseudomallei MSHR346 7890649 YP_002898114.1 CDS GBP346_A3440 NC_012695.1 3322317 3323144 D identified by match to protein family HMM PF00924; transporter, MscS family 3322317..3323144 Burkholderia pseudomallei MSHR346 7890088 YP_002898115.1 CDS GBP346_A3441 NC_012695.1 3323265 3323381 R hypothetical protein complement(3323265..3323381) Burkholderia pseudomallei MSHR346 7890202 YP_002898116.1 CDS GBP346_A3442 NC_012695.1 3323465 3324145 R identified by match to protein family HMM PF09335; membrane protein, DedA family complement(3323465..3324145) Burkholderia pseudomallei MSHR346 7887590 YP_002898117.1 CDS mutL NC_012695.1 3324330 3326375 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3324330..3326375 Burkholderia pseudomallei MSHR346 7887125 YP_002898118.1 CDS miaA NC_012695.1 3326372 3327346 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3326372..3327346 Burkholderia pseudomallei MSHR346 7889857 YP_002898119.1 CDS GBP346_A3445 NC_012695.1 3327364 3327765 R identified by match to protein family HMM TIGR02246; hypothetical protein complement(3327364..3327765) Burkholderia pseudomallei MSHR346 7888882 YP_002898120.1 CDS purM NC_012695.1 3328199 3329254 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3328199..3329254) Burkholderia pseudomallei MSHR346 7888461 YP_002898121.1 CDS GBP346_A3447 NC_012695.1 3329253 3330278 D identified by match to protein family HMM PF00308; match to protein family HMM TIGR03420; DnaA regulatory inactivator Hda 3329253..3330278 Burkholderia pseudomallei MSHR346 7890848 YP_002898122.1 CDS GBP346_A3448 NC_012695.1 3330300 3330986 D identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily subfamily IB hydrolase 3330300..3330986 Burkholderia pseudomallei MSHR346 7888549 YP_002898123.1 CDS GBP346_A3449 NC_012695.1 3330983 3332530 D identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942; poly(A) polymerase (PAP) (Plasmid copy number protein) 3330983..3332530 Burkholderia pseudomallei MSHR346 7887724 YP_002898124.1 CDS folK NC_012695.1 3332567 3333094 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 3332567..3333094 Burkholderia pseudomallei MSHR346 7889310 YP_002898125.1 CDS GBP346_A3451 NC_012695.1 3333085 3333774 D identified by match to protein family HMM PF01712; deoxynucleoside kinase family protein 3333085..3333774 Burkholderia pseudomallei MSHR346 7888509 YP_002898126.1 CDS panB NC_012695.1 3333839 3334654 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3333839..3334654 Burkholderia pseudomallei MSHR346 7887179 YP_002898127.1 CDS GBP346_A3453 NC_012695.1 3334830 3336836 R identified by match to protein family HMM PF00425; PabB complement(3334830..3336836) Burkholderia pseudomallei MSHR346 7887140 YP_002898128.1 CDS dnaJ NC_012695.1 3336870 3338000 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(3336870..3338000) Burkholderia pseudomallei MSHR346 7890191 YP_002898129.1 CDS GBP346_A3455 NC_012695.1 3338010 3338174 D hypothetical protein 3338010..3338174 Burkholderia pseudomallei MSHR346 7887845 YP_002898130.1 CDS dnaK NC_012695.1 3338267 3340219 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3338267..3340219) Burkholderia pseudomallei MSHR346 7889540 YP_002898131.1 CDS GBP346_A3457 NC_012695.1 3340355 3340636 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; thioredoxin family protein complement(3340355..3340636) Burkholderia pseudomallei MSHR346 7888409 YP_002898132.1 CDS grpE NC_012695.1 3340801 3341358 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3340801..3341358) Burkholderia pseudomallei MSHR346 7888604 YP_002898133.1 CDS GBP346_A3460 NC_012695.1 3341722 3341883 D hypothetical protein 3341722..3341883 Burkholderia pseudomallei MSHR346 7890181 YP_002898134.1 CDS GBP346_A3459 NC_012695.1 3341855 3342262 R identified by match to protein family HMM PF01479; heat shock protein 15 complement(3341855..3342262) Burkholderia pseudomallei MSHR346 7888075 YP_002898135.1 CDS hemH NC_012695.1 3342268 3343371 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(3342268..3343371) Burkholderia pseudomallei MSHR346 7890596 YP_002898136.1 CDS hrcA NC_012695.1 3343544 3344761 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3343544..3344761) Burkholderia pseudomallei MSHR346 7887204 YP_002898137.1 CDS ppnK NC_012695.1 3344565 3345602 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 3344565..3345602 Burkholderia pseudomallei MSHR346 7886791 YP_002898138.1 CDS recN NC_012695.1 3345632 3347281 D identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 3345632..3347281 Burkholderia pseudomallei MSHR346 7886803 YP_002898139.1 CDS glnE NC_012695.1 3347650 3350427 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3347650..3350427) Burkholderia pseudomallei MSHR346 7889082 YP_002898140.1 CDS GBP346_A3466 NC_012695.1 3350594 3354787 D identified by match to protein family HMM TIGR02099; hypothetical protein 3350594..3354787 Burkholderia pseudomallei MSHR346 7890161 YP_002898141.1 CDS GBP346_A3467 NC_012695.1 3354839 3355666 D identified by match to protein family HMM PF00795; hydrolase Sll0601 3354839..3355666 Burkholderia pseudomallei MSHR346 7890844 YP_002898142.1 CDS GBP346_A3468 NC_012695.1 3355746 3357242 D identified by match to protein family HMM PF01523; TldD protein 3355746..3357242 Burkholderia pseudomallei MSHR346 7888851 YP_002898143.1 CDS GBP346_A3469 NC_012695.1 3357242 3357463 D hypothetical protein 3357242..3357463 Burkholderia pseudomallei MSHR346 7888228 YP_002898144.1 CDS GBP346_A3470 NC_012695.1 3357460 3358725 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3357460..3358725 Burkholderia pseudomallei MSHR346 7890916 YP_002898145.1 CDS GBP346_A3471 NC_012695.1 3359004 3360212 R identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase NAD-binding domain protein complement(3359004..3360212) Burkholderia pseudomallei MSHR346 7887095 YP_002898146.1 CDS GBP346_A3472 NC_012695.1 3360324 3360899 R identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase complement(3360324..3360899) Burkholderia pseudomallei MSHR346 7888946 YP_002898147.1 CDS GBP346_A3473 NC_012695.1 3361060 3362469 D identified by match to protein family HMM PF01565; match to protein family HMM PF02913; D-lactate dehydrogenase (cytochrome) 3361060..3362469 Burkholderia pseudomallei MSHR346 7889243 YP_002898148.1 CDS GBP346_A3474 NC_012695.1 3362534 3364027 D identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase, subunit GlcD 3362534..3364027 Burkholderia pseudomallei MSHR346 7889906 YP_002898149.1 CDS glcE NC_012695.1 3364129 3365217 D identified by match to protein family HMM PF01565; glycolate oxidase FAD binding subunit 3364129..3365217 Burkholderia pseudomallei MSHR346 7889852 YP_002898150.1 CDS glcF NC_012695.1 3365224 3366450 D identified by match to protein family HMM PF02754; glycolate oxidase iron-sulfur subunit 3365224..3366450 Burkholderia pseudomallei MSHR346 7888386 YP_002898151.1 CDS GBP346_A3477 NC_012695.1 3366710 3367408 D identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family 3366710..3367408 Burkholderia pseudomallei MSHR346 7888812 YP_002898152.1 CDS proC NC_012695.1 3367443 3368255 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3367443..3368255 Burkholderia pseudomallei MSHR346 7889985 YP_002898153.1 CDS phnE NC_012695.1 3368703 3369518 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097; phosphonate ABC transporter, permease protein PhnE complement(3368703..3369518) Burkholderia pseudomallei MSHR346 7890375 YP_002898154.1 CDS phnD NC_012695.1 3369515 3370510 R identified by match to protein family HMM TIGR01098; match to protein family HMM TIGR03431; phosphonate ABC transporter, periplasmic phosphonate binding protein complement(3369515..3370510) Burkholderia pseudomallei MSHR346 7888465 YP_002898155.1 CDS phnC NC_012695.1 3370593 3371516 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02315; phosphonate ABC transporter, ATP-binding protein complement(3370593..3371516) Burkholderia pseudomallei MSHR346 7887222 YP_002898156.1 CDS phnM NC_012695.1 3371750 3372883 R identified by match to protein family HMM PF07969; match to protein family HMM TIGR02318; phosphonate metabolism protein PhnM complement(3371750..3372883) Burkholderia pseudomallei MSHR346 7887732 YP_002898157.1 CDS phnL NC_012695.1 3372895 3373692 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02324; phosphonate C-P lyase system protein PhnL complement(3372895..3373692) Burkholderia pseudomallei MSHR346 7889518 YP_002898158.1 CDS phnK NC_012695.1 3373701 3374471 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02323; phosphonate C-P lyase system protein PhnK complement(3373701..3374471) Burkholderia pseudomallei MSHR346 7887616 YP_002898159.1 CDS phnJ NC_012695.1 3374468 3375442 R identified by match to protein family HMM PF06007; phosphonate metabolism protein PhnJ complement(3374468..3375442) Burkholderia pseudomallei MSHR346 7890629 YP_002898160.1 CDS GBP346_A3486 NC_012695.1 3375439 3376653 R identified by match to protein family HMM PF05861; phosphonate metabolism protein complement(3375439..3376653) Burkholderia pseudomallei MSHR346 7889415 YP_002898161.1 CDS phnH NC_012695.1 3376647 3377276 R identified by match to protein family HMM PF05845; match to protein family HMM TIGR03292; carbon-phosphorus lyase complex subunit complement(3376647..3377276) Burkholderia pseudomallei MSHR346 7889918 YP_002898162.1 CDS phnG NC_012695.1 3377273 3377821 R identified by match to protein family HMM PF06754; match to protein family HMM TIGR03293; phosphonate C-P lyase system protein PhnG complement(3377273..3377821) Burkholderia pseudomallei MSHR346 7888504 YP_002898163.1 CDS phnF NC_012695.1 3377996 3378772 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02325; phosphonate metabolism transcriptional regulator PhnF 3377996..3378772 Burkholderia pseudomallei MSHR346 7886760 YP_002898164.1 CDS GBP346_A3490 NC_012695.1 3378762 3379559 D identified by match to protein family HMM PF06299; match to protein family HMM TIGR03223; putative phosphonate metabolism protein 3378762..3379559 Burkholderia pseudomallei MSHR346 7890378 YP_002898165.1 CDS phnN NC_012695.1 3379556 3380110 D identified by match to protein family HMM TIGR02322; phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn 3379556..3380110 Burkholderia pseudomallei MSHR346 7887846 YP_002898166.1 CDS ubiA NC_012695.1 3380526 3381389 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(3380526..3381389) Burkholderia pseudomallei MSHR346 7890812 YP_002898167.1 CDS GBP346_A3493 NC_012695.1 3381915 3382379 R identified by match to protein family HMM PF01638; transcriptional regulatory protein complement(3381915..3382379) Burkholderia pseudomallei MSHR346 7890392 YP_002898168.1 CDS GBP346_A3494 NC_012695.1 3382453 3382623 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulatory protein complement(3382453..3382623) Burkholderia pseudomallei MSHR346 7887878 YP_002898169.1 CDS GBP346_A3495 NC_012695.1 3382736 3383224 R identified by match to protein family HMM PF00210; DpsA complement(3382736..3383224) Burkholderia pseudomallei MSHR346 7888186 YP_002898170.1 CDS GBP346_A3496 NC_012695.1 3383244 3383381 D hypothetical protein 3383244..3383381 Burkholderia pseudomallei MSHR346 7886994 YP_002898171.1 CDS GBP346_A3497 NC_012695.1 3383424 3383588 R identified by glimmer; putative; hypothetical protein complement(3383424..3383588) Burkholderia pseudomallei MSHR346 7889254 YP_002898172.1 CDS katG NC_012695.1 3383696 3385882 R identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI complement(3383696..3385882) Burkholderia pseudomallei MSHR346 7887364 YP_002898173.1 CDS GBP346_A3499 NC_012695.1 3385853 3385981 D hypothetical protein 3385853..3385981 Burkholderia pseudomallei MSHR346 7890184 YP_002898174.1 CDS GBP346_A3500 NC_012695.1 3386368 3387327 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; oxidative stress regulatory protein OxyR complement(3386368..3387327) Burkholderia pseudomallei MSHR346 7887791 YP_002898175.1 CDS recG NC_012695.1 3387463 3390183 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3387463..3390183) Burkholderia pseudomallei MSHR346 7889486 YP_002898176.1 CDS queA NC_012695.1 3390338 3391420 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3390338..3391420 Burkholderia pseudomallei MSHR346 7888261 YP_002898177.1 CDS tgt NC_012695.1 3391713 3392897 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3391713..3392897 Burkholderia pseudomallei MSHR346 7888722 YP_002898178.1 CDS GBP346_A3504 NC_012695.1 3393077 3393241 D identified by glimmer; putative; hypothetical protein 3393077..3393241 Burkholderia pseudomallei MSHR346 7887373 YP_002898179.1 CDS yajC NC_012695.1 3393332 3393658 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3393332..3393658 Burkholderia pseudomallei MSHR346 7890891 YP_002898180.1 CDS secD NC_012695.1 3393765 3395792 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3393765..3395792 Burkholderia pseudomallei MSHR346 7890396 YP_002898181.1 CDS secF NC_012695.1 3395808 3396758 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3395808..3396758 Burkholderia pseudomallei MSHR346 7887876 YP_002898182.1 CDS GBP346_A3508 NC_012695.1 3397003 3398583 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter complement(3397003..3398583) Burkholderia pseudomallei MSHR346 7890399 YP_002898183.1 CDS GBP346_A3509 NC_012695.1 3398612 3399190 R identified by match to protein family HMM PF04264; YceI complement(3398612..3399190) Burkholderia pseudomallei MSHR346 7889288 YP_002898184.1 CDS GBP346_A3510 NC_012695.1 3399257 3399817 R identified by match to protein family HMM PF04264; hypothetical protein complement(3399257..3399817) Burkholderia pseudomallei MSHR346 7890737 YP_002898185.1 CDS GBP346_A3511 NC_012695.1 3399829 3400392 R identified by match to protein family HMM PF01292; cytochrome B561 complement(3399829..3400392) Burkholderia pseudomallei MSHR346 7888738 YP_002898186.1 CDS GBP346_A3512 NC_012695.1 3400391 3400591 D hypothetical protein 3400391..3400591 Burkholderia pseudomallei MSHR346 7890635 YP_002898187.1 CDS GBP346_A3513 NC_012695.1 3400657 3401313 D identified by match to protein family HMM PF04403; paraquat-inducible protein A 3400657..3401313 Burkholderia pseudomallei MSHR346 7890713 YP_002898188.1 CDS GBP346_A3514 NC_012695.1 3401310 3401972 D identified by match to protein family HMM PF04403; paraquat-inducible protein A 3401310..3401972 Burkholderia pseudomallei MSHR346 7889869 YP_002898189.1 CDS GBP346_A3515 NC_012695.1 3402052 3403620 D identified by match to protein family HMM PF02470; paraquat-inducible protein 3402052..3403620 Burkholderia pseudomallei MSHR346 7888222 YP_002898190.1 CDS GBP346_A3516 NC_012695.1 3403617 3404387 D identified by match to protein family HMM PF03886; putative lipoprotein 3403617..3404387 Burkholderia pseudomallei MSHR346 7890321 YP_002898191.1 CDS GBP346_A3517 NC_012695.1 3404953 3405069 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3404953..3405069) Burkholderia pseudomallei MSHR346 7887769 YP_002898192.1 CDS GBP346_A3518 NC_012695.1 3405090 3405206 R identified by glimmer; putative; hypothetical protein complement(3405090..3405206) Burkholderia pseudomallei MSHR346 7887818 YP_002898193.1 CDS GBP346_A3519 NC_012695.1 3405306 3407423 D hypothetical protein 3405306..3407423 Burkholderia pseudomallei MSHR346 7887332 YP_002898194.1 CDS GBP346_A3520 NC_012695.1 3407592 3408884 D identified by match to protein family HMM PF01170; match to protein family HMM PF02926; thump domain protein 3407592..3408884 Burkholderia pseudomallei MSHR346 7890451 YP_002898195.1 CDS GBP346_A3521 NC_012695.1 3408917 3409474 D hypothetical protein 3408917..3409474 Burkholderia pseudomallei MSHR346 7887527 YP_002898196.1 CDS GBP346_A3522 NC_012695.1 3409632 3410144 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3409632..3410144) Burkholderia pseudomallei MSHR346 7889263 YP_002898197.1 CDS GBP346_A3523 NC_012695.1 3410282 3410692 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; glyoxalase family protein 3410282..3410692 Burkholderia pseudomallei MSHR346 7887387 YP_002898198.1 CDS GBP346_A3524 NC_012695.1 3410856 3411893 D identified by match to protein family HMM PF08279; putative transcriptional regulator 3410856..3411893 Burkholderia pseudomallei MSHR346 7888337 YP_002898199.1 CDS GBP346_A3525 NC_012695.1 3412250 3412363 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3412250..3412363) Burkholderia pseudomallei MSHR346 7886802 YP_002898200.1 CDS GBP346_A3526 NC_012695.1 3412490 3413950 R identified by match to protein family HMM PF02233; NAD(P) transhydrogenase, beta subunit complement(3412490..3413950) Burkholderia pseudomallei MSHR346 7888498 YP_002898201.1 CDS GBP346_A3527 NC_012695.1 3413947 3414276 R NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) complement(3413947..3414276) Burkholderia pseudomallei MSHR346 7889821 YP_002898202.1 CDS GBP346_A3528 NC_012695.1 3414289 3415428 R identified by match to protein family HMM PF01262; match to protein family HMM PF05222; NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) complement(3414289..3415428) Burkholderia pseudomallei MSHR346 7888191 YP_002898203.1 CDS GBP346_A3529 NC_012695.1 3415672 3416181 D identified by match to protein family HMM PF00293; hydrolase, nudix family 3415672..3416181 Burkholderia pseudomallei MSHR346 7886703 YP_002898204.1 CDS mnmA NC_012695.1 3416178 3417329 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3416178..3417329 Burkholderia pseudomallei MSHR346 7887280 YP_002898205.1 CDS GBP346_A3531 NC_012695.1 3417451 3419091 D identified by match to protein family HMM PF01645; glutamate synthase domain protein 3417451..3419091 Burkholderia pseudomallei MSHR346 7890540 YP_002898206.1 CDS GBP346_A3532 NC_012695.1 3419360 3419971 R identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase complement(3419360..3419971) Burkholderia pseudomallei MSHR346 7890933 YP_002898207.1 CDS GBP346_A3533 NC_012695.1 3420017 3420469 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3420017..3420469) Burkholderia pseudomallei MSHR346 7889677 YP_002898208.1 CDS pepP NC_012695.1 3420521 3421930 D identified by match to protein family HMM PF00557; match to protein family HMM PF05195; Xaa-Pro aminopeptidase 3420521..3421930 Burkholderia pseudomallei MSHR346 7887800 YP_002898209.1 CDS GBP346_A3535 NC_012695.1 3421927 3423168 D identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; hypothetical protein 3421927..3423168 Burkholderia pseudomallei MSHR346 7889814 YP_002898210.1 CDS GBP346_A3536 NC_012695.1 3423376 3424440 D identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; tRNA-dihydrouridine synthase B 3423376..3424440 Burkholderia pseudomallei MSHR346 7888286 YP_002898211.1 CDS GBP346_A3537 NC_012695.1 3424437 3424670 D identified by match to protein family HMM PF02954; DNA-binding protein Fis 3424437..3424670 Burkholderia pseudomallei MSHR346 7890572 YP_002898212.1 CDS purH NC_012695.1 3424715 3426280 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3424715..3426280 Burkholderia pseudomallei MSHR346 7890669 YP_002898213.1 CDS GBP346_A3538 NC_012695.1 3426274 3426627 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3426274..3426627) Burkholderia pseudomallei MSHR346 7890239 YP_002898214.1 CDS ruvC NC_012695.1 3426647 3427189 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3426647..3427189 Burkholderia pseudomallei MSHR346 7887801 YP_002898215.1 CDS ruvA NC_012695.1 3427263 3427844 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3427263..3427844 Burkholderia pseudomallei MSHR346 7889234 YP_002898216.1 CDS ruvB NC_012695.1 3428012 3429082 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3428012..3429082 Burkholderia pseudomallei MSHR346 7889787 YP_002898217.1 CDS GBP346_A3543 NC_012695.1 3429108 3430064 D hypothetical protein 3429108..3430064 Burkholderia pseudomallei MSHR346 7886928 YP_002898218.1 CDS GBP346_A3544 NC_012695.1 3430196 3431338 D identified by match to protein family HMM PF08857; putative lipoprotein 3430196..3431338 Burkholderia pseudomallei MSHR346 7888479 YP_002898219.1 CDS GBP346_A3545 NC_012695.1 3431494 3432156 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(3431494..3432156) Burkholderia pseudomallei MSHR346 7889132 YP_002898220.1 CDS dtd NC_012695.1 3432191 3432724 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3432191..3432724) Burkholderia pseudomallei MSHR346 7890929 YP_002898221.1 CDS tyrS NC_012695.1 3432741 3434048 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3432741..3434048) Burkholderia pseudomallei MSHR346 7890432 YP_002898222.1 CDS anmK NC_012695.1 3434160 3435323 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3434160..3435323 Burkholderia pseudomallei MSHR346 7889315 YP_002898223.1 CDS GBP346_A3549 NC_012695.1 3435429 3436127 R identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase complement(3435429..3436127) Burkholderia pseudomallei MSHR346 7887695 YP_002898224.1 CDS GBP346_A3550 NC_012695.1 3436132 3436836 R identified by match to protein family HMM PF02798; glutathione S-transferase domain protein complement(3436132..3436836) Burkholderia pseudomallei MSHR346 7888627 YP_002898225.1 CDS GBP346_A3551 NC_012695.1 3436896 3437831 D identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 3436896..3437831 Burkholderia pseudomallei MSHR346 7889993 YP_002898226.1 CDS GBP346_A3552 NC_012695.1 3437970 3439190 R identified by match to protein family HMM PF01610; transposase complement(3437970..3439190) Burkholderia pseudomallei MSHR346 7890019 YP_002898227.1 CDS GBP346_A3553 NC_012695.1 3439320 3439688 R essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA complement(3439320..3439688) Burkholderia pseudomallei MSHR346 7890547 YP_002898228.1 CDS rpsI NC_012695.1 3439895 3440287 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3439895..3440287) Burkholderia pseudomallei MSHR346 7888205 YP_002898229.1 CDS rplM NC_012695.1 3440299 3440838 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3440299..3440838) Burkholderia pseudomallei MSHR346 7886952 YP_002898230.1 CDS GBP346_A3556 NC_012695.1 3441031 3441195 D hypothetical protein 3441031..3441195 Burkholderia pseudomallei MSHR346 7886962 YP_002898231.1 CDS GBP346_A3557 NC_012695.1 3441355 3441819 D identified by match to protein family HMM PF02566; OsmC/Ohr family protein 3441355..3441819 Burkholderia pseudomallei MSHR346 7888598 YP_002898232.1 CDS GBP346_A3559 NC_012695.1 3442486 3443601 R hypothetical protein complement(3442486..3443601) Burkholderia pseudomallei MSHR346 7889166 YP_002898233.1 CDS pyrC NC_012695.1 3443678 3444736 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3443678..3444736) Burkholderia pseudomallei MSHR346 7888613 YP_002898234.1 CDS GBP346_A3561 NC_012695.1 3444733 3444891 R hypothetical protein complement(3444733..3444891) Burkholderia pseudomallei MSHR346 7889603 YP_002898235.1 CDS GBP346_A3562 NC_012695.1 3444910 3445860 D identified by match to protein family HMM PF00310; glutamine amidotransferase class-II 3444910..3445860 Burkholderia pseudomallei MSHR346 7890898 YP_002898236.1 CDS GBP346_A3563 NC_012695.1 3445982 3446185 R hypothetical protein complement(3445982..3446185) Burkholderia pseudomallei MSHR346 7887759 YP_002898237.1 CDS GBP346_A3564 NC_012695.1 3446307 3446528 R hypothetical protein complement(3446307..3446528) Burkholderia pseudomallei MSHR346 7889642 YP_002898238.1 CDS GBP346_A3565 NC_012695.1 3447021 3447440 R identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family complement(3447021..3447440) Burkholderia pseudomallei MSHR346 7886856 YP_002898239.1 CDS GBP346_A3566 NC_012695.1 3447506 3447946 R identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family complement(3447506..3447946) Burkholderia pseudomallei MSHR346 7887264 YP_002898240.1 CDS GBP346_A3567 NC_012695.1 3448082 3448210 R identified by glimmer; putative; hypothetical protein complement(3448082..3448210) Burkholderia pseudomallei MSHR346 7890691 YP_002898241.1 CDS groS_2 NC_012695.1 3448408 3448725 D identified by match to protein family HMM PF00166; chaperonin GroS 3448408..3448725 Burkholderia pseudomallei MSHR346 7889128 YP_002898242.1 CDS groEL NC_012695.1 3448832 3450451 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 3448832..3450451 Burkholderia pseudomallei MSHR346 7887927 YP_002898243.1 CDS GBP346_A3570 NC_012695.1 3450469 3450582 D hypothetical protein 3450469..3450582 Burkholderia pseudomallei MSHR346 7886921 YP_002898244.1 CDS GBP346_A3571 NC_012695.1 3450573 3450827 D hypothetical protein 3450573..3450827 Burkholderia pseudomallei MSHR346 7889765 YP_002898245.1 CDS GBP346_A3572 NC_012695.1 3450881 3452101 R identified by match to protein family HMM PF01610; transposase complement(3450881..3452101) Burkholderia pseudomallei MSHR346 7890336 YP_002898246.1 CDS gltL_2 NC_012695.1 3452251 3452976 R identified by match to protein family HMM PF00005; glutamate/aspartate ABC transporter, ATP-binding protein complement(3452251..3452976) Burkholderia pseudomallei MSHR346 7888055 YP_002898247.1 CDS GBP346_A3574 NC_012695.1 3452973 3453650 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate/aspartate ABC transporter, permease protein GltK complement(3452973..3453650) Burkholderia pseudomallei MSHR346 7887667 YP_002898248.1 CDS GBP346_A3575 NC_012695.1 3453650 3454390 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate/aspartate ABC transporter, permease protein GltJ complement(3453650..3454390) Burkholderia pseudomallei MSHR346 7887543 YP_002898249.1 CDS GBP346_A3576 NC_012695.1 3454473 3455459 R identified by match to protein family HMM PF00497; glutamate/aspartate periplasmic-binding protein complement(3454473..3455459) Burkholderia pseudomallei MSHR346 7887639 YP_002898250.1 CDS GBP346_A3577 NC_012695.1 3455599 3456903 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase (GDH) complement(3455599..3456903) Burkholderia pseudomallei MSHR346 7889269 YP_002898251.1 CDS GBP346_A3578 NC_012695.1 3456902 3457159 D hypothetical protein 3456902..3457159 Burkholderia pseudomallei MSHR346 7889916 YP_002898252.1 CDS GBP346_A3579 NC_012695.1 3457284 3458234 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(3457284..3458234) Burkholderia pseudomallei MSHR346 7888927 YP_002898253.1 CDS GBP346_A3580 NC_012695.1 3458401 3458568 R identified by glimmer; putative; hypothetical protein complement(3458401..3458568) Burkholderia pseudomallei MSHR346 7887334 YP_002898254.1 CDS GBP346_A3581 NC_012695.1 3458703 3460109 D identified by match to protein family HMM PF07690; nitrate transporter 3458703..3460109 Burkholderia pseudomallei MSHR346 7888615 YP_002898255.1 CDS purB NC_012695.1 3460217 3461605 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3460217..3461605 Burkholderia pseudomallei MSHR346 7889982 YP_002898256.1 CDS aroK_1 NC_012695.1 3461699 3462217 R identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313; shikimate kinase complement(3461699..3462217) Burkholderia pseudomallei MSHR346 7888542 YP_002898257.1 CDS GBP346_A3584 NC_012695.1 3462231 3463592 R identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; transporter, gluconate:H+ symporter (GntP) family complement(3462231..3463592) Burkholderia pseudomallei MSHR346 7889556 YP_002898258.1 CDS GBP346_A3585 NC_012695.1 3463578 3463694 D hypothetical protein 3463578..3463694 Burkholderia pseudomallei MSHR346 7887880 YP_002898259.1 CDS GBP346_A3586 NC_012695.1 3463812 3464438 R identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; khg/kdpg aldolase complement(3463812..3464438) Burkholderia pseudomallei MSHR346 7890761 YP_002898260.1 CDS edd NC_012695.1 3464460 3466313 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3464460..3466313) Burkholderia pseudomallei MSHR346 7888181 YP_002898261.1 CDS GBP346_A3588 NC_012695.1 3466299 3466490 D hypothetical protein 3466299..3466490 Burkholderia pseudomallei MSHR346 7889440 YP_002898262.1 CDS GBP346_A3589 NC_012695.1 3466611 3467609 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; HTH-type transcriptional regulator HexR 3466611..3467609 Burkholderia pseudomallei MSHR346 7890468 YP_002898263.1 CDS GBP346_A3591 NC_012695.1 3467703 3468104 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3467703..3468104 Burkholderia pseudomallei MSHR346 7890946 YP_002898264.1 CDS GBP346_A3590 NC_012695.1 3468091 3468513 R identified by match to protein family HMM PF03653; hypothetical protein complement(3468091..3468513) Burkholderia pseudomallei MSHR346 7887398 YP_002898265.1 CDS proA NC_012695.1 3468531 3469802 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3468531..3469802) Burkholderia pseudomallei MSHR346 7890229 YP_002898266.1 CDS holA NC_012695.1 3469939 3471027 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3469939..3471027) Burkholderia pseudomallei MSHR346 7888255 YP_002898267.1 CDS GBP346_A3594 NC_012695.1 3471073 3471624 R identified by match to protein family HMM PF04390; lipoprotein, RlpB family complement(3471073..3471624) Burkholderia pseudomallei MSHR346 7887126 YP_002898268.1 CDS leuS NC_012695.1 3471666 3474260 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3471666..3474260) Burkholderia pseudomallei MSHR346 7888805 YP_002898269.1 CDS GBP346_A3596 NC_012695.1 3474435 3474965 R identified by match to protein family HMM PF02472; transport energizing protein, ExbD/TolR family complement(3474435..3474965) Burkholderia pseudomallei MSHR346 7887886 YP_002898270.1 CDS GBP346_A3597 NC_012695.1 3475006 3475713 R identified by match to protein family HMM PF01618; transporter, MotA/TolQ/ExbB proton channel family complement(3475006..3475713) Burkholderia pseudomallei MSHR346 7888128 YP_002898271.1 CDS dapB NC_012695.1 3475742 3476548 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3475742..3476548) Burkholderia pseudomallei MSHR346 7886789 YP_002898272.1 CDS GBP346_A3599 NC_012695.1 3476619 3477380 R identified by match to protein family HMM PF04355; lipoprotein, SmpA/OmlA family complement(3476619..3477380) Burkholderia pseudomallei MSHR346 7889428 YP_002898273.1 CDS GBP346_A3600 NC_012695.1 3477564 3477992 D identified by match to protein family HMM PF01475; ferric uptake regulation protein 3477564..3477992 Burkholderia pseudomallei MSHR346 7888687 YP_002898274.1 CDS allA_2 NC_012695.1 3478129 3478653 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3478129..3478653) Burkholderia pseudomallei MSHR346 7888100 YP_002898275.1 CDS alc NC_012695.1 3478667 3479740 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3478667..3479740) Burkholderia pseudomallei MSHR346 7887141 YP_002898276.1 CDS GBP346_A3603 NC_012695.1 3479815 3481137 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(3479815..3481137) Burkholderia pseudomallei MSHR346 7889425 YP_002898277.1 CDS GBP346_A3604 NC_012695.1 3481383 3482075 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 3481383..3482075 Burkholderia pseudomallei MSHR346 7888524 YP_002898278.1 CDS GBP346_A3605 NC_012695.1 3482347 3482484 D FOG LysM repeat protein 3482347..3482484 Burkholderia pseudomallei MSHR346 7890752 YP_002898279.1 CDS GBP346_A3606 NC_012695.1 3482727 3483662 R controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR complement(3482727..3483662) Burkholderia pseudomallei MSHR346 7888070 YP_002898280.1 CDS GBP346_A3607 NC_012695.1 3483777 3484436 D identified by match to protein family HMM PF00484; carbonate dehydratase 3483777..3484436 Burkholderia pseudomallei MSHR346 7886922 YP_002898281.1 CDS cynS NC_012695.1 3484523 3484993 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 3484523..3484993 Burkholderia pseudomallei MSHR346 7888342 YP_002898282.1 CDS GBP346_A3609 NC_012695.1 3485175 3486374 D identified by match to protein family HMM PF07690; major facilitator family transporter 3485175..3486374 Burkholderia pseudomallei MSHR346 7887487 YP_002898283.1 CDS GBP346_A3610 NC_012695.1 3486404 3486688 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3486404..3486688 Burkholderia pseudomallei MSHR346 7888268 YP_002898284.1 CDS gap NC_012695.1 3486782 3487792 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I complement(3486782..3487792) Burkholderia pseudomallei MSHR346 7889499 YP_002898285.1 CDS tkt NC_012695.1 3487883 3489955 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3487883..3489955) Burkholderia pseudomallei MSHR346 7890781 YP_002898286.1 CDS GBP346_A3613 NC_012695.1 3490047 3490196 R hypothetical protein complement(3490047..3490196) Burkholderia pseudomallei MSHR346 7887842 YP_002898287.1 CDS speE NC_012695.1 3490173 3491030 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3490173..3491030 Burkholderia pseudomallei MSHR346 7889931 YP_002898288.1 CDS GBP346_A3615 NC_012695.1 3491070 3491486 D identified by match to protein family HMM PF00903; glyoxalase family protein 3491070..3491486 Burkholderia pseudomallei MSHR346 7890517 YP_002898289.1 CDS GBP346_A3616 NC_012695.1 3491483 3492250 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3491483..3492250 Burkholderia pseudomallei MSHR346 7889669 YP_002898290.1 CDS GBP346_A3617 NC_012695.1 3492415 3492579 R identified by glimmer; putative; hypothetical protein complement(3492415..3492579) Burkholderia pseudomallei MSHR346 7887794 YP_002898291.1 CDS GBP346_A3618 NC_012695.1 3492662 3493225 R identified by match to protein family HMM PF01337; barstar (barnase inhibitor) complement(3492662..3493225) Burkholderia pseudomallei MSHR346 7890262 YP_002898292.1 CDS GBP346_A3619 NC_012695.1 3493242 3493673 R identified by match to protein family HMM PF00545; ribonuclease SA complement(3493242..3493673) Burkholderia pseudomallei MSHR346 7886779 YP_002898293.1 CDS GBP346_A3620 NC_012695.1 3494002 3496311 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(3494002..3496311) Burkholderia pseudomallei MSHR346 7889445 YP_002898294.1 CDS thiL NC_012695.1 3496513 3497514 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3496513..3497514 Burkholderia pseudomallei MSHR346 7890563 YP_002898295.1 CDS GBP346_A3622 NC_012695.1 3497504 3498121 D identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 3497504..3498121 Burkholderia pseudomallei MSHR346 7887632 YP_002898296.1 CDS GBP346_A3623 NC_012695.1 3498165 3498665 D identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; CinA family protein 3498165..3498665 Burkholderia pseudomallei MSHR346 7889072 YP_002898297.1 CDS GBP346_A3624 NC_012695.1 3498760 3498876 R identified by glimmer; putative; hypothetical protein complement(3498760..3498876) Burkholderia pseudomallei MSHR346 7887265 YP_002898298.1 CDS pyrF NC_012695.1 3498973 3499800 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3498973..3499800) Burkholderia pseudomallei MSHR346 7887221 YP_002898299.1 CDS GBP346_A3626 NC_012695.1 3499897 3500970 R identified by match to protein family HMM PF01263; aldose 1-epimerase family protein complement(3499897..3500970) Burkholderia pseudomallei MSHR346 7890684 YP_002898300.1 CDS GBP346_A3627 NC_012695.1 3501017 3501823 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family complement(3501017..3501823) Burkholderia pseudomallei MSHR346 7889342 YP_002898301.1 CDS araH NC_012695.1 3501862 3502866 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease protein complement(3501862..3502866) Burkholderia pseudomallei MSHR346 7890219 YP_002898302.1 CDS araG NC_012695.1 3502981 3504492 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3502981..3504492) Burkholderia pseudomallei MSHR346 7887917 YP_002898303.1 CDS GBP346_A3630 NC_012695.1 3504581 3505576 R identified by match to protein family HMM PF00532; match to protein family HMM TIGR01409; L-arabinose-binding periplasmic protein (ABP) complement(3504581..3505576) Burkholderia pseudomallei MSHR346 7889712 YP_002898304.1 CDS GBP346_A3631 NC_012695.1 3505706 3506485 R identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase complement(3505706..3506485) Burkholderia pseudomallei MSHR346 7888140 YP_002898305.1 CDS GBP346_A3632 NC_012695.1 3506482 3507171 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3506482..3507171) Burkholderia pseudomallei MSHR346 7887224 YP_002898306.1 CDS GBP346_A3633 NC_012695.1 3507209 3508222 R identified by match to protein family HMM PF05035; 2-dehydro-3-deoxygalactonokinase complement(3507209..3508222) Burkholderia pseudomallei MSHR346 7888976 YP_002898307.1 CDS GBP346_A3634 NC_012695.1 3508219 3509193 R identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family complement(3508219..3509193) Burkholderia pseudomallei MSHR346 7890829 YP_002898308.1 CDS GBP346_A3635 NC_012695.1 3509401 3509802 R hypothetical protein complement(3509401..3509802) Burkholderia pseudomallei MSHR346 7887967 YP_002898309.1 CDS GBP346_A3637 NC_012695.1 3509801 3509920 D identified by glimmer; putative; hypothetical protein 3509801..3509920 Burkholderia pseudomallei MSHR346 7888872 YP_002898310.1 CDS GBP346_A3636 NC_012695.1 3509893 3511527 R identified by match to protein family HMM PF00450; serine carboxypeptidase family protein complement(3509893..3511527) Burkholderia pseudomallei MSHR346 7889961 YP_002898311.1 CDS GBP346_A3638 NC_012695.1 3511735 3511893 R identified by glimmer; putative; hypothetical protein complement(3511735..3511893) Burkholderia pseudomallei MSHR346 7887298 YP_002898312.1 CDS mtgA NC_012695.1 3511987 3512757 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3511987..3512757) Burkholderia pseudomallei MSHR346 7890021 YP_002898313.1 CDS aroE NC_012695.1 3512778 3513656 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3512778..3513656) Burkholderia pseudomallei MSHR346 7890599 YP_002898314.1 CDS GBP346_A3641 NC_012695.1 3513653 3515731 R identified by match to protein family HMM PF00773; hypothetical protein complement(3513653..3515731) Burkholderia pseudomallei MSHR346 7890120 YP_002898315.1 CDS GBP346_A3642 NC_012695.1 3515752 3515868 R identified by glimmer; putative; hypothetical protein complement(3515752..3515868) Burkholderia pseudomallei MSHR346 7890397 YP_002898316.1 CDS GBP346_A3643 NC_012695.1 3515855 3516424 R identified by match to protein family HMM PF05728; esterase complement(3515855..3516424) Burkholderia pseudomallei MSHR346 7888402 YP_002898317.1 CDS mpl NC_012695.1 3516421 3517935 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01081; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(3516421..3517935) Burkholderia pseudomallei MSHR346 7888168 YP_002898318.1 CDS GBP346_A3645 NC_012695.1 3518027 3518683 D hypothetical protein 3518027..3518683 Burkholderia pseudomallei MSHR346 7889880 YP_002898319.1 CDS GBP346_A3646 NC_012695.1 3518676 3519236 D identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin family protein 3518676..3519236 Burkholderia pseudomallei MSHR346 7889147 YP_002898320.1 CDS aroQ_1 NC_012695.1 3519297 3519884 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3519297..3519884 Burkholderia pseudomallei MSHR346 7888605 YP_002898321.1 CDS accB NC_012695.1 3519952 3520425 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3519952..3520425 Burkholderia pseudomallei MSHR346 7889080 YP_002898322.1 CDS accC_1 NC_012695.1 3520510 3521877 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3520510..3521877 Burkholderia pseudomallei MSHR346 7889626 YP_002898323.1 CDS prmA NC_012695.1 3521874 3522782 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3521874..3522782 Burkholderia pseudomallei MSHR346 7887210 YP_002898324.1 CDS GBP346_A3651 NC_012695.1 3522830 3524257 D identified by match to protein family HMM TIGR02098; zinc finger/thioredoxin domain protein 3522830..3524257 Burkholderia pseudomallei MSHR346 7890548 YP_002898325.1 CDS GBP346_A3652 NC_012695.1 3524325 3524828 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; Redoxin superfamily protein 3524325..3524828 Burkholderia pseudomallei MSHR346 7890384 YP_002898326.1 CDS GBP346_A3653 NC_012695.1 3524929 3525867 D identified by match to protein family HMM PF00294; kinase, PfkB family 3524929..3525867 Burkholderia pseudomallei MSHR346 7886947 YP_002898327.1 CDS GBP346_A3654 NC_012695.1 3525891 3526364 D identified by match to protein family HMM PF05433; outer membrane lipoprotein 3525891..3526364 Burkholderia pseudomallei MSHR346 7886858 YP_002898328.1 CDS GBP346_A3655 NC_012695.1 3526612 3527193 R histone protein complement(3526612..3527193) Burkholderia pseudomallei MSHR346 7888714 YP_002898329.1 CDS GBP346_A3656 NC_012695.1 3527215 3527334 D hypothetical protein 3527215..3527334 Burkholderia pseudomallei MSHR346 7889594 YP_002898330.1 CDS GBP346_A3657 NC_012695.1 3527628 3528839 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3527628..3528839) Burkholderia pseudomallei MSHR346 7889105 YP_002898331.1 CDS GBP346_A3658 NC_012695.1 3529207 3532194 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3529207..3532194) Burkholderia pseudomallei MSHR346 7889953 YP_002898332.1 CDS GBP346_A3659 NC_012695.1 3532219 3532500 D hypothetical protein 3532219..3532500 Burkholderia pseudomallei MSHR346 7887875 YP_002898333.1 CDS GBP346_A3660 NC_012695.1 3532665 3533255 R identified by match to protein family HMM PF01510; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3532665..3533255) Burkholderia pseudomallei MSHR346 7890192 YP_002898334.1 CDS GBP346_A3661 NC_012695.1 3533252 3533572 R hypothetical protein complement(3533252..3533572) Burkholderia pseudomallei MSHR346 7887368 YP_002898335.1 CDS GBP346_A3662 NC_012695.1 3533586 3534458 R identified by match to protein family HMM PF01578; cytochrome c assembly family protein complement(3533586..3534458) Burkholderia pseudomallei MSHR346 7890701 YP_002898336.1 CDS ffh NC_012695.1 3534573 3535940 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 3534573..3535940 Burkholderia pseudomallei MSHR346 7886865 YP_002898337.1 CDS GBP346_A3664 NC_012695.1 3536038 3536589 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3536038..3536589 Burkholderia pseudomallei MSHR346 7887406 YP_002898338.1 CDS GBP346_A3666 NC_012695.1 3536679 3536792 D identified by glimmer; putative; hypothetical protein 3536679..3536792 Burkholderia pseudomallei MSHR346 7888469 YP_002898339.1 CDS GBP346_A3665 NC_012695.1 3536780 3537382 R identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein complement(3536780..3537382) Burkholderia pseudomallei MSHR346 7888755 YP_002898340.1 CDS proS NC_012695.1 3537414 3539150 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3537414..3539150) Burkholderia pseudomallei MSHR346 7887064 YP_002898341.1 CDS GBP346_A3668 NC_012695.1 3539369 3540019 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3539369..3540019 Burkholderia pseudomallei MSHR346 7890882 YP_002898342.1 CDS GBP346_A3669 NC_012695.1 3540105 3540662 D identified by match to protein family HMM PF08750; putative lipoprotein 3540105..3540662 Burkholderia pseudomallei MSHR346 7889575 YP_002898343.1 CDS GBP346_A3670 NC_012695.1 3540686 3540859 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3540686..3540859) Burkholderia pseudomallei MSHR346 7887301 YP_002898344.1 CDS proB NC_012695.1 3540871 3541989 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3540871..3541989) Burkholderia pseudomallei MSHR346 7886714 YP_002898345.1 CDS obgE NC_012695.1 3542074 3543192 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3542074..3543192) Burkholderia pseudomallei MSHR346 7888094 YP_002898346.1 CDS GBP346_A3673 NC_012695.1 3543182 3543316 D hypothetical protein 3543182..3543316 Burkholderia pseudomallei MSHR346 7887203 YP_002898347.1 CDS rpmA NC_012695.1 3543377 3543640 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3543377..3543640) Burkholderia pseudomallei MSHR346 7888998 YP_002898348.1 CDS rplU NC_012695.1 3543669 3543980 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(3543669..3543980) Burkholderia pseudomallei MSHR346 7887658 YP_002898349.1 CDS ispB NC_012695.1 3544196 3545194 D identified by match to protein family HMM PF00348; octaprenyl-diphosphate synthase 3544196..3545194 Burkholderia pseudomallei MSHR346 7887852 YP_002898350.1 CDS GBP346_A3678 NC_012695.1 3545476 3546771 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS domain protein 3545476..3546771 Burkholderia pseudomallei MSHR346 7889200 YP_002898351.1 CDS GBP346_A3679 NC_012695.1 3546907 3548130 D identified by match to protein family HMM PF00437; type IV pilus assembly protein TapB 3546907..3548130 Burkholderia pseudomallei MSHR346 7889015 YP_002898352.1 CDS GBP346_A3680 NC_012695.1 3548127 3549344 D identified by match to protein family HMM PF00482; type IV pilus biogenesis protein PilC 3548127..3549344 Burkholderia pseudomallei MSHR346 7887656 YP_002898353.1 CDS pilD NC_012695.1 3549389 3550303 D identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV prepilin leader peptidase 3549389..3550303 Burkholderia pseudomallei MSHR346 7888291 YP_002898354.1 CDS coaE NC_012695.1 3550307 3550918 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3550307..3550918 Burkholderia pseudomallei MSHR346 7887596 YP_002898355.1 CDS GBP346_A3683 NC_012695.1 3551067 3551822 D identified by match to protein family HMM PF07072; hypothetical protein 3551067..3551822 Burkholderia pseudomallei MSHR346 7886982 YP_002898356.1 CDS GBP346_A3684 NC_012695.1 3551858 3552061 D identified by match to protein family HMM PF03884; hypothetical protein 3551858..3552061 Burkholderia pseudomallei MSHR346 7888981 YP_002898357.1 CDS GBP346_A3685 NC_012695.1 3552197 3552646 R identified by match to protein family HMM PF00293; mutator MutT protein complement(3552197..3552646) Burkholderia pseudomallei MSHR346 7890251 YP_002898358.1 CDS GBP346_A3686 NC_012695.1 3552643 3553512 R identified by match to protein family HMM PF05673; AAA ATPase superfamily complement(3552643..3553512) Burkholderia pseudomallei MSHR346 7887461 YP_002898359.1 CDS argJ NC_012695.1 3553533 3554924 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(3553533..3554924) Burkholderia pseudomallei MSHR346 7890358 YP_002898360.1 CDS secA NC_012695.1 3554926 3557721 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3554926..3557721) Burkholderia pseudomallei MSHR346 7889760 YP_002898361.1 CDS GBP346_A3689 NC_012695.1 3558120 3558455 D hypothetical protein 3558120..3558455 Burkholderia pseudomallei MSHR346 7887923 YP_002898362.1 CDS GBP346_A3690 NC_012695.1 3558421 3558900 D hypothetical protein 3558421..3558900 Burkholderia pseudomallei MSHR346 7887030 YP_002898363.1 CDS lpxC NC_012695.1 3559291 3560208 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3559291..3560208) Burkholderia pseudomallei MSHR346 7887914 YP_002898364.1 CDS GBP346_A3692 NC_012695.1 3560450 3561094 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family protein complement(3560450..3561094) Burkholderia pseudomallei MSHR346 7890919 YP_002898365.1 CDS ftsZ NC_012695.1 3561142 3562338 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3561142..3562338) Burkholderia pseudomallei MSHR346 7889232 YP_002898366.1 CDS ftsA NC_012695.1 3562447 3563679 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(3562447..3563679) Burkholderia pseudomallei MSHR346 7887466 YP_002898367.1 CDS GBP346_A3695 NC_012695.1 3563706 3564458 R identified by match to protein family HMM PF03799; match to protein family HMM PF08478; cell division protein FtsQ complement(3563706..3564458) Burkholderia pseudomallei MSHR346 7889867 YP_002898368.1 CDS ddl NC_012695.1 3564479 3565417 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3564479..3565417) Burkholderia pseudomallei MSHR346 7889303 YP_002898369.1 CDS murC NC_012695.1 3565419 3566816 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3565419..3566816) Burkholderia pseudomallei MSHR346 7887866 YP_002898370.1 CDS murG NC_012695.1 3566813 3567916 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3566813..3567916) Burkholderia pseudomallei MSHR346 7889536 YP_002898371.1 CDS ftsW NC_012695.1 3568038 3569330 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW complement(3568038..3569330) Burkholderia pseudomallei MSHR346 7888478 YP_002898372.1 CDS murD NC_012695.1 3569327 3570853 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3569327..3570853) Burkholderia pseudomallei MSHR346 7887238 YP_002898373.1 CDS mraY NC_012695.1 3570867 3572036 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3570867..3572036) Burkholderia pseudomallei MSHR346 7888764 YP_002898374.1 CDS GBP346_A3702 NC_012695.1 3572051 3573457 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(3572051..3573457) Burkholderia pseudomallei MSHR346 7886979 YP_002898375.1 CDS murE NC_012695.1 3573454 3574998 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3573454..3574998) Burkholderia pseudomallei MSHR346 7887744 YP_002898376.1 CDS GBP346_A3704 NC_012695.1 3574995 3576839 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(3574995..3576839) Burkholderia pseudomallei MSHR346 7890040 YP_002898377.1 CDS ftsL NC_012695.1 3576836 3577165 R identified by match to protein family HMM PF04999; match to protein family HMM TIGR02209; cell division protein FtsL complement(3576836..3577165) Burkholderia pseudomallei MSHR346 7889550 YP_002898378.1 CDS mraW NC_012695.1 3577162 3578103 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(3577162..3578103) Burkholderia pseudomallei MSHR346 7889946 YP_002898379.1 CDS mraZ NC_012695.1 3578127 3578555 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3578127..3578555) Burkholderia pseudomallei MSHR346 7887584 YP_002898380.1 CDS GBP346_A3708 NC_012695.1 3578943 3579569 R putative ubiquinone biosynthesis protein homolog complement(3578943..3579569) Burkholderia pseudomallei MSHR346 7889478 YP_002898381.1 CDS GBP346_A3709 NC_012695.1 3579850 3581010 D identified by match to protein family HMM PF00267; putative outer membrane porin 3579850..3581010 Burkholderia pseudomallei MSHR346 7887480 YP_002898382.1 CDS GBP346_A3710 NC_012695.1 3581246 3582919 R activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase complement(3581246..3582919) Burkholderia pseudomallei MSHR346 7888316 YP_002898383.1 CDS GBP346_A3711 NC_012695.1 3583059 3585134 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase complement(3583059..3585134) Burkholderia pseudomallei MSHR346 7886698 YP_002898384.1 CDS GBP346_A3712 NC_012695.1 3585093 3585221 D identified by glimmer; putative; hypothetical protein 3585093..3585221 Burkholderia pseudomallei MSHR346 7887266 YP_002898385.1 CDS GBP346_A3717 NC_012695.1 3590945 3591061 R hypothetical protein complement(3590945..3591061) Burkholderia pseudomallei MSHR346 7887083 YP_002898386.1 CDS GBP346_A3719 NC_012695.1 3591358 3591471 D hypothetical protein 3591358..3591471 Burkholderia pseudomallei MSHR346 7888649 YP_002898387.1 CDS GBP346_A3718 NC_012695.1 3591458 3592252 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3591458..3592252) Burkholderia pseudomallei MSHR346 7886993 YP_002898388.1 CDS paaN NC_012695.1 3592365 3594071 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR02288; phenylacetic acid degradation protein PaaN 3592365..3594071 Burkholderia pseudomallei MSHR346 7886901 YP_002898389.1 CDS pcaF_1 NC_012695.1 3594145 3595362 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3594145..3595362 Burkholderia pseudomallei MSHR346 7887300 YP_002898390.1 CDS paaB NC_012695.1 3595458 3596249 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3595458..3596249 Burkholderia pseudomallei MSHR346 7889994 YP_002898391.1 CDS paaD NC_012695.1 3596335 3596727 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; match to protein family HMM TIGR02286; phenylacetic acid degradation protein PaaD 3596335..3596727 Burkholderia pseudomallei MSHR346 7888957 YP_002898392.1 CDS paaF NC_012695.1 3596765 3598063 D identified by match to protein family HMM TIGR02155; phenylacetate-CoA ligase 3596765..3598063 Burkholderia pseudomallei MSHR346 7887474 YP_002898393.1 CDS mltA NC_012695.1 3598391 3599668 R identified by match to protein family HMM PF03562; match to protein family HMM PF06725; membrane-bound lytic murein transglycosylase A complement(3598391..3599668) Burkholderia pseudomallei MSHR346 7887707 YP_002898394.1 CDS apaG NC_012695.1 3599726 3600310 R protein associated with Co2+ and Mg2+ efflux; ApaG complement(3599726..3600310) Burkholderia pseudomallei MSHR346 7887085 YP_002898395.1 CDS rpe NC_012695.1 3600282 3600968 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3600282..3600968 Burkholderia pseudomallei MSHR346 7889274 YP_002898396.1 CDS gph_2 NC_012695.1 3600965 3601702 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 3600965..3601702 Burkholderia pseudomallei MSHR346 7887130 YP_002898397.1 CDS trpE NC_012695.1 3601990 3603558 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3601990..3603558 Burkholderia pseudomallei MSHR346 7889416 YP_002898398.1 CDS GBP346_A3731 NC_012695.1 3603572 3604162 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3603572..3604162 Burkholderia pseudomallei MSHR346 7889444 YP_002898399.1 CDS trpD NC_012695.1 3604180 3605211 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3604180..3605211 Burkholderia pseudomallei MSHR346 7889354 YP_002898400.1 CDS trpC NC_012695.1 3605274 3606059 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3605274..3606059 Burkholderia pseudomallei MSHR346 7889017 YP_002898401.1 CDS GBP346_A3734 NC_012695.1 3606070 3606711 D identified by match to protein family HMM PF01928; adenylate cyclase 3606070..3606711 Burkholderia pseudomallei MSHR346 7888014 YP_002898402.1 CDS ung NC_012695.1 3606753 3607541 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3606753..3607541 Burkholderia pseudomallei MSHR346 7888069 YP_002898403.1 CDS GBP346_A3736 NC_012695.1 3607742 3608455 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; fmn-dependent NADH-azoreductase (fmn-dependent nadh-azocompound oxidoreductase) (azo-dye reductase) complement(3607742..3608455) Burkholderia pseudomallei MSHR346 7887099 YP_002898404.1 CDS GBP346_A3737 NC_012695.1 3608477 3610306 R identified by match to protein family HMM PF05299; family M61 unassigned peptidase complement(3608477..3610306) Burkholderia pseudomallei MSHR346 7889392 YP_002898405.1 CDS GBP346_A3738 NC_012695.1 3610406 3611134 R probable thiol:disulfide interchange protein DsbC complement(3610406..3611134) Burkholderia pseudomallei MSHR346 7889348 YP_002898406.1 CDS GBP346_A3739 NC_012695.1 3611236 3612417 R identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; ubiquinone biosynthesis hydroxylase family protein complement(3611236..3612417) Burkholderia pseudomallei MSHR346 7889349 YP_002898407.1 CDS GBP346_A3740 NC_012695.1 3612464 3612640 R hypothetical protein complement(3612464..3612640) Burkholderia pseudomallei MSHR346 7889470 YP_002898408.1 CDS GBP346_A3741 NC_012695.1 3612732 3612860 D putative lipoprotein 3612732..3612860 Burkholderia pseudomallei MSHR346 7887857 YP_002898409.1 CDS GBP346_A3742 NC_012695.1 3613365 3613691 D hypothetical protein 3613365..3613691 Burkholderia pseudomallei MSHR346 7887286 YP_002898410.1 CDS GBP346_A3743 NC_012695.1 3613796 3613909 D hypothetical protein 3613796..3613909 Burkholderia pseudomallei MSHR346 7888870 YP_002898411.1 CDS GBP346_A3744 NC_012695.1 3614041 3614169 D hypothetical protein 3614041..3614169 Burkholderia pseudomallei MSHR346 7890668 YP_002898412.1 CDS ychF NC_012695.1 3614193 3615287 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3614193..3615287 Burkholderia pseudomallei MSHR346 7888745 YP_002898413.1 CDS GBP346_A3746 NC_012695.1 3615398 3615679 R hypothetical protein complement(3615398..3615679) Burkholderia pseudomallei MSHR346 7890640 YP_002898414.1 CDS GBP346_A3747 NC_012695.1 3615899 3616402 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3615899..3616402 Burkholderia pseudomallei MSHR346 7887052 YP_002898415.1 CDS GBP346_A3748 NC_012695.1 3616416 3617249 D hypothetical protein 3616416..3617249 Burkholderia pseudomallei MSHR346 7887757 YP_002898416.1 CDS gabP NC_012695.1 3617321 3619084 R identified by match to protein family HMM PF00324; match to protein family HMM TIGR01773; gaba permease complement(3617321..3619084) Burkholderia pseudomallei MSHR346 7890867 YP_002898417.1 CDS GBP346_A3750 NC_012695.1 3619229 3619396 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3619229..3619396) Burkholderia pseudomallei MSHR346 7887305 YP_002898418.1 CDS GBP346_A3751 NC_012695.1 3619389 3619802 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3619389..3619802) Burkholderia pseudomallei MSHR346 7888890 YP_002898419.1 CDS GBP346_A3752 NC_012695.1 3619818 3619931 D hypothetical protein 3619818..3619931 Burkholderia pseudomallei MSHR346 7890197 YP_002898420.1 CDS GBP346_A3753 NC_012695.1 3619984 3620961 R identified by match to protein family HMM PF03009; match to protein family HMM TIGR01409; glycerophosphoryl diester phosphodiesterase family protein complement(3619984..3620961) Burkholderia pseudomallei MSHR346 7887356 YP_002898421.1 CDS GBP346_A3754 NC_012695.1 3621101 3621412 D hypothetical protein 3621101..3621412 Burkholderia pseudomallei MSHR346 7887742 YP_002898422.1 CDS GBP346_A3755 NC_012695.1 3621699 3623366 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3621699..3623366 Burkholderia pseudomallei MSHR346 7890055 YP_002898423.1 CDS GBP346_A3756 NC_012695.1 3623697 3624320 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA complement(3623697..3624320) Burkholderia pseudomallei MSHR346 7889593 YP_002898424.1 CDS GBP346_A3757 NC_012695.1 3624317 3624868 R identified by match to protein family HMM PF00857; isochorismatase family protein complement(3624317..3624868) Burkholderia pseudomallei MSHR346 7887039 YP_002898425.1 CDS GBP346_A3758 NC_012695.1 3624892 3625035 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3624892..3625035) Burkholderia pseudomallei MSHR346 7889908 YP_002898426.1 CDS GBP346_A3759 NC_012695.1 3625005 3626819 R identified by match to protein family HMM PF00557; match to protein family HMM PF01321; metallopeptidase, M24 family complement(3625005..3626819) Burkholderia pseudomallei MSHR346 7888280 YP_002898427.1 CDS GBP346_A3760 NC_012695.1 3626838 3627092 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(3626838..3627092) Burkholderia pseudomallei MSHR346 7889881 YP_002898428.1 CDS GBP346_A3761 NC_012695.1 3627089 3627442 R hypothetical protein complement(3627089..3627442) Burkholderia pseudomallei MSHR346 7888317 YP_002898429.1 CDS GBP346_A3762 NC_012695.1 3627441 3627674 D hypothetical protein 3627441..3627674 Burkholderia pseudomallei MSHR346 7889475 YP_002898430.1 CDS hemA NC_012695.1 3627686 3628990 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3627686..3628990 Burkholderia pseudomallei MSHR346 7888780 YP_002898431.1 CDS prfA NC_012695.1 3629057 3630139 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3629057..3630139 Burkholderia pseudomallei MSHR346 7889813 YP_002898432.1 CDS hemK NC_012695.1 3630183 3631040 D identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534; protein-(glutamine-N5) methyltransferase, release factor-specific 3630183..3631040 Burkholderia pseudomallei MSHR346 7888250 YP_002898433.1 CDS GBP346_A3766 NC_012695.1 3631120 3631428 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; putative glutaredoxin family protein 3631120..3631428 Burkholderia pseudomallei MSHR346 7890717 YP_002898434.1 CDS GBP346_A3767 NC_012695.1 3631443 3632039 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3631443..3632039 Burkholderia pseudomallei MSHR346 7886953 YP_002898435.1 CDS GBP346_A3768 NC_012695.1 3632323 3633111 D identified by match to protein family HMM PF02900; 4,5-dopa dioxygenase extradiol 3632323..3633111 Burkholderia pseudomallei MSHR346 7890242 YP_002898436.1 CDS GBP346_A3769 NC_012695.1 3633600 3635201 R identified by match to protein family HMM PF00324; amino acid permease complement(3633600..3635201) Burkholderia pseudomallei MSHR346 7888865 YP_002898437.1 CDS GBP346_A3770 NC_012695.1 3635184 3635333 D hypothetical protein 3635184..3635333 Burkholderia pseudomallei MSHR346 7888595 YP_002898438.1 CDS GBP346_A3771 NC_012695.1 3635635 3635838 D identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein 3635635..3635838 Burkholderia pseudomallei MSHR346 7887905 YP_002898439.1 CDS GBP346_A3772 NC_012695.1 3636025 3637287 R putative chaperone protein homolog complement(3636025..3637287) Burkholderia pseudomallei MSHR346 7887036 YP_002898440.1 CDS GBP346_A3773 NC_012695.1 3637933 3638538 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(3637933..3638538) Burkholderia pseudomallei MSHR346 7890097 YP_002898441.1 CDS GBP346_A3775 NC_012695.1 3638500 3639075 D hypothetical protein 3638500..3639075 Burkholderia pseudomallei MSHR346 7890081 YP_002898442.1 CDS GBP346_A3774 NC_012695.1 3639035 3640318 R identified by match to protein family HMM PF07690; transporter, major facilitator family complement(3639035..3640318) Burkholderia pseudomallei MSHR346 7886850 YP_002898443.1 CDS GBP346_A3776 NC_012695.1 3640477 3641121 D identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 3640477..3641121 Burkholderia pseudomallei MSHR346 7890525 YP_002898444.1 CDS GBP346_A3777 NC_012695.1 3641459 3642082 D identified by match to protein family HMM PF07209; hypothetical protein 3641459..3642082 Burkholderia pseudomallei MSHR346 7889253 YP_002898445.1 CDS GBP346_A3778 NC_012695.1 3642167 3643063 R hypothetical protein complement(3642167..3643063) Burkholderia pseudomallei MSHR346 7888289 YP_002898446.1 CDS GBP346_A3779 NC_012695.1 3643191 3644327 R identified by match to protein family HMM PF05175; putative methyltransferase complement(3643191..3644327) Burkholderia pseudomallei MSHR346 7890610 YP_002898447.1 CDS GBP346_A3780 NC_012695.1 3644304 3644609 D LigA 3644304..3644609 Burkholderia pseudomallei MSHR346 7888307 YP_002898448.1 CDS GBP346_A3781 NC_012695.1 3644684 3645802 R identified by match to protein family HMM PF01757; acyltransferase family protein complement(3644684..3645802) Burkholderia pseudomallei MSHR346 7890750 YP_002898449.1 CDS GBP346_A3783 NC_012695.1 3645801 3646280 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3645801..3646280 Burkholderia pseudomallei MSHR346 7889289 YP_002898450.1 CDS GBP346_A3782 NC_012695.1 3646240 3646743 R putative lipoprotein complement(3646240..3646743) Burkholderia pseudomallei MSHR346 7887882 YP_002898451.1 CDS GBP346_A3784 NC_012695.1 3646937 3647050 D hypothetical protein 3646937..3647050 Burkholderia pseudomallei MSHR346 7889563 YP_002898452.1 CDS GBP346_A3786 NC_012695.1 3647347 3649512 D identified by match to protein family HMM PF01433; peptidase, M1 family 3647347..3649512 Burkholderia pseudomallei MSHR346 7887931 YP_002898453.1 CDS GBP346_A3785 NC_012695.1 3649470 3649730 R identified by glimmer; putative; hypothetical protein complement(3649470..3649730) Burkholderia pseudomallei MSHR346 7890180 YP_002898454.1 CDS GBP346_A3787 NC_012695.1 3650137 3650298 R hypothetical protein complement(3650137..3650298) Burkholderia pseudomallei MSHR346 7888426 YP_002898455.1 CDS GBP346_A3788 NC_012695.1 3650267 3650476 D identified by glimmer; putative; hypothetical protein 3650267..3650476 Burkholderia pseudomallei MSHR346 7887228 YP_002898456.1 CDS GBP346_A3789 NC_012695.1 3650535 3650804 D hypothetical protein 3650535..3650804 Burkholderia pseudomallei MSHR346 7889055 YP_002898457.1 CDS GBP346_A3790 NC_012695.1 3650907 3651137 D hypothetical protein 3650907..3651137 Burkholderia pseudomallei MSHR346 7887589 YP_002898458.1 CDS GBP346_A3791 NC_012695.1 3651371 3651727 R hypothetical protein complement(3651371..3651727) Burkholderia pseudomallei MSHR346 7889661 YP_002898459.1 CDS GBP346_A3792 NC_012695.1 3651753 3653021 D identified by match to protein family HMM PF00529; auxiliary transport protein, membrane fusion protein family 3651753..3653021 Burkholderia pseudomallei MSHR346 7888326 YP_002898460.1 CDS GBP346_A3793 NC_012695.1 3653036 3655297 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; putative toxin secretion ABC transporter, ATP-binding protein 3653036..3655297 Burkholderia pseudomallei MSHR346 7886810 YP_002898461.1 CDS GBP346_A3794 NC_012695.1 3655294 3656742 D identified by match to protein family HMM PF02321; type I secretion outer membrane protein, TolC family 3655294..3656742 Burkholderia pseudomallei MSHR346 7888489 YP_002898462.1 CDS GBP346_A3795 NC_012695.1 3656727 3656876 D hypothetical protein 3656727..3656876 Burkholderia pseudomallei MSHR346 7887520 YP_002898463.1 CDS GBP346_A3796 NC_012695.1 3656952 3657920 R hypothetical protein complement(3656952..3657920) Burkholderia pseudomallei MSHR346 7890006 YP_002898464.1 CDS GBP346_A3797 NC_012695.1 3657932 3658897 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase family protein 3657932..3658897 Burkholderia pseudomallei MSHR346 7888659 YP_002898465.1 CDS GBP346_A3798 NC_012695.1 3658926 3659063 D hypothetical protein 3658926..3659063 Burkholderia pseudomallei MSHR346 7888391 YP_002898466.1 CDS GBP346_A3799 NC_012695.1 3659048 3659161 D hypothetical protein 3659048..3659161 Burkholderia pseudomallei MSHR346 7889259 YP_002898467.1 CDS icmF_1 NC_012695.1 3659169 3663062 D identified by match to protein family HMM PF06744; match to protein family HMM PF06761; match to protein family HMM TIGR03348; type VI secretion protein IcmF 3659169..3663062 Burkholderia pseudomallei MSHR346 7887873 YP_002898468.1 CDS GBP346_A3801 NC_012695.1 3663059 3664048 D identified by match to protein family HMM TIGR03373; type VI secretion-associated protein, family 3663059..3664048 Burkholderia pseudomallei MSHR346 7887932 YP_002898469.1 CDS GBP346_A3802 NC_012695.1 3664053 3664985 D identified by match to protein family HMM PF00691; OmpA family protein 3664053..3664985 Burkholderia pseudomallei MSHR346 7889651 YP_002898470.1 CDS GBP346_A3803 NC_012695.1 3665184 3666305 R identified by match to protein family HMM PF06812; match to protein family HMM TIGR03363; type VI secretion-associated protein, ImpA family complement(3665184..3666305) Burkholderia pseudomallei MSHR346 7888961 YP_002898471.1 CDS clpV_1 NC_012695.1 3666395 3669064 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345; type VI secretion ATPase, ClpV1 family complement(3666395..3669064) Burkholderia pseudomallei MSHR346 7888719 YP_002898472.1 CDS GBP346_A3805 NC_012695.1 3669098 3670198 R identified by match to protein family HMM PF06996; match to protein family HMM TIGR03347; type VI secretion protein, VC_A0110 family complement(3669098..3670198) Burkholderia pseudomallei MSHR346 7887212 YP_002898473.1 CDS vasA_3 NC_012695.1 3670162 3672000 R identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family complement(3670162..3672000) Burkholderia pseudomallei MSHR346 7888278 YP_002898474.1 CDS GBP346_A3807 NC_012695.1 3672079 3672561 R identified by match to protein family HMM PF04965; match to protein family HMM TIGR03357; type VI secretion system lysozyme-related protein complement(3672079..3672561) Burkholderia pseudomallei MSHR346 7889747 YP_002898475.1 CDS GBP346_A3808 NC_012695.1 3672619 3673122 R identified by match to protein family HMM PF05638; match to protein family HMM TIGR03344; type VI secretion system effector, Hcp1 family complement(3672619..3673122) Burkholderia pseudomallei MSHR346 7888606 YP_002898476.1 CDS GBP346_A3809 NC_012695.1 3673195 3674685 R identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355; type VI secretion protein, EvpB/family complement(3673195..3674685) Burkholderia pseudomallei MSHR346 7890104 YP_002898477.1 CDS GBP346_A3810 NC_012695.1 3674702 3675220 R identified by match to protein family HMM PF05591; match to protein family HMM TIGR03358; type VI secretion protein, VC_A0110 family complement(3674702..3675220) Burkholderia pseudomallei MSHR346 7886977 YP_002898478.1 CDS GBP346_A3811 NC_012695.1 3675257 3675892 R identified by match to protein family HMM PF07719; tetratricopeptide repeat protein complement(3675257..3675892) Burkholderia pseudomallei MSHR346 7886830 YP_002898479.1 CDS GBP346_A3812 NC_012695.1 3675986 3676315 R identified by glimmer; putative; hypothetical protein complement(3675986..3676315) Burkholderia pseudomallei MSHR346 7888833 YP_002898480.1 CDS GBP346_A3813 NC_012695.1 3676316 3676918 D identified by match to protein family HMM TIGR03352; type VI secretion lipoprotein, family 3676316..3676918 Burkholderia pseudomallei MSHR346 7887243 YP_002898481.1 CDS GBP346_A3814 NC_012695.1 3676967 3678373 D identified by match to protein family HMM PF05936; match to protein family HMM TIGR03353; type VI secretion protein, VC_A0110 family 3676967..3678373 Burkholderia pseudomallei MSHR346 7887345 YP_002898482.1 CDS GBP346_A3815 NC_012695.1 3678370 3679155 D identified by match to protein family HMM TIGR03349; type IV / VI secretion system protein, DotU family 3678370..3679155 Burkholderia pseudomallei MSHR346 7890459 YP_002898483.1 CDS GBP346_A3816 NC_012695.1 3679257 3679622 D phage tail completion protein 3679257..3679622 Burkholderia pseudomallei MSHR346 7888457 YP_002898484.1 CDS GBP346_A3817 NC_012695.1 3680712 3681128 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; DNA (cytosine-5-)-methyltransferase complement(3680712..3681128) Burkholderia pseudomallei MSHR346 7887240 YP_002898485.1 CDS GBP346_A3818 NC_012695.1 3681213 3681626 R identified by match to protein family HMM PF09684; match to protein family HMM TIGR01634; phage tail protein I complement(3681213..3681626) Burkholderia pseudomallei MSHR346 7890354 YP_002898486.1 CDS GBP346_A3819 NC_012695.1 3681619 3681945 R gp37, bacteriophage baseplate assembly protein J complement(3681619..3681945) Burkholderia pseudomallei MSHR346 7890069 YP_002898487.1 CDS GBP346_A3820 NC_012695.1 3682549 3682722 D identified by glimmer; putative; hypothetical protein 3682549..3682722 Burkholderia pseudomallei MSHR346 7889990 YP_002898488.1 CDS GBP346_A3821 NC_012695.1 3682719 3682838 D identified by glimmer; putative; hypothetical protein 3682719..3682838 Burkholderia pseudomallei MSHR346 7889625 YP_002898489.1 CDS GBP346_A3822 NC_012695.1 3683781 3683918 D identified by glimmer; putative; hypothetical protein 3683781..3683918 Burkholderia pseudomallei MSHR346 7889226 YP_002898490.1 CDS GBP346_A3823 NC_012695.1 3685078 3685212 R identified by glimmer; putative; hypothetical protein complement(3685078..3685212) Burkholderia pseudomallei MSHR346 7886951 YP_002898491.1 CDS GBP346_A3824 NC_012695.1 3685243 3685557 D identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683; probable addiction module killer protein 3685243..3685557 Burkholderia pseudomallei MSHR346 7889341 YP_002898492.1 CDS GBP346_A3825 NC_012695.1 3685554 3685916 D identified by match to protein family HMM TIGR02684; probable addiction module antidote protein 3685554..3685916 Burkholderia pseudomallei MSHR346 7887147 YP_002898493.1 CDS GBP346_A3826 NC_012695.1 3685960 3687015 R identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540; phage portal protein, pbsx family complement(3685960..3687015) Burkholderia pseudomallei MSHR346 7888767 YP_002898494.1 CDS GBP346_A3827 NC_012695.1 3687012 3687509 R terminase, large subunit complement(3687012..3687509) Burkholderia pseudomallei MSHR346 7889678 YP_002898495.1 CDS GBP346_A3828 NC_012695.1 3687319 3687558 D phage integrase family protein 3687319..3687558 Burkholderia pseudomallei MSHR346 7888230 YP_002898496.1 CDS sspB NC_012695.1 3687731 3688240 R identified by match to protein family HMM PF04386; ClpXP protease specificity-enhancing factor complement(3687731..3688240) Burkholderia pseudomallei MSHR346 7889207 YP_002898497.1 CDS GBP346_A3831 NC_012695.1 3688310 3688921 R identified by match to protein family HMM PF02798; stringent starvation protein A complement(3688310..3688921) Burkholderia pseudomallei MSHR346 7890842 YP_002898498.1 CDS GBP346_A3832 NC_012695.1 3689014 3689772 R identified by match to protein family HMM PF02167; ubiquinol-cytochrome c reductase, cytochrome c1 complement(3689014..3689772) Burkholderia pseudomallei MSHR346 7889429 YP_002898499.1 CDS petB NC_012695.1 3689795 3691177 R identified by match to protein family HMM PF00033; ubiquinol--Cytochrome c reductase, cytochrome b subunit complement(3689795..3691177) Burkholderia pseudomallei MSHR346 7890595 YP_002898500.1 CDS petA NC_012695.1 3691178 3691798 R identified by match to protein family HMM PF00355; match to protein family HMM TIGR01416; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(3691178..3691798) Burkholderia pseudomallei MSHR346 7889278 YP_002898501.1 CDS GBP346_A3835 NC_012695.1 3692019 3692882 R hypothetical protein complement(3692019..3692882) Burkholderia pseudomallei MSHR346 7889718 YP_002898502.1 CDS GBP346_A3836 NC_012695.1 3692787 3693995 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease DegQ 3692787..3693995 Burkholderia pseudomallei MSHR346 7890337 YP_002898503.1 CDS GBP346_A3837 NC_012695.1 3694097 3694219 D identified by glimmer; putative; hypothetical protein 3694097..3694219 Burkholderia pseudomallei MSHR346 7888445 YP_002898504.1 CDS tatC NC_012695.1 3694339 3695121 R identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; twin arginine-targeting protein translocase TatC complement(3694339..3695121) Burkholderia pseudomallei MSHR346 7887579 YP_002898505.1 CDS tatB NC_012695.1 3695160 3695687 R identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410; sec-independent translocase complement(3695160..3695687) Burkholderia pseudomallei MSHR346 7888744 YP_002898506.1 CDS tatA NC_012695.1 3695714 3695947 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3695714..3695947) Burkholderia pseudomallei MSHR346 7887889 YP_002898507.1 CDS GBP346_A3841 NC_012695.1 3696036 3696401 R identified by match to protein family HMM PF01230; HIT family protein complement(3696036..3696401) Burkholderia pseudomallei MSHR346 7888903 YP_002898508.1 CDS GBP346_A3842 NC_012695.1 3696430 3696819 R membrane protein complement(3696430..3696819) Burkholderia pseudomallei MSHR346 7888636 YP_002898509.1 CDS hisE NC_012695.1 3696872 3697240 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3696872..3697240) Burkholderia pseudomallei MSHR346 7888751 YP_002898510.1 CDS hisI NC_012695.1 3697237 3697650 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3697237..3697650) Burkholderia pseudomallei MSHR346 7887682 YP_002898511.1 CDS hisF NC_012695.1 3697650 3698438 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3697650..3698438) Burkholderia pseudomallei MSHR346 7889294 YP_002898512.1 CDS hisA NC_012695.1 3698506 3699261 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3698506..3699261) Burkholderia pseudomallei MSHR346 7890722 YP_002898513.1 CDS hisH NC_012695.1 3699429 3700070 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3699429..3700070) Burkholderia pseudomallei MSHR346 7889719 YP_002898514.1 CDS GBP346_A3848 NC_012695.1 3700067 3700687 R identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein complement(3700067..3700687) Burkholderia pseudomallei MSHR346 7890367 YP_002898515.1 CDS hisB NC_012695.1 3700743 3701330 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3700743..3701330) Burkholderia pseudomallei MSHR346 7887046 YP_002898516.1 CDS hisC_2 NC_012695.1 3701394 3702464 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3701394..3702464) Burkholderia pseudomallei MSHR346 7887884 YP_002898517.1 CDS hisD NC_012695.1 3702620 3703957 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3702620..3703957) Burkholderia pseudomallei MSHR346 7890077 YP_002898518.1 CDS hisG NC_012695.1 3703999 3704655 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(3703999..3704655) Burkholderia pseudomallei MSHR346 7888943 YP_002898519.1 CDS murA NC_012695.1 3704652 3706001 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3704652..3706001) Burkholderia pseudomallei MSHR346 7890000 YP_002898520.1 CDS GBP346_A3854 NC_012695.1 3706015 3706254 R identified by match to protein family HMM PF01722; hypothetical protein complement(3706015..3706254) Burkholderia pseudomallei MSHR346 7890228 YP_002898521.1 CDS GBP346_A3855 NC_012695.1 3706340 3707095 R identified by match to protein family HMM PF01061; ABC-2 type transporter complement(3706340..3707095) Burkholderia pseudomallei MSHR346 7889503 YP_002898522.1 CDS GBP346_A3856 NC_012695.1 3707092 3708018 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(3707092..3708018) Burkholderia pseudomallei MSHR346 7889046 YP_002898523.1 CDS GBP346_A3857 NC_012695.1 3708314 3708583 R hypothetical protein complement(3708314..3708583) Burkholderia pseudomallei MSHR346 7889802 YP_002898524.1 CDS GBP346_A3858 NC_012695.1 3708580 3709212 R identified by match to protein family HMM PF05494; toluene tolerance protein complement(3708580..3709212) Burkholderia pseudomallei MSHR346 7890333 YP_002898525.1 CDS GBP346_A3859 NC_012695.1 3709327 3710337 R identified by match to protein family HMM PF04333; lipoprotein, VacJ family complement(3709327..3710337) Burkholderia pseudomallei MSHR346 7888083 YP_002898526.1 CDS GBP346_A3860 NC_012695.1 3710334 3710885 R identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein complement(3710334..3710885) Burkholderia pseudomallei MSHR346 7890736 YP_002898527.1 CDS GBP346_A3861 NC_012695.1 3710898 3711665 R identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; ABC transporter, permease protein complement(3710898..3711665) Burkholderia pseudomallei MSHR346 7887073 YP_002898528.1 CDS GBP346_A3862 NC_012695.1 3711662 3712480 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(3711662..3712480) Burkholderia pseudomallei MSHR346 7890402 YP_002898529.1 CDS GBP346_A3863 NC_012695.1 3712580 3713683 R identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase complement(3712580..3713683) Burkholderia pseudomallei MSHR346 7887426 YP_002898530.1 CDS thiG NC_012695.1 3713680 3714495 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(3713680..3714495) Burkholderia pseudomallei MSHR346 7888746 YP_002898531.1 CDS thiS NC_012695.1 3714548 3714745 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(3714548..3714745) Burkholderia pseudomallei MSHR346 7890720 YP_002898532.1 CDS GBP346_A3866 NC_012695.1 3714794 3715927 R identified by match to protein family HMM PF01266; glycine oxidase ThiO complement(3714794..3715927) Burkholderia pseudomallei MSHR346 7888488 YP_002898533.1 CDS GBP346_A3867 NC_012695.1 3715924 3716055 R hypothetical protein complement(3715924..3716055) Burkholderia pseudomallei MSHR346 7887209 YP_002898534.1 CDS GBP346_A3869 NC_012695.1 3716114 3716533 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; ABC transporter, ATP-binding protein 3716114..3716533 Burkholderia pseudomallei MSHR346 7889287 YP_002898535.1 CDS GBP346_A3870 NC_012695.1 3716476 3718296 D identified by match to protein family HMM PF00005; match to protein family HMM PF05992; match to protein family HMM PF06472; ABC transporter, permease/ATP-binding protein 3716476..3718296 Burkholderia pseudomallei MSHR346 7888248 YP_002898536.1 CDS GBP346_A3871 NC_012695.1 3718286 3718486 D hypothetical protein 3718286..3718486 Burkholderia pseudomallei MSHR346 7889688 YP_002898537.1 CDS GBP346_A3872 NC_012695.1 3718535 3719095 R identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase complement(3718535..3719095) Burkholderia pseudomallei MSHR346 7887444 YP_002898538.1 CDS GBP346_A3873 NC_012695.1 3719092 3720603 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino-acid carrier protein AlsT complement(3719092..3720603) Burkholderia pseudomallei MSHR346 7889258 YP_002898539.1 CDS gltD NC_012695.1 3720884 3722350 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(3720884..3722350) Burkholderia pseudomallei MSHR346 7887042 YP_002898540.1 CDS gltB NC_012695.1 3722444 3727147 R identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit complement(3722444..3727147) Burkholderia pseudomallei MSHR346 7888840 YP_002898541.1 CDS GBP346_A3876 NC_012695.1 3727438 3728151 R identified by match to protein family HMM PF07605; transposase or inactivated derivative complement(3727438..3728151) Burkholderia pseudomallei MSHR346 7889702 YP_002898542.1 CDS GBP346_A3877 NC_012695.1 3728344 3729075 D identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 3728344..3729075 Burkholderia pseudomallei MSHR346 7890346 YP_002898543.1 CDS ugpQ NC_012695.1 3729221 3729982 R hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase complement(3729221..3729982) Burkholderia pseudomallei MSHR346 7888063 YP_002898544.1 CDS ugpC NC_012695.1 3730027 3731109 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(3730027..3731109) Burkholderia pseudomallei MSHR346 7887198 YP_002898545.1 CDS GBP346_A3880 NC_012695.1 3731135 3731980 R with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein complement(3731135..3731980) Burkholderia pseudomallei MSHR346 7888057 YP_002898546.1 CDS GBP346_A3881 NC_012695.1 3731977 3732945 R identified by match to protein family HMM PF00528; sn-glycerol-3-phosphate transport system permease protein UgpA complement(3731977..3732945) Burkholderia pseudomallei MSHR346 7890171 YP_002898547.1 CDS GBP346_A3882 NC_012695.1 3732992 3734317 R with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein complement(3732992..3734317) Burkholderia pseudomallei MSHR346 7887024 YP_002898548.1 CDS GBP346_A3883 NC_012695.1 3734402 3735634 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3734402..3735634) Burkholderia pseudomallei MSHR346 7888822 YP_002898549.1 CDS aroB NC_012695.1 3735683 3736762 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3735683..3736762) Burkholderia pseudomallei MSHR346 7886996 YP_002898550.1 CDS aroK NC_012695.1 3736759 3737388 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3736759..3737388) Burkholderia pseudomallei MSHR346 7888210 YP_002898551.1 CDS pilQ NC_012695.1 3737394 3739052 R identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515; type IV pilus secretin PilQ complement(3737394..3739052) Burkholderia pseudomallei MSHR346 7890048 YP_002898552.1 CDS GBP346_A3887 NC_012695.1 3739118 3740077 R hypothetical protein complement(3739118..3740077) Burkholderia pseudomallei MSHR346 7890098 YP_002898553.1 CDS GBP346_A3888 NC_012695.1 3740074 3740742 R identified by match to protein family HMM PF05137; putative PilN protein complement(3740074..3740742) Burkholderia pseudomallei MSHR346 7887620 YP_002898554.1 CDS GBP346_A3889 NC_012695.1 3740751 3741698 R hypothetical protein complement(3740751..3741698) Burkholderia pseudomallei MSHR346 7889989 YP_002898555.1 CDS GBP346_A3890 NC_012695.1 3742011 3744332 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A 3742011..3744332 Burkholderia pseudomallei MSHR346 7889582 YP_002898556.1 CDS cyaY NC_012695.1 3744448 3744774 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(3744448..3744774) Burkholderia pseudomallei MSHR346 7889127 YP_002898557.1 CDS GBP346_A3892 NC_012695.1 3744811 3745095 D putative lipoprotein 3744811..3745095 Burkholderia pseudomallei MSHR346 7887535 YP_002898558.1 CDS lysA NC_012695.1 3745106 3746377 D identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 3745106..3746377 Burkholderia pseudomallei MSHR346 7889705 YP_002898559.1 CDS GBP346_A3894 NC_012695.1 3746454 3746597 R hypothetical protein complement(3746454..3746597) Burkholderia pseudomallei MSHR346 7890945 YP_002898560.1 CDS GBP346_A3895 NC_012695.1 3746630 3747355 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ complement(3746630..3747355) Burkholderia pseudomallei MSHR346 7889615 YP_002898561.1 CDS GBP346_A3896 NC_012695.1 3747365 3748360 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(3747365..3748360) Burkholderia pseudomallei MSHR346 7887687 YP_002898562.1 CDS GBP346_A3897 NC_012695.1 3748538 3749728 R identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144; cytochrome c assembly protein complement(3748538..3749728) Burkholderia pseudomallei MSHR346 7890794 YP_002898563.1 CDS GBP346_A3898 NC_012695.1 3749733 3751910 R identified by match to protein family HMM PF05140; cytochrome c assembly family protein complement(3749733..3751910) Burkholderia pseudomallei MSHR346 7886706 YP_002898564.1 CDS GBP346_A3899 NC_012695.1 3752041 3752625 R identified by match to protein family HMM PF00034; cytochrome c family protein complement(3752041..3752625) Burkholderia pseudomallei MSHR346 7889581 YP_002898565.1 CDS engB NC_012695.1 3752905 3753564 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3752905..3753564 Burkholderia pseudomallei MSHR346 7888024 YP_002898566.1 CDS hemB NC_012695.1 3753758 3754846 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3753758..3754846 Burkholderia pseudomallei MSHR346 7890512 YP_002898567.1 CDS GBP346_A3902 NC_012695.1 3755062 3756945 R identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD (Protein-disulfide reductase) (Disulfide reductase) complement(3755062..3756945) Burkholderia pseudomallei MSHR346 7887018 YP_002898568.1 CDS GBP346_A3903 NC_012695.1 3756938 3757288 R identified by match to protein family HMM PF03091; periplasmic divalent cation tolerance protein complement(3756938..3757288) Burkholderia pseudomallei MSHR346 7890383 YP_002898569.1 CDS rplQ NC_012695.1 3757423 3757818 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3757423..3757818) Burkholderia pseudomallei MSHR346 7888270 YP_002898570.1 CDS rpoA NC_012695.1 3757959 3758936 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3757959..3758936) Burkholderia pseudomallei MSHR346 7889810 YP_002898571.1 CDS rpsD NC_012695.1 3759064 3759687 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3759064..3759687) Burkholderia pseudomallei MSHR346 7887168 YP_002898572.1 CDS rpsK NC_012695.1 3759838 3760239 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3759838..3760239) Burkholderia pseudomallei MSHR346 7890718 YP_002898573.1 CDS rpsM NC_012695.1 3760263 3760628 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3760263..3760628) Burkholderia pseudomallei MSHR346 7887798 YP_002898574.1 CDS rpmJ NC_012695.1 3760667 3760783 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3760667..3760783) Burkholderia pseudomallei MSHR346 7889686 YP_002898575.1 CDS infA NC_012695.1 3760804 3761022 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3760804..3761022) Burkholderia pseudomallei MSHR346 7890382 YP_002898576.1 CDS secY NC_012695.1 3761032 3762378 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3761032..3762378) Burkholderia pseudomallei MSHR346 7890007 YP_002898577.1 CDS rplO NC_012695.1 3762423 3762857 R late assembly protein; 50S ribosomal protein L15 complement(3762423..3762857) Burkholderia pseudomallei MSHR346 7888314 YP_002898578.1 CDS rpmD NC_012695.1 3762886 3763068 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3762886..3763068) Burkholderia pseudomallei MSHR346 7887491 YP_002898579.1 CDS rpsE NC_012695.1 3763084 3763602 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3763084..3763602) Burkholderia pseudomallei MSHR346 7887001 YP_002898580.1 CDS rplR NC_012695.1 3763616 3763981 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3763616..3763981) Burkholderia pseudomallei MSHR346 7889839 YP_002898581.1 CDS rplF NC_012695.1 3763994 3764524 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3763994..3764524) Burkholderia pseudomallei MSHR346 7888267 YP_002898582.1 CDS rpsH NC_012695.1 3764545 3764940 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3764545..3764940) Burkholderia pseudomallei MSHR346 7889687 YP_002898583.1 CDS rpsN NC_012695.1 3764955 3765260 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(3764955..3765260) Burkholderia pseudomallei MSHR346 7889628 YP_002898584.1 CDS rplE NC_012695.1 3765268 3765807 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3765268..3765807) Burkholderia pseudomallei MSHR346 7889646 YP_002898585.1 CDS rplX NC_012695.1 3765825 3766133 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3765825..3766133) Burkholderia pseudomallei MSHR346 7889073 YP_002898586.1 CDS rplN NC_012695.1 3766143 3766511 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3766143..3766511) Burkholderia pseudomallei MSHR346 7888685 YP_002898587.1 CDS rpsQ NC_012695.1 3766821 3767093 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3766821..3767093) Burkholderia pseudomallei MSHR346 7889145 YP_002898588.1 CDS rpmC NC_012695.1 3767090 3767284 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3767090..3767284) Burkholderia pseudomallei MSHR346 7886832 YP_002898589.1 CDS rplP NC_012695.1 3767294 3767710 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3767294..3767710) Burkholderia pseudomallei MSHR346 7886902 YP_002898590.1 CDS rpsC NC_012695.1 3767713 3768513 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3767713..3768513) Burkholderia pseudomallei MSHR346 7889102 YP_002898591.1 CDS rplV NC_012695.1 3768525 3768854 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3768525..3768854) Burkholderia pseudomallei MSHR346 7890160 YP_002898592.1 CDS rpsS NC_012695.1 3768867 3769142 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3768867..3769142) Burkholderia pseudomallei MSHR346 7890232 YP_002898593.1 CDS rplB NC_012695.1 3769153 3769980 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3769153..3769980) Burkholderia pseudomallei MSHR346 7888798 YP_002898594.1 CDS rplW NC_012695.1 3769983 3770297 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3769983..3770297) Burkholderia pseudomallei MSHR346 7889065 YP_002898595.1 CDS rplD NC_012695.1 3770294 3770914 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3770294..3770914) Burkholderia pseudomallei MSHR346 7888683 YP_002898596.1 CDS rplC NC_012695.1 3770914 3771585 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3770914..3771585) Burkholderia pseudomallei MSHR346 7889051 YP_002898597.1 CDS rpsJ NC_012695.1 3771761 3772072 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3771761..3772072) Burkholderia pseudomallei MSHR346 7887622 YP_002898598.1 CDS tuf_1 NC_012695.1 3772225 3773415 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3772225..3773415) Burkholderia pseudomallei MSHR346 7888392 YP_002898599.1 CDS fusA_2 NC_012695.1 3773457 3775559 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3773457..3775559) Burkholderia pseudomallei MSHR346 7888006 YP_002898600.1 CDS rpsG NC_012695.1 3775681 3776151 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3775681..3776151) Burkholderia pseudomallei MSHR346 7889771 YP_002898601.1 CDS rpsL NC_012695.1 3776322 3776702 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3776322..3776702) Burkholderia pseudomallei MSHR346 7887114 YP_002898602.1 CDS GBP346_A3937 NC_012695.1 3776685 3776798 D identified by glimmer; putative; hypothetical protein 3776685..3776798 Burkholderia pseudomallei MSHR346 7890658 YP_002898603.1 CDS recQ NC_012695.1 3776918 3778765 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ complement(3776918..3778765) Burkholderia pseudomallei MSHR346 7890607 YP_002898604.1 CDS GBP346_A3939 NC_012695.1 3778805 3778951 D hypothetical protein 3778805..3778951 Burkholderia pseudomallei MSHR346 7890521 YP_002898605.1 CDS GBP346_A3940 NC_012695.1 3778983 3780203 D identified by match to protein family HMM PF01610; transposase 3778983..3780203 Burkholderia pseudomallei MSHR346 7890843 YP_002898606.1 CDS rpoC NC_012695.1 3780279 3784517 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3780279..3784517) Burkholderia pseudomallei MSHR346 7890656 YP_002898607.1 CDS rpoB NC_012695.1 3784539 3788645 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3784539..3788645) Burkholderia pseudomallei MSHR346 7886862 YP_002898608.1 CDS rplL NC_012695.1 3789009 3789383 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3789009..3789383) Burkholderia pseudomallei MSHR346 7889602 YP_002898609.1 CDS rplJ NC_012695.1 3789447 3790001 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3789447..3790001) Burkholderia pseudomallei MSHR346 7889110 YP_002898610.1 CDS rplA NC_012695.1 3790242 3790940 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3790242..3790940) Burkholderia pseudomallei MSHR346 7887758 YP_002898611.1 CDS rplK NC_012695.1 3790941 3791372 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3790941..3791372) Burkholderia pseudomallei MSHR346 7887817 YP_002898612.1 CDS nusG NC_012695.1 3791518 3792075 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3791518..3792075) Burkholderia pseudomallei MSHR346 7887354 YP_002898613.1 CDS secE NC_012695.1 3792077 3792457 R forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3792077..3792457) Burkholderia pseudomallei MSHR346 7887601 YP_002898614.1 CDS tuf_2 NC_012695.1 3792635 3793825 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3792635..3793825) Burkholderia pseudomallei MSHR346 7889211 YP_002898615.1 CDS GBP346_A3955 NC_012695.1 3794226 3794354 D hypothetical protein 3794226..3794354 Burkholderia pseudomallei MSHR346 7889181 YP_002898616.1 CDS GBP346_A3954 NC_012695.1 3794348 3794461 R hypothetical protein complement(3794348..3794461) Burkholderia pseudomallei MSHR346 7888439 YP_002898617.1 CDS GBP346_A3960 NC_012695.1 3800363 3800479 R hypothetical protein complement(3800363..3800479) Burkholderia pseudomallei MSHR346 7887082 YP_002898618.1 CDS GBP346_A3961 NC_012695.1 3800846 3802123 R identified by match to protein family HMM PF00657; lipolytic enzyme, G-D-S-L complement(3800846..3802123) Burkholderia pseudomallei MSHR346 7887955 YP_002898619.1 CDS paaA NC_012695.1 3802773 3803771 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3802773..3803771 Burkholderia pseudomallei MSHR346 7889738 YP_002898620.1 CDS paaB NC_012695.1 3803777 3804118 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3803777..3804118 Burkholderia pseudomallei MSHR346 7888493 YP_002898621.1 CDS paaI NC_012695.1 3804129 3804932 D identified by match to protein family HMM PF05138; match to protein family HMM TIGR02158; phenylacetate-CoA oxygenase, PaaI subunit 3804129..3804932 Burkholderia pseudomallei MSHR346 7887218 YP_002898622.1 CDS paaJ NC_012695.1 3804968 3805588 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01883; match to protein family HMM TIGR02159; phenylacetate-CoA oxygenase, PaaJ subunit 3804968..3805588 Burkholderia pseudomallei MSHR346 7888724 YP_002898623.1 CDS paaK NC_012695.1 3805590 3806678 D identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02160; phenylacetate-CoA oxygenase/reductase, PaaK subunit 3805590..3806678 Burkholderia pseudomallei MSHR346 7890620 YP_002898624.1 CDS GBP346_A3967 NC_012695.1 3806815 3807630 D identified by match to protein family HMM PF08874; hypothetical protein 3806815..3807630 Burkholderia pseudomallei MSHR346 7888442 YP_002898625.1 CDS GBP346_A3968 NC_012695.1 3807657 3808256 D identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 3807657..3808256 Burkholderia pseudomallei MSHR346 7887810 YP_002898626.1 CDS GBP346_A3969 NC_012695.1 3808499 3809146 D identified by match to protein family HMM PF00583; acetyltransferase, gnat family 3808499..3809146 Burkholderia pseudomallei MSHR346 7889877 YP_002898627.1 CDS GBP346_A3970 NC_012695.1 3809265 3809843 R identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family complement(3809265..3809843) Burkholderia pseudomallei MSHR346 7888523 YP_002898628.1 CDS hppD NC_012695.1 3809932 3811029 D 4-hydroxyphenylpyruvate dioxygenase 3809932..3811029 Burkholderia pseudomallei MSHR346 7890122 YP_002898629.1 CDS GBP346_A3972 NC_012695.1 3811265 3811462 R hypothetical protein complement(3811265..3811462) Burkholderia pseudomallei MSHR346 7890038 YP_002898630.1 CDS GBP346_A3973 NC_012695.1 3811782 3815363 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3811782..3815363 Burkholderia pseudomallei MSHR346 7887959 YP_002898631.1 CDS GBP346_A3974 NC_012695.1 3815360 3815512 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 6-phosphofructokinase 3815360..3815512 Burkholderia pseudomallei MSHR346 7889021 YP_002898632.1 CDS GBP346_A3975 NC_012695.1 3815897 3818167 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3815897..3818167) Burkholderia pseudomallei MSHR346 7890426 YP_002898633.1 CDS GBP346_A3976 NC_012695.1 3818352 3818597 R hypothetical protein complement(3818352..3818597) Burkholderia pseudomallei MSHR346 7889140 YP_002898634.1 CDS pyrE NC_012695.1 3818697 3819383 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3818697..3819383 Burkholderia pseudomallei MSHR346 7888013 YP_002898635.1 CDS GBP346_A3978 NC_012695.1 3819706 3820281 D identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 3819706..3820281 Burkholderia pseudomallei MSHR346 7886782 YP_002898636.1 CDS GBP346_A3979 NC_012695.1 3820382 3820651 R hypothetical protein complement(3820382..3820651) Burkholderia pseudomallei MSHR346 7887663 YP_002898637.1 CDS GBP346_A3980 NC_012695.1 3820667 3821242 D identified by match to protein family HMM PF00258; putative flavodoxin 3820667..3821242 Burkholderia pseudomallei MSHR346 7889997 YP_002898638.1 CDS argC NC_012695.1 3821395 3822339 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3821395..3822339 Burkholderia pseudomallei MSHR346 7890415 YP_002898639.1 CDS GBP346_A3982 NC_012695.1 3822356 3822484 D hypothetical protein 3822356..3822484 Burkholderia pseudomallei MSHR346 7888393 YP_002898640.1 CDS GBP346_A3983 NC_012695.1 3822886 3824187 D hypothetical protein 3822886..3824187 Burkholderia pseudomallei MSHR346 7887289 YP_002898641.1 CDS GBP346_A3984 NC_012695.1 3824313 3825563 D putative lipoprotein 3824313..3825563 Burkholderia pseudomallei MSHR346 7889837 YP_002898642.1 CDS GBP346_A3985 NC_012695.1 3825583 3826413 D identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 3825583..3826413 Burkholderia pseudomallei MSHR346 7890776 YP_002898643.1 CDS GBP346_A3986 NC_012695.1 3826601 3827539 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(3826601..3827539) Burkholderia pseudomallei MSHR346 7886957 YP_002898644.1 CDS GBP346_A3987 NC_012695.1 3828165 3828860 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; MFS permease 3828165..3828860 Burkholderia pseudomallei MSHR346 7890609 YP_002898645.1 CDS GBP346_A3988 NC_012695.1 3828951 3829619 R identified by match to protein family HMM PF01810; translocator protein, LysE family complement(3828951..3829619) Burkholderia pseudomallei MSHR346 7888729 YP_002898646.1 CDS GBP346_A3989 NC_012695.1 3829718 3830587 R identified by match to protein family HMM PF03446; match to protein family HMM PF03807; dehydrogenase complement(3829718..3830587) Burkholderia pseudomallei MSHR346 7889546 YP_002898647.1 CDS GBP346_A3990 NC_012695.1 3830714 3831469 D identified by match to protein family HMM PF01927; hypothetical protein 3830714..3831469 Burkholderia pseudomallei MSHR346 7886705 YP_002898648.1 CDS GBP346_A3991 NC_012695.1 3831601 3831831 R hypothetical protein complement(3831601..3831831) Burkholderia pseudomallei MSHR346 7889634 YP_002898649.1 CDS GBP346_A3992 NC_012695.1 3831976 3832098 R identified by glimmer; putative; hypothetical protein complement(3831976..3832098) Burkholderia pseudomallei MSHR346 7887678 YP_002898650.1 CDS GBP346_A3993 NC_012695.1 3832052 3832543 R hypothetical protein complement(3832052..3832543) Burkholderia pseudomallei MSHR346 7888321 YP_002898651.1 CDS GBP346_A3994 NC_012695.1 3832497 3832712 D hypothetical protein 3832497..3832712 Burkholderia pseudomallei MSHR346 7888933 YP_002898652.1 CDS GBP346_A3995 NC_012695.1 3832795 3833292 D hypothetical protein 3832795..3833292 Burkholderia pseudomallei MSHR346 7886983 YP_002898653.1 CDS GBP346_A3996 NC_012695.1 3834082 3834195 R hypothetical protein complement(3834082..3834195) Burkholderia pseudomallei MSHR346 7886923 YP_002898654.1 CDS GBP346_A3997 NC_012695.1 3834501 3834818 R hypothetical protein complement(3834501..3834818) Burkholderia pseudomallei MSHR346 7887865 YP_002898655.1 CDS GBP346_A3998 NC_012695.1 3834787 3834900 D hypothetical protein 3834787..3834900 Burkholderia pseudomallei MSHR346 7888578 YP_002898656.1 CDS GBP346_A3999 NC_012695.1 3835113 3835310 R hypothetical protein complement(3835113..3835310) Burkholderia pseudomallei MSHR346 7886909 YP_002898657.1 CDS GBP346_A4000 NC_012695.1 3835333 3836739 D identified by match to protein family HMM PF00324; proline-specific permease ProY 3835333..3836739 Burkholderia pseudomallei MSHR346 7889151 YP_002898658.1 CDS GBP346_A4002 NC_012695.1 3837053 3837418 R identified by match to protein family HMM PF00034; cytochrome c family protein complement(3837053..3837418) Burkholderia pseudomallei MSHR346 7889192 YP_002898659.1 CDS GBP346_A4003 NC_012695.1 3837415 3838215 R identified by match to protein family HMM PF04972; transport-associated protein complement(3837415..3838215) Burkholderia pseudomallei MSHR346 7887897 YP_002898660.1 CDS GBP346_A4004 NC_012695.1 3838234 3838812 R phosphoheptose isomerase complement(3838234..3838812) Burkholderia pseudomallei MSHR346 7889385 YP_002898661.1 CDS GBP346_A4005 NC_012695.1 3838935 3839417 R identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein complement(3838935..3839417) Burkholderia pseudomallei MSHR346 7888924 YP_002898662.1 CDS GBP346_A4006 NC_012695.1 3839416 3840300 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 3839416..3840300 Burkholderia pseudomallei MSHR346 7887105 YP_002898663.1 CDS GBP346_A4007 NC_012695.1 3840395 3841087 R identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A family protein complement(3840395..3841087) Burkholderia pseudomallei MSHR346 7886860 YP_002898664.1 CDS GBP346_A4008 NC_012695.1 3841631 3842275 D identified by match to protein family HMM PF00753; hydrolase 3841631..3842275 Burkholderia pseudomallei MSHR346 7887295 YP_002898665.1 CDS GBP346_A4009 NC_012695.1 3842272 3842928 D exonuclease 3842272..3842928 Burkholderia pseudomallei MSHR346 7887041 YP_002898666.1 CDS GBP346_A4010 NC_012695.1 3843019 3843477 D identified by match to protein family HMM PF01037; Bkd operon transcriptional regulator 3843019..3843477 Burkholderia pseudomallei MSHR346 7890144 YP_002898667.1 CDS GBP346_A4011 NC_012695.1 3843656 3844846 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(3843656..3844846) Burkholderia pseudomallei MSHR346 7888709 YP_002898668.1 CDS GBP346_A4012 NC_012695.1 3844837 3844992 D hypothetical protein 3844837..3844992 Burkholderia pseudomallei MSHR346 7887685 YP_002898669.1 CDS GBP346_A4013 NC_012695.1 3845086 3845379 R identified by match to protein family HMM PF00816; H-NS histone family protein complement(3845086..3845379) Burkholderia pseudomallei MSHR346 7887599 YP_002898670.1 CDS GBP346_A4014 NC_012695.1 3845467 3845646 R identified by glimmer; putative; hypothetical protein complement(3845467..3845646) Burkholderia pseudomallei MSHR346 7887564 YP_002898671.1 CDS GBP346_A4015 NC_012695.1 3845764 3846444 R identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein complement(3845764..3846444) Burkholderia pseudomallei MSHR346 7890787 YP_002898672.1 CDS GBP346_A4016 NC_012695.1 3846757 3847965 D identified by match to protein family HMM PF07690; putative amino acid ABC transporter, permease protein 3846757..3847965 Burkholderia pseudomallei MSHR346 7889268 YP_002898673.1 CDS GBP346_A4017 NC_012695.1 3848155 3849297 R identified by match to protein family HMM PF01094; putative amino acid ABC transporter, periplasmic amino acid-binding protein complement(3848155..3849297) Burkholderia pseudomallei MSHR346 7890603 YP_002898674.1 CDS GBP346_A4018 NC_012695.1 3849753 3850853 R identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family complement(3849753..3850853) Burkholderia pseudomallei MSHR346 7888716 YP_002898675.1 CDS GBP346_A4019 NC_012695.1 3850850 3851116 R hypothetical protein complement(3850850..3851116) Burkholderia pseudomallei MSHR346 7887592 YP_002898676.1 CDS GBP346_A4020 NC_012695.1 3851180 3851872 D identified by match to protein family HMM PF01738; dienelactone hydrolase family protein 3851180..3851872 Burkholderia pseudomallei MSHR346 7889992 YP_002898677.1 CDS GBP346_A4021 NC_012695.1 3851917 3853458 D identified by match to protein family HMM PF01425; amidase family protein 3851917..3853458 Burkholderia pseudomallei MSHR346 7887275 YP_002898678.1 CDS metF NC_012695.1 3853648 3854478 R identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; methylenetetrahydrofolate reductase (NAD(P)H) complement(3853648..3854478) Burkholderia pseudomallei MSHR346 7887562 YP_002898679.1 CDS GBP346_A4023 NC_012695.1 3854496 3854849 R identified by match to protein family HMM PF04020; hypothetical protein complement(3854496..3854849) Burkholderia pseudomallei MSHR346 7890445 YP_002898680.1 CDS ahcY NC_012695.1 3855013 3856434 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3855013..3856434) Burkholderia pseudomallei MSHR346 7890799 YP_002898681.1 CDS GBP346_A4025 NC_012695.1 3856399 3856623 D hypothetical protein 3856399..3856623 Burkholderia pseudomallei MSHR346 7887404 YP_002898682.1 CDS fliA NC_012695.1 3856788 3857522 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(3856788..3857522) Burkholderia pseudomallei MSHR346 7890227 YP_002898683.1 CDS GBP346_A4027 NC_012695.1 3857544 3858356 R flagellar biosynthesisprotein, FlhG complement(3857544..3858356) Burkholderia pseudomallei MSHR346 7887763 YP_002898684.1 CDS flhF NC_012695.1 3858349 3860100 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(3858349..3860100) Burkholderia pseudomallei MSHR346 7889519 YP_002898685.1 CDS flhA NC_012695.1 3860097 3862199 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(3860097..3862199) Burkholderia pseudomallei MSHR346 7889532 YP_002898686.1 CDS flhB NC_012695.1 3862196 3863401 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(3862196..3863401) Burkholderia pseudomallei MSHR346 7888372 YP_002898687.1 CDS GBP346_A4031 NC_012695.1 3864094 3864594 R identified by match to protein family HMM PF06983; 3-demethylubiquinone-9 3-methyltransferase family protein complement(3864094..3864594) Burkholderia pseudomallei MSHR346 7890462 YP_002898688.1 CDS GBP346_A4032 NC_012695.1 3864783 3866087 R putative lipoprotein complement(3864783..3866087) Burkholderia pseudomallei MSHR346 7889070 YP_002898689.1 CDS GBP346_A4033 NC_012695.1 3866110 3866613 R hypothetical protein complement(3866110..3866613) Burkholderia pseudomallei MSHR346 7889408 YP_002898690.1 CDS GBP346_A4034 NC_012695.1 3866811 3867521 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(3866811..3867521) Burkholderia pseudomallei MSHR346 7890633 YP_002898691.1 CDS GBP346_A4035 NC_012695.1 3867541 3867936 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(3867541..3867936) Burkholderia pseudomallei MSHR346 7889749 YP_002898692.1 CDS GBP346_A4036 NC_012695.1 3868285 3869379 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(3868285..3869379) Burkholderia pseudomallei MSHR346 7887988 YP_002898693.1 CDS GBP346_A4037 NC_012695.1 3869385 3870089 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(3869385..3870089) Burkholderia pseudomallei MSHR346 7888422 YP_002898694.1 CDS GBP346_A4038 NC_012695.1 3870086 3871033 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase complement(3870086..3871033) Burkholderia pseudomallei MSHR346 7887945 YP_002898695.1 CDS GBP346_A4039 NC_012695.1 3871037 3873040 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) complement(3871037..3873040) Burkholderia pseudomallei MSHR346 7890852 YP_002898696.1 CDS GBP346_A4040 NC_012695.1 3873081 3873608 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(3873081..3873608) Burkholderia pseudomallei MSHR346 7890667 YP_002898697.1 CDS GBP346_A4041 NC_012695.1 3873639 3875954 R identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF09078; chemotaxis protein CheA complement(3873639..3875954) Burkholderia pseudomallei MSHR346 7888533 YP_002898698.1 CDS GBP346_A4042 NC_012695.1 3875986 3876366 R identified by match to protein family HMM PF00072; chemotaxis response regulator complement(3875986..3876366) Burkholderia pseudomallei MSHR346 7889829 YP_002898699.1 CDS motB NC_012695.1 3876397 3877419 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(3876397..3877419) Burkholderia pseudomallei MSHR346 7888803 YP_002898700.1 CDS GBP346_A4044 NC_012695.1 3877436 3878296 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(3877436..3878296) Burkholderia pseudomallei MSHR346 7889493 YP_002898701.1 CDS GBP346_A4045 NC_012695.1 3878490 3879041 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(3878490..3879041) Burkholderia pseudomallei MSHR346 7886797 YP_002898702.1 CDS GBP346_A4046 NC_012695.1 3879135 3879455 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(3879135..3879455) Burkholderia pseudomallei MSHR346 7889085 YP_002898703.1 CDS GBP346_A4047 NC_012695.1 3880048 3881112 D identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 3880048..3881112 Burkholderia pseudomallei MSHR346 7890646 YP_002898704.1 CDS GBP346_A4048 NC_012695.1 3881216 3881428 R H-NS histone family protein complement(3881216..3881428) Burkholderia pseudomallei MSHR346 7886726 YP_002898705.1 CDS GBP346_A4049 NC_012695.1 3881411 3881617 D hypothetical protein 3881411..3881617 Burkholderia pseudomallei MSHR346 7889772 YP_002898706.1 CDS GBP346_A4050 NC_012695.1 3881584 3881709 D identified by glimmer; putative; hypothetical protein 3881584..3881709 Burkholderia pseudomallei MSHR346 7888838 YP_002898707.1 CDS aqpZ NC_012695.1 3881818 3882522 D porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 3881818..3882522 Burkholderia pseudomallei MSHR346 7888349 YP_002898708.1 CDS GBP346_A4052 NC_012695.1 3882711 3883532 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD hydrolase, IIB family complement(3882711..3883532) Burkholderia pseudomallei MSHR346 7889456 YP_002898709.1 CDS GBP346_A4053 NC_012695.1 3883650 3884585 R identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase family protein complement(3883650..3884585) Burkholderia pseudomallei MSHR346 7890190 YP_002898710.1 CDS GBP346_A4054 NC_012695.1 3884691 3885299 D identified by match to protein family HMM PF03352; DNA-3-methyladenine glycosylase 1 3884691..3885299 Burkholderia pseudomallei MSHR346 7887363 YP_002898711.1 CDS GBP346_A4056 NC_012695.1 3885250 3885696 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3885250..3885696 Burkholderia pseudomallei MSHR346 7887320 YP_002898712.1 CDS rpsU NC_012695.1 3885693 3885956 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3885693..3885956) Burkholderia pseudomallei MSHR346 7890447 YP_002898713.1 CDS GBP346_A4057 NC_012695.1 3886463 3887629 D structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 3886463..3887629 Burkholderia pseudomallei MSHR346 7888861 YP_002898714.1 CDS GBP346_A4058 NC_012695.1 3887779 3889299 D identified by match to protein family HMM PF02465; match to protein family HMM PF07195; match to protein family HMM PF07196; flagellar hook-associated protein 3887779..3889299 Burkholderia pseudomallei MSHR346 7890861 YP_002898715.1 CDS GBP346_A4059 NC_012695.1 3889313 3889627 D hypothetical protein 3889313..3889627 Burkholderia pseudomallei MSHR346 7887733 YP_002898716.1 CDS GBP346_A4060 NC_012695.1 3889851 3892181 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain protein 3889851..3892181 Burkholderia pseudomallei MSHR346 7889365 YP_002898717.1 CDS GBP346_A4061 NC_012695.1 3892178 3893326 D identified by match to protein family HMM PF01041; match to protein family HMM PF01212; aminotransferase, DegT/DnrJ/EryC1/StrS family 3892178..3893326 Burkholderia pseudomallei MSHR346 7890849 YP_002898718.1 CDS GBP346_A4062 NC_012695.1 3893323 3894357 D identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3893323..3894357 Burkholderia pseudomallei MSHR346 7890201 YP_002898719.1 CDS GBP346_A4063 NC_012695.1 3894369 3894590 D hypothetical protein 3894369..3894590 Burkholderia pseudomallei MSHR346 7888374 YP_002898720.1 CDS GBP346_A4064 NC_012695.1 3894593 3895657 D identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3894593..3895657 Burkholderia pseudomallei MSHR346 7887782 YP_002898721.1 CDS GBP346_A4065 NC_012695.1 3895660 3896418 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 3895660..3896418 Burkholderia pseudomallei MSHR346 7888180 YP_002898722.1 CDS GBP346_A4066 NC_012695.1 3896418 3897050 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR03570; hexapeptide transferase family protein 3896418..3897050 Burkholderia pseudomallei MSHR346 7889716 YP_002898723.1 CDS GBP346_A4067 NC_012695.1 3897052 3898116 D identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain protein 3897052..3898116 Burkholderia pseudomallei MSHR346 7887409 YP_002898724.1 CDS GBP346_A4068 NC_012695.1 3898196 3899050 R hypothetical protein complement(3898196..3899050) Burkholderia pseudomallei MSHR346 7889091 YP_002898725.1 CDS GBP346_A4069 NC_012695.1 3899258 3900058 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3899258..3900058) Burkholderia pseudomallei MSHR346 7889692 YP_002898726.1 CDS GBP346_A4070 NC_012695.1 3900076 3900189 D hypothetical protein 3900076..3900189 Burkholderia pseudomallei MSHR346 7888839 YP_002898727.1 CDS GBP346_A4071 NC_012695.1 3900226 3900849 D identified by match to protein family HMM PF01810; translocator protein, LysE family 3900226..3900849 Burkholderia pseudomallei MSHR346 7888227 YP_002898728.1 CDS acpA_2 NC_012695.1 3901150 3902811 R identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409; match to protein family HMM TIGR03397; acid phosphatase AcpA complement(3901150..3902811) Burkholderia pseudomallei MSHR346 7888394 YP_002898729.1 CDS GBP346_A4073 NC_012695.1 3902808 3903005 R hypothetical protein complement(3902808..3903005) Burkholderia pseudomallei MSHR346 7890782 YP_002898730.1 CDS GBP346_A4074 NC_012695.1 3903099 3903287 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3903099..3903287) Burkholderia pseudomallei MSHR346 7888888 YP_002898731.1 CDS GBP346_A4075 NC_012695.1 3903350 3904024 R identified by match to protein family HMM PF05643; lipoprotein complement(3903350..3904024) Burkholderia pseudomallei MSHR346 7887371 YP_002898732.1 CDS GBP346_A4076 NC_012695.1 3904033 3904461 R lipoprotein complement(3904033..3904461) Burkholderia pseudomallei MSHR346 7890312 YP_002898733.1 CDS GBP346_A4077 NC_012695.1 3904521 3905198 R identified by match to protein family HMM PF03783; CsgG family protein complement(3904521..3905198) Burkholderia pseudomallei MSHR346 7887903 YP_002898734.1 CDS GBP346_A4078 NC_012695.1 3905229 3905345 D identified by glimmer; putative; hypothetical protein 3905229..3905345 Burkholderia pseudomallei MSHR346 7887736 YP_002898735.1 CDS GBP346_A4079 NC_012695.1 3905416 3905820 R hypothetical protein complement(3905416..3905820) Burkholderia pseudomallei MSHR346 7890287 YP_002898736.1 CDS GBP346_A4080 NC_012695.1 3905828 3906214 R identified by glimmer; putative; hypothetical protein complement(3905828..3906214) Burkholderia pseudomallei MSHR346 7889811 YP_002898737.1 CDS GBP346_A4081 NC_012695.1 3906235 3907056 D identified by match to protein family HMM PF00561; 3-oxoadipate enol-lactone hydrolase family protein 3906235..3907056 Burkholderia pseudomallei MSHR346 7888483 YP_002898738.1 CDS GBP346_A4082 NC_012695.1 3907109 3908926 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(3907109..3908926) Burkholderia pseudomallei MSHR346 7890734 YP_002898739.1 CDS GBP346_A4083 NC_012695.1 3909070 3909186 R hypothetical protein complement(3909070..3909186) Burkholderia pseudomallei MSHR346 7888304 YP_002898740.1 CDS GBP346_A4084 NC_012695.1 3909195 3910856 R identified by match to protein family HMM PF01565; match to protein family HMM PF08031; hexose oxidase complement(3909195..3910856) Burkholderia pseudomallei MSHR346 7887413 YP_002898741.1 CDS GBP346_A4085 NC_012695.1 3911045 3911689 R identified by match to protein family HMM PF03067; fibronectin type III domain protein/ chitin binding domain protein complement(3911045..3911689) Burkholderia pseudomallei MSHR346 7888336 YP_002898742.1 CDS GBP346_A4086 NC_012695.1 3912727 3912957 D hypothetical protein 3912727..3912957 Burkholderia pseudomallei MSHR346 7887483 YP_002898743.1 CDS GBP346_A4088 NC_012695.1 3913534 3914361 D identified by match to protein family HMM PF00034; cytochrome c family protein 3913534..3914361 Burkholderia pseudomallei MSHR346 7889168 YP_002898744.1 CDS rep NC_012695.1 3914681 3916768 R identified by match to protein family HMM PF00580; ATP-dependent DNA helicase Rep complement(3914681..3916768) Burkholderia pseudomallei MSHR346 7888810 YP_002898745.1 CDS GBP346_A4090 NC_012695.1 3917066 3917860 D hypothetical protein 3917066..3917860 Burkholderia pseudomallei MSHR346 7889741 YP_002898746.1 CDS GBP346_A4091 NC_012695.1 3917926 3918633 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; lipolytic enzyme, G-D-S-L 3917926..3918633 Burkholderia pseudomallei MSHR346 7890305 YP_002898747.1 CDS GBP346_A4092 NC_012695.1 3918665 3918922 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; metallophosphoesterase complement(3918665..3918922) Burkholderia pseudomallei MSHR346 7887720 YP_002898748.1 CDS GBP346_A4093 NC_012695.1 3919182 3920234 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase family, NAD-binding Rossmann fold protein 3919182..3920234 Burkholderia pseudomallei MSHR346 7889331 YP_002898749.1 CDS GBP346_A4094 NC_012695.1 3920406 3920765 D putative lipoprotein 3920406..3920765 Burkholderia pseudomallei MSHR346 7887407 YP_002898750.1 CDS GBP346_A4095 NC_012695.1 3921119 3921589 R hypothetical protein complement(3921119..3921589) Burkholderia pseudomallei MSHR346 7887640 YP_002898751.1 CDS gcvT NC_012695.1 3921473 3922669 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3921473..3922669 Burkholderia pseudomallei MSHR346 7889675 YP_002898752.1 CDS gcvH NC_012695.1 3922763 3923143 D identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein 3922763..3923143 Burkholderia pseudomallei MSHR346 7887944 YP_002898753.1 CDS gcvP NC_012695.1 3923644 3926571 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3923644..3926571 Burkholderia pseudomallei MSHR346 7889693 YP_002898754.1 CDS GBP346_A4100 NC_012695.1 3926562 3926687 R hypothetical protein complement(3926562..3926687) Burkholderia pseudomallei MSHR346 7888471 YP_002898755.1 CDS GBP346_A4102 NC_012695.1 3926723 3927841 D hypothetical protein 3926723..3927841 Burkholderia pseudomallei MSHR346 7889566 YP_002898756.1 CDS GBP346_A4103 NC_012695.1 3927875 3929263 D identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 3927875..3929263 Burkholderia pseudomallei MSHR346 7887484 YP_002898757.1 CDS GBP346_A4104 NC_012695.1 3929298 3930434 R hypothetical protein complement(3929298..3930434) Burkholderia pseudomallei MSHR346 7889370 YP_002898758.1 CDS GBP346_A4105 NC_012695.1 3930707 3932410 D identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine pyrophosphate protein 3930707..3932410 Burkholderia pseudomallei MSHR346 7889442 YP_002898759.1 CDS GBP346_A4106 NC_012695.1 3932439 3933506 D hypothetical protein 3932439..3933506 Burkholderia pseudomallei MSHR346 7890450 YP_002898760.1 CDS GBP346_A4107 NC_012695.1 3933625 3934653 R identified by match to protein family HMM PF00165; ethanolamine operon transcriptional activator EutR complement(3933625..3934653) Burkholderia pseudomallei MSHR346 7890584 YP_002898761.1 CDS GBP346_A4109 NC_012695.1 3934850 3936469 D identified by match to protein family HMM PF00171; acetaldehyde dehydrogenase 2 (acetaldehyde dehydrogenaseii) (acdh-ii) 3934850..3936469 Burkholderia pseudomallei MSHR346 7888573 YP_002898762.1 CDS GBP346_A4108 NC_012695.1 3936439 3936981 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3936439..3936981) Burkholderia pseudomallei MSHR346 7889088 YP_002898763.1 CDS eutC NC_012695.1 3937047 3937850 R catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit complement(3937047..3937850) Burkholderia pseudomallei MSHR346 7889010 YP_002898764.1 CDS eutB NC_012695.1 3937847 3939244 R identified by match to protein family HMM PF06751; ethanolamine ammonia-lyase, large subunit complement(3937847..3939244) Burkholderia pseudomallei MSHR346 7890335 YP_002898765.1 CDS eat NC_012695.1 3939301 3940710 R identified by match to protein family HMM PF00324; match to protein family HMM TIGR00908; ethanolamine permease complement(3939301..3940710) Burkholderia pseudomallei MSHR346 7889907 YP_002898766.1 CDS GBP346_A4113 NC_012695.1 3940800 3941051 R hypothetical protein complement(3940800..3941051) Burkholderia pseudomallei MSHR346 7889703 YP_002898767.1 CDS GBP346_A4114 NC_012695.1 3941328 3942506 D identified by match to protein family HMM PF01757; putative acyltransferase 3941328..3942506 Burkholderia pseudomallei MSHR346 7887968 YP_002898768.1 CDS GBP346_A4115 NC_012695.1 3942546 3942728 D transcriptional regulator, GntR family with aminotransferase domain 3942546..3942728 Burkholderia pseudomallei MSHR346 7889526 YP_002898769.1 CDS GBP346_A4116 NC_012695.1 3942879 3944342 R identified by match to protein family HMM PF05552; conserved TM helix repeat-containing protein complement(3942879..3944342) Burkholderia pseudomallei MSHR346 7890339 YP_002898770.1 CDS GBP346_A4117 NC_012695.1 3944802 3945233 R hypothetical protein complement(3944802..3945233) Burkholderia pseudomallei MSHR346 7889958 YP_002898771.1 CDS GBP346_A4118 NC_012695.1 3945235 3945633 R hypothetical protein complement(3945235..3945633) Burkholderia pseudomallei MSHR346 7889281 YP_002898772.1 CDS GBP346_A4119 NC_012695.1 3945646 3948138 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; heavy metal cation transport ATPase complement(3945646..3948138) Burkholderia pseudomallei MSHR346 7886743 YP_002898773.1 CDS cadR NC_012695.1 3948221 3948652 D identified by match to protein family HMM PF00376; match to protein family HMM PF09278; match to protein family HMM TIGR02047; Cd(II)/Pb(II)-responsive transcriptional regulator 3948221..3948652 Burkholderia pseudomallei MSHR346 7888748 YP_002898774.1 CDS GBP346_A4121 NC_012695.1 3948752 3949393 D identified by match to protein family HMM PF03551; transcriptional regulator, PadR family 3948752..3949393 Burkholderia pseudomallei MSHR346 7890340 YP_002898775.1 CDS GBP346_A4122 NC_012695.1 3949452 3949985 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02913; oxidoreductase complement(3949452..3949985) Burkholderia pseudomallei MSHR346 7890084 YP_002898776.1 CDS GBP346_A4123 NC_012695.1 3949589 3950032 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD linked oxidase complement(3949589..3950032) Burkholderia pseudomallei MSHR346 7890421 YP_002898777.1 CDS GBP346_A4124 NC_012695.1 3949990 3950292 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD linked oxidase complement(3949990..3950292) Burkholderia pseudomallei MSHR346 7887745 YP_002898778.1 CDS GBP346_A4125 NC_012695.1 3950402 3951196 R identified by match to protein family HMM PF00497; lysine-arginine-ornithine-binding periplasmic protein complement(3950402..3951196) Burkholderia pseudomallei MSHR346 7889500 YP_002898779.1 CDS GBP346_A4126 NC_012695.1 3951250 3952404 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(3951250..3952404) Burkholderia pseudomallei MSHR346 7887437 YP_002898780.1 CDS GBP346_A4127 NC_012695.1 3952507 3953292 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3952507..3953292) Burkholderia pseudomallei MSHR346 7890505 YP_002898781.1 CDS GBP346_A4128 NC_012695.1 3953355 3954131 R identified by match to protein family HMM PF00440; transcriptional regulator, TetR family complement(3953355..3954131) Burkholderia pseudomallei MSHR346 7888003 YP_002898782.1 CDS GBP346_A4129 NC_012695.1 3954103 3955743 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; protein AidB 3954103..3955743 Burkholderia pseudomallei MSHR346 7888900 YP_002898783.1 CDS fcs NC_012695.1 3955860 3957407 D identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 3955860..3957407 Burkholderia pseudomallei MSHR346 7890255 YP_002898784.1 CDS GBP346_A4131 NC_012695.1 3957647 3958786 R identified by match to protein family HMM PF01094; putative periplasmic substrate-binding protein complement(3957647..3958786) Burkholderia pseudomallei MSHR346 7886792 YP_002898785.1 CDS putA NC_012695.1 3958871 3962800 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(3958871..3962800) Burkholderia pseudomallei MSHR346 7888952 YP_002898786.1 CDS GBP346_A4133 NC_012695.1 3962813 3962989 D hypothetical protein 3962813..3962989 Burkholderia pseudomallei MSHR346 7889572 YP_002898787.1 CDS GBP346_A4134 NC_012695.1 3963099 3963254 D hypothetical protein 3963099..3963254 Burkholderia pseudomallei MSHR346 7889228 YP_002898788.1 CDS priA NC_012695.1 3963265 3965532 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(3963265..3965532) Burkholderia pseudomallei MSHR346 7890644 YP_002898789.1 CDS GBP346_A4136 NC_012695.1 3965525 3965731 R hypothetical protein complement(3965525..3965731) Burkholderia pseudomallei MSHR346 7890499 YP_002898790.1 CDS hemE NC_012695.1 3965973 3967067 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(3965973..3967067) Burkholderia pseudomallei MSHR346 7887441 YP_002898791.1 CDS GBP346_A4138 NC_012695.1 3967207 3967992 D identified by match to protein family HMM PF00497; cyclohexadienyl dehydratase 3967207..3967992 Burkholderia pseudomallei MSHR346 7886945 YP_002898792.1 CDS GBP346_A4139 NC_012695.1 3968198 3968539 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; CoA-binding protein complement(3968198..3968539) Burkholderia pseudomallei MSHR346 7888199 YP_002898793.1 CDS GBP346_A4140 NC_012695.1 3968863 3969057 R hypothetical protein complement(3968863..3969057) Burkholderia pseudomallei MSHR346 7890045 YP_002898794.1 CDS GBP346_A4141 NC_012695.1 3969099 3970829 R identified by match to protein family HMM PF00501; AMP-binding domain protein complement(3969099..3970829) Burkholderia pseudomallei MSHR346 7890115 YP_002898795.1 CDS atpC NC_012695.1 3971062 3971487 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3971062..3971487) Burkholderia pseudomallei MSHR346 7889049 YP_002898796.1 CDS atpD_1 NC_012695.1 3971919 3973310 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3971919..3973310) Burkholderia pseudomallei MSHR346 7888067 YP_002898797.1 CDS atpG_1 NC_012695.1 3973390 3974265 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3973390..3974265) Burkholderia pseudomallei MSHR346 7888514 YP_002898798.1 CDS atpA_1 NC_012695.1 3974337 3975878 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3974337..3975878) Burkholderia pseudomallei MSHR346 7887843 YP_002898799.1 CDS atpH NC_012695.1 3975925 3976464 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3975925..3976464) Burkholderia pseudomallei MSHR346 7890344 YP_002898800.1 CDS atpF NC_012695.1 3976467 3976937 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3976467..3976937) Burkholderia pseudomallei MSHR346 7888429 YP_002898801.1 CDS GBP346_A4148 NC_012695.1 3977065 3977334 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3977065..3977334) Burkholderia pseudomallei MSHR346 7888427 YP_002898802.1 CDS atpB_1 NC_012695.1 3977411 3978280 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3977411..3978280) Burkholderia pseudomallei MSHR346 7887581 YP_002898803.1 CDS GBP346_A4150 NC_012695.1 3978375 3978566 R ATP synthase I chain complement(3978375..3978566) Burkholderia pseudomallei MSHR346 7888720 YP_002898804.1 CDS GBP346_A4152 NC_012695.1 3979057 3979185 D hypothetical protein 3979057..3979185 Burkholderia pseudomallei MSHR346 7887401 YP_002898805.1 CDS GBP346_A4151 NC_012695.1 3979176 3980309 R citrate transporter complement(3979176..3980309) Burkholderia pseudomallei MSHR346 7889798 YP_002898806.1 CDS GBP346_A4153 NC_012695.1 3980317 3981204 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; chromosome segregation DNA-binding protein complement(3980317..3981204) Burkholderia pseudomallei MSHR346 7890833 YP_002898807.1 CDS GBP346_A4154 NC_012695.1 3981240 3982010 R identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj complement(3981240..3982010) Burkholderia pseudomallei MSHR346 7887856 YP_002898808.1 CDS gidB NC_012695.1 3982063 3982704 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3982063..3982704) Burkholderia pseudomallei MSHR346 7888868 YP_002898809.1 CDS gidA NC_012695.1 3982758 3984731 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(3982758..3984731) Burkholderia pseudomallei MSHR346 7888626 YP_002898810.1 CDS GBP346_A4157 NC_012695.1 3984893 3985648 R identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein complement(3984893..3985648) Burkholderia pseudomallei MSHR346 7890811 YP_002898811.1 CDS GBP346_A4158 NC_012695.1 3985651 3987435 R identified by match to protein family HMM PF00005; match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter complement(3985651..3987435) Burkholderia pseudomallei MSHR346 7890574 YP_002898812.1 CDS GBP346_A4159 NC_012695.1 3987440 3988495 R identified by match to protein family HMM PF02653; putative amino acid uptake ABC transporter, permease protein complement(3987440..3988495) Burkholderia pseudomallei MSHR346 7890157 YP_002898813.1 CDS GBP346_A4160 NC_012695.1 3988808 3989965 R identified by match to protein family HMM PF01094; branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein complement(3988808..3989965) Burkholderia pseudomallei MSHR346 7890279 YP_002898814.1 CDS GBP346_A4161 NC_012695.1 3990233 3991639 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(3990233..3991639) Burkholderia pseudomallei MSHR346 7890792 YP_002898815.1 CDS GBP346_A4162 NC_012695.1 3991618 3991734 R identified by glimmer; putative; hypothetical protein complement(3991618..3991734) Burkholderia pseudomallei MSHR346 7887920 YP_002898816.1 CDS GBP346_A4163 NC_012695.1 3991805 3991921 R identified by glimmer; putative; hypothetical protein complement(3991805..3991921) Burkholderia pseudomallei MSHR346 7887250 YP_002898817.1 CDS GBP346_A4164 NC_012695.1 3991953 3992459 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; branched-chain amino acid ABC transporter, permease protein complement(3991953..3992459) Burkholderia pseudomallei MSHR346 7889781 YP_002898818.1 CDS GBP346_A4165 NC_012695.1 3992447 3992926 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; branched-chain amino acid ABC transporter, permease protein complement(3992447..3992926) Burkholderia pseudomallei MSHR346 7887942 YP_002898819.1 CDS GBP346_A4166 NC_012695.1 3992926 3993810 R identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter, permease protein complement(3992926..3993810) Burkholderia pseudomallei MSHR346 7888380 YP_002898820.1 CDS GBP346_A4167 NC_012695.1 3993831 3993953 R hypothetical protein complement(3993831..3993953) Burkholderia pseudomallei MSHR346 7887730 YP_002898821.1 CDS GBP346_A4168 NC_012695.1 3993950 3995146 R branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein complement(3993950..3995146) Burkholderia pseudomallei MSHR346 7887898 YP_002898822.1 CDS GBP346_A4169 NC_012695.1 3995214 3995969 R identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein complement(3995214..3995969) Burkholderia pseudomallei MSHR346 7890612 YP_002898823.1 CDS GBP346_A4170 NC_012695.1 3995966 3996745 R identified by match to protein family HMM PF00005; ABC transporter, hydrophobic amino acid uptake transporter complement(3995966..3996745) Burkholderia pseudomallei MSHR346 7888728 YP_002898824.1 CDS GBP346_A4171 NC_012695.1 3996896 3997063 D hypothetical protein 3996896..3997063 Burkholderia pseudomallei MSHR346 7888557 YP_002898825.1 CDS GBP346_A4172 NC_012695.1 3997245 3998930 R identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase, (CHD)(CDH) complement(3997245..3998930) Burkholderia pseudomallei MSHR346 7890724 YP_002898826.1 CDS GBP346_A4174 NC_012695.1 3998954 3999127 D hypothetical protein 3998954..3999127 Burkholderia pseudomallei MSHR346 7888400 YP_002898827.1 CDS mmsA_1 NC_012695.1 3999105 4000631 R identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase (acylating) complement(3999105..4000631) Burkholderia pseudomallei MSHR346 7888760 YP_002898828.1 CDS GBP346_A4175 NC_012695.1 4000614 4000730 D hypothetical protein 4000614..4000730 Burkholderia pseudomallei MSHR346 7887948 YP_002898829.1 CDS GBP346_A4176 NC_012695.1 4000772 4001671 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 4000772..4001671 Burkholderia pseudomallei MSHR346 7887425 YP_002898830.1 CDS GBP346_A4177 NC_012695.1 4002064 4002594 D identified by match to protein family HMM PF01928; adenylate cyclase 4002064..4002594 Burkholderia pseudomallei MSHR346 7890728 YP_002898831.1 CDS GBP346_A4178 NC_012695.1 4002695 4003186 R identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family complement(4002695..4003186) Burkholderia pseudomallei MSHR346 7888968 YP_002898832.1 CDS phhA NC_012695.1 4003330 4004223 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 4003330..4004223 Burkholderia pseudomallei MSHR346 7889125 YP_002898833.1 CDS phhB NC_012695.1 4004220 4004612 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4004220..4004612 Burkholderia pseudomallei MSHR346 7886811 YP_002898834.1 CDS GBP346_A4181 NC_012695.1 4004695 4005048 R hypothetical protein complement(4004695..4005048) Burkholderia pseudomallei MSHR346 7890813 YP_002898835.1 CDS GBP346_A4182 NC_012695.1 4005047 4005739 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 4005047..4005739 Burkholderia pseudomallei MSHR346 7890899 YP_002898836.1 CDS GBP346_A4183 NC_012695.1 4005864 4007330 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08521; sensor histidine kinase 4005864..4007330 Burkholderia pseudomallei MSHR346 7887677 YP_002898837.1 CDS GBP346_A4184 NC_012695.1 4007772 4008335 R identified by match to protein family HMM PF00856; SET domain protein complement(4007772..4008335) Burkholderia pseudomallei MSHR346 7889372 YP_002898838.1 CDS GBP346_A4185 NC_012695.1 4008594 4009706 R identified by match to protein family HMM PF00724; oxidoreductase, FAD/FMN-binding complement(4008594..4009706) Burkholderia pseudomallei MSHR346 7887629 YP_002898839.1 CDS GBP346_A4186 NC_012695.1 4009944 4010654 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(4009944..4010654) Burkholderia pseudomallei MSHR346 7890841 YP_002898840.1 CDS GBP346_A4187 NC_012695.1 4010694 4011506 R identified by match to protein family HMM PF01022; match to protein family HMM PF01047; transcriptional regulator, MarR family complement(4010694..4011506) Burkholderia pseudomallei MSHR346 7886775 YP_002898841.1 CDS GBP346_A4188 NC_012695.1 4011288 4011551 D putative dehydrogenase 4011288..4011551 Burkholderia pseudomallei MSHR346 7888875 YP_002898842.1 CDS GBP346_A4189 NC_012695.1 4011849 4012964 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(4011849..4012964) Burkholderia pseudomallei MSHR346 7888472 YP_002898843.1 CDS GBP346_A4190 NC_012695.1 4013009 4014223 R identified by match to protein family HMM PF00999; hypothetical protein complement(4013009..4014223) Burkholderia pseudomallei MSHR346 7886929 YP_002898844.1 CDS mnmC NC_012695.1 4014962 4016944 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(4014962..4016944) Burkholderia pseudomallei MSHR346 7890921 YP_002898845.1 CDS GBP346_A4192 NC_012695.1 4016943 4017101 D identified by glimmer; putative; hypothetical protein 4016943..4017101 Burkholderia pseudomallei MSHR346 7890238 YP_002898846.1 CDS GBP346_A4193 NC_012695.1 4017336 4017614 D identified by match to protein family HMM PF00216; DNA-binding protein HU-beta 4017336..4017614 Burkholderia pseudomallei MSHR346 7889827 YP_002898847.1 CDS GBP346_A4194 NC_012695.1 4017716 4019062 R identified by match to protein family HMM PF02492; match to protein family HMM PF07683; CobW/P47K family protein complement(4017716..4019062) Burkholderia pseudomallei MSHR346 7888249 YP_002898848.1 CDS GBP346_A4195 NC_012695.1 4019381 4019866 R identified by match to protein family HMM PF01464; BapC protein complement(4019381..4019866) Burkholderia pseudomallei MSHR346 7889461 YP_002898849.1 CDS GBP346_A4196 NC_012695.1 4020022 4020174 D identified by glimmer; putative; hypothetical protein 4020022..4020174 Burkholderia pseudomallei MSHR346 7888799 YP_002898850.1 CDS gspD NC_012695.1 4020248 4022521 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02517; general secretion pathway protein D 4020248..4022521 Burkholderia pseudomallei MSHR346 7887380 YP_002898851.1 CDS gspE NC_012695.1 4022518 4024011 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00437; match to protein family HMM TIGR02533; general secretory pathway protein E 4022518..4024011 Burkholderia pseudomallei MSHR346 7889488 YP_002898852.1 CDS gspF NC_012695.1 4024016 4025233 D identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120; general secretion pathway protein F 4024016..4025233 Burkholderia pseudomallei MSHR346 7889902 YP_002898853.1 CDS GBP346_A4200 NC_012695.1 4025293 4025703 R general secretion pathway protein C complement(4025293..4025703) Burkholderia pseudomallei MSHR346 7888359 YP_002898854.1 CDS GBP346_A4201 NC_012695.1 4025702 4025833 D hypothetical protein 4025702..4025833 Burkholderia pseudomallei MSHR346 7890648 YP_002898855.1 CDS gspG NC_012695.1 4025851 4026303 D identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532; general secretion pathway protein G 4025851..4026303 Burkholderia pseudomallei MSHR346 7886997 YP_002898856.1 CDS gspH NC_012695.1 4026338 4026937 D identified by match to protein family HMM PF07963; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532; general secretion pathway protein H 4026338..4026937 Burkholderia pseudomallei MSHR346 7890920 YP_002898857.1 CDS gspI NC_012695.1 4026934 4027344 D identified by match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01707; match to protein family HMM TIGR02532; general secretion pathway protein I 4026934..4027344 Burkholderia pseudomallei MSHR346 7889618 YP_002898858.1 CDS GBP346_A4205 NC_012695.1 4027322 4028050 D identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; general secretory pathway protein J 4027322..4028050 Burkholderia pseudomallei MSHR346 7887471 YP_002898859.1 CDS gspK NC_012695.1 4028052 4029302 D identified by match to protein family HMM PF03934; general secretion pathway protein K 4028052..4029302 Burkholderia pseudomallei MSHR346 7890036 YP_002898860.1 CDS gspL NC_012695.1 4029348 4030757 D identified by match to protein family HMM PF05134; match to protein family HMM TIGR01709; general secretion pathway protein L 4029348..4030757 Burkholderia pseudomallei MSHR346 7890775 YP_002898861.1 CDS GBP346_A4208 NC_012695.1 4030754 4031260 D identified by match to protein family HMM PF04612; general secretory pathway protein M 4030754..4031260 Burkholderia pseudomallei MSHR346 7886927 YP_002898862.1 CDS GBP346_A4209 NC_012695.1 4031299 4032090 D general secretory pathway protein N 4031299..4032090 Burkholderia pseudomallei MSHR346 7887978 YP_002898863.1 CDS GBP346_A4210 NC_012695.1 4032342 4033958 R outer membrane efflux lipoprotein complement(4032342..4033958) Burkholderia pseudomallei MSHR346 7890739 YP_002898864.1 CDS GBP346_A4211 NC_012695.1 4034180 4034452 R hypothetical protein complement(4034180..4034452) Burkholderia pseudomallei MSHR346 7889794 YP_002898865.1 CDS GBP346_A4212 NC_012695.1 4034645 4035142 D identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 4034645..4035142 Burkholderia pseudomallei MSHR346 7886907 YP_002898866.1 CDS GBP346_A4213 NC_012695.1 4035290 4036852 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; multidrug resistance protein Y 4035290..4036852 Burkholderia pseudomallei MSHR346 7888153 YP_002898867.1 CDS GBP346_A4214 NC_012695.1 4036912 4037835 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family complement(4036912..4037835) Burkholderia pseudomallei MSHR346 7887004 YP_002898868.1 CDS GBP346_A4215 NC_012695.1 4038038 4038445 D identified by match to protein family HMM PF03788; LrgA family protein 4038038..4038445 Burkholderia pseudomallei MSHR346 7890151 YP_002898869.1 CDS GBP346_A4216 NC_012695.1 4038514 4039236 D identified by match to protein family HMM PF04172; LrgB family protein 4038514..4039236 Burkholderia pseudomallei MSHR346 7890026 YP_002898870.1 CDS GBP346_A4217 NC_012695.1 4039287 4039466 R identified by glimmer; putative; hypothetical protein complement(4039287..4039466) Burkholderia pseudomallei MSHR346 7890870 YP_002898871.1 CDS GBP346_A4218 NC_012695.1 4039735 4039974 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(4039735..4039974) Burkholderia pseudomallei MSHR346 7887654 YP_002898872.1 CDS fliL NC_012695.1 4040075 4040572 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 4040075..4040572 Burkholderia pseudomallei MSHR346 7888847 YP_002898873.1 CDS fliM NC_012695.1 4040595 4041593 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 4040595..4041593 Burkholderia pseudomallei MSHR346 7887321 YP_002898874.1 CDS fliN NC_012695.1 4041586 4042083 D identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480; flagellar motor switch protein FliN 4041586..4042083 Burkholderia pseudomallei MSHR346 7886771 YP_002898875.1 CDS GBP346_A4222 NC_012695.1 4042080 4042745 D identified by match to protein family HMM PF04347; match to protein family HMM TIGR03500; flagellar protein FliO 4042080..4042745 Burkholderia pseudomallei MSHR346 7890249 YP_002898876.1 CDS fliP NC_012695.1 4042747 4043577 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4042747..4043577 Burkholderia pseudomallei MSHR346 7890289 YP_002898877.1 CDS fliQ NC_012695.1 4043603 4043875 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 4043603..4043875 Burkholderia pseudomallei MSHR346 7888915 YP_002898878.1 CDS fliR NC_012695.1 4043994 4044776 D identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400; flagellar biosynthetic protein FliR 4043994..4044776 Burkholderia pseudomallei MSHR346 7888562 YP_002898879.1 CDS GBP346_A4226 NC_012695.1 4045133 4045561 R identified by match to protein family HMM PF00376; match to protein family HMM PF09278; transcriptional regulator, MerR family complement(4045133..4045561) Burkholderia pseudomallei MSHR346 7889951 YP_002898880.1 CDS GBP346_A4227 NC_012695.1 4045643 4046518 D identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 4045643..4046518 Burkholderia pseudomallei MSHR346 7888414 YP_002898881.1 CDS GBP346_A4228 NC_012695.1 4046485 4047024 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 4046485..4047024 Burkholderia pseudomallei MSHR346 7887652 YP_002898882.1 CDS GBP346_A4229 NC_012695.1 4047182 4048195 D identified by match to protein family HMM PF09084; ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 4047182..4048195 Burkholderia pseudomallei MSHR346 7890560 YP_002898883.1 CDS GBP346_A4230 NC_012695.1 4048279 4049076 D identified by match to protein family HMM PF00005; alkyl sulfate ester ABC transporter AstC, ATP-binding protein 4048279..4049076 Burkholderia pseudomallei MSHR346 7886842 YP_002898884.1 CDS GBP346_A4231 NC_012695.1 4049104 4049952 D identified by match to protein family HMM PF00528; ABC transporter, permease protein 4049104..4049952 Burkholderia pseudomallei MSHR346 7888146 YP_002898885.1 CDS GBP346_A4232 NC_012695.1 4050030 4051409 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08521; sensor histidine kinase 4050030..4051409 Burkholderia pseudomallei MSHR346 7889111 YP_002898886.1 CDS GBP346_A4233 NC_012695.1 4051420 4052097 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator TctD 4051420..4052097 Burkholderia pseudomallei MSHR346 7886998 YP_002898887.1 CDS GBP346_A4235 NC_012695.1 4052327 4053547 D outer membrane porin lipoprotein 4052327..4053547 Burkholderia pseudomallei MSHR346 7890138 YP_002898888.1 CDS GBP346_A4234 NC_012695.1 4053508 4053858 R identified by glimmer; putative; hypothetical protein complement(4053508..4053858) Burkholderia pseudomallei MSHR346 7887946 YP_002898889.1 CDS GBP346_A4236 NC_012695.1 4053999 4056014 D identified by match to protein family HMM PF01555; type III DNA modification methyltransferase 4053999..4056014 Burkholderia pseudomallei MSHR346 7890080 YP_002898890.1 CDS GBP346_A4237 NC_012695.1 4056055 4059084 D identified by match to protein family HMM PF04851; type III restriction protein res subunit 4056055..4059084 Burkholderia pseudomallei MSHR346 7889069 YP_002898891.1 CDS GBP346_A4238 NC_012695.1 4059325 4059477 D hypothetical protein 4059325..4059477 Burkholderia pseudomallei MSHR346 7889544 YP_002898892.1 CDS GBP346_A4239 NC_012695.1 4059622 4060722 D outer membrane porin OpcP 4059622..4060722 Burkholderia pseudomallei MSHR346 7886732 YP_002898893.1 CDS GBP346_A4240 NC_012695.1 4061122 4062081 D identified by match to protein family HMM PF00165; AraC family regulatory protein 4061122..4062081 Burkholderia pseudomallei MSHR346 7888552 YP_002898894.1 CDS GBP346_A4241 NC_012695.1 4062204 4062935 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(4062204..4062935) Burkholderia pseudomallei MSHR346 7888072 YP_002898895.1 CDS GBP346_A4242 NC_012695.1 4062920 4063318 R DNA-binding response regulator, LuxR family complement(4062920..4063318) Burkholderia pseudomallei MSHR346 7887171 YP_002898896.1 CDS GBP346_A4243 NC_012695.1 4063308 4064030 R identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein complement(4063308..4064030) Burkholderia pseudomallei MSHR346 7890277 YP_002898897.1 CDS GBP346_A4244 NC_012695.1 4064027 4065076 R identified by match to protein family HMM PF02653; ABC transporter, permease protein complement(4064027..4065076) Burkholderia pseudomallei MSHR346 7888209 YP_002898898.1 CDS GBP346_A4245 NC_012695.1 4065073 4065951 R identified by match to protein family HMM PF02653; ABC transporter, permease protein complement(4065073..4065951) Burkholderia pseudomallei MSHR346 7889446 YP_002898899.1 CDS GBP346_A4246 NC_012695.1 4065956 4067215 R hypothetical protein complement(4065956..4067215) Burkholderia pseudomallei MSHR346 7888368 YP_002898900.1 CDS GBP346_A4247 NC_012695.1 4067432 4068937 R identified by match to protein family HMM PF00171; phenylacetaldehyde dehydrogenase (PAD) complement(4067432..4068937) Burkholderia pseudomallei MSHR346 7888723 YP_002898901.1 CDS GBP346_A4248 NC_012695.1 4068993 4069385 R hypothetical protein complement(4068993..4069385) Burkholderia pseudomallei MSHR346 7887391 YP_002898902.1 CDS GBP346_A4249 NC_012695.1 4069396 4070205 R hypothetical protein complement(4069396..4070205) Burkholderia pseudomallei MSHR346 7889522 YP_002898903.1 CDS GBP346_A4250 NC_012695.1 4070251 4071048 R identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short-chain dehydrogenase/reductase family complement(4070251..4071048) Burkholderia pseudomallei MSHR346 7887761 YP_002898904.1 CDS GBP346_A4251 NC_012695.1 4071133 4072803 R identified by match to protein family HMM PF00732; match to protein family HMM PF05199; alcohol dehydrogenase (acceptor) complement(4071133..4072803) Burkholderia pseudomallei MSHR346 7890366 YP_002898905.1 CDS GBP346_A4252 NC_012695.1 4073528 4073869 D identified by match to protein family HMM PF03551; transcriptional regulator, PadR family 4073528..4073869 Burkholderia pseudomallei MSHR346 7889122 YP_002898906.1 CDS GBP346_A4253 NC_012695.1 4073866 4075053 D hypothetical protein 4073866..4075053 Burkholderia pseudomallei MSHR346 7887547 YP_002898907.1 CDS GBP346_A4254 NC_012695.1 4075219 4075338 R hypothetical protein complement(4075219..4075338) Burkholderia pseudomallei MSHR346 7890439 YP_002898908.1 CDS GBP346_A4255 NC_012695.1 4075397 4075702 R hypothetical protein complement(4075397..4075702) Burkholderia pseudomallei MSHR346 7890928 YP_002898909.1 CDS GBP346_A4256 NC_012695.1 4075726 4076712 R identified by match to protein family HMM PF00487; stearoyl-CoA 9-desaturase complement(4075726..4076712) Burkholderia pseudomallei MSHR346 7887704 YP_002898910.1 CDS GBP346_A4257 NC_012695.1 4076742 4077578 R identified by match to protein family HMM PF07848; match to protein family HMM PF08223; PaaX domain protein, C- domain protein complement(4076742..4077578) Burkholderia pseudomallei MSHR346 7887694 YP_002898911.1 CDS GBP346_A4258 NC_012695.1 4078038 4079225 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00165; transcriptional regulator, AraC family complement(4078038..4079225) Burkholderia pseudomallei MSHR346 7888985 YP_002898912.1 CDS GBP346_A4259 NC_012695.1 4079224 4080360 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-coa dehydrogenase, (lcad) 4079224..4080360 Burkholderia pseudomallei MSHR346 7888103 YP_002898913.1 CDS GBP346_A4260 NC_012695.1 4080408 4080992 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(4080408..4080992) Burkholderia pseudomallei MSHR346 7888049 YP_002898914.1 CDS GBP346_A4261 NC_012695.1 4081011 4082216 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4081011..4082216 Burkholderia pseudomallei MSHR346 7887823 YP_002898915.1 CDS GBP346_A4262 NC_012695.1 4082229 4084352 D identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; fatty oxidation complex, alpha subunit 4082229..4084352 Burkholderia pseudomallei MSHR346 7887539 YP_002898916.1 CDS GBP346_A4263 NC_012695.1 4084724 4085857 D identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase (2-methylacyl-CoAracemase) 4084724..4085857 Burkholderia pseudomallei MSHR346 7889933 YP_002898917.1 CDS GBP346_A4264 NC_012695.1 4085934 4086500 R putative lipoprotein complement(4085934..4086500) Burkholderia pseudomallei MSHR346 7889001 YP_002898918.1 CDS GBP346_A4265 NC_012695.1 4086693 4086815 D hypothetical protein 4086693..4086815 Burkholderia pseudomallei MSHR346 7889116 YP_002898919.1 CDS GBP346_A4266 NC_012695.1 4086827 4087282 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative lipoprotein complement(4086827..4087282) Burkholderia pseudomallei MSHR346 7887309 YP_002898920.1 CDS GBP346_A4267 NC_012695.1 4087321 4088286 D hypothetical protein 4087321..4088286 Burkholderia pseudomallei MSHR346 7888855 YP_002898921.1 CDS GBP346_A4268 NC_012695.1 4088273 4088641 D putative lipoprotein 4088273..4088641 Burkholderia pseudomallei MSHR346 7887603 YP_002898922.1 CDS GBP346_A4269 NC_012695.1 4088703 4088906 D identified by glimmer; putative; hypothetical protein 4088703..4088906 Burkholderia pseudomallei MSHR346 7889019 YP_002898923.1 CDS GBP346_A4270 NC_012695.1 4089004 4089282 R hypothetical protein complement(4089004..4089282) Burkholderia pseudomallei MSHR346 7889023 YP_002898924.1 CDS GBP346_A4271 NC_012695.1 4089309 4090067 R transmembrane regulator PrtR complement(4089309..4090067) Burkholderia pseudomallei MSHR346 7889326 YP_002898925.1 CDS GBP346_A4272 NC_012695.1 4090064 4090579 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF sigma factor PrtI complement(4090064..4090579) Burkholderia pseudomallei MSHR346 7888130 YP_002898926.1 CDS GBP346_A4273 NC_012695.1 4090599 4090721 D identified by glimmer; putative; hypothetical protein 4090599..4090721 Burkholderia pseudomallei MSHR346 7890322 YP_002898927.1 CDS GBP346_A4274 NC_012695.1 4090740 4091825 D identified by match to protein family HMM PF00199; catalase 4090740..4091825 Burkholderia pseudomallei MSHR346 7889321 YP_002898928.1 CDS GBP346_A4275 NC_012695.1 4091822 4092349 D identified by match to protein family HMM PF01292; cytochrome B561 4091822..4092349 Burkholderia pseudomallei MSHR346 7889868 YP_002898929.1 CDS gyrB NC_012695.1 4093216 4095684 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(4093216..4095684) Burkholderia pseudomallei MSHR346 7889853 YP_002898930.1 CDS dnaN NC_012695.1 4095873 4096976 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(4095873..4096976) Burkholderia pseudomallei MSHR346 7890826 YP_002898931.1 CDS dnaA NC_012695.1 4097137 4098516 R identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA complement(4097137..4098516) Burkholderia pseudomallei MSHR346 7890470 GBP346_A0051 tRNA GBP346_A0051 NC_012695.1 42603 42680 R tRNA-Lys complement(42603..42680) Burkholderia pseudomallei MSHR346 7887377 GBP346_A0071 tRNA GBP346_A0071 NC_012695.1 60556 60633 D tRNA-Phe 60556..60633 Burkholderia pseudomallei MSHR346 7890334 GBP346_A0497 tRNA GBP346_A0497 NC_012695.1 453566 453644 R tRNA-Gln complement(453566..453644) Burkholderia pseudomallei MSHR346 7887090 GBP346_A0731 tRNA GBP346_A0731 NC_012695.1 694141 694219 R tRNA-Met complement(694141..694219) Burkholderia pseudomallei MSHR346 7889383 GBP346_A1153 tRNA GBP346_A1153 NC_012695.1 1110296 1110370 R tRNA-Arg complement(1110296..1110370) Burkholderia pseudomallei MSHR346 7887306 GBP346_A1313 tRNA GBP346_A1313 NC_012695.1 1265500 1265586 D tRNA-Leu 1265500..1265586 Burkholderia pseudomallei MSHR346 7888763 GBP346_A1354 tRNA GBP346_A1354 NC_012695.1 1302316 1302392 D tRNA-Ile 1302316..1302392 Burkholderia pseudomallei MSHR346 7889163 GBP346_A1355 tRNA GBP346_A1355 NC_012695.1 1302426 1302503 D tRNA-Ala 1302426..1302503 Burkholderia pseudomallei MSHR346 7889174 GBP346_A1537 tRNA GBP346_A1537 NC_012695.1 1473276 1473354 R tRNA-Pro complement(1473276..1473354) Burkholderia pseudomallei MSHR346 7886712 GBP346_A1551 tRNA GBP346_A1551 NC_012695.1 1483574 1483650 D tRNA-Arg 1483574..1483650 Burkholderia pseudomallei MSHR346 7890753 GBP346_A1755 tRNA GBP346_A1755 NC_012695.1 1703685 1703761 D tRNA-Val 1703685..1703761 Burkholderia pseudomallei MSHR346 7887771 GBP346_A1767 tRNA GBP346_A1767 NC_012695.1 1716218 1716296 R tRNA-Pro complement(1716218..1716296) Burkholderia pseudomallei MSHR346 7888710 GBP346_A1836 tRNA GBP346_A1836 NC_012695.1 1787326 1787414 R tRNA-Leu complement(1787326..1787414) Burkholderia pseudomallei MSHR346 7886786 GBP346_A1837 tRNA GBP346_A1837 NC_012695.1 1787570 1787658 R tRNA-Leu complement(1787570..1787658) Burkholderia pseudomallei MSHR346 7889208 GBP346_A1852 tRNA GBP346_A1852 NC_012695.1 1801360 1801436 R tRNA-Met complement(1801360..1801436) Burkholderia pseudomallei MSHR346 7887060 GBP346_A1865 tRNA GBP346_A1865 NC_012695.1 1809708 1809785 R tRNA-His complement(1809708..1809785) Burkholderia pseudomallei MSHR346 7889624 GBP346_A2422 tRNA GBP346_A2422 NC_012695.1 2377747 2377823 R tRNA-Asp complement(2377747..2377823) Burkholderia pseudomallei MSHR346 7887994 GBP346_A2430 tRNA GBP346_A2430 NC_012695.1 2381297 2381372 R tRNA-Val complement(2381297..2381372) Burkholderia pseudomallei MSHR346 7888563 GBP346_A2459 tRNA GBP346_A2459 NC_012695.1 2404026 2404114 R tRNA-Leu complement(2404026..2404114) Burkholderia pseudomallei MSHR346 7887964 GBP346_A2604 tRNA GBP346_A2604 NC_012695.1 2540835 2540913 R tRNA-Asp complement(2540835..2540913) Burkholderia pseudomallei MSHR346 7886840 GBP346_A2605 tRNA GBP346_A2605 NC_012695.1 2540993 2541070 R tRNA-Glu complement(2540993..2541070) Burkholderia pseudomallei MSHR346 7889187 GBP346_A2606 tRNA GBP346_A2606 NC_012695.1 2541133 2541211 R tRNA-Asp complement(2541133..2541211) Burkholderia pseudomallei MSHR346 7889170 GBP346_A2607 tRNA GBP346_A2607 NC_012695.1 2541287 2541364 R tRNA-Glu complement(2541287..2541364) Burkholderia pseudomallei MSHR346 7889172 GBP346_A2608 tRNA GBP346_A2608 NC_012695.1 2541514 2541589 R tRNA-Ala complement(2541514..2541589) Burkholderia pseudomallei MSHR346 7889212 GBP346_A2660 tRNA GBP346_A2660 NC_012695.1 2604791 2604884 R tRNA-Ser complement(2604791..2604884) Burkholderia pseudomallei MSHR346 7886694 GBP346_A2801 tRNA GBP346_A2801 NC_012695.1 2732032 2732108 R tRNA-Met complement(2732032..2732108) Burkholderia pseudomallei MSHR346 7889679 GBP346_A2831 tRNA GBP346_A2831 NC_012695.1 2767759 2767835 D tRNA-Val 2767759..2767835 Burkholderia pseudomallei MSHR346 7888221 GBP346_A2945 tRNA GBP346_A2945 NC_012695.1 2871432 2871505 R tRNA-Cys complement(2871432..2871505) Burkholderia pseudomallei MSHR346 7889265 GBP346_A2946 tRNA GBP346_A2946 NC_012695.1 2871620 2871695 R tRNA-Gly complement(2871620..2871695) Burkholderia pseudomallei MSHR346 7889169 GBP346_A2947 tRNA GBP346_A2947 NC_012695.1 2871755 2871830 R tRNA-Gly complement(2871755..2871830) Burkholderia pseudomallei MSHR346 7889184 GBP346_A2997 tRNA GBP346_A2997 NC_012695.1 2918785 2918862 D tRNA-Asn 2918785..2918862 Burkholderia pseudomallei MSHR346 7890797 GBP346_A2998 tRNA GBP346_A2998 NC_012695.1 2918950 2919027 D tRNA-Asn 2918950..2919027 Burkholderia pseudomallei MSHR346 7889171 GBP346_A3130 tRNA GBP346_A3130 NC_012695.1 3037869 3037946 D tRNA-Thr 3037869..3037946 Burkholderia pseudomallei MSHR346 7890293 GBP346_A3149 tRNA GBP346_A3149 NC_012695.1 3051477 3051555 D tRNA-Arg 3051477..3051555 Burkholderia pseudomallei MSHR346 7888068 GBP346_A3150 tRNA GBP346_A3150 NC_012695.1 3051613 3051691 D tRNA-Arg 3051613..3051691 Burkholderia pseudomallei MSHR346 7889209 GBP346_A3158 tRNA GBP346_A3158 NC_012695.1 3059070 3059159 D tRNA-Ser 3059070..3059159 Burkholderia pseudomallei MSHR346 7887307 GBP346_A3176 tRNA GBP346_A3176 NC_012695.1 3071137 3071227 R tRNA-Ser complement(3071137..3071227) Burkholderia pseudomallei MSHR346 7889960 GBP346_A3235 tRNA GBP346_A3235 NC_012695.1 3125679 3125753 D tRNA-Gly 3125679..3125753 Burkholderia pseudomallei MSHR346 7887811 GBP346_A3384 tRNA GBP346_A3384 NC_012695.1 3264493 3264570 D tRNA-Lys 3264493..3264570 Burkholderia pseudomallei MSHR346 7888978 GBP346_A3677 tRNA GBP346_A3677 NC_012695.1 3545235 3545313 D tRNA-Pro 3545235..3545313 Burkholderia pseudomallei MSHR346 7888012 GBP346_A3714 tRNA GBP346_A3714 NC_012695.1 3589123 3589200 R tRNA-Ala complement(3589123..3589200) Burkholderia pseudomallei MSHR346 7887084 GBP346_A3715 tRNA GBP346_A3715 NC_012695.1 3589234 3589310 R tRNA-Ile complement(3589234..3589310) Burkholderia pseudomallei MSHR346 7889185 GBP346_A3829 tRNA GBP346_A3829 NC_012695.1 3687635 3687710 R tRNA-Thr complement(3687635..3687710) Burkholderia pseudomallei MSHR346 7889533 GBP346_A3949 tRNA GBP346_A3949 NC_012695.1 3792499 3792576 R tRNA-Trp complement(3792499..3792576) Burkholderia pseudomallei MSHR346 7886887 GBP346_A3951 tRNA GBP346_A3951 NC_012695.1 3793888 3793962 R tRNA-Thr complement(3793888..3793962) Burkholderia pseudomallei MSHR346 7890145 GBP346_A3952 tRNA GBP346_A3952 NC_012695.1 3793987 3794060 R tRNA-Gly complement(3793987..3794060) Burkholderia pseudomallei MSHR346 7889175 GBP346_A3953 tRNA GBP346_A3953 NC_012695.1 3794104 3794189 R tRNA-Tyr complement(3794104..3794189) Burkholderia pseudomallei MSHR346 7889213 GBP346_A3957 tRNA GBP346_A3957 NC_012695.1 3798541 3798618 R tRNA-Ala complement(3798541..3798618) Burkholderia pseudomallei MSHR346 7889164 GBP346_A3958 tRNA GBP346_A3958 NC_012695.1 3798652 3798728 R tRNA-Ile complement(3798652..3798728) Burkholderia pseudomallei MSHR346 7889177 GBP346_A4001 tRNA GBP346_A4001 NC_012695.1 3836913 3836988 R tRNA-Ala complement(3836913..3836988) Burkholderia pseudomallei MSHR346 7887061 GBP346_A4087 tRNA GBP346_A4087 NC_012695.1 3913110 3913185 R tRNA-Arg complement(3913110..3913185) Burkholderia pseudomallei MSHR346 7887067 GBP346_A1353 rRNA rrs_1 NC_012695.1 1300746 1302233 D 16S ribosomal RNA 1300746..1302233 Burkholderia pseudomallei MSHR346 7887541 GBP346_A4280 rRNA rrl_1 NC_012695.1 1302895 1305776 D 23S ribosomal RNA 1302895..1305776 Burkholderia pseudomallei MSHR346 7889194 GBP346_A1356 rRNA rrf_1 NC_012695.1 1305960 1306073 D 5S ribosomal RNA 1305960..1306073 Burkholderia pseudomallei MSHR346 7889161 GBP346_A3713 rRNA rrf_2 NC_012695.1 3585553 3585666 R 5S ribosomal RNA complement(3585553..3585666) Burkholderia pseudomallei MSHR346 7889755 GBP346_A4281 rRNA rrl_2 NC_012695.1 3585850 3588731 R 23S ribosomal RNA complement(3585850..3588731) Burkholderia pseudomallei MSHR346 7889160 GBP346_A3716 rRNA rrs_2 NC_012695.1 3589393 3590880 R 16S ribosomal RNA complement(3589393..3590880) Burkholderia pseudomallei MSHR346 7889178 GBP346_A3956 rRNA rrf_3 NC_012695.1 3794971 3795084 R 5S ribosomal RNA complement(3794971..3795084) Burkholderia pseudomallei MSHR346 7890154 GBP346_A4282 rRNA rrl_3 NC_012695.1 3795268 3798149 R 23S ribosomal RNA complement(3795268..3798149) Burkholderia pseudomallei MSHR346 7889165 GBP346_A3959 rRNA rrs_3 NC_012695.1 3798811 3800298 R 16S ribosomal RNA complement(3798811..3800298) Burkholderia pseudomallei MSHR346 7889216