-- dump date 20111121_010951 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002894730.1 237810279 7889218 complement(<1..162) 1 NC_012695.1 chromosomal replication initiator protein DnaA 162 7889218 GBP346_A0001 Burkholderia pseudomallei MSHR346 chromosomal replication initiator protein DnaA YP_002894730.1 <1 R 536230 CDS YP_002894731.1 237810280 7888819 608..742 1 NC_012695.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 742 rpmH 7888819 rpmH Burkholderia pseudomallei MSHR346 50S ribosomal protein L34 YP_002894731.1 608 D 536230 CDS YP_002894732.1 237810281 7889731 759..1226 1 NC_012695.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P 1226 7889731 GBP346_A0003 Burkholderia pseudomallei MSHR346 ribonuclease P YP_002894732.1 759 D 536230 CDS YP_002894733.1 237810282 7890348 1306..1575 1 NC_012695.1 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 1575 7890348 GBP346_A0004 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894733.1 1306 D 536230 CDS YP_002894734.1 237810283 7890678 1584..3260 1 NC_012695.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 3260 7890678 GBP346_A0005 Burkholderia pseudomallei MSHR346 putative inner membrane protein translocase component YidC YP_002894734.1 1584 D 536230 CDS YP_002894735.1 237810284 7890729 complement(3417..3878) 1 NC_012695.1 hypothetical protein 3878 7890729 GBP346_A0006 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894735.1 3417 R 536230 CDS YP_002894736.1 237810285 7889335 3708..3893 1 NC_012695.1 hypothetical protein 3893 7889335 GBP346_A0007 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894736.1 3708 D 536230 CDS YP_002894737.1 237810286 7887433 complement(4015..4149) 1 NC_012695.1 hypothetical protein 4149 7887433 GBP346_A0008 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894737.1 4015 R 536230 CDS YP_002894738.1 237810287 7888773 4174..5577 1 NC_012695.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 5577 trmE 7888773 trmE Burkholderia pseudomallei MSHR346 tRNA modification GTPase TrmE YP_002894738.1 4174 D 536230 CDS YP_002894739.1 237810288 7887885 5746..6975 1 NC_012695.1 identified by match to protein family HMM PF00589; integrase or site-specific recombinase 6975 7887885 GBP346_A0010 Burkholderia pseudomallei MSHR346 integrase or site-specific recombinase YP_002894739.1 5746 D 536230 CDS YP_002894740.1 237810289 7890398 complement(7624..10476) 1 NC_012695.1 identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family 10476 7890398 GBP346_A0011 Burkholderia pseudomallei MSHR346 primase C 2 (PriCT-2) family YP_002894740.1 7624 R 536230 CDS YP_002894741.1 237810290 7888113 complement(10616..10957) 1 NC_012695.1 hypothetical protein 10957 7888113 GBP346_A0012 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894741.1 10616 R 536230 CDS YP_002894742.1 237810291 7888042 complement(10954..11211) 1 NC_012695.1 hypothetical protein 11211 7888042 GBP346_A0013 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894742.1 10954 R 536230 CDS YP_002894743.1 237810292 7887529 complement(11204..11380) 1 NC_012695.1 hypothetical protein 11380 7887529 GBP346_A0014 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894743.1 11204 R 536230 CDS YP_002894744.1 237810293 7887496 complement(11748..12227) 1 NC_012695.1 hypothetical protein 12227 7887496 GBP346_A0015 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894744.1 11748 R 536230 CDS YP_002894745.1 237810294 7888661 complement(12227..12367) 1 NC_012695.1 phage transcriptional regulator, AlpA 12367 7888661 GBP346_A0016 Burkholderia pseudomallei MSHR346 phage transcriptional regulator, AlpA YP_002894745.1 12227 R 536230 CDS YP_002894746.1 237810295 7888136 complement(12620..13141) 1 NC_012695.1 hypothetical protein 13141 7888136 GBP346_A0017 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894746.1 12620 R 536230 CDS YP_002894747.1 237810296 7888335 complement(13549..14523) 1 NC_012695.1 hypothetical protein 14523 7888335 GBP346_A0018 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894747.1 13549 R 536230 CDS YP_002894748.1 237810297 7887869 14426..14539 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 14539 7887869 GBP346_A0019 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894748.1 14426 D 536230 CDS YP_002894749.1 237810298 7890400 complement(15586..15714) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 15714 7890400 GBP346_A0020 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894749.1 15586 R 536230 CDS YP_002894750.1 237810299 7889999 complement(15987..16127) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 16127 7889999 GBP346_A0021 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894750.1 15987 R 536230 CDS YP_002894751.1 237810300 7888654 16189..16644 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00239; resolvase, N domain protein 16644 7888654 GBP346_A0022 Burkholderia pseudomallei MSHR346 resolvase, N domain protein YP_002894751.1 16189 D 536230 CDS YP_002894752.1 237810301 7890389 complement(16791..16979) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 16979 7890389 GBP346_A0023 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894752.1 16791 R 536230 CDS YP_002894753.1 237810302 7887893 complement(17629..19329) 1 NC_012695.1 hypothetical protein 19329 7887893 GBP346_A0024 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894753.1 17629 R 536230 CDS YP_002894754.1 237810303 7888192 complement(20317..21051) 1 NC_012695.1 hypothetical protein 21051 7888192 GBP346_A0025 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894754.1 20317 R 536230 CDS YP_002894755.1 237810304 7886878 21617..22774 1 NC_012695.1 putative lipoprotein 22774 7886878 GBP346_A0026 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002894755.1 21617 D 536230 CDS YP_002894756.1 237810305 7890653 22837..22992 1 NC_012695.1 hypothetical protein 22992 7890653 GBP346_A0027 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894756.1 22837 D 536230 CDS YP_002894757.1 237810306 7888923 complement(23340..23510) 1 NC_012695.1 hypothetical protein 23510 7888923 GBP346_A0028 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894757.1 23340 R 536230 CDS YP_002894758.1 237810307 7890240 23672..24232 1 NC_012695.1 identified by match to protein family HMM PF00583; diamine N-acetyltransferase 24232 speG 7890240 speG Burkholderia pseudomallei MSHR346 diamine N-acetyltransferase YP_002894758.1 23672 D 536230 CDS YP_002894759.1 237810308 7888776 24244..24477 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 24477 7888776 GBP346_A0030 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894759.1 24244 D 536230 CDS YP_002894760.1 237810309 7890018 24719..25066 1 NC_012695.1 hypothetical protein 25066 7890018 GBP346_A0031 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894760.1 24719 D 536230 CDS YP_002894761.1 237810310 7888165 25282..25836 1 NC_012695.1 identified by match to protein family HMM PF07152; YaeQ protein 25836 7888165 GBP346_A0032 Burkholderia pseudomallei MSHR346 YaeQ protein YP_002894761.1 25282 D 536230 CDS YP_002894762.1 237810311 7886940 complement(26020..26436) 1 NC_012695.1 identified by match to protein family HMM PF00903; glyoxalase family protein 26436 7886940 GBP346_A0033 Burkholderia pseudomallei MSHR346 glyoxalase family protein YP_002894762.1 26020 R 536230 CDS YP_002894763.1 237810312 7888023 26838..27932 1 NC_012695.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM PF02870; match to protein family HMM TIGR00589; regulatory protein ada (Regulatory protein of adaptative response) 27932 7888023 GBP346_A0034 Burkholderia pseudomallei MSHR346 regulatory protein ada (Regulatory protein of adaptative response) YP_002894763.1 26838 D 536230 CDS YP_002894764.1 237810313 7890922 27929..28870 1 NC_012695.1 identified by match to protein family HMM PF00730; match to protein family HMM PF06029; DNA-3-methyladenine glycosylase 2 28870 alkA 7890922 alkA Burkholderia pseudomallei MSHR346 DNA-3-methyladenine glycosylase 2 YP_002894764.1 27929 D 536230 CDS YP_002894765.1 237810314 7890460 28871..29044 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 29044 7890460 GBP346_A0036 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894765.1 28871 D 536230 CDS YP_002894766.1 237810315 7889324 29083..30642 1 NC_012695.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 30642 gshA_1 7889324 gshA_1 Burkholderia pseudomallei MSHR346 glutamate--cysteine ligase YP_002894766.1 29083 D 536230 CDS YP_002894767.1 237810316 7887735 complement(30661..32109) 1 NC_012695.1 identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor 32109 7887735 GBP346_A0038 Burkholderia pseudomallei MSHR346 RNA polymerase sigma factor YP_002894767.1 30661 R 536230 CDS YP_002894768.1 237810317 7887134 complement(32372..32920) 1 NC_012695.1 hypothetical protein 32920 7887134 GBP346_A0039 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894768.1 32372 R 536230 CDS YP_002894769.1 237810318 7887544 complement(33009..33455) 1 NC_012695.1 hypothetical protein 33455 7887544 GBP346_A0040 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894769.1 33009 R 536230 CDS YP_002894770.1 237810319 7890150 complement(33499..34068) 1 NC_012695.1 hypothetical protein 34068 7890150 GBP346_A0041 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894770.1 33499 R 536230 CDS YP_002894771.1 237810320 7890284 complement(34171..35139) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcription regulatory protein 35139 7890284 GBP346_A0042 Burkholderia pseudomallei MSHR346 LysR family transcription regulatory protein YP_002894771.1 34171 R 536230 CDS YP_002894772.1 237810321 7890778 35213..36376 1 NC_012695.1 identified by match to protein family HMM PF01547; putrescine ABC transporter, periplasmic putrescine-binding protein 36376 potF_1 7890778 potF_1 Burkholderia pseudomallei MSHR346 putrescine ABC transporter, periplasmic putrescine-binding protein YP_002894772.1 35213 D 536230 CDS YP_002894773.1 237810322 7887283 36405..37517 1 NC_012695.1 identified by match to protein family HMM PF00850; histone deacetylase family protein 37517 7887283 GBP346_A0044 Burkholderia pseudomallei MSHR346 histone deacetylase family protein YP_002894773.1 36405 D 536230 CDS YP_002894774.1 237810323 7889507 37528..38403 1 NC_012695.1 identified by match to protein family HMM PF00795; match to protein family HMM TIGR03381; N-carbamoylputrescine amidase 38403 aguB 7889507 aguB Burkholderia pseudomallei MSHR346 N-carbamoylputrescine amidase YP_002894774.1 37528 D 536230 CDS YP_002894775.1 237810324 7890467 complement(38540..39004) 1 NC_012695.1 hypothetical protein 39004 7890467 GBP346_A0046 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894775.1 38540 R 536230 CDS YP_002894776.1 237810325 7889955 complement(38976..39533) 1 NC_012695.1 hypothetical protein 39533 7889955 GBP346_A0047 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894776.1 38976 R 536230 CDS YP_002894777.1 237810326 7889344 39403..40494 1 NC_012695.1 identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540; phage portal protein, pbsx family 40494 7889344 GBP346_A0048 Burkholderia pseudomallei MSHR346 phage portal protein, pbsx family YP_002894777.1 39403 D 536230 CDS YP_002894778.1 237810327 7889271 complement(40568..40852) 1 NC_012695.1 hypothetical protein 40852 7889271 GBP346_A0049 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894778.1 40568 R 536230 CDS YP_002894779.1 237810328 7887152 complement(40849..41331) 1 NC_012695.1 hypothetical protein 41331 7887152 GBP346_A0050 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894779.1 40849 R 536230 CDS YP_002894780.1 237810329 7889188 42699..42815 1 NC_012695.1 hypothetical protein 42815 7889188 GBP346_A0052 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894780.1 42699 D 536230 CDS YP_002894781.1 237810330 7888931 42871..43275 1 NC_012695.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 43275 7888931 GBP346_A0053 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002894781.1 42871 D 536230 CDS YP_002894782.1 237810331 7889498 43313..44182 1 NC_012695.1 identified by match to protein family HMM PF01734; patatin 44182 7889498 GBP346_A0054 Burkholderia pseudomallei MSHR346 patatin YP_002894782.1 43313 D 536230 CDS YP_002894783.1 237810332 7888828 complement(44305..45321) 1 NC_012695.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase 45321 7888828 GBP346_A0055 Burkholderia pseudomallei MSHR346 glyoxylate reductase YP_002894783.1 44305 R 536230 CDS YP_002894784.1 237810333 7889844 45760..46815 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 46815 7889844 GBP346_A0056 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002894784.1 45760 D 536230 CDS YP_002894785.1 237810334 7888902 complement(47037..49646) 1 NC_012695.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 49646 7888902 GBP346_A0057 Burkholderia pseudomallei MSHR346 DNA topoisomerase III YP_002894785.1 47037 R 536230 CDS YP_002894786.1 237810335 7890710 complement(49857..50228) 1 NC_012695.1 identified by match to protein family HMM PF00085; thioredoxin domain protein 50228 7890710 GBP346_A0058 Burkholderia pseudomallei MSHR346 thioredoxin domain protein YP_002894786.1 49857 R 536230 CDS YP_002894787.1 237810336 7890314 complement(50288..51592) 1 NC_012695.1 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA 51592 7890314 GBP346_A0059 Burkholderia pseudomallei MSHR346 DNA protecting protein DprA YP_002894787.1 50288 R 536230 CDS YP_002894788.1 237810337 7890484 complement(51589..51708) 1 NC_012695.1 hypothetical protein 51708 7890484 GBP346_A0060 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894788.1 51589 R 536230 CDS YP_002894789.1 237810338 7889443 51671..52210 1 NC_012695.1 identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 52210 def_1 7889443 def_1 Burkholderia pseudomallei MSHR346 peptide deformylase YP_002894789.1 51671 D 536230 CDS YP_002894790.1 237810339 7887812 52242..53225 1 NC_012695.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 53225 fmt 7887812 fmt Burkholderia pseudomallei MSHR346 methionyl-tRNA formyltransferase YP_002894790.1 52242 D 536230 CDS YP_002894791.1 237810340 7887070 complement(53241..53363) 1 NC_012695.1 hypothetical protein 53363 7887070 GBP346_A0063 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894791.1 53241 R 536230 CDS YP_002894792.1 237810341 7888226 53346..53981 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 53981 7888226 GBP346_A0064 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002894792.1 53346 D 536230 CDS YP_002894793.1 237810342 7887185 54091..54948 1 NC_012695.1 identified by match to protein family HMM PF01435; M48 family peptidase 54948 7887185 GBP346_A0065 Burkholderia pseudomallei MSHR346 M48 family peptidase YP_002894793.1 54091 D 536230 CDS YP_002894794.1 237810343 7887492 55113..55238 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; acetate permease 55238 7887492 GBP346_A0066 Burkholderia pseudomallei MSHR346 acetate permease YP_002894794.1 55113 D 536230 CDS YP_002894795.1 237810344 7888306 55406..56815 1 NC_012695.1 identified by match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B 56815 sun 7888306 sun Burkholderia pseudomallei MSHR346 ribosomal RNA small subunit methyltransferase B YP_002894795.1 55406 D 536230 CDS YP_002894796.1 237810345 7890875 56812..57402 1 NC_012695.1 hypothetical protein 57402 7890875 GBP346_A0068 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894796.1 56812 D 536230 CDS YP_002894797.1 237810346 7887050 57404..59812 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; PAS/PAC sensor signal transduction histidine kinase 59812 7887050 GBP346_A0069 Burkholderia pseudomallei MSHR346 PAS/PAC sensor signal transduction histidine kinase YP_002894797.1 57404 D 536230 CDS YP_002894798.1 237810347 7887025 59813..60496 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02954; putative nitrogen assimilation regulatory protein NtrX 60496 7887025 GBP346_A0070 Burkholderia pseudomallei MSHR346 putative nitrogen assimilation regulatory protein NtrX YP_002894798.1 59813 D 536230 CDS YP_002894799.1 237810348 7889193 60762..60983 1 NC_012695.1 hypothetical protein 60983 7889193 GBP346_A0072 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894799.1 60762 D 536230 CDS YP_002894800.1 237810349 7890385 60964..61698 1 NC_012695.1 identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; ExsB protein 61698 7890385 GBP346_A0073 Burkholderia pseudomallei MSHR346 ExsB protein YP_002894800.1 60964 D 536230 CDS YP_002894801.1 237810350 7888618 61792..62424 1 NC_012695.1 radical SAM domain protein 62424 7888618 GBP346_A0074 Burkholderia pseudomallei MSHR346 radical SAM domain protein YP_002894801.1 61792 D 536230 CDS YP_002894802.1 237810351 7887972 62444..62896 1 NC_012695.1 identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; queuosine biosynthesis protein QueD 62896 queD 7887972 queD Burkholderia pseudomallei MSHR346 queuosine biosynthesis protein QueD YP_002894802.1 62444 D 536230 CDS YP_002894803.1 237810352 7890010 62928..63080 1 NC_012695.1 hypothetical protein 63080 7890010 GBP346_A0076 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894803.1 62928 D 536230 CDS YP_002894804.1 237810353 7887093 63145..63285 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; HpcH/HpaI aldolase family protein 63285 7887093 GBP346_A0077 Burkholderia pseudomallei MSHR346 HpcH/HpaI aldolase family protein YP_002894804.1 63145 D 536230 CDS YP_002894805.1 237810354 7889849 63319..64104 1 NC_012695.1 identified by match to protein family HMM PF03328; 2-dehydro-3-deoxyglucarate aldolase 64104 7889849 GBP346_A0078 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxyglucarate aldolase YP_002894805.1 63319 D 536230 CDS YP_002894806.1 237810355 7889599 64101..64877 1 NC_012695.1 identified by match to protein family HMM PF08238; Sel1 repeat protein 64877 7889599 GBP346_A0079 Burkholderia pseudomallei MSHR346 Sel1 repeat protein YP_002894806.1 64101 D 536230 CDS YP_002894807.1 237810356 7886730 complement(65143..66291) 1 NC_012695.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA 66291 mrdB 7886730 mrdB Burkholderia pseudomallei MSHR346 rod shape-determining protein RodA YP_002894807.1 65143 R 536230 CDS YP_002894808.1 237810357 7889637 complement(66303..68714) 1 NC_012695.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein 2 68714 mrdA 7889637 mrdA Burkholderia pseudomallei MSHR346 penicillin-binding protein 2 YP_002894808.1 66303 R 536230 CDS YP_002894809.1 237810358 7890828 complement(68719..68871) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 68871 7890828 GBP346_A0082 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894809.1 68719 R 536230 CDS YP_002894810.1 237810359 7887981 complement(68898..69410) 1 NC_012695.1 identified by match to protein family HMM PF04093; match to protein family HMM TIGR03426; rod shape-determining protein MreD 69410 mreD 7887981 mreD Burkholderia pseudomallei MSHR346 rod shape-determining protein MreD YP_002894810.1 68898 R 536230 CDS YP_002894811.1 237810360 7888883 complement(69407..70480) 1 NC_012695.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 70480 mreC 7888883 mreC Burkholderia pseudomallei MSHR346 rod shape-determining protein MreC YP_002894811.1 69407 R 536230 CDS YP_002894812.1 237810361 7887642 complement(70600..71643) 1 NC_012695.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 71643 7887642 GBP346_A0085 Burkholderia pseudomallei MSHR346 rod shape-determining protein MreB YP_002894812.1 70600 R 536230 CDS YP_002894813.1 237810362 7890168 72009..72308 1 NC_012695.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 72308 gatC 7890168 gatC Burkholderia pseudomallei MSHR346 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_002894813.1 72009 D 536230 CDS YP_002894814.1 237810363 7888358 72421..73911 1 NC_012695.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 73911 gatA 7888358 gatA Burkholderia pseudomallei MSHR346 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002894814.1 72421 D 536230 CDS YP_002894815.1 237810364 7890598 73914..75386 1 NC_012695.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 75386 gatB 7890598 gatB Burkholderia pseudomallei MSHR346 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002894815.1 73914 D 536230 CDS YP_002894816.1 237810365 7888082 75513..76352 1 NC_012695.1 identified by match to protein family HMM PF03976; polyphosphate:AMP phosphotransferase 76352 7888082 GBP346_A0089 Burkholderia pseudomallei MSHR346 polyphosphate:AMP phosphotransferase YP_002894816.1 75513 D 536230 CDS YP_002894817.1 237810366 7889723 76385..77155 1 NC_012695.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 77155 xth_1 7889723 xth_1 Burkholderia pseudomallei MSHR346 exodeoxyribonuclease III YP_002894817.1 76385 D 536230 CDS YP_002894818.1 237810367 7887031 complement(77436..78500) 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family 78500 7887031 GBP346_A0091 Burkholderia pseudomallei MSHR346 oxidoreductase, zinc-binding dehydrogenase family YP_002894818.1 77436 R 536230 CDS YP_002894819.1 237810368 7887916 78710..79654 1 NC_012695.1 identified by match to protein family HMM PF00165; match to protein family HMM PF06719; AraC-type transcriptional regulator N-terminus domain protein 79654 7887916 GBP346_A0092 Burkholderia pseudomallei MSHR346 AraC-type transcriptional regulator N-terminus domain protein YP_002894819.1 78710 D 536230 CDS YP_002894820.1 237810369 7889698 complement(80028..81080) 1 NC_012695.1 identified by match to protein family HMM PF01435; peptidase, M48 family 81080 7889698 GBP346_A0093 Burkholderia pseudomallei MSHR346 peptidase, M48 family YP_002894820.1 80028 R 536230 CDS YP_002894821.1 237810370 7887165 complement(81070..82383) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 82383 7887165 GBP346_A0094 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002894821.1 81070 R 536230 CDS YP_002894822.1 237810371 7890693 complement(82395..83009) 1 NC_012695.1 identified by match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM TIGR02081; methionine biosynthesis protein MetW 83009 metW 7890693 metW Burkholderia pseudomallei MSHR346 methionine biosynthesis protein MetW YP_002894822.1 82395 R 536230 CDS YP_002894823.1 237810372 7887372 complement(83006..84151) 1 NC_012695.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 84151 metX 7887372 metX Burkholderia pseudomallei MSHR346 homoserine O-acetyltransferase YP_002894823.1 83006 R 536230 CDS YP_002894824.1 237810373 7887439 complement(84500..85192) 1 NC_012695.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 85192 slmA 7887439 slmA Burkholderia pseudomallei MSHR346 nucleoid occlusion protein YP_002894824.1 84500 R 536230 CDS YP_002894825.1 237810374 7890511 complement(85159..85962) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01993; HAD-superfamily hydrolase 85962 7890511 GBP346_A0098 Burkholderia pseudomallei MSHR346 HAD-superfamily hydrolase YP_002894825.1 85159 R 536230 CDS YP_002894826.1 237810375 7887065 complement(85959..87014) 1 NC_012695.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 87014 7887065 GBP346_A0099 Burkholderia pseudomallei MSHR346 acetylglutamate kinase YP_002894826.1 85959 R 536230 CDS YP_002894827.1 237810376 7888240 complement(87035..87157) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 87157 7888240 GBP346_A0100 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894827.1 87035 R 536230 CDS YP_002894828.1 237810377 7890770 87183..87434 1 NC_012695.1 hypothetical protein 87434 7890770 GBP346_A0101 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894828.1 87183 D 536230 CDS YP_002894829.1 237810378 7889286 87452..88732 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 88732 7889286 GBP346_A0102 Burkholderia pseudomallei MSHR346 sensor histidine kinase YP_002894829.1 87452 D 536230 CDS YP_002894830.1 237810379 7889316 88752..89294 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02954; photosynthetic apparatus regulatory protein RegA 89294 7889316 GBP346_A0103 Burkholderia pseudomallei MSHR346 photosynthetic apparatus regulatory protein RegA YP_002894830.1 88752 D 536230 CDS YP_002894831.1 237810380 7888073 complement(89728..91071) 1 NC_012695.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 91071 hslU 7888073 hslU Burkholderia pseudomallei MSHR346 ATP-dependent protease ATP-binding subunit HslU YP_002894831.1 89728 R 536230 CDS YP_002894832.1 237810381 7887097 complement(91081..91716) 1 NC_012695.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 91716 hslV 7887097 hslV Burkholderia pseudomallei MSHR346 ATP-dependent protease peptidase subunit YP_002894832.1 91081 R 536230 CDS YP_002894833.1 237810382 7887726 complement(91872..92288) 1 NC_012695.1 identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420; RNA polymerase-binding protein DksA 92288 dksA 7887726 dksA Burkholderia pseudomallei MSHR346 RNA polymerase-binding protein DksA YP_002894833.1 91872 R 536230 CDS YP_002894834.1 237810383 7888292 complement(92827..93903) 1 NC_012695.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; cobalamin synthesis protein/P47K family protein 93903 7888292 GBP346_A0107 Burkholderia pseudomallei MSHR346 cobalamin synthesis protein/P47K family protein YP_002894834.1 92827 R 536230 CDS YP_002894835.1 237810384 7886932 complement(94081..95358) 1 NC_012695.1 PUA domain protein 95358 7886932 GBP346_A0108 Burkholderia pseudomallei MSHR346 PUA domain protein YP_002894835.1 94081 R 536230 CDS YP_002894836.1 237810385 7888157 complement(95447..96379) 1 NC_012695.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 96379 xerC 7888157 xerC Burkholderia pseudomallei MSHR346 site-specific tyrosine recombinase XerC YP_002894836.1 95447 R 536230 CDS YP_002894837.1 237810386 7889945 complement(96410..97123) 1 NC_012695.1 identified by match to protein family HMM PF04340; hypothetical protein 97123 7889945 GBP346_A0110 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894837.1 96410 R 536230 CDS YP_002894838.1 237810387 7889736 complement(97171..98040) 1 NC_012695.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 98040 dapF 7889736 dapF Burkholderia pseudomallei MSHR346 diaminopimelate epimerase YP_002894838.1 97171 R 536230 CDS YP_002894839.1 237810388 7887482 complement(98081..98965) 1 NC_012695.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 98965 7887482 GBP346_A0112 Burkholderia pseudomallei MSHR346 lipid A biosynthesis lauroyl acyltransferase YP_002894839.1 98081 R 536230 CDS YP_002894840.1 237810389 7889756 99231..100418 1 NC_012695.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 100418 metK 7889756 metK Burkholderia pseudomallei MSHR346 S-adenosylmethionine synthetase YP_002894840.1 99231 D 536230 CDS YP_002894841.1 237810390 7886885 complement(100585..100938) 1 NC_012695.1 hypothetical protein 100938 7886885 GBP346_A0114 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894841.1 100585 R 536230 CDS YP_002894842.1 237810391 7890677 101155..102075 1 NC_012695.1 identified by match to protein family HMM PF05721; phytanoyl-CoA dioxygenase 102075 7890677 GBP346_A0115 Burkholderia pseudomallei MSHR346 phytanoyl-CoA dioxygenase YP_002894842.1 101155 D 536230 CDS YP_002894843.1 237810392 7887288 complement(102347..102553) 1 NC_012695.1 hypothetical protein 102553 7887288 GBP346_A0116 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894843.1 102347 R 536230 CDS YP_002894844.1 237810393 7890369 102728..103771 1 NC_012695.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 103771 7890369 GBP346_A0117 Burkholderia pseudomallei MSHR346 oxidoreductase, aldo/keto reductase family YP_002894844.1 102728 D 536230 CDS YP_002894845.1 237810394 7890666 complement(103814..103999) 1 NC_012695.1 hypothetical protein 103999 7890666 GBP346_A0118 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894845.1 103814 R 536230 CDS YP_002894846.1 237810395 7890723 complement(104267..105130) 1 NC_012695.1 identified by match to protein family HMM PF00892; permease of the drug/metabolite transporter 105130 7890723 GBP346_A0119 Burkholderia pseudomallei MSHR346 permease of the drug/metabolite transporter YP_002894846.1 104267 R 536230 CDS YP_002894847.1 237810396 7889299 complement(105252..105488) 1 NC_012695.1 hypothetical protein 105488 7889299 GBP346_A0120 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894847.1 105252 R 536230 CDS YP_002894848.1 237810397 7890637 complement(105485..106774) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 106774 7890637 GBP346_A0121 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002894848.1 105485 R 536230 CDS YP_002894849.1 237810398 7887788 106786..106917 1 NC_012695.1 hypothetical protein 106917 7887788 GBP346_A0122 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894849.1 106786 D 536230 CDS YP_002894850.1 237810399 7888454 complement(106998..107129) 1 NC_012695.1 hypothetical protein 107129 7888454 GBP346_A0123 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894850.1 106998 R 536230 CDS YP_002894851.1 237810400 7890615 107128..107340 1 NC_012695.1 hypothetical protein 107340 7890615 GBP346_A0124 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894851.1 107128 D 536230 CDS YP_002894852.1 237810401 7889340 107381..108412 1 NC_012695.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 108412 7889340 GBP346_A0125 Burkholderia pseudomallei MSHR346 serine/threonine protein kinase YP_002894852.1 107381 D 536230 CDS YP_002894853.1 237810402 7887928 complement(108683..108931) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 108931 7887928 GBP346_A0126 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894853.1 108683 R 536230 CDS YP_002894854.1 237810403 7888388 complement(109065..110483) 1 NC_012695.1 identified by match to protein family HMM PF00171; coniferyl aldehyde dehydrogenase 110483 7888388 GBP346_A0127 Burkholderia pseudomallei MSHR346 coniferyl aldehyde dehydrogenase YP_002894854.1 109065 R 536230 CDS YP_002894855.1 237810404 7890361 complement(110518..112197) 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; putative acyl-CoA dehydrogenase 112197 7890361 GBP346_A0128 Burkholderia pseudomallei MSHR346 putative acyl-CoA dehydrogenase YP_002894855.1 110518 R 536230 CDS YP_002894856.1 237810405 7887841 complement(112276..112401) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 112401 7887841 GBP346_A0129 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894856.1 112276 R 536230 CDS YP_002894857.1 237810406 7888338 112431..114074 1 NC_012695.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; alcohol dehydrogenase (acceptor) 114074 7888338 GBP346_A0130 Burkholderia pseudomallei MSHR346 alcohol dehydrogenase (acceptor) YP_002894857.1 112431 D 536230 CDS YP_002894858.1 237810407 7889872 complement(114114..115490) 1 NC_012695.1 identified by match to protein family HMM PF02120; flagellar hook-length control protein FliK 115490 7889872 GBP346_A0131 Burkholderia pseudomallei MSHR346 flagellar hook-length control protein FliK YP_002894858.1 114114 R 536230 CDS YP_002894859.1 237810408 7887924 complement(115547..115999) 1 NC_012695.1 identified by match to protein family HMM PF02050; match to protein family HMM TIGR02473; flagellar export protein FliJ 115999 fliJ 7887924 fliJ Burkholderia pseudomallei MSHR346 flagellar export protein FliJ YP_002894859.1 115547 R 536230 CDS YP_002894860.1 237810409 7887449 complement(116005..117576) 1 NC_012695.1 identified by match to protein family HMM PF00006; match to protein family HMM TIGR01026; match to protein family HMM TIGR03496; flagellar protein export ATPase FliI 117576 fliI 7887449 fliI Burkholderia pseudomallei MSHR346 flagellar protein export ATPase FliI YP_002894860.1 116005 R 536230 CDS YP_002894861.1 237810410 7887989 complement(117570..118250) 1 NC_012695.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 118250 fliH 7887989 fliH Burkholderia pseudomallei MSHR346 flagellar assembly protein H YP_002894861.1 117570 R 536230 CDS YP_002894862.1 237810411 7889673 complement(118243..119238) 1 NC_012695.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 119238 fliG 7889673 fliG Burkholderia pseudomallei MSHR346 flagellar motor switch protein G YP_002894862.1 118243 R 536230 CDS YP_002894863.1 237810412 7888106 complement(119228..121024) 1 NC_012695.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 121024 fliF 7888106 fliF Burkholderia pseudomallei MSHR346 flagellar MS-ring protein YP_002894863.1 119228 R 536230 CDS YP_002894864.1 237810413 7888241 121272..121613 1 NC_012695.1 identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205; flagellar hook-basal body complex protein FliE 121613 fliE 7888241 fliE Burkholderia pseudomallei MSHR346 flagellar hook-basal body complex protein FliE YP_002894864.1 121272 D 536230 CDS YP_002894865.1 237810414 7889452 121681..122169 1 NC_012695.1 identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208; flagellar protein FliS 122169 fliS 7889452 fliS Burkholderia pseudomallei MSHR346 flagellar protein FliS YP_002894865.1 121681 D 536230 CDS YP_002894866.1 237810415 7886912 122166..122492 1 NC_012695.1 hypothetical protein 122492 7886912 GBP346_A0139 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894866.1 122166 D 536230 CDS YP_002894867.1 237810416 7890854 122602..124155 1 NC_012695.1 hypothetical protein 124155 7890854 GBP346_A0140 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894867.1 122602 D 536230 CDS YP_002894868.1 237810417 7887621 124152..124469 1 NC_012695.1 flagellar biosynthetic protein FlhB domain protein 124469 7887621 GBP346_A0141 Burkholderia pseudomallei MSHR346 flagellar biosynthetic protein FlhB domain protein YP_002894868.1 124152 D 536230 CDS YP_002894869.1 237810418 7889708 124687..125406 1 NC_012695.1 identified by match to protein family HMM PF03929; PepSY-associated TM helix family protein 125406 7889708 GBP346_A0142 Burkholderia pseudomallei MSHR346 PepSY-associated TM helix family protein YP_002894869.1 124687 D 536230 CDS YP_002894870.1 237810419 7888058 complement(125494..126519) 1 NC_012695.1 identified by match to protein family HMM PF02625; carbon monoxide dehydrogenase accessory protein 126519 7888058 GBP346_A0143 Burkholderia pseudomallei MSHR346 carbon monoxide dehydrogenase accessory protein YP_002894870.1 125494 R 536230 CDS YP_002894871.1 237810420 7890602 complement(126718..128121) 1 NC_012695.1 identified by match to protein family HMM PF00324; amino acid permease 128121 7890602 GBP346_A0144 Burkholderia pseudomallei MSHR346 amino acid permease YP_002894871.1 126718 R 536230 CDS YP_002894872.1 237810421 7888360 complement(128363..129019) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator, LuxR family 129019 7888360 GBP346_A0145 Burkholderia pseudomallei MSHR346 DNA-binding response regulator, LuxR family YP_002894872.1 128363 R 536230 CDS YP_002894873.1 237810422 7889891 complement(129016..129864) 1 NC_012695.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor kinase protein 129864 7889891 GBP346_A0146 Burkholderia pseudomallei MSHR346 sensor kinase protein YP_002894873.1 129016 R 536230 CDS YP_002894874.1 237810423 7888497 complement(130278..131048) 1 NC_012695.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin--NADP reductase 131048 fpr_1 7888497 fpr_1 Burkholderia pseudomallei MSHR346 ferredoxin--NADP reductase YP_002894874.1 130278 R 536230 CDS YP_002894875.1 237810424 7890163 complement(131261..131914) 1 NC_012695.1 identified by match to protein family HMM PF01810; LysE type translocator 131914 7890163 GBP346_A0148 Burkholderia pseudomallei MSHR346 LysE type translocator YP_002894875.1 131261 R 536230 CDS YP_002894876.1 237810425 7888754 complement(131980..132792) 1 NC_012695.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase 132792 7888754 GBP346_A0149 Burkholderia pseudomallei MSHR346 endonuclease/exonuclease/phosphatase YP_002894876.1 131980 R 536230 CDS YP_002894877.1 237810426 7887750 complement(132799..133362) 1 NC_012695.1 hypothetical protein 133362 7887750 GBP346_A0150 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894877.1 132799 R 536230 CDS YP_002894878.1 237810427 7888434 complement(133459..133581) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 133581 7888434 GBP346_A0151 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894878.1 133459 R 536230 CDS YP_002894879.1 237810428 7888620 133723..134703 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF07728; ATP-dependent protease domain protein 134703 7888620 GBP346_A0152 Burkholderia pseudomallei MSHR346 ATP-dependent protease domain protein YP_002894879.1 133723 D 536230 CDS YP_002894880.1 237810429 7889825 134775..135896 1 NC_012695.1 identified by match to protein family HMM PF01266; FAD-dependent oxidoreductase 135896 7889825 GBP346_A0153 Burkholderia pseudomallei MSHR346 FAD-dependent oxidoreductase YP_002894880.1 134775 D 536230 CDS YP_002894881.1 237810430 7889233 136031..136345 1 NC_012695.1 identified by match to protein family HMM PF01355; high-potential iron-sulfur protein 136345 hip 7889233 hip Burkholderia pseudomallei MSHR346 high-potential iron-sulfur protein YP_002894881.1 136031 D 536230 CDS YP_002894882.1 237810431 7890587 136576..137868 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 137868 7890587 GBP346_A0155 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002894882.1 136576 D 536230 CDS YP_002894883.1 237810432 7890791 137914..138093 1 NC_012695.1 hypothetical protein 138093 7890791 GBP346_A0157 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894883.1 137914 D 536230 CDS YP_002894884.1 237810433 7887827 complement(138084..138236) 1 NC_012695.1 hypothetical protein 138236 7887827 GBP346_A0156 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894884.1 138084 R 536230 CDS YP_002894885.1 237810434 7889836 138293..139921 1 NC_012695.1 identified by match to protein family HMM PF00496; periplasmic dipeptide transport protein 139921 7889836 GBP346_A0158 Burkholderia pseudomallei MSHR346 periplasmic dipeptide transport protein YP_002894885.1 138293 D 536230 CDS YP_002894886.1 237810435 7887567 140033..141043 1 NC_012695.1 identified by match to protein family HMM PF00528; probable D,D-dipeptide transport system permease protein DdpB 141043 7887567 GBP346_A0159 Burkholderia pseudomallei MSHR346 probable D,D-dipeptide transport system permease protein DdpB YP_002894886.1 140033 D 536230 CDS YP_002894887.1 237810436 7890925 141118..142059 1 NC_012695.1 identified by match to protein family HMM PF00528; dipeptide ABC transporter, permease protein DppC 142059 7890925 GBP346_A0160 Burkholderia pseudomallei MSHR346 dipeptide ABC transporter, permease protein DppC YP_002894887.1 141118 D 536230 CDS YP_002894888.1 237810437 7890501 142061..143053 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein OppD 143053 7890501 GBP346_A0161 Burkholderia pseudomallei MSHR346 oligopeptide transport ATP-binding protein OppD YP_002894888.1 142061 D 536230 CDS YP_002894889.1 237810438 7888701 143050..144066 1 NC_012695.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 144066 dppF 7888701 dppF Burkholderia pseudomallei MSHR346 dipeptide transporter ATP-binding subunit YP_002894889.1 143050 D 536230 CDS YP_002894890.1 237810439 7890158 144071..145207 1 NC_012695.1 identified by match to protein family HMM PF07446; GumN family protein 145207 7890158 GBP346_A0163 Burkholderia pseudomallei MSHR346 GumN family protein YP_002894890.1 144071 D 536230 CDS YP_002894891.1 237810440 7890274 complement(145696..146652) 1 NC_012695.1 identified by match to protein family HMM PF06166; membrane protein 146652 7890274 GBP346_A0164 Burkholderia pseudomallei MSHR346 membrane protein YP_002894891.1 145696 R 536230 CDS YP_002894892.1 237810441 7887103 complement(146649..147401) 1 NC_012695.1 identified by match to protein family HMM PF06149; membrane protein 147401 7887103 GBP346_A0165 Burkholderia pseudomallei MSHR346 membrane protein YP_002894892.1 146649 R 536230 CDS YP_002894893.1 237810442 7888051 147612..148007 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 148007 7888051 GBP346_A0166 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894893.1 147612 D 536230 CDS YP_002894894.1 237810443 7887528 complement(148024..148788) 1 NC_012695.1 identified by match to protein family HMM PF03746; LamB/YcsF family protein 148788 7887528 GBP346_A0167 Burkholderia pseudomallei MSHR346 LamB/YcsF family protein YP_002894894.1 148024 R 536230 CDS YP_002894895.1 237810444 7890414 complement(148847..149926) 1 NC_012695.1 identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; allophanate hydrolase, subunit 2 149926 7890414 GBP346_A0168 Burkholderia pseudomallei MSHR346 allophanate hydrolase, subunit 2 YP_002894895.1 148847 R 536230 CDS YP_002894896.1 237810445 7887698 complement(149923..150693) 1 NC_012695.1 identified by match to protein family HMM PF02682; match to protein family HMM TIGR00370; hypothetical protein 150693 7887698 GBP346_A0169 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894896.1 149923 R 536230 CDS YP_002894897.1 237810446 7889305 150729..151241 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator 151241 7889305 GBP346_A0170 Burkholderia pseudomallei MSHR346 transcriptional regulator YP_002894897.1 150729 D 536230 CDS YP_002894898.1 237810447 7888118 complement(151481..152077) 1 NC_012695.1 identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 152077 7888118 GBP346_A0171 Burkholderia pseudomallei MSHR346 5-formyltetrahydrofolate cyclo-ligase YP_002894898.1 151481 R 536230 CDS YP_002894899.1 237810448 7890757 152099..154054 1 NC_012695.1 identified by match to protein family HMM PF01464; transglycosylase, SLT family 154054 7890757 GBP346_A0172 Burkholderia pseudomallei MSHR346 transglycosylase, SLT family YP_002894899.1 152099 D 536230 CDS YP_002894900.1 237810449 7886886 154176..155135 1 NC_012695.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 155135 7886886 GBP346_A0173 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase family protein YP_002894900.1 154176 D 536230 CDS YP_002894901.1 237810450 7887259 155199..155846 1 NC_012695.1 identified by match to protein family HMM PF02798; glutathione S-transferase domain protein 155846 7887259 GBP346_A0174 Burkholderia pseudomallei MSHR346 glutathione S-transferase domain protein YP_002894901.1 155199 D 536230 CDS YP_002894902.1 237810451 7888857 155843..157084 1 NC_012695.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 157084 cca 7888857 cca Burkholderia pseudomallei MSHR346 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_002894902.1 155843 D 536230 CDS YP_002894903.1 237810452 7890473 complement(157279..157527) 1 NC_012695.1 putative brain expressed, associated with Nedd4 isoform 1 157527 7890473 GBP346_A0176 Burkholderia pseudomallei MSHR346 putative brain expressed, associated with Nedd4 isoform 1 YP_002894903.1 157279 R 536230 CDS YP_002894904.1 237810453 7889516 complement(157746..157967) 1 NC_012695.1 RebB protein 157967 7889516 GBP346_A0177 Burkholderia pseudomallei MSHR346 RebB protein YP_002894904.1 157746 R 536230 CDS YP_002894905.1 237810454 7887743 158070..158303 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 158303 7887743 GBP346_A0178 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894905.1 158070 D 536230 CDS YP_002894906.1 237810455 7887692 complement(158446..158940) 1 NC_012695.1 identified by match to protein family HMM PF05130; flagellar protein, FlgN family 158940 7887692 GBP346_A0179 Burkholderia pseudomallei MSHR346 flagellar protein, FlgN family YP_002894906.1 158446 R 536230 CDS YP_002894907.1 237810456 7889320 complement(158966..159310) 1 NC_012695.1 identified by match to protein family HMM PF04316; anti-sigma-28 factor, FlgM 159310 7889320 GBP346_A0180 Burkholderia pseudomallei MSHR346 anti-sigma-28 factor, FlgM YP_002894907.1 158966 R 536230 CDS YP_002894908.1 237810457 7889225 complement(159414..160943) 1 NC_012695.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 160943 flgA 7889225 flgA Burkholderia pseudomallei MSHR346 flagellar basal body P-ring biosynthesis protein FlgA YP_002894908.1 159414 R 536230 CDS YP_002894909.1 237810458 7889927 161215..161706 1 NC_012695.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 161706 flgB 7889927 flgB Burkholderia pseudomallei MSHR346 flagellar basal body rod protein FlgB YP_002894909.1 161215 D 536230 CDS YP_002894910.1 237810459 7887641 161790..162215 1 NC_012695.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 162215 flgC 7887641 flgC Burkholderia pseudomallei MSHR346 flagellar basal body rod protein FlgC YP_002894910.1 161790 D 536230 CDS YP_002894911.1 237810460 7890785 162269..163111 1 NC_012695.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 163111 flgD 7890785 flgD Burkholderia pseudomallei MSHR346 flagellar basal body rod modification protein YP_002894911.1 162269 D 536230 CDS YP_002894912.1 237810461 7890510 163139..164380 1 NC_012695.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 164380 flgE 7890510 flgE Burkholderia pseudomallei MSHR346 flagellar hook protein FlgE YP_002894912.1 163139 D 536230 CDS YP_002894913.1 237810462 7890175 164407..165168 1 NC_012695.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 165168 flgF 7890175 flgF Burkholderia pseudomallei MSHR346 flagellar basal body rod protein FlgF YP_002894913.1 164407 D 536230 CDS YP_002894914.1 237810463 7887422 165202..165990 1 NC_012695.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 165990 flgG 7887422 flgG Burkholderia pseudomallei MSHR346 flagellar basal body rod protein FlgG YP_002894914.1 165202 D 536230 CDS YP_002894915.1 237810464 7888526 166011..166733 1 NC_012695.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein 166733 flgH 7888526 flgH Burkholderia pseudomallei MSHR346 flagellar basal body L-ring protein YP_002894915.1 166011 D 536230 CDS YP_002894916.1 237810465 7887180 166727..167932 1 NC_012695.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 167932 flgI 7887180 flgI Burkholderia pseudomallei MSHR346 flagellar basal body P-ring protein YP_002894916.1 166727 D 536230 CDS YP_002894917.1 237810466 7889699 167933..168868 1 NC_012695.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 168868 flgJ 7889699 flgJ Burkholderia pseudomallei MSHR346 flagellar rod assembly protein/muramidase FlgJ YP_002894917.1 167933 D 536230 CDS YP_002894918.1 237810467 7890351 169084..169842 1 NC_012695.1 identified by match to protein family HMM PF07238; match to protein family HMM PF07317; YcgR protein superfamily 169842 7890351 GBP346_A0191 Burkholderia pseudomallei MSHR346 YcgR protein superfamily YP_002894918.1 169084 D 536230 CDS YP_002894919.1 237810468 7887077 169907..172051 1 NC_012695.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 172051 flgK 7887077 flgK Burkholderia pseudomallei MSHR346 flagellar hook-associated protein FlgK YP_002894919.1 169907 D 536230 CDS YP_002894920.1 237810469 7890436 172067..173299 1 NC_012695.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 173299 flgL 7890436 flgL Burkholderia pseudomallei MSHR346 flagellar hook-associated protein FlgL YP_002894920.1 172067 D 536230 CDS YP_002894921.1 237810470 7889404 173417..173608 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 173608 7889404 GBP346_A0194 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894921.1 173417 D 536230 CDS YP_002894922.1 237810471 7890502 173667..174974 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil-xanthine permease 174974 7890502 GBP346_A0195 Burkholderia pseudomallei MSHR346 uracil-xanthine permease YP_002894922.1 173667 D 536230 CDS YP_002894923.1 237810472 7890532 174971..175168 1 NC_012695.1 hypothetical protein 175168 7890532 GBP346_A0196 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894923.1 174971 D 536230 CDS YP_002894924.1 237810473 7890955 complement(175184..176065) 1 NC_012695.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 176065 7890955 GBP346_A0197 Burkholderia pseudomallei MSHR346 DNA-binding transcriptional activator GcvA YP_002894924.1 175184 R 536230 CDS YP_002894925.1 237810474 7888941 176163..176762 1 NC_012695.1 identified by match to protein family HMM PF02417; chromate transporter 176762 7888941 GBP346_A0198 Burkholderia pseudomallei MSHR346 chromate transporter YP_002894925.1 176163 D 536230 CDS YP_002894926.1 237810475 7887327 176759..177289 1 NC_012695.1 identified by match to protein family HMM PF02417; chromate transporter family 177289 7887327 GBP346_A0199 Burkholderia pseudomallei MSHR346 chromate transporter family YP_002894926.1 176759 D 536230 CDS YP_002894927.1 237810476 7886844 177277..177435 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 177435 7886844 GBP346_A0200 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894927.1 177277 D 536230 CDS YP_002894928.1 237810477 7889114 complement(177620..177958) 1 NC_012695.1 hypothetical protein 177958 7889114 GBP346_A0201 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894928.1 177620 R 536230 CDS YP_002894929.1 237810478 7886711 178072..178416 1 NC_012695.1 identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686; putative alkylphosphonate utilization operon protein PhnA 178416 7886711 GBP346_A0202 Burkholderia pseudomallei MSHR346 putative alkylphosphonate utilization operon protein PhnA YP_002894929.1 178072 D 536230 CDS YP_002894930.1 237810479 7887551 178434..179174 1 NC_012695.1 identified by match to protein family HMM PF06912; hypothetical protein 179174 7887551 GBP346_A0203 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894930.1 178434 D 536230 CDS YP_002894931.1 237810480 7889527 complement(179271..179456) 1 NC_012695.1 hypothetical protein 179456 7889527 GBP346_A0204 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894931.1 179271 R 536230 CDS YP_002894932.1 237810481 7887101 179413..179571 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 179571 7887101 GBP346_A0205 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894932.1 179413 D 536230 CDS YP_002894933.1 237810482 7889783 179715..180848 1 NC_012695.1 identified by match to protein family HMM PF00267; outer membrane porin 180848 7889783 GBP346_A0206 Burkholderia pseudomallei MSHR346 outer membrane porin YP_002894933.1 179715 D 536230 CDS YP_002894934.1 237810483 7890140 complement(181006..181827) 1 NC_012695.1 hypothetical protein 181827 7890140 GBP346_A0207 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894934.1 181006 R 536230 CDS YP_002894935.1 237810484 7886864 complement(181887..182450) 1 NC_012695.1 putative lipoprotein 182450 7886864 GBP346_A0208 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002894935.1 181887 R 536230 CDS YP_002894936.1 237810485 7888727 complement(182702..182860) 1 NC_012695.1 hypothetical protein 182860 7888727 GBP346_A0209 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894936.1 182702 R 536230 CDS YP_002894937.1 237810486 7887361 complement(182818..183798) 1 NC_012695.1 identified by match to protein family HMM TIGR03476; membrane protein 183798 7887361 GBP346_A0210 Burkholderia pseudomallei MSHR346 membrane protein YP_002894937.1 182818 R 536230 CDS YP_002894938.1 237810487 7889528 complement(183795..183914) 1 NC_012695.1 hypothetical protein 183914 7889528 GBP346_A0211 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894938.1 183795 R 536230 CDS YP_002894939.1 237810488 7887770 complement(183881..185149) 1 NC_012695.1 identified by match to protein family HMM TIGR03472; hopanoid biosynthesis associated glycosyl transferase protein HpnI 185149 hpnI_1 7887770 hpnI_1 Burkholderia pseudomallei MSHR346 hopanoid biosynthesis associated glycosyl transferase protein HpnI YP_002894939.1 183881 R 536230 CDS YP_002894940.1 237810489 7890869 complement(185531..187045) 1 NC_012695.1 identified by match to protein family HMM PF04966; carbohydrate porin, OprB family 187045 7890869 GBP346_A0213 Burkholderia pseudomallei MSHR346 carbohydrate porin, OprB family YP_002894940.1 185531 R 536230 CDS YP_002894941.1 237810490 7887835 complement(187147..187407) 1 NC_012695.1 hypothetical protein 187407 7887835 GBP346_A0214 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894941.1 187147 R 536230 CDS YP_002894942.1 237810491 7890809 complement(187589..187912) 1 NC_012695.1 hypothetical protein 187912 7890809 GBP346_A0215 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894942.1 187589 R 536230 CDS YP_002894943.1 237810492 7889513 complement(187933..188382) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 188382 7889513 GBP346_A0216 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894943.1 187933 R 536230 CDS YP_002894944.1 237810493 7888969 188440..188580 1 NC_012695.1 hypothetical protein 188580 7888969 GBP346_A0217 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894944.1 188440 D 536230 CDS YP_002894945.1 237810494 7887688 188600..190375 1 NC_012695.1 identified by match to protein family HMM PF01566; metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 190375 7887688 GBP346_A0218 Burkholderia pseudomallei MSHR346 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family YP_002894945.1 188600 D 536230 CDS YP_002894946.1 237810495 7886812 190503..190670 1 NC_012695.1 hypothetical protein 190670 7886812 GBP346_A0219 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894946.1 190503 D 536230 CDS YP_002894947.1 237810496 7886735 complement(190708..190896) 1 NC_012695.1 hypothetical protein 190896 7886735 GBP346_A0220 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894947.1 190708 R 536230 CDS YP_002894948.1 237810497 7888540 190850..191158 1 NC_012695.1 hypothetical protein 191158 7888540 GBP346_A0221 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894948.1 190850 D 536230 CDS YP_002894949.1 237810498 7886738 191355..192716 1 NC_012695.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01424; glutathione-disulfide reductase 192716 gor 7886738 gor Burkholderia pseudomallei MSHR346 glutathione-disulfide reductase YP_002894949.1 191355 D 536230 CDS YP_002894950.1 237810499 7890490 complement(193030..193266) 1 NC_012695.1 hypothetical protein 193266 7890490 GBP346_A0223 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894950.1 193030 R 536230 CDS YP_002894951.1 237810500 7887172 193336..194676 1 NC_012695.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 194676 argG_1 7887172 argG_1 Burkholderia pseudomallei MSHR346 argininosuccinate synthase YP_002894951.1 193336 D 536230 CDS YP_002894952.1 237810501 7889264 194802..195473 1 NC_012695.1 hypothetical protein 195473 7889264 GBP346_A0225 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894952.1 194802 D 536230 CDS YP_002894953.1 237810502 7887270 195581..196288 1 NC_012695.1 hypothetical protein 196288 7887270 GBP346_A0226 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894953.1 195581 D 536230 CDS YP_002894954.1 237810503 7889077 196301..196462 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 196462 7889077 GBP346_A0227 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894954.1 196301 D 536230 CDS YP_002894955.1 237810504 7889644 196523..196858 1 NC_012695.1 identified by match to protein family HMM PF00403; heavy-metal-associated domain protein 196858 7889644 GBP346_A0228 Burkholderia pseudomallei MSHR346 heavy-metal-associated domain protein YP_002894955.1 196523 D 536230 CDS YP_002894956.1 237810505 7890016 197195..197383 1 NC_012695.1 hypothetical protein 197383 7890016 GBP346_A0229 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894956.1 197195 D 536230 CDS YP_002894957.1 237810506 7888939 complement(197429..199957) 1 NC_012695.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase 199957 7888939 GBP346_A0230 Burkholderia pseudomallei MSHR346 copper-exporting ATPase YP_002894957.1 197429 R 536230 CDS YP_002894958.1 237810507 7889394 199964..200206 1 NC_012695.1 hypothetical protein 200206 7889394 GBP346_A0231 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894958.1 199964 D 536230 CDS YP_002894959.1 237810508 7888144 200506..201180 1 NC_012695.1 identified by match to protein family HMM PF04011; LemA family protein 201180 7888144 GBP346_A0232 Burkholderia pseudomallei MSHR346 LemA family protein YP_002894959.1 200506 D 536230 CDS YP_002894960.1 237810509 7889108 201177..202025 1 NC_012695.1 identified by match to protein family HMM PF04536; methanol dehydrogenase-like protein 202025 7889108 GBP346_A0233 Burkholderia pseudomallei MSHR346 methanol dehydrogenase-like protein YP_002894960.1 201177 D 536230 CDS YP_002894961.1 237810510 7888539 202025..202522 1 NC_012695.1 identified by match to protein family HMM PF04536; hypothetical protein 202522 7888539 GBP346_A0234 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894961.1 202025 D 536230 CDS YP_002894962.1 237810511 7890909 202556..203032 1 NC_012695.1 putative lipoprotein 203032 7890909 GBP346_A0236 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002894962.1 202556 D 536230 CDS YP_002894963.1 237810512 7890855 complement(203029..203178) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 203178 7890855 GBP346_A0235 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894963.1 203029 R 536230 CDS YP_002894964.1 237810513 7889619 203131..204432 1 NC_012695.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 204432 7889619 GBP346_A0237 Burkholderia pseudomallei MSHR346 outer membrane efflux protein YP_002894964.1 203131 D 536230 CDS YP_002894965.1 237810514 7889622 204443..206014 1 NC_012695.1 identified by match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 206014 7889622 GBP346_A0238 Burkholderia pseudomallei MSHR346 efflux transporter, RND family, MFP subunit YP_002894965.1 204443 D 536230 CDS YP_002894966.1 237810515 7889042 206011..209223 1 NC_012695.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; cation efflux system protein CusA 209223 7889042 GBP346_A0239 Burkholderia pseudomallei MSHR346 cation efflux system protein CusA YP_002894966.1 206011 D 536230 CDS YP_002894967.1 237810516 7889378 209220..209561 1 NC_012695.1 efflux transporter, RND family, MFP subunit 209561 7889378 GBP346_A0240 Burkholderia pseudomallei MSHR346 efflux transporter, RND family, MFP subunit YP_002894967.1 209220 D 536230 CDS YP_002894968.1 237810517 7888977 209565..209729 1 NC_012695.1 hypothetical protein 209729 7888977 GBP346_A0241 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894968.1 209565 D 536230 CDS YP_002894969.1 237810518 7889120 209843..210208 1 NC_012695.1 identified by match to protein family HMM PF01382; avidin family protein 210208 7889120 GBP346_A0242 Burkholderia pseudomallei MSHR346 avidin family protein YP_002894969.1 209843 D 536230 CDS YP_002894970.1 237810519 7887124 complement(210283..212115) 1 NC_012695.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 212115 glmS_1 7887124 glmS_1 Burkholderia pseudomallei MSHR346 glucosamine--fructose-6-phosphate aminotransferase YP_002894970.1 210283 R 536230 CDS YP_002894971.1 237810520 7890883 complement(212179..213540) 1 NC_012695.1 identified by match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM PF01128; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 213540 glmU 7890883 glmU Burkholderia pseudomallei MSHR346 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_002894971.1 212179 R 536230 CDS YP_002894972.1 237810521 7888918 complement(213579..213875) 1 NC_012695.1 hypothetical protein 213875 7888918 GBP346_A0245 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894972.1 213579 R 536230 CDS YP_002894973.1 237810522 7888577 complement(214109..215104) 1 NC_012695.1 identified by match to protein family HMM PF01171; PP-loop family protein 215104 7888577 GBP346_A0246 Burkholderia pseudomallei MSHR346 PP-loop family protein YP_002894973.1 214109 R 536230 CDS YP_002894974.1 237810523 7887512 complement(215101..215505) 1 NC_012695.1 identified by match to protein family HMM TIGR00526; dihydroneopterin aldolase 215505 folB_1 7887512 folB_1 Burkholderia pseudomallei MSHR346 dihydroneopterin aldolase YP_002894974.1 215101 R 536230 CDS YP_002894975.1 237810524 7888656 complement(215587..216468) 1 NC_012695.1 short-chain dehydrogenase/reductase SDR 216468 7888656 GBP346_A0248 Burkholderia pseudomallei MSHR346 short-chain dehydrogenase/reductase SDR YP_002894975.1 215587 R 536230 CDS YP_002894976.1 237810525 7889956 216536..217726 1 NC_012695.1 identified by match to protein family HMM PF02636; hypothetical protein 217726 7889956 GBP346_A0249 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894976.1 216536 D 536230 CDS YP_002894977.1 237810526 7890094 217744..217938 1 NC_012695.1 hypothetical protein 217938 7890094 GBP346_A0250 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894977.1 217744 D 536230 CDS YP_002894978.1 237810527 7888450 217935..218093 1 NC_012695.1 hypothetical protein 218093 7888450 GBP346_A0251 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894978.1 217935 D 536230 CDS YP_002894979.1 237810528 7888167 complement(218227..218451) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 218451 7888167 GBP346_A0252 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894979.1 218227 R 536230 CDS YP_002894980.1 237810529 7886873 complement(218763..219671) 1 NC_012695.1 identified by match to protein family HMM PF00294; PfkB domain protein 219671 7886873 GBP346_A0253 Burkholderia pseudomallei MSHR346 PfkB domain protein YP_002894980.1 218763 R 536230 CDS YP_002894981.1 237810530 7890819 complement(219668..221146) 1 NC_012695.1 identified by match to protein family HMM PF07221; N-acylglucosamine 2-epimerase 221146 7890819 GBP346_A0254 Burkholderia pseudomallei MSHR346 N-acylglucosamine 2-epimerase YP_002894981.1 219668 R 536230 CDS YP_002894982.1 237810531 7887614 complement(221143..222162) 1 NC_012695.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family 222162 7887614 GBP346_A0255 Burkholderia pseudomallei MSHR346 transcriptional regulator, LacI family YP_002894982.1 221143 R 536230 CDS YP_002894983.1 237810532 7889514 complement(222333..223892) 1 NC_012695.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 223892 7889514 GBP346_A0256 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002894983.1 222333 R 536230 CDS YP_002894984.1 237810533 7887838 complement(223955..224479) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 224479 7887838 GBP346_A0257 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894984.1 223955 R 536230 CDS YP_002894985.1 237810534 7887092 complement(224536..225576) 1 NC_012695.1 identified by match to protein family HMM PF01758; sodium/bile acid symporter family protein 225576 7887092 GBP346_A0258 Burkholderia pseudomallei MSHR346 sodium/bile acid symporter family protein YP_002894985.1 224536 R 536230 CDS YP_002894986.1 237810535 7890273 225959..226435 1 NC_012695.1 hypothetical protein 226435 7890273 GBP346_A0260 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894986.1 225959 D 536230 CDS YP_002894987.1 237810536 7888346 complement(226396..226560) 1 NC_012695.1 hypothetical protein 226560 7888346 GBP346_A0259 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894987.1 226396 R 536230 CDS YP_002894988.1 237810537 7889312 complement(226518..226661) 1 NC_012695.1 hypothetical protein 226661 7889312 GBP346_A0261 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894988.1 226518 R 536230 CDS YP_002894989.1 237810538 7890494 226825..227901 1 NC_012695.1 identified by match to protein family HMM PF00267; outer membrane porin 227901 7890494 GBP346_A0262 Burkholderia pseudomallei MSHR346 outer membrane porin YP_002894989.1 226825 D 536230 CDS YP_002894990.1 237810539 7890687 227935..229023 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 229023 7890687 GBP346_A0263 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002894990.1 227935 D 536230 CDS YP_002894991.1 237810540 7888815 229129..229440 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 229440 7888815 GBP346_A0264 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894991.1 229129 D 536230 CDS YP_002894992.1 237810541 7890066 complement(229463..230422) 1 NC_012695.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family 230422 7890066 GBP346_A0265 Burkholderia pseudomallei MSHR346 oxidoreductase, 2-nitropropane dioxygenase family YP_002894992.1 229463 R 536230 CDS YP_002894993.1 237810542 7889739 230459..230623 1 NC_012695.1 hypothetical protein 230623 7889739 GBP346_A0266 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894993.1 230459 D 536230 CDS YP_002894994.1 237810543 7890356 230718..231611 1 NC_012695.1 identified by match to protein family HMM PF00561; haloacetate dehalogenase H-1 231611 7890356 GBP346_A0267 Burkholderia pseudomallei MSHR346 haloacetate dehalogenase H-1 YP_002894994.1 230718 D 536230 CDS YP_002894995.1 237810544 7890772 complement(231693..232181) 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 232181 7890772 GBP346_A0268 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002894995.1 231693 R 536230 CDS YP_002894996.1 237810545 7887287 232293..233207 1 NC_012695.1 identified by match to protein family HMM PF00892; hypothetical protein 233207 7887287 GBP346_A0269 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002894996.1 232293 D 536230 CDS YP_002894997.1 237810546 7890715 complement(233494..233817) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF06945; YbaK/prolyl-tRNA synthetase associated region 233817 7890715 GBP346_A0270 Burkholderia pseudomallei MSHR346 YbaK/prolyl-tRNA synthetase associated region YP_002894997.1 233494 R 536230 CDS YP_002894998.1 237810547 7886890 complement(233823..234329) 1 NC_012695.1 identified by match to protein family HMM PF04073; YbaK 234329 7886890 GBP346_A0271 Burkholderia pseudomallei MSHR346 YbaK YP_002894998.1 233823 R 536230 CDS YP_002894999.1 237810548 7890221 complement(234385..235320) 1 NC_012695.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 235320 7890221 GBP346_A0272 Burkholderia pseudomallei MSHR346 hydroxymethylglutaryl-CoA lyase YP_002894999.1 234385 R 536230 CDS YP_002895000.1 237810549 7890495 complement(235406..236347) 1 NC_012695.1 identified by match to protein family HMM PF02826; putative 2-hydroxyacid dehydrogenase GhrA 236347 7890495 GBP346_A0273 Burkholderia pseudomallei MSHR346 putative 2-hydroxyacid dehydrogenase GhrA YP_002895000.1 235406 R 536230 CDS YP_002895001.1 237810550 7889655 complement(236352..236789) 1 NC_012695.1 identified by match to protein family HMM PF00903; glyoxalase family protein 236789 7889655 GBP346_A0274 Burkholderia pseudomallei MSHR346 glyoxalase family protein YP_002895001.1 236352 R 536230 CDS YP_002895002.1 237810551 7888997 complement(236814..236948) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 236948 7888997 GBP346_A0275 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895002.1 236814 R 536230 CDS YP_002895003.1 237810552 7889815 236939..237568 1 NC_012695.1 identified by match to protein family HMM PF06821; putative hydrolase 237568 7889815 GBP346_A0276 Burkholderia pseudomallei MSHR346 putative hydrolase YP_002895003.1 236939 D 536230 CDS YP_002895004.1 237810553 7887940 complement(237597..238007) 1 NC_012695.1 identified by match to protein family HMM PF00293; ADP-ribose pyrophosphatase 238007 7887940 GBP346_A0277 Burkholderia pseudomallei MSHR346 ADP-ribose pyrophosphatase YP_002895004.1 237597 R 536230 CDS YP_002895005.1 237810554 7888239 238048..238161 1 NC_012695.1 hypothetical protein 238161 7888239 GBP346_A0279 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895005.1 238048 D 536230 CDS YP_002895006.1 237810555 7890214 complement(238151..240268) 1 NC_012695.1 identified by match to protein family HMM PF04185; match to protein family HMM PF05506; match to protein family HMM TIGR03396; phospholipase C, phosphocholine-specific 240268 7890214 GBP346_A0278 Burkholderia pseudomallei MSHR346 phospholipase C, phosphocholine-specific YP_002895006.1 238151 R 536230 CDS YP_002895007.1 237810556 7889834 complement(240315..240611) 1 NC_012695.1 putative lipoprotein 240611 7889834 GBP346_A0280 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895007.1 240315 R 536230 CDS YP_002895008.1 237810557 7889909 complement(240849..241307) 1 NC_012695.1 identified by match to protein family HMM PF01037; leucine-responsive regulatory protein 241307 7889909 GBP346_A0281 Burkholderia pseudomallei MSHR346 leucine-responsive regulatory protein YP_002895008.1 240849 R 536230 CDS YP_002895009.1 237810558 7887347 241432..242160 1 NC_012695.1 identified by match to protein family HMM PF03591; AzlC family protein 242160 7887347 GBP346_A0282 Burkholderia pseudomallei MSHR346 AzlC family protein YP_002895009.1 241432 D 536230 CDS YP_002895010.1 237810559 7889817 242157..242459 1 NC_012695.1 identified by match to protein family HMM PF05437; AzlD family protein 242459 7889817 GBP346_A0283 Burkholderia pseudomallei MSHR346 AzlD family protein YP_002895010.1 242157 D 536230 CDS YP_002895011.1 237810560 7890193 242561..243289 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 243289 7890193 GBP346_A0284 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002895011.1 242561 D 536230 CDS YP_002895012.1 237810561 7887375 complement(243653..244246) 1 NC_012695.1 identified by match to protein family HMM PF02630; SCO1/SenC family protein 244246 7887375 GBP346_A0285 Burkholderia pseudomallei MSHR346 SCO1/SenC family protein YP_002895012.1 243653 R 536230 CDS YP_002895013.1 237810562 7886897 complement(244274..247117) 1 NC_012695.1 identified by match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; kelch domain protein 247117 7886897 GBP346_A0286 Burkholderia pseudomallei MSHR346 kelch domain protein YP_002895013.1 244274 R 536230 CDS YP_002895014.1 237810563 7890205 247491..247709 1 NC_012695.1 hypothetical protein 247709 7890205 GBP346_A0287 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895014.1 247491 D 536230 CDS YP_002895015.1 237810564 7888879 247766..248011 1 NC_012695.1 hypothetical protein 248011 7888879 GBP346_A0288 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895015.1 247766 D 536230 CDS YP_002895016.1 237810565 7888495 complement(248072..248968) 1 NC_012695.1 identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 248968 dapA_1 7888495 dapA_1 Burkholderia pseudomallei MSHR346 dihydrodipicolinate synthase YP_002895016.1 248072 R 536230 CDS YP_002895017.1 237810566 7887887 complement(249099..249281) 1 NC_012695.1 hypothetical protein 249281 7887887 GBP346_A0290 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895017.1 249099 R 536230 CDS YP_002895018.1 237810567 7889542 complement(249238..249747) 1 NC_012695.1 putative insertion element protein 249747 7889542 GBP346_A0291 Burkholderia pseudomallei MSHR346 putative insertion element protein YP_002895018.1 249238 R 536230 CDS YP_002895019.1 237810568 7888425 complement(250142..250708) 1 NC_012695.1 hypothetical protein 250708 7888425 GBP346_A0292 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895019.1 250142 R 536230 CDS YP_002895020.1 237810569 7887166 251061..251618 1 NC_012695.1 hypothetical protein 251618 7887166 GBP346_A0293 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895020.1 251061 D 536230 CDS YP_002895021.1 237810570 7888347 complement(251857..251991) 1 NC_012695.1 hypothetical protein 251991 7888347 GBP346_A0294 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895021.1 251857 R 536230 CDS YP_002895022.1 237810571 7890571 252088..252744 1 NC_012695.1 identified by match to protein family HMM PF00158; Fis family regulatory protein 252744 7890571 GBP346_A0295 Burkholderia pseudomallei MSHR346 Fis family regulatory protein YP_002895022.1 252088 D 536230 CDS YP_002895023.1 237810572 7890254 252793..252978 1 NC_012695.1 hypothetical protein 252978 7890254 GBP346_A0296 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895023.1 252793 D 536230 CDS YP_002895024.1 237810573 7886917 253213..254226 1 NC_012695.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971; sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) 254226 7886917 GBP346_A0297 Burkholderia pseudomallei MSHR346 sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) YP_002895024.1 253213 D 536230 CDS YP_002895025.1 237810574 7889819 254729..256420 1 NC_012695.1 identified by match to protein family HMM PF00450; serine carboxypeptidase family protein 256420 7889819 GBP346_A0298 Burkholderia pseudomallei MSHR346 serine carboxypeptidase family protein YP_002895025.1 254729 D 536230 CDS YP_002895026.1 237810575 7890328 256493..256897 1 NC_012695.1 hypothetical protein 256897 7890328 GBP346_A0299 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895026.1 256493 D 536230 CDS YP_002895027.1 237810576 7890823 complement(256977..257138) 1 NC_012695.1 hypothetical protein 257138 7890823 GBP346_A0300 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895027.1 256977 R 536230 CDS YP_002895028.1 237810577 7888841 257137..258012 1 NC_012695.1 identified by match to protein family HMM PF01007; match to protein family HMM PF07885; inward rectifier potassium channel 258012 7888841 GBP346_A0301 Burkholderia pseudomallei MSHR346 inward rectifier potassium channel YP_002895028.1 257137 D 536230 CDS YP_002895029.1 237810578 7887322 complement(258096..258215) 1 NC_012695.1 hypothetical protein 258215 7887322 GBP346_A0302 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895029.1 258096 R 536230 CDS YP_002895030.1 237810579 7889459 258229..261804 1 NC_012695.1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 261804 7889459 GBP346_A0303 Burkholderia pseudomallei MSHR346 2-oxoacid ferredoxin oxidoreductase YP_002895030.1 258229 D 536230 CDS YP_002895031.1 237810580 7890031 complement(262088..263755) 1 NC_012695.1 identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 263755 7890031 GBP346_A0304 Burkholderia pseudomallei MSHR346 Na+/H+ antiporter YP_002895031.1 262088 R 536230 CDS YP_002895032.1 237810581 7887223 263809..265356 1 NC_012695.1 identified by match to protein family HMM PF00563; EAL domain protein 265356 7887223 GBP346_A0305 Burkholderia pseudomallei MSHR346 EAL domain protein YP_002895032.1 263809 D 536230 CDS YP_002895033.1 237810582 7888490 265670..265813 1 NC_012695.1 hypothetical protein 265813 7888490 GBP346_A0306 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895033.1 265670 D 536230 CDS YP_002895034.1 237810583 7886766 265810..266190 1 NC_012695.1 hypothetical protein 266190 7886766 GBP346_A0308 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895034.1 265810 D 536230 CDS YP_002895035.1 237810584 7887956 complement(266171..266314) 1 NC_012695.1 hypothetical protein 266314 7887956 GBP346_A0307 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895035.1 266171 R 536230 CDS YP_002895036.1 237810585 7890840 266486..267925 1 NC_012695.1 identified by match to protein family HMM PF00245; alkaline phosphatase family protein 267925 7890840 GBP346_A0309 Burkholderia pseudomallei MSHR346 alkaline phosphatase family protein YP_002895036.1 266486 D 536230 CDS YP_002895037.1 237810586 7888424 267958..269361 1 NC_012695.1 identified by match to protein family HMM PF00245; alkaline phosphatase family protein 269361 7888424 GBP346_A0310 Burkholderia pseudomallei MSHR346 alkaline phosphatase family protein YP_002895037.1 267958 D 536230 CDS YP_002895038.1 237810587 7889000 269376..270161 1 NC_012695.1 hypothetical protein 270161 7889000 GBP346_A0312 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895038.1 269376 D 536230 CDS YP_002895039.1 237810588 7888173 complement(270149..270337) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 270337 7888173 GBP346_A0311 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895039.1 270149 R 536230 CDS YP_002895040.1 237810589 7886770 270538..271251 1 NC_012695.1 identified by match to protein family HMM PF03932; CutC family protein 271251 7886770 GBP346_A0313 Burkholderia pseudomallei MSHR346 CutC family protein YP_002895040.1 270538 D 536230 CDS YP_002895041.1 237810590 7888162 complement(271378..272388) 1 NC_012695.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase 272388 bioB 7888162 bioB Burkholderia pseudomallei MSHR346 biotin synthase YP_002895041.1 271378 R 536230 CDS YP_002895042.1 237810591 7886949 complement(272461..273183) 1 NC_012695.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 273183 bioD 7886949 bioD Burkholderia pseudomallei MSHR346 dithiobiotin synthetase YP_002895042.1 272461 R 536230 CDS YP_002895043.1 237810592 7886697 complement(273180..274364) 1 NC_012695.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 274364 bioF 7886697 bioF Burkholderia pseudomallei MSHR346 8-amino-7-oxononanoate synthase YP_002895043.1 273180 R 536230 CDS YP_002895044.1 237810593 7887829 complement(274361..275707) 1 NC_012695.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 275707 bioA 7887829 bioA Burkholderia pseudomallei MSHR346 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_002895044.1 274361 R 536230 CDS YP_002895045.1 237810594 7888658 275696..275833 1 NC_012695.1 hypothetical protein 275833 7888658 GBP346_A0318 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895045.1 275696 D 536230 CDS YP_002895046.1 237810595 7889390 complement(276271..277599) 1 NC_012695.1 hypothetical protein 277599 7889390 GBP346_A0319 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895046.1 276271 R 536230 CDS YP_002895047.1 237810596 7888154 complement(277763..278215) 1 NC_012695.1 hypothetical protein 278215 7888154 GBP346_A0320 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895047.1 277763 R 536230 CDS YP_002895048.1 237810597 7886963 complement(278247..278468) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; short chain dehydrogenase 278468 7886963 GBP346_A0321 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002895048.1 278247 R 536230 CDS YP_002895049.1 237810598 7886958 complement(278493..278924) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00106; short chain dehydrogenase 278924 7886958 GBP346_A0322 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002895049.1 278493 R 536230 CDS YP_002895050.1 237810599 7889667 complement(278955..280148) 1 NC_012695.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 280148 7889667 GBP346_A0323 Burkholderia pseudomallei MSHR346 acetyl-CoA acetyltransferase YP_002895050.1 278955 R 536230 CDS YP_002895051.1 237810600 7890443 complement(280135..280905) 1 NC_012695.1 identified by match to protein family HMM PF00484; carbonic anhydrase 2 (Carbonate dehydratase 2) 280905 7890443 GBP346_A0324 Burkholderia pseudomallei MSHR346 carbonic anhydrase 2 (Carbonate dehydratase 2) YP_002895051.1 280135 R 536230 CDS YP_002895052.1 237810601 7888277 complement(280963..282804) 1 NC_012695.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 282804 aceK 7888277 aceK Burkholderia pseudomallei MSHR346 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_002895052.1 280963 R 536230 CDS YP_002895053.1 237810602 7890514 complement(282801..282992) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 282992 7890514 GBP346_A0326 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895053.1 282801 R 536230 CDS YP_002895054.1 237810603 7889941 283063..284142 1 NC_012695.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 284142 7889941 GBP346_A0327 Burkholderia pseudomallei MSHR346 metallo-beta-lactamase family protein YP_002895054.1 283063 D 536230 CDS YP_002895055.1 237810604 7888081 complement(284429..286075) 1 NC_012695.1 identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein 286075 7888081 GBP346_A0328 Burkholderia pseudomallei MSHR346 peptide ABC transporter, ATP-binding protein YP_002895055.1 284429 R 536230 CDS YP_002895056.1 237810605 7890030 complement(286309..287895) 1 NC_012695.1 identified by match to protein family HMM PF00496; periplasmic dipeptide transport protein 287895 7890030 GBP346_A0329 Burkholderia pseudomallei MSHR346 periplasmic dipeptide transport protein YP_002895056.1 286309 R 536230 CDS YP_002895057.1 237810606 7886807 complement(287993..288676) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 288676 7886807 GBP346_A0330 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895057.1 287993 R 536230 CDS YP_002895058.1 237810607 7889087 complement(288872..289360) 1 NC_012695.1 identified by match to protein family HMM PF01047; MarR family regulatory protein 289360 7889087 GBP346_A0331 Burkholderia pseudomallei MSHR346 MarR family regulatory protein YP_002895058.1 288872 R 536230 CDS YP_002895059.1 237810608 7888817 complement(289341..289469) 1 NC_012695.1 hypothetical protein 289469 7888817 GBP346_A0332 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895059.1 289341 R 536230 CDS YP_002895060.1 237810609 7890896 289560..290291 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 290291 7890896 GBP346_A0333 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002895060.1 289560 D 536230 CDS YP_002895061.1 237810610 7887872 complement(290444..291223) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 291223 7887872 GBP346_A0334 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002895061.1 290444 R 536230 CDS YP_002895062.1 237810611 7887132 complement(291240..291878) 1 NC_012695.1 identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA 291878 7887132 GBP346_A0335 Burkholderia pseudomallei MSHR346 thiol:disulfide interchange protein DsbA YP_002895062.1 291240 R 536230 CDS YP_002895063.1 237810612 7889462 complement(291930..292790) 1 NC_012695.1 identified by match to protein family HMM PF05036; cell division protein 292790 7889462 GBP346_A0336 Burkholderia pseudomallei MSHR346 cell division protein YP_002895063.1 291930 R 536230 CDS YP_002895064.1 237810613 7888889 complement(292857..294641) 1 NC_012695.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 294641 argS 7888889 argS Burkholderia pseudomallei MSHR346 arginyl-tRNA synthetase YP_002895064.1 292857 R 536230 CDS YP_002895065.1 237810614 7889448 294621..294740 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 294740 7889448 GBP346_A0338 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895065.1 294621 D 536230 CDS YP_002895066.1 237810615 7888775 294844..295167 1 NC_012695.1 identified by match to protein family HMM PF08895; hypothetical protein 295167 7888775 GBP346_A0339 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895066.1 294844 D 536230 CDS YP_002895067.1 237810616 7890622 complement(295411..298128) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02607; match to protein family HMM PF02965; match to protein family HMM TIGR02082; methionine synthase 298128 metH 7890622 metH Burkholderia pseudomallei MSHR346 methionine synthase YP_002895067.1 295411 R 536230 CDS YP_002895068.1 237810617 7888736 complement(298174..299253) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF02574; homocysteine S-methyltransferase 299253 7888736 GBP346_A0341 Burkholderia pseudomallei MSHR346 homocysteine S-methyltransferase YP_002895068.1 298174 R 536230 CDS YP_002895069.1 237810618 7887515 complement(299441..299698) 1 NC_012695.1 hypothetical protein 299698 7887515 GBP346_A0342 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895069.1 299441 R 536230 CDS YP_002895070.1 237810619 7890056 complement(299881..301188) 1 NC_012695.1 hypothetical protein 301188 7890056 GBP346_A0343 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895070.1 299881 R 536230 CDS YP_002895071.1 237810620 7888914 complement(301267..302220) 1 NC_012695.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 302220 7888914 GBP346_A0344 Burkholderia pseudomallei MSHR346 transcriptional regulator, IclR family YP_002895071.1 301267 R 536230 CDS YP_002895072.1 237810621 7887074 302240..303232 1 NC_012695.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein 303232 7887074 GBP346_A0345 Burkholderia pseudomallei MSHR346 fumarylacetoacetate hydrolase family protein YP_002895072.1 302240 D 536230 CDS YP_002895073.1 237810622 7890671 303229..303360 1 NC_012695.1 hypothetical protein 303360 7890671 GBP346_A0346 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895073.1 303229 D 536230 CDS YP_002895074.1 237810623 7886871 303440..304267 1 NC_012695.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 304267 7886871 GBP346_A0347 Burkholderia pseudomallei MSHR346 enoyl-CoA hydratase YP_002895074.1 303440 D 536230 CDS YP_002895075.1 237810624 7888518 304357..305148 1 NC_012695.1 hypothetical protein 305148 7888518 GBP346_A0348 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895075.1 304357 D 536230 CDS YP_002895076.1 237810625 7886894 305185..306429 1 NC_012695.1 identified by match to protein family HMM PF01734; phospholipase, patatin family 306429 7886894 GBP346_A0349 Burkholderia pseudomallei MSHR346 phospholipase, patatin family YP_002895076.1 305185 D 536230 CDS YP_002895077.1 237810626 7890058 306496..306678 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 306678 7890058 GBP346_A0350 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895077.1 306496 D 536230 CDS YP_002895078.1 237810627 7887396 complement(306785..306928) 1 NC_012695.1 hypothetical protein 306928 7887396 GBP346_A0351 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895078.1 306785 R 536230 CDS YP_002895079.1 237810628 7887027 307096..307962 1 NC_012695.1 hypothetical protein 307962 7887027 GBP346_A0352 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895079.1 307096 D 536230 CDS YP_002895080.1 237810629 7890754 308103..308588 1 NC_012695.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02199; bifunctional protein RfaE, domain II 308588 rfaE_1 7890754 rfaE_1 Burkholderia pseudomallei MSHR346 bifunctional protein RfaE, domain II YP_002895080.1 308103 D 536230 CDS YP_002895081.1 237810630 7888389 complement(308634..309044) 1 NC_012695.1 hypothetical protein 309044 7888389 GBP346_A0354 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895081.1 308634 R 536230 CDS YP_002895082.1 237810631 7887751 complement(309148..309918) 1 NC_012695.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 309918 7887751 GBP346_A0355 Burkholderia pseudomallei MSHR346 pantothenate kinase YP_002895082.1 309148 R 536230 CDS YP_002895083.1 237810632 7889846 complement(309924..311003) 1 NC_012695.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 311003 7889846 GBP346_A0356 Burkholderia pseudomallei MSHR346 biotin--protein ligase YP_002895083.1 309924 R 536230 CDS YP_002895084.1 237810633 7889598 complement(311275..312162) 1 NC_012695.1 identified by match to protein family HMM PF08238; Sel1 repeat family protein 312162 7889598 GBP346_A0357 Burkholderia pseudomallei MSHR346 Sel1 repeat family protein YP_002895084.1 311275 R 536230 CDS YP_002895085.1 237810634 7890901 complement(312236..314296) 1 NC_012695.1 identified by match to protein family HMM PF00149; match to protein family HMM PF02872; putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase 314296 7890901 GBP346_A0358 Burkholderia pseudomallei MSHR346 putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_002895085.1 312236 R 536230 CDS YP_002895086.1 237810635 7888215 314562..315686 1 NC_012695.1 identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; putative ABC transporter, permease protein 315686 7888215 GBP346_A0359 Burkholderia pseudomallei MSHR346 putative ABC transporter, permease protein YP_002895086.1 314562 D 536230 CDS YP_002895087.1 237810636 7889270 315683..316525 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 316525 7889270 GBP346_A0360 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895087.1 315683 D 536230 CDS YP_002895088.1 237810637 7887231 316549..317478 1 NC_012695.1 identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein 317478 7887231 GBP346_A0361 Burkholderia pseudomallei MSHR346 ABC transporter, periplasmic substrate-binding protein YP_002895088.1 316549 D 536230 CDS YP_002895089.1 237810638 7890528 317497..318135 1 NC_012695.1 hypothetical protein 318135 7890528 GBP346_A0362 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895089.1 317497 D 536230 CDS YP_002895090.1 237810639 7888963 318167..319378 1 NC_012695.1 identified by match to protein family HMM PF04892; VanZ like protein 319378 7888963 GBP346_A0363 Burkholderia pseudomallei MSHR346 VanZ like protein YP_002895090.1 318167 D 536230 CDS YP_002895091.1 237810640 7889104 319484..319813 1 NC_012695.1 ferredoxin family protein 319813 7889104 GBP346_A0364 Burkholderia pseudomallei MSHR346 ferredoxin family protein YP_002895091.1 319484 D 536230 CDS YP_002895092.1 237810641 7888583 319860..320504 1 NC_012695.1 alpha/beta hydrolase family protein 320504 7888583 GBP346_A0365 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002895092.1 319860 D 536230 CDS YP_002895093.1 237810642 7890082 321280..322593 1 NC_012695.1 identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase DacC 322593 7890082 GBP346_A0366 Burkholderia pseudomallei MSHR346 D-alanyl-D-alanine carboxypeptidase DacC YP_002895093.1 321280 D 536230 CDS YP_002895094.1 237810643 7886836 322683..323630 1 NC_012695.1 identified by match to protein family HMM PF01063; D-amino-acid transaminase 323630 7886836 GBP346_A0367 Burkholderia pseudomallei MSHR346 D-amino-acid transaminase YP_002895094.1 322683 D 536230 CDS YP_002895095.1 237810644 7887381 323627..323935 1 NC_012695.1 identified by match to protein family HMM PF04359; hypothetical protein 323935 7887381 GBP346_A0368 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895095.1 323627 D 536230 CDS YP_002895096.1 237810645 7890023 complement(323946..324911) 1 NC_012695.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 324911 7890023 GBP346_A0369 Burkholderia pseudomallei MSHR346 DNA-binding transcriptional activator GcvA YP_002895096.1 323946 R 536230 CDS YP_002895097.1 237810646 7889008 325012..325338 1 NC_012695.1 hypothetical protein 325338 7889008 GBP346_A0370 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895097.1 325012 D 536230 CDS YP_002895098.1 237810647 7890481 325431..326171 1 NC_012695.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 326171 lipB 7890481 lipB Burkholderia pseudomallei MSHR346 lipoate-protein ligase B YP_002895098.1 325431 D 536230 CDS YP_002895099.1 237810648 7888266 326164..327153 1 NC_012695.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 327153 lipA 7888266 lipA Burkholderia pseudomallei MSHR346 lipoyl synthase YP_002895099.1 326164 D 536230 CDS YP_002895100.1 237810649 7890543 327189..327386 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 327386 7890543 GBP346_A0374 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895100.1 327189 D 536230 CDS YP_002895101.1 237810650 7887219 complement(327338..327610) 1 NC_012695.1 NADPH:quinone reductase 327610 7887219 GBP346_A0373 Burkholderia pseudomallei MSHR346 NADPH:quinone reductase YP_002895101.1 327338 R 536230 CDS YP_002895102.1 237810651 7890784 complement(327738..329621) 1 NC_012695.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 329621 ggt_1 7890784 ggt_1 Burkholderia pseudomallei MSHR346 gamma-glutamyltransferase YP_002895102.1 327738 R 536230 CDS YP_002895103.1 237810652 7889314 329943..330218 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 330218 7889314 GBP346_A0376 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895103.1 329943 D 536230 CDS YP_002895104.1 237810653 7890072 330404..330745 1 NC_012695.1 hypothetical protein 330745 7890072 GBP346_A0377 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895104.1 330404 D 536230 CDS YP_002895105.1 237810654 7890816 complement(330870..331772) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 331772 7890816 GBP346_A0378 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895105.1 330870 R 536230 CDS YP_002895106.1 237810655 7887076 331927..334053 1 NC_012695.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; match to protein family HMM PF03446; peroxisomal bifunctional enzyme 334053 7887076 GBP346_A0379 Burkholderia pseudomallei MSHR346 peroxisomal bifunctional enzyme YP_002895106.1 331927 D 536230 CDS YP_002895107.1 237810656 7889138 334108..335316 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 335316 7889138 GBP346_A0380 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase YP_002895107.1 334108 D 536230 CDS YP_002895108.1 237810657 7887277 335326..336456 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 336456 7887277 GBP346_A0381 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002895108.1 335326 D 536230 CDS YP_002895109.1 237810658 7890244 336482..337687 1 NC_012695.1 identified by match to protein family HMM PF02515; caib/baif family protein 337687 7890244 GBP346_A0382 Burkholderia pseudomallei MSHR346 caib/baif family protein YP_002895109.1 336482 D 536230 CDS YP_002895110.1 237810659 7887619 338064..338369 1 NC_012695.1 identified by match to protein family HMM PF04341; hypothetical protein 338369 7887619 GBP346_A0383 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895110.1 338064 D 536230 CDS YP_002895111.1 237810660 7890709 338381..340096 1 NC_012695.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 340096 actP 7890709 actP Burkholderia pseudomallei MSHR346 acetate permease YP_002895111.1 338381 D 536230 CDS YP_002895112.1 237810661 7888910 340464..341750 1 NC_012695.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 341750 dctA 7888910 dctA Burkholderia pseudomallei MSHR346 C4-dicarboxylate transporter DctA YP_002895112.1 340464 D 536230 CDS YP_002895113.1 237810662 7890483 341753..343786 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; C4-dicarboxylate transport sensor histidine kinase DctB 343786 7890483 GBP346_A0386 Burkholderia pseudomallei MSHR346 C4-dicarboxylate transport sensor histidine kinase DctB YP_002895113.1 341753 D 536230 CDS YP_002895114.1 237810663 7886801 343835..345190 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; C4-dicarboxylate transport transcriptional regulatory protein DctD 345190 7886801 GBP346_A0387 Burkholderia pseudomallei MSHR346 C4-dicarboxylate transport transcriptional regulatory protein DctD YP_002895114.1 343835 D 536230 CDS YP_002895115.1 237810664 7888791 complement(345306..345842) 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; redoxin domain protein 345842 7888791 GBP346_A0388 Burkholderia pseudomallei MSHR346 redoxin domain protein YP_002895115.1 345306 R 536230 CDS YP_002895116.1 237810665 7889472 345916..346725 1 NC_012695.1 hypothetical protein 346725 7889472 GBP346_A0389 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895116.1 345916 D 536230 CDS YP_002895117.1 237810666 7887281 347265..347417 1 NC_012695.1 hypothetical protein 347417 7887281 GBP346_A0391 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895117.1 347265 D 536230 CDS YP_002895118.1 237810667 7889921 complement(347412..348191) 1 NC_012695.1 identified by match to protein family HMM PF00975; thioesterase domain protein 348191 7889921 GBP346_A0390 Burkholderia pseudomallei MSHR346 thioesterase domain protein YP_002895118.1 347412 R 536230 CDS YP_002895119.1 237810668 7889796 complement(348209..348637) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 348637 7889796 GBP346_A0392 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895119.1 348209 R 536230 CDS YP_002895120.1 237810669 7889584 348692..349156 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 349156 7889584 GBP346_A0393 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002895120.1 348692 D 536230 CDS YP_002895121.1 237810670 7886847 349178..349297 1 NC_012695.1 hypothetical protein 349297 7886847 GBP346_A0394 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895121.1 349178 D 536230 CDS YP_002895122.1 237810671 7888120 complement(349585..351171) 1 NC_012695.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; putative Mg chelatase family protein 351171 7888120 GBP346_A0395 Burkholderia pseudomallei MSHR346 putative Mg chelatase family protein YP_002895122.1 349585 R 536230 CDS YP_002895123.1 237810672 7888990 complement(351309..351560) 1 NC_012695.1 identified by match to protein family HMM PF04380; hypothetical protein 351560 7888990 GBP346_A0396 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895123.1 351309 R 536230 CDS YP_002895124.1 237810673 7887445 351929..352267 1 NC_012695.1 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 352267 7887445 GBP346_A0397 Burkholderia pseudomallei MSHR346 nitrogen regulatory protein P-II YP_002895124.1 351929 D 536230 CDS YP_002895125.1 237810674 7887559 352300..353802 1 NC_012695.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 353802 amt 7887559 amt Burkholderia pseudomallei MSHR346 ammonium transporter YP_002895125.1 352300 D 536230 CDS YP_002895126.1 237810675 7888782 354161..355450 1 NC_012695.1 identified by match to protein family HMM PF08886; match to protein family HMM TIGR02049; glutamate--cysteine ligase 355450 gshA_2 7888782 gshA_2 Burkholderia pseudomallei MSHR346 glutamate--cysteine ligase YP_002895126.1 354161 D 536230 CDS YP_002895127.1 237810676 7890247 355478..356434 1 NC_012695.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 356434 gshB 7890247 gshB Burkholderia pseudomallei MSHR346 glutathione synthetase YP_002895127.1 355478 D 536230 CDS YP_002895128.1 237810677 7888265 356607..357080 1 NC_012695.1 identified by match to protein family HMM PF03610; PTS system, fructose-specific IIA component 357080 7888265 GBP346_A0401 Burkholderia pseudomallei MSHR346 PTS system, fructose-specific IIA component YP_002895128.1 356607 D 536230 CDS YP_002895129.1 237810678 7888686 357157..357426 1 NC_012695.1 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 357426 ptsH 7888686 ptsH Burkholderia pseudomallei MSHR346 phosphocarrier protein HPr YP_002895129.1 357157 D 536230 CDS YP_002895130.1 237810679 7888158 357604..359394 1 NC_012695.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 359394 ptsP 7888158 ptsP Burkholderia pseudomallei MSHR346 phosphoenolpyruvate-protein phosphotransferase YP_002895130.1 357604 D 536230 CDS YP_002895131.1 237810680 7887552 359457..359657 1 NC_012695.1 hypothetical protein 359657 7887552 GBP346_A0404 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895131.1 359457 D 536230 CDS YP_002895132.1 237810681 7890438 complement(359682..360440) 1 NC_012695.1 identified by match to protein family HMM PF00899; match to protein family HMM PF05237; HesA/MoeB/ThiF family protein 360440 7890438 GBP346_A0405 Burkholderia pseudomallei MSHR346 HesA/MoeB/ThiF family protein YP_002895132.1 359682 R 536230 CDS YP_002895133.1 237810682 7887762 complement(360545..362119) 1 NC_012695.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxy- protease 362119 7887762 GBP346_A0406 Burkholderia pseudomallei MSHR346 carboxy- protease YP_002895133.1 360545 R 536230 CDS YP_002895134.1 237810683 7889534 complement(362340..363089) 1 NC_012695.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 363089 gpmA 7889534 gpmA Burkholderia pseudomallei MSHR346 phosphoglyceromutase YP_002895134.1 362340 R 536230 CDS YP_002895135.1 237810684 7887458 363223..363630 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF00581; rhodanese domain protein 363630 7887458 GBP346_A0408 Burkholderia pseudomallei MSHR346 rhodanese domain protein YP_002895135.1 363223 D 536230 CDS YP_002895136.1 237810685 7888954 363642..363902 1 NC_012695.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR02181; glutaredoxin 3 363902 grxC 7888954 grxC Burkholderia pseudomallei MSHR346 glutaredoxin 3 YP_002895136.1 363642 D 536230 CDS YP_002895137.1 237810686 7889300 364019..364498 1 NC_012695.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 364498 secB 7889300 secB Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecB YP_002895137.1 364019 D 536230 CDS YP_002895138.1 237810687 7886934 364515..365522 1 NC_012695.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 365522 gpsA 7886934 gpsA Burkholderia pseudomallei MSHR346 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002895138.1 364515 D 536230 CDS YP_002895139.1 237810688 7888571 365642..366208 1 NC_012695.1 identified by match to protein family HMM PF01661; appr-1-p processing enzyme family domain protein 366208 7888571 GBP346_A0412 Burkholderia pseudomallei MSHR346 appr-1-p processing enzyme family domain protein YP_002895139.1 365642 D 536230 CDS YP_002895140.1 237810689 7887213 complement(366639..367178) 1 NC_012695.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; RNA methyltransferase, TrmH family, group 2 367178 7887213 GBP346_A0413 Burkholderia pseudomallei MSHR346 RNA methyltransferase, TrmH family, group 2 YP_002895140.1 366639 R 536230 CDS YP_002895141.1 237810690 7889094 complement(367175..367942) 1 NC_012695.1 ComF family protein 367942 7889094 GBP346_A0414 Burkholderia pseudomallei MSHR346 ComF family protein YP_002895141.1 367175 R 536230 CDS YP_002895142.1 237810691 7890327 367975..368991 1 NC_012695.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase type 11 368991 7890327 GBP346_A0415 Burkholderia pseudomallei MSHR346 methyltransferase type 11 YP_002895142.1 367975 D 536230 CDS YP_002895143.1 237810692 7886715 369228..369704 1 NC_012695.1 hypothetical protein 369704 7886715 GBP346_A0416 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895143.1 369228 D 536230 CDS YP_002895144.1 237810693 7887274 369754..371331 1 NC_012695.1 identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM PF00691; match to protein family HMM PF02790; match to protein family HMM TIGR02866; cytochrome c oxidase, subunit II 371331 7887274 GBP346_A0417 Burkholderia pseudomallei MSHR346 cytochrome c oxidase, subunit II YP_002895144.1 369754 D 536230 CDS YP_002895145.1 237810694 7889057 371375..372982 1 NC_012695.1 identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891; cytochrome c oxidase, subunit I 372982 ctaD_1 7889057 ctaD_1 Burkholderia pseudomallei MSHR346 cytochrome c oxidase, subunit I YP_002895145.1 371375 D 536230 CDS YP_002895146.1 237810695 7888682 373006..373191 1 NC_012695.1 hypothetical protein 373191 7888682 GBP346_A0419 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895146.1 373006 D 536230 CDS YP_002895147.1 237810696 7889362 373213..373818 1 NC_012695.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 373818 7889362 GBP346_A0420 Burkholderia pseudomallei MSHR346 cytochrome C oxidase assembly protein YP_002895147.1 373213 D 536230 CDS YP_002895148.1 237810697 7889449 373835..374038 1 NC_012695.1 hypothetical protein 374038 7889449 GBP346_A0421 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895148.1 373835 D 536230 CDS YP_002895149.1 237810698 7890194 374172..375029 1 NC_012695.1 identified by match to protein family HMM PF00510; cytochrome c oxidase subunit III 375029 7890194 GBP346_A0422 Burkholderia pseudomallei MSHR346 cytochrome c oxidase subunit III YP_002895149.1 374172 D 536230 CDS YP_002895150.1 237810699 7887110 complement(375189..375440) 1 NC_012695.1 hypothetical protein 375440 7887110 GBP346_A0423 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895150.1 375189 R 536230 CDS YP_002895151.1 237810700 7890529 375486..376199 1 NC_012695.1 surf1 family protein 376199 7890529 GBP346_A0424 Burkholderia pseudomallei MSHR346 surf1 family protein YP_002895151.1 375486 D 536230 CDS YP_002895152.1 237810701 7887558 376348..376905 1 NC_012695.1 hypothetical protein 376905 7887558 GBP346_A0425 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895152.1 376348 D 536230 CDS YP_002895153.1 237810702 7889241 376949..378058 1 NC_012695.1 identified by match to protein family HMM PF02628; cytochrome oxidase assembly protein 378058 7889241 GBP346_A0426 Burkholderia pseudomallei MSHR346 cytochrome oxidase assembly protein YP_002895153.1 376949 D 536230 CDS YP_002895154.1 237810703 7890165 378071..378973 1 NC_012695.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 378973 cyoE 7890165 cyoE Burkholderia pseudomallei MSHR346 protoheme IX farnesyltransferase YP_002895154.1 378071 D 536230 CDS YP_002895155.1 237810704 7887734 378993..379610 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF02630; SCO1/SenC family protein 379610 7887734 GBP346_A0428 Burkholderia pseudomallei MSHR346 SCO1/SenC family protein YP_002895155.1 378993 D 536230 CDS YP_002895156.1 237810705 7889353 complement(379690..379983) 1 NC_012695.1 identified by match to protein family HMM PF03795; YCII-related domain superfamily protein 379983 7889353 GBP346_A0429 Burkholderia pseudomallei MSHR346 YCII-related domain superfamily protein YP_002895156.1 379690 R 536230 CDS YP_002895157.1 237810706 7887414 380170..381810 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF08269; methyl-accepting chemotaxis protein 381810 7887414 GBP346_A0430 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002895157.1 380170 D 536230 CDS YP_002895158.1 237810707 7886943 381807..381959 1 NC_012695.1 hypothetical protein 381959 7886943 GBP346_A0431 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895158.1 381807 D 536230 CDS YP_002895159.1 237810708 7887161 381960..382778 1 NC_012695.1 identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; D-methionine-binding lipoprotein MetQ 382778 7887161 GBP346_A0432 Burkholderia pseudomallei MSHR346 D-methionine-binding lipoprotein MetQ YP_002895159.1 381960 D 536230 CDS YP_002895160.1 237810709 7888920 383029..384000 1 NC_012695.1 identified by match to protein family HMM PF04392; ABC-type transporter, periplasmic component 384000 7888920 GBP346_A0433 Burkholderia pseudomallei MSHR346 ABC-type transporter, periplasmic component YP_002895160.1 383029 D 536230 CDS YP_002895161.1 237810710 7889706 384319..385215 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, permease protein 385215 7889706 GBP346_A0434 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002895161.1 384319 D 536230 CDS YP_002895162.1 237810711 7888369 385216..386010 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 386010 7888369 GBP346_A0435 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895162.1 385216 D 536230 CDS YP_002895163.1 237810712 7887189 386217..386927 1 NC_012695.1 hypothetical protein 386927 7887189 GBP346_A0436 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895163.1 386217 D 536230 CDS YP_002895164.1 237810713 7887026 386905..388335 1 NC_012695.1 hypothetical protein 388335 7887026 GBP346_A0437 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895164.1 386905 D 536230 CDS YP_002895165.1 237810714 7887486 388341..391571 1 NC_012695.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 391571 dnaE2 7887486 dnaE2 Burkholderia pseudomallei MSHR346 error-prone DNA polymerase YP_002895165.1 388341 D 536230 CDS YP_002895166.1 237810715 7889841 complement(391864..392685) 1 NC_012695.1 hypothetical protein 392685 7889841 GBP346_A0439 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895166.1 391864 R 536230 CDS YP_002895167.1 237810716 7888787 complement(392729..393922) 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 393922 7888787 GBP346_A0440 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895167.1 392729 R 536230 CDS YP_002895168.1 237810717 7888053 393909..394169 1 NC_012695.1 hypothetical protein 394169 7888053 GBP346_A0442 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895168.1 393909 D 536230 CDS YP_002895169.1 237810718 7889659 complement(394124..395125) 1 NC_012695.1 identified by match to protein family HMM PF00487; fatty acid desaturase family protein 395125 7889659 GBP346_A0441 Burkholderia pseudomallei MSHR346 fatty acid desaturase family protein YP_002895169.1 394124 R 536230 CDS YP_002895170.1 237810719 7888127 complement(395201..396553) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00202; match to protein family HMM TIGR00709; diaminobutyrate--2-oxoglutarate transaminase 396553 7888127 GBP346_A0443 Burkholderia pseudomallei MSHR346 diaminobutyrate--2-oxoglutarate transaminase YP_002895170.1 395201 R 536230 CDS YP_002895171.1 237810720 7890815 complement(396598..397131) 1 NC_012695.1 hypothetical protein 397131 7890815 GBP346_A0444 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895171.1 396598 R 536230 CDS YP_002895172.1 237810721 7888590 complement(397206..398297) 1 NC_012695.1 identified by match to protein family HMM PF01061; ABC-2 type transporter, permease protein 398297 7888590 GBP346_A0445 Burkholderia pseudomallei MSHR346 ABC-2 type transporter, permease protein YP_002895172.1 397206 R 536230 CDS YP_002895173.1 237810722 7889793 complement(398290..399333) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 399333 7889793 GBP346_A0446 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895173.1 398290 R 536230 CDS YP_002895174.1 237810723 7889109 complement(399339..400406) 1 NC_012695.1 identified by match to protein family HMM PF02668; taurine catabolism dioxygenase TauD/TfdA 400406 7889109 GBP346_A0447 Burkholderia pseudomallei MSHR346 taurine catabolism dioxygenase TauD/TfdA YP_002895174.1 399339 R 536230 CDS YP_002895175.1 237810724 7887109 complement(400403..401068) 1 NC_012695.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase, UbiE/COQ5 family 401068 7887109 GBP346_A0448 Burkholderia pseudomallei MSHR346 methyltransferase, UbiE/COQ5 family YP_002895175.1 400403 R 536230 CDS YP_002895176.1 237810725 7890503 complement(401108..402259) 1 NC_012695.1 identified by match to protein family HMM PF00285; citrate synthase-related protein 402259 7890503 GBP346_A0449 Burkholderia pseudomallei MSHR346 citrate synthase-related protein YP_002895176.1 401108 R 536230 CDS YP_002895177.1 237810726 7887455 complement(402261..404132) 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 404132 7887455 GBP346_A0450 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002895177.1 402261 R 536230 CDS YP_002895178.1 237810727 7887538 complement(404129..405169) 1 NC_012695.1 identified by match to protein family HMM PF08541; 3-oxoacyl-[acyl-carrier-protein] synthase III 405169 7887538 GBP346_A0451 Burkholderia pseudomallei MSHR346 3-oxoacyl-[acyl-carrier-protein] synthase III YP_002895178.1 404129 R 536230 CDS YP_002895179.1 237810728 7889523 complement(405187..406755) 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM TIGR03098; acyl-CoA ligase (AMP-forming), exosortase system type 1 associated 406755 7889523 GBP346_A0452 Burkholderia pseudomallei MSHR346 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated YP_002895179.1 405187 R 536230 CDS YP_002895180.1 237810729 7888635 complement(406763..407959) 1 NC_012695.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; pyridoxal-dependent decarboxylase family protein 407959 7888635 GBP346_A0453 Burkholderia pseudomallei MSHR346 pyridoxal-dependent decarboxylase family protein YP_002895180.1 406763 R 536230 CDS YP_002895181.1 237810730 7890865 complement(407949..408947) 1 NC_012695.1 hypothetical protein 408947 7890865 GBP346_A0454 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895181.1 407949 R 536230 CDS YP_002895182.1 237810731 7887713 complement(408952..409935) 1 NC_012695.1 hypothetical protein 409935 7887713 GBP346_A0455 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895182.1 408952 R 536230 CDS YP_002895183.1 237810732 7890164 complement(409954..410520) 1 NC_012695.1 hypothetical protein 410520 7890164 GBP346_A0456 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895183.1 409954 R 536230 CDS YP_002895184.1 237810733 7889611 complement(410517..411404) 1 NC_012695.1 hypothetical protein 411404 7889611 GBP346_A0457 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895184.1 410517 R 536230 CDS YP_002895185.1 237810734 7890317 complement(411437..411685) 1 NC_012695.1 phosphopantetheine-binding 411685 7890317 GBP346_A0458 Burkholderia pseudomallei MSHR346 phosphopantetheine-binding YP_002895185.1 411437 R 536230 CDS YP_002895186.1 237810735 7887773 complement(411741..412859) 1 NC_012695.1 hypothetical protein 412859 7887773 GBP346_A0459 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895186.1 411741 R 536230 CDS YP_002895187.1 237810736 7888894 complement(412939..414705) 1 NC_012695.1 identified by match to protein family HMM PF00501; AMP-binding domain protein 414705 7888894 GBP346_A0460 Burkholderia pseudomallei MSHR346 AMP-binding domain protein YP_002895187.1 412939 R 536230 CDS YP_002895188.1 237810737 7887421 415139..416062 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 416062 7887421 GBP346_A0461 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895188.1 415139 D 536230 CDS YP_002895189.1 237810738 7888617 416805..417539 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; transcriptional regulator, GntR family 417539 7888617 GBP346_A0462 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002895189.1 416805 D 536230 CDS YP_002895190.1 237810739 7889935 417638..418741 1 NC_012695.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 418741 nagA 7889935 nagA Burkholderia pseudomallei MSHR346 N-acetylglucosamine-6-phosphate deacetylase YP_002895190.1 417638 D 536230 CDS YP_002895191.1 237810740 7890071 418725..419741 1 NC_012695.1 identified by match to protein family HMM PF01380; SIS domain protein 419741 7890071 GBP346_A0464 Burkholderia pseudomallei MSHR346 SIS domain protein YP_002895191.1 418725 D 536230 CDS YP_002895192.1 237810741 7886722 419799..422387 1 NC_012695.1 identified by match to protein family HMM PF00358; match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR00830; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; pts system, glucose-glucoside (glc) family eiia/phosphocarrier hpr/phosphoenolpyruvate-protein phosphotransferase component 422387 7886722 GBP346_A0465 Burkholderia pseudomallei MSHR346 pts system, glucose-glucoside (glc) family eiia/phosphocarrier hpr/phosphoenolpyruvate-protein phosphotransferase component YP_002895192.1 419799 D 536230 CDS YP_002895193.1 237810742 7889652 422500..424260 1 NC_012695.1 identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998; pts system, N-acetylglucosamine-specific iibc component 424260 nagE 7889652 nagE Burkholderia pseudomallei MSHR346 pts system, N-acetylglucosamine-specific iibc component YP_002895193.1 422500 D 536230 CDS YP_002895194.1 237810743 7886975 complement(424946..427447) 1 NC_012695.1 identified by match to protein family HMM PF00728; match to protein family HMM PF03173; chitobiase 427447 7886975 GBP346_A0467 Burkholderia pseudomallei MSHR346 chitobiase YP_002895194.1 424946 R 536230 CDS YP_002895195.1 237810744 7887273 complement(427658..427918) 1 NC_012695.1 hypothetical protein 427918 7887273 GBP346_A0468 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895195.1 427658 R 536230 CDS YP_002895196.1 237810745 7890027 complement(428162..428338) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 428338 7890027 GBP346_A0469 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895196.1 428162 R 536230 CDS YP_002895197.1 237810746 7888688 complement(428335..428757) 1 NC_012695.1 hypothetical protein 428757 7888688 GBP346_A0470 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895197.1 428335 R 536230 CDS YP_002895198.1 237810747 7888297 complement(428785..428955) 1 NC_012695.1 identified by match to protein family HMM PF08173; match to protein family HMM TIGR02106; hypothetical protein 428955 7888297 GBP346_A0471 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895198.1 428785 R 536230 CDS YP_002895199.1 237810748 7887384 complement(428974..430110) 1 NC_012695.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome D ubiquinol oxidase, subunit II 430110 cydB_1 7887384 cydB_1 Burkholderia pseudomallei MSHR346 cytochrome D ubiquinol oxidase, subunit II YP_002895199.1 428974 R 536230 CDS YP_002895200.1 237810749 7890220 complement(430148..431743) 1 NC_012695.1 identified by match to protein family HMM PF01654; cytochrome D ubiquinol oxidase, subunit I 431743 cydA 7890220 cydA Burkholderia pseudomallei MSHR346 cytochrome D ubiquinol oxidase, subunit I YP_002895200.1 430148 R 536230 CDS YP_002895201.1 237810750 7887399 complement(431733..432017) 1 NC_012695.1 hypothetical protein 432017 7887399 GBP346_A0474 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895201.1 431733 R 536230 CDS YP_002895202.1 237810751 7888491 complement(432496..433431) 1 NC_012695.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 433431 rpoH 7888491 rpoH Burkholderia pseudomallei MSHR346 RNA polymerase factor sigma-32 YP_002895202.1 432496 R 536230 CDS YP_002895203.1 237810752 7889882 complement(433629..433748) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 433748 7889882 GBP346_A0476 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895203.1 433629 R 536230 CDS YP_002895204.1 237810753 7890932 433754..434365 1 NC_012695.1 identified by match to protein family HMM PF09411; lipid A 3-O-deacylase (PagL) superfamily 434365 7890932 GBP346_A0477 Burkholderia pseudomallei MSHR346 lipid A 3-O-deacylase (PagL) superfamily YP_002895204.1 433754 D 536230 CDS YP_002895205.1 237810754 7888260 434407..434793 1 NC_012695.1 identified by match to protein family HMM TIGR02246; hypothetical protein 434793 7888260 GBP346_A0478 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895205.1 434407 D 536230 CDS YP_002895206.1 237810755 7887044 complement(435120..436760) 1 NC_012695.1 identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970; 2-isopropylmalate synthase 436760 7887044 GBP346_A0479 Burkholderia pseudomallei MSHR346 2-isopropylmalate synthase YP_002895206.1 435120 R 536230 CDS YP_002895207.1 237810756 7887738 436708..436917 1 NC_012695.1 hypothetical protein 436917 7887738 GBP346_A0480 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895207.1 436708 D 536230 CDS YP_002895208.1 237810757 7888151 complement(437195..438016) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 438016 7888151 GBP346_A0481 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002895208.1 437195 R 536230 CDS YP_002895209.1 237810758 7890315 complement(438664..439644) 1 NC_012695.1 identified by match to protein family HMM PF02885; glycosyl transferase family protein 439644 7890315 GBP346_A0482 Burkholderia pseudomallei MSHR346 glycosyl transferase family protein YP_002895209.1 438664 R 536230 CDS YP_002895210.1 237810759 7886866 complement(439641..442496) 1 NC_012695.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04324; match to protein family HMM PF04879; nitrate reductase 442496 7886866 GBP346_A0483 Burkholderia pseudomallei MSHR346 nitrate reductase YP_002895210.1 439641 R 536230 CDS YP_002895211.1 237810760 7890659 complement(442493..442951) 1 NC_012695.1 identified by match to protein family HMM PF00355; match to protein family HMM TIGR02378; nitrite reductase 442951 7890659 GBP346_A0484 Burkholderia pseudomallei MSHR346 nitrite reductase YP_002895211.1 442493 R 536230 CDS YP_002895212.1 237810761 7887696 complement(442964..445408) 1 NC_012695.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; nitrite reductase [NAD(P)H], large subunit 445408 nirB_1 7887696 nirB_1 Burkholderia pseudomallei MSHR346 nitrite reductase [NAD(P)H], large subunit YP_002895212.1 442964 R 536230 CDS YP_002895213.1 237810762 7887087 445546..445806 1 NC_012695.1 hypothetical protein 445806 7887087 GBP346_A0486 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895213.1 445546 D 536230 CDS YP_002895214.1 237810763 7889525 445793..446437 1 NC_012695.1 identified by match to protein family HMM PF02798; match to protein family HMM TIGR01262; maleylacetoacetate isomerase 446437 maiA 7889525 maiA Burkholderia pseudomallei MSHR346 maleylacetoacetate isomerase YP_002895214.1 445793 D 536230 CDS YP_002895215.1 237810764 7887477 446475..446597 1 NC_012695.1 hypothetical protein 446597 7887477 GBP346_A0489 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895215.1 446475 D 536230 CDS YP_002895216.1 237810765 7890954 complement(446594..447910) 1 NC_012695.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 447910 ftsY 7890954 ftsY Burkholderia pseudomallei MSHR346 signal recognition particle-docking protein FtsY YP_002895216.1 446594 R 536230 CDS YP_002895217.1 237810766 7888039 448162..448788 1 NC_012695.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RNA methyltransferase, RsmD family 448788 7888039 GBP346_A0490 Burkholderia pseudomallei MSHR346 RNA methyltransferase, RsmD family YP_002895217.1 448162 D 536230 CDS YP_002895218.1 237810767 7888547 448899..449399 1 NC_012695.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 449399 coaD 7888547 coaD Burkholderia pseudomallei MSHR346 phosphopantetheine adenylyltransferase YP_002895218.1 448899 D 536230 CDS YP_002895219.1 237810768 7889974 449351..449728 1 NC_012695.1 identified by match to protein family HMM PF00037; ferredoxin 449728 7889974 GBP346_A0492 Burkholderia pseudomallei MSHR346 ferredoxin YP_002895219.1 449351 D 536230 CDS YP_002895220.1 237810769 7887985 complement(449907..450980) 1 NC_012695.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 450980 hisC_1 7887985 hisC_1 Burkholderia pseudomallei MSHR346 histidinol-phosphate aminotransferase YP_002895220.1 449907 R 536230 CDS YP_002895221.1 237810770 7888887 complement(451066..451671) 1 NC_012695.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 451671 pth 7888887 pth Burkholderia pseudomallei MSHR346 peptidyl-tRNA hydrolase YP_002895221.1 451066 R 536230 CDS YP_002895222.1 237810771 7890419 complement(451785..452399) 1 NC_012695.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 452399 7890419 GBP346_A0495 Burkholderia pseudomallei MSHR346 50S ribosomal protein L25/general stress protein Ctc YP_002895222.1 451785 R 536230 CDS YP_002895223.1 237810772 7890873 complement(452563..453519) 1 NC_012695.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 453519 7890873 GBP346_A0496 Burkholderia pseudomallei MSHR346 ribose-phosphate pyrophosphokinase YP_002895223.1 452563 R 536230 CDS YP_002895224.1 237810773 7889196 complement(453697..454578) 1 NC_012695.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 454578 ipk 7889196 ipk Burkholderia pseudomallei MSHR346 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002895224.1 453697 R 536230 CDS YP_002895225.1 237810774 7889864 complement(454612..455235) 1 NC_012695.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 455235 lolB 7889864 lolB Burkholderia pseudomallei MSHR346 outer membrane lipoprotein LolB YP_002895225.1 454612 R 536230 CDS YP_002895226.1 237810775 7887524 complement(455232..457052) 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07721; TPR domain protein 457052 7887524 GBP346_A0500 Burkholderia pseudomallei MSHR346 TPR domain protein YP_002895226.1 455232 R 536230 CDS YP_002895227.1 237810776 7890320 457141..457971 1 NC_012695.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 457971 mutM 7890320 mutM Burkholderia pseudomallei MSHR346 formamidopyrimidine-DNA glycosylase YP_002895227.1 457141 D 536230 CDS YP_002895228.1 237810777 7888880 457976..459082 1 NC_012695.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 459082 mutY 7888880 mutY Burkholderia pseudomallei MSHR346 A/G-specific adenine glycosylase YP_002895228.1 457976 D 536230 CDS YP_002895229.1 237810778 7890269 complement(459476..460108) 1 NC_012695.1 identified by match to protein family HMM PF02190; ATP-dependent protease La domain protein 460108 7890269 GBP346_A0503 Burkholderia pseudomallei MSHR346 ATP-dependent protease La domain protein YP_002895229.1 459476 R 536230 CDS YP_002895230.1 237810779 7889095 complement(460135..461028) 1 NC_012695.1 identified by match to protein family HMM PF03668; hypothetical protein 461028 7889095 GBP346_A0504 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895230.1 460135 R 536230 CDS YP_002895231.1 237810780 7887241 complement(461114..462082) 1 NC_012695.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 462082 7887241 GBP346_A0505 Burkholderia pseudomallei MSHR346 HPr kinase/phosphorylase YP_002895231.1 461114 R 536230 CDS YP_002895232.1 237810781 7888560 complement(462211..462729) 1 NC_012695.1 identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419; nitrogen regulatory protein (Enzyme IIA-NTR) 462729 7888560 GBP346_A0506 Burkholderia pseudomallei MSHR346 nitrogen regulatory protein (Enzyme IIA-NTR) YP_002895232.1 462211 R 536230 CDS YP_002895233.1 237810782 7887891 complement(462953..463312) 1 NC_012695.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 463312 raiA 7887891 raiA Burkholderia pseudomallei MSHR346 ribosomal subunit interface protein YP_002895233.1 462953 R 536230 CDS YP_002895234.1 237810783 7889560 complement(463462..465003) 1 NC_012695.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 465003 rpoN_1 7889560 rpoN_1 Burkholderia pseudomallei MSHR346 RNA polymerase factor sigma-54 YP_002895234.1 463462 R 536230 CDS YP_002895235.1 237810784 7888437 complement(465139..465915) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 465915 7888437 GBP346_A0509 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895235.1 465139 R 536230 CDS YP_002895236.1 237810785 7887950 complement(465912..466577) 1 NC_012695.1 identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; lipopolysaccharide transport periplasmic protein LptA 466577 lptA 7887950 lptA Burkholderia pseudomallei MSHR346 lipopolysaccharide transport periplasmic protein LptA YP_002895236.1 465912 R 536230 CDS YP_002895237.1 237810786 7888309 complement(466596..467210) 1 NC_012695.1 identified by match to protein family HMM PF06835; hypothetical protein 467210 7888309 GBP346_A0511 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895237.1 466596 R 536230 CDS YP_002895238.1 237810787 7887431 complement(467216..467758) 1 NC_012695.1 identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) 467758 7887431 GBP346_A0512 Burkholderia pseudomallei MSHR346 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) YP_002895238.1 467216 R 536230 CDS YP_002895239.1 237810788 7889421 complement(467755..468738) 1 NC_012695.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose 5-phosphate isomerase 468738 7889421 GBP346_A0513 Burkholderia pseudomallei MSHR346 arabinose 5-phosphate isomerase YP_002895239.1 467755 R 536230 CDS YP_002895240.1 237810789 7887650 468866..470875 1 NC_012695.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; transporter, monovalent cation:proton antiporter-2 470875 7887650 GBP346_A0514 Burkholderia pseudomallei MSHR346 transporter, monovalent cation:proton antiporter-2 YP_002895240.1 468866 D 536230 CDS YP_002895241.1 237810790 7887284 470872..471522 1 NC_012695.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 471522 apt 7887284 apt Burkholderia pseudomallei MSHR346 adenine phosphoribosyltransferase YP_002895241.1 470872 D 536230 CDS YP_002895242.1 237810791 7889923 471616..472230 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 472230 7889923 GBP346_A0516 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002895242.1 471616 D 536230 CDS YP_002895243.1 237810792 7888123 472243..473100 1 NC_012695.1 identified by match to protein family HMM PF00293; hydrolase, NUDIX family 473100 7888123 GBP346_A0517 Burkholderia pseudomallei MSHR346 hydrolase, NUDIX family YP_002895243.1 472243 D 536230 CDS YP_002895244.1 237810793 7887473 473152..474033 1 NC_012695.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 474033 purU 7887473 purU Burkholderia pseudomallei MSHR346 formyltetrahydrofolate deformylase YP_002895244.1 473152 D 536230 CDS YP_002895245.1 237810794 7888765 complement(474330..475415) 1 NC_012695.1 hypothetical protein 475415 7888765 GBP346_A0519 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895245.1 474330 R 536230 CDS YP_002895246.1 237810795 7889485 complement(475616..478483) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC, A subunit 478483 uvrA 7889485 uvrA Burkholderia pseudomallei MSHR346 excinuclease ABC, A subunit YP_002895246.1 475616 R 536230 CDS YP_002895247.1 237810796 7888264 478727..479884 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 479884 7888264 GBP346_A0521 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895247.1 478727 D 536230 CDS YP_002895248.1 237810797 7889833 479998..480552 1 NC_012695.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 480552 7889833 GBP346_A0522 Burkholderia pseudomallei MSHR346 single-stranded DNA-binding protein YP_002895248.1 479998 D 536230 CDS YP_002895249.1 237810798 7888785 complement(480664..481395) 1 NC_012695.1 identified by match to protein family HMM PF01738; dienelactone hydrolase family protein 481395 7888785 GBP346_A0523 Burkholderia pseudomallei MSHR346 dienelactone hydrolase family protein YP_002895249.1 480664 R 536230 CDS YP_002895250.1 237810799 7888216 complement(481449..481616) 1 NC_012695.1 hypothetical protein 481616 7888216 GBP346_A0524 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895250.1 481449 R 536230 CDS YP_002895251.1 237810800 7890897 481738..483318 1 NC_012695.1 hypothetical protein 483318 7890897 GBP346_A0525 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895251.1 481738 D 536230 CDS YP_002895252.1 237810801 7887765 complement(483480..483725) 1 NC_012695.1 hypothetical protein 483725 7887765 GBP346_A0526 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895252.1 483480 R 536230 CDS YP_002895253.1 237810802 7888396 483713..483838 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 483838 7888396 GBP346_A0527 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895253.1 483713 D 536230 CDS YP_002895254.1 237810803 7890233 complement(483904..484221) 1 NC_012695.1 hypothetical protein 484221 7890233 GBP346_A0528 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895254.1 483904 R 536230 CDS YP_002895255.1 237810804 7890730 484383..484550 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 484550 7890730 GBP346_A0529 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895255.1 484383 D 536230 CDS YP_002895256.1 237810805 7889249 complement(484836..484967) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 484967 7889249 GBP346_A0530 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895256.1 484836 R 536230 CDS YP_002895257.1 237810806 7886742 complement(485043..485966) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 485966 7886742 GBP346_A0531 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895257.1 485043 R 536230 CDS YP_002895258.1 237810807 7890900 complement(486110..486460) 1 NC_012695.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase family protein 486460 7890900 GBP346_A0532 Burkholderia pseudomallei MSHR346 4-carboxymuconolactone decarboxylase family protein YP_002895258.1 486110 R 536230 CDS YP_002895259.1 237810808 7889914 complement(486512..486733) 1 NC_012695.1 hypothetical protein 486733 7889914 GBP346_A0533 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895259.1 486512 R 536230 CDS YP_002895260.1 237810809 7888476 complement(486730..492825) 1 NC_012695.1 identified by match to protein family HMM PF01839; match to protein family HMM PF05593; match to protein family HMM TIGR01643; match to protein family HMM TIGR03696; FG-GAP repeat/YD repeat/RHS repeat protein 492825 7888476 GBP346_A0534 Burkholderia pseudomallei MSHR346 FG-GAP repeat/YD repeat/RHS repeat protein YP_002895260.1 486730 R 536230 CDS YP_002895261.1 237810810 7889899 complement(492847..496113) 1 NC_012695.1 hypothetical protein 496113 7889899 GBP346_A0535 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895261.1 492847 R 536230 CDS YP_002895262.1 237810811 7888155 complement(496086..496301) 1 NC_012695.1 hypothetical protein 496301 7888155 GBP346_A0536 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895262.1 496086 R 536230 CDS YP_002895263.1 237810812 7889419 complement(496331..496447) 1 NC_012695.1 hypothetical protein 496447 7889419 GBP346_A0537 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895263.1 496331 R 536230 CDS YP_002895264.1 237810813 7888951 complement(496654..496785) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 496785 7888951 GBP346_A0538 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895264.1 496654 R 536230 CDS YP_002895265.1 237810814 7888674 496885..497043 1 NC_012695.1 hypothetical protein 497043 7888674 GBP346_A0539 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895265.1 496885 D 536230 CDS YP_002895266.1 237810815 7889078 complement(497325..497708) 1 NC_012695.1 hypothetical protein 497708 7889078 GBP346_A0540 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895266.1 497325 R 536230 CDS YP_002895267.1 237810816 7887282 complement(497726..498163) 1 NC_012695.1 hypothetical protein 498163 7887282 GBP346_A0541 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895267.1 497726 R 536230 CDS YP_002895268.1 237810817 7889153 complement(498390..498767) 1 NC_012695.1 hypothetical protein 498767 7889153 GBP346_A0542 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895268.1 498390 R 536230 CDS YP_002895269.1 237810818 7887768 complement(499009..499254) 1 NC_012695.1 hypothetical protein 499254 7887768 GBP346_A0543 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895269.1 499009 R 536230 CDS YP_002895270.1 237810819 7887353 complement(499251..499604) 1 NC_012695.1 hypothetical protein 499604 7887353 GBP346_A0544 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895270.1 499251 R 536230 CDS YP_002895271.1 237810820 7890670 499864..500871 1 NC_012695.1 identified by match to protein family HMM PF00498; FHA domain protein 500871 7890670 GBP346_A0545 Burkholderia pseudomallei MSHR346 FHA domain protein YP_002895271.1 499864 D 536230 CDS YP_002895272.1 237810821 7886881 500882..504961 1 NC_012695.1 identified by match to protein family HMM PF00069; protein kinase domain protein 504961 7886881 GBP346_A0546 Burkholderia pseudomallei MSHR346 protein kinase domain protein YP_002895272.1 500882 D 536230 CDS YP_002895273.1 237810822 7890187 504958..505320 1 NC_012695.1 hypothetical protein 505320 7890187 GBP346_A0547 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895273.1 504958 D 536230 CDS YP_002895274.1 237810823 7887346 505322..505684 1 NC_012695.1 hypothetical protein 505684 7887346 GBP346_A0548 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895274.1 505322 D 536230 CDS YP_002895275.1 237810824 7887786 505776..508076 1 NC_012695.1 identified by match to protein family HMM PF02624; match to protein family HMM TIGR00702; match to protein family HMM TIGR03604; AknN 508076 7887786 GBP346_A0549 Burkholderia pseudomallei MSHR346 AknN YP_002895275.1 505776 D 536230 CDS YP_002895276.1 237810825 7889848 508146..508922 1 NC_012695.1 identified by match to protein family HMM PF00596; aldolase II superfamily protein 508922 7889848 GBP346_A0550 Burkholderia pseudomallei MSHR346 aldolase II superfamily protein YP_002895276.1 508146 D 536230 CDS YP_002895277.1 237810826 7889596 complement(509030..509206) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 509206 7889596 GBP346_A0551 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895277.1 509030 R 536230 CDS YP_002895278.1 237810827 7889229 509221..509340 1 NC_012695.1 hypothetical protein 509340 7889229 GBP346_A0552 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895278.1 509221 D 536230 CDS YP_002895279.1 237810828 7889876 509405..511768 1 NC_012695.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; eal/ggdef domain protein 511768 7889876 GBP346_A0553 Burkholderia pseudomallei MSHR346 eal/ggdef domain protein YP_002895279.1 509405 D 536230 CDS YP_002895280.1 237810829 7890918 complement(511959..513227) 1 NC_012695.1 identified by match to protein family HMM PF01943; transporter, polysaccharide transporter 513227 7890918 GBP346_A0554 Burkholderia pseudomallei MSHR346 transporter, polysaccharide transporter YP_002895280.1 511959 R 536230 CDS YP_002895281.1 237810830 7888570 complement(513304..514500) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 514500 7888570 GBP346_A0555 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002895281.1 513304 R 536230 CDS YP_002895282.1 237810831 7886863 complement(514535..516127) 1 NC_012695.1 identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 516127 7886863 GBP346_A0556 Burkholderia pseudomallei MSHR346 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002895282.1 514535 R 536230 CDS YP_002895283.1 237810832 7886826 complement(516124..516774) 1 NC_012695.1 ElaA family protein 516774 7886826 GBP346_A0557 Burkholderia pseudomallei MSHR346 ElaA family protein YP_002895283.1 516124 R 536230 CDS YP_002895284.1 237810833 7889081 complement(516741..517133) 1 NC_012695.1 hypothetical protein 517133 7889081 GBP346_A0558 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895284.1 516741 R 536230 CDS YP_002895285.1 237810834 7890083 517152..518393 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 518393 7890083 GBP346_A0559 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 YP_002895285.1 517152 D 536230 CDS YP_002895286.1 237810835 7890003 518421..519155 1 NC_012695.1 identified by match to protein family HMM PF01569; PAP2 family protein 519155 7890003 GBP346_A0560 Burkholderia pseudomallei MSHR346 PAP2 family protein YP_002895286.1 518421 D 536230 CDS YP_002895287.1 237810836 7888415 519205..519330 1 NC_012695.1 hypothetical protein 519330 7888415 GBP346_A0561 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895287.1 519205 D 536230 CDS YP_002895288.1 237810837 7890401 519957..521288 1 NC_012695.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator 521288 7890401 GBP346_A0562 Burkholderia pseudomallei MSHR346 sigma-54 dependent transcriptional regulator YP_002895288.1 519957 D 536230 CDS YP_002895289.1 237810838 7886899 complement(521312..523288) 1 NC_012695.1 hypothetical protein 523288 7886899 GBP346_A0563 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895289.1 521312 R 536230 CDS YP_002895290.1 237810839 7889482 complement(523285..525804) 1 NC_012695.1 glycosyl hydrolase, family 2 525804 7889482 GBP346_A0564 Burkholderia pseudomallei MSHR346 glycosyl hydrolase, family 2 YP_002895290.1 523285 R 536230 CDS YP_002895291.1 237810840 7890413 complement(525801..526889) 1 NC_012695.1 identified by match to protein family HMM PF08893; hypothetical protein 526889 7890413 GBP346_A0565 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895291.1 525801 R 536230 CDS YP_002895292.1 237810841 7889027 complement(526886..527860) 1 NC_012695.1 hypothetical protein 527860 7889027 GBP346_A0566 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895292.1 526886 R 536230 CDS YP_002895293.1 237810842 7887974 complement(527857..529080) 1 NC_012695.1 identified by match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 529080 7887974 GBP346_A0567 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002895293.1 527857 R 536230 CDS YP_002895294.1 237810843 7888866 complement(529077..529328) 1 NC_012695.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 529328 7888866 GBP346_A0568 Burkholderia pseudomallei MSHR346 acyl carrier protein YP_002895294.1 529077 R 536230 CDS YP_002895295.1 237810844 7887360 complement(529573..530367) 1 NC_012695.1 identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain protein 530367 7887360 GBP346_A0569 Burkholderia pseudomallei MSHR346 cyclic nucleotide-binding domain protein YP_002895295.1 529573 R 536230 CDS YP_002895296.1 237810845 7890798 complement(530364..530564) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 530564 7890798 GBP346_A0570 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895296.1 530364 R 536230 CDS YP_002895297.1 237810846 7889407 530531..530761 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 530761 7889407 GBP346_A0571 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895297.1 530531 D 536230 CDS YP_002895298.1 237810847 7890130 531292..532101 1 NC_012695.1 hypothetical protein 532101 7890130 GBP346_A0572 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895298.1 531292 D 536230 CDS YP_002895299.1 237810848 7888282 532134..533516 1 NC_012695.1 identified by match to protein family HMM PF02397; match to protein family HMM TIGR03023; match to protein family HMM TIGR03025; undecaprenyl-phosphate glucose phosphotransferase 533516 7888282 GBP346_A0573 Burkholderia pseudomallei MSHR346 undecaprenyl-phosphate glucose phosphotransferase YP_002895299.1 532134 D 536230 CDS YP_002895300.1 237810849 7889709 533588..534877 1 NC_012695.1 identified by match to protein family HMM PF02563; capsular polysaccharide biosynthesis/export protein 534877 7889709 GBP346_A0574 Burkholderia pseudomallei MSHR346 capsular polysaccharide biosynthesis/export protein YP_002895300.1 533588 D 536230 CDS YP_002895301.1 237810850 7886918 535058..536302 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 536302 7886918 GBP346_A0575 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002895301.1 535058 D 536230 CDS YP_002895302.1 237810851 7887128 complement(536331..537353) 1 NC_012695.1 hypothetical protein 537353 7887128 GBP346_A0576 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895302.1 536331 R 536230 CDS YP_002895303.1 237810852 7888385 complement(537375..537662) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 537662 7888385 GBP346_A0577 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895303.1 537375 R 536230 CDS YP_002895304.1 237810853 7888223 537948..538382 1 NC_012695.1 identified by match to protein family HMM PF07452; chrd domain protein 538382 7888223 GBP346_A0578 Burkholderia pseudomallei MSHR346 chrd domain protein YP_002895304.1 537948 D 536230 CDS YP_002895305.1 237810854 7887919 538474..539439 1 NC_012695.1 identified by match to protein family HMM PF07859; lipolytic enzyme 539439 7887919 GBP346_A0580 Burkholderia pseudomallei MSHR346 lipolytic enzyme YP_002895305.1 538474 D 536230 CDS YP_002895306.1 237810855 7890628 complement(539409..540323) 1 NC_012695.1 hypothetical protein 540323 7890628 GBP346_A0579 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895306.1 539409 R 536230 CDS YP_002895307.1 237810856 7887056 540430..542025 1 NC_012695.1 identified by match to protein family HMM PF07690; drug resistance MFS transporter, drug:H+ antiporter-1 family 542025 7887056 GBP346_A0581 Burkholderia pseudomallei MSHR346 drug resistance MFS transporter, drug:H+ antiporter-1 family YP_002895307.1 540430 D 536230 CDS YP_002895308.1 237810857 7890210 542074..542508 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 542508 7890210 GBP346_A0582 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002895308.1 542074 D 536230 CDS YP_002895309.1 237810858 7887976 complement(542626..543207) 1 NC_012695.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; intracellular protease, PfpI family 543207 7887976 GBP346_A0583 Burkholderia pseudomallei MSHR346 intracellular protease, PfpI family YP_002895309.1 542626 R 536230 CDS YP_002895310.1 237810859 7890338 complement(543357..544637) 1 NC_012695.1 D-serine ammonia-lyase 544637 7890338 GBP346_A0584 Burkholderia pseudomallei MSHR346 D-serine ammonia-lyase YP_002895310.1 543357 R 536230 CDS YP_002895311.1 237810860 7888730 544775..545668 1 NC_012695.1 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator, RpiR family 545668 7888730 GBP346_A0585 Burkholderia pseudomallei MSHR346 transcriptional regulator, RpiR family YP_002895311.1 544775 D 536230 CDS YP_002895312.1 237810861 7887420 545670..547151 1 NC_012695.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969; N-acyl-D-aspartate deacylase 547151 7887420 GBP346_A0586 Burkholderia pseudomallei MSHR346 N-acyl-D-aspartate deacylase YP_002895312.1 545670 D 536230 CDS YP_002895313.1 237810862 7888428 547162..547281 1 NC_012695.1 hypothetical protein 547281 7888428 GBP346_A0587 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895313.1 547162 D 536230 CDS YP_002895314.1 237810863 7887578 547278..547664 1 NC_012695.1 identified by match to protein family HMM PF01042; putative endoribonuclease L-PSP 547664 7887578 GBP346_A0588 Burkholderia pseudomallei MSHR346 putative endoribonuclease L-PSP YP_002895314.1 547278 D 536230 CDS YP_002895315.1 237810864 7888287 complement(548025..548849) 1 NC_012695.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 548849 queF 7888287 queF Burkholderia pseudomallei MSHR346 7-cyano-7-deazaguanine reductase YP_002895315.1 548025 R 536230 CDS YP_002895316.1 237810865 7889463 complement(548869..550392) 1 NC_012695.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 550392 ilvA_1 7889463 ilvA_1 Burkholderia pseudomallei MSHR346 threonine dehydratase YP_002895316.1 548869 R 536230 CDS YP_002895317.1 237810866 7888458 complement(550667..550900) 1 NC_012695.1 hypothetical protein 550900 7888458 GBP346_A0591 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895317.1 550667 R 536230 CDS YP_002895318.1 237810867 7887237 550899..554927 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; oxidoreductase, FAD-binding 554927 7887237 GBP346_A0592 Burkholderia pseudomallei MSHR346 oxidoreductase, FAD-binding YP_002895318.1 550899 D 536230 CDS YP_002895319.1 237810868 7889807 554947..555405 1 NC_012695.1 identified by match to protein family HMM PF01230; HIT domain protein 555405 7889807 GBP346_A0593 Burkholderia pseudomallei MSHR346 HIT domain protein YP_002895319.1 554947 D 536230 CDS YP_002895320.1 237810869 7887542 555402..555815 1 NC_012695.1 identified by match to protein family HMM PF06155; hypothetical protein 555815 7887542 GBP346_A0594 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895320.1 555402 D 536230 CDS YP_002895321.1 237810870 7888303 555863..556594 1 NC_012695.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 556594 ubiE 7888303 ubiE Burkholderia pseudomallei MSHR346 ubiquinone/menaquinone biosynthesis methyltransferase YP_002895321.1 555863 D 536230 CDS YP_002895322.1 237810871 7890626 556684..557655 1 NC_012695.1 identified by match to protein family HMM PF04280; Tim44 domain protein 557655 7890626 GBP346_A0596 Burkholderia pseudomallei MSHR346 Tim44 domain protein YP_002895322.1 556684 D 536230 CDS YP_002895323.1 237810872 7888501 557736..558410 1 NC_012695.1 sterol-binding domain protein 558410 7888501 GBP346_A0597 Burkholderia pseudomallei MSHR346 sterol-binding domain protein YP_002895323.1 557736 D 536230 CDS YP_002895324.1 237810873 7890765 558423..560000 1 NC_012695.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 560000 ubiB 7890765 ubiB Burkholderia pseudomallei MSHR346 putative ubiquinone biosynthesis protein UbiB YP_002895324.1 558423 D 536230 CDS YP_002895325.1 237810874 7887868 559997..560164 1 NC_012695.1 hypothetical protein 560164 7887868 GBP346_A0599 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895325.1 559997 D 536230 CDS YP_002895326.1 237810875 7888500 560190..560969 1 NC_012695.1 identified by match to protein family HMM PF05724; match to protein family HMM PF08242; thiopurine S-methyltransferase family protein 560969 7888500 GBP346_A0600 Burkholderia pseudomallei MSHR346 thiopurine S-methyltransferase family protein YP_002895326.1 560190 D 536230 CDS YP_002895327.1 237810876 7888420 561070..561411 1 NC_012695.1 identified by match to protein family HMM PF09723; match to protein family HMM TIGR02605; regulatory protein, FmdB family 561411 7888420 GBP346_A0601 Burkholderia pseudomallei MSHR346 regulatory protein, FmdB family YP_002895327.1 561070 D 536230 CDS YP_002895328.1 237810877 7887943 561482..562129 1 NC_012695.1 identified by match to protein family HMM PF04367; hypothetical protein 562129 7887943 GBP346_A0602 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895328.1 561482 D 536230 CDS YP_002895329.1 237810878 7888826 562186..563988 1 NC_012695.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 563988 aspS 7888826 aspS Burkholderia pseudomallei MSHR346 aspartyl-tRNA synthetase YP_002895329.1 562186 D 536230 CDS YP_002895330.1 237810879 7889900 564198..564674 1 NC_012695.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 564674 ntpA 7889900 ntpA Burkholderia pseudomallei MSHR346 dATP pyrophosphohydrolase YP_002895330.1 564198 D 536230 CDS YP_002895331.1 237810880 7889816 564671..565945 1 NC_012695.1 identified by match to protein family HMM PF00614; cardiolipin synthetase YbhO 565945 7889816 GBP346_A0605 Burkholderia pseudomallei MSHR346 cardiolipin synthetase YbhO YP_002895331.1 564671 D 536230 CDS YP_002895332.1 237810881 7890039 566135..566734 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 566734 7890039 GBP346_A0606 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002895332.1 566135 D 536230 CDS YP_002895333.1 237810882 7890518 566792..568579 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 568579 7890518 GBP346_A0607 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002895333.1 566792 D 536230 CDS YP_002895334.1 237810883 7889543 568737..571172 1 NC_012695.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 571172 7889543 GBP346_A0608 Burkholderia pseudomallei MSHR346 3-hydroxyacyl-CoA dehydrogenase YP_002895334.1 568737 D 536230 CDS YP_002895335.1 237810884 7887011 571352..572551 1 NC_012695.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 572551 7887011 GBP346_A0609 Burkholderia pseudomallei MSHR346 acetyl-CoA acetyltransferase YP_002895335.1 571352 D 536230 CDS YP_002895336.1 237810885 7888602 572568..573410 1 NC_012695.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 573410 7888602 GBP346_A0610 Burkholderia pseudomallei MSHR346 enoyl-CoA hydratase YP_002895336.1 572568 D 536230 CDS YP_002895337.1 237810886 7887500 complement(573524..574348) 1 NC_012695.1 identified by match to protein family HMM PF02634; match to protein family HMM TIGR00129; formate dehydrogenase family accessory protein FdhD 574348 7887500 GBP346_A0611 Burkholderia pseudomallei MSHR346 formate dehydrogenase family accessory protein FdhD YP_002895337.1 573524 R 536230 CDS YP_002895338.1 237810887 7886968 574504..574962 1 NC_012695.1 identified by match to protein family HMM PF09655; match to protein family HMM TIGR02664; hypothetical protein 574962 7886968 GBP346_A0612 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895338.1 574504 D 536230 CDS YP_002895339.1 237810888 7888183 complement(575022..575420) 1 NC_012695.1 identified by match to protein family HMM PF03061; thioesterase family protein 575420 7888183 GBP346_A0613 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002895339.1 575022 R 536230 CDS YP_002895340.1 237810889 7890215 complement(575466..575702) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; thioesterase domain protein 575702 7890215 GBP346_A0614 Burkholderia pseudomallei MSHR346 thioesterase domain protein YP_002895340.1 575466 R 536230 CDS YP_002895341.1 237810890 7890632 575742..577613 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; efflux ABC transporter, heavy metal transporter (HMT) family, permease/ATP-binding protein 577613 7890632 GBP346_A0615 Burkholderia pseudomallei MSHR346 efflux ABC transporter, heavy metal transporter (HMT) family, permease/ATP-binding protein YP_002895341.1 575742 D 536230 CDS YP_002895342.1 237810891 7887612 577625..577813 1 NC_012695.1 hypothetical protein 577813 7887612 GBP346_A0616 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895342.1 577625 D 536230 CDS YP_002895343.1 237810892 7890834 complement(578106..578825) 1 NC_012695.1 identified by match to protein family HMM PF00483; nucleotidyltransferase family protein 578825 7890834 GBP346_A0617 Burkholderia pseudomallei MSHR346 nucleotidyltransferase family protein YP_002895343.1 578106 R 536230 CDS YP_002895344.1 237810893 7887302 complement(578829..579863) 1 NC_012695.1 identified by match to protein family HMM PF01636; phosphotransferase family protein 579863 7887302 GBP346_A0618 Burkholderia pseudomallei MSHR346 phosphotransferase family protein YP_002895344.1 578829 R 536230 CDS YP_002895345.1 237810894 7888895 580076..582439 1 NC_012695.1 identified by match to protein family HMM PF04453; organic solvent tolerance protein 582439 7888895 GBP346_A0619 Burkholderia pseudomallei MSHR346 organic solvent tolerance protein YP_002895345.1 580076 D 536230 CDS YP_002895346.1 237810895 7890096 582500..583852 1 NC_012695.1 identified by match to protein family HMM PF00639; match to protein family HMM PF09312; chaperone SurA 583852 7890096 GBP346_A0620 Burkholderia pseudomallei MSHR346 chaperone SurA YP_002895346.1 582500 D 536230 CDS YP_002895347.1 237810896 7886965 583874..584923 1 NC_012695.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 584923 pdxA 7886965 pdxA Burkholderia pseudomallei MSHR346 4-hydroxythreonine-4-phosphate dehydrogenase YP_002895347.1 583874 D 536230 CDS YP_002895348.1 237810897 7887636 584955..585782 1 NC_012695.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 585782 ksgA 7887636 ksgA Burkholderia pseudomallei MSHR346 dimethyladenosine transferase YP_002895348.1 584955 D 536230 CDS YP_002895349.1 237810898 7889025 complement(586049..586987) 1 NC_012695.1 identified by match to protein family HMM PF00892; hypothetical protein 586987 7889025 GBP346_A0623 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895349.1 586049 R 536230 CDS YP_002895350.1 237810899 7887689 587038..587754 1 NC_012695.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068; lactoylglutathione lyase (Methylglyoxalase)(Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) 587754 7887689 GBP346_A0625 Burkholderia pseudomallei MSHR346 lactoylglutathione lyase (Methylglyoxalase)(Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) YP_002895350.1 587038 D 536230 CDS YP_002895351.1 237810900 7890063 complement(587748..587882) 1 NC_012695.1 hypothetical protein 587882 7890063 GBP346_A0624 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895351.1 587748 R 536230 CDS YP_002895352.1 237810901 7888715 complement(587967..588845) 1 NC_012695.1 identified by match to protein family HMM PF01863; hypothetical protein 588845 7888715 GBP346_A0626 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895352.1 587967 R 536230 CDS YP_002895353.1 237810902 7887088 complement(588893..589672) 1 NC_012695.1 identified by match to protein family HMM PF01553; phospholipid/glycerol acyltransferase 589672 7887088 GBP346_A0627 Burkholderia pseudomallei MSHR346 phospholipid/glycerol acyltransferase YP_002895353.1 588893 R 536230 CDS YP_002895354.1 237810903 7888512 complement(589715..590278) 1 NC_012695.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 590278 7888512 GBP346_A0628 Burkholderia pseudomallei MSHR346 D,D-heptose 1,7-bisphosphate phosphatase YP_002895354.1 589715 R 536230 CDS YP_002895355.1 237810904 7887637 complement(590296..592395) 1 NC_012695.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 592395 glyS 7887637 glyS Burkholderia pseudomallei MSHR346 glycyl-tRNA synthetase subunit beta YP_002895355.1 590296 R 536230 CDS YP_002895356.1 237810905 7887509 complement(592412..593419) 1 NC_012695.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 593419 glyQ 7887509 glyQ Burkholderia pseudomallei MSHR346 glycyl-tRNA synthetase subunit alpha YP_002895356.1 592412 R 536230 CDS YP_002895357.1 237810906 7890146 complement(593675..595381) 1 NC_012695.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 595381 lnt 7890146 lnt Burkholderia pseudomallei MSHR346 apolipoprotein N-acyltransferase YP_002895357.1 593675 R 536230 CDS YP_002895358.1 237810907 7889870 complement(595424..596311) 1 NC_012695.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03471; magnesium and cobalt efflux protein CorC 596311 7889870 GBP346_A0632 Burkholderia pseudomallei MSHR346 magnesium and cobalt efflux protein CorC YP_002895358.1 595424 R 536230 CDS YP_002895359.1 237810908 7888416 complement(596814..597446) 1 NC_012695.1 identified by match to protein family HMM PF04752; match to protein family HMM PF06094; ChaC family protein 597446 7888416 GBP346_A0633 Burkholderia pseudomallei MSHR346 ChaC family protein YP_002895359.1 596814 R 536230 CDS YP_002895360.1 237810909 7890090 complement(597467..598291) 1 NC_012695.1 contains unknown N-terminal domain/putative metalloprotease C-terminal domain; unkown domain/putative metalloprotease fusion protein 598291 7890090 GBP346_A0634 Burkholderia pseudomallei MSHR346 unkown domain/putative metalloprotease fusion protein YP_002895360.1 597467 R 536230 CDS YP_002895361.1 237810910 7890404 598304..598621 1 NC_012695.1 hypothetical protein 598621 7890404 GBP346_A0635 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895361.1 598304 D 536230 CDS YP_002895362.1 237810911 7887395 598740..598895 1 NC_012695.1 hypothetical protein 598895 7887395 GBP346_A0636 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895362.1 598740 D 536230 CDS YP_002895363.1 237810912 7888034 complement(599020..600084) 1 NC_012695.1 identified by match to protein family HMM PF02562; PhoH family protein 600084 7888034 GBP346_A0637 Burkholderia pseudomallei MSHR346 PhoH family protein YP_002895363.1 599020 R 536230 CDS YP_002895364.1 237810913 7890947 complement(600108..601481) 1 NC_012695.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 601481 miaB 7890947 miaB Burkholderia pseudomallei MSHR346 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002895364.1 600108 R 536230 CDS YP_002895365.1 237810914 7889561 complement(601533..601646) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 601646 7889561 GBP346_A0639 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895365.1 601533 R 536230 CDS YP_002895366.1 237810915 7888004 complement(601739..601945) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 601945 7888004 GBP346_A0640 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895366.1 601739 R 536230 CDS YP_002895367.1 237810916 7890780 complement(601942..602874) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 602874 7890780 GBP346_A0641 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895367.1 601942 R 536230 CDS YP_002895368.1 237810917 7886990 603020..604192 1 NC_012695.1 identified by match to protein family HMM PF07690; inner membrane transport protein YdhP 604192 7886990 GBP346_A0642 Burkholderia pseudomallei MSHR346 inner membrane transport protein YdhP YP_002895368.1 603020 D 536230 CDS YP_002895369.1 237810918 7887710 604326..604994 1 NC_012695.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 604994 7887710 GBP346_A0643 Burkholderia pseudomallei MSHR346 DNA-binding protein YP_002895369.1 604326 D 536230 CDS YP_002895370.1 237810919 7890660 605418..606140 1 NC_012695.1 identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 606140 ribB 7890660 ribB Burkholderia pseudomallei MSHR346 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002895370.1 605418 D 536230 CDS YP_002895371.1 237810920 7887340 complement(606208..606894) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase, IA family protein 606894 7887340 GBP346_A0646 Burkholderia pseudomallei MSHR346 haloacid dehalogenase, IA family protein YP_002895371.1 606208 R 536230 CDS YP_002895372.1 237810921 7889291 complement(607024..607890) 1 NC_012695.1 identified by match to protein family HMM PF00892; integral membrane protein DUF6 607890 7889291 GBP346_A0647 Burkholderia pseudomallei MSHR346 integral membrane protein DUF6 YP_002895372.1 607024 R 536230 CDS YP_002895373.1 237810922 7888835 complement(607967..609187) 1 NC_012695.1 identified by match to protein family HMM PF02655; ATP-grasp domain protein 609187 7888835 GBP346_A0648 Burkholderia pseudomallei MSHR346 ATP-grasp domain protein YP_002895373.1 607967 R 536230 CDS YP_002895374.1 237810923 7890556 complement(609231..610763) 1 NC_012695.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase (glutamine-hydrolyzing) 610763 asnB_1 7890556 asnB_1 Burkholderia pseudomallei MSHR346 asparagine synthase (glutamine-hydrolyzing) YP_002895374.1 609231 R 536230 CDS YP_002895375.1 237810924 7887623 complement(610807..612162) 1 NC_012695.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 612162 7887623 GBP346_A0650 Burkholderia pseudomallei MSHR346 3-phosphoshikimate 1-carboxyvinyltransferase YP_002895375.1 610807 R 536230 CDS YP_002895376.1 237810925 7887023 complement(612201..613508) 1 NC_012695.1 identified by match to protein family HMM PF00275; 3-phosphoshikimate 1-carboxyvinyltransferase 613508 7887023 GBP346_A0651 Burkholderia pseudomallei MSHR346 3-phosphoshikimate 1-carboxyvinyltransferase YP_002895376.1 612201 R 536230 CDS YP_002895377.1 237810926 7888052 complement(613530..614144) 1 NC_012695.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP 614144 7888052 GBP346_A0652 Burkholderia pseudomallei MSHR346 endoribonuclease L-PSP YP_002895377.1 613530 R 536230 CDS YP_002895378.1 237810927 7887563 614143..614634 1 NC_012695.1 hypothetical protein 614634 7887563 GBP346_A0653 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895378.1 614143 D 536230 CDS YP_002895379.1 237810928 7887201 complement(614868..615584) 1 NC_012695.1 identified by match to protein family HMM PF00230; glycerol uptake facilitator protein 615584 7887201 GBP346_A0654 Burkholderia pseudomallei MSHR346 glycerol uptake facilitator protein YP_002895379.1 614868 R 536230 CDS YP_002895380.1 237810929 7890209 complement(615697..617253) 1 NC_012695.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 617253 glpK 7890209 glpK Burkholderia pseudomallei MSHR346 glycerol kinase YP_002895380.1 615697 R 536230 CDS YP_002895381.1 237810930 7886751 complement(617305..618837) 1 NC_012695.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 618837 glpD 7886751 glpD Burkholderia pseudomallei MSHR346 glycerol-3-phosphate dehydrogenase YP_002895381.1 617305 R 536230 CDS YP_002895382.1 237810931 7890676 619005..619376 1 NC_012695.1 putative lipoprotein 619376 7890676 GBP346_A0657 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895382.1 619005 D 536230 CDS YP_002895383.1 237810932 7890889 complement(619443..619640) 1 NC_012695.1 hypothetical protein 619640 7890889 GBP346_A0658 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895383.1 619443 R 536230 CDS YP_002895384.1 237810933 7889609 619761..619976 1 NC_012695.1 hypothetical protein 619976 7889609 GBP346_A0660 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895384.1 619761 D 536230 CDS YP_002895385.1 237810934 7889356 complement(619961..620893) 1 NC_012695.1 identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; glycerol-3-phosphate regulon repressor 620893 glpR 7889356 glpR Burkholderia pseudomallei MSHR346 glycerol-3-phosphate regulon repressor YP_002895385.1 619961 R 536230 CDS YP_002895386.1 237810935 7887666 620968..622641 1 NC_012695.1 identified by match to protein family HMM PF01019; putative gamma-glutamyltransferase 622641 7887666 GBP346_A0661 Burkholderia pseudomallei MSHR346 putative gamma-glutamyltransferase YP_002895386.1 620968 D 536230 CDS YP_002895387.1 237810936 7888108 complement(622830..622946) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 622946 7888108 GBP346_A0662 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895387.1 622830 R 536230 CDS YP_002895388.1 237810937 7886769 622945..623778 1 NC_012695.1 hypothetical protein 623778 7886769 GBP346_A0663 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895388.1 622945 D 536230 CDS YP_002895389.1 237810938 7888208 623848..624348 1 NC_012695.1 hypothetical protein 624348 7888208 GBP346_A0664 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895389.1 623848 D 536230 CDS YP_002895390.1 237810939 7890606 complement(624486..625952) 1 NC_012695.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE 625952 rhlE 7890606 rhlE Burkholderia pseudomallei MSHR346 ATP-dependent RNA helicase RhlE YP_002895390.1 624486 R 536230 CDS YP_002895391.1 237810940 7890222 complement(626080..627378) 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 627378 7890222 GBP346_A0666 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002895391.1 626080 R 536230 CDS YP_002895392.1 237810941 7890866 complement(627398..628147) 1 NC_012695.1 cytochrome c, class I 628147 7890866 GBP346_A0667 Burkholderia pseudomallei MSHR346 cytochrome c, class I YP_002895392.1 627398 R 536230 CDS YP_002895393.1 237810942 7889492 628336..628587 1 NC_012695.1 hypothetical protein 628587 7889492 GBP346_A0668 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895393.1 628336 D 536230 CDS YP_002895394.1 237810943 7889707 628584..629510 1 NC_012695.1 identified by match to protein family HMM PF05425; copper resistance D 629510 7889707 GBP346_A0669 Burkholderia pseudomallei MSHR346 copper resistance D YP_002895394.1 628584 D 536230 CDS YP_002895395.1 237810944 7889790 complement(630029..631177) 1 NC_012695.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; galactonate dehydratase 631177 7889790 GBP346_A0670 Burkholderia pseudomallei MSHR346 galactonate dehydratase YP_002895395.1 630029 R 536230 CDS YP_002895396.1 237810945 7887138 631625..631972 1 NC_012695.1 identified by match to protein family HMM PF04828; glutathione-dependent formaldehyde-activating, GFA 631972 7887138 GBP346_A0671 Burkholderia pseudomallei MSHR346 glutathione-dependent formaldehyde-activating, GFA YP_002895396.1 631625 D 536230 CDS YP_002895397.1 237810946 7889905 complement(632104..632550) 1 NC_012695.1 hypothetical protein 632550 7889905 GBP346_A0672 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895397.1 632104 R 536230 CDS YP_002895398.1 237810947 7889366 632846..634516 1 NC_012695.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; Ser/Thr protein phosphatase family protein 634516 7889366 GBP346_A0674 Burkholderia pseudomallei MSHR346 Ser/Thr protein phosphatase family protein YP_002895398.1 632846 D 536230 CDS YP_002895399.1 237810948 7890747 complement(634494..636377) 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF03707; sensor histidine kinase 636377 7890747 GBP346_A0673 Burkholderia pseudomallei MSHR346 sensor histidine kinase YP_002895399.1 634494 R 536230 CDS YP_002895400.1 237810949 7888016 complement(636427..637872) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01966; response regulator 637872 7888016 GBP346_A0675 Burkholderia pseudomallei MSHR346 response regulator YP_002895400.1 636427 R 536230 CDS YP_002895401.1 237810950 7887493 complement(637895..638080) 1 NC_012695.1 hypothetical protein 638080 7887493 GBP346_A0676 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895401.1 637895 R 536230 CDS YP_002895402.1 237810951 7890487 638105..638386 1 NC_012695.1 hypothetical protein 638386 7890487 GBP346_A0677 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895402.1 638105 D 536230 CDS YP_002895403.1 237810952 7887963 638535..639116 1 NC_012695.1 hypothetical protein 639116 7887963 GBP346_A0678 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895403.1 638535 D 536230 CDS YP_002895404.1 237810953 7890433 complement(639284..641035) 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229; aerotaxis receptor 641035 7890433 GBP346_A0679 Burkholderia pseudomallei MSHR346 aerotaxis receptor YP_002895404.1 639284 R 536230 CDS YP_002895405.1 237810954 7889695 complement(641116..641691) 1 NC_012695.1 hypothetical protein 641691 7889695 GBP346_A0680 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895405.1 641116 R 536230 CDS YP_002895406.1 237810955 7888207 641643..641807 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 641807 7888207 GBP346_A0681 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895406.1 641643 D 536230 CDS YP_002895407.1 237810956 7890746 complement(641935..643695) 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF04030; match to protein family HMM PF09129; putative oxidoreductase, FAD-binding 643695 7890746 GBP346_A0682 Burkholderia pseudomallei MSHR346 putative oxidoreductase, FAD-binding YP_002895407.1 641935 R 536230 CDS YP_002895408.1 237810957 7888499 643734..643970 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 643970 7888499 GBP346_A0683 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895408.1 643734 D 536230 CDS YP_002895409.1 237810958 7887711 643967..645322 1 NC_012695.1 identified by match to protein family HMM PF03466; transcriptional regulator, LysR family 645322 7887711 GBP346_A0684 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895409.1 643967 D 536230 CDS YP_002895410.1 237810959 7890153 645372..646451 1 NC_012695.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 646451 ybbB 7890153 ybbB Burkholderia pseudomallei MSHR346 tRNA 2-selenouridine synthase YP_002895410.1 645372 D 536230 CDS YP_002895411.1 237810960 7889495 complement(646476..646661) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 646661 7889495 GBP346_A0686 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895411.1 646476 R 536230 CDS YP_002895412.1 237810961 7889034 complement(646825..647013) 1 NC_012695.1 hypothetical protein 647013 7889034 GBP346_A0687 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895412.1 646825 R 536230 CDS YP_002895413.1 237810962 7888043 647015..647149 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 647149 7888043 GBP346_A0688 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895413.1 647015 D 536230 CDS YP_002895414.1 237810963 7889148 647146..647316 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 647316 7889148 GBP346_A0689 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895414.1 647146 D 536230 CDS YP_002895415.1 237810964 7886914 complement(647371..648687) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 648687 7886914 GBP346_A0690 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895415.1 647371 R 536230 CDS YP_002895416.1 237810965 7888202 complement(648753..650618) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 650618 7888202 GBP346_A0691 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002895416.1 648753 R 536230 CDS YP_002895417.1 237810966 7890047 650773..652248 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; protein-L-isoaspartate O-methyltransferase 652248 7890047 GBP346_A0692 Burkholderia pseudomallei MSHR346 protein-L-isoaspartate O-methyltransferase YP_002895417.1 650773 D 536230 CDS YP_002895418.1 237810967 7890103 652203..652880 1 NC_012695.1 hypothetical protein 652880 7890103 GBP346_A0693 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895418.1 652203 D 536230 CDS YP_002895419.1 237810968 7888219 652877..654232 1 NC_012695.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 654232 pncB_1 7888219 pncB_1 Burkholderia pseudomallei MSHR346 nicotinate phosphoribosyltransferase YP_002895419.1 652877 D 536230 CDS YP_002895420.1 237810969 7888398 654383..655090 1 NC_012695.1 identified by match to protein family HMM PF00156; phosphoribosyl transferase domain protein 655090 7888398 GBP346_A0695 Burkholderia pseudomallei MSHR346 phosphoribosyl transferase domain protein YP_002895420.1 654383 D 536230 CDS YP_002895421.1 237810970 7889490 complement(655138..658257) 1 NC_012695.1 identified by match to protein family HMM PF00912; glycosyl transferase family 51 658257 7889490 GBP346_A0696 Burkholderia pseudomallei MSHR346 glycosyl transferase family 51 YP_002895421.1 655138 R 536230 CDS YP_002895422.1 237810971 7888806 complement(658254..658679) 1 NC_012695.1 hypothetical protein 658679 7888806 GBP346_A0697 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895422.1 658254 R 536230 CDS YP_002895423.1 237810972 7887464 complement(658745..660184) 1 NC_012695.1 identified by match to protein family HMM PF00034; gluconate 2-dehydrogenase cytochrome c subunit 660184 7887464 GBP346_A0698 Burkholderia pseudomallei MSHR346 gluconate 2-dehydrogenase cytochrome c subunit YP_002895423.1 658745 R 536230 CDS YP_002895424.1 237810973 7888056 complement(660175..660807) 1 NC_012695.1 hypothetical protein 660807 7888056 GBP346_A0699 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895424.1 660175 R 536230 CDS YP_002895425.1 237810974 7888574 complement(660804..663494) 1 NC_012695.1 identified by match to protein family HMM PF00115; match to protein family HMM PF00510; match to protein family HMM TIGR02891; quinol oxidase subunit 1 (Quinol oxidase polypeptide I)(Quinol oxidase aa3-600, subunit QoxB) (Oxidase aa(3)-600 subunit 1) 663494 7888574 GBP346_A0700 Burkholderia pseudomallei MSHR346 quinol oxidase subunit 1 (Quinol oxidase polypeptide I)(Quinol oxidase aa3-600, subunit QoxB) (Oxidase aa(3)-600 subunit 1) YP_002895425.1 660804 R 536230 CDS YP_002895426.1 237810975 7888276 complement(663511..664629) 1 NC_012695.1 identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM TIGR02866; cytochrome oxidase subunit II 664629 7888276 GBP346_A0701 Burkholderia pseudomallei MSHR346 cytochrome oxidase subunit II YP_002895426.1 663511 R 536230 CDS YP_002895427.1 237810976 7889502 complement(664682..666508) 1 NC_012695.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine pyrophosphate protein 666508 7889502 GBP346_A0702 Burkholderia pseudomallei MSHR346 thiamine pyrophosphate protein YP_002895427.1 664682 R 536230 CDS YP_002895428.1 237810977 7890008 666918..667994 1 NC_012695.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; mandelate racemase/muconate lactonizing enzyme 667994 7890008 GBP346_A0703 Burkholderia pseudomallei MSHR346 mandelate racemase/muconate lactonizing enzyme YP_002895428.1 666918 D 536230 CDS YP_002895429.1 237810978 7890246 667984..669003 1 NC_012695.1 hypothetical protein 669003 7890246 GBP346_A0704 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895429.1 667984 D 536230 CDS YP_002895430.1 237810979 7888713 669000..669836 1 NC_012695.1 hypothetical protein 669836 7888713 GBP346_A0705 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895430.1 669000 D 536230 CDS YP_002895431.1 237810980 7889795 669826..671517 1 NC_012695.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; GMC oxidoreductase 671517 7889795 GBP346_A0706 Burkholderia pseudomallei MSHR346 GMC oxidoreductase YP_002895431.1 669826 D 536230 CDS YP_002895432.1 237810981 7886861 complement(671564..673381) 1 NC_012695.1 identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family 673381 vasA_1 7886861 vasA_1 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002895432.1 671564 R 536230 CDS YP_002895433.1 237810982 7889635 complement(673434..673697) 1 NC_012695.1 hypothetical protein 673697 7889635 GBP346_A0708 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895433.1 673434 R 536230 CDS YP_002895434.1 237810983 7888863 complement(673936..674352) 1 NC_012695.1 regulatory protein, LuxR:Response regulator receiver 674352 7888863 GBP346_A0709 Burkholderia pseudomallei MSHR346 regulatory protein, LuxR:Response regulator receiver YP_002895434.1 673936 R 536230 CDS YP_002895435.1 237810984 7890102 674320..676710 1 NC_012695.1 identified by match to protein family HMM PF01804; family S45 unassigned peptidase 676710 7890102 GBP346_A0710 Burkholderia pseudomallei MSHR346 family S45 unassigned peptidase YP_002895435.1 674320 D 536230 CDS YP_002895436.1 237810985 7889494 676740..678005 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 678005 7889494 GBP346_A0711 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895436.1 676740 D 536230 CDS YP_002895437.1 237810986 7888184 complement(678192..680027) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; signal transduction histidine kinase 680027 7888184 GBP346_A0712 Burkholderia pseudomallei MSHR346 signal transduction histidine kinase YP_002895437.1 678192 R 536230 CDS YP_002895438.1 237810987 7886971 complement(679997..680497) 1 NC_012695.1 identified by match to protein family HMM PF00174; oxidoreductase molybdopterin binding 680497 7886971 GBP346_A0713 Burkholderia pseudomallei MSHR346 oxidoreductase molybdopterin binding YP_002895438.1 679997 R 536230 CDS YP_002895439.1 237810988 7890821 complement(680524..681720) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF08667; response regulator 681720 7890821 GBP346_A0714 Burkholderia pseudomallei MSHR346 response regulator YP_002895439.1 680524 R 536230 CDS YP_002895440.1 237810989 7890524 complement(681728..681847) 1 NC_012695.1 hypothetical protein 681847 7890524 GBP346_A0715 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895440.1 681728 R 536230 CDS YP_002895441.1 237810990 7890767 682125..682244 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Sel1 domain protein repeat-containing protein 682244 7890767 GBP346_A0716 Burkholderia pseudomallei MSHR346 Sel1 domain protein repeat-containing protein YP_002895441.1 682125 D 536230 CDS YP_002895442.1 237810991 7888603 complement(682506..682652) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 682652 7888603 GBP346_A0717 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895442.1 682506 R 536230 CDS YP_002895443.1 237810992 7887435 complement(683136..683291) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 683291 7887435 GBP346_A0718 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895443.1 683136 R 536230 CDS YP_002895444.1 237810993 7888152 683877..685358 1 NC_012695.1 identified by match to protein family HMM PF01609; ISBma2, transposase 685358 7888152 GBP346_A0719 Burkholderia pseudomallei MSHR346 ISBma2, transposase YP_002895444.1 683877 D 536230 CDS YP_002895445.1 237810994 7890558 complement(685462..686526) 1 NC_012695.1 SppA protein 686526 7890558 GBP346_A0720 Burkholderia pseudomallei MSHR346 SppA protein YP_002895445.1 685462 R 536230 CDS YP_002895446.1 237810995 7888986 complement(686502..686645) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 686645 7888986 GBP346_A0721 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895446.1 686502 R 536230 CDS YP_002895447.1 237810996 7888669 687642..687770 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 687770 7888669 GBP346_A0722 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895447.1 687642 D 536230 CDS YP_002895448.1 237810997 7889063 687862..688677 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 688677 7889063 GBP346_A0723 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895448.1 687862 D 536230 CDS YP_002895449.1 237810998 7890625 complement(688805..689437) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; hydrolase of HAD-superfamily 689437 7890625 GBP346_A0724 Burkholderia pseudomallei MSHR346 hydrolase of HAD-superfamily YP_002895449.1 688805 R 536230 CDS YP_002895450.1 237810999 7890513 complement(689510..689998) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 689998 7890513 GBP346_A0725 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895450.1 689510 R 536230 CDS YP_002895451.1 237811000 7889126 complement(690411..690533) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 690533 7889126 GBP346_A0726 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895451.1 690411 R 536230 CDS YP_002895452.1 237811001 7890711 complement(691052..691654) 1 NC_012695.1 hypothetical protein 691654 7890711 GBP346_A0727 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895452.1 691052 R 536230 CDS YP_002895453.1 237811002 7888679 complement(691949..692131) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 692131 7888679 GBP346_A0728 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895453.1 691949 R 536230 CDS YP_002895454.1 237811003 7889040 692807..692977 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 692977 7889040 GBP346_A0730 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895454.1 692807 D 536230 CDS YP_002895455.1 237811004 7888966 complement(692948..693997) 1 NC_012695.1 identified by match to protein family HMM PF00589; phage integrase family protein 693997 7888966 GBP346_A0729 Burkholderia pseudomallei MSHR346 phage integrase family protein YP_002895455.1 692948 R 536230 CDS YP_002895456.1 237811005 7889217 complement(694256..694393) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 694393 7889217 GBP346_A0732 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895456.1 694256 R 536230 CDS YP_002895457.1 237811006 7889338 complement(694460..696118) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 696118 7889338 GBP346_A0733 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895457.1 694460 R 536230 CDS YP_002895458.1 237811007 7890281 complement(696341..697897) 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08521; two-component sensor kinase transcriptional regulatory protein 697897 7890281 GBP346_A0734 Burkholderia pseudomallei MSHR346 two-component sensor kinase transcriptional regulatory protein YP_002895458.1 696341 R 536230 CDS YP_002895459.1 237811008 7887545 complement(697921..698742) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 698742 7887545 GBP346_A0735 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002895459.1 697921 R 536230 CDS YP_002895460.1 237811009 7890422 698868..699938 1 NC_012695.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 699938 recA 7890422 recA Burkholderia pseudomallei MSHR346 recombinase A YP_002895460.1 698868 D 536230 CDS YP_002895461.1 237811010 7889517 699938..700921 1 NC_012695.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 700921 recX 7889517 recX Burkholderia pseudomallei MSHR346 recombination regulator RecX YP_002895461.1 699938 D 536230 CDS YP_002895462.1 237811011 7887748 701066..701824 1 NC_012695.1 hypothetical protein 701824 7887748 GBP346_A0738 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895462.1 701066 D 536230 CDS YP_002895463.1 237811012 7887342 701904..703070 1 NC_012695.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 703070 sucC 7887342 sucC Burkholderia pseudomallei MSHR346 succinyl-CoA synthetase subunit beta YP_002895463.1 701904 D 536230 CDS YP_002895464.1 237811013 7886948 703167..704096 1 NC_012695.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 704096 sucD 7886948 sucD Burkholderia pseudomallei MSHR346 succinyl-CoA synthetase subunit alpha YP_002895464.1 703167 D 536230 CDS YP_002895465.1 237811014 7888551 704247..704960 1 NC_012695.1 identified by match to protein family HMM PF03741; integral membrane protein, TerC family 704960 7888551 GBP346_A0741 Burkholderia pseudomallei MSHR346 integral membrane protein, TerC family YP_002895465.1 704247 D 536230 CDS YP_002895466.1 237811015 7887507 705074..705697 1 NC_012695.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; putative type IV pilin protein PilA 705697 7887507 GBP346_A0742 Burkholderia pseudomallei MSHR346 putative type IV pilin protein PilA YP_002895466.1 705074 D 536230 CDS YP_002895467.1 237811016 7888642 705935..707722 1 NC_012695.1 identified by match to protein family HMM PF04932; O-antigen polymerase family protein 707722 7888642 GBP346_A0743 Burkholderia pseudomallei MSHR346 O-antigen polymerase family protein YP_002895467.1 705935 D 536230 CDS YP_002895468.1 237811017 7889979 707773..708321 1 NC_012695.1 hypothetical protein 708321 7889979 GBP346_A0744 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895468.1 707773 D 536230 CDS YP_002895469.1 237811018 7888964 708318..708791 1 NC_012695.1 hypothetical protein 708791 7888964 GBP346_A0745 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895469.1 708318 D 536230 CDS YP_002895470.1 237811019 7888423 708801..709010 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 709010 7888423 GBP346_A0746 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895470.1 708801 D 536230 CDS YP_002895471.1 237811020 7888340 709027..709392 1 NC_012695.1 identified by match to protein family HMM TIGR01352; TonB domain protein 709392 7888340 GBP346_A0747 Burkholderia pseudomallei MSHR346 TonB domain protein YP_002895471.1 709027 D 536230 CDS YP_002895472.1 237811021 7888752 complement(709589..710083) 1 NC_012695.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 710083 moaC 7888752 moaC Burkholderia pseudomallei MSHR346 molybdenum cofactor biosynthesis protein MoaC YP_002895472.1 709589 R 536230 CDS YP_002895473.1 237811022 7890685 complement(710095..710238) 1 NC_012695.1 hypothetical protein 710238 7890685 GBP346_A0749 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895473.1 710095 R 536230 CDS YP_002895474.1 237811023 7886880 710237..711955 1 NC_012695.1 identified by match to protein family HMM PF01435; peptidase, M48 family 711955 7886880 GBP346_A0750 Burkholderia pseudomallei MSHR346 peptidase, M48 family YP_002895474.1 710237 D 536230 CDS YP_002895475.1 237811024 7888843 complement(712069..712221) 1 NC_012695.1 hypothetical protein 712221 7888843 GBP346_A0751 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895475.1 712069 R 536230 CDS YP_002895476.1 237811025 7890904 complement(712263..712886) 1 NC_012695.1 hypothetical protein 712886 7890904 GBP346_A0752 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895476.1 712263 R 536230 CDS YP_002895477.1 237811026 7889400 complement(712879..713913) 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 713913 7889400 GBP346_A0753 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002895477.1 712879 R 536230 CDS YP_002895478.1 237811027 7887476 complement(713933..714379) 1 NC_012695.1 hypothetical protein 714379 7887476 GBP346_A0754 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895478.1 713933 R 536230 CDS YP_002895479.1 237811028 7888084 complement(714511..715551) 1 NC_012695.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195; lipopolysaccharide heptosyltransferase II 715551 rfaF 7888084 rfaF Burkholderia pseudomallei MSHR346 lipopolysaccharide heptosyltransferase II YP_002895479.1 714511 R 536230 CDS YP_002895480.1 237811029 7887217 complement(715679..715876) 1 NC_012695.1 hypothetical protein 715876 7887217 GBP346_A0756 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895480.1 715679 R 536230 CDS YP_002895481.1 237811030 7890759 complement(715942..716865) 1 NC_012695.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 716865 ilvE_1 7890759 ilvE_1 Burkholderia pseudomallei MSHR346 branched-chain amino acid aminotransferase YP_002895481.1 715942 R 536230 CDS YP_002895482.1 237811031 7888299 717087..717836 1 NC_012695.1 identified by match to protein family HMM PF03591; AzlC family protein 717836 7888299 GBP346_A0758 Burkholderia pseudomallei MSHR346 AzlC family protein YP_002895482.1 717087 D 536230 CDS YP_002895483.1 237811032 7889601 717833..718156 1 NC_012695.1 identified by match to protein family HMM PF05437; branched-chain amino acid transport 718156 7889601 GBP346_A0759 Burkholderia pseudomallei MSHR346 branched-chain amino acid transport YP_002895483.1 717833 D 536230 CDS YP_002895484.1 237811033 7889250 718288..719616 1 NC_012695.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 719616 pgk 7889250 pgk Burkholderia pseudomallei MSHR346 phosphoglycerate kinase YP_002895484.1 718288 D 536230 CDS YP_002895485.1 237811034 7890880 719697..719972 1 NC_012695.1 hypothetical protein 719972 7890880 GBP346_A0761 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895485.1 719697 D 536230 CDS YP_002895486.1 237811035 7889608 719951..721387 1 NC_012695.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 721387 pyk_1 7889608 pyk_1 Burkholderia pseudomallei MSHR346 pyruvate kinase YP_002895486.1 719951 D 536230 CDS YP_002895487.1 237811036 7888371 721668..722732 1 NC_012695.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 722732 fba 7888371 fba Burkholderia pseudomallei MSHR346 fructose-1,6-bisphosphate aldolase YP_002895487.1 721668 D 536230 CDS YP_002895488.1 237811037 7887767 722922..723812 1 NC_012695.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 723812 purC 7887767 purC Burkholderia pseudomallei MSHR346 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002895488.1 722922 D 536230 CDS YP_002895489.1 237811038 7887336 723848..724366 1 NC_012695.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit 724366 purE 7887336 purE Burkholderia pseudomallei MSHR346 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_002895489.1 723848 D 536230 CDS YP_002895490.1 237811039 7890507 724446..725642 1 NC_012695.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 725642 purK 7890507 purK Burkholderia pseudomallei MSHR346 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002895490.1 724446 D 536230 CDS YP_002895491.1 237811040 7889873 725654..726679 1 NC_012695.1 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC family protein 726679 7889873 GBP346_A0767 Burkholderia pseudomallei MSHR346 Sua5/YciO/YrdC family protein YP_002895491.1 725654 D 536230 CDS YP_002895492.1 237811041 7889220 complement(726925..728064) 1 NC_012695.1 lipolytic protein G-D-S-L family 728064 7889220 GBP346_A0768 Burkholderia pseudomallei MSHR346 lipolytic protein G-D-S-L family YP_002895492.1 726925 R 536230 CDS YP_002895493.1 237811042 7887747 complement(728169..729086) 1 NC_012695.1 identified by match to protein family HMM PF04116; sterol desaturase family protein 729086 7887747 GBP346_A0769 Burkholderia pseudomallei MSHR346 sterol desaturase family protein YP_002895493.1 728169 R 536230 CDS YP_002895494.1 237811043 7889690 complement(729295..729546) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 729546 7889690 GBP346_A0770 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895494.1 729295 R 536230 CDS YP_002895495.1 237811044 7887326 complement(729522..731099) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 731099 dacB 7887326 dacB Burkholderia pseudomallei MSHR346 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_002895495.1 729522 R 536230 CDS YP_002895496.1 237811045 7890198 731070..731258 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 731258 7890198 GBP346_A0772 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895496.1 731070 D 536230 CDS YP_002895497.1 237811046 7890654 731092..731901 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 731901 7890654 GBP346_A0773 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002895497.1 731092 D 536230 CDS YP_002895498.1 237811047 7887323 731905..733221 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 733221 7887323 GBP346_A0774 Burkholderia pseudomallei MSHR346 sensor histidine kinase YP_002895498.1 731905 D 536230 CDS YP_002895499.1 237811048 7888792 733357..733626 1 NC_012695.1 hypothetical protein 733626 7888792 GBP346_A0775 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895499.1 733357 D 536230 CDS YP_002895500.1 237811049 7887367 733683..735170 1 NC_012695.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease 735170 7887367 GBP346_A0776 Burkholderia pseudomallei MSHR346 serine protease YP_002895500.1 733683 D 536230 CDS YP_002895501.1 237811050 7888284 735330..735752 1 NC_012695.1 hypothetical protein 735752 7888284 GBP346_A0777 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895501.1 735330 D 536230 CDS YP_002895502.1 237811051 7889828 735880..736245 1 NC_012695.1 identified by match to protein family HMM PF04248; outer membrane protein 736245 7889828 GBP346_A0778 Burkholderia pseudomallei MSHR346 outer membrane protein YP_002895502.1 735880 D 536230 CDS YP_002895503.1 237811052 7886879 736273..737001 1 NC_012695.1 identified by match to protein family HMM PF06240; carbon monoxide dehydrogenase family protein 737001 7886879 GBP346_A0779 Burkholderia pseudomallei MSHR346 carbon monoxide dehydrogenase family protein YP_002895503.1 736273 D 536230 CDS YP_002895504.1 237811053 7890663 complement(737328..737963) 1 NC_012695.1 identified by match to protein family HMM PF00440; match to protein family HMM PF08361; multidrug efflux pump repressor protein BpeR 737963 7890663 GBP346_A0780 Burkholderia pseudomallei MSHR346 multidrug efflux pump repressor protein BpeR YP_002895504.1 737328 R 536230 CDS YP_002895505.1 237811054 7886904 738207..738353 1 NC_012695.1 hypothetical protein 738353 7886904 GBP346_A0781 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895505.1 738207 D 536230 CDS YP_002895506.1 237811055 7890697 738373..739635 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; periplasmic linker protein 739635 7890697 GBP346_A0782 Burkholderia pseudomallei MSHR346 periplasmic linker protein YP_002895506.1 738373 D 536230 CDS YP_002895507.1 237811056 7887379 739651..742851 1 NC_012695.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; AcrB protein 742851 7887379 GBP346_A0783 Burkholderia pseudomallei MSHR346 AcrB protein YP_002895507.1 739651 D 536230 CDS YP_002895508.1 237811057 7890224 742855..744399 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane protein OprM 744399 7890224 GBP346_A0784 Burkholderia pseudomallei MSHR346 outer membrane protein OprM YP_002895508.1 742855 D 536230 CDS YP_002895509.1 237811058 7887560 744487..744699 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 744699 7887560 GBP346_A0786 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895509.1 744487 D 536230 CDS YP_002895510.1 237811059 7890807 complement(744678..744902) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 744902 7890807 GBP346_A0785 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895510.1 744678 R 536230 CDS YP_002895511.1 237811060 7890446 complement(744990..746363) 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease 746363 7890446 GBP346_A0787 Burkholderia pseudomallei MSHR346 xanthine permease YP_002895511.1 744990 R 536230 CDS YP_002895512.1 237811061 7889863 746764..748188 1 NC_012695.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, FGGY family 748188 7889863 GBP346_A0788 Burkholderia pseudomallei MSHR346 carbohydrate kinase, FGGY family YP_002895512.1 746764 D 536230 CDS YP_002895513.1 237811062 7889308 complement(748448..749482) 1 NC_012695.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; transcriptional regulator, AraC family 749482 7889308 GBP346_A0789 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002895513.1 748448 R 536230 CDS YP_002895514.1 237811063 7890316 749687..750793 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02818; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 750793 7890316 GBP346_A0790 Burkholderia pseudomallei MSHR346 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_002895514.1 749687 D 536230 CDS YP_002895515.1 237811064 7888040 750807..751667 1 NC_012695.1 identified by match to protein family HMM PF00756; match to protein family HMM TIGR02821; S-formylglutathione hydrolase 751667 fghA 7888040 fghA Burkholderia pseudomallei MSHR346 S-formylglutathione hydrolase YP_002895515.1 750807 D 536230 CDS YP_002895516.1 237811065 7887571 complement(751812..752636) 1 NC_012695.1 identified by match to protein family HMM PF00950; ABC-3 protein 752636 7887571 GBP346_A0792 Burkholderia pseudomallei MSHR346 ABC-3 protein YP_002895516.1 751812 R 536230 CDS YP_002895517.1 237811066 7890465 complement(752596..753456) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 753456 7890465 GBP346_A0793 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895517.1 752596 R 536230 CDS YP_002895518.1 237811067 7887909 complement(753491..754453) 1 NC_012695.1 identified by match to protein family HMM PF01297; putative cation ABC transporter, periplasmic cation-binding protein 754453 7887909 GBP346_A0794 Burkholderia pseudomallei MSHR346 putative cation ABC transporter, periplasmic cation-binding protein YP_002895518.1 753491 R 536230 CDS YP_002895519.1 237811068 7889031 complement(754643..755107) 1 NC_012695.1 identified by match to protein family HMM PF01475; transcriptional regulator, Fur family 755107 7889031 GBP346_A0795 Burkholderia pseudomallei MSHR346 transcriptional regulator, Fur family YP_002895519.1 754643 R 536230 CDS YP_002895520.1 237811069 7890049 755246..755404 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 755404 7890049 GBP346_A0796 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895520.1 755246 D 536230 CDS YP_002895521.1 237811070 7889369 755359..756177 1 NC_012695.1 Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 756177 7889369 GBP346_A0797 Burkholderia pseudomallei MSHR346 sorbitol dehydrogenase YP_002895521.1 755359 D 536230 CDS YP_002895522.1 237811071 7886956 756182..757138 1 NC_012695.1 identified by match to protein family HMM PF00294; kinase, PfkB family 757138 7886956 GBP346_A0798 Burkholderia pseudomallei MSHR346 kinase, PfkB family YP_002895522.1 756182 D 536230 CDS YP_002895523.1 237811072 7889275 757126..758598 1 NC_012695.1 identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810; D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 758598 7889275 GBP346_A0799 Burkholderia pseudomallei MSHR346 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit YP_002895523.1 757126 D 536230 CDS YP_002895524.1 237811073 7889928 758649..759977 1 NC_012695.1 identified by match to protein family HMM PF01547; mannitol ABC transporter, periplasmic mannitol-binding protein 759977 7889928 GBP346_A0800 Burkholderia pseudomallei MSHR346 mannitol ABC transporter, periplasmic mannitol-binding protein YP_002895524.1 758649 D 536230 CDS YP_002895525.1 237811074 7888026 759974..761029 1 NC_012695.1 identified by match to protein family HMM PF00528; putative sorbitol/mannitol ABC transporter, permease protein 761029 7888026 GBP346_A0801 Burkholderia pseudomallei MSHR346 putative sorbitol/mannitol ABC transporter, permease protein YP_002895525.1 759974 D 536230 CDS YP_002895526.1 237811075 7887519 761026..761892 1 NC_012695.1 identified by match to protein family HMM PF00528; mannitol ABC transporter, permease protein 761892 7887519 GBP346_A0802 Burkholderia pseudomallei MSHR346 mannitol ABC transporter, permease protein YP_002895526.1 761026 D 536230 CDS YP_002895527.1 237811076 7888417 761889..762587 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase, subfamily IA, variant 3 762587 7888417 GBP346_A0803 Burkholderia pseudomallei MSHR346 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_002895527.1 761889 D 536230 CDS YP_002895528.1 237811077 7887970 762648..763760 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; lactose transport ATP-binding protein LacK 763760 7887970 GBP346_A0805 Burkholderia pseudomallei MSHR346 lactose transport ATP-binding protein LacK YP_002895528.1 762648 D 536230 CDS YP_002895529.1 237811078 7887112 complement(763726..763950) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 763950 7887112 GBP346_A0804 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895529.1 763726 R 536230 CDS YP_002895530.1 237811079 7889806 complement(763947..765500) 1 NC_012695.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain protein 765500 7889806 GBP346_A0806 Burkholderia pseudomallei MSHR346 Tat pathway signal sequence domain protein YP_002895530.1 763947 R 536230 CDS YP_002895531.1 237811080 7889894 complement(765645..766529) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 766529 7889894 GBP346_A0807 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895531.1 765645 R 536230 CDS YP_002895532.1 237811081 7889304 766667..767863 1 NC_012695.1 identified by match to protein family HMM PF00144; beta-lactamase 767863 7889304 GBP346_A0808 Burkholderia pseudomallei MSHR346 beta-lactamase YP_002895532.1 766667 D 536230 CDS YP_002895533.1 237811082 7887343 767860..769071 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 769071 7887343 GBP346_A0809 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895533.1 767860 D 536230 CDS YP_002895534.1 237811083 7890217 complement(769233..770180) 1 NC_012695.1 identified by match to protein family HMM PF04198; putative transcriptional regulator 770180 7890217 GBP346_A0810 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002895534.1 769233 R 536230 CDS YP_002895535.1 237811084 7888801 complement(770267..771748) 1 NC_012695.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; xylulokinase 771748 xylB_1 7888801 xylB_1 Burkholderia pseudomallei MSHR346 xylulokinase YP_002895535.1 770267 R 536230 CDS YP_002895536.1 237811085 7889471 complement(771785..773302) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01232; match to protein family HMM PF08125; D-arabinitol 4-dehydrogenase 773302 7889471 GBP346_A0812 Burkholderia pseudomallei MSHR346 D-arabinitol 4-dehydrogenase YP_002895536.1 771785 R 536230 CDS YP_002895537.1 237811086 7886785 complement(773474..774490) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 774490 7886785 GBP346_A0813 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895537.1 773474 R 536230 CDS YP_002895538.1 237811087 7890267 774489..776108 1 NC_012695.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 776108 7890267 GBP346_A0814 Burkholderia pseudomallei MSHR346 benzoylformate decarboxylase YP_002895538.1 774489 D 536230 CDS YP_002895539.1 237811088 7889006 776244..777695 1 NC_012695.1 identified by match to protein family HMM PF00171; salicylaldehyde dehydrogenase 777695 7889006 GBP346_A0815 Burkholderia pseudomallei MSHR346 salicylaldehyde dehydrogenase YP_002895539.1 776244 D 536230 CDS YP_002895540.1 237811089 7887899 777700..778656 1 NC_012695.1 identified by match to protein family HMM PF02558; match to protein family HMM PF03721; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 778656 panE_1 7887899 panE_1 Burkholderia pseudomallei MSHR346 2-dehydropantoate 2-reductase YP_002895540.1 777700 D 536230 CDS YP_002895541.1 237811090 7887574 complement(779134..779322) 1 NC_012695.1 hypothetical protein 779322 7887574 GBP346_A0817 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895541.1 779134 R 536230 CDS YP_002895542.1 237811091 7888576 779332..780786 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 780786 7888576 GBP346_A0818 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895542.1 779332 D 536230 CDS YP_002895543.1 237811092 7886835 complement(780812..781747) 1 NC_012695.1 identified by match to protein family HMM PF03301; match to protein family HMM TIGR03036; tryptophan 2,3-dioxygenase 781747 kynA 7886835 kynA Burkholderia pseudomallei MSHR346 tryptophan 2,3-dioxygenase YP_002895543.1 780812 R 536230 CDS YP_002895544.1 237811093 7889100 complement(781831..783081) 1 NC_012695.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01814; kynureninase 783081 kynU 7889100 kynU Burkholderia pseudomallei MSHR346 kynureninase YP_002895544.1 781831 R 536230 CDS YP_002895545.1 237811094 7890542 complement(783123..783851) 1 NC_012695.1 identified by match to protein family HMM PF04199; match to protein family HMM TIGR03035; arylformamidase 783851 kynB 7890542 kynB Burkholderia pseudomallei MSHR346 arylformamidase YP_002895545.1 783123 R 536230 CDS YP_002895546.1 237811095 7890028 783894..784397 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 784397 7890028 GBP346_A0823 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002895546.1 783894 D 536230 CDS YP_002895547.1 237811096 7887633 complement(784384..784899) 1 NC_012695.1 identified by match to protein family HMM PF01613; flavin reductase domain protein 784899 7887633 GBP346_A0822 Burkholderia pseudomallei MSHR346 flavin reductase domain protein YP_002895547.1 784384 R 536230 CDS YP_002895548.1 237811097 7890872 784968..785831 1 NC_012695.1 identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide-methionine (S)-S-oxide reductase 785831 7890872 GBP346_A0824 Burkholderia pseudomallei MSHR346 peptide-methionine (S)-S-oxide reductase YP_002895548.1 784968 D 536230 CDS YP_002895549.1 237811098 7887048 complement(785877..786218) 1 NC_012695.1 2',5' RNA ligase 786218 7887048 GBP346_A0825 Burkholderia pseudomallei MSHR346 2',5' RNA ligase YP_002895549.1 785877 R 536230 CDS YP_002895550.1 237811099 7889595 complement(786188..787747) 1 NC_012695.1 identified by match to protein family HMM PF01904; hypothetical protein 787747 7889595 GBP346_A0826 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895550.1 786188 R 536230 CDS YP_002895551.1 237811100 7890064 complement(787774..788994) 1 NC_012695.1 identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase 788994 7890064 GBP346_A0827 Burkholderia pseudomallei MSHR346 cyclopropane-fatty-acyl-phospholipid synthase YP_002895551.1 787774 R 536230 CDS YP_002895552.1 237811101 7889983 complement(789126..789770) 1 NC_012695.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 789770 pdxH 7889983 pdxH Burkholderia pseudomallei MSHR346 pyridoxamine 5'-phosphate oxidase YP_002895552.1 789126 R 536230 CDS YP_002895553.1 237811102 7887969 789904..790770 1 NC_012695.1 identified by match to protein family HMM PF00899; ThiF family protein 790770 7887969 GBP346_A0829 Burkholderia pseudomallei MSHR346 ThiF family protein YP_002895553.1 789904 D 536230 CDS YP_002895554.1 237811103 7890806 complement(791043..791891) 1 NC_012695.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 791891 7890806 GBP346_A0830 Burkholderia pseudomallei MSHR346 thioredoxin YP_002895554.1 791043 R 536230 CDS YP_002895555.1 237811104 7887244 complement(791945..792826) 1 NC_012695.1 identified by match to protein family HMM PF02678; match to protein family HMM PF05726; pirin domain protein 792826 7887244 GBP346_A0831 Burkholderia pseudomallei MSHR346 pirin domain protein YP_002895555.1 791945 R 536230 CDS YP_002895556.1 237811105 7886737 793011..793895 1 NC_012695.1 identified by match to protein family HMM PF00892; probable amino-acid metabolite efflux pump 793895 7886737 GBP346_A0832 Burkholderia pseudomallei MSHR346 probable amino-acid metabolite efflux pump YP_002895556.1 793011 D 536230 CDS YP_002895557.1 237811106 7890324 794112..794231 1 NC_012695.1 hypothetical protein 794231 7890324 GBP346_A0833 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895557.1 794112 D 536230 CDS YP_002895558.1 237811107 7887111 complement(794431..795987) 1 NC_012695.1 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase AmiC 795987 7887111 GBP346_A0834 Burkholderia pseudomallei MSHR346 N-acetylmuramoyl-L-alanine amidase AmiC YP_002895558.1 794431 R 536230 CDS YP_002895559.1 237811108 7889976 complement(795969..796523) 1 NC_012695.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 796523 7889976 GBP346_A0835 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895559.1 795969 R 536230 CDS YP_002895560.1 237811109 7887848 796541..797770 1 NC_012695.1 identified by match to protein family HMM PF08331; match to protein family HMM TIGR00276; putative iron-sulfur cluster-binding protein 797770 7887848 GBP346_A0836 Burkholderia pseudomallei MSHR346 putative iron-sulfur cluster-binding protein YP_002895560.1 796541 D 536230 CDS YP_002895561.1 237811110 7890591 797841..798308 1 NC_012695.1 identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA-protein-cysteine S-methyltransferase 798308 7890591 GBP346_A0837 Burkholderia pseudomallei MSHR346 methylated-DNA-protein-cysteine S-methyltransferase YP_002895561.1 797841 D 536230 CDS YP_002895562.1 237811111 7890136 798308..799309 1 NC_012695.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 799309 xerD 7890136 xerD Burkholderia pseudomallei MSHR346 site-specific tyrosine recombinase XerD YP_002895562.1 798308 D 536230 CDS YP_002895563.1 237811112 7890282 complement(799594..801306) 1 NC_012695.1 identified by match to protein family HMM PF00501; AMP-binding protein 801306 7890282 GBP346_A0839 Burkholderia pseudomallei MSHR346 AMP-binding protein YP_002895563.1 799594 R 536230 CDS YP_002895564.1 237811113 7886788 801289..801780 1 NC_012695.1 identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/ebsC protein 801780 ybaK 7886788 ybaK Burkholderia pseudomallei MSHR346 YbaK/ebsC protein YP_002895564.1 801289 D 536230 CDS YP_002895565.1 237811114 7887825 801889..802500 1 NC_012695.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 802500 7887825 GBP346_A0841 Burkholderia pseudomallei MSHR346 putative glycerol-3-phosphate acyltransferase PlsY YP_002895565.1 801889 D 536230 CDS YP_002895566.1 237811115 7887569 complement(802730..803215) 1 NC_012695.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 803215 7887569 GBP346_A0842 Burkholderia pseudomallei MSHR346 putative nucleotide-binding protein YP_002895566.1 802730 R 536230 CDS YP_002895567.1 237811116 7887299 803358..804401 1 NC_012695.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 804401 murB 7887299 murB Burkholderia pseudomallei MSHR346 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002895567.1 803358 D 536230 CDS YP_002895568.1 237811117 7886709 complement(804587..805516) 1 NC_012695.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 805516 argF_1 7886709 argF_1 Burkholderia pseudomallei MSHR346 ornithine carbamoyltransferase YP_002895568.1 804587 R 536230 CDS YP_002895569.1 237811118 7889373 805942..806265 1 NC_012695.1 hypothetical protein 806265 7889373 GBP346_A0845 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895569.1 805942 D 536230 CDS YP_002895570.1 237811119 7889664 complement(806494..806772) 1 NC_012695.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 806772 rpsT 7889664 rpsT Burkholderia pseudomallei MSHR346 30S ribosomal protein S20 YP_002895570.1 806494 R 536230 CDS YP_002895571.1 237811120 7888150 806949..808727 1 NC_012695.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 808727 mviN 7888150 mviN Burkholderia pseudomallei MSHR346 integral membrane protein MviN YP_002895571.1 806949 D 536230 CDS YP_002895572.1 237811121 7888352 808737..809579 1 NC_012695.1 hypothetical protein 809579 7888352 GBP346_A0848 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895572.1 808737 D 536230 CDS YP_002895573.1 237811122 7887317 complement(809848..810807) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 810807 7887317 GBP346_A0849 Burkholderia pseudomallei MSHR346 oxidoreductase, short chain dehydrogenase/reductase family YP_002895573.1 809848 R 536230 CDS YP_002895574.1 237811123 7888867 complement(810804..811466) 1 NC_012695.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 811466 adk 7888867 adk Burkholderia pseudomallei MSHR346 adenylate kinase YP_002895574.1 810804 R 536230 CDS YP_002895575.1 237811124 7887625 complement(811675..812466) 1 NC_012695.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 812466 kdsB 7887625 kdsB Burkholderia pseudomallei MSHR346 3-deoxy-manno-octulosonate cytidylyltransferase YP_002895575.1 811675 R 536230 CDS YP_002895576.1 237811125 7889005 complement(812640..812846) 1 NC_012695.1 identified by match to protein family HMM PF03966; tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) 812846 7889005 GBP346_A0852 Burkholderia pseudomallei MSHR346 tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) YP_002895576.1 812640 R 536230 CDS YP_002895577.1 237811126 7887075 complement(812827..813957) 1 NC_012695.1 Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 813957 lpxK 7887075 lpxK Burkholderia pseudomallei MSHR346 tetraacyldisaccharide 4'-kinase YP_002895577.1 812827 R 536230 CDS YP_002895578.1 237811127 7888797 complement(814081..814311) 1 NC_012695.1 hypothetical protein 814311 7888797 GBP346_A0854 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895578.1 814081 R 536230 CDS YP_002895579.1 237811128 7889221 814306..815688 1 NC_012695.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 815688 xseA 7889221 xseA Burkholderia pseudomallei MSHR346 exodeoxyribonuclease VII large subunit YP_002895579.1 814306 D 536230 CDS YP_002895580.1 237811129 7888534 815885..816463 1 NC_012695.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase (Fe) 816463 7888534 GBP346_A0856 Burkholderia pseudomallei MSHR346 superoxide dismutase (Fe) YP_002895580.1 815885 D 536230 CDS YP_002895581.1 237811130 7890489 816733..818166 1 NC_012695.1 putative lipoprotein 818166 7890489 GBP346_A0857 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895581.1 816733 D 536230 CDS YP_002895582.1 237811131 7889871 818331..818546 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 818546 7889871 GBP346_A0858 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895582.1 818331 D 536230 CDS YP_002895583.1 237811132 7887892 complement(819044..820249) 1 NC_012695.1 identified by match to protein family HMM PF02417; match to protein family HMM TIGR00937; chromate transporter, chromate ion transporter 820249 7887892 GBP346_A0859 Burkholderia pseudomallei MSHR346 chromate transporter, chromate ion transporter YP_002895583.1 819044 R 536230 CDS YP_002895584.1 237811133 7889050 complement(820465..821211) 1 NC_012695.1 identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 821211 7889050 GBP346_A0860 Burkholderia pseudomallei MSHR346 cyclic nucleotide-binding protein YP_002895584.1 820465 R 536230 CDS YP_002895585.1 237811134 7886974 821296..821823 1 NC_012695.1 identified by match to protein family HMM PF06127; hypothetical protein 821823 7886974 GBP346_A0861 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895585.1 821296 D 536230 CDS YP_002895586.1 237811135 7889570 821839..822861 1 NC_012695.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 822861 panE_2 7889570 panE_2 Burkholderia pseudomallei MSHR346 2-dehydropantoate 2-reductase YP_002895586.1 821839 D 536230 CDS YP_002895587.1 237811136 7888697 complement(823034..823207) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 823207 7888697 GBP346_A0863 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895587.1 823034 R 536230 CDS YP_002895588.1 237811137 7887691 823354..823959 1 NC_012695.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 823959 7887691 GBP346_A0864 Burkholderia pseudomallei MSHR346 methyltransferase YP_002895588.1 823354 D 536230 CDS YP_002895589.1 237811138 7888648 complement(824091..825359) 1 NC_012695.1 identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase 825359 7888648 GBP346_A0865 Burkholderia pseudomallei MSHR346 cyclic diguanylate phosphodiesterase YP_002895589.1 824091 R 536230 CDS YP_002895590.1 237811139 7889995 825420..825554 1 NC_012695.1 hypothetical protein 825554 7889995 GBP346_A0866 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895590.1 825420 D 536230 CDS YP_002895591.1 237811140 7890032 complement(826038..827435) 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family 827435 7890032 GBP346_A0867 Burkholderia pseudomallei MSHR346 drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family YP_002895591.1 826038 R 536230 CDS YP_002895592.1 237811141 7890105 827774..828109 1 NC_012695.1 hypothetical protein 828109 7890105 GBP346_A0869 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895592.1 827774 D 536230 CDS YP_002895593.1 237811142 7886896 complement(828082..829443) 1 NC_012695.1 identified by match to protein family HMM PF00285; match to protein family HMM PF00376; citrate synthase family protein 829443 7886896 GBP346_A0868 Burkholderia pseudomallei MSHR346 citrate synthase family protein YP_002895593.1 828082 R 536230 CDS YP_002895594.1 237811143 7888559 829411..829569 1 NC_012695.1 hypothetical protein 829569 7888559 GBP346_A0870 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895594.1 829411 D 536230 CDS YP_002895595.1 237811144 7889592 complement(829584..829727) 1 NC_012695.1 hypothetical protein 829727 7889592 GBP346_A0871 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895595.1 829584 R 536230 CDS YP_002895596.1 237811145 7890884 829781..829972 1 NC_012695.1 hypothetical protein 829972 7890884 GBP346_A0872 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895596.1 829781 D 536230 CDS YP_002895597.1 237811146 7887331 829969..830190 1 NC_012695.1 hypothetical protein 830190 7887331 GBP346_A0874 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895597.1 829969 D 536230 CDS YP_002895598.1 237811147 7889296 complement(830160..830906) 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; transcriptional regulator, GntR family 830906 7889296 GBP346_A0873 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002895598.1 830160 R 536230 CDS YP_002895599.1 237811148 7890444 831060..831920 1 NC_012695.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 831920 7890444 GBP346_A0875 Burkholderia pseudomallei MSHR346 oxidoreductase, aldo/keto reductase family YP_002895599.1 831060 D 536230 CDS YP_002895600.1 237811149 7887239 831984..832160 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 832160 7887239 GBP346_A0876 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895600.1 831984 D 536230 CDS YP_002895601.1 237811150 7888770 832221..832412 1 NC_012695.1 hypothetical protein 832412 7888770 GBP346_A0877 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895601.1 832221 D 536230 CDS YP_002895602.1 237811151 7889803 832440..834347 1 NC_012695.1 hypothetical protein 834347 7889803 GBP346_A0878 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895602.1 832440 D 536230 CDS YP_002895603.1 237811152 7887020 834302..834955 1 NC_012695.1 hypothetical protein 834955 7887020 GBP346_A0879 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895603.1 834302 D 536230 CDS YP_002895604.1 237811153 7887594 complement(835404..837518) 1 NC_012695.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 837518 fusA_1 7887594 fusA_1 Burkholderia pseudomallei MSHR346 elongation factor G YP_002895604.1 835404 R 536230 CDS YP_002895605.1 237811154 7888742 complement(837643..837831) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 837831 7888742 GBP346_A0881 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895605.1 837643 R 536230 CDS YP_002895606.1 237811155 7887470 complement(837828..838337) 1 NC_012695.1 identified by match to protein family HMM PF02643; exported protein 838337 7887470 GBP346_A0882 Burkholderia pseudomallei MSHR346 exported protein YP_002895606.1 837828 R 536230 CDS YP_002895607.1 237811156 7887844 complement(839011..839589) 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase E 839589 7887844 GBP346_A0883 Burkholderia pseudomallei MSHR346 ribosomal large subunit pseudouridine synthase E YP_002895607.1 839011 R 536230 CDS YP_002895608.1 237811157 7890388 839857..841116 1 NC_012695.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 841116 icd 7890388 icd Burkholderia pseudomallei MSHR346 isocitrate dehydrogenase YP_002895608.1 839857 D 536230 CDS YP_002895609.1 237811158 7888246 complement(841089..841271) 1 NC_012695.1 hypothetical protein 841271 7888246 GBP346_A0884 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895609.1 841089 R 536230 CDS YP_002895610.1 237811159 7889766 841284..842900 1 NC_012695.1 identified by match to protein family HMM PF07731; match to protein family HMM PF07732; multicopper oxidase family protein 842900 7889766 GBP346_A0886 Burkholderia pseudomallei MSHR346 multicopper oxidase family protein YP_002895610.1 841284 D 536230 CDS YP_002895611.1 237811160 7889473 complement(843030..843233) 1 NC_012695.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein 843233 7889473 GBP346_A0887 Burkholderia pseudomallei MSHR346 cold-shock DNA-binding domain protein YP_002895611.1 843030 R 536230 CDS YP_002895612.1 237811161 7887804 843766..844080 1 NC_012695.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 844080 clpS 7887804 clpS Burkholderia pseudomallei MSHR346 ATP-dependent Clp protease adaptor protein ClpS YP_002895612.1 843766 D 536230 CDS YP_002895613.1 237811162 7888343 844077..846377 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease ATP-binding subunit ClpA 846377 clpA 7888343 clpA Burkholderia pseudomallei MSHR346 ATP-dependent Clp protease ATP-binding subunit ClpA YP_002895613.1 844077 D 536230 CDS YP_002895614.1 237811163 7887465 846477..847856 1 NC_012695.1 identified by match to protein family HMM PF00324; phenylalanine-specific permease 847856 7887465 GBP346_A0890 Burkholderia pseudomallei MSHR346 phenylalanine-specific permease YP_002895614.1 846477 D 536230 CDS YP_002895615.1 237811164 7888203 847944..848678 1 NC_012695.1 hypothetical protein 848678 7888203 GBP346_A0891 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895615.1 847944 D 536230 CDS YP_002895616.1 237811165 7886849 848843..849625 1 NC_012695.1 identified by match to protein family HMM PF03988; hypothetical protein 849625 7886849 GBP346_A0892 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895616.1 848843 D 536230 CDS YP_002895617.1 237811166 7889564 complement(849714..850160) 1 NC_012695.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 850160 dut 7889564 dut Burkholderia pseudomallei MSHR346 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_002895617.1 849714 R 536230 CDS YP_002895618.1 237811167 7888444 complement(850224..851435) 1 NC_012695.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 851435 coaBC 7888444 coaBC Burkholderia pseudomallei MSHR346 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_002895618.1 850224 R 536230 CDS YP_002895619.1 237811168 7887145 complement(851497..851997) 1 NC_012695.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 851997 lspA 7887145 lspA Burkholderia pseudomallei MSHR346 lipoprotein signal peptidase YP_002895619.1 851497 R 536230 CDS YP_002895620.1 237811169 7888090 complement(851997..854834) 1 NC_012695.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 854834 ileS 7888090 ileS Burkholderia pseudomallei MSHR346 isoleucyl-tRNA synthetase YP_002895620.1 851997 R 536230 CDS YP_002895621.1 237811170 7889607 complement(854946..855983) 1 NC_012695.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 855983 ribF 7889607 ribF Burkholderia pseudomallei MSHR346 bifunctional riboflavin kinase/FMN adenylyltransferase YP_002895621.1 854946 R 536230 CDS YP_002895622.1 237811171 7889759 856063..856725 1 NC_012695.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 856725 purN 7889759 purN Burkholderia pseudomallei MSHR346 phosphoribosylglycinamide formyltransferase YP_002895622.1 856063 D 536230 CDS YP_002895623.1 237811172 7889427 856722..857984 1 NC_012695.1 identified by match to protein family HMM PF01189; rRNA small subunit methyltransferase B 857984 7889427 GBP346_A0899 Burkholderia pseudomallei MSHR346 rRNA small subunit methyltransferase B YP_002895623.1 856722 D 536230 CDS YP_002895624.1 237811173 7887934 857996..859339 1 NC_012695.1 identified by match to protein family HMM PF00924; transporter, small conductance mechanosensitive ion channel 859339 7887934 GBP346_A0900 Burkholderia pseudomallei MSHR346 transporter, small conductance mechanosensitive ion channel YP_002895624.1 857996 D 536230 CDS YP_002895625.1 237811174 7890579 859545..860741 1 NC_012695.1 identified by match to protein family HMM PF00487; fatty acid desaturase family protein 860741 7890579 GBP346_A0901 Burkholderia pseudomallei MSHR346 fatty acid desaturase family protein YP_002895625.1 859545 D 536230 CDS YP_002895626.1 237811175 7888333 complement(860778..860915) 1 NC_012695.1 hypothetical protein 860915 7888333 GBP346_A0902 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895626.1 860778 R 536230 CDS YP_002895627.1 237811176 7887836 860910..862046 1 NC_012695.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 862046 nadA 7887836 nadA Burkholderia pseudomallei MSHR346 quinolinate synthetase YP_002895627.1 860910 D 536230 CDS YP_002895628.1 237811177 7889883 862043..862927 1 NC_012695.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 862927 nadC 7889883 nadC Burkholderia pseudomallei MSHR346 nicotinate-nucleotide pyrophosphorylase YP_002895628.1 862043 D 536230 CDS YP_002895629.1 237811178 7890394 complement(863120..864832) 1 NC_012695.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 864832 nadB 7890394 nadB Burkholderia pseudomallei MSHR346 L-aspartate oxidase YP_002895629.1 863120 R 536230 CDS YP_002895630.1 237811179 7890177 complement(864889..865056) 1 NC_012695.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 865056 rpmG 7890177 rpmG Burkholderia pseudomallei MSHR346 50S ribosomal protein L33 YP_002895630.1 864889 R 536230 CDS YP_002895631.1 237811180 7889968 complement(865074..865565) 1 NC_012695.1 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; ribosomal protein L28 865565 rpmB 7889968 rpmB Burkholderia pseudomallei MSHR346 ribosomal protein L28 YP_002895631.1 865074 R 536230 CDS YP_002895632.1 237811181 7886855 complement(865601..866443) 1 NC_012695.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 866443 radC 7886855 radC Burkholderia pseudomallei MSHR346 DNA repair protein RadC YP_002895632.1 865601 R 536230 CDS YP_002895633.1 237811182 7889262 866582..867037 1 NC_012695.1 identified by match to protein family HMM PF00254; peptidyl-prolyl cis-trans isomerase, fkbp-type 867037 7889262 GBP346_A0909 Burkholderia pseudomallei MSHR346 peptidyl-prolyl cis-trans isomerase, fkbp-type YP_002895633.1 866582 D 536230 CDS YP_002895634.1 237811183 7889779 867040..868020 1 NC_012695.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 868020 ispH 7889779 ispH Burkholderia pseudomallei MSHR346 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002895634.1 867040 D 536230 CDS YP_002895635.1 237811184 7888206 868310..868798 1 NC_012695.1 hypothetical protein 868798 7888206 GBP346_A0911 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895635.1 868310 D 536230 CDS YP_002895636.1 237811185 7889805 869021..869971 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter 869971 7889805 GBP346_A0912 Burkholderia pseudomallei MSHR346 ABC transporter, hydrophobic amino acid uptake transporter YP_002895636.1 869021 D 536230 CDS YP_002895637.1 237811186 7888290 869982..871151 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter 871151 7888290 GBP346_A0913 Burkholderia pseudomallei MSHR346 ABC transporter, hydrophobic amino acid uptake transporter YP_002895637.1 869982 D 536230 CDS YP_002895638.1 237811187 7889980 871214..871987 1 NC_012695.1 identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein 871987 7889980 GBP346_A0914 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, ATP-binding protein YP_002895638.1 871214 D 536230 CDS YP_002895639.1 237811188 7888225 871999..872703 1 NC_012695.1 identified by match to protein family HMM PF00005; abc transporter, hydrophobic amino acid uptake transporter (haat) family, ATP-binding protein 872703 7888225 GBP346_A0915 Burkholderia pseudomallei MSHR346 abc transporter, hydrophobic amino acid uptake transporter (haat) family, ATP-binding protein YP_002895639.1 871999 D 536230 CDS YP_002895640.1 237811189 7890188 872748..873680 1 NC_012695.1 hypothetical protein 873680 7890188 GBP346_A0916 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895640.1 872748 D 536230 CDS YP_002895641.1 237811190 7887226 complement(873807..874265) 1 NC_012695.1 identified by match to protein family HMM PF00583; putative acetyltransferase 874265 7887226 GBP346_A0917 Burkholderia pseudomallei MSHR346 putative acetyltransferase YP_002895641.1 873807 R 536230 CDS YP_002895642.1 237811191 7887776 complement(874282..875466) 1 NC_012695.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 875466 argD 7887776 argD Burkholderia pseudomallei MSHR346 acetylornithine transaminase protein YP_002895642.1 874282 R 536230 CDS YP_002895643.1 237811192 7889515 complement(875743..876774) 1 NC_012695.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 876774 7889515 GBP346_A0919 Burkholderia pseudomallei MSHR346 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_002895643.1 875743 R 536230 CDS YP_002895644.1 237811193 7890355 876803..877882 1 NC_012695.1 identified by match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 877882 7890355 GBP346_A0921 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase family protein YP_002895644.1 876803 D 536230 CDS YP_002895645.1 237811194 7888234 complement(877875..878147) 1 NC_012695.1 hypothetical protein 878147 7888234 GBP346_A0920 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895645.1 877875 R 536230 CDS YP_002895646.1 237811195 7889785 complement(878180..878902) 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 878902 7889785 GBP346_A0922 Burkholderia pseudomallei MSHR346 RNA pseudouridine synthase family protein YP_002895646.1 878180 R 536230 CDS YP_002895647.1 237811196 7889782 879050..879415 1 NC_012695.1 identified by match to protein family HMM PF04234; copper resistance protein CopC 879415 7889782 GBP346_A0923 Burkholderia pseudomallei MSHR346 copper resistance protein CopC YP_002895647.1 879050 D 536230 CDS YP_002895648.1 237811197 7886892 complement(879438..880487) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 880487 7886892 GBP346_A0924 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895648.1 879438 R 536230 CDS YP_002895649.1 237811198 7887246 complement(880602..881498) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 881498 7887246 GBP346_A0925 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895649.1 880602 R 536230 CDS YP_002895650.1 237811199 7888190 881620..882516 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 882516 7888190 GBP346_A0926 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002895650.1 881620 D 536230 CDS YP_002895651.1 237811200 7890258 complement(882743..883432) 1 NC_012695.1 identified by match to protein family HMM PF03473; mosc domain protein 883432 7890258 GBP346_A0927 Burkholderia pseudomallei MSHR346 mosc domain protein YP_002895651.1 882743 R 536230 CDS YP_002895652.1 237811201 7886701 complement(883447..884343) 1 NC_012695.1 identified by match to protein family HMM PF00701; putative dihydrodipicolinate synthase 884343 7886701 GBP346_A0928 Burkholderia pseudomallei MSHR346 putative dihydrodipicolinate synthase YP_002895652.1 883447 R 536230 CDS YP_002895653.1 237811202 7888599 complement(884425..885330) 1 NC_012695.1 identified by match to protein family HMM PF00596; class II aldolase/adducin domain protein 885330 7888599 GBP346_A0929 Burkholderia pseudomallei MSHR346 class II aldolase/adducin domain protein YP_002895653.1 884425 R 536230 CDS YP_002895654.1 237811203 7886828 885339..885902 1 NC_012695.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 885902 7886828 GBP346_A0930 Burkholderia pseudomallei MSHR346 DNA-binding protein YP_002895654.1 885339 D 536230 CDS YP_002895655.1 237811204 7889093 886001..886201 1 NC_012695.1 hypothetical protein 886201 7889093 GBP346_A0931 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895655.1 886001 D 536230 CDS YP_002895656.1 237811205 7887051 887058..888128 1 NC_012695.1 identified by match to protein family HMM PF08220; match to protein family HMM PF08279; helix-turn-helix type 11 domain protein 888128 7887051 GBP346_A0932 Burkholderia pseudomallei MSHR346 helix-turn-helix type 11 domain protein YP_002895656.1 887058 D 536230 CDS YP_002895657.1 237811206 7888355 888564..888680 1 NC_012695.1 hypothetical protein 888680 7888355 GBP346_A0933 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895657.1 888564 D 536230 CDS YP_002895658.1 237811207 7890814 888901..893010 1 NC_012695.1 hypothetical protein 893010 7890814 GBP346_A0934 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895658.1 888901 D 536230 CDS YP_002895659.1 237811208 7888406 893036..895237 1 NC_012695.1 hypothetical protein 895237 7888406 GBP346_A0935 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895659.1 893036 D 536230 CDS YP_002895660.1 237811209 7888159 complement(895273..896229) 1 NC_012695.1 identified by match to protein family HMM PF00665; integrase core domain protein 896229 7888159 GBP346_A0936 Burkholderia pseudomallei MSHR346 integrase core domain protein YP_002895660.1 895273 R 536230 CDS YP_002895661.1 237811210 7890011 896551..897882 1 NC_012695.1 identified by match to protein family HMM PF00589; phage integrase family protein 897882 7890011 GBP346_A0937 Burkholderia pseudomallei MSHR346 phage integrase family protein YP_002895661.1 896551 D 536230 CDS YP_002895662.1 237811211 7890057 897906..898256 1 NC_012695.1 identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683; probable addiction module killer protein 898256 7890057 GBP346_A0938 Burkholderia pseudomallei MSHR346 probable addiction module killer protein YP_002895662.1 897906 D 536230 CDS YP_002895663.1 237811212 7888937 898264..898548 1 NC_012695.1 putative transcriptional regulator 898548 7888937 GBP346_A0939 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002895663.1 898264 D 536230 CDS YP_002895664.1 237811213 7889099 898662..899342 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 899342 7889099 GBP346_A0940 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895664.1 898662 D 536230 CDS YP_002895665.1 237811214 7889242 900049..901143 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 901143 7889242 GBP346_A0941 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895665.1 900049 D 536230 CDS YP_002895666.1 237811215 7887826 901323..906524 1 NC_012695.1 hypothetical protein 906524 7887826 GBP346_A0942 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895666.1 901323 D 536230 CDS YP_002895667.1 237811216 7886756 complement(906804..908363) 1 NC_012695.1 hypothetical protein 908363 7886756 GBP346_A0943 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895667.1 906804 R 536230 CDS YP_002895668.1 237811217 7888384 908959..909831 1 NC_012695.1 identified by match to protein family HMM PF06067; protein YafZ 909831 7888384 GBP346_A0944 Burkholderia pseudomallei MSHR346 protein YafZ YP_002895668.1 908959 D 536230 CDS YP_002895669.1 237811218 7887149 909792..911954 1 NC_012695.1 identified by match to protein family HMM PF02195; ParB domain protein nuclease 911954 7887149 GBP346_A0945 Burkholderia pseudomallei MSHR346 ParB domain protein nuclease YP_002895669.1 909792 D 536230 CDS YP_002895670.1 237811219 7889887 912106..912225 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 912225 7889887 GBP346_A0946 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895670.1 912106 D 536230 CDS YP_002895671.1 237811220 7888520 912467..913282 1 NC_012695.1 hypothetical protein 913282 7888520 GBP346_A0947 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895671.1 912467 D 536230 CDS YP_002895672.1 237811221 7890357 914090..914404 1 NC_012695.1 identified by match to protein family HMM PF05284; hypothetical protein 914404 7890357 GBP346_A0948 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895672.1 914090 D 536230 CDS YP_002895673.1 237811222 7889754 complement(914770..915813) 1 NC_012695.1 hypothetical protein 915813 7889754 GBP346_A0949 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895673.1 914770 R 536230 CDS YP_002895674.1 237811223 7888829 complement(916051..916344) 1 NC_012695.1 identified by match to protein family HMM PF01381; helix-turn-helix domain protein 916344 7888829 GBP346_A0950 Burkholderia pseudomallei MSHR346 helix-turn-helix domain protein YP_002895674.1 916051 R 536230 CDS YP_002895675.1 237811224 7887028 916567..916914 1 NC_012695.1 hypothetical protein 916914 7887028 GBP346_A0951 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895675.1 916567 D 536230 CDS YP_002895676.1 237811225 7890523 complement(916983..917126) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 917126 7890523 GBP346_A0952 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895676.1 916983 R 536230 CDS YP_002895677.1 237811226 7890725 917256..918005 1 NC_012695.1 hypothetical protein 918005 7890725 GBP346_A0953 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895677.1 917256 D 536230 CDS YP_002895678.1 237811227 7890368 918089..918379 1 NC_012695.1 hypothetical protein 918379 7890368 GBP346_A0954 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895678.1 918089 D 536230 CDS YP_002895679.1 237811228 7890093 918406..919263 1 NC_012695.1 replication protein A 919263 7890093 GBP346_A0955 Burkholderia pseudomallei MSHR346 replication protein A YP_002895679.1 918406 D 536230 CDS YP_002895680.1 237811229 7889033 919517..920155 1 NC_012695.1 identified by match to protein family HMM PF01656; cobyrinic acid ac-diamide synthase 920155 7889033 GBP346_A0956 Burkholderia pseudomallei MSHR346 cobyrinic acid ac-diamide synthase YP_002895680.1 919517 D 536230 CDS YP_002895681.1 237811230 7888021 920143..920415 1 NC_012695.1 hypothetical protein 920415 7888021 GBP346_A0957 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895681.1 920143 D 536230 CDS YP_002895682.1 237811231 7888588 920412..920945 1 NC_012695.1 hypothetical protein 920945 7888588 GBP346_A0958 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895682.1 920412 D 536230 CDS YP_002895683.1 237811232 7886758 920942..921529 1 NC_012695.1 traf peptidase, serine peptidase, merops family s26c 921529 7886758 GBP346_A0959 Burkholderia pseudomallei MSHR346 traf peptidase, serine peptidase, merops family s26c YP_002895683.1 920942 D 536230 CDS YP_002895684.1 237811233 7886961 921965..923926 1 NC_012695.1 hypothetical protein 923926 7886961 GBP346_A0960 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895684.1 921965 D 536230 CDS YP_002895685.1 237811234 7888174 925072..926466 1 NC_012695.1 identified by match to protein family HMM PF00355; match to protein family HMM PF00848; Rieske (2Fe-2S) domain protein 926466 7888174 GBP346_A0961 Burkholderia pseudomallei MSHR346 Rieske (2Fe-2S) domain protein YP_002895685.1 925072 D 536230 CDS YP_002895686.1 237811235 7888632 926463..926939 1 NC_012695.1 identified by match to protein family HMM PF00866; anthranilate dioxygenase small subunit 926939 7888632 GBP346_A0962 Burkholderia pseudomallei MSHR346 anthranilate dioxygenase small subunit YP_002895686.1 926463 D 536230 CDS YP_002895687.1 237811236 7889991 928663..929502 1 NC_012695.1 identified by match to protein family HMM PF00775; match to protein family HMM PF04444; hydroxyquinol 1,2-dioxygenase (1,2-HQD) 929502 7889991 GBP346_A0963 Burkholderia pseudomallei MSHR346 hydroxyquinol 1,2-dioxygenase (1,2-HQD) YP_002895687.1 928663 D 536230 CDS YP_002895688.1 237811237 7888582 929707..930783 1 NC_012695.1 identified by match to protein family HMM PF00465; maleylacetate reductase 930783 7888582 GBP346_A0964 Burkholderia pseudomallei MSHR346 maleylacetate reductase YP_002895688.1 929707 D 536230 CDS YP_002895689.1 237811238 7887348 931006..931860 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07690; 4-hydroxybenzoate transporter 931860 7887348 GBP346_A0965 Burkholderia pseudomallei MSHR346 4-hydroxybenzoate transporter YP_002895689.1 931006 D 536230 CDS YP_002895690.1 237811239 7887315 932160..932309 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 932309 7887315 GBP346_A0966 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895690.1 932160 D 536230 CDS YP_002895691.1 237811240 7890863 932425..933393 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 933393 7890863 GBP346_A0967 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895691.1 932425 D 536230 CDS YP_002895692.1 237811241 7889439 933772..935775 1 NC_012695.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 935775 7889439 GBP346_A0968 Burkholderia pseudomallei MSHR346 conjugal transfer coupling protein TraG YP_002895692.1 933772 D 536230 CDS YP_002895693.1 237811242 7886883 935772..936236 1 NC_012695.1 CopG domain protein DNA-binding domain protein 936236 7886883 GBP346_A0969 Burkholderia pseudomallei MSHR346 CopG domain protein DNA-binding domain protein YP_002895693.1 935772 D 536230 CDS YP_002895694.1 237811243 7888607 936233..937261 1 NC_012695.1 identified by match to protein family HMM PF00437; match to protein family HMM TIGR02782; P-type conjugative transfer ATPase TrbB 937261 trbB 7888607 trbB Burkholderia pseudomallei MSHR346 P-type conjugative transfer ATPase TrbB YP_002895694.1 936233 D 536230 CDS YP_002895695.1 237811244 7887366 937258..937632 1 NC_012695.1 identified by match to protein family HMM PF04956; conjugal transfer protein TrbC 937632 7887366 GBP346_A0971 Burkholderia pseudomallei MSHR346 conjugal transfer protein TrbC YP_002895695.1 937258 D 536230 CDS YP_002895696.1 237811245 7887785 937629..937898 1 NC_012695.1 conjugal transfer protein 937898 7887785 GBP346_A0972 Burkholderia pseudomallei MSHR346 conjugal transfer protein YP_002895696.1 937629 D 536230 CDS YP_002895697.1 237811246 7888397 937909..940371 1 NC_012695.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 940371 7888397 GBP346_A0973 Burkholderia pseudomallei MSHR346 conjugal transfer ATPase TrbE YP_002895697.1 937909 D 536230 CDS YP_002895698.1 237811247 7889577 940368..941132 1 NC_012695.1 identified by match to protein family HMM TIGR02780; conjugal transfer protein TrbJ 941132 trbJ 7889577 trbJ Burkholderia pseudomallei MSHR346 conjugal transfer protein TrbJ YP_002895698.1 940368 D 536230 CDS YP_002895699.1 237811248 7887503 941181..942329 1 NC_012695.1 identified by match to protein family HMM PF04610; match to protein family HMM TIGR02783; P-type conjugative transfer protein TrbL 942329 trbL 7887503 trbL Burkholderia pseudomallei MSHR346 P-type conjugative transfer protein TrbL YP_002895699.1 941181 D 536230 CDS YP_002895700.1 237811249 7887151 942342..943046 1 NC_012695.1 identified by match to protein family HMM PF04585; conjugal transfer protein TrbF 943046 7887151 GBP346_A0976 Burkholderia pseudomallei MSHR346 conjugal transfer protein TrbF YP_002895700.1 942342 D 536230 CDS YP_002895701.1 237811250 7888811 943043..944047 1 NC_012695.1 identified by match to protein family HMM PF03524; match to protein family HMM TIGR02775; P-type conjugative transfer protein TrbG 944047 trbG 7888811 trbG Burkholderia pseudomallei MSHR346 P-type conjugative transfer protein TrbG YP_002895701.1 943043 D 536230 CDS YP_002895702.1 237811251 7887690 944050..945330 1 NC_012695.1 identified by match to protein family HMM PF03743; conjugation TrbI family protein 945330 7887690 GBP346_A0978 Burkholderia pseudomallei MSHR346 conjugation TrbI family protein YP_002895702.1 944050 D 536230 CDS YP_002895703.1 237811252 7889143 945327..945569 1 NC_012695.1 hypothetical protein 945569 7889143 GBP346_A0979 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895703.1 945327 D 536230 CDS YP_002895704.1 237811253 7890425 complement(946517..946909) 1 NC_012695.1 ISPsy5, transposase 946909 7890425 GBP346_A0980 Burkholderia pseudomallei MSHR346 ISPsy5, transposase YP_002895704.1 946517 R 536230 CDS YP_002895705.1 237811254 7887184 947965..948105 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 948105 7887184 GBP346_A0981 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895705.1 947965 D 536230 CDS YP_002895706.1 237811255 7888019 948470..949219 1 NC_012695.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; 3-oxoadipate CoA-transferase, A subunit 949219 7888019 GBP346_A0982 Burkholderia pseudomallei MSHR346 3-oxoadipate CoA-transferase, A subunit YP_002895706.1 948470 D 536230 CDS YP_002895707.1 237811256 7888117 949216..949884 1 NC_012695.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) 949884 7888117 GBP346_A0983 Burkholderia pseudomallei MSHR346 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) YP_002895707.1 949216 D 536230 CDS YP_002895708.1 237811257 7888101 949881..950855 1 NC_012695.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase, NPD 950855 7888101 GBP346_A0984 Burkholderia pseudomallei MSHR346 2-nitropropane dioxygenase, NPD YP_002895708.1 949881 D 536230 CDS YP_002895709.1 237811258 7890636 951834..953105 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; cis,cis-muconate transport protein MucK 953105 7890636 GBP346_A0985 Burkholderia pseudomallei MSHR346 cis,cis-muconate transport protein MucK YP_002895709.1 951834 D 536230 CDS YP_002895710.1 237811259 7888365 953158..953337 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; extracellular ligand-binding receptor 953337 7888365 GBP346_A0986 Burkholderia pseudomallei MSHR346 extracellular ligand-binding receptor YP_002895710.1 953158 D 536230 CDS YP_002895711.1 237811260 7887929 953367..953501 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 953501 7887929 GBP346_A0987 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895711.1 953367 D 536230 CDS YP_002895712.1 237811261 7889137 953856..955874 1 NC_012695.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 955874 7889137 GBP346_A0988 Burkholderia pseudomallei MSHR346 acetoacetyl-CoA synthetase YP_002895712.1 953856 D 536230 CDS YP_002895713.1 237811262 7889567 956004..957452 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 957452 7889567 GBP346_A0989 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895713.1 956004 D 536230 CDS YP_002895714.1 237811263 7889727 complement(957503..958486) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 958486 7889727 GBP346_A0990 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895714.1 957503 R 536230 CDS YP_002895715.1 237811264 7888071 complement(958641..959474) 1 NC_012695.1 identified by match to protein family HMM PF00665; integrase core domain protein 959474 7888071 GBP346_A0991 Burkholderia pseudomallei MSHR346 integrase core domain protein YP_002895715.1 958641 R 536230 CDS YP_002895716.1 237811265 7888972 complement(959498..959761) 1 NC_012695.1 identified by match to protein family HMM PF01527; transposase family protein 959761 7888972 GBP346_A0992 Burkholderia pseudomallei MSHR346 transposase family protein YP_002895716.1 959498 R 536230 CDS YP_002895717.1 237811266 7888363 960662..962047 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; 4-hydroxybenzoate transporter 962047 7888363 GBP346_A0993 Burkholderia pseudomallei MSHR346 4-hydroxybenzoate transporter YP_002895717.1 960662 D 536230 CDS YP_002895718.1 237811267 7887033 963092..963445 1 NC_012695.1 porin, Gram-negative type 963445 7887033 GBP346_A0994 Burkholderia pseudomallei MSHR346 porin, Gram-negative type YP_002895718.1 963092 D 536230 CDS YP_002895719.1 237811268 7890480 963674..963838 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; type I restriction-modification system, R subunit 963838 7890480 GBP346_A0995 Burkholderia pseudomallei MSHR346 type I restriction-modification system, R subunit YP_002895719.1 963674 D 536230 CDS YP_002895720.1 237811269 7890597 963891..964331 1 NC_012695.1 identified by match to protein family HMM PF00005; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 964331 7890597 GBP346_A0996 Burkholderia pseudomallei MSHR346 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_002895720.1 963891 D 536230 CDS YP_002895721.1 237811270 7890017 964370..965221 1 NC_012695.1 N-acetylanthranilate amidase 965221 7890017 GBP346_A0997 Burkholderia pseudomallei MSHR346 N-acetylanthranilate amidase YP_002895721.1 964370 D 536230 CDS YP_002895722.1 237811271 7887242 complement(966208..966384) 1 NC_012695.1 hypothetical protein 966384 7887242 GBP346_A0998 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895722.1 966208 R 536230 CDS YP_002895723.1 237811272 7886955 complement(966543..967484) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator CysB-like protein 967484 7886955 GBP346_A0999 Burkholderia pseudomallei MSHR346 transcriptional regulator CysB-like protein YP_002895723.1 966543 R 536230 CDS YP_002895724.1 237811273 7888001 967704..969383 1 NC_012695.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite reductase, ferredoxin subunit 969383 7888001 GBP346_A1000 Burkholderia pseudomallei MSHR346 sulfite reductase, ferredoxin subunit YP_002895724.1 967704 D 536230 CDS YP_002895725.1 237811274 7886716 969408..969950 1 NC_012695.1 identified by match to protein family HMM PF06073; hypothetical protein 969950 7886716 GBP346_A1001 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895725.1 969408 D 536230 CDS YP_002895726.1 237811275 7887595 969947..970696 1 NC_012695.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 970696 7887595 GBP346_A1002 Burkholderia pseudomallei MSHR346 phosphoadenosine phosphosulfate reductase YP_002895726.1 969947 D 536230 CDS YP_002895727.1 237811276 7889037 970777..971742 1 NC_012695.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 971742 7889037 GBP346_A1003 Burkholderia pseudomallei MSHR346 sulfate adenylyltransferase subunit 2 YP_002895727.1 970777 D 536230 CDS YP_002895728.1 237811277 7890853 971765..973081 1 NC_012695.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR02034; sulfate adenylyltransferase subunit 1 973081 7890853 GBP346_A1004 Burkholderia pseudomallei MSHR346 sulfate adenylyltransferase subunit 1 YP_002895728.1 971765 D 536230 CDS YP_002895729.1 237811278 7889438 973135..973914 1 NC_012695.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 973914 cobA_1 7889438 cobA_1 Burkholderia pseudomallei MSHR346 uroporphyrin-III C-methyltransferase YP_002895729.1 973135 D 536230 CDS YP_002895730.1 237811279 7889359 complement(974125..974511) 1 NC_012695.1 identified by match to protein family HMM PF01903; sirohydrochlorin cobaltochelatase 974511 cbiX 7889359 cbiX Burkholderia pseudomallei MSHR346 sirohydrochlorin cobaltochelatase YP_002895730.1 974125 R 536230 CDS YP_002895731.1 237811280 7888886 complement(974543..975694) 1 NC_012695.1 identified by match to protein family HMM PF03739; permease YjgP/YjgQ family protein 975694 7888886 GBP346_A1007 Burkholderia pseudomallei MSHR346 permease YjgP/YjgQ family protein YP_002895731.1 974543 R 536230 CDS YP_002895732.1 237811281 7887107 complement(975698..976795) 1 NC_012695.1 identified by match to protein family HMM PF03739; permease YjgP/YjgQ family protein 976795 7887107 GBP346_A1008 Burkholderia pseudomallei MSHR346 permease YjgP/YjgQ family protein YP_002895732.1 975698 R 536230 CDS YP_002895733.1 237811282 7889339 976916..978427 1 NC_012695.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 978427 7889339 GBP346_A1009 Burkholderia pseudomallei MSHR346 leucyl aminopeptidase YP_002895733.1 976916 D 536230 CDS YP_002895734.1 237811283 7887597 978471..978887 1 NC_012695.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 978887 7887597 GBP346_A1010 Burkholderia pseudomallei MSHR346 DNA polymerase III subunit chi YP_002895734.1 978471 D 536230 CDS YP_002895735.1 237811284 7887104 978909..979619 1 NC_012695.1 hypothetical protein 979619 7887104 GBP346_A1011 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895735.1 978909 D 536230 CDS YP_002895736.1 237811285 7890076 complement(979777..980100) 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 980100 7890076 GBP346_A1012 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002895736.1 979777 R 536230 CDS YP_002895737.1 237811286 7888000 complement(980144..980266) 1 NC_012695.1 ISBma2, transposase 980266 7888000 GBP346_A1013 Burkholderia pseudomallei MSHR346 ISBma2, transposase YP_002895737.1 980144 R 536230 CDS YP_002895738.1 237811287 7887890 complement(980314..981987) 1 NC_012695.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 981987 ilvD 7887890 ilvD Burkholderia pseudomallei MSHR346 dihydroxy-acid dehydratase YP_002895738.1 980314 R 536230 CDS YP_002895739.1 237811288 7888086 982123..983160 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; HTH-type transcriptional regulator IlvR 983160 7888086 GBP346_A1015 Burkholderia pseudomallei MSHR346 HTH-type transcriptional regulator IlvR YP_002895739.1 982123 D 536230 CDS YP_002895740.1 237811289 7886736 983157..983270 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 983270 7886736 GBP346_A1016 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895740.1 983157 D 536230 CDS YP_002895741.1 237811290 7890624 983267..984157 1 NC_012695.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 984157 lgt 7890624 lgt Burkholderia pseudomallei MSHR346 prolipoprotein diacylglyceryl transferase YP_002895741.1 983267 D 536230 CDS YP_002895742.1 237811291 7888311 complement(984496..985233) 1 NC_012695.1 identified by match to protein family HMM PF04402; protein 3SC2 985233 7888311 GBP346_A1018 Burkholderia pseudomallei MSHR346 protein 3SC2 YP_002895742.1 984496 R 536230 CDS YP_002895743.1 237811292 7887958 985274..985417 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 985417 7887958 GBP346_A1019 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895743.1 985274 D 536230 CDS YP_002895744.1 237811293 7887015 complement(985432..985893) 1 NC_012695.1 identified by match to protein family HMM PF01878; hypothetical protein 985893 7887015 GBP346_A1020 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895744.1 985432 R 536230 CDS YP_002895745.1 237811294 7887081 complement(986233..986547) 1 NC_012695.1 identified by match to protein family HMM PF05164; cell division protein ZapA 986547 7887081 GBP346_A1022 Burkholderia pseudomallei MSHR346 cell division protein ZapA YP_002895745.1 986233 R 536230 CDS YP_002895746.1 237811295 7887723 complement(986544..986894) 1 NC_012695.1 hypothetical protein 986894 7887723 GBP346_A1023 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895746.1 986544 R 536230 CDS YP_002895747.1 237811296 7887952 987433..989490 1 NC_012695.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for transport of vitamin B 989490 7887952 GBP346_A1026 Burkholderia pseudomallei MSHR346 outer membrane receptor for transport of vitamin B YP_002895747.1 987433 D 536230 CDS YP_002895748.1 237811297 7889671 complement(989460..989582) 1 NC_012695.1 hypothetical protein 989582 7889671 GBP346_A1025 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895748.1 989460 R 536230 CDS YP_002895749.1 237811298 7890551 989581..990582 1 NC_012695.1 identified by match to protein family HMM PF01032; cobalamin ABC transporter, permease protein 990582 7890551 GBP346_A1027 Burkholderia pseudomallei MSHR346 cobalamin ABC transporter, permease protein YP_002895749.1 989581 D 536230 CDS YP_002895750.1 237811299 7887357 990579..991409 1 NC_012695.1 identified by match to protein family HMM PF00005; cobalamin ABC transporter, ATP-binding protein 991409 7887357 GBP346_A1028 Burkholderia pseudomallei MSHR346 cobalamin ABC transporter, ATP-binding protein YP_002895750.1 990579 D 536230 CDS YP_002895751.1 237811300 7887260 991453..992511 1 NC_012695.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 992511 cobT 7887260 cobT Burkholderia pseudomallei MSHR346 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_002895751.1 991453 D 536230 CDS YP_002895752.1 237811301 7890953 992518..993276 1 NC_012695.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 993276 cobS 7890953 cobS Burkholderia pseudomallei MSHR346 cobalamin synthase YP_002895752.1 992518 D 536230 CDS YP_002895753.1 237811302 7889952 993261..993860 1 NC_012695.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; alpha-ribazole phosphatase 993860 cobC 7889952 cobC Burkholderia pseudomallei MSHR346 alpha-ribazole phosphatase YP_002895753.1 993261 D 536230 CDS YP_002895754.1 237811303 7890477 993907..994029 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 994029 7890477 GBP346_A1033 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895754.1 993907 D 536230 CDS YP_002895755.1 237811304 7890674 complement(994005..994841) 1 NC_012695.1 hypothetical protein 994841 7890674 GBP346_A1032 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895755.1 994005 R 536230 CDS YP_002895756.1 237811305 7889084 complement(995007..995939) 1 NC_012695.1 identified by match to protein family HMM PF01497; cobalamin ABC transporter, periplasmic cobalamin-binding protein 995939 btuF 7889084 btuF Burkholderia pseudomallei MSHR346 cobalamin ABC transporter, periplasmic cobalamin-binding protein YP_002895756.1 995007 R 536230 CDS YP_002895757.1 237811306 7888204 complement(995945..996997) 1 NC_012695.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; putative threonine-phosphate decarboxylase 996997 7888204 GBP346_A1035 Burkholderia pseudomallei MSHR346 putative threonine-phosphate decarboxylase YP_002895757.1 995945 R 536230 CDS YP_002895758.1 237811307 7889257 complement(996990..997934) 1 NC_012695.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 997934 cobD 7889257 cobD Burkholderia pseudomallei MSHR346 cobalamin biosynthesis protein YP_002895758.1 996990 R 536230 CDS YP_002895759.1 237811308 7887173 complement(997928..998554) 1 NC_012695.1 identified by match to protein family HMM PF02283; bifunctional adenosylcobalamin biosynthesis protein CobP 998554 7887173 GBP346_A1037 Burkholderia pseudomallei MSHR346 bifunctional adenosylcobalamin biosynthesis protein CobP YP_002895759.1 997928 R 536230 CDS YP_002895760.1 237811309 7890903 998513..1000144 1 NC_012695.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1000144 cobQ 7890903 cobQ Burkholderia pseudomallei MSHR346 cobyric acid synthase YP_002895760.1 998513 D 536230 CDS YP_002895761.1 237811310 7886693 1000425..1000841 1 NC_012695.1 identified by match to protein family HMM PF07681; DoxX family protein 1000841 7886693 GBP346_A1039 Burkholderia pseudomallei MSHR346 DoxX family protein YP_002895761.1 1000425 D 536230 CDS YP_002895762.1 237811311 7889665 1001200..1001823 1 NC_012695.1 identified by match to protein family HMM PF01656; ParA family protein 1001823 7889665 GBP346_A1040 Burkholderia pseudomallei MSHR346 ParA family protein YP_002895762.1 1001200 D 536230 CDS YP_002895763.1 237811312 7887813 complement(1001943..1002329) 1 NC_012695.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1002329 panD 7887813 panD Burkholderia pseudomallei MSHR346 aspartate alpha-decarboxylase YP_002895763.1 1001943 R 536230 CDS YP_002895764.1 237811313 7888959 complement(1002382..1003221) 1 NC_012695.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1003221 panC 7888959 panC Burkholderia pseudomallei MSHR346 pantoate--beta-alanine ligase YP_002895764.1 1002382 R 536230 CDS YP_002895765.1 237811314 7889386 complement(1003623..1003736) 1 NC_012695.1 hypothetical protein 1003736 7889386 GBP346_A1043 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895765.1 1003623 R 536230 CDS YP_002895766.1 237811315 7886868 complement(1003929..1004804) 1 NC_012695.1 identified by match to protein family HMM PF02616; ScpA/B protein 1004804 7886868 GBP346_A1044 Burkholderia pseudomallei MSHR346 ScpA/B protein YP_002895766.1 1003929 R 536230 CDS YP_002895767.1 237811316 7886950 complement(1004809..1004997) 1 NC_012695.1 hypothetical protein 1004997 7886950 GBP346_A1045 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895767.1 1004809 R 536230 CDS YP_002895768.1 237811317 7888741 1005204..1007021 1 NC_012695.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein, OMP85 family 1007021 7888741 GBP346_A1046 Burkholderia pseudomallei MSHR346 outer membrane protein, OMP85 family YP_002895768.1 1005204 D 536230 CDS YP_002895769.1 237811318 7890617 1007035..1011153 1 NC_012695.1 identified by match to protein family HMM PF04357; gramicidin S biosynthesis GrsT protein 1011153 7890617 GBP346_A1047 Burkholderia pseudomallei MSHR346 gramicidin S biosynthesis GrsT protein YP_002895769.1 1007035 D 536230 CDS YP_002895770.1 237811319 7888769 1011449..1012213 1 NC_012695.1 hypothetical protein 1012213 7888769 GBP346_A1048 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895770.1 1011449 D 536230 CDS YP_002895771.1 237811320 7887709 1012210..1013223 1 NC_012695.1 identified by match to protein family HMM PF00891; O-methyltransferase family protein 1013223 7887709 GBP346_A1050 Burkholderia pseudomallei MSHR346 O-methyltransferase family protein YP_002895771.1 1012210 D 536230 CDS YP_002895772.1 237811321 7888235 complement(1013195..1013332) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1013332 7888235 GBP346_A1049 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895772.1 1013195 R 536230 CDS YP_002895773.1 237811322 7889745 complement(1013579..1015756) 1 NC_012695.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1015756 metG 7889745 metG Burkholderia pseudomallei MSHR346 methionyl-tRNA synthetase YP_002895773.1 1013579 R 536230 CDS YP_002895774.1 237811323 7888089 complement(1016238..1016885) 1 NC_012695.1 identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein 1016885 7888089 GBP346_A1052 Burkholderia pseudomallei MSHR346 OmpA family protein YP_002895774.1 1016238 R 536230 CDS YP_002895775.1 237811324 7887202 1017264..1018352 1 NC_012695.1 identified by match to protein family HMM PF01656; match to protein family HMM PF01883; ParA family protein 1018352 7887202 GBP346_A1053 Burkholderia pseudomallei MSHR346 ParA family protein YP_002895775.1 1017264 D 536230 CDS YP_002895776.1 237811325 7890825 1018485..1019024 1 NC_012695.1 identified by match to protein family HMM PF00080; copper/zinc superoxide dismutase 1019024 sodC 7890825 sodC Burkholderia pseudomallei MSHR346 copper/zinc superoxide dismutase YP_002895776.1 1018485 D 536230 CDS YP_002895777.1 237811326 7890538 1019128..1019697 1 NC_012695.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1019697 dcd 7890538 dcd Burkholderia pseudomallei MSHR346 deoxycytidine triphosphate deaminase YP_002895777.1 1019128 D 536230 CDS YP_002895778.1 237811327 7889357 1019800..1022079 1 NC_012695.1 identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711; biodegradative arginine decarboxylase (ADC) 1022079 7889357 GBP346_A1056 Burkholderia pseudomallei MSHR346 biodegradative arginine decarboxylase (ADC) YP_002895778.1 1019800 D 536230 CDS YP_002895779.1 237811328 7889453 1022082..1022801 1 NC_012695.1 hypothetical protein 1022801 7889453 GBP346_A1057 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895779.1 1022082 D 536230 CDS YP_002895780.1 237811329 7887740 complement(1022935..1023609) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase 1023609 7887740 GBP346_A1058 Burkholderia pseudomallei MSHR346 HAD-superfamily hydrolase YP_002895780.1 1022935 R 536230 CDS YP_002895781.1 237811330 7889947 complement(1023642..1025051) 1 NC_012695.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1025051 argH_1 7889947 argH_1 Burkholderia pseudomallei MSHR346 argininosuccinate lyase YP_002895781.1 1023642 R 536230 CDS YP_002895782.1 237811331 7889639 complement(1025220..1027520) 1 NC_012695.1 identified by match to protein family HMM PF00577; fimbrial usher protein 1027520 7889639 GBP346_A1060 Burkholderia pseudomallei MSHR346 fimbrial usher protein YP_002895782.1 1025220 R 536230 CDS YP_002895783.1 237811332 7886695 complement(1028302..1029012) 1 NC_012695.1 P pilus assembly protein, chaperone PapD 1029012 7886695 GBP346_A1061 Burkholderia pseudomallei MSHR346 P pilus assembly protein, chaperone PapD YP_002895783.1 1028302 R 536230 CDS YP_002895784.1 237811333 7887253 complement(1029020..1029538) 1 NC_012695.1 identified by match to protein family HMM PF05229; spore coat protein 1029538 7887253 GBP346_A1062 Burkholderia pseudomallei MSHR346 spore coat protein YP_002895784.1 1029020 R 536230 CDS YP_002895785.1 237811334 7888194 1029885..1030922 1 NC_012695.1 identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1030922 7888194 GBP346_A1064 Burkholderia pseudomallei MSHR346 Spore Coat Protein U domain protein YP_002895785.1 1029885 D 536230 CDS YP_002895786.1 237811335 7888949 complement(1030886..1031098) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1031098 7888949 GBP346_A1063 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895786.1 1030886 R 536230 CDS YP_002895787.1 237811336 7890295 complement(1031095..1031910) 1 NC_012695.1 hypothetical protein 1031910 7890295 GBP346_A1065 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895787.1 1031095 R 536230 CDS YP_002895788.1 237811337 7886942 1032093..1032848 1 NC_012695.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; methlytransferase, UbiE/COQ5 family 1032848 7886942 GBP346_A1066 Burkholderia pseudomallei MSHR346 methlytransferase, UbiE/COQ5 family YP_002895788.1 1032093 D 536230 CDS YP_002895789.1 237811338 7887118 complement(1033301..1036375) 1 NC_012695.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 1036375 ppc 7887118 ppc Burkholderia pseudomallei MSHR346 phosphoenolpyruvate carboxylase YP_002895789.1 1033301 R 536230 CDS YP_002895790.1 237811339 7887822 1036398..1036577 1 NC_012695.1 hydroxymethylbilane synthase 1036577 7887822 GBP346_A1068 Burkholderia pseudomallei MSHR346 hydroxymethylbilane synthase YP_002895790.1 1036398 D 536230 CDS YP_002895791.1 237811340 7889530 1036612..1037601 1 NC_012695.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1037601 hemC 7889530 hemC Burkholderia pseudomallei MSHR346 porphobilinogen deaminase YP_002895791.1 1036612 D 536230 CDS YP_002895792.1 237811341 7889591 1037601..1039580 1 NC_012695.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 1039580 7889591 GBP346_A1070 Burkholderia pseudomallei MSHR346 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase YP_002895792.1 1037601 D 536230 CDS YP_002895793.1 237811342 7890881 1039585..1040775 1 NC_012695.1 identified by match to protein family HMM PF07219; match to protein family HMM PF07719; match to protein family HMM PF07721; HemY protein, N-terminus family 1040775 7890881 GBP346_A1072 Burkholderia pseudomallei MSHR346 HemY protein, N-terminus family YP_002895793.1 1039585 D 536230 CDS YP_002895794.1 237811343 7887341 complement(1040762..1040911) 1 NC_012695.1 hypothetical protein 1040911 7887341 GBP346_A1071 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895794.1 1040762 R 536230 CDS YP_002895795.1 237811344 7889244 complement(1040944..1042251) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 1042251 7889244 GBP346_A1073 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002895795.1 1040944 R 536230 CDS YP_002895796.1 237811345 7890509 complement(1042290..1043048) 1 NC_012695.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 1043048 fabG 7890509 fabG Burkholderia pseudomallei MSHR346 3-ketoacyl-(acyl-carrier-protein) reductase YP_002895796.1 1042290 R 536230 CDS YP_002895797.1 237811346 7889054 complement(1043135..1044574) 1 NC_012695.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2b4, (aldh2a) 1044574 7889054 GBP346_A1075 Burkholderia pseudomallei MSHR346 aldehyde dehydrogenase 2b4, (aldh2a) YP_002895797.1 1043135 R 536230 CDS YP_002895798.1 237811347 7890234 1044735..1045262 1 NC_012695.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1045262 ppa 7890234 ppa Burkholderia pseudomallei MSHR346 inorganic pyrophosphatase YP_002895798.1 1044735 D 536230 CDS YP_002895799.1 237811348 7889865 complement(1045321..1046220) 1 NC_012695.1 identified by match to protein family HMM PF01541; endo/excinuclease domain protein 1046220 7889865 GBP346_A1077 Burkholderia pseudomallei MSHR346 endo/excinuclease domain protein YP_002895799.1 1045321 R 536230 CDS YP_002895800.1 237811349 7890699 1046219..1046332 1 NC_012695.1 hypothetical protein 1046332 7890699 GBP346_A1078 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895800.1 1046219 D 536230 CDS YP_002895801.1 237811350 7889578 1046403..1047068 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; beta-D-glucosidase 1047068 7889578 GBP346_A1079 Burkholderia pseudomallei MSHR346 beta-D-glucosidase YP_002895801.1 1046403 D 536230 CDS YP_002895802.1 237811351 7889842 complement(1047256..1048581) 1 NC_012695.1 identified by match to protein family HMM PF04339; hypothetical protein 1048581 7889842 GBP346_A1080 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895802.1 1047256 R 536230 CDS YP_002895803.1 237811352 7887778 1048555..1050255 1 NC_012695.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1050255 nadE_1 7887778 nadE_1 Burkholderia pseudomallei MSHR346 NAD synthetase YP_002895803.1 1048555 D 536230 CDS YP_002895804.1 237811353 7889504 1050316..1050654 1 NC_012695.1 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 1050654 7889504 GBP346_A1082 Burkholderia pseudomallei MSHR346 nitrogen regulatory protein P-II YP_002895804.1 1050316 D 536230 CDS YP_002895805.1 237811354 7887628 complement(1051113..1052204) 1 NC_012695.1 putative outer membrane porin 1052204 7887628 GBP346_A1083 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002895805.1 1051113 R 536230 CDS YP_002895806.1 237811355 7887941 1052924..1053103 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1053103 7887941 GBP346_A1085 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895806.1 1052924 D 536230 CDS YP_002895807.1 237811356 7888676 complement(1053096..1053863) 1 NC_012695.1 identified by match to protein family HMM PF00005; arginine/ornithine transport ATP-binding protein AotP 1053863 7888676 GBP346_A1084 Burkholderia pseudomallei MSHR346 arginine/ornithine transport ATP-binding protein AotP YP_002895807.1 1053096 R 536230 CDS YP_002895808.1 237811357 7887308 complement(1053898..1054611) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine ABC transporter, permease protein 1054611 7887308 GBP346_A1086 Burkholderia pseudomallei MSHR346 histidine ABC transporter, permease protein YP_002895808.1 1053898 R 536230 CDS YP_002895809.1 237811358 7890092 complement(1054608..1055297) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine transport system permease protein HisQ 1055297 7890092 GBP346_A1087 Burkholderia pseudomallei MSHR346 histidine transport system permease protein HisQ YP_002895809.1 1054608 R 536230 CDS YP_002895810.1 237811359 7890557 complement(1055508..1056482) 1 NC_012695.1 identified by match to protein family HMM PF00497; match to protein family HMM TIGR01096; histidine ABC transporter, periplasmic histidine-binding protein 1056482 7890557 GBP346_A1088 Burkholderia pseudomallei MSHR346 histidine ABC transporter, periplasmic histidine-binding protein YP_002895810.1 1055508 R 536230 CDS YP_002895811.1 237811360 7888185 complement(1056443..1056604) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; amino acid ABC transporter, periplasmic amino acid-binding protein 1056604 7888185 GBP346_A1089 Burkholderia pseudomallei MSHR346 amino acid ABC transporter, periplasmic amino acid-binding protein YP_002895811.1 1056443 R 536230 CDS YP_002895812.1 237811361 7889246 1056665..1057375 1 NC_012695.1 identified by match to protein family HMM PF02678; cupin domain protein 1057375 7889246 GBP346_A1090 Burkholderia pseudomallei MSHR346 cupin domain protein YP_002895812.1 1056665 D 536230 CDS YP_002895813.1 237811362 7890253 complement(1057722..1058267) 1 NC_012695.1 hypothetical protein 1058267 7890253 GBP346_A1091 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895813.1 1057722 R 536230 CDS YP_002895814.1 237811363 7890735 1058283..1058441 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1058441 7890735 GBP346_A1092 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895814.1 1058283 D 536230 CDS YP_002895815.1 237811364 7890034 1058509..1059234 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator OmpR 1059234 ompR 7890034 ompR Burkholderia pseudomallei MSHR346 DNA-binding response regulator OmpR YP_002895815.1 1058509 D 536230 CDS YP_002895816.1 237811365 7890108 1059218..1060531 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; signal transduction histidine kinase 1060531 7890108 GBP346_A1094 Burkholderia pseudomallei MSHR346 signal transduction histidine kinase YP_002895816.1 1059218 D 536230 CDS YP_002895817.1 237811366 7890479 complement(1060568..1060834) 1 NC_012695.1 hypothetical protein 1060834 7890479 GBP346_A1095 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895817.1 1060568 R 536230 CDS YP_002895818.1 237811367 7890621 complement(1060961..1061098) 1 NC_012695.1 hypothetical protein 1061098 7890621 GBP346_A1096 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895818.1 1060961 R 536230 CDS YP_002895819.1 237811368 7888739 1061331..1063088 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 1063088 7888739 GBP346_A1097 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002895819.1 1061331 D 536230 CDS YP_002895820.1 237811369 7889949 1063142..1064482 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1064482 7889949 GBP346_A1098 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002895820.1 1063142 D 536230 CDS YP_002895821.1 237811370 7888876 complement(1064634..1064798) 1 NC_012695.1 hypothetical protein 1064798 7888876 GBP346_A1099 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895821.1 1064634 R 536230 CDS YP_002895822.1 237811371 7887975 complement(1064855..1065361) 1 NC_012695.1 putative lipoprotein 1065361 7887975 GBP346_A1100 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895822.1 1064855 R 536230 CDS YP_002895823.1 237811372 7887154 complement(1065358..1065909) 1 NC_012695.1 putative lipoprotein 1065909 7887154 GBP346_A1101 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895823.1 1065358 R 536230 CDS YP_002895824.1 237811373 7888125 complement(1066273..1066422) 1 NC_012695.1 hypothetical protein 1066422 7888125 GBP346_A1102 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895824.1 1066273 R 536230 CDS YP_002895825.1 237811374 7890054 1066528..1067946 1 NC_012695.1 identified by match to protein family HMM PF00982; match to protein family HMM TIGR02400; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 1067946 otsA_1 7890054 otsA_1 Burkholderia pseudomallei MSHR346 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_002895825.1 1066528 D 536230 CDS YP_002895826.1 237811375 7887921 1067939..1068541 1 NC_012695.1 hypothetical protein 1068541 7887921 GBP346_A1104 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895826.1 1067939 D 536230 CDS YP_002895827.1 237811376 7889003 complement(1068714..1069325) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1069325 7889003 GBP346_A1105 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895827.1 1068714 R 536230 CDS YP_002895828.1 237811377 7888684 complement(1070095..1071468) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 1071468 7888684 GBP346_A1106 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002895828.1 1070095 R 536230 CDS YP_002895829.1 237811378 7887463 complement(1071592..1072104) 1 NC_012695.1 identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 1072104 7887463 GBP346_A1107 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895829.1 1071592 R 536230 CDS YP_002895830.1 237811379 7888295 complement(1072678..1073058) 1 NC_012695.1 hypothetical protein 1073058 7888295 GBP346_A1108 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895830.1 1072678 R 536230 CDS YP_002895831.1 237811380 7890762 1073216..1073470 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1073470 7890762 GBP346_A1109 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895831.1 1073216 D 536230 CDS YP_002895832.1 237811381 7888259 1073470..1073601 1 NC_012695.1 hypothetical protein 1073601 7888259 GBP346_A1110 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895832.1 1073470 D 536230 CDS YP_002895833.1 237811382 7889791 1073859..1073993 1 NC_012695.1 hypothetical protein 1073993 7889791 GBP346_A1112 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895833.1 1073859 D 536230 CDS YP_002895834.1 237811383 7887142 complement(1073963..1074106) 1 NC_012695.1 hypothetical protein 1074106 7887142 GBP346_A1111 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895834.1 1073963 R 536230 CDS YP_002895835.1 237811384 7888121 complement(1074075..1074455) 1 NC_012695.1 putative lipoprotein 1074455 7888121 GBP346_A1113 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895835.1 1074075 R 536230 CDS YP_002895836.1 237811385 7889939 1074628..1075167 1 NC_012695.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1075167 7889939 GBP346_A1114 Burkholderia pseudomallei MSHR346 ecotin YP_002895836.1 1074628 D 536230 CDS YP_002895837.1 237811386 7888033 complement(1075265..1076401) 1 NC_012695.1 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase family protein 1076401 7888033 GBP346_A1115 Burkholderia pseudomallei MSHR346 D-alanyl-D-alanine carboxypeptidase family protein YP_002895837.1 1075265 R 536230 CDS YP_002895838.1 237811387 7889792 complement(1076674..1076898) 1 NC_012695.1 hypothetical protein 1076898 7889792 GBP346_A1116 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895838.1 1076674 R 536230 CDS YP_002895839.1 237811388 7888242 complement(1076915..1077064) 1 NC_012695.1 hypothetical protein 1077064 7888242 GBP346_A1117 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895839.1 1076915 R 536230 CDS YP_002895840.1 237811389 7890672 1077354..1077830 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF08816; inhibitor of vertebrate lysozyme (Ivy) superfamily 1077830 7890672 GBP346_A1118 Burkholderia pseudomallei MSHR346 inhibitor of vertebrate lysozyme (Ivy) superfamily YP_002895840.1 1077354 D 536230 CDS YP_002895841.1 237811390 7886900 1077843..1077974 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1077974 7886900 GBP346_A1119 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895841.1 1077843 D 536230 CDS YP_002895842.1 237811391 7890002 complement(1079384..1079575) 1 NC_012695.1 hypothetical protein 1079575 7890002 GBP346_A1120 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895842.1 1079384 R 536230 CDS YP_002895843.1 237811392 7890427 1079444..1088824 1 NC_012695.1 identified by match to protein family HMM PF05594; match to protein family HMM PF05860; match to protein family HMM TIGR01731; match to protein family HMM TIGR01901; cell surface protein 1088824 7890427 GBP346_A1121 Burkholderia pseudomallei MSHR346 cell surface protein YP_002895843.1 1079444 D 536230 CDS YP_002895844.1 237811393 7890116 1088830..1089111 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1089111 7890116 GBP346_A1122 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895844.1 1088830 D 536230 CDS YP_002895845.1 237811394 7890213 1089213..1089392 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1089392 7890213 GBP346_A1123 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895845.1 1089213 D 536230 CDS YP_002895846.1 237811395 7887697 1089705..1091417 1 NC_012695.1 identified by match to protein family HMM PF03865; match to protein family HMM PF08479; hemolysin activation/secretion protein 1091417 7887697 GBP346_A1124 Burkholderia pseudomallei MSHR346 hemolysin activation/secretion protein YP_002895846.1 1089705 D 536230 CDS YP_002895847.1 237811396 7889261 1091435..1091659 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1091659 7889261 GBP346_A1125 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895847.1 1091435 D 536230 CDS YP_002895848.1 237811397 7890774 1091820..1092404 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; putative lipoprotein 1092404 7890774 GBP346_A1126 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895848.1 1091820 D 536230 CDS YP_002895849.1 237811398 7889728 1093356..1093505 1 NC_012695.1 hypothetical protein 1093505 7889728 GBP346_A1127 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895849.1 1093356 D 536230 CDS YP_002895850.1 237811399 7887294 complement(1093696..1094715) 1 NC_012695.1 identified by match to protein family HMM PF02371; transposase for insertion sequence element A 1094715 7887294 GBP346_A1128 Burkholderia pseudomallei MSHR346 transposase for insertion sequence element A YP_002895850.1 1093696 R 536230 CDS YP_002895851.1 237811400 7888904 1094728..1094928 1 NC_012695.1 transposase IS3/family protein 1094928 7888904 GBP346_A1129 Burkholderia pseudomallei MSHR346 transposase IS3/family protein YP_002895851.1 1094728 D 536230 CDS YP_002895852.1 237811401 7890416 1095030..1095221 1 NC_012695.1 integrase catalytic region 1095221 7890416 GBP346_A1130 Burkholderia pseudomallei MSHR346 integrase catalytic region YP_002895852.1 1095030 D 536230 CDS YP_002895853.1 237811402 7890837 1095251..1095445 1 NC_012695.1 hypothetical protein 1095445 7890837 GBP346_A1131 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895853.1 1095251 D 536230 CDS YP_002895854.1 237811403 7889751 complement(1095449..1095709) 1 NC_012695.1 hypothetical protein 1095709 7889751 GBP346_A1132 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895854.1 1095449 R 536230 CDS YP_002895855.1 237811404 7890377 complement(1095706..1095840) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1095840 7890377 GBP346_A1133 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895855.1 1095706 R 536230 CDS YP_002895856.1 237811405 7888441 complement(1096143..1096256) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1096256 7888441 GBP346_A1134 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895856.1 1096143 R 536230 CDS YP_002895857.1 237811406 7887586 1097103..1097531 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1097531 7887586 GBP346_A1135 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895857.1 1097103 D 536230 CDS YP_002895858.1 237811407 7888474 1097506..1097829 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1097829 7888474 GBP346_A1136 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895858.1 1097506 D 536230 CDS YP_002895859.1 237811408 7887459 complement(1098049..1098165) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1098165 7887459 GBP346_A1137 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895859.1 1098049 R 536230 CDS YP_002895860.1 237811409 7890516 complement(1098779..1099354) 1 NC_012695.1 identified by match to protein family HMM PF00239; match to protein family HMM PF02796; resolvase, N domain protein 1099354 7890516 GBP346_A1138 Burkholderia pseudomallei MSHR346 resolvase, N domain protein YP_002895860.1 1098779 R 536230 CDS YP_002895861.1 237811410 7888786 1099645..1100646 1 NC_012695.1 hypothetical protein 1100646 7888786 GBP346_A1139 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895861.1 1099645 D 536230 CDS YP_002895862.1 237811411 7890176 1100930..1101658 1 NC_012695.1 hypothetical protein 1101658 7890176 GBP346_A1140 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895862.1 1100930 D 536230 CDS YP_002895863.1 237811412 7889047 1101870..1102040 1 NC_012695.1 phage transcriptional regulator, AlpA 1102040 7889047 GBP346_A1141 Burkholderia pseudomallei MSHR346 phage transcriptional regulator, AlpA YP_002895863.1 1101870 D 536230 CDS YP_002895864.1 237811413 7887806 1102037..1102315 1 NC_012695.1 hypothetical protein 1102315 7887806 GBP346_A1142 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895864.1 1102037 D 536230 CDS YP_002895865.1 237811414 7889476 1102671..1102847 1 NC_012695.1 hypothetical protein 1102847 7889476 GBP346_A1143 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895865.1 1102671 D 536230 CDS YP_002895866.1 237811415 7887850 1102840..1103142 1 NC_012695.1 hypothetical protein 1103142 7887850 GBP346_A1144 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895866.1 1102840 D 536230 CDS YP_002895867.1 237811416 7886831 1103135..1103347 1 NC_012695.1 hypothetical protein 1103347 7886831 GBP346_A1145 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895867.1 1103135 D 536230 CDS YP_002895868.1 237811417 7886781 1103340..1103687 1 NC_012695.1 hypothetical protein 1103687 7886781 GBP346_A1146 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895868.1 1103340 D 536230 CDS YP_002895869.1 237811418 7890263 1103697..1104041 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1104041 7890263 GBP346_A1147 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895869.1 1103697 D 536230 CDS YP_002895870.1 237811419 7887572 1104117..1106978 1 NC_012695.1 identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family 1106978 7887572 GBP346_A1148 Burkholderia pseudomallei MSHR346 primase C 2 (PriCT-2) family YP_002895870.1 1104117 D 536230 CDS YP_002895871.1 237811420 7888005 1107006..1107119 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1107119 7888005 GBP346_A1149 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895871.1 1107006 D 536230 CDS YP_002895872.1 237811421 7889026 complement(1107683..1107811) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1107811 7889026 GBP346_A1150 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895872.1 1107683 R 536230 CDS YP_002895873.1 237811422 7890417 1108319..1108729 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1108729 7890417 GBP346_A1151 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895873.1 1108319 D 536230 CDS YP_002895874.1 237811423 7887576 complement(1108933..1110207) 1 NC_012695.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1110207 7887576 GBP346_A1152 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002895874.1 1108933 R 536230 CDS YP_002895875.1 237811424 7889206 complement(1110730..1111083) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; integrase, catalytic region 1111083 7889206 GBP346_A1154 Burkholderia pseudomallei MSHR346 integrase, catalytic region YP_002895875.1 1110730 R 536230 CDS YP_002895876.1 237811425 7889020 1111170..1111310 1 NC_012695.1 hypothetical protein 1111310 7889020 GBP346_A1155 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895876.1 1111170 D 536230 CDS YP_002895877.1 237811426 7887617 1111525..1111809 1 NC_012695.1 hypothetical protein 1111809 7887617 GBP346_A1156 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895877.1 1111525 D 536230 CDS YP_002895878.1 237811427 7887014 1111820..1112122 1 NC_012695.1 hypothetical protein 1112122 7887014 GBP346_A1157 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895878.1 1111820 D 536230 CDS YP_002895879.1 237811428 7888692 1112122..1112337 1 NC_012695.1 hypothetical protein 1112337 7888692 GBP346_A1158 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895879.1 1112122 D 536230 CDS YP_002895880.1 237811429 7890043 complement(1112367..1112627) 1 NC_012695.1 hypothetical protein 1112627 7890043 GBP346_A1159 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895880.1 1112367 R 536230 CDS YP_002895881.1 237811430 7886776 1112851..1113117 1 NC_012695.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1113117 infA_1 7886776 infA_1 Burkholderia pseudomallei MSHR346 translation initiation factor IF-1 YP_002895881.1 1112851 D 536230 CDS YP_002895882.1 237811431 7887276 complement(1113582..1114508) 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 1114508 7887276 GBP346_A1161 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002895882.1 1113582 R 536230 CDS YP_002895883.1 237811432 7890800 complement(1114529..1116100) 1 NC_012695.1 hypothetical protein 1116100 7890800 GBP346_A1162 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895883.1 1114529 R 536230 CDS YP_002895884.1 237811433 7889685 complement(1116561..1116800) 1 NC_012695.1 identified by match to protein family HMM PF00301; hypothetical protein 1116800 7889685 GBP346_A1163 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895884.1 1116561 R 536230 CDS YP_002895885.1 237811434 7887365 1117186..1117593 1 NC_012695.1 Rod shape-determining protein RodA 1117593 7887365 GBP346_A1164 Burkholderia pseudomallei MSHR346 Rod shape-determining protein RodA YP_002895885.1 1117186 D 536230 CDS YP_002895886.1 237811435 7890126 1117725..1119707 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein uup 1119707 7890126 GBP346_A1165 Burkholderia pseudomallei MSHR346 ABC transporter ATP-binding protein uup YP_002895886.1 1117725 D 536230 CDS YP_002895887.1 237811436 7890545 1119913..1121895 1 NC_012695.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1121895 parE 7890545 parE Burkholderia pseudomallei MSHR346 DNA topoisomerase IV subunit B YP_002895887.1 1119913 D 536230 CDS YP_002895888.1 237811437 7889112 1121954..1124272 1 NC_012695.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1124272 parC 7889112 parC Burkholderia pseudomallei MSHR346 DNA topoisomerase IV subunit A YP_002895888.1 1121954 D 536230 CDS YP_002895889.1 237811438 7886820 complement(1124545..1124820) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1124820 7886820 GBP346_A1168 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895889.1 1124545 R 536230 CDS YP_002895890.1 237811439 7886787 1124966..1125424 1 NC_012695.1 hypothetical protein 1125424 7886787 GBP346_A1169 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895890.1 1124966 D 536230 CDS YP_002895891.1 237811440 7890029 complement(1125570..1126454) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1126454 7890029 GBP346_A1170 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895891.1 1125570 R 536230 CDS YP_002895892.1 237811441 7890125 1126560..1127015 1 NC_012695.1 identified by match to protein family HMM PF05232; transmembrane pair domain protein 1127015 7890125 GBP346_A1171 Burkholderia pseudomallei MSHR346 transmembrane pair domain protein YP_002895892.1 1126560 D 536230 CDS YP_002895893.1 237811442 7889940 complement(1127239..1128201) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1128201 7889940 GBP346_A1172 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002895893.1 1127239 R 536230 CDS YP_002895894.1 237811443 7887516 complement(1128234..1128431) 1 NC_012695.1 putative 200 kDa antigen p200 1128431 7887516 GBP346_A1173 Burkholderia pseudomallei MSHR346 putative 200 kDa antigen p200 YP_002895894.1 1128234 R 536230 CDS YP_002895895.1 237811444 7890692 1128417..1129730 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter, major facilitator family 1129730 7890692 GBP346_A1174 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002895895.1 1128417 D 536230 CDS YP_002895896.1 237811445 7886837 1129732..1130994 1 NC_012695.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1130994 7886837 GBP346_A1175 Burkholderia pseudomallei MSHR346 allantoate amidohydrolase YP_002895896.1 1129732 D 536230 CDS YP_002895897.1 237811446 7890074 1131270..1132295 1 NC_012695.1 identified by match to protein family HMM PF00850; histone, deacetylase family 1132295 7890074 GBP346_A1176 Burkholderia pseudomallei MSHR346 histone, deacetylase family YP_002895897.1 1131270 D 536230 CDS YP_002895898.1 237811447 7888163 1132292..1132444 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; histone H1 protein 1132444 7888163 GBP346_A1177 Burkholderia pseudomallei MSHR346 histone H1 protein YP_002895898.1 1132292 D 536230 CDS YP_002895899.1 237811448 7887146 complement(1132610..1133818) 1 NC_012695.1 identified by match to protein family HMM PF02417; chromate transporter, chromate ion transporter 1133818 7887146 GBP346_A1178 Burkholderia pseudomallei MSHR346 chromate transporter, chromate ion transporter YP_002895899.1 1132610 R 536230 CDS YP_002895900.1 237811449 7890561 complement(1133950..1136268) 1 NC_012695.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase/phosphodiesterase 1136268 7890561 GBP346_A1179 Burkholderia pseudomallei MSHR346 diguanylate cyclase/phosphodiesterase YP_002895900.1 1133950 R 536230 CDS YP_002895901.1 237811450 7888515 complement(1136530..1137429) 1 NC_012695.1 identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; phenazine biosynthesis protein, PhzF family 1137429 7888515 GBP346_A1180 Burkholderia pseudomallei MSHR346 phenazine biosynthesis protein, PhzF family YP_002895901.1 1136530 R 536230 CDS YP_002895902.1 237811451 7888404 complement(1137434..1137892) 1 NC_012695.1 identified by match to protein family HMM PF01042; putative endoribonuclease L-PSP 1137892 7888404 GBP346_A1181 Burkholderia pseudomallei MSHR346 putative endoribonuclease L-PSP YP_002895902.1 1137434 R 536230 CDS YP_002895903.1 237811452 7890420 complement(1137957..1139138) 1 NC_012695.1 identified by match to protein family HMM PF00155; aminotransferase, class I and II 1139138 7890420 GBP346_A1182 Burkholderia pseudomallei MSHR346 aminotransferase, class I and II YP_002895903.1 1137957 R 536230 CDS YP_002895904.1 237811453 7888898 complement(1139199..1140107) 1 NC_012695.1 identified by match to protein family HMM PF00892; integral membrane protein, DUF6 1140107 7888898 GBP346_A1183 Burkholderia pseudomallei MSHR346 integral membrane protein, DUF6 YP_002895904.1 1139199 R 536230 CDS YP_002895905.1 237811454 7888035 complement(1140208..1140891) 1 NC_012695.1 hypothetical protein 1140891 7888035 GBP346_A1184 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895905.1 1140208 R 536230 CDS YP_002895906.1 237811455 7886800 1141042..1142496 1 NC_012695.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family 1142496 7886800 GBP346_A1185 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002895906.1 1141042 D 536230 CDS YP_002895907.1 237811456 7890257 1142632..1144530 1 NC_012695.1 molecular chaperone; heat shock protein 90 1144530 7890257 GBP346_A1186 Burkholderia pseudomallei MSHR346 heat shock protein 90 YP_002895907.1 1142632 D 536230 CDS YP_002895908.1 237811457 7889393 1144530..1145132 1 NC_012695.1 identified by match to protein family HMM PF04345; putative chorismate--pyruvate lyase 1145132 7889393 GBP346_A1187 Burkholderia pseudomallei MSHR346 putative chorismate--pyruvate lyase YP_002895908.1 1144530 D 536230 CDS YP_002895909.1 237811458 7887784 1145132..1145608 1 NC_012695.1 Mug G:T/U mismatch-specific DNA glycosylase 1145608 7887784 GBP346_A1188 Burkholderia pseudomallei MSHR346 Mug G:T/U mismatch-specific DNA glycosylase YP_002895909.1 1145132 D 536230 CDS YP_002895910.1 237811459 7890464 1145605..1145766 1 NC_012695.1 hypothetical protein 1145766 7890464 GBP346_A1189 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895910.1 1145605 D 536230 CDS YP_002895911.1 237811460 7888229 1145859..1146788 1 NC_012695.1 spermidine synthase 1146788 7888229 GBP346_A1190 Burkholderia pseudomallei MSHR346 spermidine synthase YP_002895911.1 1145859 D 536230 CDS YP_002895912.1 237811461 7887834 1146981..1147220 1 NC_012695.1 hypothetical protein 1147220 7887834 GBP346_A1191 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895912.1 1146981 D 536230 CDS YP_002895913.1 237811462 7886853 1147217..1148767 1 NC_012695.1 identified by match to protein family HMM PF00474; sodium:solute symporter family protein 1148767 7886853 GBP346_A1192 Burkholderia pseudomallei MSHR346 sodium:solute symporter family protein YP_002895913.1 1147217 D 536230 CDS YP_002895914.1 237811463 7890185 complement(1148895..1149329) 1 NC_012695.1 identified by match to protein family HMM PF00903; match to protein family HMM PF06983; VOC metalloenzyme family protein 1149329 7890185 GBP346_A1193 Burkholderia pseudomallei MSHR346 VOC metalloenzyme family protein YP_002895914.1 1148895 R 536230 CDS YP_002895915.1 237811464 7890862 complement(1149695..1150648) 1 NC_012695.1 identified by match to protein family HMM PF00923; match to protein family HMM TIGR00874; transaldolase B 1150648 tal 7890862 tal Burkholderia pseudomallei MSHR346 transaldolase B YP_002895915.1 1149695 R 536230 CDS YP_002895916.1 237811465 7887752 complement(1150759..1151010) 1 NC_012695.1 hypothetical protein 1151010 7887752 GBP346_A1195 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895916.1 1150759 R 536230 CDS YP_002895917.1 237811466 7888860 complement(1151050..1152267) 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM PF03594; match to protein family HMM TIGR00843; benzoate transporter 1152267 7888860 GBP346_A1196 Burkholderia pseudomallei MSHR346 benzoate transporter YP_002895917.1 1151050 R 536230 CDS YP_002895918.1 237811467 7887394 complement(1152351..1153526) 1 NC_012695.1 VWA containing CoxE family protein 1153526 7887394 GBP346_A1197 Burkholderia pseudomallei MSHR346 VWA containing CoxE family protein YP_002895918.1 1152351 R 536230 CDS YP_002895919.1 237811468 7890498 complement(1153739..1154581) 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF07728; ATPase, AAA family 1154581 7890498 GBP346_A1198 Burkholderia pseudomallei MSHR346 ATPase, AAA family YP_002895919.1 1153739 R 536230 CDS YP_002895920.1 237811469 7889889 1154815..1155174 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome C4 family protein 1155174 7889889 GBP346_A1199 Burkholderia pseudomallei MSHR346 cytochrome C4 family protein YP_002895920.1 1154815 D 536230 CDS YP_002895921.1 237811470 7888505 1155215..1155583 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome C4 1155583 7888505 GBP346_A1200 Burkholderia pseudomallei MSHR346 cytochrome C4 YP_002895921.1 1155215 D 536230 CDS YP_002895922.1 237811471 7888367 complement(1156061..1156612) 1 NC_012695.1 identified by match to protein family HMM PF08897; hypothetical protein 1156612 7888367 GBP346_A1201 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895922.1 1156061 R 536230 CDS YP_002895923.1 237811472 7889938 1157026..1158096 1 NC_012695.1 identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein 1158096 7889938 GBP346_A1202 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895923.1 1157026 D 536230 CDS YP_002895924.1 237811473 7889124 complement(1158229..1158873) 1 NC_012695.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 1158873 nth 7889124 nth Burkholderia pseudomallei MSHR346 endonuclease III YP_002895924.1 1158229 R 536230 CDS YP_002895925.1 237811474 7890581 complement(1158878..1159750) 1 NC_012695.1 Involved in the electron transport chain; ferredoxin 1159750 7890581 GBP346_A1204 Burkholderia pseudomallei MSHR346 ferredoxin YP_002895925.1 1158878 R 536230 CDS YP_002895926.1 237811475 7889579 1160008..1160640 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 1160640 7889579 GBP346_A1205 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002895926.1 1160008 D 536230 CDS YP_002895927.1 237811476 7889838 complement(1160783..1162249) 1 NC_012695.1 identified by match to protein family HMM PF06850; match to protein family HMM TIGR01849; intracellular PHB depolymerase 1162249 7889838 GBP346_A1206 Burkholderia pseudomallei MSHR346 intracellular PHB depolymerase YP_002895927.1 1160783 R 536230 CDS YP_002895928.1 237811477 7887995 1162187..1162312 1 NC_012695.1 hypothetical protein 1162312 7887995 GBP346_A1207 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895928.1 1162187 D 536230 CDS YP_002895929.1 237811478 7889950 complement(1162314..1162427) 1 NC_012695.1 hypothetical protein 1162427 7889950 GBP346_A1208 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895929.1 1162314 R 536230 CDS YP_002895930.1 237811479 7888852 complement(1162469..1164301) 1 NC_012695.1 identified by match to protein family HMM PF00723; glycosyl hydrolase, family 15 1164301 7888852 GBP346_A1209 Burkholderia pseudomallei MSHR346 glycosyl hydrolase, family 15 YP_002895930.1 1162469 R 536230 CDS YP_002895931.1 237811480 7889562 1164257..1164481 1 NC_012695.1 hypothetical protein 1164481 7889562 GBP346_A1210 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895931.1 1164257 D 536230 CDS YP_002895932.1 237811481 7890052 1164478..1165713 1 NC_012695.1 6-phosphogluconolactonase 1165713 7890052 GBP346_A1211 Burkholderia pseudomallei MSHR346 6-phosphogluconolactonase YP_002895932.1 1164478 D 536230 CDS YP_002895933.1 237811482 7890645 complement(1165980..1171571) 1 NC_012695.1 identified by match to protein family HMM PF01580; match to protein family HMM PF09397; cell divisionftsk/spoiiie 1171571 7890645 GBP346_A1212 Burkholderia pseudomallei MSHR346 cell divisionftsk/spoiiie YP_002895933.1 1165980 R 536230 CDS YP_002895934.1 237811483 7888984 complement(1171743..1172291) 1 NC_012695.1 identified by match to protein family HMM PF03724; hypothetical protein 1172291 7888984 GBP346_A1213 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895934.1 1171743 R 536230 CDS YP_002895935.1 237811484 7890086 1172394..1172732 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1172732 7890086 GBP346_A1214 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895935.1 1172394 D 536230 CDS YP_002895936.1 237811485 7889071 1173024..1174238 1 NC_012695.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1174238 purT 7889071 purT Burkholderia pseudomallei MSHR346 phosphoribosylglycinamide formyltransferase 2 YP_002895936.1 1173024 D 536230 CDS YP_002895937.1 237811486 7888653 1174408..1174572 1 NC_012695.1 putative lipoprotein 1174572 7888653 GBP346_A1216 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002895937.1 1174408 D 536230 CDS YP_002895938.1 237811487 7890493 1174631..1175017 1 NC_012695.1 periplasmic protein 1175017 7890493 GBP346_A1217 Burkholderia pseudomallei MSHR346 periplasmic protein YP_002895938.1 1174631 D 536230 CDS YP_002895939.1 237811488 7889668 1175037..1175231 1 NC_012695.1 hypothetical protein 1175231 7889668 GBP346_A1218 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895939.1 1175037 D 536230 CDS YP_002895940.1 237811489 7886898 1175315..1175632 1 NC_012695.1 ATP-dependent RNA helicase RhlE 1175632 7886898 GBP346_A1219 Burkholderia pseudomallei MSHR346 ATP-dependent RNA helicase RhlE YP_002895940.1 1175315 D 536230 CDS YP_002895941.1 237811490 7890207 1175646..1177091 1 NC_012695.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; dead/deah box helicase 1177091 7890207 GBP346_A1220 Burkholderia pseudomallei MSHR346 dead/deah box helicase YP_002895941.1 1175646 D 536230 CDS YP_002895942.1 237811491 7888262 complement(1177416..1177541) 1 NC_012695.1 hypothetical protein 1177541 7888262 GBP346_A1221 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895942.1 1177416 R 536230 CDS YP_002895943.1 237811492 7890695 complement(1177565..1178458) 1 NC_012695.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 1178458 7890695 GBP346_A1222 Burkholderia pseudomallei MSHR346 glutamyl-Q tRNA(Asp) synthetase YP_002895943.1 1177565 R 536230 CDS YP_002895944.1 237811493 7889830 complement(1178502..1179401) 1 NC_012695.1 identified by match to protein family HMM PF00581; rhodanese superfamily protein 1179401 7889830 GBP346_A1223 Burkholderia pseudomallei MSHR346 rhodanese superfamily protein YP_002895944.1 1178502 R 536230 CDS YP_002895945.1 237811494 7888274 1179508..1179846 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, Fis family 1179846 7888274 GBP346_A1224 Burkholderia pseudomallei MSHR346 transcriptional regulator, Fis family YP_002895945.1 1179508 D 536230 CDS YP_002895946.1 237811495 7887355 1180023..1183547 1 NC_012695.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1183547 dnaE 7887355 dnaE Burkholderia pseudomallei MSHR346 DNA polymerase III subunit alpha YP_002895946.1 1180023 D 536230 CDS YP_002895947.1 237811496 7888796 1183587..1185377 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02203; lipid A export permease/ATP-binding protein MsbA 1185377 msbA 7888796 msbA Burkholderia pseudomallei MSHR346 lipid A export permease/ATP-binding protein MsbA YP_002895947.1 1183587 D 536230 CDS YP_002895948.1 237811497 7889969 1185431..1186513 1 NC_012695.1 identified by match to protein family HMM PF00534; lipooligosaccharide glycosyl transferase G 1186513 7889969 GBP346_A1227 Burkholderia pseudomallei MSHR346 lipooligosaccharide glycosyl transferase G YP_002895948.1 1185431 D 536230 CDS YP_002895949.1 237811498 7890544 1186861..1187940 1 NC_012695.1 identified by match to protein family HMM PF01075; heptosyltransferase 1187940 7890544 GBP346_A1228 Burkholderia pseudomallei MSHR346 heptosyltransferase YP_002895949.1 1186861 D 536230 CDS YP_002895950.1 237811499 7888624 1187937..1189241 1 NC_012695.1 hypothetical protein 1189241 7888624 GBP346_A1229 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895950.1 1187937 D 536230 CDS YP_002895951.1 237811500 7889988 1189238..1190500 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 1190500 7889988 GBP346_A1230 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002895951.1 1189238 D 536230 CDS YP_002895952.1 237811501 7888179 1190587..1191759 1 NC_012695.1 identified by match to protein family HMM PF01075; putative lipopolysaccharide heptosyltransferase III 1191759 7888179 GBP346_A1231 Burkholderia pseudomallei MSHR346 putative lipopolysaccharide heptosyltransferase III YP_002895952.1 1190587 D 536230 CDS YP_002895953.1 237811502 7886749 complement(1192026..1192790) 1 NC_012695.1 identified by match to protein family HMM PF00535; lipopolysaccharide core biosynthesis glycosyltransferase WaaE 1192790 7886749 GBP346_A1232 Burkholderia pseudomallei MSHR346 lipopolysaccharide core biosynthesis glycosyltransferase WaaE YP_002895953.1 1192026 R 536230 CDS YP_002895954.1 237811503 7886978 1193248..1193628 1 NC_012695.1 hypothetical protein 1193628 7886978 GBP346_A1233 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895954.1 1193248 D 536230 CDS YP_002895955.1 237811504 7887122 complement(1193907..1194500) 1 NC_012695.1 hypothetical protein 1194500 7887122 GBP346_A1234 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895955.1 1193907 R 536230 CDS YP_002895956.1 237811505 7890952 complement(1194804..1196057) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 1196057 7890952 GBP346_A1235 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002895956.1 1194804 R 536230 CDS YP_002895957.1 237811506 7889364 complement(1196054..1197034) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; PRC-barrel domain protein 1197034 7889364 GBP346_A1236 Burkholderia pseudomallei MSHR346 PRC-barrel domain protein YP_002895957.1 1196054 R 536230 CDS YP_002895958.1 237811507 7890114 complement(1197388..1197504) 1 NC_012695.1 hypothetical protein 1197504 7890114 GBP346_A1237 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895958.1 1197388 R 536230 CDS YP_002895959.1 237811508 7890044 complement(1197758..1198210) 1 NC_012695.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; carboxymuconolactone decarboxylase family protein 1198210 7890044 GBP346_A1238 Burkholderia pseudomallei MSHR346 carboxymuconolactone decarboxylase family protein YP_002895959.1 1197758 R 536230 CDS YP_002895960.1 237811509 7890124 complement(1198706..1199599) 1 NC_012695.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957; RNA polymerase sigma-70 factor, TIGR02947 family 1199599 7890124 GBP346_A1239 Burkholderia pseudomallei MSHR346 RNA polymerase sigma-70 factor, TIGR02947 family YP_002895960.1 1198706 R 536230 CDS YP_002895961.1 237811510 7886972 complement(1199777..1200211) 1 NC_012695.1 hypothetical protein 1200211 7886972 GBP346_A1240 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895961.1 1199777 R 536230 CDS YP_002895962.1 237811511 7888160 1200237..1200353 1 NC_012695.1 hypothetical protein 1200353 7888160 GBP346_A1242 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895962.1 1200237 D 536230 CDS YP_002895963.1 237811512 7886731 complement(1200347..1200640) 1 NC_012695.1 hypothetical protein 1200640 7886731 GBP346_A1241 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895963.1 1200347 R 536230 CDS YP_002895964.1 237811513 7887279 complement(1200963..1201376) 1 NC_012695.1 hypothetical protein 1201376 7887279 GBP346_A1243 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895964.1 1200963 R 536230 CDS YP_002895965.1 237811514 7890475 1201364..1201690 1 NC_012695.1 hypothetical protein 1201690 7890475 GBP346_A1244 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895965.1 1201364 D 536230 CDS YP_002895966.1 237811515 7889064 1201720..1202118 1 NC_012695.1 hypothetical protein 1202118 7889064 GBP346_A1245 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895966.1 1201720 D 536230 CDS YP_002895967.1 237811516 7886718 1202810..1203526 1 NC_012695.1 identified by match to protein family HMM TIGR03398; putative phospholipase C accessory protein 1203526 7886718 GBP346_A1246 Burkholderia pseudomallei MSHR346 putative phospholipase C accessory protein YP_002895967.1 1202810 D 536230 CDS YP_002895968.1 237811517 7888528 1203600..1204985 1 NC_012695.1 hypothetical protein 1204985 7888528 GBP346_A1247 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895968.1 1203600 D 536230 CDS YP_002895969.1 237811518 7887008 complement(1205013..1206401) 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease 1206401 7887008 GBP346_A1248 Burkholderia pseudomallei MSHR346 xanthine permease YP_002895969.1 1205013 R 536230 CDS YP_002895970.1 237811519 7889012 1206366..1206656 1 NC_012695.1 hypothetical protein 1206656 7889012 GBP346_A1249 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895970.1 1206366 D 536230 CDS YP_002895971.1 237811520 7888308 complement(1206719..1208185) 1 NC_012695.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family 1208185 7888308 GBP346_A1250 Burkholderia pseudomallei MSHR346 ribonuclease, Rne/Rng family YP_002895971.1 1206719 R 536230 CDS YP_002895972.1 237811521 7887378 complement(1208194..1208823) 1 NC_012695.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1208823 maf_1 7887378 maf_1 Burkholderia pseudomallei MSHR346 Maf-like protein YP_002895972.1 1208194 R 536230 CDS YP_002895973.1 237811522 7888170 complement(1208876..1209346) 1 NC_012695.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1209346 7888170 GBP346_A1252 Burkholderia pseudomallei MSHR346 rRNA large subunit methyltransferase YP_002895973.1 1208876 R 536230 CDS YP_002895974.1 237811523 7890025 complement(1209403..1209867) 1 NC_012695.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap domain protein 1209867 7890025 GBP346_A1253 Burkholderia pseudomallei MSHR346 iojap domain protein YP_002895974.1 1209403 R 536230 CDS YP_002895975.1 237811524 7890871 complement(1209872..1210624) 1 NC_012695.1 catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 1210624 nadD 7890871 nadD Burkholderia pseudomallei MSHR346 nicotinic acid mononucleotide adenylyltransferase YP_002895975.1 1209872 R 536230 CDS YP_002895976.1 237811525 7887992 complement(1210621..1211544) 1 NC_012695.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1211544 hemF 7887992 hemF Burkholderia pseudomallei MSHR346 coproporphyrinogen III oxidase YP_002895976.1 1210621 R 536230 CDS YP_002895977.1 237811526 7888936 complement(1211675..1212952) 1 NC_012695.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1212952 purD 7888936 purD Burkholderia pseudomallei MSHR346 phosphoribosylamine--glycine ligase YP_002895977.1 1211675 R 536230 CDS YP_002895978.1 237811527 7888323 complement(1213063..1213791) 1 NC_012695.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 1213791 7888323 GBP346_A1257 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895978.1 1213063 R 536230 CDS YP_002895979.1 237811528 7889573 complement(1213831..1214157) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1214157 7889573 GBP346_A1258 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895979.1 1213831 R 536230 CDS YP_002895980.1 237811529 7887879 complement(1214196..1214846) 1 NC_012695.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1214846 upp 7887879 upp Burkholderia pseudomallei MSHR346 uracil phosphoribosyltransferase YP_002895980.1 1214196 R 536230 CDS YP_002895981.1 237811530 7887591 1215104..1215883 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 1215883 7887591 GBP346_A1260 Burkholderia pseudomallei MSHR346 oxidoreductase, short chain dehydrogenase/reductase family YP_002895981.1 1215104 D 536230 CDS YP_002895982.1 237811531 7888446 1216122..1216514 1 NC_012695.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1216514 mgsA 7888446 mgsA Burkholderia pseudomallei MSHR346 methylglyoxal synthase YP_002895982.1 1216122 D 536230 CDS YP_002895983.1 237811532 7888298 1217409..1218383 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; NADPH:quinone reductase 1218383 7888298 GBP346_A1262 Burkholderia pseudomallei MSHR346 NADPH:quinone reductase YP_002895983.1 1217409 D 536230 CDS YP_002895984.1 237811533 7890805 1218389..1218679 1 NC_012695.1 hypothetical protein 1218679 7890805 GBP346_A1263 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895984.1 1218389 D 536230 CDS YP_002895985.1 237811534 7889251 1218809..1218940 1 NC_012695.1 identified by match to protein family HMM PF09604; hypothetical protein 1218940 kdpF 7889251 kdpF Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895985.1 1218809 D 536230 CDS YP_002895986.1 237811535 7887337 1218937..1220745 1 NC_012695.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1220745 kdpA 7887337 kdpA Burkholderia pseudomallei MSHR346 potassium-transporting ATPase subunit A YP_002895986.1 1218937 D 536230 CDS YP_002895987.1 237811536 7887429 1220742..1222901 1 NC_012695.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1222901 kdpB 7887429 kdpB Burkholderia pseudomallei MSHR346 potassium-transporting ATPase subunit B YP_002895987.1 1220742 D 536230 CDS YP_002895988.1 237811537 7889627 1222914..1223495 1 NC_012695.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 1223495 kdpC 7889627 kdpC Burkholderia pseudomallei MSHR346 potassium-transporting ATPase subunit C YP_002895988.1 1222914 D 536230 CDS YP_002895989.1 237811538 7888696 1223503..1223766 1 NC_012695.1 hypothetical protein 1223766 7888696 GBP346_A1268 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895989.1 1223503 D 536230 CDS YP_002895990.1 237811539 7889451 1223763..1226744 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor protein KdpD 1226744 7889451 GBP346_A1269 Burkholderia pseudomallei MSHR346 sensor protein KdpD YP_002895990.1 1223763 D 536230 CDS YP_002895991.1 237811540 7888044 1226731..1227435 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; KDP operon transcriptional regulatory protein KdpE 1227435 7888044 GBP346_A1270 Burkholderia pseudomallei MSHR346 KDP operon transcriptional regulatory protein KdpE YP_002895991.1 1226731 D 536230 CDS YP_002895992.1 237811541 7889922 complement(1227620..1227787) 1 NC_012695.1 hypothetical protein 1227787 7889922 GBP346_A1271 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895992.1 1227620 R 536230 CDS YP_002895993.1 237811542 7890386 1227808..1228104 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03891; hypothetical protein 1228104 7890386 GBP346_A1272 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895993.1 1227808 D 536230 CDS YP_002895994.1 237811543 7887546 1228320..1228640 1 NC_012695.1 identified by match to protein family HMM PF00893; SugE protein 1228640 7887546 GBP346_A1273 Burkholderia pseudomallei MSHR346 SugE protein YP_002895994.1 1228320 D 536230 CDS YP_002895995.1 237811544 7889824 1228832..1229449 1 NC_012695.1 hypothetical protein 1229449 7889824 GBP346_A1274 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895995.1 1228832 D 536230 CDS YP_002895996.1 237811545 7888263 1229446..1232097 1 NC_012695.1 identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein 1232097 7888263 GBP346_A1275 Burkholderia pseudomallei MSHR346 efflux ABC transporter, permease protein YP_002895996.1 1229446 D 536230 CDS YP_002895997.1 237811546 7887349 1232094..1232216 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative globin 1232216 7887349 GBP346_A1276 Burkholderia pseudomallei MSHR346 putative globin YP_002895997.1 1232094 D 536230 CDS YP_002895998.1 237811547 7890887 1232197..1232607 1 NC_012695.1 identified by match to protein family HMM PF01152; globin family protein 1232607 7890887 GBP346_A1277 Burkholderia pseudomallei MSHR346 globin family protein YP_002895998.1 1232197 D 536230 CDS YP_002895999.1 237811548 7889219 1232629..1232757 1 NC_012695.1 hypothetical protein 1232757 7889219 GBP346_A1278 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002895999.1 1232629 D 536230 CDS YP_002896000.1 237811549 7888926 1232718..1233449 1 NC_012695.1 identified by match to protein family HMM PF07973; threonyl and alanyl tRNA synthetase domain protein 1233449 7888926 GBP346_A1279 Burkholderia pseudomallei MSHR346 threonyl and alanyl tRNA synthetase domain protein YP_002896000.1 1232718 D 536230 CDS YP_002896001.1 237811550 7887772 1233446..1234087 1 NC_012695.1 identified by match to protein family HMM PF06041; hypothetical protein 1234087 7887772 GBP346_A1280 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896001.1 1233446 D 536230 CDS YP_002896002.1 237811551 7889457 1234431..1235825 1 NC_012695.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1235825 7889457 GBP346_A1281 Burkholderia pseudomallei MSHR346 amidase YP_002896002.1 1234431 D 536230 CDS YP_002896003.1 237811552 7888411 1236091..1237371 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 1237371 7888411 GBP346_A1282 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002896003.1 1236091 D 536230 CDS YP_002896004.1 237811553 7890363 1237421..1237546 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1237546 7890363 GBP346_A1283 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896004.1 1237421 D 536230 CDS YP_002896005.1 237811554 7888543 complement(1237682..1239589) 1 NC_012695.1 glycosyltransferase of PMT family 1239589 7888543 GBP346_A1284 Burkholderia pseudomallei MSHR346 glycosyltransferase of PMT family YP_002896005.1 1237682 R 536230 CDS YP_002896006.1 237811555 7886870 complement(1240083..1240841) 1 NC_012695.1 Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 1240841 7886870 GBP346_A1286 Burkholderia pseudomallei MSHR346 glucose-1-dehydrogenase YP_002896006.1 1240083 R 536230 CDS YP_002896007.1 237811556 7889643 complement(1241259..1241846) 1 NC_012695.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 1241846 7889643 GBP346_A1287 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896007.1 1241259 R 536230 CDS YP_002896008.1 237811557 7890342 complement(1241843..1242604) 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional reguator, TetR family 1242604 7890342 GBP346_A1288 Burkholderia pseudomallei MSHR346 transcriptional reguator, TetR family YP_002896008.1 1241843 R 536230 CDS YP_002896009.1 237811558 7889724 complement(1242799..1243344) 1 NC_012695.1 identified by match to protein family HMM PF01219; prokaryotic diacylglycerol kinase 1243344 7889724 GBP346_A1289 Burkholderia pseudomallei MSHR346 prokaryotic diacylglycerol kinase YP_002896009.1 1242799 R 536230 CDS YP_002896010.1 237811559 7889753 complement(1243353..1244387) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 1244387 7889753 GBP346_A1290 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002896010.1 1243353 R 536230 CDS YP_002896011.1 237811560 7888503 complement(1244409..1245347) 1 NC_012695.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1245347 7888503 GBP346_A1291 Burkholderia pseudomallei MSHR346 Ser/Thr protein phosphatase family protein YP_002896011.1 1244409 R 536230 CDS YP_002896012.1 237811561 7887488 complement(1245438..1245947) 1 NC_012695.1 identified by match to protein family HMM PF06271; RDD family protein 1245947 7887488 GBP346_A1292 Burkholderia pseudomallei MSHR346 RDD family protein YP_002896012.1 1245438 R 536230 CDS YP_002896013.1 237811562 7888313 complement(1245954..1246709) 1 NC_012695.1 hypothetical protein 1246709 7888313 GBP346_A1293 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896013.1 1245954 R 536230 CDS YP_002896014.1 237811563 7888774 complement(1246740..1247162) 1 NC_012695.1 hypothetical protein 1247162 7888774 GBP346_A1294 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896014.1 1246740 R 536230 CDS YP_002896015.1 237811564 7888432 complement(1247159..1247719) 1 NC_012695.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1247719 7888432 GBP346_A1295 Burkholderia pseudomallei MSHR346 RNA polymerase factor sigma-70 YP_002896015.1 1247159 R 536230 CDS YP_002896016.1 237811565 7889612 1247847..1247987 1 NC_012695.1 hypothetical protein 1247987 7889612 GBP346_A1296 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896016.1 1247847 D 536230 CDS YP_002896017.1 237811566 7890226 1248115..1249878 1 NC_012695.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 1249878 ilvB 7890226 ilvB Burkholderia pseudomallei MSHR346 acetolactate synthase 3 catalytic subunit YP_002896017.1 1248115 D 536230 CDS YP_002896018.1 237811567 7887573 1249990..1250481 1 NC_012695.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1250481 ilvH 7887573 ilvH Burkholderia pseudomallei MSHR346 acetolactate synthase 3 regulatory subunit YP_002896018.1 1249990 D 536230 CDS YP_002896019.1 237811568 7888050 1250564..1251580 1 NC_012695.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1251580 ilvC_1 7888050 ilvC_1 Burkholderia pseudomallei MSHR346 ketol-acid reductoisomerase YP_002896019.1 1250564 D 536230 CDS YP_002896020.1 237811569 7890777 1251702..1252352 1 NC_012695.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1252352 7890777 GBP346_A1300 Burkholderia pseudomallei MSHR346 phosphatidylserine decarboxylase YP_002896020.1 1251702 D 536230 CDS YP_002896021.1 237811570 7890303 1252369..1253241 1 NC_012695.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 1253241 7890303 GBP346_A1301 Burkholderia pseudomallei MSHR346 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002896021.1 1252369 D 536230 CDS YP_002896022.1 237811571 7890159 1253601..1255148 1 NC_012695.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1255148 leuA 7890159 leuA Burkholderia pseudomallei MSHR346 2-isopropylmalate synthase YP_002896022.1 1253601 D 536230 CDS YP_002896023.1 237811572 7887718 complement(1255283..1256830) 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; inorganic anion transporter, SulP family 1256830 7887718 GBP346_A1303 Burkholderia pseudomallei MSHR346 inorganic anion transporter, SulP family YP_002896023.1 1255283 R 536230 CDS YP_002896024.1 237811573 7890452 complement(1256887..1257522) 1 NC_012695.1 identified by match to protein family HMM PF00484; carbonate dehydratase 1257522 7890452 GBP346_A1304 Burkholderia pseudomallei MSHR346 carbonate dehydratase YP_002896024.1 1256887 R 536230 CDS YP_002896025.1 237811574 7890627 complement(1257966..1258466) 1 NC_012695.1 putative lipoprotein 1258466 7890627 GBP346_A1305 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896025.1 1257966 R 536230 CDS YP_002896026.1 237811575 7890688 1258465..1258893 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1258893 7890688 GBP346_A1306 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896026.1 1258465 D 536230 CDS YP_002896027.1 237811576 7888456 1258845..1260122 1 NC_012695.1 ABC-type branched-chain amino acid transport system, periplasmic component 1260122 7888456 GBP346_A1307 Burkholderia pseudomallei MSHR346 ABC-type branched-chain amino acid transport system, periplasmic component YP_002896027.1 1258845 D 536230 CDS YP_002896028.1 237811577 7890749 1260228..1260497 1 NC_012695.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1260497 rpsO 7890749 rpsO Burkholderia pseudomallei MSHR346 30S ribosomal protein S15 YP_002896028.1 1260228 D 536230 CDS YP_002896029.1 237811578 7890930 1260801..1262942 1 NC_012695.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591; polynucleotide phosphorylase/polyadenylase 1262942 pnp 7890930 pnp Burkholderia pseudomallei MSHR346 polynucleotide phosphorylase/polyadenylase YP_002896029.1 1260801 D 536230 CDS YP_002896030.1 237811579 7890515 1263056..1264075 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02824; NADPH:quinone reductase 1264075 7890515 GBP346_A1310 Burkholderia pseudomallei MSHR346 NADPH:quinone reductase YP_002896030.1 1263056 D 536230 CDS YP_002896031.1 237811580 7887531 1264135..1264935 1 NC_012695.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1264935 tpiA 7887531 tpiA Burkholderia pseudomallei MSHR346 triosephosphate isomerase YP_002896031.1 1264135 D 536230 CDS YP_002896032.1 237811581 7887793 1265015..1265392 1 NC_012695.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 1265392 secG 7887793 secG Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecG YP_002896032.1 1265015 D 536230 CDS YP_002896033.1 237811582 7889176 1265741..1266100 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1266100 7889176 GBP346_A1314 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit A YP_002896033.1 1265741 D 536230 CDS YP_002896034.1 237811583 7887412 1266181..1266642 1 NC_012695.1 identified by match to protein family HMM PF01058; match to protein family HMM TIGR01957; NADH-quinone oxidoreductase, b subunit 1266642 7887412 GBP346_A1315 Burkholderia pseudomallei MSHR346 NADH-quinone oxidoreductase, b subunit YP_002896034.1 1266181 D 536230 CDS YP_002896035.1 237811584 7887901 1266663..1267265 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1267265 7887901 GBP346_A1316 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit C YP_002896035.1 1266663 D 536230 CDS YP_002896036.1 237811585 7890015 1267277..1268530 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1268530 nuoD 7890015 nuoD Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit D YP_002896036.1 1267277 D 536230 CDS YP_002896037.1 237811586 7889512 1268699..1269184 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1269184 7889512 GBP346_A1318 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit E YP_002896037.1 1268699 D 536230 CDS YP_002896038.1 237811587 7888213 1269181..1270491 1 NC_012695.1 identified by match to protein family HMM PF01512; match to protein family HMM TIGR01959; NADH oxidoreductase (quinone), f subunit 1270491 nuoF 7888213 nuoF Burkholderia pseudomallei MSHR346 NADH oxidoreductase (quinone), f subunit YP_002896038.1 1269181 D 536230 CDS YP_002896039.1 237811588 7887819 1270574..1272904 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1272904 nuoG 7887819 nuoG Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit G YP_002896039.1 1270574 D 536230 CDS YP_002896040.1 237811589 7887155 1272905..1273969 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1273969 7887155 GBP346_A1321 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit H YP_002896040.1 1272905 D 536230 CDS YP_002896041.1 237811590 7887176 1273985..1274473 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1274473 7887176 GBP346_A1322 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit I YP_002896041.1 1273985 D 536230 CDS YP_002896042.1 237811591 7888065 1274583..1275239 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1275239 7888065 GBP346_A1323 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit J YP_002896042.1 1274583 D 536230 CDS YP_002896043.1 237811592 7890566 1275258..1275563 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1275563 7890566 GBP346_A1324 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit K YP_002896043.1 1275258 D 536230 CDS YP_002896044.1 237811593 7888325 1275581..1277620 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1277620 7888325 GBP346_A1325 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit L YP_002896044.1 1275581 D 536230 CDS YP_002896045.1 237811594 7890751 1277636..1279126 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1279126 nuoM 7890751 nuoM Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit M YP_002896045.1 1277636 D 536230 CDS YP_002896046.1 237811595 7890276 1279151..1280623 1 NC_012695.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1280623 nuoN_1 7890276 nuoN_1 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit N YP_002896046.1 1279151 D 536230 CDS YP_002896047.1 237811596 7890744 1280623..1280928 1 NC_012695.1 hypothetical protein 1280928 7890744 GBP346_A1328 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896047.1 1280623 D 536230 CDS YP_002896048.1 237811597 7888521 1280965..1281555 1 NC_012695.1 identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family 1281555 7888521 GBP346_A1329 Burkholderia pseudomallei MSHR346 pyrophosphatase, MutT/nudix family YP_002896048.1 1280965 D 536230 CDS YP_002896049.1 237811598 7890594 1281707..1282129 1 NC_012695.1 identified by match to protein family HMM PF06676; hypothetical protein 1282129 7890594 GBP346_A1330 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896049.1 1281707 D 536230 CDS YP_002896050.1 237811599 7888318 1282190..1283386 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; acyl-CoA dehydrogenase 1283386 7888318 GBP346_A1331 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase YP_002896050.1 1282190 D 536230 CDS YP_002896051.1 237811600 7887902 1283398..1284531 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 1284531 7887902 GBP346_A1332 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002896051.1 1283398 D 536230 CDS YP_002896052.1 237811601 7887022 1284572..1285030 1 NC_012695.1 identified by match to protein family HMM PF01575; MoaC domain protein 1285030 7887022 GBP346_A1333 Burkholderia pseudomallei MSHR346 MoaC domain protein YP_002896052.1 1284572 D 536230 CDS YP_002896053.1 237811602 7887680 1285027..1285509 1 NC_012695.1 identified by match to protein family HMM PF01575; nodulation protein N 1285509 7887680 GBP346_A1334 Burkholderia pseudomallei MSHR346 nodulation protein N YP_002896053.1 1285027 D 536230 CDS YP_002896054.1 237811603 7889375 1285602..1286864 1 NC_012695.1 parallel beta-helix repeat protein 1286864 7889375 GBP346_A1335 Burkholderia pseudomallei MSHR346 parallel beta-helix repeat protein YP_002896054.1 1285602 D 536230 CDS YP_002896055.1 237811604 7888662 1286861..1287052 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1287052 7888662 GBP346_A1336 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896055.1 1286861 D 536230 CDS YP_002896056.1 237811605 7888842 complement(1287142..1288368) 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 1288368 7888842 GBP346_A1337 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002896056.1 1287142 R 536230 CDS YP_002896057.1 237811606 7889551 complement(1288412..1289518) 1 NC_012695.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 1289518 7889551 GBP346_A1338 Burkholderia pseudomallei MSHR346 phosphotransferase enzyme family protein YP_002896057.1 1288412 R 536230 CDS YP_002896058.1 237811607 7888726 complement(1289546..1290259) 1 NC_012695.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1290259 7888726 GBP346_A1339 Burkholderia pseudomallei MSHR346 phosphoglycerate mutase family protein YP_002896058.1 1289546 R 536230 CDS YP_002896059.1 237811608 7890768 complement(1290269..1291060) 1 NC_012695.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1291060 7890768 GBP346_A1340 Burkholderia pseudomallei MSHR346 enoyl-CoA hydratase YP_002896059.1 1290269 R 536230 CDS YP_002896060.1 237811609 7887013 1291099..1291218 1 NC_012695.1 hypothetical protein 1291218 7887013 GBP346_A1341 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896060.1 1291099 D 536230 CDS YP_002896061.1 237811610 7888734 1291300..1291956 1 NC_012695.1 identified by match to protein family HMM PF02798; glutathione S-transferase family protein 1291956 7888734 GBP346_A1342 Burkholderia pseudomallei MSHR346 glutathione S-transferase family protein YP_002896061.1 1291300 D 536230 CDS YP_002896062.1 237811611 7887883 complement(1292176..1293351) 1 NC_012695.1 catalyzes the transfer of an amino moiety; putative aminotransferase 1293351 7887883 GBP346_A1343 Burkholderia pseudomallei MSHR346 putative aminotransferase YP_002896062.1 1292176 R 536230 CDS YP_002896063.1 237811612 7887587 complement(1293397..1294029) 1 NC_012695.1 nucleotide binding protein PINc 1294029 7887587 GBP346_A1344 Burkholderia pseudomallei MSHR346 nucleotide binding protein PINc YP_002896063.1 1293397 R 536230 CDS YP_002896064.1 237811613 7890458 1294123..1294905 1 NC_012695.1 identified by match to protein family HMM PF03883; hypothetical protein 1294905 7890458 GBP346_A1345 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896064.1 1294123 D 536230 CDS YP_002896065.1 237811614 7887706 1294964..1296118 1 NC_012695.1 identified by match to protein family HMM PF00246; zinc carboxypeptidase family protein 1296118 7887706 GBP346_A1346 Burkholderia pseudomallei MSHR346 zinc carboxypeptidase family protein YP_002896065.1 1294964 D 536230 CDS YP_002896066.1 237811615 7887828 complement(1296329..1296949) 1 NC_012695.1 hypothetical protein 1296949 7887828 GBP346_A1347 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896066.1 1296329 R 536230 CDS YP_002896067.1 237811616 7887526 complement(1297109..1297783) 1 NC_012695.1 hypothetical protein 1297783 7887526 GBP346_A1348 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896067.1 1297109 R 536230 CDS YP_002896068.1 237811617 7889347 complement(1297850..1298941) 1 NC_012695.1 identified by match to protein family HMM PF00196; DNA-binding response regulator 1298941 7889347 GBP346_A1349 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896068.1 1297850 R 536230 CDS YP_002896069.1 237811618 7890553 complement(1298892..1300109) 1 NC_012695.1 hypothetical protein 1300109 7890553 GBP346_A1350 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896069.1 1298892 R 536230 CDS YP_002896070.1 237811619 7890948 1300565..1300681 1 NC_012695.1 hypothetical protein 1300681 7890948 GBP346_A1352 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896070.1 1300565 D 536230 CDS YP_002896071.1 237811620 7889162 1306830..1308719 1 NC_012695.1 identified by match to protein family HMM PF00557; metallopeptidase family M24 1308719 7889162 GBP346_A1357 Burkholderia pseudomallei MSHR346 metallopeptidase family M24 YP_002896071.1 1306830 D 536230 CDS YP_002896072.1 237811621 7888569 complement(1308865..1309938) 1 NC_012695.1 fatty acid desaturase domain protein 1309938 7888569 GBP346_A1358 Burkholderia pseudomallei MSHR346 fatty acid desaturase domain protein YP_002896072.1 1308865 R 536230 CDS YP_002896073.1 237811622 7890804 1310158..1311168 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1311168 7890804 GBP346_A1359 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002896073.1 1310158 D 536230 CDS YP_002896074.1 237811623 7889640 1311488..1312762 1 NC_012695.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1312762 7889640 GBP346_A1360 Burkholderia pseudomallei MSHR346 D-3-phosphoglycerate dehydrogenase YP_002896074.1 1311488 D 536230 CDS YP_002896075.1 237811624 7887565 1312782..1313063 1 NC_012695.1 hypothetical protein 1313063 7887565 GBP346_A1361 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896075.1 1312782 D 536230 CDS YP_002896076.1 237811625 7889381 1313097..1313786 1 NC_012695.1 putative transposase 1313786 7889381 GBP346_A1362 Burkholderia pseudomallei MSHR346 putative transposase YP_002896076.1 1313097 D 536230 CDS YP_002896077.1 237811626 7889060 1313950..1314069 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1314069 7889060 GBP346_A1363 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896077.1 1313950 D 536230 CDS YP_002896078.1 237811627 7888671 complement(1314207..1315232) 1 NC_012695.1 identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR01728; putative aliphatic sulfonates-binding protein 1315232 7888671 GBP346_A1364 Burkholderia pseudomallei MSHR346 putative aliphatic sulfonates-binding protein YP_002896078.1 1314207 R 536230 CDS YP_002896079.1 237811628 7887506 complement(1315229..1315342) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1315342 7887506 GBP346_A1365 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896079.1 1315229 R 536230 CDS YP_002896080.1 237811629 7888231 complement(1315440..1315790) 1 NC_012695.1 hypothetical protein 1315790 7888231 GBP346_A1366 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896080.1 1315440 R 536230 CDS YP_002896081.1 237811630 7887293 1315811..1316053 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1316053 7887293 GBP346_A1367 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896081.1 1315811 D 536230 CDS YP_002896082.1 237811631 7887156 1316121..1317848 1 NC_012695.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensory box histidine kinase/response regulator 1317848 7887156 GBP346_A1368 Burkholderia pseudomallei MSHR346 sensory box histidine kinase/response regulator YP_002896082.1 1316121 D 536230 CDS YP_002896083.1 237811632 7889422 1318072..1319403 1 NC_012695.1 hypothetical protein 1319403 7889422 GBP346_A1369 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896083.1 1318072 D 536230 CDS YP_002896084.1 237811633 7890836 1319443..1319589 1 NC_012695.1 hypothetical protein 1319589 7890836 GBP346_A1370 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896084.1 1319443 D 536230 CDS YP_002896085.1 237811634 7890712 1319865..1320533 1 NC_012695.1 cytochrome c, class I 1320533 7890712 GBP346_A1371 Burkholderia pseudomallei MSHR346 cytochrome c, class I YP_002896085.1 1319865 D 536230 CDS YP_002896086.1 237811635 7889295 1320533..1321825 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 1321825 7889295 GBP346_A1372 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002896086.1 1320533 D 536230 CDS YP_002896087.1 237811636 7890376 1321833..1322015 1 NC_012695.1 hypothetical protein 1322015 7890376 GBP346_A1373 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896087.1 1321833 D 536230 CDS YP_002896088.1 237811637 7890912 1322043..1322600 1 NC_012695.1 identified by match to protein family HMM PF00116; cytochrome c oxidase, subunit II 1322600 7890912 GBP346_A1374 Burkholderia pseudomallei MSHR346 cytochrome c oxidase, subunit II YP_002896088.1 1322043 D 536230 CDS YP_002896089.1 237811638 7887918 1322608..1324212 1 NC_012695.1 identified by match to protein family HMM PF00115; cytochrome c oxidase subunit 1 1324212 7887918 GBP346_A1375 Burkholderia pseudomallei MSHR346 cytochrome c oxidase subunit 1 YP_002896089.1 1322608 D 536230 CDS YP_002896090.1 237811639 7890874 1324209..1324997 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 1324997 7890874 GBP346_A1376 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002896090.1 1324209 D 536230 CDS YP_002896091.1 237811640 7890706 1325046..1325195 1 NC_012695.1 hypothetical protein 1325195 7890706 GBP346_A1377 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896091.1 1325046 D 536230 CDS YP_002896092.1 237811641 7890576 complement(1325551..1327005) 1 NC_012695.1 identified by match to protein family HMM PF08668; hdod domain family protein 1327005 7890576 GBP346_A1378 Burkholderia pseudomallei MSHR346 hdod domain family protein YP_002896092.1 1325551 R 536230 CDS YP_002896093.1 237811642 7888087 complement(1327040..1328875) 1 NC_012695.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box diguanylate cyclase/cyclic diguanylate phosphodiesterase 1328875 7888087 GBP346_A1379 Burkholderia pseudomallei MSHR346 sensory box diguanylate cyclase/cyclic diguanylate phosphodiesterase YP_002896093.1 1327040 R 536230 CDS YP_002896094.1 237811643 7887490 1328844..1328969 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1328969 7887490 GBP346_A1380 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896094.1 1328844 D 536230 CDS YP_002896095.1 237811644 7889710 1329075..1329623 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/TSA family protein 1329623 7889710 GBP346_A1381 Burkholderia pseudomallei MSHR346 antioxidant, AhpC/TSA family protein YP_002896095.1 1329075 D 536230 CDS YP_002896096.1 237811645 7890172 complement(1330147..1330776) 1 NC_012695.1 identified by match to protein family HMM PF01113; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase 1330776 7890172 GBP346_A1382 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase YP_002896096.1 1330147 R 536230 CDS YP_002896097.1 237811646 7887206 1330875..1331057 1 NC_012695.1 hypothetical protein 1331057 7887206 GBP346_A1383 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896097.1 1330875 D 536230 CDS YP_002896098.1 237811647 7888074 complement(1331069..1331395) 1 NC_012695.1 hypothetical protein 1331395 7888074 GBP346_A1384 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896098.1 1331069 R 536230 CDS YP_002896099.1 237811648 7888285 complement(1331392..1334694) 1 NC_012695.1 identified by match to protein family HMM PF00873; multidrug resistance protein MdtC (Multidrug transporter mdtC) 1334694 7888285 GBP346_A1385 Burkholderia pseudomallei MSHR346 multidrug resistance protein MdtC (Multidrug transporter mdtC) YP_002896099.1 1331392 R 536230 CDS YP_002896100.1 237811649 7886699 complement(1334695..1337805) 1 NC_012695.1 identified by match to protein family HMM PF00873; multidrug resistance protein MdtB (Multidrug transporter mdtB) 1337805 7886699 GBP346_A1386 Burkholderia pseudomallei MSHR346 multidrug resistance protein MdtB (Multidrug transporter mdtB) YP_002896100.1 1334695 R 536230 CDS YP_002896101.1 237811650 7888795 complement(1337819..1339138) 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane fusion protein MdtA 1339138 7888795 GBP346_A1387 Burkholderia pseudomallei MSHR346 membrane fusion protein MdtA YP_002896101.1 1337819 R 536230 CDS YP_002896102.1 237811651 7889491 1339160..1339279 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1339279 7889491 GBP346_A1388 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896102.1 1339160 D 536230 CDS YP_002896103.1 237811652 7887674 complement(1339622..1340449) 1 NC_012695.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 1340449 7887674 GBP346_A1389 Burkholderia pseudomallei MSHR346 transcriptional regulator, IclR family YP_002896103.1 1339622 R 536230 CDS YP_002896104.1 237811653 7888987 1340385..1340498 1 NC_012695.1 hypothetical protein 1340498 7888987 GBP346_A1390 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896104.1 1340385 D 536230 CDS YP_002896105.1 237811654 7889925 1340504..1340638 1 NC_012695.1 hypothetical protein 1340638 7889925 GBP346_A1391 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896105.1 1340504 D 536230 CDS YP_002896106.1 237811655 7889273 complement(1340997..1342958) 1 NC_012695.1 alkaline phosphatase 1342958 7889273 GBP346_A1392 Burkholderia pseudomallei MSHR346 alkaline phosphatase YP_002896106.1 1340997 R 536230 CDS YP_002896107.1 237811656 7887999 complement(1342919..1343269) 1 NC_012695.1 hypothetical protein 1343269 7887999 GBP346_A1393 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896107.1 1342919 R 536230 CDS YP_002896108.1 237811657 7888891 1343275..1343730 1 NC_012695.1 hypothetical protein 1343730 7888891 GBP346_A1394 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896108.1 1343275 D 536230 CDS YP_002896109.1 237811658 7889302 1343820..1344281 1 NC_012695.1 identified by match to protein family HMM PF02082; Rrf2 family protein 1344281 7889302 GBP346_A1395 Burkholderia pseudomallei MSHR346 Rrf2 family protein YP_002896109.1 1343820 D 536230 CDS YP_002896110.1 237811659 7887019 1344278..1344397 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1344397 7887019 GBP346_A1396 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896110.1 1344278 D 536230 CDS YP_002896111.1 237811660 7890642 1344533..1345174 1 NC_012695.1 identified by match to protein family HMM PF01370; match to protein family HMM PF05368; NAD-dependent epimerase/dehydratase 1345174 7890642 GBP346_A1397 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase YP_002896111.1 1344533 D 536230 CDS YP_002896112.1 237811661 7888320 complement(1345960..1346616) 1 NC_012695.1 identified by match to protein family HMM PF05995; cysteine dioxygenase type I family 1346616 7888320 GBP346_A1398 Burkholderia pseudomallei MSHR346 cysteine dioxygenase type I family YP_002896112.1 1345960 R 536230 CDS YP_002896113.1 237811662 7888507 1346763..1347230 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 1347230 7888507 GBP346_A1399 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002896113.1 1346763 D 536230 CDS YP_002896114.1 237811663 7890042 complement(1347369..1348139) 1 NC_012695.1 identified by match to protein family HMM PF00005; ferric iron uptake ABC transporter (FeT) family, ATP-binding protein 1348139 7890042 GBP346_A1400 Burkholderia pseudomallei MSHR346 ferric iron uptake ABC transporter (FeT) family, ATP-binding protein YP_002896114.1 1347369 R 536230 CDS YP_002896115.1 237811664 7889549 complement(1348150..1349862) 1 NC_012695.1 identified by match to protein family HMM PF00528; ferric iron uptake ABC transporter (FeT) family, permease protein 1349862 7889549 GBP346_A1401 Burkholderia pseudomallei MSHR346 ferric iron uptake ABC transporter (FeT) family, permease protein YP_002896115.1 1348150 R 536230 CDS YP_002896116.1 237811665 7890248 complement(1349852..1350907) 1 NC_012695.1 identified by match to protein family HMM PF01547; ferric iron uptake ABC transporter 1350907 7890248 GBP346_A1402 Burkholderia pseudomallei MSHR346 ferric iron uptake ABC transporter YP_002896116.1 1349852 R 536230 CDS YP_002896117.1 237811666 7889156 1351031..1351150 1 NC_012695.1 hypothetical protein 1351150 7889156 GBP346_A1403 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896117.1 1351031 D 536230 CDS YP_002896118.1 237811667 7887247 1351147..1351326 1 NC_012695.1 hypothetical protein 1351326 7887247 GBP346_A1404 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896118.1 1351147 D 536230 CDS YP_002896119.1 237811668 7890457 complement(1351478..1352842) 1 NC_012695.1 identified by match to protein family HMM PF00324; proline-specific permease ProY 1352842 7890457 GBP346_A1405 Burkholderia pseudomallei MSHR346 proline-specific permease ProY YP_002896119.1 1351478 R 536230 CDS YP_002896120.1 237811669 7887450 complement(1352839..1353030) 1 NC_012695.1 hypothetical protein 1353030 7887450 GBP346_A1406 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896120.1 1352839 R 536230 CDS YP_002896121.1 237811670 7890541 complement(1353027..1355303) 1 NC_012695.1 identified by match to protein family HMM PF05976; hypothetical protein 1355303 7890541 GBP346_A1407 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896121.1 1353027 R 536230 CDS YP_002896122.1 237811671 7890051 complement(1355604..1355846) 1 NC_012695.1 hypothetical protein 1355846 7890051 GBP346_A1408 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896122.1 1355604 R 536230 CDS YP_002896123.1 237811672 7887837 1355907..1359251 1 NC_012695.1 identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450; exodeoxyribonuclease V, gamma subunit 1359251 recC 7887837 recC Burkholderia pseudomallei MSHR346 exodeoxyribonuclease V, gamma subunit YP_002896123.1 1355907 D 536230 CDS YP_002896124.1 237811673 7887556 1359248..1363030 1 NC_012695.1 identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609; exodeoxyribonuclease V, beta subunit 1363030 recB 7887556 recB Burkholderia pseudomallei MSHR346 exodeoxyribonuclease V, beta subunit YP_002896124.1 1359248 D 536230 CDS YP_002896125.1 237811674 7890786 1363027..1365723 1 NC_012695.1 exodeoxyribonuclease V, alpha subunit 1365723 7890786 GBP346_A1411 Burkholderia pseudomallei MSHR346 exodeoxyribonuclease V, alpha subunit YP_002896125.1 1363027 D 536230 CDS YP_002896126.1 237811675 7888555 1365720..1366124 1 NC_012695.1 identified by match to protein family HMM PF00472; peptidyl-tRNA hydrolase domain protein 1366124 7888555 GBP346_A1412 Burkholderia pseudomallei MSHR346 peptidyl-tRNA hydrolase domain protein YP_002896126.1 1365720 D 536230 CDS YP_002896127.1 237811676 7886839 complement(1366542..1367825) 1 NC_012695.1 identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase 1367825 7886839 GBP346_A1413 Burkholderia pseudomallei MSHR346 cyclic diguanylate phosphodiesterase YP_002896127.1 1366542 R 536230 CDS YP_002896128.1 237811677 7889115 complement(1368294..1368785) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1368785 7889115 GBP346_A1414 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896128.1 1368294 R 536230 CDS YP_002896129.1 237811678 7888980 complement(1368893..1369825) 1 NC_012695.1 identified by match to protein family HMM PF00892; permease of the drug/metabolite transporter 1369825 7888980 GBP346_A1415 Burkholderia pseudomallei MSHR346 permease of the drug/metabolite transporter YP_002896129.1 1368893 R 536230 CDS YP_002896130.1 237811679 7888622 1369952..1370074 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1370074 7888622 GBP346_A1416 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896130.1 1369952 D 536230 CDS YP_002896131.1 237811680 7889506 complement(1370096..1370320) 1 NC_012695.1 putative lipoprotein 1370320 7889506 GBP346_A1417 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896131.1 1370096 R 536230 CDS YP_002896132.1 237811681 7890326 complement(1370572..1370784) 1 NC_012695.1 17 kDa surface antigen 1370784 7890326 GBP346_A1418 Burkholderia pseudomallei MSHR346 17 kDa surface antigen YP_002896132.1 1370572 R 536230 CDS YP_002896133.1 237811682 7889835 complement(1371008..1372939) 1 NC_012695.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1372939 thiC 7889835 thiC Burkholderia pseudomallei MSHR346 thiamine biosynthesis protein ThiC YP_002896133.1 1371008 R 536230 CDS YP_002896134.1 237811683 7886893 complement(1373123..1373401) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1373401 7886893 GBP346_A1421 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896134.1 1373123 R 536230 CDS YP_002896135.1 237811684 7890673 1373568..1373852 1 NC_012695.1 identified by match to protein family HMM TIGR02953; pentapeptide mxkdx repeat protein 1373852 7890673 GBP346_A1422 Burkholderia pseudomallei MSHR346 pentapeptide mxkdx repeat protein YP_002896135.1 1373568 D 536230 CDS YP_002896136.1 237811685 7890664 1373891..1374016 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1374016 7890664 GBP346_A1423 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896136.1 1373891 D 536230 CDS YP_002896137.1 237811686 7889101 1374013..1375965 1 NC_012695.1 identified by match to protein family HMM PF06764; cytochrome B561 1375965 7889101 GBP346_A1424 Burkholderia pseudomallei MSHR346 cytochrome B561 YP_002896137.1 1374013 D 536230 CDS YP_002896138.1 237811687 7888141 1375981..1376772 1 NC_012695.1 identified by match to protein family HMM PF00174; oxidoreductase, molybdopterin-binding 1376772 7888141 GBP346_A1425 Burkholderia pseudomallei MSHR346 oxidoreductase, molybdopterin-binding YP_002896138.1 1375981 D 536230 CDS YP_002896139.1 237811688 7889767 1377088..1377222 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1377222 7889767 GBP346_A1426 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896139.1 1377088 D 536230 CDS YP_002896140.1 237811689 7887550 1377226..1378161 1 NC_012695.1 identified by match to protein family HMM PF00892; integral membrane protein DUF6 1378161 7887550 GBP346_A1427 Burkholderia pseudomallei MSHR346 integral membrane protein DUF6 YP_002896140.1 1377226 D 536230 CDS YP_002896141.1 237811690 7889684 complement(1378579..1379868) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 1379868 7889684 GBP346_A1428 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002896141.1 1378579 R 536230 CDS YP_002896142.1 237811691 7890824 1379783..1379935 1 NC_012695.1 hypothetical protein 1379935 7890824 GBP346_A1429 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896142.1 1379783 D 536230 CDS YP_002896143.1 237811692 7888322 1380090..1380842 1 NC_012695.1 identified by match to protein family HMM PF03988; hypothetical protein 1380842 7888322 GBP346_A1430 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896143.1 1380090 D 536230 CDS YP_002896144.1 237811693 7887660 1380992..1381402 1 NC_012695.1 hypothetical protein 1381402 7887660 GBP346_A1431 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896144.1 1380992 D 536230 CDS YP_002896145.1 237811694 7888707 complement(1381751..1382578) 1 NC_012695.1 identified by match to protein family HMM PF00149; 3',5'-cyclic-nucleotide phosphodiesterase 1382578 7888707 GBP346_A1432 Burkholderia pseudomallei MSHR346 3',5'-cyclic-nucleotide phosphodiesterase YP_002896145.1 1381751 R 536230 CDS YP_002896146.1 237811695 7887624 complement(1382794..1383888) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2) 1383888 7887624 GBP346_A1433 Burkholderia pseudomallei MSHR346 sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2) YP_002896146.1 1382794 R 536230 CDS YP_002896147.1 237811696 7889002 complement(1383819..1383998) 1 NC_012695.1 hypothetical protein 1383998 7889002 GBP346_A1434 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896147.1 1383819 R 536230 CDS YP_002896148.1 237811697 7887254 complement(1383998..1385098) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 1385098 7887254 GBP346_A1435 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002896148.1 1383998 R 536230 CDS YP_002896149.1 237811698 7889155 1385163..1385480 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1385480 7889155 GBP346_A1436 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896149.1 1385163 D 536230 CDS YP_002896150.1 237811699 7890174 1385656..1385859 1 NC_012695.1 hypothetical protein 1385859 7890174 GBP346_A1437 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896150.1 1385656 D 536230 CDS YP_002896151.1 237811700 7890590 complement(1386121..1386945) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 1386945 7890590 GBP346_A1438 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002896151.1 1386121 R 536230 CDS YP_002896152.1 237811701 7887029 complement(1387040..1388101) 1 NC_012695.1 identified by match to protein family HMM PF01547; ABC transporter, periplasmic substrate-binding protein 1388101 7887029 GBP346_A1439 Burkholderia pseudomallei MSHR346 ABC transporter, periplasmic substrate-binding protein YP_002896152.1 1387040 R 536230 CDS YP_002896153.1 237811702 7888813 complement(1388158..1389183) 1 NC_012695.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional repressor, LacI family 1389183 7888813 GBP346_A1440 Burkholderia pseudomallei MSHR346 transcriptional repressor, LacI family YP_002896153.1 1388158 R 536230 CDS YP_002896154.1 237811703 7889746 complement(1389829..1390476) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1390476 7889746 GBP346_A1441 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896154.1 1389829 R 536230 CDS YP_002896155.1 237811704 7888922 complement(1390544..1390999) 1 NC_012695.1 hypothetical protein 1390999 7888922 GBP346_A1442 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896155.1 1390544 R 536230 CDS YP_002896156.1 237811705 7890349 complement(1391001..1391192) 1 NC_012695.1 hypothetical protein 1391192 7890349 GBP346_A1443 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896156.1 1391001 R 536230 CDS YP_002896157.1 237811706 7887864 complement(1391576..1392730) 1 NC_012695.1 hypothetical protein 1392730 7887864 GBP346_A1444 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896157.1 1391576 R 536230 CDS YP_002896158.1 237811707 7890123 1392767..1392991 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1392991 7890123 GBP346_A1445 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896158.1 1392767 D 536230 CDS YP_002896159.1 237811708 7890053 complement(1393096..1394496) 1 NC_012695.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1394496 7890053 GBP346_A1446 Burkholderia pseudomallei MSHR346 diguanylate cyclase YP_002896159.1 1393096 R 536230 CDS YP_002896160.1 237811709 7888201 1394473..1394619 1 NC_012695.1 hypothetical protein 1394619 7888201 GBP346_A1447 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896160.1 1394473 D 536230 CDS YP_002896161.1 237811710 7886991 complement(1394705..1394968) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1394968 7886991 GBP346_A1448 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896161.1 1394705 R 536230 CDS YP_002896162.1 237811711 7886761 1395113..1395739 1 NC_012695.1 identified by match to protein family HMM PF07040; hypothetical protein 1395739 7886761 GBP346_A1449 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896162.1 1395113 D 536230 CDS YP_002896163.1 237811712 7888580 1395792..1396589 1 NC_012695.1 metal-binding integral membrane protein 1396589 7888580 GBP346_A1450 Burkholderia pseudomallei MSHR346 metal-binding integral membrane protein YP_002896163.1 1395792 D 536230 CDS YP_002896164.1 237811713 7889987 complement(1396826..1396951) 1 NC_012695.1 hypothetical protein 1396951 7889987 GBP346_A1451 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896164.1 1396826 R 536230 CDS YP_002896165.1 237811714 7889559 complement(1396985..1397623) 1 NC_012695.1 identified by match to protein family HMM PF04299; negative transcriptional regulator 1397623 7889559 GBP346_A1452 Burkholderia pseudomallei MSHR346 negative transcriptional regulator YP_002896165.1 1396985 R 536230 CDS YP_002896166.1 237811715 7889248 1397745..1399286 1 NC_012695.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family 1399286 7889248 GBP346_A1453 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002896166.1 1397745 D 536230 CDS YP_002896167.1 237811716 7886854 complement(1399529..1400023) 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 1400023 7886854 GBP346_A1454 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002896167.1 1399529 R 536230 CDS YP_002896168.1 237811717 7890204 1400075..1400245 1 NC_012695.1 hypothetical protein 1400245 7890204 GBP346_A1455 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896168.1 1400075 D 536230 CDS YP_002896169.1 237811718 7888996 1400122..1402113 1 NC_012695.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase (isomerizing) 1402113 glmS_2 7888996 glmS_2 Burkholderia pseudomallei MSHR346 glutamine-fructose-6-phosphate transaminase (isomerizing) YP_002896169.1 1400122 D 536230 CDS YP_002896170.1 237811719 7887908 complement(1402348..1403679) 1 NC_012695.1 identified by match to protein family HMM PF03055; carotenoid oxygenase 1403679 7887908 GBP346_A1457 Burkholderia pseudomallei MSHR346 carotenoid oxygenase YP_002896170.1 1402348 R 536230 CDS YP_002896171.1 237811720 7890902 complement(1403701..1404402) 1 NC_012695.1 hypothetical protein 1404402 7890902 GBP346_A1458 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896171.1 1403701 R 536230 CDS YP_002896172.1 237811721 7890661 complement(1404402..1404605) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1404605 7890661 GBP346_A1459 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896172.1 1404402 R 536230 CDS YP_002896173.1 237811722 7886869 complement(1404569..1405468) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain protein 1405468 7886869 GBP346_A1460 Burkholderia pseudomallei MSHR346 LysR substrate binding domain protein YP_002896173.1 1404569 R 536230 CDS YP_002896174.1 237811723 7886913 1405719..1406492 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1406492 7886913 GBP346_A1461 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002896174.1 1405719 D 536230 CDS YP_002896175.1 237811724 7890243 complement(1406710..1408089) 1 NC_012695.1 putative lipoprotein 1408089 7890243 GBP346_A1462 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896175.1 1406710 R 536230 CDS YP_002896176.1 237811725 7888899 complement(1408094..1408516) 1 NC_012695.1 hypothetical protein 1408516 7888899 GBP346_A1463 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896176.1 1408094 R 536230 CDS YP_002896177.1 237811726 7889466 complement(1408544..1408951) 1 NC_012695.1 identified by match to protein family HMM PF06073; hypothetical protein 1408951 7889466 GBP346_A1464 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896177.1 1408544 R 536230 CDS YP_002896178.1 237811727 7890555 complement(1408948..1410849) 1 NC_012695.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; nitrite and sulphite reductase 4Fe-4S domain protein 1410849 7890555 GBP346_A1465 Burkholderia pseudomallei MSHR346 nitrite and sulphite reductase 4Fe-4S domain protein YP_002896178.1 1408948 R 536230 CDS YP_002896179.1 237811728 7888991 complement(1410843..1411019) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1411019 7888991 GBP346_A1466 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896179.1 1410843 R 536230 CDS YP_002896180.1 237811729 7886946 1411315..1411488 1 NC_012695.1 hypothetical protein 1411488 7886946 GBP346_A1467 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896180.1 1411315 D 536230 CDS YP_002896181.1 237811730 7890707 complement(1411565..1413040) 1 NC_012695.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; aminotransferase, classes I and II superfamily 1413040 7890707 GBP346_A1468 Burkholderia pseudomallei MSHR346 aminotransferase, classes I and II superfamily YP_002896181.1 1411565 R 536230 CDS YP_002896182.1 237811731 7888581 complement(1413158..1413415) 1 NC_012695.1 hypothetical protein 1413415 7888581 GBP346_A1469 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896182.1 1413158 R 536230 CDS YP_002896183.1 237811732 7887549 complement(1413453..1413731) 1 NC_012695.1 hypothetical protein 1413731 7887549 GBP346_A1470 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896183.1 1413453 R 536230 CDS YP_002896184.1 237811733 7889660 complement(1413728..1414129) 1 NC_012695.1 identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family 1414129 7889660 GBP346_A1471 Burkholderia pseudomallei MSHR346 heat shock protein, Hsp20 family YP_002896184.1 1413728 R 536230 CDS YP_002896185.1 237811734 7887787 complement(1414161..1414598) 1 NC_012695.1 identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family 1414598 7887787 GBP346_A1472 Burkholderia pseudomallei MSHR346 heat shock protein, Hsp20 family YP_002896185.1 1414161 R 536230 CDS YP_002896186.1 237811735 7886757 complement(1414762..1415421) 1 NC_012695.1 hypothetical protein 1415421 7886757 GBP346_A1473 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896186.1 1414762 R 536230 CDS YP_002896187.1 237811736 7888556 1415405..1415617 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1415617 7888556 GBP346_A1474 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896187.1 1415405 D 536230 CDS YP_002896188.1 237811737 7888196 1415652..1415870 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1415870 7888196 GBP346_A1475 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896188.1 1415652 D 536230 CDS YP_002896189.1 237811738 7886960 1415830..1416042 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1416042 7886960 GBP346_A1476 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896189.1 1415830 D 536230 CDS YP_002896190.1 237811739 7889067 complement(1416092..1416229) 1 NC_012695.1 hypothetical protein 1416229 7889067 GBP346_A1477 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896190.1 1416092 R 536230 CDS YP_002896191.1 237811740 7888993 1416282..1418132 1 NC_012695.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1418132 7888993 GBP346_A1478 Burkholderia pseudomallei MSHR346 phosphoenolpyruvate carboxykinase YP_002896191.1 1416282 D 536230 CDS YP_002896192.1 237811741 7886752 1418227..1419345 1 NC_012695.1 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase NAD binding domain/C- domain protein 1419345 7886752 GBP346_A1479 Burkholderia pseudomallei MSHR346 3-hydroxyacyl-CoA dehydrogenase NAD binding domain/C- domain protein YP_002896192.1 1418227 D 536230 CDS YP_002896193.1 237811742 7888541 complement(1419469..1419729) 1 NC_012695.1 hypothetical protein 1419729 7888541 GBP346_A1480 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896193.1 1419469 R 536230 CDS YP_002896194.1 237811743 7889089 complement(1419916..1420776) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1420776 7889089 GBP346_A1481 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896194.1 1419916 R 536230 CDS YP_002896195.1 237811744 7889597 1421035..1421430 1 NC_012695.1 identified by match to protein family HMM PF03817; match to protein family HMM TIGR00807; malonate transporter, MadL subunit 1421430 madL 7889597 madL Burkholderia pseudomallei MSHR346 malonate transporter, MadL subunit YP_002896195.1 1421035 D 536230 CDS YP_002896196.1 237811745 7888759 1421444..1422211 1 NC_012695.1 identified by match to protein family HMM PF03818; match to protein family HMM TIGR00808; malonate transporter, MadM subunit 1422211 madM 7888759 madM Burkholderia pseudomallei MSHR346 malonate transporter, MadM subunit YP_002896196.1 1421444 D 536230 CDS YP_002896197.1 237811746 7887417 1422232..1422516 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1422516 7887417 GBP346_A1484 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896197.1 1422232 D 536230 CDS YP_002896198.1 237811747 7887659 1422513..1424159 1 NC_012695.1 identified by match to protein family HMM TIGR01110; malonate decarboxylase, alpha subunit 1424159 mdcA 7887659 mdcA Burkholderia pseudomallei MSHR346 malonate decarboxylase, alpha subunit YP_002896198.1 1422513 D 536230 CDS YP_002896199.1 237811748 7887498 1424173..1424490 1 NC_012695.1 acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 1424490 mdcC 7887498 mdcC Burkholderia pseudomallei MSHR346 malonate decarboxylase subunit delta YP_002896199.1 1424173 D 536230 CDS YP_002896200.1 237811749 7889487 1424487..1425434 1 NC_012695.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1425434 mdcD 7889487 mdcD Burkholderia pseudomallei MSHR346 malonate decarboxylase subunit beta YP_002896200.1 1424487 D 536230 CDS YP_002896201.1 237811750 7887911 1425421..1426146 1 NC_012695.1 identified by match to protein family HMM PF06833; match to protein family HMM TIGR03134; malonate decarboxylase, gamma subunit 1426146 mdcE 7887911 mdcE Burkholderia pseudomallei MSHR346 malonate decarboxylase, gamma subunit YP_002896201.1 1425421 D 536230 CDS YP_002896202.1 237811751 7889721 1426121..1427047 1 NC_012695.1 catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1427047 mdcG 7889721 mdcG Burkholderia pseudomallei MSHR346 phosphoribosyl-dephospho-CoA transferase YP_002896202.1 1426121 D 536230 CDS YP_002896203.1 237811752 7890331 1427044..1428405 1 NC_012695.1 identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132; triphosphoribosyl-dephospho-CoA synthase 1428405 7890331 GBP346_A1490 Burkholderia pseudomallei MSHR346 triphosphoribosyl-dephospho-CoA synthase YP_002896203.1 1427044 D 536230 CDS YP_002896204.1 237811753 7887352 1428402..1429340 1 NC_012695.1 identified by match to protein family HMM TIGR03131; malonate decarboxylase, epsilon subunit 1429340 mdcH 7887352 mdcH Burkholderia pseudomallei MSHR346 malonate decarboxylase, epsilon subunit YP_002896204.1 1428402 D 536230 CDS YP_002896205.1 237811754 7888085 1429374..1429979 1 NC_012695.1 hypothetical protein 1429979 7888085 GBP346_A1492 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896205.1 1429374 D 536230 CDS YP_002896206.1 237811755 7887034 1430499..1431380 1 NC_012695.1 hypothetical protein 1431380 7887034 GBP346_A1493 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896206.1 1430499 D 536230 CDS YP_002896207.1 237811756 7889604 1431800..1432429 1 NC_012695.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 1432429 7889604 GBP346_A1494 Burkholderia pseudomallei MSHR346 glutathione S-transferase YP_002896207.1 1431800 D 536230 CDS YP_002896208.1 237811757 7887424 1432746..1432964 1 NC_012695.1 hypothetical protein 1432964 7887424 GBP346_A1496 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896208.1 1432746 D 536230 CDS YP_002896209.1 237811758 7890605 complement(1432934..1434421) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 1434421 7890605 GBP346_A1495 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002896209.1 1432934 R 536230 CDS YP_002896210.1 237811759 7888761 1434669..1434791 1 NC_012695.1 hypothetical protein 1434791 7888761 GBP346_A1497 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896210.1 1434669 D 536230 CDS YP_002896211.1 237811760 7888354 1434869..1435288 1 NC_012695.1 identified by match to protein family HMM PF02694; hypothetical protein 1435288 7888354 GBP346_A1498 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896211.1 1434869 D 536230 CDS YP_002896212.1 237811761 7887194 complement(1435678..1436439) 1 NC_012695.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1436439 dnaQ 7887194 dnaQ Burkholderia pseudomallei MSHR346 DNA polymerase III subunit epsilon YP_002896212.1 1435678 R 536230 CDS YP_002896213.1 237811762 7888064 complement(1436458..1436904) 1 NC_012695.1 identified by match to protein family HMM PF00075; ribonuclease HI 1436904 rnhA 7888064 rnhA Burkholderia pseudomallei MSHR346 ribonuclease HI YP_002896213.1 1436458 R 536230 CDS YP_002896214.1 237811763 7888916 complement(1436901..1437767) 1 NC_012695.1 identified by match to protein family HMM PF08241; methyltransferase type 11 1437767 7888916 GBP346_A1501 Burkholderia pseudomallei MSHR346 methyltransferase type 11 YP_002896214.1 1436901 R 536230 CDS YP_002896215.1 237811764 7889831 1437734..1438540 1 NC_012695.1 identified by match to protein family HMM PF00753; match to protein family HMM TIGR03413; hydroxyacylglutathione hydrolase 1438540 gloB 7889831 gloB Burkholderia pseudomallei MSHR346 hydroxyacylglutathione hydrolase YP_002896215.1 1437734 D 536230 CDS YP_002896216.1 237811765 7887783 1438717..1440285 1 NC_012695.1 identified by match to protein family HMM PF01464; match to protein family HMM PF01476; match to protein family HMM PF06474; lytic transglycosylase catalytic 1440285 7887783 GBP346_A1503 Burkholderia pseudomallei MSHR346 lytic transglycosylase catalytic YP_002896216.1 1438717 D 536230 CDS YP_002896217.1 237811766 7889666 1440420..1441658 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1441658 7889666 GBP346_A1504 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002896217.1 1440420 D 536230 CDS YP_002896218.1 237811767 7886773 complement(1441765..1442907) 1 NC_012695.1 hypothetical protein 1442907 7886773 GBP346_A1505 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896218.1 1441765 R 536230 CDS YP_002896219.1 237811768 7889090 1442920..1443054 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1443054 7889090 GBP346_A1506 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896219.1 1442920 D 536230 CDS YP_002896220.1 237811769 7890135 1443102..1444157 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1444157 7890135 GBP346_A1507 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002896220.1 1443102 D 536230 CDS YP_002896221.1 237811770 7888319 complement(1444343..1444486) 1 NC_012695.1 hypothetical protein 1444486 7888319 GBP346_A1508 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896221.1 1444343 R 536230 CDS YP_002896222.1 237811771 7890934 1444552..1445697 1 NC_012695.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1445697 carA 7890934 carA Burkholderia pseudomallei MSHR346 carbamoyl phosphate synthase small subunit YP_002896222.1 1444552 D 536230 CDS YP_002896223.1 237811772 7888672 1445729..1446391 1 NC_012695.1 identified by match to protein family HMM PF01810; leucine export protein LeuE 1446391 7888672 GBP346_A1510 Burkholderia pseudomallei MSHR346 leucine export protein LeuE YP_002896223.1 1445729 D 536230 CDS YP_002896224.1 237811773 7887561 1446443..1449697 1 NC_012695.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1449697 carB 7887561 carB Burkholderia pseudomallei MSHR346 carbamoyl phosphate synthase large subunit YP_002896224.1 1446443 D 536230 CDS YP_002896225.1 237811774 7888790 1449816..1450292 1 NC_012695.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1450292 greA 7888790 greA Burkholderia pseudomallei MSHR346 transcription elongation factor GreA YP_002896225.1 1449816 D 536230 CDS YP_002896226.1 237811775 7889860 1450292..1450795 1 NC_012695.1 hypothetical protein 1450795 7889860 GBP346_A1513 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896226.1 1450292 D 536230 CDS YP_002896227.1 237811776 7887153 complement(1450866..1451420) 1 NC_012695.1 identified by match to protein family HMM PF01985; CRS1 1451420 7887153 GBP346_A1514 Burkholderia pseudomallei MSHR346 CRS1 YP_002896227.1 1450866 R 536230 CDS YP_002896228.1 237811777 7888109 complement(1451439..1451591) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1451591 7888109 GBP346_A1515 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896228.1 1451439 R 536230 CDS YP_002896229.1 237811778 7887148 1451518..1452276 1 NC_012695.1 identified by match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J 1452276 rrmJ 7887148 rrmJ Burkholderia pseudomallei MSHR346 ribosomal RNA large subunit methyltransferase J YP_002896229.1 1451518 D 536230 CDS YP_002896230.1 237811779 7890270 1452444..1454330 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protease FtsH 1454330 7890270 GBP346_A1517 Burkholderia pseudomallei MSHR346 cell division protease FtsH YP_002896230.1 1452444 D 536230 CDS YP_002896231.1 237811780 7888046 1454443..1455333 1 NC_012695.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 1455333 folP 7888046 folP Burkholderia pseudomallei MSHR346 dihydropteroate synthase YP_002896231.1 1454443 D 536230 CDS YP_002896232.1 237811781 7889007 1455359..1456717 1 NC_012695.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1456717 glmM 7889007 glmM Burkholderia pseudomallei MSHR346 phosphoglucosamine mutase YP_002896232.1 1455359 D 536230 CDS YP_002896233.1 237811782 7887648 1457153..1458181 1 NC_012695.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter, phosphate-binding protein PstS 1458181 pstS 7887648 pstS Burkholderia pseudomallei MSHR346 phosphate ABC transporter, phosphate-binding protein PstS YP_002896233.1 1457153 D 536230 CDS YP_002896234.1 237811783 7888712 1458336..1459274 1 NC_012695.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 1459274 pstC 7888712 pstC Burkholderia pseudomallei MSHR346 phosphate transporter permease subunit PstC YP_002896234.1 1458336 D 536230 CDS YP_002896235.1 237811784 7889410 1459271..1460164 1 NC_012695.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1460164 pstA 7889410 pstA Burkholderia pseudomallei MSHR346 phosphate transporter permease subunit PtsA YP_002896235.1 1459271 D 536230 CDS YP_002896236.1 237811785 7888849 1460180..1461028 1 NC_012695.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1461028 pstB 7888849 pstB Burkholderia pseudomallei MSHR346 phosphate transporter ATP-binding protein YP_002896236.1 1460180 D 536230 CDS YP_002896237.1 237811786 7890208 1461048..1461752 1 NC_012695.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 1461752 phoU 7890208 phoU Burkholderia pseudomallei MSHR346 phosphate transport system regulatory protein PhoU YP_002896237.1 1461048 D 536230 CDS YP_002896238.1 237811787 7887389 1461781..1462482 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154; phosphate regulon transcriptional regulatory protein PhoB 1462482 phoB 7887389 phoB Burkholderia pseudomallei MSHR346 phosphate regulon transcriptional regulatory protein PhoB YP_002896238.1 1461781 D 536230 CDS YP_002896239.1 237811788 7889460 1462552..1463862 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR02966; phosphate regulon sensor kinase PhoR 1463862 phoR 7889460 phoR Burkholderia pseudomallei MSHR346 phosphate regulon sensor kinase PhoR YP_002896239.1 1462552 D 536230 CDS YP_002896240.1 237811789 7888793 complement(1464063..1466123) 1 NC_012695.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1466123 ppk 7888793 ppk Burkholderia pseudomallei MSHR346 polyphosphate kinase YP_002896240.1 1464063 R 536230 CDS YP_002896241.1 237811790 7890879 1466399..1467913 1 NC_012695.1 identified by match to protein family HMM PF02541; exopolyphosphatase 1467913 7890879 GBP346_A1528 Burkholderia pseudomallei MSHR346 exopolyphosphatase YP_002896241.1 1466399 D 536230 CDS YP_002896242.1 237811791 7888272 complement(1468226..1468669) 1 NC_012695.1 hypothetical protein 1468669 7888272 GBP346_A1529 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896242.1 1468226 R 536230 CDS YP_002896243.1 237811792 7886750 1469170..1470243 1 NC_012695.1 PAP2 family protein 1470243 7886750 GBP346_A1530 Burkholderia pseudomallei MSHR346 PAP2 family protein YP_002896243.1 1469170 D 536230 CDS YP_002896244.1 237811793 7888451 1470365..1470934 1 NC_012695.1 hypothetical protein 1470934 7888451 GBP346_A1531 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896244.1 1470365 D 536230 CDS YP_002896245.1 237811794 7887489 complement(1471111..1471248) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1471248 7887489 GBP346_A1532 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896245.1 1471111 R 536230 CDS YP_002896246.1 237811795 7888772 complement(1471355..1471612) 1 NC_012695.1 hypothetical protein 1471612 7888772 GBP346_A1533 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896246.1 1471355 R 536230 CDS YP_002896247.1 237811796 7886740 1471656..1471967 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1471967 7886740 GBP346_A1534 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896247.1 1471656 D 536230 CDS YP_002896248.1 237811797 7889580 complement(1472286..1472546) 1 NC_012695.1 hypothetical protein 1472546 7889580 GBP346_A1535 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896248.1 1472286 R 536230 CDS YP_002896249.1 237811798 7887839 complement(1472543..1473025) 1 NC_012695.1 hypothetical protein 1473025 7887839 GBP346_A1536 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896249.1 1472543 R 536230 CDS YP_002896250.1 237811799 7889190 1473515..1473976 1 NC_012695.1 identified by similarity to SP:P76502; match to protein family HMM PF00300; match to protein family HMM TIGR00249; phosphohistidine phosphatase SixA 1473976 7889190 GBP346_A1538 Burkholderia pseudomallei MSHR346 phosphohistidine phosphatase SixA YP_002896250.1 1473515 D 536230 CDS YP_002896251.1 237811800 7890306 1474128..1474946 1 NC_012695.1 hypothetical protein 1474946 7890306 GBP346_A1539 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896251.1 1474128 D 536230 CDS YP_002896252.1 237811801 7887119 complement(1475111..1475242) 1 NC_012695.1 hypothetical protein 1475242 7887119 GBP346_A1540 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896252.1 1475111 R 536230 CDS YP_002896253.1 237811802 7887900 complement(1475306..1475476) 1 NC_012695.1 hypothetical protein 1475476 7887900 GBP346_A1541 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896253.1 1475306 R 536230 CDS YP_002896254.1 237811803 7889403 1475644..1475835 1 NC_012695.1 putative lipoprotein 1475835 7889403 GBP346_A1542 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896254.1 1475644 D 536230 CDS YP_002896255.1 237811804 7887627 complement(1476088..1477404) 1 NC_012695.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; DNA-damage-inducible protein F 1477404 7887627 GBP346_A1543 Burkholderia pseudomallei MSHR346 DNA-damage-inducible protein F YP_002896255.1 1476088 R 536230 CDS YP_002896256.1 237811805 7887207 complement(1477487..1477804) 1 NC_012695.1 hypothetical protein 1477804 7887207 GBP346_A1544 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896256.1 1477487 R 536230 CDS YP_002896257.1 237811806 7888467 complement(1478102..1479727) 1 NC_012695.1 identified by match to protein family HMM PF00501; acetyl-coenzyme A synthetase 1479727 7888467 GBP346_A1545 Burkholderia pseudomallei MSHR346 acetyl-coenzyme A synthetase YP_002896257.1 1478102 R 536230 CDS YP_002896258.1 237811807 7887181 1479707..1479820 1 NC_012695.1 hypothetical protein 1479820 7887181 GBP346_A1546 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896258.1 1479707 D 536230 CDS YP_002896259.1 237811808 7887699 1479886..1480005 1 NC_012695.1 hypothetical protein 1480005 7887699 GBP346_A1547 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896259.1 1479886 D 536230 CDS YP_002896260.1 237811809 7887430 complement(1480083..1480784) 1 NC_012695.1 identified by match to protein family HMM PF01476; match to protein family HMM PF01551; LysM domain/M23 peptidase domain protein 1480784 7887430 GBP346_A1548 Burkholderia pseudomallei MSHR346 LysM domain/M23 peptidase domain protein YP_002896260.1 1480083 R 536230 CDS YP_002896261.1 237811810 7889520 complement(1481081..1481989) 1 NC_012695.1 identified by match to protein family HMM PF01263; aldose 1-epimerase subfamily 1481989 7889520 GBP346_A1549 Burkholderia pseudomallei MSHR346 aldose 1-epimerase subfamily YP_002896261.1 1481081 R 536230 CDS YP_002896262.1 237811811 7888834 1482537..1483367 1 NC_012695.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1483367 7888834 GBP346_A1550 Burkholderia pseudomallei MSHR346 undecaprenyl pyrophosphate phosphatase YP_002896262.1 1482537 D 536230 CDS YP_002896263.1 237811812 7889182 1485024..1485146 1 NC_012695.1 hypothetical protein 1485146 7889182 GBP346_A1552 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896263.1 1485024 D 536230 CDS YP_002896264.1 237811813 7890359 complement(1485323..1485451) 1 NC_012695.1 hypothetical protein 1485451 7890359 GBP346_A1553 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896264.1 1485323 R 536230 CDS YP_002896265.1 237811814 7887937 1486962..1489736 1 NC_012695.1 identified by match to protein family HMM PF09718; putative phage HK97 tail length tape measure-related protein 1489736 7887937 GBP346_A1554 Burkholderia pseudomallei MSHR346 putative phage HK97 tail length tape measure-related protein YP_002896265.1 1486962 D 536230 CDS YP_002896266.1 237811815 7887043 1489822..1491399 1 NC_012695.1 identified by match to protein family HMM PF04586; putative prohead protease 1491399 7887043 GBP346_A1555 Burkholderia pseudomallei MSHR346 putative prohead protease YP_002896266.1 1489822 D 536230 CDS YP_002896267.1 237811816 7889929 1492866..1493102 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1493102 7889929 GBP346_A1556 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896267.1 1492866 D 536230 CDS YP_002896268.1 237811817 7890182 1494629..1494919 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1494919 7890182 GBP346_A1557 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896268.1 1494629 D 536230 CDS YP_002896269.1 237811818 7888553 1495180..1495929 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1495929 7888553 GBP346_A1558 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896269.1 1495180 D 536230 CDS YP_002896270.1 237811819 7887575 complement(1495975..1498020) 1 NC_012695.1 putative transposon gamma-delta 80.3 kDa protein (Transposon rotein TnpX) 1498020 7887575 GBP346_A1559 Burkholderia pseudomallei MSHR346 putative transposon gamma-delta 80.3 kDa protein (Transposon rotein TnpX) YP_002896270.1 1495975 R 536230 CDS YP_002896271.1 237811820 7888647 1499255..1499431 1 NC_012695.1 DNA-binding protein, CopG family 1499431 7888647 GBP346_A1560 Burkholderia pseudomallei MSHR346 DNA-binding protein, CopG family YP_002896271.1 1499255 D 536230 CDS YP_002896272.1 237811821 7889748 complement(1499782..1499901) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1499901 7889748 GBP346_A1561 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896272.1 1499782 R 536230 CDS YP_002896273.1 237811822 7889395 1500368..1501159 1 NC_012695.1 hypothetical protein 1501159 7889395 GBP346_A1563 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896273.1 1500368 D 536230 CDS YP_002896274.1 237811823 7886980 complement(1501156..1502175) 1 NC_012695.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1502175 7886980 GBP346_A1562 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002896274.1 1501156 R 536230 CDS YP_002896275.1 237811824 7888970 complement(1502334..1502579) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family 1502579 7888970 GBP346_A1564 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002896275.1 1502334 R 536230 CDS YP_002896276.1 237811825 7888256 1502727..1502933 1 NC_012695.1 hypothetical protein 1502933 7888256 GBP346_A1565 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896276.1 1502727 D 536230 CDS YP_002896277.1 237811826 7886882 complement(1502954..1503667) 1 NC_012695.1 hypothetical protein 1503667 7886882 GBP346_A1566 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896277.1 1502954 R 536230 CDS YP_002896278.1 237811827 7887832 complement(1503676..1504197) 1 NC_012695.1 hypothetical protein 1504197 7887832 GBP346_A1567 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896278.1 1503676 R 536230 CDS YP_002896279.1 237811828 7888116 complement(1504154..1504603) 1 NC_012695.1 hypothetical protein 1504603 7888116 GBP346_A1568 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896279.1 1504154 R 536230 CDS YP_002896280.1 237811829 7886774 complement(1504620..1505126) 1 NC_012695.1 hypothetical protein 1505126 7886774 GBP346_A1569 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896280.1 1504620 R 536230 CDS YP_002896281.1 237811830 7888766 complement(1505123..1505545) 1 NC_012695.1 identified by match to protein family HMM PF05488; PAAR motif protein 1505545 7888766 GBP346_A1570 Burkholderia pseudomallei MSHR346 PAAR motif protein YP_002896281.1 1505123 R 536230 CDS YP_002896282.1 237811831 7889411 1506049..1506333 1 NC_012695.1 hypothetical protein 1506333 7889411 GBP346_A1571 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896282.1 1506049 D 536230 CDS YP_002896283.1 237811832 7888243 1506369..1508183 1 NC_012695.1 identified by match to protein family HMM PF02409; match to protein family HMM PF05583; match to protein family HMM PF09278; match to protein family HMM TIGR00027; transcriptional regulator, MerR family 1508183 7888243 GBP346_A1572 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family YP_002896283.1 1506369 D 536230 CDS YP_002896284.1 237811833 7888611 complement(1508250..1509710) 1 NC_012695.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; transcriptional regulator, GntR family 1509710 7888611 GBP346_A1573 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002896284.1 1508250 R 536230 CDS YP_002896285.1 237811834 7888971 complement(1509728..1509901) 1 NC_012695.1 hypothetical protein 1509901 7888971 GBP346_A1574 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896285.1 1509728 R 536230 CDS YP_002896286.1 237811835 7889650 1509933..1510310 1 NC_012695.1 hypothetical protein 1510310 7889650 GBP346_A1575 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896286.1 1509933 D 536230 CDS YP_002896287.1 237811836 7886999 1510334..1510555 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1510555 7886999 GBP346_A1576 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896287.1 1510334 D 536230 CDS YP_002896288.1 237811837 7888928 1510583..1510975 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; tryptophan repressor binding protein 1510975 7888928 GBP346_A1577 Burkholderia pseudomallei MSHR346 tryptophan repressor binding protein YP_002896288.1 1510583 D 536230 CDS YP_002896289.1 237811838 7888594 complement(1511208..1514000) 1 NC_012695.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase 1514000 treY 7888594 treY Burkholderia pseudomallei MSHR346 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase YP_002896289.1 1511208 R 536230 CDS YP_002896290.1 237811839 7886823 complement(1513997..1516201) 1 NC_012695.1 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 1516201 malQ 7886823 malQ Burkholderia pseudomallei MSHR346 4-alpha-glucanotransferase YP_002896290.1 1513997 R 536230 CDS YP_002896291.1 237811840 7889636 complement(1516198..1518102) 1 NC_012695.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase 1518102 treZ 7889636 treZ Burkholderia pseudomallei MSHR346 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase YP_002896291.1 1516198 R 536230 CDS YP_002896292.1 237811841 7886700 complement(1518129..1520237) 1 NC_012695.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching enzyme GlgX 1520237 glgX 7886700 glgX Burkholderia pseudomallei MSHR346 glycogen debranching enzyme GlgX YP_002896292.1 1518129 R 536230 CDS YP_002896293.1 237811842 7888960 complement(1520290..1522506) 1 NC_012695.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 1522506 glgB 7888960 glgB Burkholderia pseudomallei MSHR346 glycogen branching enzyme YP_002896293.1 1520290 R 536230 CDS YP_002896294.1 237811843 7890079 complement(1522503..1525898) 1 NC_012695.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457; two domain protein: Trehalose synthase 1525898 7890079 GBP346_A1583 Burkholderia pseudomallei MSHR346 two domain protein: Trehalose synthase YP_002896294.1 1522503 R 536230 CDS YP_002896295.1 237811844 7888198 complement(1525895..1529242) 1 NC_012695.1 identified by match to protein family HMM PF00128; alpha amylase family protein 1529242 7888198 GBP346_A1584 Burkholderia pseudomallei MSHR346 alpha amylase family protein YP_002896295.1 1525895 R 536230 CDS YP_002896296.1 237811845 7887296 1529237..1529407 1 NC_012695.1 hypothetical protein 1529407 7887296 GBP346_A1585 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896296.1 1529237 D 536230 CDS YP_002896297.1 237811846 7888704 complement(1529411..1529665) 1 NC_012695.1 hypothetical protein 1529665 7888704 GBP346_A1586 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896297.1 1529411 R 536230 CDS YP_002896298.1 237811847 7889106 1529666..1529815 1 NC_012695.1 hypothetical protein 1529815 7889106 GBP346_A1588 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896298.1 1529666 D 536230 CDS YP_002896299.1 237811848 7889435 complement(1529796..1531274) 1 NC_012695.1 identified by match to protein family HMM PF00041; match to protein family HMM TIGR01840; poly(3-hydroxybutyrate) depolymerase (PHBdepolymerase) 1531274 7889435 GBP346_A1587 Burkholderia pseudomallei MSHR346 poly(3-hydroxybutyrate) depolymerase (PHBdepolymerase) YP_002896299.1 1529796 R 536230 CDS YP_002896300.1 237811849 7887802 complement(1531442..1531780) 1 NC_012695.1 hypothetical protein 1531780 7887802 GBP346_A1589 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896300.1 1531442 R 536230 CDS YP_002896301.1 237811850 7889998 complement(1531983..1532201) 1 NC_012695.1 hypothetical protein 1532201 7889998 GBP346_A1590 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896301.1 1531983 R 536230 CDS YP_002896302.1 237811851 7888375 1532443..1532598 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1532598 7888375 GBP346_A1591 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896302.1 1532443 D 536230 CDS YP_002896303.1 237811852 7887451 complement(1532689..1533129) 1 NC_012695.1 hypothetical protein 1533129 7887451 GBP346_A1592 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896303.1 1532689 R 536230 CDS YP_002896304.1 237811853 7890497 1533147..1533461 1 NC_012695.1 hypothetical protein 1533461 7890497 GBP346_A1593 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896304.1 1533147 D 536230 CDS YP_002896305.1 237811854 7889696 1533631..1535169 1 NC_012695.1 hypothetical protein 1535169 7889696 GBP346_A1594 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896305.1 1533631 D 536230 CDS YP_002896306.1 237811855 7888945 1535253..1535411 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1535411 7888945 GBP346_A1595 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896306.1 1535253 D 536230 CDS YP_002896307.1 237811856 7889382 1535436..1536413 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1536413 7889382 GBP346_A1596 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896307.1 1535436 D 536230 CDS YP_002896308.1 237811857 7888836 1536869..1537654 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1537654 7888836 GBP346_A1597 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896308.1 1536869 D 536230 CDS YP_002896309.1 237811858 7888431 1537696..1537818 1 NC_012695.1 hypothetical protein 1537818 7888431 GBP346_A1598 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896309.1 1537696 D 536230 CDS YP_002896310.1 237811859 7887518 1537833..1538048 1 NC_012695.1 hypothetical protein 1538048 7887518 GBP346_A1599 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896310.1 1537833 D 536230 CDS YP_002896311.1 237811860 7887830 1538080..1538430 1 NC_012695.1 identified by match to protein family HMM PF05666; fels-1 prophage domain protein 1538430 7887830 GBP346_A1600 Burkholderia pseudomallei MSHR346 fels-1 prophage domain protein YP_002896311.1 1538080 D 536230 CDS YP_002896312.1 237811861 7889912 complement(1538482..1538817) 1 NC_012695.1 hypothetical protein 1538817 7889912 GBP346_A1601 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896312.1 1538482 R 536230 CDS YP_002896313.1 237811862 7890795 1538865..1539056 1 NC_012695.1 hypothetical protein 1539056 7890795 GBP346_A1602 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896313.1 1538865 D 536230 CDS YP_002896314.1 237811863 7887330 1539423..1540118 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1540118 7887330 GBP346_A1603 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896314.1 1539423 D 536230 CDS YP_002896315.1 237811864 7888708 1540219..1540350 1 NC_012695.1 hypothetical protein 1540350 7888708 GBP346_A1604 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896315.1 1540219 D 536230 CDS YP_002896316.1 237811865 7889862 1540386..1543754 1 NC_012695.1 identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; hemagluttinin family protein 1543754 7889862 GBP346_A1605 Burkholderia pseudomallei MSHR346 hemagluttinin family protein YP_002896316.1 1540386 D 536230 CDS YP_002896317.1 237811866 7888220 1543835..1544545 1 NC_012695.1 identified by match to protein family HMM PF00691; outer membrane protein, OmpA family 1544545 7888220 GBP346_A1606 Burkholderia pseudomallei MSHR346 outer membrane protein, OmpA family YP_002896317.1 1543835 D 536230 CDS YP_002896318.1 237811867 7888370 1544547..1546076 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain protein 1546076 7888370 GBP346_A1607 Burkholderia pseudomallei MSHR346 TPR domain protein YP_002896318.1 1544547 D 536230 CDS YP_002896319.1 237811868 7888066 1546093..1546437 1 NC_012695.1 identified by match to protein family HMM PF00816; H-NS histone family protein 1546437 7888066 GBP346_A1608 Burkholderia pseudomallei MSHR346 H-NS histone family protein YP_002896319.1 1546093 D 536230 CDS YP_002896320.1 237811869 7889097 complement(1546896..1547129) 1 NC_012695.1 hypothetical protein 1547129 7889097 GBP346_A1609 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896320.1 1546896 R 536230 CDS YP_002896321.1 237811870 7890183 complement(1547175..1547735) 1 NC_012695.1 hypothetical protein 1547735 7890183 GBP346_A1610 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896321.1 1547175 R 536230 CDS YP_002896322.1 237811871 7887351 complement(1547770..1548267) 1 NC_012695.1 hypothetical protein 1548267 7887351 GBP346_A1611 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896322.1 1547770 R 536230 CDS YP_002896323.1 237811872 7889670 complement(1548294..1550870) 1 NC_012695.1 identified by match to protein family HMM PF00652; match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; lectin repeat domain protein 1550870 7889670 GBP346_A1612 Burkholderia pseudomallei MSHR346 lectin repeat domain protein YP_002896323.1 1548294 R 536230 CDS YP_002896324.1 237811873 7887790 complement(1550949..1551182) 1 NC_012695.1 hypothetical protein 1551182 7887790 GBP346_A1613 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896324.1 1550949 R 536230 CDS YP_002896325.1 237811874 7887376 1551227..1552063 1 NC_012695.1 esterase 1552063 7887376 GBP346_A1614 Burkholderia pseudomallei MSHR346 esterase YP_002896325.1 1551227 D 536230 CDS YP_002896326.1 237811875 7890847 complement(1552221..1553225) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; outer membrane efflux protein 1553225 7890847 GBP346_A1615 Burkholderia pseudomallei MSHR346 outer membrane efflux protein YP_002896326.1 1552221 R 536230 CDS YP_002896327.1 237811876 7887982 1553285..1555186 1 NC_012695.1 identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family 1555186 vasA_2 7887982 vasA_2 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002896327.1 1553285 D 536230 CDS YP_002896328.1 237811877 7888850 complement(1555211..1556626) 1 NC_012695.1 hypothetical protein 1556626 7888850 GBP346_A1617 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896328.1 1555211 R 536230 CDS YP_002896329.1 237811878 7890492 complement(1556650..1556916) 1 NC_012695.1 PAAR motif protein 1556916 7890492 GBP346_A1618 Burkholderia pseudomallei MSHR346 PAAR motif protein YP_002896329.1 1556650 R 536230 CDS YP_002896330.1 237811879 7887462 complement(1557176..1557319) 1 NC_012695.1 hypothetical protein 1557319 7887462 GBP346_A1619 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896330.1 1557176 R 536230 CDS YP_002896331.1 237811880 7887007 1557305..1557421 1 NC_012695.1 hypothetical protein 1557421 7887007 GBP346_A1620 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896331.1 1557305 D 536230 CDS YP_002896332.1 237811881 7887754 1557437..1560244 1 NC_012695.1 identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1560244 7887754 GBP346_A1621 Burkholderia pseudomallei MSHR346 Rhs element Vgr protein YP_002896332.1 1557437 D 536230 CDS YP_002896333.1 237811882 7886727 1560247..1561080 1 NC_012695.1 hypothetical protein 1561080 7886727 GBP346_A1622 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896333.1 1560247 D 536230 CDS YP_002896334.1 237811883 7888530 1561217..1561774 1 NC_012695.1 hypothetical protein 1561774 7888530 GBP346_A1623 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896334.1 1561217 D 536230 CDS YP_002896335.1 237811884 7887234 complement(1561802..1561963) 1 NC_012695.1 hypothetical protein 1561963 7887234 GBP346_A1624 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896335.1 1561802 R 536230 CDS YP_002896336.1 237811885 7889647 1562361..1564769 1 NC_012695.1 hypothetical protein 1564769 7889647 GBP346_A1625 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896336.1 1562361 D 536230 CDS YP_002896337.1 237811886 7889121 1564878..1568213 1 NC_012695.1 identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1568213 7889121 GBP346_A1626 Burkholderia pseudomallei MSHR346 Rhs element Vgr protein YP_002896337.1 1564878 D 536230 CDS YP_002896338.1 237811887 7889307 1569121..1569546 1 NC_012695.1 hypothetical protein 1569546 7889307 GBP346_A1627 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896338.1 1569121 D 536230 CDS YP_002896339.1 237811888 7888856 1569685..1569798 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1569798 7888856 GBP346_A1628 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896339.1 1569685 D 536230 CDS YP_002896340.1 237811889 7889733 1569758..1570021 1 NC_012695.1 hypothetical protein 1570021 7889733 GBP346_A1629 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896340.1 1569758 D 536230 CDS YP_002896341.1 237811890 7889018 1570039..1570344 1 NC_012695.1 hypothetical protein 1570344 7889018 GBP346_A1630 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896341.1 1570039 D 536230 CDS YP_002896342.1 237811891 7887606 1570357..1573191 1 NC_012695.1 identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646; match to protein family HMM TIGR03361; Rhs element Vgr protein 1573191 7887606 GBP346_A1631 Burkholderia pseudomallei MSHR346 Rhs element Vgr protein YP_002896342.1 1570357 D 536230 CDS YP_002896343.1 237811892 7889317 1573195..1574211 1 NC_012695.1 hypothetical protein 1574211 7889317 GBP346_A1632 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896343.1 1573195 D 536230 CDS YP_002896344.1 237811893 7889024 1574214..1577237 1 NC_012695.1 hypothetical protein 1577237 7889024 GBP346_A1633 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896344.1 1574214 D 536230 CDS YP_002896345.1 237811894 7887129 complement(1577471..1577659) 1 NC_012695.1 hypothetical protein 1577659 7887129 GBP346_A1634 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896345.1 1577471 R 536230 CDS YP_002896346.1 237811895 7888983 1578187..1578444 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1578444 7888983 GBP346_A1635 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896346.1 1578187 D 536230 CDS YP_002896347.1 237811896 7889399 1579686..1579841 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1579841 7889399 GBP346_A1636 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896347.1 1579686 D 536230 CDS YP_002896348.1 237811897 7888175 complement(1580174..1580317) 1 NC_012695.1 transposase 1580317 7888175 GBP346_A1637 Burkholderia pseudomallei MSHR346 transposase YP_002896348.1 1580174 R 536230 CDS YP_002896349.1 237811898 7888138 complement(1580388..1580624) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1580624 7888138 GBP346_A1638 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896349.1 1580388 R 536230 CDS YP_002896350.1 237811899 7887003 1580667..1580816 1 NC_012695.1 hypothetical protein 1580816 7887003 GBP346_A1639 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896350.1 1580667 D 536230 CDS YP_002896351.1 237811900 7889142 1581098..1581337 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1581337 7889142 GBP346_A1640 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896351.1 1581098 D 536230 CDS YP_002896352.1 237811901 7888008 1581406..1581549 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1581549 7888008 GBP346_A1641 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896352.1 1581406 D 536230 CDS YP_002896353.1 237811902 7890095 1581699..1582271 1 NC_012695.1 transposase 1582271 7890095 GBP346_A1642 Burkholderia pseudomallei MSHR346 transposase YP_002896353.1 1581699 D 536230 CDS YP_002896354.1 237811903 7890033 1582241..1582498 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; Rhs element Vgr protein 1582498 7890033 GBP346_A1643 Burkholderia pseudomallei MSHR346 Rhs element Vgr protein YP_002896354.1 1582241 D 536230 CDS YP_002896355.1 237811904 7890641 complement(1582666..1582791) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1582791 7890641 GBP346_A1644 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896355.1 1582666 R 536230 CDS YP_002896356.1 237811905 7886833 1583776..1584696 1 NC_012695.1 hypothetical protein 1584696 7886833 GBP346_A1645 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896356.1 1583776 D 536230 CDS YP_002896357.1 237811906 7890075 1584956..1586269 1 NC_012695.1 identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transport protein MntH 1586269 7890075 GBP346_A1647 Burkholderia pseudomallei MSHR346 manganese transport protein MntH YP_002896357.1 1584956 D 536230 CDS YP_002896358.1 237811907 7887753 complement(1586250..1586606) 1 NC_012695.1 hypothetical protein 1586606 7887753 GBP346_A1646 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896358.1 1586250 R 536230 CDS YP_002896359.1 237811908 7890099 1586575..1586715 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1586715 7890099 GBP346_A1648 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896359.1 1586575 D 536230 CDS YP_002896360.1 237811909 7887831 1587164..1587433 1 NC_012695.1 hypothetical protein 1587433 7887831 GBP346_A1649 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896360.1 1587164 D 536230 CDS YP_002896361.1 237811910 7887557 complement(1587686..1587967) 1 NC_012695.1 identified by match to protein family HMM PF00816; H-NS histone family protein 1587967 7887557 GBP346_A1650 Burkholderia pseudomallei MSHR346 H-NS histone family protein YP_002896361.1 1587686 R 536230 CDS YP_002896362.1 237811911 7889255 complement(1587967..1588161) 1 NC_012695.1 hypothetical protein 1588161 7889255 GBP346_A1651 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896362.1 1587967 R 536230 CDS YP_002896363.1 237811912 7888743 complement(1588435..1589418) 1 NC_012695.1 identified by match to protein family HMM PF04909; amidohydrolase family protein 1589418 7888743 GBP346_A1652 Burkholderia pseudomallei MSHR346 amidohydrolase family protein YP_002896363.1 1588435 R 536230 CDS YP_002896364.1 237811913 7890608 complement(1589463..1590800) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; probable 4-methylmuconolactone transporter 1590800 7890608 GBP346_A1653 Burkholderia pseudomallei MSHR346 probable 4-methylmuconolactone transporter YP_002896364.1 1589463 R 536230 CDS YP_002896365.1 237811914 7890162 1591035..1591163 1 NC_012695.1 hypothetical protein 1591163 7890162 GBP346_A1654 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896365.1 1591035 D 536230 CDS YP_002896366.1 237811915 7887037 1591166..1592059 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1592059 7887037 GBP346_A1655 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896366.1 1591166 D 536230 CDS YP_002896367.1 237811916 7889035 complement(1592171..1592341) 1 NC_012695.1 hypothetical protein 1592341 7889035 GBP346_A1656 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896367.1 1592171 R 536230 CDS YP_002896368.1 237811917 7889720 1592371..1592592 1 NC_012695.1 hypothetical protein 1592592 7889720 GBP346_A1657 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896368.1 1592371 D 536230 CDS YP_002896369.1 237811918 7890686 1592678..1592866 1 NC_012695.1 hypothetical protein 1592866 7890686 GBP346_A1658 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896369.1 1592678 D 536230 CDS YP_002896370.1 237811919 7887182 1592853..1593398 1 NC_012695.1 identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1593398 7887182 GBP346_A1659 Burkholderia pseudomallei MSHR346 Spore Coat Protein U domain protein YP_002896370.1 1592853 D 536230 CDS YP_002896371.1 237811920 7886829 1593451..1594011 1 NC_012695.1 identified by match to protein family HMM PF05229; type I pilus protein 1594011 7886829 GBP346_A1660 Burkholderia pseudomallei MSHR346 type I pilus protein YP_002896371.1 1593451 D 536230 CDS YP_002896372.1 237811921 7890575 1594088..1594612 1 NC_012695.1 identified by match to protein family HMM PF05229; Spore Coat Protein U domain protein 1594612 7890575 GBP346_A1661 Burkholderia pseudomallei MSHR346 Spore Coat Protein U domain protein YP_002896372.1 1594088 D 536230 CDS YP_002896373.1 237811922 7887071 1594630..1595469 1 NC_012695.1 fimbrial chaperone protein 1595469 7887071 GBP346_A1662 Burkholderia pseudomallei MSHR346 fimbrial chaperone protein YP_002896373.1 1594630 D 536230 CDS YP_002896374.1 237811923 7887906 1595514..1597925 1 NC_012695.1 identified by match to protein family HMM PF00577; fimbrial usher protein 1597925 7887906 GBP346_A1663 Burkholderia pseudomallei MSHR346 fimbrial usher protein YP_002896374.1 1595514 D 536230 CDS YP_002896375.1 237811924 7889763 1597941..1598906 1 NC_012695.1 identified by match to protein family HMM PF05229; type 1 pili protein CsuE 1598906 7889763 GBP346_A1664 Burkholderia pseudomallei MSHR346 type 1 pili protein CsuE YP_002896375.1 1597941 D 536230 CDS YP_002896376.1 237811925 7886824 1599317..1601398 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; response regulator/sensor histidine kinase 1601398 7886824 GBP346_A1665 Burkholderia pseudomallei MSHR346 response regulator/sensor histidine kinase YP_002896376.1 1599317 D 536230 CDS YP_002896377.1 237811926 7890743 1601399..1602031 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; DNA-binding response regulator 1602031 7890743 GBP346_A1666 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896377.1 1601399 D 536230 CDS YP_002896378.1 237811927 7888944 complement(1602335..1604035) 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor 1604035 7888944 GBP346_A1667 Burkholderia pseudomallei MSHR346 efflux transporter, outer membrane factor YP_002896378.1 1602335 R 536230 CDS YP_002896379.1 237811928 7887403 complement(1604037..1605656) 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug:H+ antiporter-2 1605656 7887403 GBP346_A1668 Burkholderia pseudomallei MSHR346 drug:H+ antiporter-2 YP_002896379.1 1604037 R 536230 CDS YP_002896380.1 237811929 7888628 complement(1605653..1605841) 1 NC_012695.1 hypothetical protein 1605841 7888628 GBP346_A1669 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896380.1 1605653 R 536230 CDS YP_002896381.1 237811930 7888816 complement(1605838..1607025) 1 NC_012695.1 identified by match to protein family HMM PF00529; HlyD family secretion protein 1607025 7888816 GBP346_A1670 Burkholderia pseudomallei MSHR346 HlyD family secretion protein YP_002896381.1 1605838 R 536230 CDS YP_002896382.1 237811931 7890886 complement(1607265..1607585) 1 NC_012695.1 hypothetical protein 1607585 7890886 GBP346_A1671 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896382.1 1607265 R 536230 CDS YP_002896383.1 237811932 7888921 complement(1607649..1608842) 1 NC_012695.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 1608842 7888921 GBP346_A1672 Burkholderia pseudomallei MSHR346 trans-2-enoyl-CoA reductase YP_002896383.1 1607649 R 536230 CDS YP_002896384.1 237811933 7886930 complement(1609040..1610623) 1 NC_012695.1 identified by match to protein family HMM PF04185; match to protein family HMM TIGR03397; acid phosphatase AcpA 1610623 acpA_1 7886930 acpA_1 Burkholderia pseudomallei MSHR346 acid phosphatase AcpA YP_002896384.1 1609040 R 536230 CDS YP_002896385.1 237811934 7887106 1610857..1612272 1 NC_012695.1 identified by match to protein family HMM PF03150; di-heme cytochrome c peroxidase family protein 1612272 7887106 GBP346_A1674 Burkholderia pseudomallei MSHR346 di-heme cytochrome c peroxidase family protein YP_002896385.1 1610857 D 536230 CDS YP_002896386.1 237811935 7888631 complement(1612316..1613176) 1 NC_012695.1 hypothetical protein 1613176 7888631 GBP346_A1675 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896386.1 1612316 R 536230 CDS YP_002896387.1 237811936 7890110 1613278..1615377 1 NC_012695.1 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; glycosyl hydrolase, family 3 1615377 7890110 GBP346_A1677 Burkholderia pseudomallei MSHR346 glycosyl hydrolase, family 3 YP_002896387.1 1613278 D 536230 CDS YP_002896388.1 237811937 7888142 complement(1615347..1615544) 1 NC_012695.1 hypothetical protein 1615544 7888142 GBP346_A1676 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896388.1 1615347 R 536230 CDS YP_002896389.1 237811938 7887716 complement(1615569..1615745) 1 NC_012695.1 hypothetical protein 1615745 7887716 GBP346_A1678 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896389.1 1615569 R 536230 CDS YP_002896390.1 237811939 7886915 1615707..1616051 1 NC_012695.1 hypothetical protein 1616051 7886915 GBP346_A1679 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896390.1 1615707 D 536230 CDS YP_002896391.1 237811940 7890704 1616070..1616552 1 NC_012695.1 identified by match to protein family HMM PF00293; hydrolase, nudix family 1616552 7890704 GBP346_A1680 Burkholderia pseudomallei MSHR346 hydrolase, nudix family YP_002896391.1 1616070 D 536230 CDS YP_002896392.1 237811941 7888878 complement(1616896..1618902) 1 NC_012695.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1618902 glnS 7888878 glnS Burkholderia pseudomallei MSHR346 glutaminyl-tRNA synthetase YP_002896392.1 1616896 R 536230 CDS YP_002896393.1 237811942 7889742 1618885..1619094 1 NC_012695.1 putative lipoprotein 1619094 7889742 GBP346_A1682 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896393.1 1618885 D 536230 CDS YP_002896394.1 237811943 7888027 complement(1619423..1621048) 1 NC_012695.1 identified by match to protein family HMM PF02515; caib/baif family protein 1621048 7888027 GBP346_A1683 Burkholderia pseudomallei MSHR346 caib/baif family protein YP_002896394.1 1619423 R 536230 CDS YP_002896395.1 237811944 7890917 1621267..1623891 1 NC_012695.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1623891 alaS 7890917 alaS Burkholderia pseudomallei MSHR346 alanyl-tRNA synthetase YP_002896395.1 1621267 D 536230 CDS YP_002896396.1 237811945 7888942 complement(1624405..1625430) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1625430 7888942 GBP346_A1685 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896396.1 1624405 R 536230 CDS YP_002896397.1 237811946 7889079 1625493..1627256 1 NC_012695.1 identified by match to protein family HMM PF06779; match to protein family HMM PF07690; permease, major facilitator superfamily 1627256 7889079 GBP346_A1686 Burkholderia pseudomallei MSHR346 permease, major facilitator superfamily YP_002896397.1 1625493 D 536230 CDS YP_002896398.1 237811947 7888681 1627588..1629144 1 NC_012695.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; peptidase s1, chymotrypsin:pdz/dhr/glgf 1629144 7888681 GBP346_A1687 Burkholderia pseudomallei MSHR346 peptidase s1, chymotrypsin:pdz/dhr/glgf YP_002896398.1 1627588 D 536230 CDS YP_002896399.1 237811948 7886723 complement(1629361..1630038) 1 NC_012695.1 hypothetical protein 1630038 7886723 GBP346_A1688 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896399.1 1629361 R 536230 CDS YP_002896400.1 237811949 7888601 1630252..1630881 1 NC_012695.1 identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family 1630881 7888601 GBP346_A1689 Burkholderia pseudomallei MSHR346 pyrophosphatase, MutT/nudix family YP_002896400.1 1630252 D 536230 CDS YP_002896401.1 237811950 7886825 complement(1630981..1631316) 1 NC_012695.1 identified by match to protein family HMM PF01906; hypothetical protein 1631316 7886825 GBP346_A1690 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896401.1 1630981 R 536230 CDS YP_002896402.1 237811951 7888119 1631533..1632681 1 NC_012695.1 identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-containing family protein 1632681 7888119 GBP346_A1691 Burkholderia pseudomallei MSHR346 alcohol dehydrogenase, iron-containing family protein YP_002896402.1 1631533 D 536230 CDS YP_002896403.1 237811952 7889355 1632678..1633031 1 NC_012695.1 hypothetical protein 1633031 7889355 GBP346_A1692 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896403.1 1632678 D 536230 CDS YP_002896404.1 237811953 7889039 1632827..1633381 1 NC_012695.1 identified by match to protein family HMM PF03061; thioesterase family protein 1633381 7889039 GBP346_A1693 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002896404.1 1632827 D 536230 CDS YP_002896405.1 237811954 7887795 1633386..1634321 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, permease protein 1634321 7887795 GBP346_A1694 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002896405.1 1633386 D 536230 CDS YP_002896406.1 237811955 7889426 1634350..1636635 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02653; ABC transporter, permease/ATP-binding protein 1636635 7889426 GBP346_A1695 Burkholderia pseudomallei MSHR346 ABC transporter, permease/ATP-binding protein YP_002896406.1 1634350 D 536230 CDS YP_002896407.1 237811956 7887160 1636632..1637336 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1637336 7887160 GBP346_A1696 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002896407.1 1636632 D 536230 CDS YP_002896408.1 237811957 7889157 complement(1637453..1638256) 1 NC_012695.1 identified by match to protein family HMM PF06845; protein IolB 1638256 7889157 GBP346_A1697 Burkholderia pseudomallei MSHR346 protein IolB YP_002896408.1 1637453 R 536230 CDS YP_002896409.1 237811958 7888251 complement(1638256..1639176) 1 NC_012695.1 identified by match to protein family HMM PF01261; IolE protein 1639176 7888251 GBP346_A1698 Burkholderia pseudomallei MSHR346 IolE protein YP_002896409.1 1638256 R 536230 CDS YP_002896410.1 237811959 7890005 complement(1639173..1641158) 1 NC_012695.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; IolD protein 1641158 7890005 GBP346_A1699 Burkholderia pseudomallei MSHR346 IolD protein YP_002896410.1 1639173 R 536230 CDS YP_002896411.1 237811960 7888657 complement(1641169..1643169) 1 NC_012695.1 identified by match to protein family HMM PF00294; IolC protein 1643169 7888657 GBP346_A1700 Burkholderia pseudomallei MSHR346 IolC protein YP_002896411.1 1641169 R 536230 CDS YP_002896412.1 237811961 7890109 complement(1643183..1643983) 1 NC_012695.1 identified by match to protein family HMM PF00005; ribose import ATP-binding protein RbsA 2 1643983 7890109 GBP346_A1701 Burkholderia pseudomallei MSHR346 ribose import ATP-binding protein RbsA 2 YP_002896412.1 1643183 R 536230 CDS YP_002896413.1 237811962 7889441 complement(1643996..1645141) 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, carbohydrate uptake transporter-2 1645141 7889441 GBP346_A1702 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-2 YP_002896413.1 1643996 R 536230 CDS YP_002896414.1 237811963 7887227 complement(1645242..1646291) 1 NC_012695.1 ABC transporter, carbohydrate uptake transporter-2 1646291 7887227 GBP346_A1703 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-2 YP_002896414.1 1645242 R 536230 CDS YP_002896415.1 237811964 7888115 1646536..1647417 1 NC_012695.1 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; SIS domain protein 1647417 7888115 GBP346_A1704 Burkholderia pseudomallei MSHR346 SIS domain protein YP_002896415.1 1646536 D 536230 CDS YP_002896416.1 237811965 7886895 1647410..1648429 1 NC_012695.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; inositol 2-dehydrogenase 1648429 7886895 GBP346_A1705 Burkholderia pseudomallei MSHR346 inositol 2-dehydrogenase YP_002896416.1 1647410 D 536230 CDS YP_002896417.1 237811966 7888485 1648442..1649479 1 NC_012695.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; oxidoreductase 1649479 7888485 GBP346_A1706 Burkholderia pseudomallei MSHR346 oxidoreductase YP_002896417.1 1648442 D 536230 CDS YP_002896418.1 237811967 7887649 1649644..1649874 1 NC_012695.1 identified by match to protein family HMM PF01206; hypothetical protein 1649874 7887649 GBP346_A1707 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896418.1 1649644 D 536230 CDS YP_002896419.1 237811968 7887501 1650150..1650536 1 NC_012695.1 hypothetical protein 1650536 7887501 GBP346_A1708 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896419.1 1650150 D 536230 CDS YP_002896420.1 237811969 7887665 1650840..1651568 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1651568 7887665 GBP346_A1709 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896420.1 1650840 D 536230 CDS YP_002896421.1 237811970 7888784 1651583..1652929 1 NC_012695.1 identified by match to protein family HMM PF01476; LysM domain protein 1652929 7888784 GBP346_A1710 Burkholderia pseudomallei MSHR346 LysM domain protein YP_002896421.1 1651583 D 536230 CDS YP_002896422.1 237811971 7887096 1652940..1655333 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF05226; sensory domain-containing histidine kinase 1655333 7887096 GBP346_A1711 Burkholderia pseudomallei MSHR346 sensory domain-containing histidine kinase YP_002896422.1 1652940 D 536230 CDS YP_002896423.1 237811972 7887383 1655431..1656039 1 NC_012695.1 hypothetical protein 1656039 7887383 GBP346_A1712 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896423.1 1655431 D 536230 CDS YP_002896424.1 237811973 7887310 complement(1656100..1656981) 1 NC_012695.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 1656981 galU_1 7887310 galU_1 Burkholderia pseudomallei MSHR346 UTP-glucose-1-phosphate uridylyltransferase YP_002896424.1 1656100 R 536230 CDS YP_002896425.1 237811974 7886874 complement(1657068..1659935) 1 NC_012695.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1659935 valS 7886874 valS Burkholderia pseudomallei MSHR346 valyl-tRNA synthetase YP_002896425.1 1657068 R 536230 CDS YP_002896426.1 237811975 7887604 1660075..1662438 1 NC_012695.1 identified by match to protein family HMM PF00580; DNA helicase II 1662438 7887604 GBP346_A1715 Burkholderia pseudomallei MSHR346 DNA helicase II YP_002896426.1 1660075 D 536230 CDS YP_002896427.1 237811976 7888447 1662435..1663223 1 NC_012695.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1663223 mtnN 7888447 mtnN Burkholderia pseudomallei MSHR346 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002896427.1 1662435 D 536230 CDS YP_002896428.1 237811977 7886690 complement(1663657..1664910) 1 NC_012695.1 identified by match to protein family HMM PF07690; fosmidomycin resistance protein 1664910 7886690 GBP346_A1717 Burkholderia pseudomallei MSHR346 fosmidomycin resistance protein YP_002896428.1 1663657 R 536230 CDS YP_002896429.1 237811978 7889638 1664995..1666938 1 NC_012695.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1666938 7889638 GBP346_A1719 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002896429.1 1664995 D 536230 CDS YP_002896430.1 237811979 7890078 complement(1666911..1667210) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1667210 7890078 GBP346_A1718 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896430.1 1666911 R 536230 CDS YP_002896431.1 237811980 7889936 complement(1667289..1668170) 1 NC_012695.1 identified by match to protein family HMM PF00529; putative fusaric acid resistance protein 1668170 7889936 GBP346_A1720 Burkholderia pseudomallei MSHR346 putative fusaric acid resistance protein YP_002896431.1 1667289 R 536230 CDS YP_002896432.1 237811981 7889368 complement(1668184..1668387) 1 NC_012695.1 identified by match to protein family HMM PF07869; hypothetical protein 1668387 7889368 GBP346_A1721 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896432.1 1668184 R 536230 CDS YP_002896433.1 237811982 7886985 complement(1668384..1670585) 1 NC_012695.1 identified by match to protein family HMM PF04632; fusaric acid resistance domain protein 1670585 7886985 GBP346_A1722 Burkholderia pseudomallei MSHR346 fusaric acid resistance domain protein YP_002896433.1 1668384 R 536230 CDS YP_002896434.1 237811983 7888597 complement(1670602..1672461) 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, outer membrane lipoprotein, NodT family protein 1672461 7888597 GBP346_A1723 Burkholderia pseudomallei MSHR346 RND efflux system, outer membrane lipoprotein, NodT family protein YP_002896434.1 1670602 R 536230 CDS YP_002896435.1 237811984 7886707 1672538..1673479 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1673479 7886707 GBP346_A1724 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896435.1 1672538 D 536230 CDS YP_002896436.1 237811985 7890196 1673618..1673791 1 NC_012695.1 hypothetical protein 1673791 7890196 GBP346_A1725 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896436.1 1673618 D 536230 CDS YP_002896437.1 237811986 7887369 complement(1673828..1674799) 1 NC_012695.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1674799 7887369 GBP346_A1726 Burkholderia pseudomallei MSHR346 Ser/Thr protein phosphatase family protein YP_002896437.1 1673828 R 536230 CDS YP_002896438.1 237811987 7888616 complement(1674831..1676252) 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidoreductase, FAD-binding 1676252 7888616 GBP346_A1727 Burkholderia pseudomallei MSHR346 oxidoreductase, FAD-binding YP_002896438.1 1674831 R 536230 CDS YP_002896439.1 237811988 7889036 complement(1676287..1676736) 1 NC_012695.1 hypothetical protein 1676736 7889036 GBP346_A1728 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896439.1 1676287 R 536230 CDS YP_002896440.1 237811989 7888600 complement(1676733..1677341) 1 NC_012695.1 identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755; NAD(P)H:quinone oxidoreductase, type IV 1677341 wrbA 7888600 wrbA Burkholderia pseudomallei MSHR346 NAD(P)H:quinone oxidoreductase, type IV YP_002896440.1 1676733 R 536230 CDS YP_002896441.1 237811990 7888532 1677447..1678760 1 NC_012695.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; ribonuclease BN 1678760 7888532 GBP346_A1730 Burkholderia pseudomallei MSHR346 ribonuclease BN YP_002896441.1 1677447 D 536230 CDS YP_002896442.1 237811991 7889231 complement(1678950..1679270) 1 NC_012695.1 membrane protein 1679270 7889231 GBP346_A1731 Burkholderia pseudomallei MSHR346 membrane protein YP_002896442.1 1678950 R 536230 CDS YP_002896443.1 237811992 7886772 complement(1679355..1679474) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1679474 7886772 GBP346_A1732 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896443.1 1679355 R 536230 CDS YP_002896444.1 237811993 7890559 1679487..1679951 1 NC_012695.1 identified by match to protein family HMM PF00571; CBS domain protein 1679951 7890559 GBP346_A1733 Burkholderia pseudomallei MSHR346 CBS domain protein YP_002896444.1 1679487 D 536230 CDS YP_002896445.1 237811994 7890486 1680051..1681985 1 NC_012695.1 identified by match to protein family HMM PF01553; match to protein family HMM PF07690; transporter, major facilitator family 1681985 7890486 GBP346_A1734 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002896445.1 1680051 D 536230 CDS YP_002896446.1 237811995 7889726 1682069..1683460 1 NC_012695.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1683460 aroC 7889726 aroC Burkholderia pseudomallei MSHR346 chorismate synthase YP_002896446.1 1682069 D 536230 CDS YP_002896447.1 237811996 7890325 1683457..1683651 1 NC_012695.1 hypothetical protein 1683651 7890325 GBP346_A1737 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896447.1 1683457 D 536230 CDS YP_002896448.1 237811997 7887186 complement(1683636..1685381) 1 NC_012695.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF05187; electron-transferring-flavoprotein dehydrogenase 1685381 7887186 GBP346_A1736 Burkholderia pseudomallei MSHR346 electron-transferring-flavoprotein dehydrogenase YP_002896448.1 1683636 R 536230 CDS YP_002896449.1 237811998 7890694 1685490..1686269 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase 1686269 7890694 GBP346_A1738 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002896449.1 1685490 D 536230 CDS YP_002896450.1 237811999 7887670 1686314..1686745 1 NC_012695.1 identified by match to protein family HMM PF03061; thioesterase family protein 1686745 7887670 GBP346_A1739 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002896450.1 1686314 D 536230 CDS YP_002896451.1 237812000 7888694 complement(1687123..1688196) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1688196 7888694 GBP346_A1740 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896451.1 1687123 R 536230 CDS YP_002896452.1 237812001 7887338 1688422..1688658 1 NC_012695.1 hypothetical protein 1688658 7887338 GBP346_A1741 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896452.1 1688422 D 536230 CDS YP_002896453.1 237812002 7890469 complement(1688709..1689929) 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 1689929 7890469 GBP346_A1742 Burkholderia pseudomallei MSHR346 transposase YP_002896453.1 1688709 R 536230 CDS YP_002896454.1 237812003 7888783 complement(1690438..1691970) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; xylann 1,4-beta-xylosidase 1691970 7888783 GBP346_A1743 Burkholderia pseudomallei MSHR346 xylann 1,4-beta-xylosidase YP_002896454.1 1690438 R 536230 CDS YP_002896455.1 237812004 7887314 1692083..1692313 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1692313 7887314 GBP346_A1744 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896455.1 1692083 D 536230 CDS YP_002896456.1 237812005 7887208 complement(1692542..1693087) 1 NC_012695.1 identified by match to protein family HMM PF00196; match to protein family HMM PF08448; transcriptional regulator, LuxR family 1693087 7887208 GBP346_A1745 Burkholderia pseudomallei MSHR346 transcriptional regulator, LuxR family YP_002896456.1 1692542 R 536230 CDS YP_002896457.1 237812006 7886798 1693340..1694044 1 NC_012695.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; 3-oxoacid CoA-transferase, A subunit family 1694044 7886798 GBP346_A1746 Burkholderia pseudomallei MSHR346 3-oxoacid CoA-transferase, A subunit family YP_002896457.1 1693340 D 536230 CDS YP_002896458.1 237812007 7890788 1694046..1694687 1 NC_012695.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; succinyl-coa:3-ketoacid-coenzyme a transferase subunit b (succinyl coa:3-oxoacid coa-transferase) (oxct b) 1694687 7890788 GBP346_A1747 Burkholderia pseudomallei MSHR346 succinyl-coa:3-ketoacid-coenzyme a transferase subunit b (succinyl coa:3-oxoacid coa-transferase) (oxct b) YP_002896458.1 1694046 D 536230 CDS YP_002896459.1 237812008 7890298 complement(1695104..1695826) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase 1695826 7890298 GBP346_A1748 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002896459.1 1695104 R 536230 CDS YP_002896460.1 237812009 7890166 complement(1695870..1696970) 1 NC_012695.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 1696970 7890166 GBP346_A1749 Burkholderia pseudomallei MSHR346 polysaccharide deacetylase family protein YP_002896460.1 1695870 R 536230 CDS YP_002896461.1 237812010 7889412 complement(1696985..1697542) 1 NC_012695.1 identified by match to protein family HMM PF07366; hypothetical protein 1697542 7889412 GBP346_A1750 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896461.1 1696985 R 536230 CDS YP_002896462.1 237812011 7887722 1697634..1698635 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1698635 7887722 GBP346_A1751 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896462.1 1697634 D 536230 CDS YP_002896463.1 237812012 7890803 1699626..1700867 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 1700867 7890803 GBP346_A1752 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002896463.1 1699626 D 536230 CDS YP_002896464.1 237812013 7888639 1700941..1701294 1 NC_012695.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP family 1701294 7888639 GBP346_A1753 Burkholderia pseudomallei MSHR346 endoribonuclease L-PSP family YP_002896464.1 1700941 D 536230 CDS YP_002896465.1 237812014 7886754 1701339..1703576 1 NC_012695.1 identified by match to protein family HMM PF01842; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP diphosphokinase 1703576 relA 7886754 relA Burkholderia pseudomallei MSHR346 GTP diphosphokinase YP_002896465.1 1701339 D 536230 CDS YP_002896466.1 237812015 7889205 complement(1703836..1703991) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1703991 7889205 GBP346_A1756 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896466.1 1703836 R 536230 CDS YP_002896467.1 237812016 7890905 1704007..1705914 1 NC_012695.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1705914 thrS 7890905 thrS Burkholderia pseudomallei MSHR346 threonyl-tRNA synthetase YP_002896467.1 1704007 D 536230 CDS YP_002896468.1 237812017 7889554 1706018..1706488 1 NC_012695.1 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 1706488 infC 7889554 infC Burkholderia pseudomallei MSHR346 translation initiation factor IF-3 YP_002896468.1 1706018 D 536230 CDS YP_002896469.1 237812018 7888487 1706681..1706878 1 NC_012695.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 1706878 rpmI 7888487 rpmI Burkholderia pseudomallei MSHR346 50S ribosomal protein L35 YP_002896469.1 1706681 D 536230 CDS YP_002896470.1 237812019 7890235 1706909..1707268 1 NC_012695.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1707268 rplT 7890235 rplT Burkholderia pseudomallei MSHR346 50S ribosomal protein L20 YP_002896470.1 1706909 D 536230 CDS YP_002896471.1 237812020 7888379 1707399..1708430 1 NC_012695.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1708430 pheS 7888379 pheS Burkholderia pseudomallei MSHR346 phenylalanyl-tRNA synthetase subunit alpha YP_002896471.1 1707399 D 536230 CDS YP_002896472.1 237812021 7888408 1708518..1710950 1 NC_012695.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1710950 pheT 7888408 pheT Burkholderia pseudomallei MSHR346 phenylalanyl-tRNA synthetase subunit beta YP_002896472.1 1708518 D 536230 CDS YP_002896473.1 237812022 7887949 1711023..1711427 1 NC_012695.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1711427 ihfA 7887949 ihfA Burkholderia pseudomallei MSHR346 integration host factor subunit alpha YP_002896473.1 1711023 D 536230 CDS YP_002896474.1 237812023 7888236 1711486..1711890 1 NC_012695.1 identified by match to protein family HMM PF00376; transcriptional regulator, MerR family 1711890 7888236 GBP346_A1764 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family YP_002896474.1 1711486 D 536230 CDS YP_002896475.1 237812024 7888107 complement(1712012..1714165) 1 NC_012695.1 identified by match to protein family HMM PF05665; hypothetical protein 1714165 7888107 GBP346_A1765 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896475.1 1712012 R 536230 CDS YP_002896476.1 237812025 7889420 complement(1714632..1715816) 1 NC_012695.1 identified by match to protein family HMM PF01757; acyltransferase 1715816 7889420 GBP346_A1766 Burkholderia pseudomallei MSHR346 acyltransferase YP_002896476.1 1714632 R 536230 CDS YP_002896477.1 237812026 7889201 complement(1716525..1717727) 1 NC_012695.1 Gly/Ala/Ser-rich lipoprotein 1717727 7889201 GBP346_A1768 Burkholderia pseudomallei MSHR346 Gly/Ala/Ser-rich lipoprotein YP_002896477.1 1716525 R 536230 CDS YP_002896478.1 237812027 7890004 complement(1717738..1718229) 1 NC_012695.1 hypothetical protein 1718229 7890004 GBP346_A1769 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896478.1 1717738 R 536230 CDS YP_002896479.1 237812028 7888575 complement(1718270..1718401) 1 NC_012695.1 hypothetical protein 1718401 7888575 GBP346_A1770 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896479.1 1718270 R 536230 CDS YP_002896480.1 237812029 7888095 1718579..1719784 1 NC_012695.1 NlpBDapX family lipoprotein 1719784 7888095 GBP346_A1771 Burkholderia pseudomallei MSHR346 NlpBDapX family lipoprotein YP_002896480.1 1718579 D 536230 CDS YP_002896481.1 237812030 7887133 1720348..1720638 1 NC_012695.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase family protein 1720638 7887133 GBP346_A1772 Burkholderia pseudomallei MSHR346 antibiotic biosynthesis monooxygenase family protein YP_002896481.1 1720348 D 536230 CDS YP_002896482.1 237812031 7888188 complement(1720688..1720945) 1 NC_012695.1 hypothetical protein 1720945 7888188 GBP346_A1773 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896482.1 1720688 R 536230 CDS YP_002896483.1 237812032 7889861 complement(1721094..1721372) 1 NC_012695.1 hypothetical protein 1721372 7889861 GBP346_A1774 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896483.1 1721094 R 536230 CDS YP_002896484.1 237812033 7889334 complement(1721611..1722333) 1 NC_012695.1 identified by match to protein family HMM PF02698; hypothetical protein 1722333 7889334 GBP346_A1775 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896484.1 1721611 R 536230 CDS YP_002896485.1 237812034 7887611 1722558..1722851 1 NC_012695.1 hypothetical protein 1722851 7887611 GBP346_A1776 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896485.1 1722558 D 536230 CDS YP_002896486.1 237812035 7887446 1723016..1723186 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1723186 7887446 GBP346_A1777 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896486.1 1723016 D 536230 CDS YP_002896487.1 237812036 7888664 complement(1723473..1723871) 1 NC_012695.1 hypothetical protein 1723871 7888664 GBP346_A1778 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896487.1 1723473 R 536230 CDS YP_002896488.1 237812037 7889480 1724293..1725195 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1725195 7889480 GBP346_A1779 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896488.1 1724293 D 536230 CDS YP_002896489.1 237812038 7888800 1725614..1726981 1 NC_012695.1 identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 1726981 7888800 GBP346_A1780 Burkholderia pseudomallei MSHR346 segregation and condensation protein B YP_002896489.1 1725614 D 536230 CDS YP_002896490.1 237812039 7888124 1727045..1728709 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 1728709 7888124 GBP346_A1781 Burkholderia pseudomallei MSHR346 RNA pseudouridine synthase family protein YP_002896490.1 1727045 D 536230 CDS YP_002896491.1 237812040 7887162 1729014..1729475 1 NC_012695.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1729475 7887162 GBP346_A1782 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896491.1 1729014 D 536230 CDS YP_002896492.1 237812041 7889430 1729472..1730947 1 NC_012695.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1730947 nusA 7889430 nusA Burkholderia pseudomallei MSHR346 transcription elongation factor NusA YP_002896492.1 1729472 D 536230 CDS YP_002896493.1 237812042 7889361 1731039..1733966 1 NC_012695.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1733966 infB 7889361 infB Burkholderia pseudomallei MSHR346 translation initiation factor IF-2 YP_002896493.1 1731039 D 536230 CDS YP_002896494.1 237812043 7888660 1734024..1734440 1 NC_012695.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1734440 rbfA 7888660 rbfA Burkholderia pseudomallei MSHR346 ribosome-binding factor A YP_002896494.1 1734024 D 536230 CDS YP_002896495.1 237812044 7889529 1734494..1735402 1 NC_012695.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1735402 truB 7889529 truB Burkholderia pseudomallei MSHR346 tRNA pseudouridine synthase B YP_002896495.1 1734494 D 536230 CDS YP_002896496.1 237812045 7890726 complement(1735673..1737232) 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; multidrug resistance protein Y 1737232 7890726 GBP346_A1787 Burkholderia pseudomallei MSHR346 multidrug resistance protein Y YP_002896496.1 1735673 R 536230 CDS YP_002896497.1 237812046 7889227 complement(1737255..1738490) 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR00998; multidrug resistance protein A 1738490 7889227 GBP346_A1788 Burkholderia pseudomallei MSHR346 multidrug resistance protein A YP_002896497.1 1737255 R 536230 CDS YP_002896498.1 237812047 7889011 complement(1738558..1740054) 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor lipoprotein, NodT family 1740054 7889011 GBP346_A1789 Burkholderia pseudomallei MSHR346 efflux transporter, outer membrane factor lipoprotein, NodT family YP_002896498.1 1738558 R 536230 CDS YP_002896499.1 237812048 7890428 complement(1740154..1740651) 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 1740651 7890428 GBP346_A1790 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002896499.1 1740154 R 536230 CDS YP_002896500.1 237812049 7888711 complement(1740851..1740991) 1 NC_012695.1 hypothetical protein 1740991 7888711 GBP346_A1791 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896500.1 1740851 R 536230 CDS YP_002896501.1 237812050 7890035 1740944..1742770 1 NC_012695.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA/BipA 1742770 typA 7890035 typA Burkholderia pseudomallei MSHR346 GTP-binding protein TypA/BipA YP_002896501.1 1740944 D 536230 CDS YP_002896502.1 237812051 7886790 1743109..1745973 1 NC_012695.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1745973 sucA 7886790 sucA Burkholderia pseudomallei MSHR346 2-oxoglutarate dehydrogenase E1 component YP_002896502.1 1743109 D 536230 CDS YP_002896503.1 237812052 7887197 1746108..1747385 1 NC_012695.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1747385 sucB 7887197 sucB Burkholderia pseudomallei MSHR346 dihydrolipoamide succinyltransferase YP_002896503.1 1746108 D 536230 CDS YP_002896504.1 237812053 7888062 1747485..1748915 1 NC_012695.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1748915 lpdA_1 7888062 lpdA_1 Burkholderia pseudomallei MSHR346 dihydrolipoamide dehydrogenase YP_002896504.1 1747485 D 536230 CDS YP_002896505.1 237812054 7888907 1749019..1750119 1 NC_012695.1 identified by match to protein family HMM PF03969; ATPase, AFG1 family 1750119 7888907 GBP346_A1796 Burkholderia pseudomallei MSHR346 ATPase, AFG1 family YP_002896505.1 1749019 D 536230 CDS YP_002896506.1 237812055 7889694 1750314..1750724 1 NC_012695.1 hypothetical protein 1750724 7889694 GBP346_A1797 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896506.1 1750314 D 536230 CDS YP_002896507.1 237812056 7890393 complement(1750961..1751422) 1 NC_012695.1 putative lipoprotein 1751422 7890393 GBP346_A1798 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896507.1 1750961 R 536230 CDS YP_002896508.1 237812057 7889510 1751445..1751669 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1751669 7889510 GBP346_A1800 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896508.1 1751445 D 536230 CDS YP_002896509.1 237812058 7888435 complement(1751663..1753318) 1 NC_012695.1 identified by match to protein family HMM PF08479; polypeptide-transport-associated domain protein ShlB-type 1753318 7888435 GBP346_A1799 Burkholderia pseudomallei MSHR346 polypeptide-transport-associated domain protein ShlB-type YP_002896509.1 1751663 R 536230 CDS YP_002896510.1 237812059 7887960 complement(1753493..1754749) 1 NC_012695.1 collagen triple helix repeat protein 1754749 7887960 GBP346_A1801 Burkholderia pseudomallei MSHR346 collagen triple helix repeat protein YP_002896510.1 1753493 R 536230 CDS YP_002896511.1 237812060 7887582 complement(1754799..1756349) 1 NC_012695.1 collagen triple helix repeat protein 1756349 7887582 GBP346_A1802 Burkholderia pseudomallei MSHR346 collagen triple helix repeat protein YP_002896511.1 1754799 R 536230 CDS YP_002896512.1 237812061 7888721 1756315..1756629 1 NC_012695.1 hypothetical protein 1756629 7888721 GBP346_A1803 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896512.1 1756315 D 536230 CDS YP_002896513.1 237812062 7890639 1756835..1756972 1 NC_012695.1 hypothetical protein 1756972 7890639 GBP346_A1804 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896513.1 1756835 D 536230 CDS YP_002896514.1 237812063 7888486 1757053..1757250 1 NC_012695.1 identified by match to protein family HMM PF04964; hypothetical protein 1757250 7888486 GBP346_A1805 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896514.1 1757053 D 536230 CDS YP_002896515.1 237812064 7888126 1757333..1757833 1 NC_012695.1 identified by match to protein family HMM PF01478; peptidase A24A, prepilin type IV 1757833 7888126 GBP346_A1806 Burkholderia pseudomallei MSHR346 peptidase A24A, prepilin type IV YP_002896515.1 1757333 D 536230 CDS YP_002896516.1 237812065 7887986 1757830..1758297 1 NC_012695.1 identified by match to protein family HMM PF07811; hypothetical protein 1758297 7887986 GBP346_A1807 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896516.1 1757830 D 536230 CDS YP_002896517.1 237812066 7889013 1758377..1759276 1 NC_012695.1 identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177; Flp pilus assembly protein CpaB 1759276 cpaB_1 7889013 cpaB_1 Burkholderia pseudomallei MSHR346 Flp pilus assembly protein CpaB YP_002896517.1 1758377 D 536230 CDS YP_002896518.1 237812067 7890178 1759340..1760665 1 NC_012695.1 identified by match to protein family HMM PF00263; type II/III secretion system protein 1760665 7890178 GBP346_A1809 Burkholderia pseudomallei MSHR346 type II/III secretion system protein YP_002896518.1 1759340 D 536230 CDS YP_002896519.1 237812068 7890755 1760732..1761970 1 NC_012695.1 response regulator receiver protein 1761970 7890755 GBP346_A1810 Burkholderia pseudomallei MSHR346 response regulator receiver protein YP_002896519.1 1760732 D 536230 CDS YP_002896520.1 237812069 7887063 1761974..1763317 1 NC_012695.1 identified by match to protein family HMM PF00437; tight adherence protein TadA 1763317 tadA_1 7887063 tadA_1 Burkholderia pseudomallei MSHR346 tight adherence protein TadA YP_002896520.1 1761974 D 536230 CDS YP_002896521.1 237812070 7887416 1763310..1764299 1 NC_012695.1 identified by match to protein family HMM PF00482; type II secretion system protein 1764299 7887416 GBP346_A1812 Burkholderia pseudomallei MSHR346 type II secretion system protein YP_002896521.1 1763310 D 536230 CDS YP_002896522.1 237812071 7887851 1764305..1765327 1 NC_012695.1 identified by match to protein family HMM PF00482; type II secretion system protein 1765327 7887851 GBP346_A1813 Burkholderia pseudomallei MSHR346 type II secretion system protein YP_002896522.1 1764305 D 536230 CDS YP_002896523.1 237812072 7887939 1765364..1766299 1 NC_012695.1 identified by match to protein family HMM PF07719; TPR domain protein 1766299 7887939 GBP346_A1814 Burkholderia pseudomallei MSHR346 TPR domain protein YP_002896523.1 1765364 D 536230 CDS YP_002896524.1 237812073 7890732 1766321..1766707 1 NC_012695.1 hypothetical protein 1766707 7890732 GBP346_A1815 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896524.1 1766321 D 536230 CDS YP_002896525.1 237812074 7888492 1766715..1768523 1 NC_012695.1 membrane protein 1768523 7888492 GBP346_A1816 Burkholderia pseudomallei MSHR346 membrane protein YP_002896525.1 1766715 D 536230 CDS YP_002896526.1 237812075 7888717 1768540..1769931 1 NC_012695.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; sigma-54 interaction domain/Fis family transcriptional regulator domain protein 1769931 7888717 GBP346_A1817 Burkholderia pseudomallei MSHR346 sigma-54 interaction domain/Fis family transcriptional regulator domain protein YP_002896526.1 1768540 D 536230 CDS YP_002896527.1 237812076 7888443 1770022..1770735 1 NC_012695.1 hypothetical protein 1770735 7888443 GBP346_A1818 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896527.1 1770022 D 536230 CDS YP_002896528.1 237812077 7887951 complement(1770886..1771530) 1 NC_012695.1 identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; hfq protein 1771530 7887951 GBP346_A1819 Burkholderia pseudomallei MSHR346 hfq protein YP_002896528.1 1770886 R 536230 CDS YP_002896529.1 237812078 7888733 1771835..1772107 1 NC_012695.1 hypothetical protein 1772107 7888733 GBP346_A1820 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896529.1 1771835 D 536230 CDS YP_002896530.1 237812079 7890601 1772122..1772283 1 NC_012695.1 hypothetical protein 1772283 7890601 GBP346_A1822 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896530.1 1772122 D 536230 CDS YP_002896531.1 237812080 7887216 complement(1772271..1773269) 1 NC_012695.1 hypothetical protein 1773269 7887216 GBP346_A1821 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896531.1 1772271 R 536230 CDS YP_002896532.1 237812081 7889297 complement(1773290..1775062) 1 NC_012695.1 identified by match to protein family HMM PF00501; long-chain-fatty-acid--CoA ligase 1775062 7889297 GBP346_A1823 Burkholderia pseudomallei MSHR346 long-chain-fatty-acid--CoA ligase YP_002896532.1 1773290 R 536230 CDS YP_002896533.1 237812082 7888919 complement(1775059..1775172) 1 NC_012695.1 hypothetical protein 1775172 7888919 GBP346_A1824 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896533.1 1775059 R 536230 CDS YP_002896534.1 237812083 7887017 complement(1775247..1776197) 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 1776197 7887017 GBP346_A1825 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002896534.1 1775247 R 536230 CDS YP_002896535.1 237812084 7887912 complement(1776414..1777640) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, sialate:H+ symporter 1777640 7887912 GBP346_A1826 Burkholderia pseudomallei MSHR346 MFS transporter, sialate:H+ symporter YP_002896535.1 1776414 R 536230 CDS YP_002896536.1 237812085 7890835 complement(1777844..1778089) 1 NC_012695.1 hypothetical protein 1778089 7890835 GBP346_A1827 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896536.1 1777844 R 536230 CDS YP_002896537.1 237812086 7888587 1778072..1778626 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 1778626 7888587 GBP346_A1828 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002896537.1 1778072 D 536230 CDS YP_002896538.1 237812087 7888247 1778770..1779396 1 NC_012695.1 identified by match to protein family HMM PF08857; hypothetical protein 1779396 7888247 GBP346_A1829 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896538.1 1778770 D 536230 CDS YP_002896539.1 237812088 7889337 1779443..1781155 1 NC_012695.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate permease family protein 1781155 7889337 GBP346_A1830 Burkholderia pseudomallei MSHR346 sulfate permease family protein YP_002896539.1 1779443 D 536230 CDS YP_002896540.1 237812089 7889903 complement(1781590..1783176) 1 NC_012695.1 hypothetical protein 1783176 7889903 GBP346_A1831 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896540.1 1781590 R 536230 CDS YP_002896541.1 237812090 7888348 complement(1783413..1784900) 1 NC_012695.1 identified by match to protein family HMM PF04185; phosphoesterase family protein 1784900 7888348 GBP346_A1832 Burkholderia pseudomallei MSHR346 phosphoesterase family protein YP_002896541.1 1783413 R 536230 CDS YP_002896542.1 237812091 7887390 complement(1785051..1785353) 1 NC_012695.1 hypothetical protein 1785353 7887390 GBP346_A1833 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896542.1 1785051 R 536230 CDS YP_002896543.1 237812092 7888853 1785434..1787146 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis domain protein 1787146 7888853 GBP346_A1834 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis domain protein YP_002896543.1 1785434 D 536230 CDS YP_002896544.1 237812093 7889484 1787188..1787316 1 NC_012695.1 hypothetical protein 1787316 7889484 GBP346_A1835 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896544.1 1787188 D 536230 CDS YP_002896545.1 237812094 7889180 1787660..1790320 1 NC_012695.1 identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 1790320 rnr 7889180 rnr Burkholderia pseudomallei MSHR346 ribonuclease R YP_002896545.1 1787660 D 536230 CDS YP_002896546.1 237812095 7889978 1790452..1791195 1 NC_012695.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase, TrmH family, group 3 1791195 7889978 GBP346_A1839 Burkholderia pseudomallei MSHR346 RNA methyltransferase, TrmH family, group 3 YP_002896546.1 1790452 D 536230 CDS YP_002896547.1 237812096 7888334 1791206..1791505 1 NC_012695.1 hypothetical protein 1791505 7888334 GBP346_A1840 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896547.1 1791206 D 536230 CDS YP_002896548.1 237812097 7889066 1791568..1792467 1 NC_012695.1 identified by match to protein family HMM PF01471; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase AmiD 1792467 7889066 GBP346_A1841 Burkholderia pseudomallei MSHR346 N-acetylmuramoyl-L-alanine amidase AmiD YP_002896548.1 1791568 D 536230 CDS YP_002896549.1 237812098 7890119 1792736..1793431 1 NC_012695.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1793431 rpiA 7890119 rpiA Burkholderia pseudomallei MSHR346 ribose-5-phosphate isomerase A YP_002896549.1 1792736 D 536230 CDS YP_002896550.1 237812099 7890050 1793769..1794482 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 1794482 7890050 GBP346_A1843 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002896550.1 1793769 D 536230 CDS YP_002896551.1 237812100 7889788 1794582..1795565 1 NC_012695.1 identified by match to protein family HMM PF01118; match to protein family HMM PF01408; oxidoreductase, NAD-binding 1795565 7889788 GBP346_A1845 Burkholderia pseudomallei MSHR346 oxidoreductase, NAD-binding YP_002896551.1 1794582 D 536230 CDS YP_002896552.1 237812101 7890466 complement(1795550..1795876) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1795876 7890466 GBP346_A1844 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896552.1 1795550 R 536230 CDS YP_002896553.1 237812102 7887143 complement(1795966..1796625) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein 1796625 7887143 GBP346_A1846 Burkholderia pseudomallei MSHR346 amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein YP_002896553.1 1795966 R 536230 CDS YP_002896554.1 237812103 7886696 complement(1796755..1797549) 1 NC_012695.1 identified by match to protein family HMM PF00497; amino acid ABC transporter, periplasmic amino acid-binding protein 1797549 7886696 GBP346_A1847 Burkholderia pseudomallei MSHR346 amino acid ABC transporter, periplasmic amino acid-binding protein YP_002896554.1 1796755 R 536230 CDS YP_002896555.1 237812104 7887333 complement(1797660..1798697) 1 NC_012695.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1798697 pyrD 7887333 pyrD Burkholderia pseudomallei MSHR346 dihydroorotate dehydrogenase 2 YP_002896555.1 1797660 R 536230 CDS YP_002896556.1 237812105 7887183 complement(1798802..1799632) 1 NC_012695.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1799632 7887183 GBP346_A1849 Burkholderia pseudomallei MSHR346 arginyl-tRNA-protein transferase YP_002896556.1 1798802 R 536230 CDS YP_002896557.1 237812106 7889732 complement(1799666..1800433) 1 NC_012695.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1800433 aat 7889732 aat Burkholderia pseudomallei MSHR346 leucyl/phenylalanyl-tRNA--protein transferase YP_002896557.1 1799666 R 536230 CDS YP_002896558.1 237812107 7890365 complement(1800442..1800987) 1 NC_012695.1 identified by match to protein family HMM PF00293; nudix hydrolase 23, (atnudt23) 1800987 7890365 GBP346_A1851 Burkholderia pseudomallei MSHR346 nudix hydrolase 23, (atnudt23) YP_002896558.1 1800442 R 536230 CDS YP_002896559.1 237812108 7889198 1801635..1802204 1 NC_012695.1 identified by match to protein family HMM PF03928; hypothetical protein 1802204 7889198 GBP346_A1853 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896559.1 1801635 D 536230 CDS YP_002896560.1 237812109 7888645 1802209..1802547 1 NC_012695.1 identified by match to protein family HMM PF00893; quaternary ammonium compound-resistance protein QacE 1802547 7888645 GBP346_A1854 Burkholderia pseudomallei MSHR346 quaternary ammonium compound-resistance protein QacE YP_002896560.1 1802209 D 536230 CDS YP_002896561.1 237812110 7887700 1802577..1803719 1 NC_012695.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1803719 7887700 GBP346_A1855 Burkholderia pseudomallei MSHR346 3-hydroxyisobutyryl-CoA hydrolase YP_002896561.1 1802577 D 536230 CDS YP_002896562.1 237812111 7888737 1803810..1803968 1 NC_012695.1 hypothetical protein 1803968 7888737 GBP346_A1856 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896562.1 1803810 D 536230 CDS YP_002896563.1 237812112 7887374 1804001..1804159 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1804159 7887374 GBP346_A1857 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896563.1 1804001 D 536230 CDS YP_002896564.1 237812113 7888807 complement(1804175..1804621) 1 NC_012695.1 hypothetical protein 1804621 7888807 GBP346_A1858 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896564.1 1804175 R 536230 CDS YP_002896565.1 237812114 7887188 1804968..1806125 1 NC_012695.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1806125 ssuD_1 7887188 ssuD_1 Burkholderia pseudomallei MSHR346 alkanesulfonate monooxygenase YP_002896565.1 1804968 D 536230 CDS YP_002896566.1 237812115 7889074 1806143..1806952 1 NC_012695.1 identified by match to protein family HMM PF00528; putative aliphatic sulfonates transport permease protein SsuC 1806952 7889074 GBP346_A1860 Burkholderia pseudomallei MSHR346 putative aliphatic sulfonates transport permease protein SsuC YP_002896566.1 1806143 D 536230 CDS YP_002896567.1 237812116 7886884 1806949..1807932 1 NC_012695.1 identified by match to protein family HMM PF00005; aliphatic sulfonates import ATP-binding protein SsuB 1807932 7886884 GBP346_A1861 Burkholderia pseudomallei MSHR346 aliphatic sulfonates import ATP-binding protein SsuB YP_002896567.1 1806949 D 536230 CDS YP_002896568.1 237812117 7890655 1808021..1808236 1 NC_012695.1 identified by match to protein family HMM PF03459; match to protein family HMM TIGR00638; molybdenum-pterin binding protein 1808236 7890655 GBP346_A1862 Burkholderia pseudomallei MSHR346 molybdenum-pterin binding protein YP_002896568.1 1808021 D 536230 CDS YP_002896569.1 237812118 7888925 1808365..1808562 1 NC_012695.1 hypothetical protein 1808562 7888925 GBP346_A1863 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896569.1 1808365 D 536230 CDS YP_002896570.1 237812119 7890237 1808636..1808890 1 NC_012695.1 hypothetical protein 1808890 7890237 GBP346_A1864 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896570.1 1808636 D 536230 CDS YP_002896571.1 237812120 7889173 complement(1809857..1811176) 1 NC_012695.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00742; tRNA-dihydrouridine synthase A 1811176 7889173 GBP346_A1866 Burkholderia pseudomallei MSHR346 tRNA-dihydrouridine synthase A YP_002896571.1 1809857 R 536230 CDS YP_002896572.1 237812121 7889757 1810959..1811414 1 NC_012695.1 hypothetical protein 1811414 7889757 GBP346_A1867 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896572.1 1810959 D 536230 CDS YP_002896573.1 237812122 7887910 complement(1811465..1812772) 1 NC_012695.1 identified by match to protein family HMM PF00375; transporter, DAACS family 1812772 7887910 GBP346_A1868 Burkholderia pseudomallei MSHR346 transporter, DAACS family YP_002896573.1 1811465 R 536230 CDS YP_002896574.1 237812123 7887781 1812997..1813329 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1813329 7887781 GBP346_A1869 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896574.1 1812997 D 536230 CDS YP_002896575.1 237812124 7888381 1813388..1813594 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1813594 7888381 GBP346_A1870 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896575.1 1813388 D 536230 CDS YP_002896576.1 237812125 7890352 complement(1813955..1814431) 1 NC_012695.1 identified by match to protein family HMM PF01638; putative transcriptional regulator 1814431 7890352 GBP346_A1871 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002896576.1 1813955 R 536230 CDS YP_002896577.1 237812126 7887816 1814613..1815050 1 NC_012695.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 1815050 7887816 GBP346_A1872 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002896577.1 1814613 D 536230 CDS YP_002896578.1 237812127 7887200 1815326..1816378 1 NC_012695.1 identified by match to protein family HMM PF00248; protein tas 1816378 7887200 GBP346_A1873 Burkholderia pseudomallei MSHR346 protein tas YP_002896578.1 1815326 D 536230 CDS YP_002896579.1 237812128 7889266 1816734..1817795 1 NC_012695.1 identified by match to protein family HMM PF03773; permease 1817795 7889266 GBP346_A1874 Burkholderia pseudomallei MSHR346 permease YP_002896579.1 1816734 D 536230 CDS YP_002896580.1 237812129 7890604 1818110..1818532 1 NC_012695.1 hypothetical protein 1818532 7890604 GBP346_A1875 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896580.1 1818110 D 536230 CDS YP_002896581.1 237812130 7888148 complement(1818638..1819474) 1 NC_012695.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR01291; ABC transporter, permease NodJ 1819474 7888148 GBP346_A1876 Burkholderia pseudomallei MSHR346 ABC transporter, permease NodJ YP_002896581.1 1818638 R 536230 CDS YP_002896582.1 237812131 7888238 complement(1819479..1820438) 1 NC_012695.1 involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI 1820438 nodI 7888238 nodI Burkholderia pseudomallei MSHR346 nodulation ABC transporter NodI YP_002896582.1 1819479 R 536230 CDS YP_002896583.1 237812132 7889683 1820623..1821114 1 NC_012695.1 identified by match to protein family HMM PF00582; universal stress family protein 1821114 7889683 GBP346_A1878 Burkholderia pseudomallei MSHR346 universal stress family protein YP_002896583.1 1820623 D 536230 CDS YP_002896584.1 237812133 7887131 complement(1821533..1822267) 1 NC_012695.1 hypothetical protein 1822267 7887131 GBP346_A1879 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896584.1 1821533 R 536230 CDS YP_002896585.1 237812134 7889553 complement(1822301..1822501) 1 NC_012695.1 hypothetical protein 1822501 7889553 GBP346_A1880 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896585.1 1822301 R 536230 CDS YP_002896586.1 237812135 7887859 1822520..1822660 1 NC_012695.1 hypothetical protein 1822660 7887859 GBP346_A1881 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896586.1 1822520 D 536230 CDS YP_002896587.1 237812136 7890379 complement(1822690..1823337) 1 NC_012695.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1823337 lexA 7890379 lexA Burkholderia pseudomallei MSHR346 LexA repressor YP_002896587.1 1822690 R 536230 CDS YP_002896588.1 237812137 7887010 complement(1823401..1823571) 1 NC_012695.1 hypothetical protein 1823571 7887010 GBP346_A1883 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896588.1 1823401 R 536230 CDS YP_002896589.1 237812138 7887961 1823640..1824677 1 NC_012695.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00971; sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) 1824677 7887961 GBP346_A1884 Burkholderia pseudomallei MSHR346 sulfate-binding protein (Sulfate starvation-induced protein2) (SSI2) YP_002896589.1 1823640 D 536230 CDS YP_002896590.1 237812139 7888758 1824810..1825703 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; sulfate ABC transporter, permease protein CysT 1825703 cysT 7888758 cysT Burkholderia pseudomallei MSHR346 sulfate ABC transporter, permease protein CysT YP_002896590.1 1824810 D 536230 CDS YP_002896591.1 237812140 7887415 1825700..1826734 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; sulfate ABC transporter, permease protein CysW 1826734 cysW 7887415 cysW Burkholderia pseudomallei MSHR346 sulfate ABC transporter, permease protein CysW YP_002896591.1 1825700 D 536230 CDS YP_002896592.1 237812141 7890372 1826748..1827803 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; match to protein family HMM TIGR00968; sulfate/thiosulfate import ATP-binding protein CysA (Sulfate-transporting ATPase) 1827803 7890372 GBP346_A1887 Burkholderia pseudomallei MSHR346 sulfate/thiosulfate import ATP-binding protein CysA (Sulfate-transporting ATPase) YP_002896592.1 1826748 D 536230 CDS YP_002896593.1 237812142 7890760 1827873..1828799 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator CysB-like protein 1828799 7890760 GBP346_A1888 Burkholderia pseudomallei MSHR346 transcriptional regulator CysB-like protein YP_002896593.1 1827873 D 536230 CDS YP_002896594.1 237812143 7889346 1828914..1829063 1 NC_012695.1 hypothetical protein 1829063 7889346 GBP346_A1889 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896594.1 1828914 D 536230 CDS YP_002896595.1 237812144 7889414 1829158..1830120 1 NC_012695.1 identified by match to protein family HMM PF00532; binding protein component of ABC ribose transporter 1830120 7889414 GBP346_A1890 Burkholderia pseudomallei MSHR346 binding protein component of ABC ribose transporter YP_002896595.1 1829158 D 536230 CDS YP_002896596.1 237812145 7890440 complement(1830181..1830297) 1 NC_012695.1 hypothetical protein 1830297 7890440 GBP346_A1891 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896596.1 1830181 R 536230 CDS YP_002896597.1 237812146 7889154 1830263..1831834 1 NC_012695.1 identified by match to protein family HMM PF00005; putative ribose ABC transporter, ATP-binding protein 1831834 7889154 GBP346_A1892 Burkholderia pseudomallei MSHR346 putative ribose ABC transporter, ATP-binding protein YP_002896597.1 1830263 D 536230 CDS YP_002896598.1 237812147 7888901 1831905..1832918 1 NC_012695.1 identified by match to protein family HMM PF02653; membrane protein component of ABC ribose transporter 1832918 7888901 GBP346_A1893 Burkholderia pseudomallei MSHR346 membrane protein component of ABC ribose transporter YP_002896598.1 1831905 D 536230 CDS YP_002896599.1 237812148 7888018 1832948..1833979 1 NC_012695.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor RbsR 1833979 7888018 GBP346_A1894 Burkholderia pseudomallei MSHR346 ribose operon repressor RbsR YP_002896599.1 1832948 D 536230 CDS YP_002896600.1 237812149 7887136 1833976..1834950 1 NC_012695.1 identified by match to protein family HMM PF00294; match to protein family HMM PF08543; match to protein family HMM TIGR02152; ribokinase 1834950 rbsK_1 7887136 rbsK_1 Burkholderia pseudomallei MSHR346 ribokinase YP_002896600.1 1833976 D 536230 CDS YP_002896601.1 237812150 7888097 1835165..1837045 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein I 1837045 7888097 GBP346_A1896 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein I YP_002896601.1 1835165 D 536230 CDS YP_002896602.1 237812151 7890851 1837374..1837751 1 NC_012695.1 hypothetical protein 1837751 7890851 GBP346_A1897 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896602.1 1837374 D 536230 CDS YP_002896603.1 237812152 7889645 1837928..1839850 1 NC_012695.1 identified by match to protein family HMM PF06798; match to protein family HMM PF08298; histidine kinase 1839850 7889645 GBP346_A1898 Burkholderia pseudomallei MSHR346 histidine kinase YP_002896603.1 1837928 D 536230 CDS YP_002896604.1 237812153 7889152 1839974..1841239 1 NC_012695.1 identified by match to protein family HMM PF04285; hypothetical protein 1841239 7889152 GBP346_A1899 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896604.1 1839974 D 536230 CDS YP_002896605.1 237812154 7889735 1841239..1842921 1 NC_012695.1 identified by match to protein family HMM PF04293; SpoVR family protein 1842921 7889735 GBP346_A1900 Burkholderia pseudomallei MSHR346 SpoVR family protein YP_002896605.1 1841239 D 536230 CDS YP_002896606.1 237812155 7890241 1842888..1843283 1 NC_012695.1 hypothetical protein 1843283 7890241 GBP346_A1901 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896606.1 1842888 D 536230 CDS YP_002896607.1 237812156 7888105 1843391..1844695 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883; alpha-ketoglutarate permease 1844695 7888105 GBP346_A1902 Burkholderia pseudomallei MSHR346 alpha-ketoglutarate permease YP_002896607.1 1843391 D 536230 CDS YP_002896608.1 237812157 7887644 1844948..1845994 1 NC_012695.1 ABC transporter substrate-binding protein 1845994 7887644 GBP346_A1903 Burkholderia pseudomallei MSHR346 ABC transporter substrate-binding protein YP_002896608.1 1844948 D 536230 CDS YP_002896609.1 237812158 7887427 1846046..1846369 1 NC_012695.1 hypothetical protein 1846369 7887427 GBP346_A1904 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896609.1 1846046 D 536230 CDS YP_002896610.1 237812159 7887904 1846509..1847729 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 1847729 7887904 GBP346_A1905 Burkholderia pseudomallei MSHR346 transposase YP_002896610.1 1846509 D 536230 CDS YP_002896611.1 237812160 7887053 1847777..1848607 1 NC_012695.1 identified by match to protein family HMM PF00005; taurine import ATP-binding protein TauB 1848607 7887053 GBP346_A1906 Burkholderia pseudomallei MSHR346 taurine import ATP-binding protein TauB YP_002896611.1 1847777 D 536230 CDS YP_002896612.1 237812161 7890332 1848634..1849575 1 NC_012695.1 identified by match to protein family HMM PF00528; permease 1849575 7890332 GBP346_A1907 Burkholderia pseudomallei MSHR346 permease YP_002896612.1 1848634 D 536230 CDS YP_002896613.1 237812162 7889743 1850133..1850324 1 NC_012695.1 identified by match to protein family HMM PF04964; hypothetical protein 1850324 7889743 GBP346_A1908 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896613.1 1850133 D 536230 CDS YP_002896614.1 237812163 7890200 1850350..1850868 1 NC_012695.1 identified by match to protein family HMM PF01478; peptidase A24A, prepilin type IV 1850868 7890200 GBP346_A1909 Burkholderia pseudomallei MSHR346 peptidase A24A, prepilin type IV YP_002896614.1 1850350 D 536230 CDS YP_002896615.1 237812164 7888366 1850881..1851933 1 NC_012695.1 identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177; Flp pilus assembly protein CpaB 1851933 cpaB_2 7888366 cpaB_2 Burkholderia pseudomallei MSHR346 Flp pilus assembly protein CpaB YP_002896615.1 1850881 D 536230 CDS YP_002896616.1 237812165 7890588 1851968..1853416 1 NC_012695.1 identified by match to protein family HMM PF00263; type II/III secretion system protein 1853416 7890588 GBP346_A1911 Burkholderia pseudomallei MSHR346 type II/III secretion system protein YP_002896616.1 1851968 D 536230 CDS YP_002896617.1 237812166 7889309 1853450..1853863 1 NC_012695.1 putative lipoprotein 1853863 7889309 GBP346_A1912 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896617.1 1853450 D 536230 CDS YP_002896618.1 237812167 7887157 1853874..1855109 1 NC_012695.1 putative CpaE protein 1855109 7887157 GBP346_A1913 Burkholderia pseudomallei MSHR346 putative CpaE protein YP_002896618.1 1853874 D 536230 CDS YP_002896619.1 237812168 7887861 1855070..1856680 1 NC_012695.1 identified by match to protein family HMM PF00437; CpaF 1856680 7887861 GBP346_A1914 Burkholderia pseudomallei MSHR346 CpaF YP_002896619.1 1855070 D 536230 CDS YP_002896620.1 237812169 7888869 1856677..1857672 1 NC_012695.1 identified by match to protein family HMM PF00482; type II secretion system protein 1857672 7888869 GBP346_A1915 Burkholderia pseudomallei MSHR346 type II secretion system protein YP_002896620.1 1856677 D 536230 CDS YP_002896621.1 237812170 7888621 1857669..1858613 1 NC_012695.1 identified by match to protein family HMM PF00482; type II secretion system protein 1858613 7888621 GBP346_A1916 Burkholderia pseudomallei MSHR346 type II secretion system protein YP_002896621.1 1857669 D 536230 CDS YP_002896622.1 237812171 7890218 1858610..1859722 1 NC_012695.1 identified by match to protein family HMM PF07719; match to protein family HMM PF07721; tetratricopeptide repeat protein 1859722 7890218 GBP346_A1917 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002896622.1 1858610 D 536230 CDS YP_002896623.1 237812172 7887436 1859719..1860147 1 NC_012695.1 identified by match to protein family HMM PF07811; TadE family protein 1860147 7887436 GBP346_A1918 Burkholderia pseudomallei MSHR346 TadE family protein YP_002896623.1 1859719 D 536230 CDS YP_002896624.1 237812173 7890708 1860140..1861171 1 NC_012695.1 identified by match to protein family HMM PF07811; TadE family protein 1861171 7890708 GBP346_A1919 Burkholderia pseudomallei MSHR346 TadE family protein YP_002896624.1 1860140 D 536230 CDS YP_002896625.1 237812174 7889799 1861471..1862286 1 NC_012695.1 identified by match to protein family HMM PF00497; polar amino acid ABC uptake transporter substrate binding protein 1862286 7889799 GBP346_A1920 Burkholderia pseudomallei MSHR346 polar amino acid ABC uptake transporter substrate binding protein YP_002896625.1 1861471 D 536230 CDS YP_002896626.1 237812175 7888535 1862331..1862450 1 NC_012695.1 hypothetical protein 1862450 7888535 GBP346_A1921 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896626.1 1862331 D 536230 CDS YP_002896627.1 237812176 7889406 1862447..1862683 1 NC_012695.1 hypothetical protein 1862683 7889406 GBP346_A1922 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896627.1 1862447 D 536230 CDS YP_002896628.1 237812177 7889345 1862685..1863410 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; general L-amino acid transport system permease protein AapQ 1863410 7889345 GBP346_A1923 Burkholderia pseudomallei MSHR346 general L-amino acid transport system permease protein AapQ YP_002896628.1 1862685 D 536230 CDS YP_002896629.1 237812178 7890264 1863413..1864156 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein 1864156 7890264 GBP346_A1924 Burkholderia pseudomallei MSHR346 amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein YP_002896629.1 1863413 D 536230 CDS YP_002896630.1 237812179 7887139 complement(1864198..1865613) 1 NC_012695.1 identified by match to protein family HMM PF01551; peptidase, M23/M37 family 1865613 7887139 GBP346_A1925 Burkholderia pseudomallei MSHR346 peptidase, M23/M37 family YP_002896630.1 1864198 R 536230 CDS YP_002896631.1 237812180 7887174 complement(1865966..1866637) 1 NC_012695.1 identified by match to protein family HMM PF00440; match to protein family HMM PF08361; regulator AmrR 1866637 7887174 GBP346_A1926 Burkholderia pseudomallei MSHR346 regulator AmrR YP_002896631.1 1865966 R 536230 CDS YP_002896632.1 237812181 7888022 1866781..1867980 1 NC_012695.1 MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein precursor 1867980 7888022 GBP346_A1927 Burkholderia pseudomallei MSHR346 periplasmic multidrug efflux lipoprotein precursor YP_002896632.1 1866781 D 536230 CDS YP_002896633.1 237812182 7887570 1867997..1871128 1 NC_012695.1 MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 1871128 7887570 GBP346_A1928 Burkholderia pseudomallei MSHR346 multidrug efflux protein YP_002896633.1 1867997 D 536230 CDS YP_002896634.1 237812183 7890461 1871125..1872675 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane efflux protein OprA 1872675 oprA 7890461 oprA Burkholderia pseudomallei MSHR346 outer membrane efflux protein OprA YP_002896634.1 1871125 D 536230 CDS YP_002896635.1 237812184 7888823 1872662..1872790 1 NC_012695.1 hypothetical protein 1872790 7888823 GBP346_A1931 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896635.1 1872662 D 536230 CDS YP_002896636.1 237812185 7887438 complement(1872751..1873023) 1 NC_012695.1 hypothetical protein 1873023 7887438 GBP346_A1930 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896636.1 1872751 R 536230 CDS YP_002896637.1 237812186 7889823 complement(1873020..1873175) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1873175 7889823 GBP346_A1932 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896637.1 1873020 R 536230 CDS YP_002896638.1 237812187 7889614 complement(1873234..1873605) 1 NC_012695.1 transcriptional regulator, AraC family 1873605 7889614 GBP346_A1933 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002896638.1 1873234 R 536230 CDS YP_002896639.1 237812188 7888527 1873828..1874169 1 NC_012695.1 hypothetical protein 1874169 7888527 GBP346_A1934 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896639.1 1873828 D 536230 CDS YP_002896640.1 237812189 7886924 complement(1874171..1874434) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1874434 7886924 GBP346_A1935 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896640.1 1874171 R 536230 CDS YP_002896641.1 237812190 7890403 1874617..1875129 1 NC_012695.1 identified by match to protein family HMM PF00419; fimbrial protein 1875129 7890403 GBP346_A1936 Burkholderia pseudomallei MSHR346 fimbrial protein YP_002896641.1 1874617 D 536230 CDS YP_002896642.1 237812191 7890259 1875279..1877720 1 NC_012695.1 identified by match to protein family HMM PF00577; fimbrial usher protein 1877720 7890259 GBP346_A1937 Burkholderia pseudomallei MSHR346 fimbrial usher protein YP_002896642.1 1875279 D 536230 CDS YP_002896643.1 237812192 7890885 1877841..1878590 1 NC_012695.1 identified by match to protein family HMM PF00345; MrpD 1878590 7890885 GBP346_A1938 Burkholderia pseudomallei MSHR346 MrpD YP_002896643.1 1877841 D 536230 CDS YP_002896644.1 237812193 7886702 1878587..1879612 1 NC_012695.1 fimbrial protein 1879612 7886702 GBP346_A1939 Burkholderia pseudomallei MSHR346 fimbrial protein YP_002896644.1 1878587 D 536230 CDS YP_002896645.1 237812194 7887040 complement(1879663..1881426) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1881426 7887040 GBP346_A1940 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002896645.1 1879663 R 536230 CDS YP_002896646.1 237812195 7888794 complement(1881423..1881551) 1 NC_012695.1 hypothetical protein 1881551 7888794 GBP346_A1941 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896646.1 1881423 R 536230 CDS YP_002896647.1 237812196 7889700 complement(1881560..1883161) 1 NC_012695.1 identified by match to protein family HMM PF00733; asparagine synthase family protein 1883161 7889700 GBP346_A1942 Burkholderia pseudomallei MSHR346 asparagine synthase family protein YP_002896647.1 1881560 R 536230 CDS YP_002896648.1 237812197 7888913 complement(1883238..1883948) 1 NC_012695.1 hypothetical protein 1883948 7888913 GBP346_A1943 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896648.1 1883238 R 536230 CDS YP_002896649.1 237812198 7887035 complement(1884001..1884144) 1 NC_012695.1 hypothetical protein 1884144 7887035 GBP346_A1944 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896649.1 1884001 R 536230 CDS YP_002896650.1 237812199 7887915 complement(1884384..1884692) 1 NC_012695.1 hypothetical protein 1884692 7887915 GBP346_A1945 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896650.1 1884384 R 536230 CDS YP_002896651.1 237812200 7888324 1884741..1885730 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 1885730 7888324 GBP346_A1946 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002896651.1 1884741 D 536230 CDS YP_002896652.1 237812201 7890570 1885832..1886779 1 NC_012695.1 identified by match to protein family HMM PF00532; ribose ABC transporter, periplasmic ribose-binding protein 1886779 7890570 GBP346_A1947 Burkholderia pseudomallei MSHR346 ribose ABC transporter, periplasmic ribose-binding protein YP_002896652.1 1885832 D 536230 CDS YP_002896653.1 237812202 7888513 1886773..1888380 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein 1888380 rbsA 7888513 rbsA Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein YP_002896653.1 1886773 D 536230 CDS YP_002896654.1 237812203 7887187 1888373..1889392 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein 1889392 7887187 GBP346_A1949 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein YP_002896654.1 1888373 D 536230 CDS YP_002896655.1 237812204 7888407 1889389..1889613 1 NC_012695.1 hypothetical protein 1889613 7888407 GBP346_A1950 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896655.1 1889389 D 536230 CDS YP_002896656.1 237812205 7889571 1889610..1890701 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family 1890701 7889571 GBP346_A1951 Burkholderia pseudomallei MSHR346 oxidoreductase, zinc-binding dehydrogenase family YP_002896656.1 1889610 D 536230 CDS YP_002896657.1 237812206 7887481 1890732..1892273 1 NC_012695.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, fggy family 1892273 7887481 GBP346_A1952 Burkholderia pseudomallei MSHR346 carbohydrate kinase, fggy family YP_002896657.1 1890732 D 536230 CDS YP_002896658.1 237812207 7888294 1892270..1893016 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1893016 7888294 GBP346_A1953 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002896658.1 1892270 D 536230 CDS YP_002896659.1 237812208 7890769 1893106..1893234 1 NC_012695.1 hypothetical protein 1893234 7890769 GBP346_A1954 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896659.1 1893106 D 536230 CDS YP_002896660.1 237812209 7888482 1893231..1894052 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1894052 7888482 GBP346_A1955 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896660.1 1893231 D 536230 CDS YP_002896661.1 237812210 7890390 1894087..1894800 1 NC_012695.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 1894800 7890390 GBP346_A1956 Burkholderia pseudomallei MSHR346 extracytoplasmic-function sigma-70 factor YP_002896661.1 1894087 D 536230 CDS YP_002896662.1 237812211 7887863 1894856..1895098 1 NC_012695.1 identified by match to protein family HMM PF03621; MbtH domain protein 1895098 7887863 GBP346_A1957 Burkholderia pseudomallei MSHR346 MbtH domain protein YP_002896662.1 1894856 D 536230 CDS YP_002896663.1 237812212 7888217 1895157..1896173 1 NC_012695.1 identified by match to protein family HMM PF02668; putative syringomycin biosynthesis enzyme 1896173 7888217 GBP346_A1958 Burkholderia pseudomallei MSHR346 putative syringomycin biosynthesis enzyme YP_002896663.1 1895157 D 536230 CDS YP_002896664.1 237812213 7887855 1896211..1897101 1 NC_012695.1 identified by match to protein family HMM PF00005; ferric enterobactin transport ATP-binding protein FepC 1897101 7887855 GBP346_A1959 Burkholderia pseudomallei MSHR346 ferric enterobactin transport ATP-binding protein FepC YP_002896664.1 1896211 D 536230 CDS YP_002896665.1 237812214 7888460 1897098..1899218 1 NC_012695.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1899218 7888460 GBP346_A1960 Burkholderia pseudomallei MSHR346 iron-hydroxamate transporter permease subunit YP_002896665.1 1897098 D 536230 CDS YP_002896666.1 237812215 7889917 1899215..1900021 1 NC_012695.1 ferric iron reductase protein 1900021 7889917 GBP346_A1961 Burkholderia pseudomallei MSHR346 ferric iron reductase protein YP_002896666.1 1899215 D 536230 CDS YP_002896667.1 237812216 7887497 1900018..1901214 1 NC_012695.1 identified by match to protein family HMM PF01497; iron compound ABC transporter, periplasmic iron-compound-binding protein 1901214 7887497 GBP346_A1962 Burkholderia pseudomallei MSHR346 iron compound ABC transporter, periplasmic iron-compound-binding protein YP_002896667.1 1900018 D 536230 CDS YP_002896668.1 237812217 7888667 complement(1901413..1901988) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF09351; hypothetical protein 1901988 7888667 GBP346_A1963 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896668.1 1901413 R 536230 CDS YP_002896669.1 237812218 7886819 complement(1902486..1904174) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01194; cyclic peptide ABC transporter, ATP-binding protein 1904174 7886819 GBP346_A1964 Burkholderia pseudomallei MSHR346 cyclic peptide ABC transporter, ATP-binding protein YP_002896669.1 1902486 R 536230 CDS YP_002896670.1 237812219 7888327 complement(1904559..1904738) 1 NC_012695.1 hypothetical protein 1904738 7888327 GBP346_A1965 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896670.1 1904559 R 536230 CDS YP_002896671.1 237812220 7890907 1904817..1914719 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D 1914719 7890907 GBP346_A1966 Burkholderia pseudomallei MSHR346 linear gramicidin synthetase subunit D YP_002896671.1 1904817 D 536230 CDS YP_002896672.1 237812221 7889586 1914768..1919987 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; putative non-ribosomal peptide synthetase 1919987 7889586 GBP346_A1967 Burkholderia pseudomallei MSHR346 putative non-ribosomal peptide synthetase YP_002896672.1 1914768 D 536230 CDS YP_002896673.1 237812222 7889509 1919984..1921537 1 NC_012695.1 L-ornithine 5-monooxygenase 1921537 pvdA 7889509 pvdA Burkholderia pseudomallei MSHR346 L-ornithine 5-monooxygenase YP_002896673.1 1919984 D 536230 CDS YP_002896674.1 237812223 7887737 1921585..1923798 1 NC_012695.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783; ornibactin receptor 1923798 7887737 GBP346_A1969 Burkholderia pseudomallei MSHR346 ornibactin receptor YP_002896674.1 1921585 D 536230 CDS YP_002896675.1 237812224 7890409 1923863..1924702 1 NC_012695.1 hypothetical protein 1924702 7890409 GBP346_A1970 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896675.1 1923863 D 536230 CDS YP_002896676.1 237812225 7890568 complement(1925008..1926606) 1 NC_012695.1 identified by match to protein family HMM PF01656; match to protein family HMM PF07685; cobyrinic Acid a,c-diamide synthase 1926606 7890568 GBP346_A1971 Burkholderia pseudomallei MSHR346 cobyrinic Acid a,c-diamide synthase YP_002896676.1 1925008 R 536230 CDS YP_002896677.1 237812226 7888312 complement(1926611..1927213) 1 NC_012695.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1927213 cobO 7888312 cobO Burkholderia pseudomallei MSHR346 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_002896677.1 1926611 R 536230 CDS YP_002896678.1 237812227 7890771 complement(1927272..1927718) 1 NC_012695.1 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 1927718 7890771 GBP346_A1973 Burkholderia pseudomallei MSHR346 cobalamin biosynthesis protein CbiG YP_002896678.1 1927272 R 536230 CDS YP_002896679.1 237812228 7890362 1927972..1928187 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1928187 7890362 GBP346_A1975 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896679.1 1927972 D 536230 CDS YP_002896680.1 237812229 7889758 1928588..1929883 1 NC_012695.1 identified by match to protein family HMM PF03824; match to protein family HMM TIGR00802; high-affinity nickel transport protein 1929883 hoxN 7889758 hoxN Burkholderia pseudomallei MSHR346 high-affinity nickel transport protein YP_002896680.1 1928588 D 536230 CDS YP_002896681.1 237812230 7887930 1930005..1931078 1 NC_012695.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; match to protein family HMM TIGR02475; cobalamin biosynthesis protein CobW 1931078 cobW 7887930 cobW Burkholderia pseudomallei MSHR346 cobalamin biosynthesis protein CobW YP_002896681.1 1930005 D 536230 CDS YP_002896682.1 237812231 7888419 1931145..1934990 1 NC_012695.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1934990 cobN 7888419 cobN Burkholderia pseudomallei MSHR346 cobaltochelatase subunit CobN YP_002896682.1 1931145 D 536230 CDS YP_002896683.1 237812232 7890374 1934987..1935616 1 NC_012695.1 hypothetical protein 1935616 7890374 GBP346_A1979 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896683.1 1934987 D 536230 CDS YP_002896684.1 237812233 7889740 1935613..1936896 1 NC_012695.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07726; match to protein family HMM PF07728; magnesium chelatase subunit ChlI 1936896 7889740 GBP346_A1980 Burkholderia pseudomallei MSHR346 magnesium chelatase subunit ChlI YP_002896684.1 1935613 D 536230 CDS YP_002896685.1 237812234 7888641 1936977..1937591 1 NC_012695.1 protoporphyrin IX magnesium chelatase 1937591 7888641 GBP346_A1982 Burkholderia pseudomallei MSHR346 protoporphyrin IX magnesium chelatase YP_002896685.1 1936977 D 536230 CDS YP_002896686.1 237812235 7887933 complement(1937557..1937790) 1 NC_012695.1 hypothetical protein 1937790 7887933 GBP346_A1981 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896686.1 1937557 R 536230 CDS YP_002896687.1 237812236 7888395 1937931..1938617 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02230; carboxylesterase 1938617 7888395 GBP346_A1983 Burkholderia pseudomallei MSHR346 carboxylesterase YP_002896687.1 1937931 D 536230 CDS YP_002896688.1 237812237 7889855 1938642..1938914 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1938914 7889855 GBP346_A1984 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896688.1 1938642 D 536230 CDS YP_002896689.1 237812238 7889301 complement(1938952..1939278) 1 NC_012695.1 hypothetical protein 1939278 7889301 GBP346_A1985 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896689.1 1938952 R 536230 CDS YP_002896690.1 237812239 7889230 complement(1939275..1939469) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 1939469 7889230 GBP346_A1986 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896690.1 1939275 R 536230 CDS YP_002896691.1 237812240 7890733 complement(1939639..1941000) 1 NC_012695.1 identified by match to protein family HMM PF02839; glycosyl hydrolase, family 18 1941000 7890733 GBP346_A1987 Burkholderia pseudomallei MSHR346 glycosyl hydrolase, family 18 YP_002896691.1 1939639 R 536230 CDS YP_002896692.1 237812241 7887304 complement(1941345..1943195) 1 NC_012695.1 identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466; precorrin-3B C(17)-methyltransferase 1943195 7887304 GBP346_A1988 Burkholderia pseudomallei MSHR346 precorrin-3B C(17)-methyltransferase YP_002896692.1 1941345 R 536230 CDS YP_002896693.1 237812242 7889704 complement(1943192..1943926) 1 NC_012695.1 catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase 1943926 cobI 7889704 cobI Burkholderia pseudomallei MSHR346 precorrin-2 C(20)-methyltransferase YP_002896693.1 1943192 R 536230 CDS YP_002896694.1 237812243 7890329 complement(1943923..1944549) 1 NC_012695.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 1944549 cobH 7890329 cobH Burkholderia pseudomallei MSHR346 precorrin-8X methylmutase YP_002896694.1 1943923 R 536230 CDS YP_002896695.1 237812244 7890508 complement(1944542..1945990) 1 NC_012695.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02435; precorrin-3B synthase 1945990 cobG 7890508 cobG Burkholderia pseudomallei MSHR346 precorrin-3B synthase YP_002896695.1 1944542 R 536230 CDS YP_002896696.1 237812245 7887440 complement(1946214..1946372) 1 NC_012695.1 hypothetical protein 1946372 7887440 GBP346_A1993 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896696.1 1946214 R 536230 CDS YP_002896697.1 237812246 7889237 1946388..1947614 1 NC_012695.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase (decarboxylating) 1947614 cobL 7889237 cobL Burkholderia pseudomallei MSHR346 precorrin-6Y C5,15-methyltransferase (decarboxylating) YP_002896697.1 1946388 D 536230 CDS YP_002896698.1 237812247 7886910 1947611..1948705 1 NC_012695.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1948705 cbiD 7886910 cbiD Burkholderia pseudomallei MSHR346 cobalt-precorrin-6A synthase YP_002896698.1 1947611 D 536230 CDS YP_002896699.1 237812248 7890914 1948702..1949436 1 NC_012695.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1949436 cobK 7890914 cobK Burkholderia pseudomallei MSHR346 cobalt-precorrin-6x reductase YP_002896699.1 1948702 D 536230 CDS YP_002896700.1 237812249 7888224 1949775..1950500 1 NC_012695.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1950500 cobM 7888224 cobM Burkholderia pseudomallei MSHR346 precorrin-4 C(11)-methyltransferase YP_002896700.1 1949775 D 536230 CDS YP_002896701.1 237812250 7888383 complement(1950579..1952144) 1 NC_012695.1 identified by match to protein family HMM PF02638; putative lipoprotein 1952144 7888383 GBP346_A1998 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896701.1 1950579 R 536230 CDS YP_002896702.1 237812251 7887815 complement(1952275..1953459) 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1953459 7887815 GBP346_A1999 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002896702.1 1952275 R 536230 CDS YP_002896703.1 237812252 7890895 1953583..1954077 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 1954077 7890895 GBP346_A2000 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002896703.1 1953583 D 536230 CDS YP_002896704.1 237812253 7889613 complement(1954424..1955641) 1 NC_012695.1 identified by match to protein family HMM PF01094; extracellular ligand-binding receptor 1955641 7889613 GBP346_A2001 Burkholderia pseudomallei MSHR346 extracellular ligand-binding receptor YP_002896704.1 1954424 R 536230 CDS YP_002896705.1 237812254 7888104 complement(1955759..1955947) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, MarR family 1955947 7888104 GBP346_A2002 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002896705.1 1955759 R 536230 CDS YP_002896706.1 237812255 7888516 complement(1955947..1956297) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulator, MarR family 1956297 7888516 GBP346_A2003 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002896706.1 1955947 R 536230 CDS YP_002896707.1 237812256 7889845 1956340..1956681 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative; hypothetical protein 1956681 7889845 GBP346_A2004 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896707.1 1956340 D 536230 CDS YP_002896708.1 237812257 7888827 complement(1956842..1957546) 1 NC_012695.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase family protein 1957546 7888827 GBP346_A2005 Burkholderia pseudomallei MSHR346 glutathione S-transferase family protein YP_002896708.1 1956842 R 536230 CDS YP_002896709.1 237812258 7887647 complement(1957830..1958750) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 1958750 7887647 GBP346_A2006 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896709.1 1957830 R 536230 CDS YP_002896710.1 237812259 7888691 1958848..1959297 1 NC_012695.1 identified by match to protein family HMM PF03928; PduO protein 1959297 7888691 GBP346_A2007 Burkholderia pseudomallei MSHR346 PduO protein YP_002896710.1 1958848 D 536230 CDS YP_002896711.1 237812260 7890485 1959294..1960088 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 1960088 7890485 GBP346_A2008 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002896711.1 1959294 D 536230 CDS YP_002896712.1 237812261 7887167 complement(1960132..1960320) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1960320 7887167 GBP346_A2009 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896712.1 1960132 R 536230 CDS YP_002896713.1 237812262 7890395 complement(1960320..1961261) 1 NC_012695.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 1961261 arcC 7890395 arcC Burkholderia pseudomallei MSHR346 carbamate kinase YP_002896713.1 1960320 R 536230 CDS YP_002896714.1 237812263 7887870 complement(1961347..1962357) 1 NC_012695.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 1962357 argF_2 7887870 argF_2 Burkholderia pseudomallei MSHR346 ornithine carbamoyltransferase YP_002896714.1 1961347 R 536230 CDS YP_002896715.1 237812264 7886733 complement(1962422..1963699) 1 NC_012695.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 1963699 arcA 7886733 arcA Burkholderia pseudomallei MSHR346 arginine deiminase YP_002896715.1 1962422 R 536230 CDS YP_002896716.1 237812265 7887261 complement(1963696..1965156) 1 NC_012695.1 identified by match to protein family HMM PF00324; match to protein family HMM TIGR00905; arginine/ornithine antiporter 1965156 7887261 GBP346_A2013 Burkholderia pseudomallei MSHR346 arginine/ornithine antiporter YP_002896716.1 1963696 R 536230 CDS YP_002896717.1 237812266 7886817 1965139..1965288 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1965288 7886817 GBP346_A2014 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896717.1 1965139 D 536230 CDS YP_002896718.1 237812267 7889096 complement(1965317..1965649) 1 NC_012695.1 hypothetical protein 1965649 7889096 GBP346_A2015 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896718.1 1965317 R 536230 CDS YP_002896719.1 237812268 7888088 1965636..1965800 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1965800 7888088 GBP346_A2016 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896719.1 1965636 D 536230 CDS YP_002896720.1 237812269 7890070 complement(1965919..1966836) 1 NC_012695.1 hypothetical protein 1966836 7890070 GBP346_A2017 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896720.1 1965919 R 536230 CDS YP_002896721.1 237812270 7890170 complement(1966872..1967690) 1 NC_012695.1 identified by match to protein family HMM PF00528; amine ABC transporter, permease protein 1967690 7890170 GBP346_A2018 Burkholderia pseudomallei MSHR346 amine ABC transporter, permease protein YP_002896721.1 1966872 R 536230 CDS YP_002896722.1 237812271 7889954 complement(1967687..1968625) 1 NC_012695.1 identified by match to protein family HMM PF00005; glycine betaine/carnitine/choline transport ATP-binding protein opuCA 1968625 7889954 GBP346_A2019 Burkholderia pseudomallei MSHR346 glycine betaine/carnitine/choline transport ATP-binding protein opuCA YP_002896722.1 1967687 R 536230 CDS YP_002896723.1 237812272 7887613 complement(1968622..1969842) 1 NC_012695.1 identified by match to protein family HMM PF00528; inner membrane ABC transporter permease protein YehY 1969842 7887613 GBP346_A2020 Burkholderia pseudomallei MSHR346 inner membrane ABC transporter permease protein YehY YP_002896723.1 1968622 R 536230 CDS YP_002896724.1 237812273 7888271 complement(1969839..1970777) 1 NC_012695.1 identified by match to protein family HMM PF04069; amine ABC transporter, periplasmic amine-binding protein 1970777 7888271 GBP346_A2021 Burkholderia pseudomallei MSHR346 amine ABC transporter, periplasmic amine-binding protein YP_002896724.1 1969839 R 536230 CDS YP_002896725.1 237812274 7888177 1971023..1971142 1 NC_012695.1 hypothetical protein 1971142 7888177 GBP346_A2022 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896725.1 1971023 D 536230 CDS YP_002896726.1 237812275 7887824 1971139..1971909 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF08241; match to protein family HMM PF08242; putative methyltransferase UbiE 1971909 7887824 GBP346_A2023 Burkholderia pseudomallei MSHR346 putative methyltransferase UbiE YP_002896726.1 1971139 D 536230 CDS YP_002896727.1 237812276 7889538 complement(1972218..1973621) 1 NC_012695.1 identified by match to protein family HMM PF07690; drug resistance transporter, EmrB/QacA family 1973621 7889538 GBP346_A2024 Burkholderia pseudomallei MSHR346 drug resistance transporter, EmrB/QacA family YP_002896727.1 1972218 R 536230 CDS YP_002896728.1 237812277 7890449 complement(1973698..1975674) 1 NC_012695.1 identified by match to protein family HMM PF00501; AMP-binding domain protein 1975674 7890449 GBP346_A2025 Burkholderia pseudomallei MSHR346 AMP-binding domain protein YP_002896728.1 1973698 R 536230 CDS YP_002896729.1 237812278 7890950 1976074..1976262 1 NC_012695.1 hypothetical protein 1976262 7890950 GBP346_A2026 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896729.1 1976074 D 536230 CDS YP_002896730.1 237812279 7888007 complement(1976299..1976586) 1 NC_012695.1 hypothetical protein 1976586 7888007 GBP346_A2027 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896730.1 1976299 R 536230 CDS YP_002896731.1 237812280 7888873 1976976..1978718 1 NC_012695.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1978718 7888873 GBP346_A2028 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002896731.1 1976976 D 536230 CDS YP_002896732.1 237812281 7887605 1978756..1979268 1 NC_012695.1 identified by match to protein family HMM PF01584; chemotaxis protein CheW 1979268 7887605 GBP346_A2029 Burkholderia pseudomallei MSHR346 chemotaxis protein CheW YP_002896732.1 1978756 D 536230 CDS YP_002896733.1 237812282 7890850 1979311..1979436 1 NC_012695.1 hypothetical protein 1979436 7890850 GBP346_A2030 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896733.1 1979311 D 536230 CDS YP_002896734.1 237812283 7888832 complement(1979459..1980397) 1 NC_012695.1 identified by match to protein family HMM PF00892; integral membrane protein DUF6 1980397 7888832 GBP346_A2031 Burkholderia pseudomallei MSHR346 integral membrane protein DUF6 YP_002896734.1 1979459 R 536230 CDS YP_002896735.1 237812284 7890431 complement(1980562..1981362) 1 NC_012695.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; transcriptional regulator, AraC family 1981362 7890431 GBP346_A2032 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002896735.1 1980562 R 536230 CDS YP_002896736.1 237812285 7889413 1981441..1981560 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 1981560 7889413 GBP346_A2033 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896736.1 1981441 D 536230 CDS YP_002896737.1 237812286 7889343 1981717..1982937 1 NC_012695.1 identified by match to protein family HMM PF00267; putative outer membrane porin 1982937 7889343 GBP346_A2034 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002896737.1 1981717 D 536230 CDS YP_002896738.1 237812287 7887796 1983168..1983440 1 NC_012695.1 hypothetical protein 1983440 7887796 GBP346_A2036 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896738.1 1983168 D 536230 CDS YP_002896739.1 237812288 7888673 complement(1983398..1985320) 1 NC_012695.1 identified by match to protein family HMM PF00975; syringopeptin synthetase C 1985320 7888673 GBP346_A2035 Burkholderia pseudomallei MSHR346 syringopeptin synthetase C YP_002896739.1 1983398 R 536230 CDS YP_002896740.1 237812289 7889489 1986268..1986492 1 NC_012695.1 identified by match to protein family HMM PF03621; MbtH domain protein 1986492 7889489 GBP346_A2037 Burkholderia pseudomallei MSHR346 MbtH domain protein YP_002896740.1 1986268 D 536230 CDS YP_002896741.1 237812290 7887453 1986479..1987363 1 NC_012695.1 identified by match to protein family HMM PF02373; JmjC domain protein 1987363 7887453 GBP346_A2038 Burkholderia pseudomallei MSHR346 JmjC domain protein YP_002896741.1 1986479 D 536230 CDS YP_002896742.1 237812291 7888330 1987425..1988435 1 NC_012695.1 identified by match to protein family HMM PF00155; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 1988435 7888330 GBP346_A2039 Burkholderia pseudomallei MSHR346 histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_002896742.1 1987425 D 536230 CDS YP_002896743.1 237812292 7889888 1988463..1989545 1 NC_012695.1 hypothetical protein 1989545 7889888 GBP346_A2040 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896743.1 1988463 D 536230 CDS YP_002896744.1 237812293 7890291 1989601..1990419 1 NC_012695.1 identified by match to protein family HMM PF00551; nonribosomal peptide synthetase 1990419 7890291 GBP346_A2041 Burkholderia pseudomallei MSHR346 nonribosomal peptide synthetase YP_002896744.1 1989601 D 536230 CDS YP_002896745.1 237812294 7889714 1990460..1991674 1 NC_012695.1 identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; argininosuccinate synthase 1991674 argG_2 7889714 argG_2 Burkholderia pseudomallei MSHR346 argininosuccinate synthase YP_002896745.1 1990460 D 536230 CDS YP_002896746.1 237812295 7887108 1991671..1993071 1 NC_012695.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase 1993071 argH_2 7887108 argH_2 Burkholderia pseudomallei MSHR346 argininosuccinate lyase YP_002896746.1 1991671 D 536230 CDS YP_002896747.1 237812296 7888077 1993089..1993985 1 NC_012695.1 identified by match to protein family HMM PF00288; putative kinase 1993985 7888077 GBP346_A2044 Burkholderia pseudomallei MSHR346 putative kinase YP_002896747.1 1993089 D 536230 CDS YP_002896748.1 237812297 7890613 1994039..1995271 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1995271 7890613 GBP346_A2045 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002896748.1 1994039 D 536230 CDS YP_002896749.1 237812298 7888302 1995268..1995909 1 NC_012695.1 hypothetical protein 1995909 7888302 GBP346_A2046 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896749.1 1995268 D 536230 CDS YP_002896750.1 237812299 7887195 1995906..1997033 1 NC_012695.1 identified by match to protein family HMM PF00291; cysteine synthase 1997033 7887195 GBP346_A2047 Burkholderia pseudomallei MSHR346 cysteine synthase YP_002896750.1 1995906 D 536230 CDS YP_002896751.1 237812300 7890679 1997068..1999770 1 NC_012695.1 identified by match to protein family HMM PF00206; match to protein family HMM PF02222; match to protein family HMM PF02655; argininosuccinate lyase 1999770 7890679 GBP346_A2048 Burkholderia pseudomallei MSHR346 argininosuccinate lyase YP_002896751.1 1997068 D 536230 CDS YP_002896752.1 237812301 7890619 1999813..2000973 1 NC_012695.1 identified by match to protein family HMM PF00202; match to protein family HMM PF01212; low-specificity L-threonine aldolase 2000973 ltaE 7890619 ltaE Burkholderia pseudomallei MSHR346 low-specificity L-threonine aldolase YP_002896752.1 1999813 D 536230 CDS YP_002896753.1 237812302 7890156 2000970..2001602 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2001602 7890156 GBP346_A2050 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002896753.1 2000970 D 536230 CDS YP_002896754.1 237812303 7889840 2001599..2020399 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733; non-ribosomal peptide synthase 2020399 7889840 GBP346_A2051 Burkholderia pseudomallei MSHR346 non-ribosomal peptide synthase YP_002896754.1 2001599 D 536230 CDS YP_002896755.1 237812304 7887987 2020405..2020524 1 NC_012695.1 hypothetical protein 2020524 7887987 GBP346_A2052 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896755.1 2020405 D 536230 CDS YP_002896756.1 237812305 7890868 2020490..2022211 1 NC_012695.1 identified by match to protein family HMM PF02543; carbamoyltransferase family protein 2022211 7890868 GBP346_A2053 Burkholderia pseudomallei MSHR346 carbamoyltransferase family protein YP_002896756.1 2020490 D 536230 CDS YP_002896757.1 237812306 7887651 2022336..2024708 1 NC_012695.1 identified by match to protein family HMM PF01804; family S45 unassigned peptidase 2024708 7887651 GBP346_A2054 Burkholderia pseudomallei MSHR346 family S45 unassigned peptidase YP_002896757.1 2022336 D 536230 CDS YP_002896758.1 237812307 7888703 complement(2024962..2025084) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2025084 7888703 GBP346_A2055 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896758.1 2024962 R 536230 CDS YP_002896759.1 237812308 7887668 complement(2025336..2025740) 1 NC_012695.1 putative non-ribosomal peptide synthetase 2025740 7887668 GBP346_A2056 Burkholderia pseudomallei MSHR346 putative non-ribosomal peptide synthetase YP_002896759.1 2025336 R 536230 CDS YP_002896760.1 237812309 7886783 complement(2026286..2026483) 1 NC_012695.1 hypothetical protein 2026483 7886783 GBP346_A2057 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896760.1 2026286 R 536230 CDS YP_002896761.1 237812310 7890268 complement(2026781..2028958) 1 NC_012695.1 identified by match to protein family HMM PF00657; match to protein family HMM PF01344; match to protein family HMM PF07646; match to protein family HMM PF09118; hypothetical protein 2028958 7890268 GBP346_A2058 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896761.1 2026781 R 536230 CDS YP_002896762.1 237812311 7888884 complement(2029546..2029911) 1 NC_012695.1 hypothetical protein 2029911 7888884 GBP346_A2059 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896762.1 2029546 R 536230 CDS YP_002896763.1 237812312 7888009 complement(2030039..2030191) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; TPR repeat protein 2030191 7888009 GBP346_A2060 Burkholderia pseudomallei MSHR346 TPR repeat protein YP_002896763.1 2030039 R 536230 CDS YP_002896764.1 237812313 7890845 complement(2030502..2031134) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; TPR repeat protein 2031134 7890845 GBP346_A2061 Burkholderia pseudomallei MSHR346 TPR repeat protein YP_002896764.1 2030502 R 536230 CDS YP_002896765.1 237812314 7889920 complement(2031562..2036313) 1 NC_012695.1 identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; hemagglutinin family protein 2036313 7889920 GBP346_A2062 Burkholderia pseudomallei MSHR346 hemagglutinin family protein YP_002896765.1 2031562 R 536230 CDS YP_002896766.1 237812315 7889293 2036594..2036758 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2036758 7889293 GBP346_A2063 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896766.1 2036594 D 536230 CDS YP_002896767.1 237812316 7889537 2038300..2038695 1 NC_012695.1 identified by match to protein family HMM PF01527; transposase 2038695 7889537 GBP346_A2064 Burkholderia pseudomallei MSHR346 transposase YP_002896767.1 2038300 D 536230 CDS YP_002896768.1 237812317 7887871 2039150..2039338 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; isrso10-transposase orfb protein 2039338 7887871 GBP346_A2065 Burkholderia pseudomallei MSHR346 isrso10-transposase orfb protein YP_002896768.1 2039150 D 536230 CDS YP_002896769.1 237812318 7890353 2039460..2040053 1 NC_012695.1 identified by match to protein family HMM PF00239; DNA-invertase 2040053 7890353 GBP346_A2066 Burkholderia pseudomallei MSHR346 DNA-invertase YP_002896769.1 2039460 D 536230 CDS YP_002896770.1 237812319 7887874 2040109..2040300 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2040300 7887874 GBP346_A2067 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896770.1 2040109 D 536230 CDS YP_002896771.1 237812320 7888296 complement(2040420..2040704) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 2040704 7888296 GBP346_A2068 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896771.1 2040420 R 536230 CDS YP_002896772.1 237812321 7888401 complement(2040953..2041075) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2041075 7888401 GBP346_A2069 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896772.1 2040953 R 536230 CDS YP_002896773.1 237812322 7888484 complement(2041090..2041203) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2041203 7888484 GBP346_A2070 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896773.1 2041090 R 536230 CDS YP_002896774.1 237812323 7887408 complement(2041340..2041618) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 2041618 7887408 GBP346_A2071 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896774.1 2041340 R 536230 CDS YP_002896775.1 237812324 7887411 2041575..2041733 1 NC_012695.1 hypothetical protein 2041733 7887411 GBP346_A2072 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896775.1 2041575 D 536230 CDS YP_002896776.1 237812325 7889455 2041740..2041994 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABK13593.1; site-specific recombinase, phage integrase family 2041994 7889455 GBP346_A2073 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002896776.1 2041740 D 536230 CDS YP_002896777.1 237812326 7886919 2042197..2042595 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family 2042595 7886919 GBP346_A2074 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002896777.1 2042197 D 536230 CDS YP_002896778.1 237812327 7888059 complement(2042863..2043507) 1 NC_012695.1 identified by match to protein family HMM PF00239; match to protein family HMM PF02796; recombinase 2043507 7888059 GBP346_A2075 Burkholderia pseudomallei MSHR346 recombinase YP_002896778.1 2042863 R 536230 CDS YP_002896779.1 237812328 7890741 2045546..2046214 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptonal regulator, GntR-family 2046214 7890741 GBP346_A2076 Burkholderia pseudomallei MSHR346 transcriptonal regulator, GntR-family YP_002896779.1 2045546 D 536230 CDS YP_002896780.1 237812329 7888481 2046417..2046836 1 NC_012695.1 identified by match to protein family HMM PF02371; transposase 2046836 7888481 GBP346_A2077 Burkholderia pseudomallei MSHR346 transposase YP_002896780.1 2046417 D 536230 CDS YP_002896781.1 237812330 7887533 complement(2046865..2046996) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2046996 7887533 GBP346_A2078 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896781.1 2046865 R 536230 CDS YP_002896782.1 237812331 7888038 complement(2047025..2047405) 1 NC_012695.1 ISDet2, transposase OrfB 2047405 7888038 GBP346_A2079 Burkholderia pseudomallei MSHR346 ISDet2, transposase OrfB YP_002896782.1 2047025 R 536230 CDS YP_002896783.1 237812332 7888361 2047973..2048284 1 NC_012695.1 hypothetical protein 2048284 7888361 GBP346_A2080 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896783.1 2047973 D 536230 CDS YP_002896784.1 237812333 7889059 2048318..2049229 1 NC_012695.1 identified by match to protein family HMM PF05114; hypothetical protein 2049229 7889059 GBP346_A2081 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896784.1 2048318 D 536230 CDS YP_002896785.1 237812334 7888212 2049219..2049998 1 NC_012695.1 hypothetical protein 2049998 7888212 GBP346_A2082 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896785.1 2049219 D 536230 CDS YP_002896786.1 237812335 7887504 2050004..2050507 1 NC_012695.1 identified by match to protein family HMM PF07681; DoxX family protein 2050507 7887504 GBP346_A2083 Burkholderia pseudomallei MSHR346 DoxX family protein YP_002896786.1 2050004 D 536230 CDS YP_002896787.1 237812336 7887123 2050504..2051214 1 NC_012695.1 identified by match to protein family HMM PF06532; hypothetical protein 2051214 7887123 GBP346_A2084 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896787.1 2050504 D 536230 CDS YP_002896788.1 237812337 7889776 complement(2051233..2051874) 1 NC_012695.1 identified by match to protein family HMM PF06532; hypothetical protein 2051874 7889776 GBP346_A2085 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896788.1 2051233 R 536230 CDS YP_002896789.1 237812338 7888464 complement(2051871..2052416) 1 NC_012695.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2052416 7888464 GBP346_A2086 Burkholderia pseudomallei MSHR346 RNA polymerase sigma factor YP_002896789.1 2051871 R 536230 CDS YP_002896790.1 237812339 7890721 2052918..2053124 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transposase mutator type 2053124 7890721 GBP346_A2087 Burkholderia pseudomallei MSHR346 transposase mutator type YP_002896790.1 2052918 D 536230 CDS YP_002896791.1 237812340 7888747 2053336..2053614 1 NC_012695.1 identified by similarity to GB:AAA25862.1; putative IS401 transposase subunit 2053614 7888747 GBP346_A2088 Burkholderia pseudomallei MSHR346 putative IS401 transposase subunit YP_002896791.1 2053336 D 536230 CDS YP_002896792.1 237812341 7890567 complement(2053646..2053789) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2053789 7890567 GBP346_A2089 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896792.1 2053646 R 536230 CDS YP_002896793.1 237812342 7889149 2053802..2054125 1 NC_012695.1 identified by match to protein family HMM PF00581; rhodanese domain protein 2054125 7889149 GBP346_A2090 Burkholderia pseudomallei MSHR346 rhodanese domain protein YP_002896793.1 2053802 D 536230 CDS YP_002896794.1 237812343 7887973 complement(2054178..2055458) 1 NC_012695.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2055458 7887973 GBP346_A2091 Burkholderia pseudomallei MSHR346 allantoate amidohydrolase YP_002896794.1 2054178 R 536230 CDS YP_002896795.1 237812344 7888137 complement(2055455..2056840) 1 NC_012695.1 identified by match to protein family HMM PF01979; amidohydrolase 2056840 7888137 GBP346_A2092 Burkholderia pseudomallei MSHR346 amidohydrolase YP_002896795.1 2055455 R 536230 CDS YP_002896796.1 237812345 7887727 2056940..2057830 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2057830 7887727 GBP346_A2093 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896796.1 2056940 D 536230 CDS YP_002896797.1 237812346 7887638 2058011..2059102 1 NC_012695.1 identified by match to protein family HMM PF06032; OsrF 2059102 7887638 GBP346_A2094 Burkholderia pseudomallei MSHR346 OsrF YP_002896797.1 2058011 D 536230 CDS YP_002896798.1 237812347 7889022 2059121..2060761 1 NC_012695.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2060761 hutU_1 7889022 hutU_1 Burkholderia pseudomallei MSHR346 urocanate hydratase YP_002896798.1 2059121 D 536230 CDS YP_002896799.1 237812348 7890857 2060798..2062120 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, metabolite:H+ symporter 2062120 7890857 GBP346_A2096 Burkholderia pseudomallei MSHR346 MFS transporter, metabolite:H+ symporter YP_002896799.1 2060798 D 536230 CDS YP_002896800.1 237812349 7887311 2062138..2063772 1 NC_012695.1 identified by match to protein family HMM PF00221; phenylalanine and histidine ammonia-lyase 2063772 7887311 GBP346_A2097 Burkholderia pseudomallei MSHR346 phenylalanine and histidine ammonia-lyase YP_002896800.1 2062138 D 536230 CDS YP_002896801.1 237812350 7888854 2063862..2064323 1 NC_012695.1 transposase 2064323 7888854 GBP346_A2098 Burkholderia pseudomallei MSHR346 transposase YP_002896801.1 2063862 D 536230 CDS YP_002896802.1 237812351 7890261 2064614..2065714 1 NC_012695.1 identified by match to protein family HMM PF00267; putative outer membrane porin 2065714 7890261 GBP346_A2099 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002896802.1 2064614 D 536230 CDS YP_002896803.1 237812352 7890773 complement(2065784..2066326) 1 NC_012695.1 integrase catalytic region 2066326 7890773 GBP346_A2100 Burkholderia pseudomallei MSHR346 integrase catalytic region YP_002896803.1 2065784 R 536230 CDS YP_002896804.1 237812353 7890504 complement(2066278..2066421) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; ISAfe7, transposase OrfA 2066421 7890504 GBP346_A2101 Burkholderia pseudomallei MSHR346 ISAfe7, transposase OrfA YP_002896804.1 2066278 R 536230 CDS YP_002896805.1 237812354 7888771 complement(2066542..2067792) 1 NC_012695.1 hypothetical protein 2067792 7888771 GBP346_A2102 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896805.1 2066542 R 536230 CDS YP_002896806.1 237812355 7889717 complement(2068411..2068527) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2068527 7889717 GBP346_A2103 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896806.1 2068411 R 536230 CDS YP_002896807.1 237812356 7890652 2069004..2069600 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative transposase for insertion sequence element 2069600 7890652 GBP346_A2104 Burkholderia pseudomallei MSHR346 putative transposase for insertion sequence element YP_002896807.1 2069004 D 536230 CDS YP_002896808.1 237812357 7886859 complement(2069815..2070528) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2070528 7886859 GBP346_A2105 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002896808.1 2069815 R 536230 CDS YP_002896809.1 237812358 7890113 complement(2070795..2070944) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2070944 7890113 GBP346_A2106 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896809.1 2070795 R 536230 CDS YP_002896810.1 237812359 7888646 complement(2071357..2071488) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2071488 7888646 GBP346_A2107 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896810.1 2071357 R 536230 CDS YP_002896811.1 237812360 7887925 complement(2071542..2072147) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; adenylyl-sulfate kinase 2072147 cysC_1 7887925 cysC_1 Burkholderia pseudomallei MSHR346 adenylyl-sulfate kinase YP_002896811.1 2071542 R 536230 CDS YP_002896812.1 237812361 7887877 2072196..2072378 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2072378 7887877 GBP346_A2109 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896812.1 2072196 D 536230 CDS YP_002896813.1 237812362 7887511 complement(2072425..2074050) 1 NC_012695.1 hypothetical protein 2074050 7887511 GBP346_A2110 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896813.1 2072425 R 536230 CDS YP_002896814.1 237812363 7888288 complement(2074092..2078447) 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; match to protein family HMM PF07723; match to protein family HMM PF08241; tetratricopeptide repeat family protein 2078447 7888288 GBP346_A2111 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat family protein YP_002896814.1 2074092 R 536230 CDS YP_002896815.1 237812364 7889682 complement(2078567..2079976) 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; HlyD family secretion protein 2079976 7889682 GBP346_A2112 Burkholderia pseudomallei MSHR346 HlyD family secretion protein YP_002896815.1 2078567 R 536230 CDS YP_002896816.1 237812365 7889633 complement(2079973..2082264) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, permease/ATP-binding protein 2082264 7889633 GBP346_A2113 Burkholderia pseudomallei MSHR346 ABC transporter, permease/ATP-binding protein YP_002896816.1 2079973 R 536230 CDS YP_002896817.1 237812366 7889966 complement(2082299..2083174) 1 NC_012695.1 sulfotransferase domain protein 2083174 7889966 GBP346_A2114 Burkholderia pseudomallei MSHR346 sulfotransferase domain protein YP_002896817.1 2082299 R 536230 CDS YP_002896818.1 237812367 7889557 complement(2083171..2083644) 1 NC_012695.1 hypothetical protein 2083644 7889557 GBP346_A2115 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896818.1 2083171 R 536230 CDS YP_002896819.1 237812368 7889224 complement(2083776..2093465) 1 NC_012695.1 identified by match to protein family HMM PF00353; match to protein family HMM PF01839; type I secretion target repeat protein 2093465 7889224 GBP346_A2116 Burkholderia pseudomallei MSHR346 type I secretion target repeat protein YP_002896819.1 2083776 R 536230 CDS YP_002896820.1 237812369 7889433 complement(2093576..2095486) 1 NC_012695.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 2095486 7889433 GBP346_A2117 Burkholderia pseudomallei MSHR346 outer membrane efflux protein YP_002896820.1 2093576 R 536230 CDS YP_002896821.1 237812370 7890526 complement(2095504..2096268) 1 NC_012695.1 identified by match to protein family HMM PF00691; OmpA family protein 2096268 7890526 GBP346_A2118 Burkholderia pseudomallei MSHR346 OmpA family protein YP_002896821.1 2095504 R 536230 CDS YP_002896822.1 237812371 7890585 complement(2096890..2097225) 1 NC_012695.1 identified by match to protein family HMM PF00816; BphA 2097225 7890585 GBP346_A2119 Burkholderia pseudomallei MSHR346 BphA YP_002896822.1 2096890 R 536230 CDS YP_002896823.1 237812372 7889531 complement(2097422..2097589) 1 NC_012695.1 hypothetical protein 2097589 7889531 GBP346_A2120 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896823.1 2097422 R 536230 CDS YP_002896824.1 237812373 7889932 complement(2098006..2098296) 1 NC_012695.1 hypothetical protein 2098296 7889932 GBP346_A2121 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896824.1 2098006 R 536230 CDS YP_002896825.1 237812374 7890405 complement(2098421..2099584) 1 NC_012695.1 identified by match to protein family HMM PF00267; putative outer membrane porin 2099584 7890405 GBP346_A2122 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002896825.1 2098421 R 536230 CDS YP_002896826.1 237812375 7888293 complement(2099683..2101143) 1 NC_012695.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780; succinate-semialdehyde dehydrogenase [NADP+] (ssdh) 2101143 7888293 GBP346_A2123 Burkholderia pseudomallei MSHR346 succinate-semialdehyde dehydrogenase [NADP+] (ssdh) YP_002896826.1 2099683 R 536230 CDS YP_002896827.1 237812376 7887423 complement(2101165..2101944) 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 2101944 7887423 GBP346_A2124 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002896827.1 2101165 R 536230 CDS YP_002896828.1 237812377 7888477 complement(2101910..2103001) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; spermidine/putrescine import ATP-binding protein PotA 2103001 7888477 GBP346_A2125 Burkholderia pseudomallei MSHR346 spermidine/putrescine import ATP-binding protein PotA YP_002896828.1 2101910 R 536230 CDS YP_002896829.1 237812378 7890731 complement(2103018..2103812) 1 NC_012695.1 identified by match to protein family HMM PF00528; putrescine transport system permease protein PotI 2103812 7890731 GBP346_A2126 Burkholderia pseudomallei MSHR346 putrescine transport system permease protein PotI YP_002896829.1 2103018 R 536230 CDS YP_002896830.1 237812379 7887799 complement(2103814..2104698) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, membrane spanning protein 2104698 7887799 GBP346_A2127 Burkholderia pseudomallei MSHR346 ABC transporter, membrane spanning protein YP_002896830.1 2103814 R 536230 CDS YP_002896831.1 237812380 7890474 complement(2104777..2105808) 1 NC_012695.1 identified by match to protein family HMM PF01547; ABC transporter, substrate binding protein 2105808 7890474 GBP346_A2128 Burkholderia pseudomallei MSHR346 ABC transporter, substrate binding protein YP_002896831.1 2104777 R 536230 CDS YP_002896832.1 237812381 7888844 complement(2105878..2106192) 1 NC_012695.1 identified by match to protein family HMM PF07978; nipsnap superfamily 2106192 7888844 GBP346_A2129 Burkholderia pseudomallei MSHR346 nipsnap superfamily YP_002896832.1 2105878 R 536230 CDS YP_002896833.1 237812382 7888554 complement(2106262..2107734) 1 NC_012695.1 identified by match to protein family HMM PF00171; betaine aldehyde dehydrogenase (badh) 2107734 7888554 GBP346_A2130 Burkholderia pseudomallei MSHR346 betaine aldehyde dehydrogenase (badh) YP_002896833.1 2106262 R 536230 CDS YP_002896834.1 237812383 7888364 complement(2107778..2108821) 1 NC_012695.1 identified by match to protein family HMM PF00296; glucose-6-phosphate dehydrogenase 2108821 7888364 GBP346_A2131 Burkholderia pseudomallei MSHR346 glucose-6-phosphate dehydrogenase YP_002896834.1 2107778 R 536230 CDS YP_002896835.1 237812384 7889436 complement(2108930..2109886) 1 NC_012695.1 identified by match to protein family HMM PF01613; nitrilotriacetate monooxygenase 2109886 7889436 GBP346_A2132 Burkholderia pseudomallei MSHR346 nitrilotriacetate monooxygenase YP_002896835.1 2108930 R 536230 CDS YP_002896836.1 237812385 7889713 complement(2109879..2110763) 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 2110763 7889713 GBP346_A2133 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002896836.1 2109879 R 536230 CDS YP_002896837.1 237812386 7889547 complement(2110753..2111340) 1 NC_012695.1 identified by match to protein family HMM PF06684; peptide synthase 2111340 7889547 GBP346_A2134 Burkholderia pseudomallei MSHR346 peptide synthase YP_002896837.1 2110753 R 536230 CDS YP_002896838.1 237812387 7887233 complement(2111637..2112407) 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 2112407 7887233 GBP346_A2135 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002896838.1 2111637 R 536230 CDS YP_002896839.1 237812388 7887312 2112655..2112828 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; transposase, mutator type 2112828 7887312 GBP346_A2136 Burkholderia pseudomallei MSHR346 transposase, mutator type YP_002896839.1 2112655 D 536230 CDS YP_002896840.1 237812389 7888315 2112937..2113089 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; ISPsy18, transposase 2113089 7888315 GBP346_A2137 Burkholderia pseudomallei MSHR346 ISPsy18, transposase YP_002896840.1 2112937 D 536230 CDS YP_002896841.1 237812390 7887456 complement(2113391..2113732) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; bacteriophage gp31 protein 2113732 7887456 GBP346_A2138 Burkholderia pseudomallei MSHR346 bacteriophage gp31 protein YP_002896841.1 2113391 R 536230 CDS YP_002896842.1 237812391 7887016 complement(2113823..2113990) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2113990 7887016 GBP346_A2139 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896842.1 2113823 R 536230 CDS YP_002896843.1 237812392 7890923 2114121..2114273 1 NC_012695.1 hypothetical protein 2114273 7890923 GBP346_A2140 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896843.1 2114121 D 536230 CDS YP_002896844.1 237812393 7886808 2114563..2115633 1 NC_012695.1 identified by match to protein family HMM PF01764; putative lipase 2115633 7886808 GBP346_A2141 Burkholderia pseudomallei MSHR346 putative lipase YP_002896844.1 2114563 D 536230 CDS YP_002896845.1 237812394 7890302 2115848..2116222 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 2116222 7890302 GBP346_A2142 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896845.1 2115848 D 536230 CDS YP_002896846.1 237812395 7887598 complement(2116225..2116599) 1 NC_012695.1 hypothetical protein 2116599 7887598 GBP346_A2143 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896846.1 2116225 R 536230 CDS YP_002896847.1 237812396 7887683 2116598..2116903 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2116903 7887683 GBP346_A2144 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896847.1 2116598 D 536230 CDS YP_002896848.1 237812397 7887319 complement(2116925..2117047) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2117047 7887319 GBP346_A2145 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896848.1 2116925 R 536230 CDS YP_002896849.1 237812398 7888874 complement(2117060..2117467) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2117467 7888874 GBP346_A2146 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896849.1 2117060 R 536230 CDS YP_002896850.1 237812399 7890272 complement(2117540..2118334) 1 NC_012695.1 identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase 2118334 7890272 GBP346_A2147 Burkholderia pseudomallei MSHR346 cyclic diguanylate phosphodiesterase YP_002896850.1 2117540 R 536230 CDS YP_002896851.1 237812400 7886799 complement(2118661..2121909) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; MrgS 2121909 7886799 GBP346_A2148 Burkholderia pseudomallei MSHR346 MrgS YP_002896851.1 2118661 R 536230 CDS YP_002896852.1 237812401 7890860 complement(2121909..2122574) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF08281; DNA-binding response regulator, LuxR family 2122574 7890860 GBP346_A2149 Burkholderia pseudomallei MSHR346 DNA-binding response regulator, LuxR family YP_002896852.1 2121909 R 536230 CDS YP_002896853.1 237812402 7890141 complement(2122876..2123337) 1 NC_012695.1 hypothetical protein 2123337 7890141 GBP346_A2150 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896853.1 2122876 R 536230 CDS YP_002896854.1 237812403 7888896 complement(2123343..2123846) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2123846 7888896 GBP346_A2151 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896854.1 2123343 R 536230 CDS YP_002896855.1 237812404 7886720 2124109..2124234 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2124234 7886720 GBP346_A2153 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896855.1 2124109 D 536230 CDS YP_002896856.1 237812405 7888139 complement(2124231..2124410) 1 NC_012695.1 hypothetical protein 2124410 7888139 GBP346_A2152 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896856.1 2124231 R 536230 CDS YP_002896857.1 237812406 7889256 complement(2124689..2128246) 1 NC_012695.1 identified by match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; Hep_Hag family protein 2128246 7889256 GBP346_A2154 Burkholderia pseudomallei MSHR346 Hep_Hag family protein YP_002896857.1 2124689 R 536230 CDS YP_002896858.1 237812407 7889866 complement(2128459..2128617) 1 NC_012695.1 hypothetical protein 2128617 7889866 GBP346_A2155 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896858.1 2128459 R 536230 CDS YP_002896859.1 237812408 7888974 2129073..2129321 1 NC_012695.1 hypothetical protein 2129321 7888974 GBP346_A2156 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896859.1 2129073 D 536230 CDS YP_002896860.1 237812409 7889016 complement(2129487..2130458) 1 NC_012695.1 identified by match to protein family HMM PF00419; type-1 fimbrial protein, A subunit 2130458 7889016 GBP346_A2157 Burkholderia pseudomallei MSHR346 type-1 fimbrial protein, A subunit YP_002896860.1 2129487 R 536230 CDS YP_002896861.1 237812410 7889330 complement(2130449..2133001) 1 NC_012695.1 identified by match to protein family HMM PF00577; fimbrial usher protein 2133001 fimD 7889330 fimD Burkholderia pseudomallei MSHR346 fimbrial usher protein YP_002896861.1 2130449 R 536230 CDS YP_002896862.1 237812411 7889146 complement(2133008..2133853) 1 NC_012695.1 identified by match to protein family HMM PF00345; match to protein family HMM PF02753; fimbrial assembly chaperone protein 2133853 7889146 GBP346_A2159 Burkholderia pseudomallei MSHR346 fimbrial assembly chaperone protein YP_002896862.1 2133008 R 536230 CDS YP_002896863.1 237812412 7890406 complement(2133875..2134405) 1 NC_012695.1 identified by match to protein family HMM PF00419; fimbrial protein 2134405 7890406 GBP346_A2160 Burkholderia pseudomallei MSHR346 fimbrial protein YP_002896863.1 2133875 R 536230 CDS YP_002896864.1 237812413 7886777 2135050..2135241 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2135241 7886777 GBP346_A2161 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896864.1 2135050 D 536230 CDS YP_002896865.1 237812414 7890173 complement(2135560..2136027) 1 NC_012695.1 identified by match to protein family HMM PF08670; mekhla domain protein 2136027 7890173 GBP346_A2162 Burkholderia pseudomallei MSHR346 mekhla domain protein YP_002896865.1 2135560 R 536230 CDS YP_002896866.1 237812415 7887936 2136129..2136320 1 NC_012695.1 hypothetical protein 2136320 7887936 GBP346_A2163 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896866.1 2136129 D 536230 CDS YP_002896867.1 237812416 7888436 2136287..2136412 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative lipoprotein 2136412 7888436 GBP346_A2164 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896867.1 2136287 D 536230 CDS YP_002896868.1 237812417 7889568 2136611..2137699 1 NC_012695.1 identified by match to protein family HMM TIGR01840; esterase, PHB depolymerase family 2137699 7889568 GBP346_A2165 Burkholderia pseudomallei MSHR346 esterase, PHB depolymerase family YP_002896868.1 2136611 D 536230 CDS YP_002896869.1 237812418 7889711 complement(2137856..2138005) 1 NC_012695.1 hypothetical protein 2138005 7889711 GBP346_A2166 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896869.1 2137856 R 536230 CDS YP_002896870.1 237812419 7890112 complement(2138002..2138772) 1 NC_012695.1 hypothetical protein 2138772 7890112 GBP346_A2167 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896870.1 2138002 R 536230 CDS YP_002896871.1 237812420 7886984 complement(2139402..2140079) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-containing 2140079 7886984 GBP346_A2168 Burkholderia pseudomallei MSHR346 alcohol dehydrogenase, iron-containing YP_002896871.1 2139402 R 536230 CDS YP_002896872.1 237812421 7889374 complement(2140076..2140276) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; alcohol dehydrogenase, iron-containing 2140276 7889374 GBP346_A2169 Burkholderia pseudomallei MSHR346 alcohol dehydrogenase, iron-containing YP_002896872.1 2140076 R 536230 CDS YP_002896873.1 237812422 7888305 complement(2140569..2140721) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2140721 7888305 GBP346_A2170 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896873.1 2140569 R 536230 CDS YP_002896874.1 237812423 7889009 2140722..2141270 1 NC_012695.1 hypothetical protein 2141270 7889009 GBP346_A2171 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896874.1 2140722 D 536230 CDS YP_002896875.1 237812424 7888143 2141399..2142097 1 NC_012695.1 hypothetical protein 2142097 7888143 GBP346_A2173 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896875.1 2141399 D 536230 CDS YP_002896876.1 237812425 7890429 complement(2142058..2142258) 1 NC_012695.1 hypothetical protein 2142258 7890429 GBP346_A2172 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896876.1 2142058 R 536230 CDS YP_002896877.1 237812426 7890927 2142235..2143677 1 NC_012695.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; alkylhalidase 2143677 7890927 GBP346_A2174 Burkholderia pseudomallei MSHR346 alkylhalidase YP_002896877.1 2142235 D 536230 CDS YP_002896878.1 237812427 7889729 2143763..2145097 1 NC_012695.1 identified by match to protein family HMM PF00999; sodium/hydrogen exchanger 2145097 7889729 GBP346_A2175 Burkholderia pseudomallei MSHR346 sodium/hydrogen exchanger YP_002896878.1 2143763 D 536230 CDS YP_002896879.1 237812428 7887997 2145104..2146102 1 NC_012695.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain protein 2146102 7887997 GBP346_A2176 Burkholderia pseudomallei MSHR346 Rieske (2Fe-2S) domain protein YP_002896879.1 2145104 D 536230 CDS YP_002896880.1 237812429 7889555 2146102..2147142 1 NC_012695.1 oxygenase 2147142 7889555 GBP346_A2177 Burkholderia pseudomallei MSHR346 oxygenase YP_002896880.1 2146102 D 536230 CDS YP_002896881.1 237812430 7887881 complement(2147505..2149217) 1 NC_012695.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 2149217 7887881 GBP346_A2178 Burkholderia pseudomallei MSHR346 dihydroxyacetone kinase YP_002896881.1 2147505 R 536230 CDS YP_002896882.1 237812431 7886814 complement(2149432..2149917) 1 NC_012695.1 hypothetical protein 2149917 7886814 GBP346_A2179 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896882.1 2149432 R 536230 CDS YP_002896883.1 237812432 7888502 complement(2150038..2151627) 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 2151627 7888502 GBP346_A2180 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002896883.1 2150038 R 536230 CDS YP_002896884.1 237812433 7889623 complement(2151802..2152542) 1 NC_012695.1 identified by match to protein family HMM PF01061; ABC-2 type transporter, permease protein 2152542 7889623 GBP346_A2181 Burkholderia pseudomallei MSHR346 ABC-2 type transporter, permease protein YP_002896884.1 2151802 R 536230 CDS YP_002896885.1 237812434 7886708 complement(2152539..2153543) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2153543 7886708 GBP346_A2182 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002896885.1 2152539 R 536230 CDS YP_002896886.1 237812435 7888938 complement(2153564..2154622) 1 NC_012695.1 identified by match to protein family HMM PF02424; ApbE family protein 2154622 7888938 GBP346_A2183 Burkholderia pseudomallei MSHR346 ApbE family protein YP_002896886.1 2153564 R 536230 CDS YP_002896887.1 237812436 7887676 2154644..2155006 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2155006 7887676 GBP346_A2184 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896887.1 2154644 D 536230 CDS YP_002896888.1 237812437 7889062 2155282..2157249 1 NC_012695.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 2157249 nosZ 7889062 nosZ Burkholderia pseudomallei MSHR346 nitrous-oxide reductase YP_002896888.1 2155282 D 536230 CDS YP_002896889.1 237812438 7889464 2157445..2158695 1 NC_012695.1 identified by match to protein family HMM PF05048; copper ABC transporter, periplasmic copper-binding protein 2158695 nosD 7889464 nosD Burkholderia pseudomallei MSHR346 copper ABC transporter, periplasmic copper-binding protein YP_002896889.1 2157445 D 536230 CDS YP_002896890.1 237812439 7889052 2158677..2159606 1 NC_012695.1 identified by match to protein family HMM PF00005; copper ABC transporter, ATP-binding protein 2159606 nosF 7889052 nosF Burkholderia pseudomallei MSHR346 copper ABC transporter, ATP-binding protein YP_002896890.1 2158677 D 536230 CDS YP_002896891.1 237812440 7888665 2159603..2160439 1 NC_012695.1 membrane protein NosY 2160439 7888665 GBP346_A2188 Burkholderia pseudomallei MSHR346 membrane protein NosY YP_002896891.1 2159603 D 536230 CDS YP_002896892.1 237812441 7889150 2160436..2160966 1 NC_012695.1 identified by match to protein family HMM PF05573; NosL 2160966 7889150 GBP346_A2189 Burkholderia pseudomallei MSHR346 NosL YP_002896892.1 2160436 D 536230 CDS YP_002896893.1 237812442 7888592 2160977..2161246 1 NC_012695.1 hypothetical protein 2161246 7888592 GBP346_A2190 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896893.1 2160977 D 536230 CDS YP_002896894.1 237812443 7890059 2161249..2161653 1 NC_012695.1 hypothetical protein 2161653 7890059 GBP346_A2191 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896894.1 2161249 D 536230 CDS YP_002896895.1 237812444 7889496 2161675..2162169 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 2162169 7889496 GBP346_A2192 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002896895.1 2161675 D 536230 CDS YP_002896896.1 237812445 7890589 2162228..2164360 1 NC_012695.1 identified by match to protein family HMM PF04205; regulatory protein NosR 2164360 nosR 7890589 nosR Burkholderia pseudomallei MSHR346 regulatory protein NosR YP_002896896.1 2162228 D 536230 CDS YP_002896897.1 237812446 7890132 2164357..2164695 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; phosphotransferase enzyme family protein 2164695 7890132 GBP346_A2194 Burkholderia pseudomallei MSHR346 phosphotransferase enzyme family protein YP_002896897.1 2164357 D 536230 CDS YP_002896898.1 237812447 7887196 2164767..2167196 1 NC_012695.1 identified by match to protein family HMM PF00924; transporter, MscS family 2167196 7887196 GBP346_A2196 Burkholderia pseudomallei MSHR346 transporter, MscS family YP_002896898.1 2164767 D 536230 CDS YP_002896899.1 237812448 7888080 complement(2167218..2167400) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2167400 7888080 GBP346_A2197 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896899.1 2167218 R 536230 CDS YP_002896900.1 237812449 7888749 2167391..2167678 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; putative lipoprotein 2167678 7888749 GBP346_A2198 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896900.1 2167391 D 536230 CDS YP_002896901.1 237812450 7890756 2167740..2168054 1 NC_012695.1 hypothetical protein 2168054 7890756 GBP346_A2199 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896901.1 2167740 D 536230 CDS YP_002896902.1 237812451 7886964 2168051..2168278 1 NC_012695.1 hypothetical protein 2168278 7886964 GBP346_A2200 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896902.1 2168051 D 536230 CDS YP_002896903.1 237812452 7886763 complement(2168487..2168852) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2168852 7886763 GBP346_A2201 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896903.1 2168487 R 536230 CDS YP_002896904.1 237812453 7888529 complement(2168861..2169259) 1 NC_012695.1 hypothetical protein 2169259 7888529 GBP346_A2202 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896904.1 2168861 R 536230 CDS YP_002896905.1 237812454 7886937 2169496..2169786 1 NC_012695.1 hypothetical protein 2169786 7886937 GBP346_A2203 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896905.1 2169496 D 536230 CDS YP_002896906.1 237812455 7886966 2169853..2170143 1 NC_012695.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 2170143 7886966 GBP346_A2204 Burkholderia pseudomallei MSHR346 YciI-like protein YP_002896906.1 2169853 D 536230 CDS YP_002896907.1 237812456 7887867 complement(2170151..2171128) 1 NC_012695.1 identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA 2171128 corA 7887867 corA Burkholderia pseudomallei MSHR346 magnesium and cobalt transport protein CorA YP_002896907.1 2170151 R 536230 CDS YP_002896908.1 237812457 7888862 2171333..2171494 1 NC_012695.1 identified by match to protein family HMM PF08173; match to protein family HMM TIGR02106; hypothetical protein 2171494 7888862 GBP346_A2206 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896908.1 2171333 D 536230 CDS YP_002896909.1 237812458 7890482 2171491..2172111 1 NC_012695.1 hypothetical protein 2172111 7890482 GBP346_A2207 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896909.1 2171491 D 536230 CDS YP_002896910.1 237812459 7888376 complement(2172314..2173414) 1 NC_012695.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02254; match to protein family HMM PF02737; match to protein family HMM PF03435; saccharopine dehydrogenase 2173414 lys 7888376 lys Burkholderia pseudomallei MSHR346 saccharopine dehydrogenase YP_002896910.1 2172314 R 536230 CDS YP_002896911.1 237812460 7887475 complement(2173493..2173627) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2173627 7887475 GBP346_A2209 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896911.1 2173493 R 536230 CDS YP_002896912.1 237812461 7890519 complement(2173721..2173987) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2173987 7890519 GBP346_A2210 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896912.1 2173721 R 536230 CDS YP_002896913.1 237812462 7889901 2174062..2175282 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 2175282 7889901 GBP346_A2212 Burkholderia pseudomallei MSHR346 transposase YP_002896913.1 2174062 D 536230 CDS YP_002896914.1 237812463 7887193 complement(2175245..2175547) 1 NC_012695.1 hypothetical protein 2175547 7887193 GBP346_A2211 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896914.1 2175245 R 536230 CDS YP_002896915.1 237812464 7889879 complement(2175544..2176626) 1 NC_012695.1 hypothetical protein 2176626 7889879 GBP346_A2213 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896915.1 2175544 R 536230 CDS YP_002896916.1 237812465 7887113 complement(2176681..2177262) 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 2177262 7887113 GBP346_A2214 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002896916.1 2176681 R 536230 CDS YP_002896917.1 237812466 7889850 complement(2177401..2177880) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; LtxA 2177880 7889850 GBP346_A2215 Burkholderia pseudomallei MSHR346 LtxA YP_002896917.1 2177401 R 536230 CDS YP_002896918.1 237812467 7890370 complement(2177877..2178143) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; amino acid adenylation:Thioester reductase 2178143 7890370 GBP346_A2216 Burkholderia pseudomallei MSHR346 amino acid adenylation:Thioester reductase YP_002896918.1 2177877 R 536230 CDS YP_002896919.1 237812468 7890472 complement(2178103..2178954) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; pristinamycin I synthase 3 and 4 2178954 7890472 GBP346_A2217 Burkholderia pseudomallei MSHR346 pristinamycin I synthase 3 and 4 YP_002896919.1 2178103 R 536230 CDS YP_002896920.1 237812469 7887532 2179072..2179587 1 NC_012695.1 hypothetical protein 2179587 7887532 GBP346_A2218 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896920.1 2179072 D 536230 CDS YP_002896921.1 237812470 7889539 complement(2180035..2181060) 1 NC_012695.1 polyhydroxybutyrate depolymerase 2181060 7889539 GBP346_A2219 Burkholderia pseudomallei MSHR346 polyhydroxybutyrate depolymerase YP_002896921.1 2180035 R 536230 CDS YP_002896922.1 237812471 7889691 2181236..2181685 1 NC_012695.1 hypothetical protein 2181685 7889691 GBP346_A2220 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896922.1 2181236 D 536230 CDS YP_002896923.1 237812472 7887583 complement(2182018..2182422) 1 NC_012695.1 hypothetical protein 2182422 7887583 GBP346_A2221 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896923.1 2182018 R 536230 CDS YP_002896924.1 237812473 7887664 complement(2182395..2183183) 1 NC_012695.1 membrane protein 2183183 7887664 GBP346_A2222 Burkholderia pseudomallei MSHR346 membrane protein YP_002896924.1 2182395 R 536230 CDS YP_002896925.1 237812474 7890696 complement(2183241..2184284) 1 NC_012695.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; transcriptional regulator, LacI family 2184284 7890696 GBP346_A2223 Burkholderia pseudomallei MSHR346 transcriptional regulator, LacI family YP_002896925.1 2183241 R 536230 CDS YP_002896926.1 237812475 7888892 complement(2184903..2185880) 1 NC_012695.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; 2-ketogluconate reductase (2KR) (2-ketoaldonatereductase) 2185880 7888892 GBP346_A2224 Burkholderia pseudomallei MSHR346 2-ketogluconate reductase (2KR) (2-ketoaldonatereductase) YP_002896926.1 2184903 R 536230 CDS YP_002896927.1 237812476 7887643 complement(2185885..2187162) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 2187162 7887643 GBP346_A2225 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002896927.1 2185885 R 536230 CDS YP_002896928.1 237812477 7887388 complement(2187247..2188236) 1 NC_012695.1 identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase 2188236 7887388 GBP346_A2226 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxygluconokinase YP_002896928.1 2187247 R 536230 CDS YP_002896929.1 237812478 7887993 complement(2188320..2189084) 1 NC_012695.1 identified by match to protein family HMM PF01261; AP endonuclease, family 2 2189084 7887993 GBP346_A2227 Burkholderia pseudomallei MSHR346 AP endonuclease, family 2 YP_002896929.1 2188320 R 536230 CDS YP_002896930.1 237812479 7888788 complement(2189200..2189349) 1 NC_012695.1 hypothetical protein 2189349 7888788 GBP346_A2228 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896930.1 2189200 R 536230 CDS YP_002896931.1 237812480 7890278 2189380..2189754 1 NC_012695.1 hypothetical protein 2189754 7890278 GBP346_A2229 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896931.1 2189380 D 536230 CDS YP_002896932.1 237812481 7888283 complement(2189816..2190718) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2190718 7888283 GBP346_A2230 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002896932.1 2189816 R 536230 CDS YP_002896933.1 237812482 7886852 2190829..2191899 1 NC_012695.1 identified by match to protein family HMM PF03601; match to protein family HMM TIGR00698; hypothetical protein 2191899 7886852 GBP346_A2231 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896933.1 2190829 D 536230 CDS YP_002896934.1 237812483 7890647 2192009..2193748 1 NC_012695.1 identified by match to protein family HMM PF00571; match to protein family HMM PF00654; putative voltage-gated ClC-type chloride channel ClcB 2193748 7890647 GBP346_A2232 Burkholderia pseudomallei MSHR346 putative voltage-gated ClC-type chloride channel ClcB YP_002896934.1 2192009 D 536230 CDS YP_002896935.1 237812484 7888584 complement(2194038..2194658) 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 2194658 7888584 GBP346_A2233 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002896935.1 2194038 R 536230 CDS YP_002896936.1 237812485 7886938 2194771..2195982 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 2195982 7886938 GBP346_A2234 Burkholderia pseudomallei MSHR346 efflux transporter, RND family, MFP subunit YP_002896936.1 2194771 D 536230 CDS YP_002896937.1 237812486 7887555 2195979..2199149 1 NC_012695.1 identified by match to protein family HMM PF00873; acriflavin resistance protein 2199149 7887555 GBP346_A2235 Burkholderia pseudomallei MSHR346 acriflavin resistance protein YP_002896937.1 2195979 D 536230 CDS YP_002896938.1 237812487 7886778 2199152..2201056 1 NC_012695.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; efflux transporter, outer membrane factor 2201056 7886778 GBP346_A2236 Burkholderia pseudomallei MSHR346 efflux transporter, outer membrane factor YP_002896938.1 2199152 D 536230 CDS YP_002896939.1 237812488 7890801 complement(2201105..2201443) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2201443 7890801 GBP346_A2237 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896939.1 2201105 R 536230 CDS YP_002896940.1 237812489 7887840 2201529..2202560 1 NC_012695.1 identified by match to protein family HMM PF00376; match to protein family HMM PF05583; match to protein family HMM PF09278; transcriptional regulator, MerR family/albicidin resistance protein 2202560 7887840 GBP346_A2238 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family/albicidin resistance protein YP_002896940.1 2201529 D 536230 CDS YP_002896941.1 237812490 7890423 complement(2202876..2203073) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2203073 7890423 GBP346_A2239 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896941.1 2202876 R 536230 CDS YP_002896942.1 237812491 7890822 complement(2203067..2203927) 1 NC_012695.1 hypothetical protein 2203927 7890822 GBP346_A2240 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896942.1 2203067 R 536230 CDS YP_002896943.1 237812492 7887708 complement(2203949..2204173) 1 NC_012695.1 hypothetical protein 2204173 7887708 GBP346_A2241 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896943.1 2203949 R 536230 CDS YP_002896944.1 237812493 7889332 complement(2204184..2204747) 1 NC_012695.1 hypothetical protein 2204747 7889332 GBP346_A2242 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896944.1 2204184 R 536230 CDS YP_002896945.1 237812494 7888470 complement(2205060..2206463) 1 NC_012695.1 identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF07728; match to protein family HMM PF08448; sigma-54 dependent transcriptional regulator 2206463 7888470 GBP346_A2243 Burkholderia pseudomallei MSHR346 sigma-54 dependent transcriptional regulator YP_002896945.1 2205060 R 536230 CDS YP_002896946.1 237812495 7887230 2206651..2207553 1 NC_012695.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2207553 7887230 GBP346_A2244 Burkholderia pseudomallei MSHR346 metallo-beta-lactamase family protein YP_002896946.1 2206651 D 536230 CDS YP_002896947.1 237812496 7890476 2207604..2209274 1 NC_012695.1 identified by match to protein family HMM PF04273; match to protein family HMM PF07992; match to protein family HMM TIGR01244; oxidoreductase, pyridine nucleotide-disulphide family 2209274 7890476 GBP346_A2245 Burkholderia pseudomallei MSHR346 oxidoreductase, pyridine nucleotide-disulphide family YP_002896947.1 2207604 D 536230 CDS YP_002896948.1 237812497 7889942 2209314..2210120 1 NC_012695.1 identified by match to protein family HMM PF01925; hypothetical protein 2210120 7889942 GBP346_A2246 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896948.1 2209314 D 536230 CDS YP_002896949.1 237812498 7888546 complement(2210372..2211190) 1 NC_012695.1 identified by match to protein family HMM PF00528; putrescine ABC transporter, permease protein PotI 2211190 7888546 GBP346_A2247 Burkholderia pseudomallei MSHR346 putrescine ABC transporter, permease protein PotI YP_002896949.1 2210372 R 536230 CDS YP_002896950.1 237812499 7886753 complement(2211187..2212050) 1 NC_012695.1 identified by match to protein family HMM PF00528; putrescine transport system permease protein PotH 2212050 7886753 GBP346_A2248 Burkholderia pseudomallei MSHR346 putrescine transport system permease protein PotH YP_002896950.1 2211187 R 536230 CDS YP_002896951.1 237812500 7886992 complement(2212113..2213273) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; putrescine ABC transporter, ATP-binding protein PotG 2213273 potG 7886992 potG Burkholderia pseudomallei MSHR346 putrescine ABC transporter, ATP-binding protein PotG YP_002896951.1 2212113 R 536230 CDS YP_002896952.1 237812501 7888200 complement(2213364..2214458) 1 NC_012695.1 identified by match to protein family HMM PF01547; putrescine ABC transporter, periplasmic putrescine-binding protein 2214458 potF_2 7888200 potF_2 Burkholderia pseudomallei MSHR346 putrescine ABC transporter, periplasmic putrescine-binding protein YP_002896952.1 2213364 R 536230 CDS YP_002896953.1 237812502 7890046 2214845..2216152 1 NC_012695.1 identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; mn2+/fe2+ transporter, nramp family 2216152 7890046 GBP346_A2251 Burkholderia pseudomallei MSHR346 mn2+/fe2+ transporter, nramp family YP_002896953.1 2214845 D 536230 CDS YP_002896954.1 237812503 7888934 2216157..2216402 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2216402 7888934 GBP346_A2252 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896954.1 2216157 D 536230 CDS YP_002896955.1 237812504 7889437 2216554..2216757 1 NC_012695.1 identified by match to protein family HMM PF06945; hypothetical protein 2216757 7889437 GBP346_A2253 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896955.1 2216554 D 536230 CDS YP_002896956.1 237812505 7888973 complement(2216883..2217467) 1 NC_012695.1 identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 2217467 7888973 GBP346_A2254 Burkholderia pseudomallei MSHR346 outer membrane protein, OmpW family YP_002896956.1 2216883 R 536230 CDS YP_002896957.1 237812506 7887272 complement(2217600..2218790) 1 NC_012695.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family 2218790 7887272 GBP346_A2255 Burkholderia pseudomallei MSHR346 oxidoreductase, 2-nitropropane dioxygenase family YP_002896957.1 2217600 R 536230 CDS YP_002896958.1 237812507 7889134 complement(2218989..2220425) 1 NC_012695.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 2220425 7889134 GBP346_A2256 Burkholderia pseudomallei MSHR346 aldehyde dehydrogenase YP_002896958.1 2218989 R 536230 CDS YP_002896959.1 237812508 7889629 2220741..2221376 1 NC_012695.1 hypothetical protein 2221376 7889629 GBP346_A2257 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896959.1 2220741 D 536230 CDS YP_002896960.1 237812509 7889943 complement(2221524..2223323) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2223323 7889943 GBP346_A2258 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002896960.1 2221524 R 536230 CDS YP_002896961.1 237812510 7888989 complement(2223574..2226066) 1 NC_012695.1 identified by match to protein family HMM PF05170; AsmA family protein 2226066 7888989 GBP346_A2259 Burkholderia pseudomallei MSHR346 AsmA family protein YP_002896961.1 2223574 R 536230 CDS YP_002896962.1 237812511 7888405 2226065..2226895 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2226895 7888405 GBP346_A2260 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002896962.1 2226065 D 536230 CDS YP_002896963.1 237812512 7890748 2226892..2227710 1 NC_012695.1 identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein 2227710 7890748 GBP346_A2261 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896963.1 2226892 D 536230 CDS YP_002896964.1 237812513 7890037 2228023..2228286 1 NC_012695.1 phosphotransferase enzyme family protein 2228286 7890037 GBP346_A2262 Burkholderia pseudomallei MSHR346 phosphotransferase enzyme family protein YP_002896964.1 2228023 D 536230 CDS YP_002896965.1 237812514 7890820 complement(2228363..2228908) 1 NC_012695.1 hypothetical protein 2228908 7890820 GBP346_A2263 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896965.1 2228363 R 536230 CDS YP_002896966.1 237812515 7890463 complement(2229201..2229719) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2229719 7890463 GBP346_A2264 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896966.1 2229201 R 536230 CDS YP_002896967.1 237812516 7889878 2229762..2230607 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 2230607 serB 7889878 serB Burkholderia pseudomallei MSHR346 phosphoserine phosphatase SerB YP_002896967.1 2229762 D 536230 CDS YP_002896968.1 237812517 7889240 complement(2230871..2232055) 1 NC_012695.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 2232055 metC 7889240 metC Burkholderia pseudomallei MSHR346 cystathionine beta-lyase YP_002896968.1 2230871 R 536230 CDS YP_002896969.1 237812518 7889585 complement(2232320..2232898) 1 NC_012695.1 hypothetical protein 2232898 7889585 GBP346_A2267 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896969.1 2232320 R 536230 CDS YP_002896970.1 237812519 7890908 complement(2232915..2234198) 1 NC_012695.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 2234198 7890908 GBP346_A2268 Burkholderia pseudomallei MSHR346 beta-ketothiolase YP_002896970.1 2232915 R 536230 CDS YP_002896971.1 237812520 7887755 complement(2234195..2235121) 1 NC_012695.1 identified by match to protein family HMM PF00294; kinase, PfkB family 2235121 7887755 GBP346_A2269 Burkholderia pseudomallei MSHR346 kinase, PfkB family YP_002896971.1 2234195 R 536230 CDS YP_002896972.1 237812521 7888846 complement(2235124..2236515) 1 NC_012695.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 2236515 rimO 7888846 rimO Burkholderia pseudomallei MSHR346 ribosomal protein S12 methylthiotransferase YP_002896972.1 2235124 R 536230 CDS YP_002896973.1 237812522 7890231 complement(2237099..2237671) 1 NC_012695.1 identified by match to protein family HMM PF05233; match to protein family HMM PF07879; match to protein family HMM TIGR01848; polyhydroxyalkanoate synthesis repressor PhaR 2237671 phaR 7890231 phaR Burkholderia pseudomallei MSHR346 polyhydroxyalkanoate synthesis repressor PhaR YP_002896973.1 2237099 R 536230 CDS YP_002896974.1 237812523 7889004 complement(2237808..2238548) 1 NC_012695.1 catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase 2238548 phbB 7889004 phbB Burkholderia pseudomallei MSHR346 acetyacetyl-CoA reductase YP_002896974.1 2237808 R 536230 CDS YP_002896975.1 237812524 7889590 complement(2238674..2239855) 1 NC_012695.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 2239855 7889590 GBP346_A2273 Burkholderia pseudomallei MSHR346 acetyl-CoA acetyltransferase YP_002896975.1 2238674 R 536230 CDS YP_002896976.1 237812525 7890453 complement(2239952..2241772) 1 NC_012695.1 identified by match to protein family HMM PF00561; match to protein family HMM PF07167; match to protein family HMM TIGR01838; poly-beta-hydroxybutyrate polymerase 2241772 phbC_1 7890453 phbC_1 Burkholderia pseudomallei MSHR346 poly-beta-hydroxybutyrate polymerase YP_002896976.1 2239952 R 536230 CDS YP_002896977.1 237812526 7888353 complement(2242301..2243137) 1 NC_012695.1 identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 2243137 7888353 GBP346_A2275 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896977.1 2242301 R 536230 CDS YP_002896978.1 237812527 7890582 complement(2243144..2244313) 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 2244313 7890582 GBP346_A2276 Burkholderia pseudomallei MSHR346 ribosomal large subunit pseudouridine synthase D YP_002896978.1 2243144 R 536230 CDS YP_002896979.1 237812528 7888453 2244367..2245209 1 NC_012695.1 identified by match to protein family HMM TIGR03302; competence lipoprotein ComL 2245209 7888453 GBP346_A2277 Burkholderia pseudomallei MSHR346 competence lipoprotein ComL YP_002896979.1 2244367 D 536230 CDS YP_002896980.1 237812529 7890292 complement(2245385..2247643) 1 NC_012695.1 helicase c2 2247643 7890292 GBP346_A2278 Burkholderia pseudomallei MSHR346 helicase c2 YP_002896980.1 2245385 R 536230 CDS YP_002896981.1 237812530 7889722 complement(2247706..2247921) 1 NC_012695.1 hypothetical protein 2247921 7889722 GBP346_A2279 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896981.1 2247706 R 536230 CDS YP_002896982.1 237812531 7890343 complement(2248030..2248779) 1 NC_012695.1 putative lipoprotein 2248779 7890343 GBP346_A2280 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002896982.1 2248030 R 536230 CDS YP_002896983.1 237812532 7889632 complement(2248790..2248912) 1 NC_012695.1 hypothetical protein 2248912 7889632 GBP346_A2281 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896983.1 2248790 R 536230 CDS YP_002896984.1 237812533 7890810 2248919..2251243 1 NC_012695.1 identified by match to protein family HMM PF00575; match to protein family HMM PF09371; tex domain protein 2251243 7890810 GBP346_A2282 Burkholderia pseudomallei MSHR346 tex domain protein YP_002896984.1 2248919 D 536230 CDS YP_002896985.1 237812534 7889103 complement(2251478..2253346) 1 NC_012695.1 identified by match to protein family HMM PF02705; potassium uptake protein 2253346 kup 7889103 kup Burkholderia pseudomallei MSHR346 potassium uptake protein YP_002896985.1 2251478 R 536230 CDS YP_002896986.1 237812535 7889158 2253335..2253529 1 NC_012695.1 hypothetical protein 2253529 7889158 GBP346_A2284 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896986.1 2253335 D 536230 CDS YP_002896987.1 237812536 7888982 complement(2253662..2254255) 1 NC_012695.1 identified by match to protein family HMM PF00156; phosphoribosyl transferase domain protein 2254255 7888982 GBP346_A2285 Burkholderia pseudomallei MSHR346 phosphoribosyl transferase domain protein YP_002896987.1 2253662 R 536230 CDS YP_002896988.1 237812537 7889401 complement(2254262..2255608) 1 NC_012695.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2255608 purA 7889401 purA Burkholderia pseudomallei MSHR346 adenylosuccinate synthetase YP_002896988.1 2254262 R 536230 CDS YP_002896989.1 237812538 7887249 complement(2255733..2256881) 1 NC_012695.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 2256881 hisZ 7887249 hisZ Burkholderia pseudomallei MSHR346 ATP phosphoribosyltransferase regulatory subunit YP_002896989.1 2255733 R 536230 CDS YP_002896990.1 237812539 7889068 complement(2256993..2257184) 1 NC_012695.1 hypothetical protein 2257184 7889068 GBP346_A2288 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896990.1 2256993 R 536230 CDS YP_002896991.1 237812540 7889136 complement(2257209..2258108) 1 NC_012695.1 identified by match to protein family HMM PF01145; match to protein family HMM TIGR01932; HflC protein 2258108 hflC 7889136 hflC Burkholderia pseudomallei MSHR346 HflC protein YP_002896991.1 2257209 R 536230 CDS YP_002896992.1 237812541 7888593 complement(2258125..2259489) 1 NC_012695.1 identified by match to protein family HMM PF01145; match to protein family HMM TIGR01933; HflK protein 2259489 7888593 GBP346_A2290 Burkholderia pseudomallei MSHR346 HflK protein YP_002896992.1 2258125 R 536230 CDS YP_002896993.1 237812542 7886834 complement(2259535..2260698) 1 NC_012695.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein HflX 2260698 hflX 7886834 hflX Burkholderia pseudomallei MSHR346 GTP-binding protein HflX YP_002896993.1 2259535 R 536230 CDS YP_002896994.1 237812543 7889098 complement(2260770..2261009) 1 NC_012695.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 2261009 hfq 7889098 hfq Burkholderia pseudomallei MSHR346 RNA-binding protein Hfq YP_002896994.1 2260770 R 536230 CDS YP_002896995.1 237812544 7889276 complement(2261144..2262526) 1 NC_012695.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2262526 engA 7889276 engA Burkholderia pseudomallei MSHR346 GTP-binding protein EngA YP_002896995.1 2261144 R 536230 CDS YP_002896996.1 237812545 7889913 2262499..2262621 1 NC_012695.1 hypothetical protein 2262621 7889913 GBP346_A2294 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896996.1 2262499 D 536230 CDS YP_002896997.1 237812546 7887055 complement(2262756..2263901) 1 NC_012695.1 identified by match to protein family HMM PF01011; match to protein family HMM TIGR03300; outer membrane assembly lipoprotein YfgL 2263901 yfgL 7887055 yfgL Burkholderia pseudomallei MSHR346 outer membrane assembly lipoprotein YfgL YP_002896997.1 2262756 R 536230 CDS YP_002896998.1 237812547 7887248 complement(2263946..2264575) 1 NC_012695.1 hypothetical protein 2264575 7887248 GBP346_A2296 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002896998.1 2263946 R 536230 CDS YP_002896999.1 237812548 7889752 complement(2264628..2265968) 1 NC_012695.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2265968 hisS 7889752 hisS Burkholderia pseudomallei MSHR346 histidyl-tRNA synthetase YP_002896999.1 2264628 R 536230 CDS YP_002897000.1 237812549 7890350 complement(2265987..2267237) 1 NC_012695.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2267237 ispG 7890350 ispG Burkholderia pseudomallei MSHR346 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002897000.1 2265987 R 536230 CDS YP_002897001.1 237812550 7887164 complement(2267381..2268391) 1 NC_012695.1 hypothetical protein 2268391 7887164 GBP346_A2299 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897001.1 2267381 R 536230 CDS YP_002897002.1 237812551 7890067 complement(2268611..2269747) 1 NC_012695.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM enzyme, Cfr family 2269747 7890067 GBP346_A2300 Burkholderia pseudomallei MSHR346 radical SAM enzyme, Cfr family YP_002897002.1 2268611 R 536230 CDS YP_002897003.1 237812552 7890600 complement(2269789..2270214) 1 NC_012695.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2270214 ndk 7890600 ndk Burkholderia pseudomallei MSHR346 nucleoside diphosphate kinase YP_002897003.1 2269789 R 536230 CDS YP_002897004.1 237812553 7888677 2270463..2271161 1 NC_012695.1 identified by match to protein family HMM PF01027; hypothetical protein 2271161 7888677 GBP346_A2302 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897004.1 2270463 D 536230 CDS YP_002897005.1 237812554 7888096 complement(2271256..2272713) 1 NC_012695.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 2272713 rumA 7888096 rumA Burkholderia pseudomallei MSHR346 23S rRNA 5-methyluridine methyltransferase YP_002897005.1 2271256 R 536230 CDS YP_002897006.1 237812555 7888147 2272731..2273591 1 NC_012695.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 2273591 7888147 GBP346_A2304 Burkholderia pseudomallei MSHR346 endonuclease/exonuclease/phosphatase family protein YP_002897006.1 2272731 D 536230 CDS YP_002897007.1 237812556 7889318 complement(2273780..2274556) 1 NC_012695.1 hypothetical protein 2274556 7889318 GBP346_A2305 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897007.1 2273780 R 536230 CDS YP_002897008.1 237812557 7888418 complement(2274564..2275643) 1 NC_012695.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 2275643 rpoS 7888418 rpoS Burkholderia pseudomallei MSHR346 RNA polymerase sigma factor RpoS YP_002897008.1 2274564 R 536230 CDS YP_002897009.1 237812558 7890434 complement(2275655..2276545) 1 NC_012695.1 identified by match to protein family HMM PF01476; match to protein family HMM PF01551; LysM domain/M23 peptidase domain protein 2276545 7890434 GBP346_A2307 Burkholderia pseudomallei MSHR346 LysM domain/M23 peptidase domain protein YP_002897009.1 2275655 R 536230 CDS YP_002897010.1 237812559 7890931 complement(2276557..2277525) 1 NC_012695.1 identified by match to protein family HMM PF01135; match to protein family HMM TIGR00080; protein-L-isoaspartate O-methyltransferase 2277525 7890931 GBP346_A2308 Burkholderia pseudomallei MSHR346 protein-L-isoaspartate O-methyltransferase YP_002897010.1 2276557 R 536230 CDS YP_002897011.1 237812560 7889129 complement(2277522..2278283) 1 NC_012695.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2278283 surE 7889129 surE Burkholderia pseudomallei MSHR346 stationary phase survival protein SurE YP_002897011.1 2277522 R 536230 CDS YP_002897012.1 237812561 7888519 2278308..2278436 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2278436 7888519 GBP346_A2311 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897012.1 2278308 D 536230 CDS YP_002897013.1 237812562 7889388 complement(2278388..2279593) 1 NC_012695.1 identified by match to protein family HMM PF02515; caib/baif family protein 2279593 7889388 GBP346_A2310 Burkholderia pseudomallei MSHR346 caib/baif family protein YP_002897013.1 2278388 R 536230 CDS YP_002897014.1 237812563 7887175 complement(2279663..2280265) 1 NC_012695.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2280265 recR 7887175 recR Burkholderia pseudomallei MSHR346 recombination protein RecR YP_002897014.1 2279663 R 536230 CDS YP_002897015.1 237812564 7889963 complement(2280297..2280623) 1 NC_012695.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 2280623 7889963 GBP346_A2313 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897015.1 2280297 R 536230 CDS YP_002897016.1 237812565 7890478 complement(2280718..2283195) 1 NC_012695.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 2283195 7890478 GBP346_A2314 Burkholderia pseudomallei MSHR346 DNA polymerase III subunits gamma and tau YP_002897016.1 2280718 R 536230 CDS YP_002897017.1 237812566 7890101 complement(2283192..2283335) 1 NC_012695.1 hypothetical protein 2283335 7890101 GBP346_A2315 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897017.1 2283192 R 536230 CDS YP_002897018.1 237812567 7887079 2283862..2284188 1 NC_012695.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 2284188 trxA 7887079 trxA Burkholderia pseudomallei MSHR346 thioredoxin YP_002897018.1 2283862 D 536230 CDS YP_002897019.1 237812568 7887225 2284195..2284320 1 NC_012695.1 hypothetical protein 2284320 7887225 GBP346_A2318 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897019.1 2284195 D 536230 CDS YP_002897020.1 237812569 7886933 2284384..2285646 1 NC_012695.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2285646 rho 7886933 rho Burkholderia pseudomallei MSHR346 transcription termination factor Rho YP_002897020.1 2284384 D 536230 CDS YP_002897021.1 237812570 7890371 2285816..2286283 1 NC_012695.1 identified by match to protein family HMM PF00376; transcriptional regulator, MerR family 2286283 7890371 GBP346_A2320 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family YP_002897021.1 2285816 D 536230 CDS YP_002897022.1 237812571 7890890 2286280..2287836 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 2287836 7890890 GBP346_A2321 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002897022.1 2286280 D 536230 CDS YP_002897023.1 237812572 7888830 2287879..2288724 1 NC_012695.1 identified by match to protein family HMM PF06167; hypothetical protein 2288724 7888830 GBP346_A2322 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897023.1 2287879 D 536230 CDS YP_002897024.1 237812573 7890838 2288939..2289202 1 NC_012695.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 2289202 rpmE2 7890838 rpmE2 Burkholderia pseudomallei MSHR346 50S ribosomal protein L31 type B YP_002897024.1 2288939 D 536230 CDS YP_002897025.1 237812574 7889336 2289355..2291172 1 NC_012695.1 hypothetical protein 2291172 7889336 GBP346_A2324 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897025.1 2289355 D 536230 CDS YP_002897026.1 237812575 7887536 2291176..2292531 1 NC_012695.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; mate efflux family protein 2292531 7887536 GBP346_A2325 Burkholderia pseudomallei MSHR346 mate efflux family protein YP_002897026.1 2291176 D 536230 CDS YP_002897027.1 237812576 7888041 2292683..2292889 1 NC_012695.1 resuscitation promoting factor 2292889 7888041 GBP346_A2326 Burkholderia pseudomallei MSHR346 resuscitation promoting factor YP_002897027.1 2292683 D 536230 CDS YP_002897028.1 237812577 7888156 complement(2292932..2293207) 1 NC_012695.1 identified by match to protein family HMM PF02627; 4-carboxymuconolactone decarboxylase family protein 2293207 7888156 GBP346_A2327 Burkholderia pseudomallei MSHR346 4-carboxymuconolactone decarboxylase family protein YP_002897028.1 2292932 R 536230 CDS YP_002897029.1 237812578 7890275 complement(2293279..2293773) 1 NC_012695.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278; transcriptional regulator, MerR family 2293773 7890275 GBP346_A2328 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family YP_002897029.1 2293279 R 536230 CDS YP_002897030.1 237812579 7890143 2294129..2294737 1 NC_012695.1 hypothetical protein 2294737 7890143 GBP346_A2329 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897030.1 2294129 D 536230 CDS YP_002897031.1 237812580 7887662 2294816..2295238 1 NC_012695.1 identified by match to protein family HMM PF06078; hypothetical protein 2295238 7887662 GBP346_A2330 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897031.1 2294816 D 536230 CDS YP_002897032.1 237812581 7890951 complement(2295465..2298062) 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; ATP-dependent chaperone ClpB 2298062 clpB 7890951 clpB Burkholderia pseudomallei MSHR346 ATP-dependent chaperone ClpB YP_002897032.1 2295465 R 536230 CDS YP_002897033.1 237812582 7890454 complement(2298156..2298269) 1 NC_012695.1 hypothetical protein 2298269 7890454 GBP346_A2332 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897033.1 2298156 R 536230 CDS YP_002897034.1 237812583 7887537 complement(2298266..2298763) 1 NC_012695.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; putative transcriptional regulator 2298763 7887537 GBP346_A2333 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002897034.1 2298266 R 536230 CDS YP_002897035.1 237812584 7890206 2298947..2299489 1 NC_012695.1 identified by match to protein family HMM PF01152; globin 2299489 7890206 GBP346_A2334 Burkholderia pseudomallei MSHR346 globin YP_002897035.1 2298947 D 536230 CDS YP_002897036.1 237812585 7886903 complement(2299817..2300305) 1 NC_012695.1 identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 2300305 moaE 7886903 moaE Burkholderia pseudomallei MSHR346 molybdopterin converting factor, subunit 2 YP_002897036.1 2299817 R 536230 CDS YP_002897037.1 237812586 7890681 complement(2300316..2300573) 1 NC_012695.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682; molybdopterin converting factor, subunit 1 2300573 moaD 7890681 moaD Burkholderia pseudomallei MSHR346 molybdopterin converting factor, subunit 1 YP_002897037.1 2300316 R 536230 CDS YP_002897038.1 237812587 7887913 complement(2300595..2301887) 1 NC_012695.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdenum cofactor biosynthesis protein MoeA 2301887 moeA 7887913 moeA Burkholderia pseudomallei MSHR346 molybdenum cofactor biosynthesis protein MoeA YP_002897038.1 2300595 R 536230 CDS YP_002897039.1 237812588 7887054 complement(2301863..2302654) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2302654 7887054 GBP346_A2338 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897039.1 2301863 R 536230 CDS YP_002897040.1 237812589 7887432 complement(2302664..2304115) 1 NC_012695.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2304115 thrC 7887432 thrC Burkholderia pseudomallei MSHR346 threonine synthase YP_002897040.1 2302664 R 536230 CDS YP_002897041.1 237812590 7888750 complement(2304123..2305451) 1 NC_012695.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2305451 7888750 GBP346_A2340 Burkholderia pseudomallei MSHR346 homoserine dehydrogenase YP_002897041.1 2304123 R 536230 CDS YP_002897042.1 237812591 7890766 complement(2305496..2306734) 1 NC_012695.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2306734 7890766 GBP346_A2341 Burkholderia pseudomallei MSHR346 aminotransferase AlaT YP_002897042.1 2305496 R 536230 CDS YP_002897043.1 237812592 7888506 2307073..2307447 1 NC_012695.1 identified by match to protein family HMM PF04430; hypothetical protein 2307447 7888506 GBP346_A2342 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897043.1 2307073 D 536230 CDS YP_002897044.1 237812593 7889768 2307616..2309322 1 NC_012695.1 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 2309322 7889768 GBP346_A2343 Burkholderia pseudomallei MSHR346 dolichyl-phosphate-mannose-protein mannosyltransferase family protein YP_002897044.1 2307616 D 536230 CDS YP_002897045.1 237812594 7889725 2309343..2309714 1 NC_012695.1 small multidrug resistance protein 2309714 7889725 GBP346_A2344 Burkholderia pseudomallei MSHR346 small multidrug resistance protein YP_002897045.1 2309343 D 536230 CDS YP_002897046.1 237812595 7887741 2309841..2310992 1 NC_012695.1 identified by match to protein family HMM PF01041; match to protein family HMM PF01212; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2310992 7887741 GBP346_A2345 Burkholderia pseudomallei MSHR346 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_002897046.1 2309841 D 536230 CDS YP_002897047.1 237812596 7888433 2310999..2312006 1 NC_012695.1 identified by match to protein family HMM PF00535; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 2312006 7888433 GBP346_A2346 Burkholderia pseudomallei MSHR346 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_002897047.1 2310999 D 536230 CDS YP_002897048.1 237812597 7888211 2312003..2312950 1 NC_012695.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; putative formyltransferase 2312950 arnA_1 7888211 arnA_1 Burkholderia pseudomallei MSHR346 putative formyltransferase YP_002897048.1 2312003 D 536230 CDS YP_002897049.1 237812598 7886941 2312947..2314002 1 NC_012695.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 2314002 arnA_2 7886941 arnA_2 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase family protein YP_002897049.1 2312947 D 536230 CDS YP_002897050.1 237812599 7887517 2314016..2314912 1 NC_012695.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 2314912 7887517 GBP346_A2349 Burkholderia pseudomallei MSHR346 polysaccharide deacetylase family protein YP_002897050.1 2314016 D 536230 CDS YP_002897051.1 237812600 7890300 2315002..2315463 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; bacterioferritin comigratory protein 2315463 7890300 GBP346_A2350 Burkholderia pseudomallei MSHR346 bacterioferritin comigratory protein YP_002897051.1 2315002 D 536230 CDS YP_002897052.1 237812601 7888625 complement(2315657..2315911) 1 NC_012695.1 hypothetical protein 2315911 7888625 GBP346_A2351 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897052.1 2315657 R 536230 CDS YP_002897053.1 237812602 7888877 2315954..2317588 1 NC_012695.1 identified by match to protein family HMM PF02562; PhoH family protein 2317588 7888877 GBP346_A2352 Burkholderia pseudomallei MSHR346 PhoH family protein YP_002897053.1 2315954 D 536230 CDS YP_002897054.1 237812603 7888356 2317593..2317781 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2317781 7888356 GBP346_A2353 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897054.1 2317593 D 536230 CDS YP_002897055.1 237812604 7887705 2317827..2319035 1 NC_012695.1 identified by match to protein family HMM PF00877; lipoprotein, NLP/P60 family 2319035 7887705 GBP346_A2354 Burkholderia pseudomallei MSHR346 lipoprotein, NLP/P60 family YP_002897055.1 2317827 D 536230 CDS YP_002897056.1 237812605 7888608 2319032..2319202 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2319202 7888608 GBP346_A2355 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897056.1 2319032 D 536230 CDS YP_002897057.1 237812606 7889497 complement(2319270..2320280) 1 NC_012695.1 identified by match to protein family HMM PF01384; phosphate transporter family protein 2320280 7889497 GBP346_A2356 Burkholderia pseudomallei MSHR346 phosphate transporter family protein YP_002897057.1 2319270 R 536230 CDS YP_002897058.1 237812607 7888517 complement(2320291..2320917) 1 NC_012695.1 identified by match to protein family HMM PF01865; phosphate transport regulator 2320917 7888517 GBP346_A2357 Burkholderia pseudomallei MSHR346 phosphate transport regulator YP_002897058.1 2320291 R 536230 CDS YP_002897059.1 237812608 7886920 complement(2321056..2322438) 1 NC_012695.1 unwinds double stranded DNA; replicative DNA helicase 2322438 dnaB 7886920 dnaB Burkholderia pseudomallei MSHR346 replicative DNA helicase YP_002897059.1 2321056 R 536230 CDS YP_002897060.1 237812609 7890169 complement(2322448..2322576) 1 NC_012695.1 hypothetical protein 2322576 7890169 GBP346_A2359 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897060.1 2322448 R 536230 CDS YP_002897061.1 237812610 7890592 complement(2322582..2323034) 1 NC_012695.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2323034 rplI 7890592 rplI Burkholderia pseudomallei MSHR346 50S ribosomal protein L9 YP_002897061.1 2322582 R 536230 CDS YP_002897062.1 237812611 7887069 complement(2323062..2323337) 1 NC_012695.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2323337 rpsR 7887069 rpsR Burkholderia pseudomallei MSHR346 30S ribosomal protein S18 YP_002897062.1 2323062 R 536230 CDS YP_002897063.1 237812612 7887779 complement(2323340..2323639) 1 NC_012695.1 primosomal replicatioN protein n 2323639 7887779 GBP346_A2362 Burkholderia pseudomallei MSHR346 primosomal replicatioN protein n YP_002897063.1 2323340 R 536230 CDS YP_002897064.1 237812613 7889761 complement(2323676..2324050) 1 NC_012695.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2324050 rpsF 7889761 rpsF Burkholderia pseudomallei MSHR346 30S ribosomal protein S6 YP_002897064.1 2323676 R 536230 CDS YP_002897065.1 237812614 7887199 complement(2324286..2325296) 1 NC_012695.1 hypothetical protein 2325296 7887199 GBP346_A2364 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897065.1 2324286 R 536230 CDS YP_002897066.1 237812615 7889405 complement(2325286..2325993) 1 NC_012695.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2325993 7889405 GBP346_A2365 Burkholderia pseudomallei MSHR346 RNA polymerase sigma factor YP_002897066.1 2325286 R 536230 CDS YP_002897067.1 237812616 7887402 2326008..2326136 1 NC_012695.1 hypothetical protein 2326136 7887402 GBP346_A2366 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897067.1 2326008 D 536230 CDS YP_002897068.1 237812617 7890381 2326199..2327119 1 NC_012695.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409; Ser/Thr protein phosphatase family protein 2327119 7890381 GBP346_A2367 Burkholderia pseudomallei MSHR346 Ser/Thr protein phosphatase family protein YP_002897068.1 2326199 D 536230 CDS YP_002897069.1 237812618 7889468 2327130..2327555 1 NC_012695.1 identified by match to protein family HMM PF00116; cytochrome c oxidase family protein 2327555 7889468 GBP346_A2368 Burkholderia pseudomallei MSHR346 cytochrome c oxidase family protein YP_002897069.1 2327130 D 536230 CDS YP_002897070.1 237812619 7888078 complement(2327692..2328603) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2328603 7888078 GBP346_A2369 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002897070.1 2327692 R 536230 CDS YP_002897071.1 237812620 7887170 2328765..2330540 1 NC_012695.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 2330540 gcl 7887170 gcl Burkholderia pseudomallei MSHR346 glyoxylate carboligase YP_002897071.1 2328765 D 536230 CDS YP_002897072.1 237812621 7890583 2330657..2331445 1 NC_012695.1 identified by match to protein family HMM PF01261; match to protein family HMM TIGR03234; hydroxypyruvate isomerase 2331445 hyi 7890583 hyi Burkholderia pseudomallei MSHR346 hydroxypyruvate isomerase YP_002897072.1 2330657 D 536230 CDS YP_002897073.1 237812622 7886987 2331543..2332448 1 NC_012695.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505; 2-hydroxy-3-oxopropionate reductase 2332448 7886987 GBP346_A2372 Burkholderia pseudomallei MSHR346 2-hydroxy-3-oxopropionate reductase YP_002897073.1 2331543 D 536230 CDS YP_002897074.1 237812623 7889996 2332530..2333168 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2333168 7889996 GBP346_A2373 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897074.1 2332530 D 536230 CDS YP_002897075.1 237812624 7890410 2333181..2333651 1 NC_012695.1 identified by match to protein family HMM PF01476; LysM domain/BON superfamily protein 2333651 7890410 GBP346_A2375 Burkholderia pseudomallei MSHR346 LysM domain/BON superfamily protein YP_002897075.1 2333181 D 536230 CDS YP_002897076.1 237812625 7888357 complement(2333612..2333830) 1 NC_012695.1 hypothetical protein 2333830 7888357 GBP346_A2374 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897076.1 2333612 R 536230 CDS YP_002897077.1 237812626 7887190 complement(2333827..2334870) 1 NC_012695.1 identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase (L-asparagine amidohydrolase) (L-ASNase) 2334870 7887190 GBP346_A2376 Burkholderia pseudomallei MSHR346 L-asparaginase (L-asparagine amidohydrolase) (L-ASNase) YP_002897077.1 2333827 R 536230 CDS YP_002897078.1 237812627 7890212 2334847..2335371 1 NC_012695.1 hypothetical protein 2335371 7890212 GBP346_A2377 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897078.1 2334847 D 536230 CDS YP_002897079.1 237812628 7890580 2335368..2335658 1 NC_012695.1 identified by match to protein family HMM PF07769; phosphate starvation-inducible protein PsiF 2335658 7890580 GBP346_A2378 Burkholderia pseudomallei MSHR346 phosphate starvation-inducible protein PsiF YP_002897079.1 2335368 D 536230 CDS YP_002897080.1 237812629 7888060 2335865..2336344 1 NC_012695.1 hypothetical protein 2336344 7888060 GBP346_A2380 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897080.1 2335865 D 536230 CDS YP_002897081.1 237812630 7889701 complement(2336338..2336481) 1 NC_012695.1 hypothetical protein 2336481 7889701 GBP346_A2379 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897081.1 2336338 R 536230 CDS YP_002897082.1 237812631 7887177 2336582..2337169 1 NC_012695.1 putative lipoprotein 2337169 7887177 GBP346_A2381 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897082.1 2336582 D 536230 CDS YP_002897083.1 237812632 7890345 complement(2337378..2338442) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 2338442 7890345 GBP346_A2382 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002897083.1 2337378 R 536230 CDS YP_002897084.1 237812633 7887608 complement(2338819..2339997) 1 NC_012695.1 SMC domain protein 2339997 7887608 GBP346_A2383 Burkholderia pseudomallei MSHR346 SMC domain protein YP_002897084.1 2338819 R 536230 CDS YP_002897085.1 237812634 7887472 complement(2340250..2341437) 1 NC_012695.1 identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 2341437 7887472 GBP346_A2384 Burkholderia pseudomallei MSHR346 mechanosensitive ion channel family protein YP_002897085.1 2340250 R 536230 CDS YP_002897086.1 237812635 7889676 complement(2341504..2341857) 1 NC_012695.1 hypothetical protein 2341857 7889676 GBP346_A2385 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897086.1 2341504 R 536230 CDS YP_002897087.1 237812636 7887971 complement(2341931..2342653) 1 NC_012695.1 identified by match to protein family HMM PF00023; ankyrin repeat protein 2342653 7887971 GBP346_A2386 Burkholderia pseudomallei MSHR346 ankyrin repeat protein YP_002897087.1 2341931 R 536230 CDS YP_002897088.1 237812637 7888440 complement(2342664..2343473) 1 NC_012695.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; hydrolase, TatD family 2343473 7888440 GBP346_A2387 Burkholderia pseudomallei MSHR346 hydrolase, TatD family YP_002897088.1 2342664 R 536230 CDS YP_002897089.1 237812638 7887630 complement(2343549..2344055) 1 NC_012695.1 identified by match to protein family HMM PF00583; phosphinothricin acetyltransferase 2344055 7887630 GBP346_A2388 Burkholderia pseudomallei MSHR346 phosphinothricin acetyltransferase YP_002897089.1 2343549 R 536230 CDS YP_002897090.1 237812639 7886906 complement(2344098..2345132) 1 NC_012695.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2345132 7886906 GBP346_A2389 Burkholderia pseudomallei MSHR346 DNA polymerase III subunit delta' YP_002897090.1 2344098 R 536230 CDS YP_002897091.1 237812640 7888350 complement(2345152..2345772) 1 NC_012695.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2345772 tmk 7888350 tmk Burkholderia pseudomallei MSHR346 thymidylate kinase YP_002897091.1 2345152 R 536230 CDS YP_002897092.1 237812641 7888452 complement(2345773..2346792) 1 NC_012695.1 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; aminodeoxychorismate lyase 2346792 7888452 GBP346_A2391 Burkholderia pseudomallei MSHR346 aminodeoxychorismate lyase YP_002897092.1 2345773 R 536230 CDS YP_002897093.1 237812642 7887214 2346871..2347917 1 NC_012695.1 identified by match to protein family HMM TIGR03317; glycine cleavage T-protein 2347917 7887214 GBP346_A2392 Burkholderia pseudomallei MSHR346 glycine cleavage T-protein YP_002897093.1 2346871 D 536230 CDS YP_002897094.1 237812643 7887847 2347988..2348839 1 NC_012695.1 identified by match to protein family HMM PF05742; hypothetical protein 2348839 7887847 GBP346_A2393 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897094.1 2347988 D 536230 CDS YP_002897095.1 237812644 7890060 complement(2348875..2349315) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2349315 7890060 GBP346_A2394 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897095.1 2348875 R 536230 CDS YP_002897096.1 237812645 7890471 complement(2349687..2350646) 1 NC_012695.1 identified by match to protein family HMM PF07859; thermophilic carboxylesterase Est2 2350646 7890471 GBP346_A2395 Burkholderia pseudomallei MSHR346 thermophilic carboxylesterase Est2 YP_002897096.1 2349687 R 536230 CDS YP_002897097.1 237812646 7889139 complement(2350752..2351750) 1 NC_012695.1 identified by match to protein family HMM PF00107; putative NADP-dependent oxidoreductase yncb 2351750 7889139 GBP346_A2396 Burkholderia pseudomallei MSHR346 putative NADP-dependent oxidoreductase yncb YP_002897097.1 2350752 R 536230 CDS YP_002897098.1 237812647 7887255 complement(2351842..2352324) 1 NC_012695.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase superfamily protein 2352324 7887255 GBP346_A2397 Burkholderia pseudomallei MSHR346 thioesterase superfamily protein YP_002897098.1 2351842 R 536230 CDS YP_002897099.1 237812648 7890938 complement(2352321..2352635) 1 NC_012695.1 identified by match to protein family HMM PF03992; match to protein family HMM PF07876; stress responsive A/B barrel domain protein 2352635 7890938 GBP346_A2398 Burkholderia pseudomallei MSHR346 stress responsive A/B barrel domain protein YP_002897099.1 2352321 R 536230 CDS YP_002897100.1 237812649 7888640 complement(2353042..2353299) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2353299 7888640 GBP346_A2399 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897100.1 2353042 R 536230 CDS YP_002897101.1 237812650 7890223 2353389..2353853 1 NC_012695.1 hypothetical protein 2353853 7890223 GBP346_A2400 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897101.1 2353389 D 536230 CDS YP_002897102.1 237812651 7889396 complement(2354218..2355396) 1 NC_012695.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2355396 7889396 GBP346_A2401 Burkholderia pseudomallei MSHR346 acetyl-CoA acetyltransferase YP_002897102.1 2354218 R 536230 CDS YP_002897103.1 237812652 7890789 complement(2355455..2356093) 1 NC_012695.1 identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 2356093 7890789 GBP346_A2402 Burkholderia pseudomallei MSHR346 pyrazinamidase/nicotinamidase YP_002897103.1 2355455 R 536230 CDS YP_002897104.1 237812653 7889086 complement(2356135..2358219) 1 NC_012695.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; peroxisomal bifunctional enzyme 2358219 7889086 GBP346_A2403 Burkholderia pseudomallei MSHR346 peroxisomal bifunctional enzyme YP_002897104.1 2356135 R 536230 CDS YP_002897105.1 237812654 7887809 complement(2358275..2358394) 1 NC_012695.1 hypothetical protein 2358394 7887809 GBP346_A2404 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897105.1 2358275 R 536230 CDS YP_002897106.1 237812655 7888421 complement(2358471..2360111) 1 NC_012695.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2360111 7888421 GBP346_A2405 Burkholderia pseudomallei MSHR346 long-chain-fatty-acid--CoA ligase YP_002897106.1 2358471 R 536230 CDS YP_002897107.1 237812656 7887339 2360227..2361804 1 NC_012695.1 identified by match to protein family HMM PF02696; hypothetical protein 2361804 7887339 GBP346_A2406 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897107.1 2360227 D 536230 CDS YP_002897108.1 237812657 7890550 2361801..2362286 1 NC_012695.1 identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2362286 msrB 7890550 msrB Burkholderia pseudomallei MSHR346 methionine-R-sulfoxide reductase YP_002897108.1 2361801 D 536230 CDS YP_002897109.1 237812658 7889959 2362379..2362909 1 NC_012695.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2362909 ispZ 7889959 ispZ Burkholderia pseudomallei MSHR346 intracellular septation protein A YP_002897109.1 2362379 D 536230 CDS YP_002897110.1 237812659 7887615 2362906..2363226 1 NC_012695.1 identified by match to protein family HMM PF01722; BolA/YrbA family protein 2363226 7887615 GBP346_A2409 Burkholderia pseudomallei MSHR346 BolA/YrbA family protein YP_002897110.1 2362906 D 536230 CDS YP_002897111.1 237812660 7888967 2363251..2364030 1 NC_012695.1 identified by match to protein family HMM PF00639; PpiC-type peptidyl-prolyl cis-trans isomerase 2364030 7888967 GBP346_A2410 Burkholderia pseudomallei MSHR346 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002897111.1 2363251 D 536230 CDS YP_002897112.1 237812661 7890216 complement(2364128..2364661) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2364661 7890216 GBP346_A2411 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897112.1 2364128 R 536230 CDS YP_002897113.1 237812662 7889118 complement(2364666..2368736) 1 NC_012695.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2368736 purL 7889118 purL Burkholderia pseudomallei MSHR346 phosphoribosylformylglycinamidine synthase YP_002897113.1 2364666 R 536230 CDS YP_002897114.1 237812663 7888930 complement(2368907..2369020) 1 NC_012695.1 hypothetical protein 2369020 7888930 GBP346_A2413 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897114.1 2368907 R 536230 CDS YP_002897115.1 237812664 7889910 2368992..2370296 1 NC_012695.1 identified by match to protein family HMM PF01266; D-amino-acid dehydrogenase 2370296 7889910 GBP346_A2414 Burkholderia pseudomallei MSHR346 D-amino-acid dehydrogenase YP_002897115.1 2368992 D 536230 CDS YP_002897116.1 237812665 7888036 2370344..2371939 1 NC_012695.1 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; nitric-oxide reductase subunit C 2371939 7888036 GBP346_A2416 Burkholderia pseudomallei MSHR346 nitric-oxide reductase subunit C YP_002897116.1 2370344 D 536230 CDS YP_002897117.1 237812666 7890783 complement(2371931..2372086) 1 NC_012695.1 hypothetical protein 2372086 7890783 GBP346_A2415 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897117.1 2371931 R 536230 CDS YP_002897118.1 237812667 7887359 2372042..2373664 1 NC_012695.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2373664 pgi 7887359 pgi Burkholderia pseudomallei MSHR346 glucose-6-phosphate isomerase YP_002897118.1 2372042 D 536230 CDS YP_002897119.1 237812668 7887675 complement(2373957..2374682) 1 NC_012695.1 identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein LolD 2374682 7887675 GBP346_A2418 Burkholderia pseudomallei MSHR346 lipoprotein-releasing system ATP-binding protein LolD YP_002897119.1 2373957 R 536230 CDS YP_002897120.1 237812669 7890152 2374666..2375346 1 NC_012695.1 identified by match to protein family HMM PF00657; putative acyl-CoA thioesterase 2375346 7890152 GBP346_A2419 Burkholderia pseudomallei MSHR346 putative acyl-CoA thioesterase YP_002897120.1 2374666 D 536230 CDS YP_002897121.1 237812670 7888448 complement(2375373..2375549) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2375549 7888448 GBP346_A2420 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897121.1 2375373 R 536230 CDS YP_002897122.1 237812671 7890926 complement(2375726..2377660) 1 NC_012695.1 identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase D 2377660 7890926 GBP346_A2421 Burkholderia pseudomallei MSHR346 peptidyl-prolyl cis-trans isomerase D YP_002897122.1 2375726 R 536230 CDS YP_002897123.1 237812672 7889189 complement(2378391..2378519) 1 NC_012695.1 hypothetical protein 2378519 7889189 GBP346_A2423 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897123.1 2378391 R 536230 CDS YP_002897124.1 237812673 7888905 complement(2378522..2378773) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 4-carboxymuconolactone decarboxylase domain protein 2378773 7888905 GBP346_A2424 Burkholderia pseudomallei MSHR346 4-carboxymuconolactone decarboxylase domain protein YP_002897124.1 2378522 R 536230 CDS YP_002897125.1 237812674 7887991 2378932..2379168 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2379168 7887991 GBP346_A2425 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897125.1 2378932 D 536230 CDS YP_002897126.1 237812675 7888689 complement(2379255..2379452) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2379452 7888689 GBP346_A2426 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897126.1 2379255 R 536230 CDS YP_002897127.1 237812676 7889680 complement(2379456..2379587) 1 NC_012695.1 hypothetical protein 2379587 7889680 GBP346_A2427 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897127.1 2379456 R 536230 CDS YP_002897128.1 237812677 7889885 complement(2379717..2380211) 1 NC_012695.1 hypothetical protein 2380211 7889885 GBP346_A2428 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897128.1 2379717 R 536230 CDS YP_002897129.1 237812678 7887715 2380594..2380923 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; RedA 2380923 7887715 GBP346_A2429 Burkholderia pseudomallei MSHR346 RedA YP_002897129.1 2380594 D 536230 CDS YP_002897130.1 237812679 7889199 complement(2381436..2381597) 1 NC_012695.1 hypothetical protein 2381597 7889199 GBP346_A2431 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897130.1 2381436 R 536230 CDS YP_002897131.1 237812680 7886734 complement(2381727..2381873) 1 NC_012695.1 hypothetical protein 2381873 7886734 GBP346_A2432 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897131.1 2381727 R 536230 CDS YP_002897132.1 237812681 7888619 complement(2381954..2384371) 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; endopeptidase LA 2384371 lon 7888619 lon Burkholderia pseudomallei MSHR346 endopeptidase LA YP_002897132.1 2381954 R 536230 CDS YP_002897133.1 237812682 7889967 complement(2384393..2384560) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2384560 7889967 GBP346_A2434 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897133.1 2384393 R 536230 CDS YP_002897134.1 237812683 7887271 complement(2384567..2385838) 1 NC_012695.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2385838 clpX 7887271 clpX Burkholderia pseudomallei MSHR346 ATP-dependent protease ATP-binding subunit ClpX YP_002897134.1 2384567 R 536230 CDS YP_002897135.1 237812684 7887766 complement(2385999..2386652) 1 NC_012695.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2386652 clpP 7887766 clpP Burkholderia pseudomallei MSHR346 ATP-dependent Clp protease proteolytic subunit YP_002897135.1 2385999 R 536230 CDS YP_002897136.1 237812685 7890319 complement(2386787..2388136) 1 NC_012695.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2388136 tig 7890319 tig Burkholderia pseudomallei MSHR346 trigger factor YP_002897136.1 2386787 R 536230 CDS YP_002897137.1 237812686 7890133 2388185..2388472 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; glycerate kinase 1 2388472 7890133 GBP346_A2438 Burkholderia pseudomallei MSHR346 glycerate kinase 1 YP_002897137.1 2388185 D 536230 CDS YP_002897138.1 237812687 7886809 2388589..2389752 1 NC_012695.1 identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2389752 7886809 GBP346_A2439 Burkholderia pseudomallei MSHR346 glycerate kinase YP_002897138.1 2388589 D 536230 CDS YP_002897139.1 237812688 7890716 2389855..2390304 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 2390304 7890716 GBP346_A2440 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002897139.1 2389855 D 536230 CDS YP_002897140.1 237812689 7889130 complement(2390339..2390695) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2390695 7889130 GBP346_A2441 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897140.1 2390339 R 536230 CDS YP_002897141.1 237812690 7888572 complement(2390692..2391681) 1 NC_012695.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2391681 panE_3 7888572 panE_3 Burkholderia pseudomallei MSHR346 2-dehydropantoate 2-reductase YP_002897141.1 2390692 R 536230 CDS YP_002897142.1 237812691 7890876 complement(2391765..2392910) 1 NC_012695.1 identified by match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; transcriptional regulator, LuxR family 2392910 7890876 GBP346_A2443 Burkholderia pseudomallei MSHR346 transcriptional regulator, LuxR family YP_002897142.1 2391765 R 536230 CDS YP_002897143.1 237812692 7888643 2393244..2394311 1 NC_012695.1 identified by match to protein family HMM PF00267; gram-negative porin 2394311 7888643 GBP346_A2444 Burkholderia pseudomallei MSHR346 gram-negative porin YP_002897143.1 2393244 D 536230 CDS YP_002897144.1 237812693 7888110 2394335..2395528 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 2395528 7888110 GBP346_A2445 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002897144.1 2394335 D 536230 CDS YP_002897145.1 237812694 7887746 2395585..2396694 1 NC_012695.1 identified by match to protein family HMM PF00850; histone deacetylase family protein 2396694 7887746 GBP346_A2446 Burkholderia pseudomallei MSHR346 histone deacetylase family protein YP_002897145.1 2395585 D 536230 CDS YP_002897146.1 237812695 7887443 2396889..2397512 1 NC_012695.1 phospholipase D (PLD) family protein 2397512 7887443 GBP346_A2447 Burkholderia pseudomallei MSHR346 phospholipase D (PLD) family protein YP_002897146.1 2396889 D 536230 CDS YP_002897147.1 237812696 7890491 complement(2397639..2397821) 1 NC_012695.1 hypothetical protein 2397821 7890491 GBP346_A2448 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897147.1 2397639 R 536230 CDS YP_002897148.1 237812697 7889875 2399027..2399221 1 NC_012695.1 putative exported avidin family protein 2399221 7889875 GBP346_A2449 Burkholderia pseudomallei MSHR346 putative exported avidin family protein YP_002897148.1 2399027 D 536230 CDS YP_002897149.1 237812698 7888511 2399282..2399530 1 NC_012695.1 hypothetical protein 2399530 7888511 GBP346_A2450 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897149.1 2399282 D 536230 CDS YP_002897150.1 237812699 7888638 complement(2399566..2399694) 1 NC_012695.1 DNA adenine methylase 2399694 7888638 GBP346_A2451 Burkholderia pseudomallei MSHR346 DNA adenine methylase YP_002897150.1 2399566 R 536230 CDS YP_002897151.1 237812700 7889744 2400723..2401145 1 NC_012695.1 identified by match to protein family HMM PF05488; PAAR motif protein 2401145 7889744 GBP346_A2452 Burkholderia pseudomallei MSHR346 PAAR motif protein YP_002897151.1 2400723 D 536230 CDS YP_002897152.1 237812701 7887593 2401142..2401648 1 NC_012695.1 hypothetical protein 2401648 7887593 GBP346_A2453 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897152.1 2401142 D 536230 CDS YP_002897153.1 237812702 7888430 2401665..2402114 1 NC_012695.1 hypothetical protein 2402114 7888430 GBP346_A2454 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897153.1 2401665 D 536230 CDS YP_002897154.1 237812703 7890911 2402446..2402592 1 NC_012695.1 hypothetical protein 2402592 7890911 GBP346_A2455 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897154.1 2402446 D 536230 CDS YP_002897155.1 237812704 7888564 2402599..2403324 1 NC_012695.1 hypothetical protein 2403324 7888564 GBP346_A2456 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897155.1 2402599 D 536230 CDS YP_002897156.1 237812705 7888129 complement(2403345..2403467) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2403467 7888129 GBP346_A2457 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897156.1 2403345 R 536230 CDS YP_002897157.1 237812706 7887135 complement(2403514..2403825) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; gp27 2403825 7887135 GBP346_A2458 Burkholderia pseudomallei MSHR346 gp27 YP_002897157.1 2403514 R 536230 CDS YP_002897158.1 237812707 7889179 2404344..2405186 1 NC_012695.1 identified by match to protein family HMM PF00494; match to protein family HMM TIGR03465; squalene synthase HpnD 2405186 hpnD_1 7889179 hpnD_1 Burkholderia pseudomallei MSHR346 squalene synthase HpnD YP_002897158.1 2404344 D 536230 CDS YP_002897159.1 237812708 7890013 complement(2405227..2406501) 1 NC_012695.1 identified by match to protein family HMM PF07394; match to protein family HMM TIGR01409; twin-arginine translocation pathway signal sequence domain protein 2406501 7890013 GBP346_A2461 Burkholderia pseudomallei MSHR346 twin-arginine translocation pathway signal sequence domain protein YP_002897159.1 2405227 R 536230 CDS YP_002897160.1 237812709 7886744 complement(2406563..2408026) 1 NC_012695.1 identified by match to protein family HMM PF08811; DNA-directed DNA polymerase B 2408026 7886744 GBP346_A2462 Burkholderia pseudomallei MSHR346 DNA-directed DNA polymerase B YP_002897160.1 2406563 R 536230 CDS YP_002897161.1 237812710 7888438 complement(2408222..2408512) 1 NC_012695.1 hypothetical protein 2408512 7888438 GBP346_A2463 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897161.1 2408222 R 536230 CDS YP_002897162.1 237812711 7889351 complement(2408512..2408694) 1 NC_012695.1 hypothetical protein 2408694 7889351 GBP346_A2464 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897162.1 2408512 R 536230 CDS YP_002897163.1 237812712 7889123 2408773..2409507 1 NC_012695.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2409507 ompR 7889123 ompR Burkholderia pseudomallei MSHR346 osmolarity response regulator YP_002897163.1 2408773 D 536230 CDS YP_002897164.1 237812713 7889930 2409595..2410932 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; RisS protein 2410932 7889930 GBP346_A2466 Burkholderia pseudomallei MSHR346 RisS protein YP_002897164.1 2409595 D 536230 CDS YP_002897165.1 237812714 7888351 2411131..2411679 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/Tsa family 2411679 7888351 GBP346_A2467 Burkholderia pseudomallei MSHR346 antioxidant, AhpC/Tsa family YP_002897165.1 2411131 D 536230 CDS YP_002897166.1 237812715 7889277 2411757..2412284 1 NC_012695.1 identified by match to protein family HMM PF02627; alkyl hydroperoxide reductase D 2412284 7889277 GBP346_A2468 Burkholderia pseudomallei MSHR346 alkyl hydroperoxide reductase D YP_002897166.1 2411757 D 536230 CDS YP_002897167.1 237812716 7889804 complement(2412645..2413133) 1 NC_012695.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2413133 ispF 7889804 ispF Burkholderia pseudomallei MSHR346 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002897167.1 2412645 R 536230 CDS YP_002897168.1 237812717 7890530 complement(2413174..2413884) 1 NC_012695.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2413884 ispD 7890530 ispD Burkholderia pseudomallei MSHR346 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002897168.1 2413174 R 536230 CDS YP_002897169.1 237812718 7890578 2413905..2417474 1 NC_012695.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 2417474 mfd 7890578 mfd Burkholderia pseudomallei MSHR346 transcription-repair coupling factor YP_002897169.1 2413905 D 536230 CDS YP_002897170.1 237812719 7889483 complement(2417973..2418269) 1 NC_012695.1 hypothetical protein 2418269 7889483 GBP346_A2472 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897170.1 2417973 R 536230 CDS YP_002897171.1 237812720 7889044 2418571..2419788 1 NC_012695.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2419788 argE 7889044 argE Burkholderia pseudomallei MSHR346 acetylornithine deacetylase YP_002897171.1 2418571 D 536230 CDS YP_002897172.1 237812721 7889818 2419850..2420881 1 NC_012695.1 identified by match to protein family HMM PF00291; phenylserine dehydratase 2420881 7889818 GBP346_A2474 Burkholderia pseudomallei MSHR346 phenylserine dehydratase YP_002897172.1 2419850 D 536230 CDS YP_002897173.1 237812722 7888536 complement(2421074..2421325) 1 NC_012695.1 hypothetical protein 2421325 7888536 GBP346_A2475 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897173.1 2421074 R 536230 CDS YP_002897174.1 237812723 7886891 2421341..2421796 1 NC_012695.1 hypothetical protein 2421796 7886891 GBP346_A2476 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897174.1 2421341 D 536230 CDS YP_002897175.1 237812724 7888778 complement(2421816..2422073) 1 NC_012695.1 lipid A biosynthesis acyltransferase 2422073 7888778 GBP346_A2477 Burkholderia pseudomallei MSHR346 lipid A biosynthesis acyltransferase YP_002897175.1 2421816 R 536230 CDS YP_002897176.1 237812725 7890738 complement(2422089..2422217) 1 NC_012695.1 hypothetical protein 2422217 7890738 GBP346_A2478 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897176.1 2422089 R 536230 CDS YP_002897177.1 237812726 7888508 complement(2422350..2424908) 1 NC_012695.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A 2424908 7888508 GBP346_A2479 Burkholderia pseudomallei MSHR346 penicillin-binding protein 1A YP_002897177.1 2422350 R 536230 CDS YP_002897178.1 237812727 7887452 2424933..2425118 1 NC_012695.1 hypothetical protein 2425118 7887452 GBP346_A2480 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897178.1 2424933 D 536230 CDS YP_002897179.1 237812728 7888328 2425179..2425298 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2425298 7888328 GBP346_A2481 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897179.1 2425179 D 536230 CDS YP_002897180.1 237812729 7890949 2425388..2426068 1 NC_012695.1 identified by match to protein family HMM PF04012; PspA/IM30 family protein 2426068 7890949 GBP346_A2482 Burkholderia pseudomallei MSHR346 PspA/IM30 family protein YP_002897180.1 2425388 D 536230 CDS YP_002897181.1 237812730 7887012 2426213..2427400 1 NC_012695.1 identified by match to protein family HMM PF07719; tetratricopeptide repeat protein 2427400 7887012 GBP346_A2483 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002897181.1 2426213 D 536230 CDS YP_002897182.1 237812731 7887947 2427584..2428015 1 NC_012695.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2428015 mscL 7887947 mscL Burkholderia pseudomallei MSHR346 large-conductance mechanosensitive channel YP_002897182.1 2427584 D 536230 CDS YP_002897183.1 237812732 7888412 2428093..2428218 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2428218 7888412 GBP346_A2485 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897183.1 2428093 D 536230 CDS YP_002897184.1 237812733 7889552 2428381..2428824 1 NC_012695.1 hypothetical protein 2428824 7889552 GBP346_A2486 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897184.1 2428381 D 536230 CDS YP_002897185.1 237812734 7889656 complement(2429005..2429943) 1 NC_012695.1 identified by match to protein family HMM PF03446; oxidoreductase 2429943 7889656 GBP346_A2487 Burkholderia pseudomallei MSHR346 oxidoreductase YP_002897185.1 2429005 R 536230 CDS YP_002897186.1 237812735 7888858 2430036..2430245 1 NC_012695.1 identified by match to protein family HMM PF07311; hypothetical protein 2430245 7888858 GBP346_A2488 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897186.1 2430036 D 536230 CDS YP_002897187.1 237812736 7890650 complement(2430359..2430529) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2430529 7890650 GBP346_A2489 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897187.1 2430359 R 536230 CDS YP_002897188.1 237812737 7886939 2430987..2431916 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2431916 7886939 GBP346_A2490 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002897188.1 2430987 D 536230 CDS YP_002897189.1 237812738 7888169 complement(2432258..2433760) 1 NC_012695.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 2433760 7888169 GBP346_A2491 Burkholderia pseudomallei MSHR346 hydroxydechloroatrazine ethylaminohydrolase YP_002897189.1 2432258 R 536230 CDS YP_002897190.1 237812739 7890009 complement(2433882..2434010) 1 NC_012695.1 hypothetical protein 2434010 7890009 GBP346_A2492 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897190.1 2433882 R 536230 CDS YP_002897191.1 237812740 7890107 2434057..2434170 1 NC_012695.1 hypothetical protein 2434170 7890107 GBP346_A2493 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897191.1 2434057 D 536230 CDS YP_002897192.1 237812741 7888633 2434254..2434607 1 NC_012695.1 identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962; hydroxyisourate hydrolase 2434607 uraH 7888633 uraH Burkholderia pseudomallei MSHR346 hydroxyisourate hydrolase YP_002897192.1 2434254 D 536230 CDS YP_002897193.1 237812742 7889984 2434657..2435859 1 NC_012695.1 identified by match to protein family HMM PF06181; hypothetical protein 2435859 7889984 GBP346_A2495 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897193.1 2434657 D 536230 CDS YP_002897194.1 237812743 7889292 2435917..2436084 1 NC_012695.1 hypothetical protein 2436084 7889292 GBP346_A2496 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897194.1 2435917 D 536230 CDS YP_002897195.1 237812744 7888166 complement(2436764..2437276) 1 NC_012695.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 2437276 allA_1 7888166 allA_1 Burkholderia pseudomallei MSHR346 ureidoglycolate hydrolase YP_002897195.1 2436764 R 536230 CDS YP_002897196.1 237812745 7887192 complement(2437273..2438427) 1 NC_012695.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 2438427 allC 7887192 allC Burkholderia pseudomallei MSHR346 allantoicase YP_002897196.1 2437273 R 536230 CDS YP_002897197.1 237812746 7888132 complement(2438515..2439039) 1 NC_012695.1 identified by match to protein family HMM PF09349; match to protein family HMM TIGR03164; ohcu decarboxylase 2439039 uraD 7888132 uraD Burkholderia pseudomallei MSHR346 ohcu decarboxylase YP_002897197.1 2438515 R 536230 CDS YP_002897198.1 237812747 7888029 complement(2439036..2439989) 1 NC_012695.1 identified by match to protein family HMM PF01522; match to protein family HMM TIGR03212; putative urate catabolism protein 2439989 7888029 GBP346_A2500 Burkholderia pseudomallei MSHR346 putative urate catabolism protein YP_002897198.1 2439036 R 536230 CDS YP_002897199.1 237812748 7888871 complement(2440135..2441091) 1 NC_012695.1 identified by match to protein family HMM PF01177; hydantoin racemase 2441091 7888871 GBP346_A2501 Burkholderia pseudomallei MSHR346 hydantoin racemase YP_002897199.1 2440135 R 536230 CDS YP_002897200.1 237812749 7887607 complement(2441102..2442592) 1 NC_012695.1 identified by match to protein family HMM PF02133; NCS1 nucleoside transporter family protein 2442592 7887607 GBP346_A2502 Burkholderia pseudomallei MSHR346 NCS1 nucleoside transporter family protein YP_002897200.1 2441102 R 536230 CDS YP_002897201.1 237812750 7890859 2442591..2442722 1 NC_012695.1 hypothetical protein 2442722 7890859 GBP346_A2503 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897201.1 2442591 D 536230 CDS YP_002897202.1 237812751 7888732 complement(2442747..2443442) 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 2443442 7888732 GBP346_A2504 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002897202.1 2442747 R 536230 CDS YP_002897203.1 237812752 7886969 complement(2443765..2444706) 1 NC_012695.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 2444706 ldcA 7886969 ldcA Burkholderia pseudomallei MSHR346 L,D-carboxypeptidase A YP_002897203.1 2443765 R 536230 CDS YP_002897204.1 237812753 7888466 complement(2444762..2445358) 1 NC_012695.1 identified by match to protein family HMM PF00383; tRNA-specific adenosine deaminase 2445358 7888466 GBP346_A2506 Burkholderia pseudomallei MSHR346 tRNA-specific adenosine deaminase YP_002897204.1 2444762 R 536230 CDS YP_002897205.1 237812754 7887962 complement(2445355..2445756) 1 NC_012695.1 identified by match to protein family HMM PF09350; hypothetical protein 2445756 7887962 GBP346_A2507 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897205.1 2445355 R 536230 CDS YP_002897206.1 237812755 7890442 complement(2446081..2446236) 1 NC_012695.1 hypothetical protein 2446236 7890442 GBP346_A2508 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897206.1 2446081 R 536230 CDS YP_002897207.1 237812756 7889131 complement(2446238..2446486) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2446486 7889131 GBP346_A2509 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897207.1 2446238 R 536230 CDS YP_002897208.1 237812757 7887833 complement(2446558..2447064) 1 NC_012695.1 identified by match to protein family HMM PF09351; helix-turn-helix- domain containing protein AraC type 2447064 7887833 GBP346_A2510 Burkholderia pseudomallei MSHR346 helix-turn-helix- domain containing protein AraC type YP_002897208.1 2446558 R 536230 CDS YP_002897209.1 237812758 7889924 2447432..2448652 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 2448652 7889924 GBP346_A2511 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002897209.1 2447432 D 536230 CDS YP_002897210.1 237812759 7886795 2448661..2448840 1 NC_012695.1 hypothetical protein 2448840 7886795 GBP346_A2512 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897210.1 2448661 D 536230 CDS YP_002897211.1 237812760 7887335 complement(2449015..2449170) 1 NC_012695.1 hypothetical protein 2449170 7887335 GBP346_A2513 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897211.1 2449015 R 536230 CDS YP_002897212.1 237812761 7889298 complement(2449602..2449778) 1 NC_012695.1 hypothetical protein 2449778 7889298 GBP346_A2514 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897212.1 2449602 R 536230 CDS YP_002897213.1 237812762 7887717 complement(2450324..2451559) 1 NC_012695.1 hypothetical protein 2451559 7887717 GBP346_A2515 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897213.1 2450324 R 536230 CDS YP_002897214.1 237812763 7890808 complement(2451562..2454372) 1 NC_012695.1 identified by match to protein family HMM PF02463; SMC domain protein 2454372 7890808 GBP346_A2516 Burkholderia pseudomallei MSHR346 SMC domain protein YP_002897214.1 2451562 R 536230 CDS YP_002897215.1 237812764 7888258 complement(2454372..2455055) 1 NC_012695.1 hypothetical protein 2455055 7888258 GBP346_A2517 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897215.1 2454372 R 536230 CDS YP_002897216.1 237812765 7889505 complement(2455039..2456373) 1 NC_012695.1 hypothetical protein 2456373 7889505 GBP346_A2519 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897216.1 2455039 R 536230 CDS YP_002897217.1 237812766 7890522 complement(2456485..2456646) 1 NC_012695.1 hypothetical protein 2456646 7890522 GBP346_A2520 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897217.1 2456485 R 536230 CDS YP_002897218.1 237812767 7887324 2457427..2457540 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2457540 7887324 GBP346_A2521 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897218.1 2457427 D 536230 CDS YP_002897219.1 237812768 7889245 2457491..2457931 1 NC_012695.1 adenosylhomocysteinase 2457931 7889245 GBP346_A2522 Burkholderia pseudomallei MSHR346 adenosylhomocysteinase YP_002897219.1 2457491 D 536230 CDS YP_002897220.1 237812769 7886848 2457909..2458835 1 NC_012695.1 identified by match to protein family HMM PF08843; hypothetical protein 2458835 7886848 GBP346_A2523 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897220.1 2457909 D 536230 CDS YP_002897221.1 237812770 7886845 2458851..2459030 1 NC_012695.1 hypothetical protein 2459030 7886845 GBP346_A2524 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897221.1 2458851 D 536230 CDS YP_002897222.1 237812771 7887262 complement(2459742..2461361) 1 NC_012695.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2461361 guaA 7887262 guaA Burkholderia pseudomallei MSHR346 GMP synthase YP_002897222.1 2459742 R 536230 CDS YP_002897223.1 237812772 7889541 complement(2461343..2461492) 1 NC_012695.1 hypothetical protein 2461492 7889541 GBP346_A2526 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897223.1 2461343 R 536230 CDS YP_002897224.1 237812773 7887057 complement(2461489..2462142) 1 NC_012695.1 hypothetical protein 2462142 7887057 GBP346_A2527 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897224.1 2461489 R 536230 CDS YP_002897225.1 237812774 7889327 complement(2462149..2463609) 1 NC_012695.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2463609 guaB 7889327 guaB Burkholderia pseudomallei MSHR346 inosine 5'-monophosphate dehydrogenase YP_002897225.1 2462149 R 536230 CDS YP_002897226.1 237812775 7889377 complement(2463661..2464011) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2464011 7889377 GBP346_A2529 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897226.1 2463661 R 536230 CDS YP_002897227.1 237812776 7887163 complement(2464026..2464790) 1 NC_012695.1 identified by match to protein family HMM PF05988; hypothetical protein 2464790 7887163 GBP346_A2530 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897227.1 2464026 R 536230 CDS YP_002897228.1 237812777 7888098 2464927..2466147 1 NC_012695.1 TPR repeat protein 2466147 7888098 GBP346_A2531 Burkholderia pseudomallei MSHR346 TPR repeat protein YP_002897228.1 2464927 D 536230 CDS YP_002897229.1 237812778 7888028 2466179..2466862 1 NC_012695.1 hypothetical protein 2466862 7888028 GBP346_A2532 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897229.1 2466179 D 536230 CDS YP_002897230.1 237812779 7889028 2467197..2468165 1 NC_012695.1 integral membrane protein 2468165 7889028 GBP346_A2533 Burkholderia pseudomallei MSHR346 integral membrane protein YP_002897230.1 2467197 D 536230 CDS YP_002897231.1 237812780 7886916 complement(2468324..2468647) 1 NC_012695.1 identified by match to protein family HMM PF03658; protein RnfH 2468647 7886916 GBP346_A2534 Burkholderia pseudomallei MSHR346 protein RnfH YP_002897231.1 2468324 R 536230 CDS YP_002897232.1 237812781 7890186 complement(2468653..2469123) 1 NC_012695.1 identified by match to protein family HMM PF03364; cyclase/dehydrase superfamily 2469123 7890186 GBP346_A2535 Burkholderia pseudomallei MSHR346 cyclase/dehydrase superfamily YP_002897232.1 2468653 R 536230 CDS YP_002897233.1 237812782 7888845 2469055..2469207 1 NC_012695.1 hypothetical protein 2469207 7888845 GBP346_A2536 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897233.1 2469055 D 536230 CDS YP_002897234.1 237812783 7888522 2469188..2469634 1 NC_012695.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2469634 smpB 7888522 smpB Burkholderia pseudomallei MSHR346 SsrA-binding protein YP_002897234.1 2469188 D 536230 CDS YP_002897235.1 237812784 7887922 complement(2469812..2470759) 1 NC_012695.1 identified by match to protein family HMM PF01145; spfh domain/band 7 family protein 2470759 7887922 GBP346_A2538 Burkholderia pseudomallei MSHR346 spfh domain/band 7 family protein YP_002897235.1 2469812 R 536230 CDS YP_002897236.1 237812785 7888301 complement(2470839..2471273) 1 NC_012695.1 identified by match to protein family HMM PF01957; NfeD family protein 2471273 7888301 GBP346_A2539 Burkholderia pseudomallei MSHR346 NfeD family protein YP_002897236.1 2470839 R 536230 CDS YP_002897237.1 237812786 7889272 complement(2471401..2473800) 1 NC_012695.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2473800 ppsA 7889272 ppsA Burkholderia pseudomallei MSHR346 phosphoenolpyruvate synthase YP_002897237.1 2471401 R 536230 CDS YP_002897238.1 237812787 7889809 2473815..2474369 1 NC_012695.1 hypothetical protein 2474369 7889809 GBP346_A2541 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897238.1 2473815 D 536230 CDS YP_002897239.1 237812788 7890533 complement(2474545..2475594) 1 NC_012695.1 identified by match to protein family HMM PF05023; putative phytochelatin synthase 2475594 7890533 GBP346_A2542 Burkholderia pseudomallei MSHR346 putative phytochelatin synthase YP_002897239.1 2474545 R 536230 CDS YP_002897240.1 237812789 7890569 complement(2475627..2477513) 1 NC_012695.1 identified by match to protein family HMM PF00082; match to protein family HMM PF09286; serine protease, subtilase family 2477513 7890569 GBP346_A2543 Burkholderia pseudomallei MSHR346 serine protease, subtilase family YP_002897240.1 2475627 R 536230 CDS YP_002897241.1 237812790 7889477 complement(2477917..2478039) 1 NC_012695.1 hypothetical protein 2478039 7889477 GBP346_A2544 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897241.1 2477917 R 536230 CDS YP_002897242.1 237812791 7889038 2478063..2478878 1 NC_012695.1 identified by match to protein family HMM PF03618; hypothetical protein 2478878 7889038 GBP346_A2545 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897242.1 2478063 D 536230 CDS YP_002897243.1 237812792 7889820 complement(2479080..2479868) 1 NC_012695.1 identified by match to protein family HMM PF00588; RNA methyltransferase, TrmH family 2479868 7889820 GBP346_A2546 Burkholderia pseudomallei MSHR346 RNA methyltransferase, TrmH family YP_002897243.1 2479080 R 536230 CDS YP_002897244.1 237812793 7890818 complement(2479865..2480509) 1 NC_012695.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2480509 rnhB 7890818 rnhB Burkholderia pseudomallei MSHR346 ribonuclease HII YP_002897244.1 2479865 R 536230 CDS YP_002897245.1 237812794 7890250 complement(2480509..2481675) 1 NC_012695.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2481675 lpxB 7890250 lpxB Burkholderia pseudomallei MSHR346 lipid-A-disaccharide synthase YP_002897245.1 2480509 R 536230 CDS YP_002897246.1 237812795 7890129 complement(2481679..2482467) 1 NC_012695.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2482467 lpxA 7890129 lpxA Burkholderia pseudomallei MSHR346 UDP-N-acetylglucosamine acyltransferase YP_002897246.1 2481679 R 536230 CDS YP_002897247.1 237812796 7887068 complement(2482523..2482990) 1 NC_012695.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2482990 fabZ 7887068 fabZ Burkholderia pseudomallei MSHR346 (3R)-hydroxymyristoyl-ACP dehydratase YP_002897247.1 2482523 R 536230 CDS YP_002897248.1 237812797 7886719 complement(2483136..2484221) 1 NC_012695.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2484221 lpxD 7886719 lpxD Burkholderia pseudomallei MSHR346 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002897248.1 2483136 R 536230 CDS YP_002897249.1 237812798 7889391 complement(2484238..2484744) 1 NC_012695.1 identified by match to protein family HMM PF03938; outer membrane protein 2484744 7889391 GBP346_A2552 Burkholderia pseudomallei MSHR346 outer membrane protein YP_002897249.1 2484238 R 536230 CDS YP_002897250.1 237812799 7888808 complement(2484809..2487118) 1 NC_012695.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303; outer membrane protein assembly complex, YaeT protein 2487118 yaeT 7888808 yaeT Burkholderia pseudomallei MSHR346 outer membrane protein assembly complex, YaeT protein YP_002897250.1 2484809 R 536230 CDS YP_002897251.1 237812800 7887117 2487101..2487214 1 NC_012695.1 hypothetical protein 2487214 7887117 GBP346_A2555 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897251.1 2487101 D 536230 CDS YP_002897252.1 237812801 7887821 complement(2487183..2488574) 1 NC_012695.1 identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; RIP metalloprotease RseP 2488574 rseP 7887821 rseP Burkholderia pseudomallei MSHR346 RIP metalloprotease RseP YP_002897252.1 2487183 R 536230 CDS YP_002897253.1 237812802 7890311 complement(2488592..2489788) 1 NC_012695.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2489788 dxr 7890311 dxr Burkholderia pseudomallei MSHR346 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002897253.1 2488592 R 536230 CDS YP_002897254.1 237812803 7887807 complement(2489803..2490624) 1 NC_012695.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 2490624 cdsA 7887807 cdsA Burkholderia pseudomallei MSHR346 phosphatidate cytidylyltransferase YP_002897254.1 2489803 R 536230 CDS YP_002897255.1 237812804 7889773 complement(2490618..2491400) 1 NC_012695.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 2491400 uppS 7889773 uppS Burkholderia pseudomallei MSHR346 di-trans,poly-cis-decaprenylcistransferase YP_002897255.1 2490618 R 536230 CDS YP_002897256.1 237812805 7888252 complement(2491448..2492008) 1 NC_012695.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2492008 frr 7888252 frr Burkholderia pseudomallei MSHR346 ribosome recycling factor YP_002897256.1 2491448 R 536230 CDS YP_002897257.1 237812806 7889352 complement(2492099..2492959) 1 NC_012695.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2492959 pyrH 7889352 pyrH Burkholderia pseudomallei MSHR346 uridylate kinase YP_002897257.1 2492099 R 536230 CDS YP_002897258.1 237812807 7889897 complement(2492991..2493872) 1 NC_012695.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2493872 tsf 7889897 tsf Burkholderia pseudomallei MSHR346 elongation factor Ts YP_002897258.1 2492991 R 536230 CDS YP_002897259.1 237812808 7888331 complement(2494055..2494795) 1 NC_012695.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2494795 rpsB 7888331 rpsB Burkholderia pseudomallei MSHR346 30S ribosomal protein S2 YP_002897259.1 2494055 R 536230 CDS YP_002897260.1 237812809 7887329 2495082..2495234 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2495234 7887329 GBP346_A2563 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897260.1 2495082 D 536230 CDS YP_002897261.1 237812810 7889884 2495278..2496093 1 NC_012695.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2496093 map_1 7889884 map_1 Burkholderia pseudomallei MSHR346 methionine aminopeptidase YP_002897261.1 2495278 D 536230 CDS YP_002897262.1 237812811 7887285 2496259..2498835 1 NC_012695.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2498835 glnD 7887285 glnD Burkholderia pseudomallei MSHR346 PII uridylyl-transferase YP_002897262.1 2496259 D 536230 CDS YP_002897263.1 237812812 7887393 2498850..2500565 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 2500565 7887393 GBP346_A2566 Burkholderia pseudomallei MSHR346 RNA pseudouridine synthase family protein YP_002897263.1 2498850 D 536230 CDS YP_002897264.1 237812813 7890539 complement(2500760..2501293) 1 NC_012695.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2501293 def_2 7890539 def_2 Burkholderia pseudomallei MSHR346 peptide deformylase YP_002897264.1 2500760 R 536230 CDS YP_002897265.1 237812814 7887554 complement(2501290..2503365) 1 NC_012695.1 identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase, NAD-dependent 2503365 ligA 7887554 ligA Burkholderia pseudomallei MSHR346 DNA ligase, NAD-dependent YP_002897265.1 2501290 R 536230 CDS YP_002897266.1 237812815 7890456 2503453..2503815 1 NC_012695.1 hypothetical protein 2503815 7890456 GBP346_A2570 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897266.1 2503453 D 536230 CDS YP_002897267.1 237812816 7888281 complement(2503805..2505076) 1 NC_012695.1 ZipA FtsZ-binding region 2505076 7888281 GBP346_A2569 Burkholderia pseudomallei MSHR346 ZipA FtsZ-binding region YP_002897267.1 2503805 R 536230 CDS YP_002897268.1 237812817 7888579 complement(2505158..2508670) 1 NC_012695.1 identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC 2508670 smc 7888579 smc Burkholderia pseudomallei MSHR346 chromosome segregation protein SMC YP_002897268.1 2505158 R 536230 CDS YP_002897269.1 237812818 7886989 complement(2508819..2509940) 1 NC_012695.1 identified by match to protein family HMM PF00892; match to protein family HMM PF03151; integral membrane protein 2509940 7886989 GBP346_A2572 Burkholderia pseudomallei MSHR346 integral membrane protein YP_002897269.1 2508819 R 536230 CDS YP_002897270.1 237812819 7886796 2510031..2511263 1 NC_012695.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2511263 dapC 7886796 dapC Burkholderia pseudomallei MSHR346 succinyldiaminopimelate transaminase YP_002897270.1 2510031 D 536230 CDS YP_002897271.1 237812820 7890690 2511320..2512147 1 NC_012695.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2512147 dapD 7890690 dapD Burkholderia pseudomallei MSHR346 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002897271.1 2511320 D 536230 CDS YP_002897272.1 237812821 7890764 2512147..2512521 1 NC_012695.1 identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; ArsC family protein 2512521 7890764 GBP346_A2575 Burkholderia pseudomallei MSHR346 ArsC family protein YP_002897272.1 2512147 D 536230 CDS YP_002897273.1 237812822 7888002 2512595..2513734 1 NC_012695.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2513734 dapE 7888002 dapE Burkholderia pseudomallei MSHR346 succinyl-diaminopimelate desuccinylase YP_002897273.1 2512595 D 536230 CDS YP_002897274.1 237812823 7889280 2513748..2514671 1 NC_012695.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2514671 prmB 7889280 prmB Burkholderia pseudomallei MSHR346 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_002897274.1 2513748 D 536230 CDS YP_002897275.1 237812824 7890631 2514959..2516398 1 NC_012695.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2516398 cls 7890631 cls Burkholderia pseudomallei MSHR346 cardiolipin synthetase YP_002897275.1 2514959 D 536230 CDS YP_002897276.1 237812825 7890179 complement(2516511..2516990) 1 NC_012695.1 identified by match to protein family HMM PF00255; peroxiredoxin Hyr1 2516990 7890179 GBP346_A2579 Burkholderia pseudomallei MSHR346 peroxiredoxin Hyr1 YP_002897276.1 2516511 R 536230 CDS YP_002897277.1 237812826 7890758 2517136..2519076 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 2519076 7890758 GBP346_A2580 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002897277.1 2517136 D 536230 CDS YP_002897278.1 237812827 7889285 complement(2519164..2519430) 1 NC_012695.1 hypothetical protein 2519430 7889285 GBP346_A2581 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897278.1 2519164 R 536230 CDS YP_002897279.1 237812828 7887405 complement(2519594..2520970) 1 NC_012695.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2520970 radA 7887405 radA Burkholderia pseudomallei MSHR346 DNA repair protein RadA YP_002897279.1 2519594 R 536230 CDS YP_002897280.1 237812829 7890535 complement(2520981..2522051) 1 NC_012695.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 2522051 alr 7890535 alr Burkholderia pseudomallei MSHR346 alanine racemase YP_002897280.1 2520981 R 536230 CDS YP_002897281.1 237812830 7888821 2522215..2523570 1 NC_012695.1 identified by match to protein family HMM PF07690; lysophospholipid transporter LplT 2523570 7888821 GBP346_A2584 Burkholderia pseudomallei MSHR346 lysophospholipid transporter LplT YP_002897281.1 2522215 D 536230 CDS YP_002897282.1 237812831 7890864 2523681..2524490 1 NC_012695.1 identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 2524490 thiD_1 7890864 thiD_1 Burkholderia pseudomallei MSHR346 phosphomethylpyrimidine kinase YP_002897282.1 2523681 D 536230 CDS YP_002897283.1 237812832 7890330 2524548..2524865 1 NC_012695.1 hypothetical protein 2524865 7890330 GBP346_A2586 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897283.1 2524548 D 536230 CDS YP_002897284.1 237812833 7887235 complement(2524898..2525878) 1 NC_012695.1 identified by match to protein family HMM PF08907; hypothetical protein 2525878 7887235 GBP346_A2587 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897284.1 2524898 R 536230 CDS YP_002897285.1 237812834 7888779 complement(2525875..2527281) 1 NC_012695.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase, family 4 2527281 7888779 GBP346_A2588 Burkholderia pseudomallei MSHR346 uracil-DNA glycosylase, family 4 YP_002897285.1 2525875 R 536230 CDS YP_002897286.1 237812835 7887325 complement(2527268..2527765) 1 NC_012695.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 2527765 rimI 7887325 rimI Burkholderia pseudomallei MSHR346 ribosomal-protein-alanine acetyltransferase YP_002897286.1 2527268 R 536230 CDS YP_002897287.1 237812836 7887419 complement(2527762..2528511) 1 NC_012695.1 identified by match to protein family HMM PF00814; glycoprotease family protein 2528511 7887419 GBP346_A2590 Burkholderia pseudomallei MSHR346 glycoprotease family protein YP_002897287.1 2527762 R 536230 CDS YP_002897288.1 237812837 7888762 2528693..2528962 1 NC_012695.1 identified by match to protein family HMM PF00887; acyl-CoA-binding protein 2528962 7888762 GBP346_A2591 Burkholderia pseudomallei MSHR346 acyl-CoA-binding protein YP_002897288.1 2528693 D 536230 CDS YP_002897289.1 237812838 7887888 2529250..2529417 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2529417 7887888 GBP346_A2592 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897289.1 2529250 D 536230 CDS YP_002897290.1 237812839 7887588 2529419..2530960 1 NC_012695.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; dead/deah box helicase 2530960 7887588 GBP346_A2593 Burkholderia pseudomallei MSHR346 dead/deah box helicase YP_002897290.1 2529419 D 536230 CDS YP_002897291.1 237812840 7888459 2531092..2532660 1 NC_012695.1 identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346; isocitrate lyase 2532660 aceA 7888459 aceA Burkholderia pseudomallei MSHR346 isocitrate lyase YP_002897291.1 2531092 D 536230 CDS YP_002897292.1 237812841 7890387 complement(2532921..2533355) 1 NC_012695.1 identified by match to protein family HMM PF00582; universal stress family protein 2533355 7890387 GBP346_A2595 Burkholderia pseudomallei MSHR346 universal stress family protein YP_002897292.1 2532921 R 536230 CDS YP_002897293.1 237812842 7888735 2533342..2533458 1 NC_012695.1 hypothetical protein 2533458 7888735 GBP346_A2596 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897293.1 2533342 D 536230 CDS YP_002897294.1 237812843 7887653 complement(2533635..2534618) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2534618 7887653 GBP346_A2597 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002897294.1 2533635 R 536230 CDS YP_002897295.1 237812844 7886765 2534697..2535479 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase, type II 2535479 dehII 7886765 dehII Burkholderia pseudomallei MSHR346 haloacid dehalogenase, type II YP_002897295.1 2534697 D 536230 CDS YP_002897296.1 237812845 7887313 2535532..2537124 1 NC_012695.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2537124 aceB 7887313 aceB Burkholderia pseudomallei MSHR346 malate synthase YP_002897296.1 2535532 D 536230 CDS YP_002897297.1 237812846 7887191 complement(2537627..2538085) 1 NC_012695.1 identified by match to protein family HMM PF06094; AIG2 family protein 2538085 7887191 GBP346_A2600 Burkholderia pseudomallei MSHR346 AIG2 family protein YP_002897297.1 2537627 R 536230 CDS YP_002897298.1 237812847 7890297 complement(2538082..2538579) 1 NC_012695.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2538579 7890297 GBP346_A2601 Burkholderia pseudomallei MSHR346 ribonuclease activity regulator protein RraA YP_002897298.1 2538082 R 536230 CDS YP_002897299.1 237812848 7889322 2538709..2539572 1 NC_012695.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; transcriptional regulator, AraC family 2539572 7889322 GBP346_A2602 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002897299.1 2538709 D 536230 CDS YP_002897300.1 237812849 7889424 complement(2540208..2540675) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2540675 7889424 GBP346_A2603 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897300.1 2540208 R 536230 CDS YP_002897301.1 237812850 7889197 complement(2541760..2543274) 1 NC_012695.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2543274 gltX 7889197 gltX Burkholderia pseudomallei MSHR346 glutamyl-tRNA synthetase YP_002897301.1 2541760 R 536230 CDS YP_002897302.1 237812851 7890689 2543669..2544712 1 NC_012695.1 identified by match to protein family HMM PF01734; phospholipase, patatin family 2544712 7890689 GBP346_A2610 Burkholderia pseudomallei MSHR346 phospholipase, patatin family YP_002897302.1 2543669 D 536230 CDS YP_002897303.1 237812852 7889944 complement(2544720..2544851) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2544851 7889944 GBP346_A2611 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897303.1 2544720 R 536230 CDS YP_002897304.1 237812853 7890796 complement(2544878..2545582) 1 NC_012695.1 identified by match to protein family HMM PF00877; NlpC/P60 domain protein 2545582 7890796 GBP346_A2612 Burkholderia pseudomallei MSHR346 NlpC/P60 domain protein YP_002897304.1 2544878 R 536230 CDS YP_002897305.1 237812854 7890301 complement(2545718..2547367) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; oligopeptide/dipeptide transporter, C- region family 2547367 7890301 GBP346_A2613 Burkholderia pseudomallei MSHR346 oligopeptide/dipeptide transporter, C- region family YP_002897305.1 2545718 R 536230 CDS YP_002897306.1 237812855 7888377 complement(2547364..2548461) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 2548461 7888377 GBP346_A2614 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002897306.1 2547364 R 536230 CDS YP_002897307.1 237812856 7888953 complement(2548463..2549503) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 2549503 7888953 GBP346_A2615 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002897307.1 2548463 R 536230 CDS YP_002897308.1 237812857 7889970 complement(2549692..2551644) 1 NC_012695.1 identified by match to protein family HMM PF00496; ABC transporter, periplasmic substrate-binding protein 2551644 7889970 GBP346_A2616 Burkholderia pseudomallei MSHR346 ABC transporter, periplasmic substrate-binding protein YP_002897308.1 2549692 R 536230 CDS YP_002897309.1 237812858 7888609 2551765..2552556 1 NC_012695.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 2552556 7888609 GBP346_A2617 Burkholderia pseudomallei MSHR346 enoyl-(acyl carrier protein) reductase YP_002897309.1 2551765 D 536230 CDS YP_002897310.1 237812859 7890199 complement(2552808..2553161) 1 NC_012695.1 hypothetical protein 2553161 7890199 GBP346_A2618 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897310.1 2552808 R 536230 CDS YP_002897311.1 237812860 7887370 2553421..2553636 1 NC_012695.1 hypothetical protein 2553636 7887370 GBP346_A2619 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897311.1 2553421 D 536230 CDS YP_002897312.1 237812861 7888950 complement(2553854..2556187) 1 NC_012695.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase 2556187 7888950 GBP346_A2620 Burkholderia pseudomallei MSHR346 molybdopterin oxidoreductase YP_002897312.1 2553854 R 536230 CDS YP_002897313.1 237812862 7887522 2556313..2556552 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2556552 7887522 GBP346_A2621 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897313.1 2556313 D 536230 CDS YP_002897314.1 237812863 7887907 complement(2556680..2557453) 1 NC_012695.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin--NADP reductase 2557453 fpr_2 7887907 fpr_2 Burkholderia pseudomallei MSHR346 ferredoxin--NADP reductase YP_002897314.1 2556680 R 536230 CDS YP_002897315.1 237812864 7890802 complement(2557461..2557832) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; identified by match to protein family HMM PF06463; molybdenum cofactor biosynthesis protein A 2557832 7890802 GBP346_A2623 Burkholderia pseudomallei MSHR346 molybdenum cofactor biosynthesis protein A YP_002897315.1 2557461 R 536230 CDS YP_002897316.1 237812865 7889697 complement(2558553..2558891) 1 NC_012695.1 identified by match to protein family HMM PF00037; ferredoxin-1 2558891 7889697 GBP346_A2624 Burkholderia pseudomallei MSHR346 ferredoxin-1 YP_002897316.1 2558553 R 536230 CDS YP_002897317.1 237812866 7888644 2559114..2559935 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 2559935 7888644 GBP346_A2625 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002897317.1 2559114 D 536230 CDS YP_002897318.1 237812867 7890924 complement(2560009..2560827) 1 NC_012695.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I 2560827 map_2 7890924 map_2 Burkholderia pseudomallei MSHR346 methionine aminopeptidase, type I YP_002897318.1 2560009 R 536230 CDS YP_002897319.1 237812868 7890939 complement(2560827..2561051) 1 NC_012695.1 hypothetical protein 2561051 7890939 GBP346_A2627 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897319.1 2560827 R 536230 CDS YP_002897320.1 237812869 7888702 complement(2561131..2561268) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2561268 7888702 GBP346_A2628 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897320.1 2561131 R 536230 CDS YP_002897321.1 237812870 7886986 complement(2561277..2563991) 1 NC_012695.1 identified by match to protein family HMM PF00206; match to protein family HMM PF02222; match to protein family HMM PF02655; argininosuccinate lyase 2563991 7886986 GBP346_A2629 Burkholderia pseudomallei MSHR346 argininosuccinate lyase YP_002897321.1 2561277 R 536230 CDS YP_002897322.1 237812871 7888550 complement(2564071..2565135) 1 NC_012695.1 identified by match to protein family HMM PF00291; cysteine synthase/cystathionine beta-synthase family protein 2565135 7888550 GBP346_A2630 Burkholderia pseudomallei MSHR346 cysteine synthase/cystathionine beta-synthase family protein YP_002897322.1 2564071 R 536230 CDS YP_002897323.1 237812872 7890830 complement(2565140..2566339) 1 NC_012695.1 identified by match to protein family HMM PF00288; ghmp kinase domain protein 2566339 7890830 GBP346_A2631 Burkholderia pseudomallei MSHR346 ghmp kinase domain protein YP_002897323.1 2565140 R 536230 CDS YP_002897324.1 237812873 7889056 complement(2566362..2567267) 1 NC_012695.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2567267 7889056 GBP346_A2632 Burkholderia pseudomallei MSHR346 sulfate adenylyltransferase subunit 2 YP_002897324.1 2566362 R 536230 CDS YP_002897325.1 237812874 7889616 complement(2567483..2568301) 1 NC_012695.1 identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family 2568301 7889616 GBP346_A2633 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 2 family YP_002897325.1 2567483 R 536230 CDS YP_002897326.1 237812875 7888390 complement(2568392..2569486) 1 NC_012695.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2569486 7888390 GBP346_A2634 Burkholderia pseudomallei MSHR346 phosphoserine aminotransferase YP_002897326.1 2568392 R 536230 CDS YP_002897327.1 237812876 7889319 complement(2569527..2570654) 1 NC_012695.1 identified by match to protein family HMM PF01757; acyltransferase family protein 2570654 7889319 GBP346_A2635 Burkholderia pseudomallei MSHR346 acyltransferase family protein YP_002897327.1 2569527 R 536230 CDS YP_002897328.1 237812877 7886846 complement(2570706..2571848) 1 NC_012695.1 hypothetical protein 2571848 7886846 GBP346_A2636 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897328.1 2570706 R 536230 CDS YP_002897329.1 237812878 7889117 complement(2571845..2572756) 1 NC_012695.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C- subunit 2572756 7889117 GBP346_A2637 Burkholderia pseudomallei MSHR346 transketolase, C- subunit YP_002897329.1 2571845 R 536230 CDS YP_002897330.1 237812879 7886691 complement(2572753..2573577) 1 NC_012695.1 identified by match to protein family HMM PF00456; transketolase, N- subunit 2573577 7886691 GBP346_A2638 Burkholderia pseudomallei MSHR346 transketolase, N- subunit YP_002897330.1 2572753 R 536230 CDS YP_002897331.1 237812880 7887251 complement(2573597..2574685) 1 NC_012695.1 hypothetical protein 2574685 7887251 GBP346_A2639 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897331.1 2573597 R 536230 CDS YP_002897332.1 237812881 7888548 complement(2574679..2575458) 1 NC_012695.1 hypothetical protein 2575458 7888548 GBP346_A2640 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897332.1 2574679 R 536230 CDS YP_002897333.1 237812882 7889576 complement(2575478..2576326) 1 NC_012695.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase family protein 2576326 7889576 GBP346_A2641 Burkholderia pseudomallei MSHR346 methyltransferase family protein YP_002897333.1 2575478 R 536230 CDS YP_002897334.1 237812883 7889239 complement(2576396..2577274) 1 NC_012695.1 identified by match to protein family HMM PF02668; dioxygenase, TauD/TfdA 2577274 7889239 GBP346_A2642 Burkholderia pseudomallei MSHR346 dioxygenase, TauD/TfdA YP_002897334.1 2576396 R 536230 CDS YP_002897335.1 237812884 7886857 complement(2577279..2578076) 1 NC_012695.1 hypothetical protein 2578076 7886857 GBP346_A2643 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897335.1 2577279 R 536230 CDS YP_002897336.1 237812885 7888932 complement(2578073..2587012) 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; linear gramicidin synthetase subunit D 2587012 7888932 GBP346_A2644 Burkholderia pseudomallei MSHR346 linear gramicidin synthetase subunit D YP_002897336.1 2578073 R 536230 CDS YP_002897337.1 237812886 7887350 complement(2587096..2588496) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD dependent oxidoreductase 2588496 7887350 GBP346_A2645 Burkholderia pseudomallei MSHR346 FAD dependent oxidoreductase YP_002897337.1 2587096 R 536230 CDS YP_002897338.1 237812887 7888824 complement(2588621..2588749) 1 NC_012695.1 hypothetical protein 2588749 7888824 GBP346_A2646 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897338.1 2588621 R 536230 CDS YP_002897339.1 237812888 7889389 complement(2588746..2590047) 1 NC_012695.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690; major facilitator family transporter 2590047 7889389 GBP346_A2647 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002897339.1 2588746 R 536230 CDS YP_002897340.1 237812889 7889159 complement(2590115..2592016) 1 NC_012695.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; amino acid adenylation domain protein 2592016 7889159 GBP346_A2648 Burkholderia pseudomallei MSHR346 amino acid adenylation domain protein YP_002897340.1 2590115 R 536230 CDS YP_002897341.1 237812890 7890455 complement(2592004..2593515) 1 NC_012695.1 identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; sulfate adenylate transferase, subunit 1/adenylylsulfate kinase 2593515 7890455 GBP346_A2649 Burkholderia pseudomallei MSHR346 sulfate adenylate transferase, subunit 1/adenylylsulfate kinase YP_002897341.1 2592004 R 536230 CDS YP_002897342.1 237812891 7888373 2593562..2593675 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2593675 7888373 GBP346_A2650 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897342.1 2593562 D 536230 CDS YP_002897343.1 237812892 7888218 complement(2593700..2593816) 1 NC_012695.1 hypothetical protein 2593816 7888218 GBP346_A2651 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897343.1 2593700 R 536230 CDS YP_002897344.1 237812893 7887764 2594058..2594276 1 NC_012695.1 hypothetical protein 2594276 7887764 GBP346_A2652 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897344.1 2594058 D 536230 CDS YP_002897345.1 237812894 7888378 2594609..2594851 1 NC_012695.1 hypothetical protein 2594851 7888378 GBP346_A2653 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897345.1 2594609 D 536230 CDS YP_002897346.1 237812895 7890307 2594945..2596180 1 NC_012695.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01409; match to protein family HMM TIGR01730; efflux transporter, RND family, MFP subunit 2596180 7890307 GBP346_A2654 Burkholderia pseudomallei MSHR346 efflux transporter, RND family, MFP subunit YP_002897346.1 2594945 D 536230 CDS YP_002897347.1 237812896 7887089 2596177..2599323 1 NC_012695.1 identified by match to protein family HMM PF00873; multidrug resistance protein MdtB (Multidrug transporter mdtB) 2599323 7887089 GBP346_A2655 Burkholderia pseudomallei MSHR346 multidrug resistance protein MdtB (Multidrug transporter mdtB) YP_002897347.1 2596177 D 536230 CDS YP_002897348.1 237812897 7889222 2599401..2600621 1 NC_012695.1 hypothetical protein 2600621 7889222 GBP346_A2656 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897348.1 2599401 D 536230 CDS YP_002897349.1 237812898 7887442 complement(2600660..2602492) 1 NC_012695.1 identified by match to protein family HMM PF00657; match to protein family HMM PF03797; match to protein family HMM TIGR01414; autotransporter beta-domain protein 2602492 7887442 GBP346_A2657 Burkholderia pseudomallei MSHR346 autotransporter beta-domain protein YP_002897349.1 2600660 R 536230 CDS YP_002897350.1 237812899 7889589 complement(2602694..2603740) 1 NC_012695.1 hypothetical protein 2603740 7889589 GBP346_A2658 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897350.1 2602694 R 536230 CDS YP_002897351.1 237812900 7889843 complement(2604051..2604263) 1 NC_012695.1 hypothetical protein 2604263 7889843 GBP346_A2659 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897351.1 2604051 R 536230 CDS YP_002897352.1 237812901 7889191 complement(2604998..2606248) 1 NC_012695.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2606248 7889191 GBP346_A2661 Burkholderia pseudomallei MSHR346 aspartate kinase YP_002897352.1 2604998 R 536230 CDS YP_002897353.1 237812902 7887256 2606231..2606473 1 NC_012695.1 hypothetical protein 2606473 7887256 GBP346_A2662 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897353.1 2606231 D 536230 CDS YP_002897354.1 237812903 7887780 complement(2606589..2608058) 1 NC_012695.1 identified by match to protein family HMM PF01171; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthase 2608058 7887780 GBP346_A2663 Burkholderia pseudomallei MSHR346 tRNA(Ile)-lysidine synthase YP_002897354.1 2606589 R 536230 CDS YP_002897355.1 237812904 7888387 complement(2608102..2609073) 1 NC_012695.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2609073 accA 7888387 accA Burkholderia pseudomallei MSHR346 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002897355.1 2608102 R 536230 CDS YP_002897356.1 237812905 7888245 complement(2609177..2610115) 1 NC_012695.1 identified by match to protein family HMM PF00730; DNA-3-methyladenine glycosylase 2610115 7888245 GBP346_A2665 Burkholderia pseudomallei MSHR346 DNA-3-methyladenine glycosylase YP_002897356.1 2609177 R 536230 CDS YP_002897357.1 237812906 7890940 complement(2610163..2611560) 1 NC_012695.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2611560 cysS 7890940 cysS Burkholderia pseudomallei MSHR346 cysteinyl-tRNA synthetase YP_002897357.1 2610163 R 536230 CDS YP_002897358.1 237812907 7889260 2611792..2612514 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; tetratricopeptide repeat protein 2612514 7889260 GBP346_A2667 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002897358.1 2611792 D 536230 CDS YP_002897359.1 237812908 7887514 2612571..2613146 1 NC_012695.1 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase 2613146 7887514 GBP346_A2668 Burkholderia pseudomallei MSHR346 peptidyl-prolyl cis-trans isomerase YP_002897359.1 2612571 D 536230 CDS YP_002897360.1 237812909 7890245 2613227..2613718 1 NC_012695.1 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 2613718 7890245 GBP346_A2669 Burkholderia pseudomallei MSHR346 peptidyl-prolyl cis-trans isomerase B YP_002897360.1 2613227 D 536230 CDS YP_002897361.1 237812910 7890790 2613743..2614543 1 NC_012695.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2614543 lpxH 7890790 lpxH Burkholderia pseudomallei MSHR346 UDP-2,3-diacylglucosamine hydrolase YP_002897361.1 2613743 D 536230 CDS YP_002897362.1 237812911 7887953 2614540..2614845 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2614845 7887953 GBP346_A2671 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897362.1 2614540 D 536230 CDS YP_002897363.1 237812912 7888410 complement(2614892..2615677) 1 NC_012695.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; probable serine acetyltransferase (SAT) 2615677 7888410 GBP346_A2672 Burkholderia pseudomallei MSHR346 probable serine acetyltransferase (SAT) YP_002897363.1 2614892 R 536230 CDS YP_002897364.1 237812913 7887977 complement(2615868..2616884) 1 NC_012695.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050; RNA methyltransferase, TrmH family, group 1 2616884 7887977 GBP346_A2673 Burkholderia pseudomallei MSHR346 RNA methyltransferase, TrmH family, group 1 YP_002897364.1 2615868 R 536230 CDS YP_002897365.1 237812914 7890341 2617080..2617883 1 NC_012695.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 2617883 7890341 GBP346_A2674 Burkholderia pseudomallei MSHR346 inositol monophosphatase family protein YP_002897365.1 2617080 D 536230 CDS YP_002897366.1 237812915 7890283 complement(2618152..2618424) 1 NC_012695.1 hypothetical protein 2618424 7890283 GBP346_A2675 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897366.1 2618152 R 536230 CDS YP_002897367.1 237812916 7886816 2618641..2618808 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2618808 7886816 GBP346_A2676 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897367.1 2618641 D 536230 CDS YP_002897368.1 237812917 7887672 complement(2618960..2619091) 1 NC_012695.1 hypothetical protein 2619091 7887672 GBP346_A2677 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897368.1 2618960 R 536230 CDS YP_002897369.1 237812918 7889371 2619224..2619346 1 NC_012695.1 hypothetical protein 2619346 7889371 GBP346_A2679 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897369.1 2619224 D 536230 CDS YP_002897370.1 237812919 7890189 complement(2619332..2619559) 1 NC_012695.1 hypothetical protein 2619559 7890189 GBP346_A2678 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897370.1 2619332 R 536230 CDS YP_002897371.1 237812920 7890817 2619622..2619861 1 NC_012695.1 DNA mismatch repair protein 2619861 7890817 GBP346_A2680 Burkholderia pseudomallei MSHR346 DNA mismatch repair protein YP_002897371.1 2619622 D 536230 CDS YP_002897372.1 237812921 7888300 complement(2620036..2622252) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; HypX 2622252 7888300 GBP346_A2681 Burkholderia pseudomallei MSHR346 HypX YP_002897372.1 2620036 R 536230 CDS YP_002897373.1 237812922 7887434 complement(2622438..2623034) 1 NC_012695.1 hypothetical protein 2623034 7887434 GBP346_A2682 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897373.1 2622438 R 536230 CDS YP_002897374.1 237812923 7887058 2623132..2623299 1 NC_012695.1 hypothetical protein 2623299 7887058 GBP346_A2683 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897374.1 2623132 D 536230 CDS YP_002897375.1 237812924 7888757 2623469..2623690 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2623690 7888757 GBP346_A2684 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897375.1 2623469 D 536230 CDS YP_002897376.1 237812925 7889737 2624527..2624754 1 NC_012695.1 ATP synthase F0, B' subunit 2624754 7889737 GBP346_A2685 Burkholderia pseudomallei MSHR346 ATP synthase F0, B' subunit YP_002897376.1 2624527 D 536230 CDS YP_002897377.1 237812926 7889548 2625992..2626417 1 NC_012695.1 identified by match to protein family HMM PF05488; PAAR motif protein 2626417 7889548 GBP346_A2686 Burkholderia pseudomallei MSHR346 PAAR motif protein YP_002897377.1 2625992 D 536230 CDS YP_002897378.1 237812927 7888131 2626414..2626920 1 NC_012695.1 hypothetical protein 2626920 7888131 GBP346_A2687 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897378.1 2626414 D 536230 CDS YP_002897379.1 237812928 7888864 2626937..2627386 1 NC_012695.1 hypothetical protein 2627386 7888864 GBP346_A2688 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897379.1 2626937 D 536230 CDS YP_002897380.1 237812929 7887679 2627205..2627873 1 NC_012695.1 hypothetical protein 2627873 7887679 GBP346_A2689 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897380.1 2627205 D 536230 CDS YP_002897381.1 237812930 7886784 2627885..2628595 1 NC_012695.1 hypothetical protein 2628595 7886784 GBP346_A2690 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897381.1 2627885 D 536230 CDS YP_002897382.1 237812931 7890537 complement(2628636..2629424) 1 NC_012695.1 identified by match to protein family HMM PF02086; DNA adenine methylase 2629424 7890537 GBP346_A2691 Burkholderia pseudomallei MSHR346 DNA adenine methylase YP_002897382.1 2628636 R 536230 CDS YP_002897383.1 237812932 7890266 complement(2629568..2630113) 1 NC_012695.1 bacteriophage lysis protein 2630113 7890266 GBP346_A2692 Burkholderia pseudomallei MSHR346 bacteriophage lysis protein YP_002897383.1 2629568 R 536230 CDS YP_002897384.1 237812933 7890091 complement(2630113..2630610) 1 NC_012695.1 identified by match to protein family HMM PF00959; gp24 2630610 7890091 GBP346_A2693 Burkholderia pseudomallei MSHR346 gp24 YP_002897384.1 2630113 R 536230 CDS YP_002897385.1 237812934 7887729 complement(2630603..2630797) 1 NC_012695.1 hypothetical protein 2630797 7887729 GBP346_A2694 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897385.1 2630603 R 536230 CDS YP_002897386.1 237812935 7890832 2631025..2631474 1 NC_012695.1 hypothetical protein 2631474 7890832 GBP346_A2695 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897386.1 2631025 D 536230 CDS YP_002897387.1 237812936 7890411 complement(2631606..2632658) 1 NC_012695.1 identified by match to protein family HMM PF05954; pyocin R2_PP, tail formation 2632658 7890411 GBP346_A2696 Burkholderia pseudomallei MSHR346 pyocin R2_PP, tail formation YP_002897387.1 2631606 R 536230 CDS YP_002897388.1 237812937 7888908 complement(2632668..2632883) 1 NC_012695.1 identified by match to protein family HMM PF05489; phage Tail Protein X 2632883 7888908 GBP346_A2697 Burkholderia pseudomallei MSHR346 phage Tail Protein X YP_002897388.1 2632668 R 536230 CDS YP_002897389.1 237812938 7888010 complement(2632849..2633730) 1 NC_012695.1 identified by match to protein family HMM PF06995; phage P2 GpU family protein 2633730 7888010 GBP346_A2698 Burkholderia pseudomallei MSHR346 phage P2 GpU family protein YP_002897389.1 2632849 R 536230 CDS YP_002897390.1 237812939 7886954 complement(2633739..2636153) 1 NC_012695.1 identified by match to protein family HMM TIGR01760; tail tape meausure protein 2636153 7886954 GBP346_A2699 Burkholderia pseudomallei MSHR346 tail tape meausure protein YP_002897390.1 2633739 R 536230 CDS YP_002897391.1 237812940 7890391 complement(2636171..2636287) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2636287 7890391 GBP346_A2700 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897391.1 2636171 R 536230 CDS YP_002897392.1 237812941 7888544 complement(2636241..2636543) 1 NC_012695.1 hypothetical protein 2636543 7888544 GBP346_A2701 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897392.1 2636241 R 536230 CDS YP_002897393.1 237812942 7886748 complement(2636613..2637116) 1 NC_012695.1 identified by match to protein family HMM PF04985; match to protein family HMM TIGR01611; phage major tail tube protein 2637116 7886748 GBP346_A2702 Burkholderia pseudomallei MSHR346 phage major tail tube protein YP_002897393.1 2636613 R 536230 CDS YP_002897394.1 237812943 7886793 complement(2637127..2638296) 1 NC_012695.1 identified by match to protein family HMM PF04984; phage tail sheath protein 2638296 7886793 GBP346_A2703 Burkholderia pseudomallei MSHR346 phage tail sheath protein YP_002897394.1 2637127 R 536230 CDS YP_002897395.1 237812944 7890252 complement(2638362..2638814) 1 NC_012695.1 hypothetical protein 2638814 7890252 GBP346_A2704 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897395.1 2638362 R 536230 CDS YP_002897396.1 237812945 7888700 complement(2638830..2640293) 1 NC_012695.1 gp26 2640293 7888700 GBP346_A2705 Burkholderia pseudomallei MSHR346 gp26 YP_002897396.1 2638830 R 536230 CDS YP_002897397.1 237812946 7889450 complement(2640281..2640856) 1 NC_012695.1 identified by match to protein family HMM PF09684; match to protein family HMM TIGR01634; phage tail protein I 2640856 7889450 GBP346_A2706 Burkholderia pseudomallei MSHR346 phage tail protein I YP_002897397.1 2640281 R 536230 CDS YP_002897398.1 237812947 7890839 complement(2640849..2641742) 1 NC_012695.1 identified by match to protein family HMM PF04865; hypothetical protein 2641742 7890839 GBP346_A2707 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897398.1 2640849 R 536230 CDS YP_002897399.1 237812948 7887655 complement(2641739..2642083) 1 NC_012695.1 identified by match to protein family HMM PF04965; GPW/gp25 family protein 2642083 7887655 GBP346_A2708 Burkholderia pseudomallei MSHR346 GPW/gp25 family protein YP_002897399.1 2641739 R 536230 CDS YP_002897400.1 237812949 7888848 complement(2642080..2642286) 1 NC_012695.1 hypothetical protein 2642286 7888848 GBP346_A2709 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897400.1 2642080 R 536230 CDS YP_002897401.1 237812950 7888017 complement(2642351..2643031) 1 NC_012695.1 identified by match to protein family HMM PF04717; match to protein family HMM TIGR01644; phage baseplate assembly protein V 2643031 7888017 GBP346_A2710 Burkholderia pseudomallei MSHR346 phage baseplate assembly protein V YP_002897401.1 2642351 R 536230 CDS YP_002897402.1 237812951 7889252 complement(2643034..2643567) 1 NC_012695.1 hypothetical protein 2643567 7889252 GBP346_A2711 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897402.1 2643034 R 536230 CDS YP_002897403.1 237812952 7890573 complement(2643557..2644087) 1 NC_012695.1 hypothetical protein 2644087 7890573 GBP346_A2712 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897403.1 2643557 R 536230 CDS YP_002897404.1 237812953 7888525 complement(2644089..2644379) 1 NC_012695.1 hypothetical protein 2644379 7888525 GBP346_A2713 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897404.1 2644089 R 536230 CDS YP_002897405.1 237812954 7887468 complement(2644383..2645477) 1 NC_012695.1 hypothetical protein 2645477 7887468 GBP346_A2714 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897405.1 2644383 R 536230 CDS YP_002897406.1 237812955 7888768 complement(2645443..2645787) 1 NC_012695.1 hypothetical protein 2645787 7888768 GBP346_A2715 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897406.1 2645443 R 536230 CDS YP_002897407.1 237812956 7889662 complement(2645814..2646914) 1 NC_012695.1 identified by match to protein family HMM PF00574; peptidase S14, ClpP 2646914 7889662 GBP346_A2716 Burkholderia pseudomallei MSHR346 peptidase S14, ClpP YP_002897407.1 2645814 R 536230 CDS YP_002897408.1 237812957 7888254 complement(2646911..2648404) 1 NC_012695.1 identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539; phage portal protein, lambda family 2648404 7888254 GBP346_A2717 Burkholderia pseudomallei MSHR346 phage portal protein, lambda family YP_002897408.1 2646911 R 536230 CDS YP_002897409.1 237812958 7889780 complement(2648401..2648607) 1 NC_012695.1 hypothetical protein 2648607 7889780 GBP346_A2718 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897409.1 2648401 R 536230 CDS YP_002897410.1 237812959 7886877 complement(2648618..2650729) 1 NC_012695.1 identified by match to protein family HMM PF05876; phage terminase large subunit (GpA) 2650729 7886877 GBP346_A2719 Burkholderia pseudomallei MSHR346 phage terminase large subunit (GpA) YP_002897410.1 2648618 R 536230 CDS YP_002897411.1 237812960 7890698 complement(2650566..2650994) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 2650994 7890698 GBP346_A2720 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897411.1 2650566 R 536230 CDS YP_002897412.1 237812961 7887938 complement(2651231..2651419) 1 NC_012695.1 hypothetical protein 2651419 7887938 GBP346_A2721 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897412.1 2651231 R 536230 CDS YP_002897413.1 237812962 7887568 complement(2652224..2652811) 1 NC_012695.1 hypothetical protein 2652811 7887568 GBP346_A2722 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897413.1 2652224 R 536230 CDS YP_002897414.1 237812963 7888992 complement(2653029..2655521) 1 NC_012695.1 identified by match to protein family HMM PF05272; virulence-associated E family protein 2655521 7888992 GBP346_A2723 Burkholderia pseudomallei MSHR346 virulence-associated E family protein YP_002897414.1 2653029 R 536230 CDS YP_002897415.1 237812964 7890549 complement(2655641..2656111) 1 NC_012695.1 hypothetical protein 2656111 7890549 GBP346_A2724 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897415.1 2655641 R 536230 CDS YP_002897416.1 237812965 7888171 complement(2656242..2656415) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2656415 7888171 GBP346_A2725 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897416.1 2656242 R 536230 CDS YP_002897417.1 237812966 7886967 complement(2657016..2657360) 1 NC_012695.1 hypothetical protein 2657360 7886967 GBP346_A2726 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897417.1 2657016 R 536230 CDS YP_002897418.1 237812967 7889919 complement(2657362..2657853) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 2657853 7889919 GBP346_A2727 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897418.1 2657362 R 536230 CDS YP_002897419.1 237812968 7888463 2659184..2659303 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2659303 7888463 GBP346_A2728 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897419.1 2659184 D 536230 CDS YP_002897420.1 237812969 7889535 2659355..2659690 1 NC_012695.1 hypothetical protein 2659690 7889535 GBP346_A2729 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897420.1 2659355 D 536230 CDS YP_002897421.1 237812970 7887894 2659687..2660292 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2660292 7887894 GBP346_A2730 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897421.1 2659687 D 536230 CDS YP_002897422.1 237812971 7888496 2660289..2660738 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2660738 7888496 GBP346_A2731 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897422.1 2660289 D 536230 CDS YP_002897423.1 237812972 7888031 2660738..2662054 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 2662054 7888031 GBP346_A2732 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897423.1 2660738 D 536230 CDS YP_002897424.1 237812973 7887530 complement(2662159..2662335) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2662335 7887530 GBP346_A2733 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897424.1 2662159 R 536230 CDS YP_002897425.1 237812974 7886931 2662318..2662497 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2662497 7886931 GBP346_A2734 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897425.1 2662318 D 536230 CDS YP_002897426.1 237812975 7887098 2662506..2662979 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2662979 7887098 GBP346_A2735 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897426.1 2662506 D 536230 CDS YP_002897427.1 237812976 7889856 complement(2663181..2664482) 1 NC_012695.1 identified by match to protein family HMM PF00589; integrase family protein 2664482 7889856 GBP346_A2736 Burkholderia pseudomallei MSHR346 integrase family protein YP_002897427.1 2663181 R 536230 CDS YP_002897428.1 237812977 7889325 2664642..2667326 1 NC_012695.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2667326 mutS 7889325 mutS Burkholderia pseudomallei MSHR346 DNA mismatch repair protein MutS YP_002897428.1 2664642 D 536230 CDS YP_002897429.1 237812978 7889053 2667313..2668611 1 NC_012695.1 hypothetical protein 2668611 7889053 GBP346_A2739 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897429.1 2667313 D 536230 CDS YP_002897430.1 237812979 7888906 complement(2668591..2669136) 1 NC_012695.1 fkbp-type peptidyl-prolyl cis-trans isomerase 2669136 7888906 GBP346_A2738 Burkholderia pseudomallei MSHR346 fkbp-type peptidyl-prolyl cis-trans isomerase YP_002897430.1 2668591 R 536230 CDS YP_002897431.1 237812980 7888345 2669205..2670392 1 NC_012695.1 identified by match to protein family HMM PF08007; cupin domain protein 2670392 7888345 GBP346_A2740 Burkholderia pseudomallei MSHR346 cupin domain protein YP_002897431.1 2669205 D 536230 CDS YP_002897432.1 237812981 7888935 complement(2671119..2671895) 1 NC_012695.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2671895 7888935 GBP346_A2741 Burkholderia pseudomallei MSHR346 metallo-beta-lactamase family protein YP_002897432.1 2671119 R 536230 CDS YP_002897433.1 237812982 7889657 complement(2671900..2673042) 1 NC_012695.1 putative lipoprotein 2673042 7889657 GBP346_A2742 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897433.1 2671900 R 536230 CDS YP_002897434.1 237812983 7887996 complement(2673153..2674055) 1 NC_012695.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2674055 dapA_2 7887996 dapA_2 Burkholderia pseudomallei MSHR346 dihydrodipicolinate synthase YP_002897434.1 2673153 R 536230 CDS YP_002897435.1 237812984 7886768 complement(2674100..2674717) 1 NC_012695.1 hypothetical protein 2674717 7886768 GBP346_A2744 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897435.1 2674100 R 536230 CDS YP_002897436.1 237812985 7890714 complement(2674714..2675916) 1 NC_012695.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2675916 trpS_1 7890714 trpS_1 Burkholderia pseudomallei MSHR346 tryptophanyl-tRNA synthetase YP_002897436.1 2674714 R 536230 CDS YP_002897437.1 237812986 7888777 complement(2675925..2676590) 1 NC_012695.1 identified by match to protein family HMM PF02163; putative membrane-associated zinc metalloprotease 2676590 7888777 GBP346_A2746 Burkholderia pseudomallei MSHR346 putative membrane-associated zinc metalloprotease YP_002897437.1 2675925 R 536230 CDS YP_002897438.1 237812987 7887006 complement(2676689..2677318) 1 NC_012695.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 2677318 7887006 GBP346_A2747 Burkholderia pseudomallei MSHR346 Sua5/YciO/YrdC/YwlC family protein YP_002897438.1 2676689 R 536230 CDS YP_002897439.1 237812988 7888244 complement(2677383..2678213) 1 NC_012695.1 identified by match to protein family HMM PF02811; PHP C- domain protein 2678213 7888244 GBP346_A2748 Burkholderia pseudomallei MSHR346 PHP C- domain protein YP_002897439.1 2677383 R 536230 CDS YP_002897440.1 237812989 7886710 complement(2678229..2678468) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2678468 7886710 GBP346_A2749 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897440.1 2678229 R 536230 CDS YP_002897441.1 237812990 7889911 complement(2678476..2679366) 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 2679366 7889911 GBP346_A2750 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002897441.1 2678476 R 536230 CDS YP_002897442.1 237812991 7887457 complement(2679521..2680339) 1 NC_012695.1 identified by match to protein family HMM PF04305; hypothetical protein 2680339 7887457 GBP346_A2751 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897442.1 2679521 R 536230 CDS YP_002897443.1 237812992 7890121 2680549..2681073 1 NC_012695.1 identified by match to protein family HMM PF00132; transferase hexapeptide domain protein 2681073 7890121 GBP346_A2752 Burkholderia pseudomallei MSHR346 transferase hexapeptide domain protein YP_002897443.1 2680549 D 536230 CDS YP_002897444.1 237812993 7890500 2681112..2682062 1 NC_012695.1 identified by match to protein family HMM PF01430; chaperonin HslO 2682062 hslO 7890500 hslO Burkholderia pseudomallei MSHR346 chaperonin HslO YP_002897444.1 2681112 D 536230 CDS YP_002897445.1 237812994 7889469 2682146..2682493 1 NC_012695.1 putative lipoprotein 2682493 7889469 GBP346_A2754 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897445.1 2682146 D 536230 CDS YP_002897446.1 237812995 7889565 complement(2682703..2683134) 1 NC_012695.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 2683134 ftsB 7889565 ftsB Burkholderia pseudomallei MSHR346 cell division protein FtsB YP_002897446.1 2682703 R 536230 CDS YP_002897447.1 237812996 7887418 complement(2683226..2684509) 1 NC_012695.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2684509 eno 7887418 eno Burkholderia pseudomallei MSHR346 phosphopyruvate hydratase YP_002897447.1 2683226 R 536230 CDS YP_002897448.1 237812997 7888473 complement(2684613..2685467) 1 NC_012695.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2685467 kdsA_1 7888473 kdsA_1 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxyphosphooctonate aldolase YP_002897448.1 2684613 R 536230 CDS YP_002897449.1 237812998 7889663 complement(2685464..2687125) 1 NC_012695.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2687125 pyrG 7889663 pyrG Burkholderia pseudomallei MSHR346 CTP synthetase YP_002897449.1 2685464 R 536230 CDS YP_002897450.1 237812999 7888804 2687132..2687431 1 NC_012695.1 hypothetical protein 2687431 7888804 GBP346_A2760 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897450.1 2687132 D 536230 CDS YP_002897451.1 237813000 7887657 complement(2687382..2688209) 1 NC_012695.1 hypothetical protein 2688209 7887657 GBP346_A2759 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897451.1 2687382 R 536230 CDS YP_002897452.1 237813001 7889569 complement(2688246..2690816) 1 NC_012695.1 identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 2690816 7889569 GBP346_A2761 Burkholderia pseudomallei MSHR346 DNA internalization-related competence protein ComEC/Rec2 YP_002897452.1 2688246 R 536230 CDS YP_002897453.1 237813002 7887178 complement(2690827..2691615) 1 NC_012695.1 identified by match to protein family HMM PF01026; hydrolase, TatD family 2691615 7887178 GBP346_A2762 Burkholderia pseudomallei MSHR346 hydrolase, TatD family YP_002897453.1 2690827 R 536230 CDS YP_002897454.1 237813003 7888079 complement(2691620..2692369) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02211; lipoprotein releasing system, ATP-binding protein 2692369 lolD 7888079 lolD Burkholderia pseudomallei MSHR346 lipoprotein releasing system, ATP-binding protein YP_002897454.1 2691620 R 536230 CDS YP_002897455.1 237813004 7890586 complement(2692362..2693615) 1 NC_012695.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212; lipoprotein releasing system, hypothetical protein, LolC/E family 2693615 7890586 GBP346_A2764 Burkholderia pseudomallei MSHR346 lipoprotein releasing system, hypothetical protein, LolC/E family YP_002897455.1 2692362 R 536230 CDS YP_002897456.1 237813005 7888362 2693634..2694017 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2694017 7888362 GBP346_A2765 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897456.1 2693634 D 536230 CDS YP_002897457.1 237813006 7888837 complement(2694053..2694199) 1 NC_012695.1 hypothetical protein 2694199 7888837 GBP346_A2766 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897457.1 2694053 R 536230 CDS YP_002897458.1 237813007 7887009 2694188..2695264 1 NC_012695.1 hypothetical protein 2695264 7887009 GBP346_A2767 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897458.1 2694188 D 536230 CDS YP_002897459.1 237813008 7888048 2695280..2696974 1 NC_012695.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 2696974 recJ 7888048 recJ Burkholderia pseudomallei MSHR346 single-stranded-DNA-specific exonuclease RecJ YP_002897459.1 2695280 D 536230 CDS YP_002897460.1 237813009 7887854 join(2697335..2697417,2697419..2698439) 1 NC_012695.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2698439 prfB 7887854 prfB Burkholderia pseudomallei MSHR346 peptide chain release factor 2 YP_002897460.1 2697335 D 536230 CDS YP_002897461.1 237813010 7888187 2698533..2700059 1 NC_012695.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2700059 lysS 7888187 lysS Burkholderia pseudomallei MSHR346 lysyl-tRNA synthetase YP_002897461.1 2698533 D 536230 CDS YP_002897462.1 237813011 7888149 2700410..2701135 1 NC_012695.1 identified by match to protein family HMM PF05433; 17 kDa surface antigen 2701135 7888149 GBP346_A2771 Burkholderia pseudomallei MSHR346 17 kDa surface antigen YP_002897462.1 2700410 D 536230 CDS YP_002897463.1 237813012 7889854 complement(2701264..2701563) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2701563 7889854 GBP346_A2772 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897463.1 2701264 R 536230 CDS YP_002897464.1 237813013 7888567 complement(2701560..2701769) 1 NC_012695.1 identified by match to protein family HMM PF04384; match to protein family HMM TIGR03412; FeS assembly protein IscX 2701769 iscX 7888567 iscX Burkholderia pseudomallei MSHR346 FeS assembly protein IscX YP_002897464.1 2701560 R 536230 CDS YP_002897465.1 237813014 7887513 complement(2701788..2702129) 1 NC_012695.1 identified by match to protein family HMM PF00111; match to protein family HMM TIGR02007; ferredoxin, 2Fe-2S type, ISC system 2702129 fdx 7887513 fdx Burkholderia pseudomallei MSHR346 ferredoxin, 2Fe-2S type, ISC system YP_002897465.1 2701788 R 536230 CDS YP_002897466.1 237813015 7889948 complement(2702222..2704090) 1 NC_012695.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 2704090 hscA 7889948 hscA Burkholderia pseudomallei MSHR346 chaperone protein HscA YP_002897466.1 2702222 R 536230 CDS YP_002897467.1 237813016 7888558 complement(2704148..2704666) 1 NC_012695.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 2704666 hscB 7888558 hscB Burkholderia pseudomallei MSHR346 co-chaperone HscB YP_002897467.1 2704148 R 536230 CDS YP_002897468.1 237813017 7890128 complement(2704788..2705111) 1 NC_012695.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; match to protein family HMM TIGR02011; iron-sulfur cluster assembly protein IscA 2705111 iscA 7890128 iscA Burkholderia pseudomallei MSHR346 iron-sulfur cluster assembly protein IscA YP_002897468.1 2704788 R 536230 CDS YP_002897469.1 237813018 7888614 complement(2705194..2705601) 1 NC_012695.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01999; scaffold protein 2705601 iscU 7888614 iscU Burkholderia pseudomallei MSHR346 scaffold protein YP_002897469.1 2705194 R 536230 CDS YP_002897470.1 237813019 7887673 complement(2705667..2706890) 1 NC_012695.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2706890 iscS 7887673 iscS Burkholderia pseudomallei MSHR346 cysteine desulfurase YP_002897470.1 2705667 R 536230 CDS YP_002897471.1 237813020 7888032 complement(2706959..2707498) 1 NC_012695.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; match to protein family HMM TIGR02010; iron-sulfur cluster assembly transcription factor IscR 2707498 7888032 GBP346_A2780 Burkholderia pseudomallei MSHR346 iron-sulfur cluster assembly transcription factor IscR YP_002897471.1 2706959 R 536230 CDS YP_002897472.1 237813021 7890310 complement(2707600..2708094) 1 NC_012695.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 2708094 7890310 GBP346_A2781 Burkholderia pseudomallei MSHR346 low molecular weight protein-tyrosine-phosphatase YP_002897472.1 2707600 R 536230 CDS YP_002897473.1 237813022 7887127 complement(2708171..2708398) 1 NC_012695.1 hypothetical protein 2708398 7887127 GBP346_A2782 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897473.1 2708171 R 536230 CDS YP_002897474.1 237813023 7887693 complement(2708542..2709993) 1 NC_012695.1 identified by match to protein family HMM PF02589; iron-sulfur cluster binding protein 2709993 7887693 GBP346_A2783 Burkholderia pseudomallei MSHR346 iron-sulfur cluster binding protein YP_002897474.1 2708542 R 536230 CDS YP_002897475.1 237813024 7888690 complement(2710135..2710857) 1 NC_012695.1 identified by match to protein family HMM PF02754; cysteine-rich domain protein 2710857 7888690 GBP346_A2784 Burkholderia pseudomallei MSHR346 cysteine-rich domain protein YP_002897475.1 2710135 R 536230 CDS YP_002897476.1 237813025 7890309 2711040..2711852 1 NC_012695.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 2711852 7890309 GBP346_A2785 Burkholderia pseudomallei MSHR346 transcriptional regulator, IclR family YP_002897476.1 2711040 D 536230 CDS YP_002897477.1 237813026 7887100 complement(2711968..2713047) 1 NC_012695.1 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase family protein 2713047 7887100 GBP346_A2786 Burkholderia pseudomallei MSHR346 D-alanyl-D-alanine carboxypeptidase family protein YP_002897477.1 2711968 R 536230 CDS YP_002897478.1 237813027 7887702 complement(2713421..2713546) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2713546 7887702 GBP346_A2787 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897478.1 2713421 R 536230 CDS YP_002897479.1 237813028 7889313 2713753..2714328 1 NC_012695.1 identified by match to protein family HMM PF09361; match to protein family HMM TIGR01841; phasin family protein 2714328 7889313 GBP346_A2788 Burkholderia pseudomallei MSHR346 phasin family protein YP_002897479.1 2713753 D 536230 CDS YP_002897480.1 237813029 7890437 2714417..2715898 1 NC_012695.1 identified by match to protein family HMM PF01609; ISBma2, transposase 2715898 7890437 GBP346_A2789 Burkholderia pseudomallei MSHR346 ISBma2, transposase YP_002897480.1 2714417 D 536230 CDS YP_002897481.1 237813030 7890878 complement(2716204..2717979) 1 NC_012695.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoyl dehydrogenase 2717979 lpdA_2 7890878 lpdA_2 Burkholderia pseudomallei MSHR346 dihydrolipoyl dehydrogenase YP_002897481.1 2716204 R 536230 CDS YP_002897482.1 237813031 7890149 complement(2718286..2719929) 1 NC_012695.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR01348; dihydrolipoamide acetyltransferase 2719929 aceF 7890149 aceF Burkholderia pseudomallei MSHR346 dihydrolipoamide acetyltransferase YP_002897482.1 2718286 R 536230 CDS YP_002897483.1 237813032 7888652 complement(2720062..2722758) 1 NC_012695.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 2722758 aceE 7888652 aceE Burkholderia pseudomallei MSHR346 pyruvate dehydrogenase subunit E1 YP_002897483.1 2720062 R 536230 CDS YP_002897484.1 237813033 7888718 complement(2722890..2723111) 1 NC_012695.1 hypothetical protein 2723111 7888718 GBP346_A2793 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897484.1 2722890 R 536230 CDS YP_002897485.1 237813034 7890616 2723172..2725541 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; sensory box histidine kinase 2725541 7890616 GBP346_A2794 Burkholderia pseudomallei MSHR346 sensory box histidine kinase YP_002897485.1 2723172 D 536230 CDS YP_002897486.1 237813035 7890225 2725538..2726176 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281; transcriptional regulatory protein FixJ 2726176 7890225 GBP346_A2795 Burkholderia pseudomallei MSHR346 transcriptional regulatory protein FixJ YP_002897486.1 2725538 D 536230 CDS YP_002897487.1 237813036 7887479 2726493..2727350 1 NC_012695.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2727350 7887479 GBP346_A2796 Burkholderia pseudomallei MSHR346 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002897487.1 2726493 D 536230 CDS YP_002897488.1 237813037 7889465 complement(2727828..2727989) 1 NC_012695.1 hypothetical protein 2727989 7889465 GBP346_A2797 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897488.1 2727828 R 536230 CDS YP_002897489.1 237813038 7888781 2728123..2730222 1 NC_012695.1 identified by match to protein family HMM PF01432; oligopeptidase A 2730222 7888781 GBP346_A2798 Burkholderia pseudomallei MSHR346 oligopeptidase A YP_002897489.1 2728123 D 536230 CDS YP_002897490.1 237813039 7889789 complement(2730353..2731573) 1 NC_012695.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2731573 dinB 7889789 dinB Burkholderia pseudomallei MSHR346 DNA polymerase IV YP_002897490.1 2730353 R 536230 CDS YP_002897491.1 237813040 7888623 2731526..2731810 1 NC_012695.1 hypothetical protein 2731810 7888623 GBP346_A2800 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897491.1 2731526 D 536230 CDS YP_002897492.1 237813041 7889215 2732312..2733592 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, nitrate/nitrite porter (NNP) family 2733592 narD_1 7889215 narD_1 Burkholderia pseudomallei MSHR346 transporter, nitrate/nitrite porter (NNP) family YP_002897492.1 2732312 D 536230 CDS YP_002897493.1 237813042 7888011 2733636..2735021 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00886; nitrite extrusion protein 1 (Nitrite facilitator 1) 2735021 7888011 GBP346_A2803 Burkholderia pseudomallei MSHR346 nitrite extrusion protein 1 (Nitrite facilitator 1) YP_002897493.1 2733636 D 536230 CDS YP_002897494.1 237813043 7886725 complement(2735134..2735280) 1 NC_012695.1 hypothetical protein 2735280 7886725 GBP346_A2804 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897494.1 2735134 R 536230 CDS YP_002897495.1 237813044 7890665 2735272..2738997 1 NC_012695.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01580; nitrate reductase, alpha subunit 2738997 7890665 GBP346_A2805 Burkholderia pseudomallei MSHR346 nitrate reductase, alpha subunit YP_002897495.1 2735272 D 536230 CDS YP_002897496.1 237813045 7888176 2738994..2740547 1 NC_012695.1 identified by match to protein family HMM TIGR01660; nitrate reductase, beta subunit 2740547 narH_1 7888176 narH_1 Burkholderia pseudomallei MSHR346 nitrate reductase, beta subunit YP_002897496.1 2738994 D 536230 CDS YP_002897497.1 237813046 7890087 2740544..2741248 1 NC_012695.1 identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684; nitrate reductase, delta subunit 2741248 7890087 GBP346_A2807 Burkholderia pseudomallei MSHR346 nitrate reductase, delta subunit YP_002897497.1 2740544 D 536230 CDS YP_002897498.1 237813047 7888962 2741285..2741971 1 NC_012695.1 identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351; respiratory nitrate reductase, gamma subunit 2741971 narI_1 7888962 narI_1 Burkholderia pseudomallei MSHR346 respiratory nitrate reductase, gamma subunit YP_002897498.1 2741285 D 536230 CDS YP_002897499.1 237813048 7889380 2742113..2744047 1 NC_012695.1 identified by match to protein family HMM PF00672; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; nitrate/nitrite sensor protein NarX 2744047 7889380 GBP346_A2809 Burkholderia pseudomallei MSHR346 nitrate/nitrite sensor protein NarX YP_002897499.1 2742113 D 536230 CDS YP_002897500.1 237813049 7888948 2744071..2744772 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04967; transcriptional regulatory protein DegU (Protease production enhancerprotein) 2744772 7888948 GBP346_A2810 Burkholderia pseudomallei MSHR346 transcriptional regulatory protein DegU (Protease production enhancerprotein) YP_002897500.1 2744071 D 536230 CDS YP_002897501.1 237813050 7887318 2744918..2745694 1 NC_012695.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 2745694 xth_2 7887318 xth_2 Burkholderia pseudomallei MSHR346 exodeoxyribonuclease III YP_002897501.1 2744918 D 536230 CDS YP_002897502.1 237813051 7889926 complement(2745983..2747518) 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR01818; nitrogen regulation protein 2747518 ntrC 7889926 ntrC Burkholderia pseudomallei MSHR346 nitrogen regulation protein YP_002897502.1 2745983 R 536230 CDS YP_002897503.1 237813052 7888999 complement(2747556..2748698) 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; nitrogen regulation protein NR(II) 2748698 ntrB 7888999 ntrB Burkholderia pseudomallei MSHR346 nitrogen regulation protein NR(II) YP_002897503.1 2747556 R 536230 CDS YP_002897504.1 237813053 7889418 complement(2748865..2750280) 1 NC_012695.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 2750280 glnA 7889418 glnA Burkholderia pseudomallei MSHR346 glutamine synthetase, type I YP_002897504.1 2748865 R 536230 CDS YP_002897505.1 237813054 7889934 complement(2750329..2750523) 1 NC_012695.1 hypothetical protein 2750523 7889934 GBP346_A2815 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897505.1 2750329 R 536230 CDS YP_002897506.1 237813055 7889658 2750685..2751149 1 NC_012695.1 rhodanese domain protein 2751149 7889658 GBP346_A2816 Burkholderia pseudomallei MSHR346 rhodanese domain protein YP_002897506.1 2750685 D 536230 CDS YP_002897507.1 237813056 7889058 complement(2751402..2752220) 1 NC_012695.1 identified by match to protein family HMM PF00994; molybdopterin-binding protein 2752220 7889058 GBP346_A2817 Burkholderia pseudomallei MSHR346 molybdopterin-binding protein YP_002897507.1 2751402 R 536230 CDS YP_002897508.1 237813057 7889630 complement(2752217..2753050) 1 NC_012695.1 hypothetical protein 2753050 7889630 GBP346_A2818 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897508.1 2752217 R 536230 CDS YP_002897509.1 237813058 7889135 2753106..2753372 1 NC_012695.1 hypothetical protein 2753372 7889135 GBP346_A2819 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897509.1 2753106 D 536230 CDS YP_002897510.1 237813059 7888585 complement(2753587..2754576) 1 NC_012695.1 identified by match to protein family HMM PF04116; fatty acid hydroxylase 2754576 7888585 GBP346_A2820 Burkholderia pseudomallei MSHR346 fatty acid hydroxylase YP_002897510.1 2753587 R 536230 CDS YP_002897511.1 237813060 7890147 complement(2754593..2755585) 1 NC_012695.1 identified by match to protein family HMM PF02239; 40-residue yvtn family beta-propeller repeat protein 2755585 7890147 GBP346_A2821 Burkholderia pseudomallei MSHR346 40-residue yvtn family beta-propeller repeat protein YP_002897511.1 2754593 R 536230 CDS YP_002897512.1 237813061 7888329 complement(2755592..2755708) 1 NC_012695.1 hypothetical protein 2755708 7888329 GBP346_A2822 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897512.1 2755592 R 536230 CDS YP_002897513.1 237813062 7890763 complement(2755687..2759814) 1 NC_012695.1 identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA 2759814 hrpA 7890763 hrpA Burkholderia pseudomallei MSHR346 ATP-dependent helicase HrpA YP_002897513.1 2755687 R 536230 CDS YP_002897514.1 237813063 7888468 2759838..2761214 1 NC_012695.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2761214 argA 7888468 argA Burkholderia pseudomallei MSHR346 N-acetylglutamate synthase YP_002897514.1 2759838 D 536230 CDS YP_002897515.1 237813064 7887998 2761267..2761542 1 NC_012695.1 identified by match to protein family HMM PF04362; hypothetical protein 2761542 7887998 GBP346_A2825 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897515.1 2761267 D 536230 CDS YP_002897516.1 237813065 7889734 complement(2761716..2763047) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; transporter, major facilitator family 2763047 7889734 GBP346_A2826 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002897516.1 2761716 R 536230 CDS YP_002897517.1 237813066 7887774 complement(2763044..2763259) 1 NC_012695.1 hypothetical protein 2763259 7887774 GBP346_A2827 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897517.1 2763044 R 536230 CDS YP_002897518.1 237813067 7887032 complement(2763256..2764800) 1 NC_012695.1 identified by match to protein family HMM PF02515; caib/baif family protein 2764800 7887032 GBP346_A2828 Burkholderia pseudomallei MSHR346 caib/baif family protein YP_002897518.1 2763256 R 536230 CDS YP_002897519.1 237813068 7888114 complement(2764797..2766584) 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain protein 2766584 7888114 GBP346_A2829 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase domain protein YP_002897519.1 2764797 R 536230 CDS YP_002897520.1 237813069 7888531 2766693..2767595 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2767595 7888531 GBP346_A2830 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002897520.1 2766693 D 536230 CDS YP_002897521.1 237813070 7889210 complement(2767982..2768782) 1 NC_012695.1 hypothetical protein 2768782 7889210 GBP346_A2832 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897521.1 2767982 R 536230 CDS YP_002897522.1 237813071 7890675 complement(2769022..2769507) 1 NC_012695.1 hypothetical protein 2769507 7890675 GBP346_A2833 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897522.1 2769022 R 536230 CDS YP_002897523.1 237813072 7889610 complement(2769724..2771151) 1 NC_012695.1 identified by match to protein family HMM PF00202; putative aminotransferase 2771151 7889610 GBP346_A2834 Burkholderia pseudomallei MSHR346 putative aminotransferase YP_002897523.1 2769724 R 536230 CDS YP_002897524.1 237813073 7887303 complement(2771186..2772520) 1 NC_012695.1 identified by match to protein family HMM PF00120; glutamine synthetase family protein 2772520 7887303 GBP346_A2835 Burkholderia pseudomallei MSHR346 glutamine synthetase family protein YP_002897524.1 2771186 R 536230 CDS YP_002897525.1 237813074 7890956 complement(2772553..2773584) 1 NC_012695.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase, class I 2773584 7890956 GBP346_A2836 Burkholderia pseudomallei MSHR346 glutamine amidotransferase, class I YP_002897525.1 2772553 R 536230 CDS YP_002897526.1 237813075 7888979 complement(2773641..2773844) 1 NC_012695.1 hypothetical protein 2773844 7888979 GBP346_A2837 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897526.1 2773641 R 536230 CDS YP_002897527.1 237813076 7890085 2774152..2774358 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2774358 7890085 GBP346_A2839 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897527.1 2774152 D 536230 CDS YP_002897528.1 237813077 7889107 complement(2774352..2775155) 1 NC_012695.1 identified by match to protein family HMM PF05013; match to protein family HMM TIGR02017; N-formylglutamate deformylase 2775155 hutG 7889107 hutG Burkholderia pseudomallei MSHR346 N-formylglutamate deformylase YP_002897528.1 2774352 R 536230 CDS YP_002897529.1 237813078 7886813 complement(2775152..2775346) 1 NC_012695.1 hypothetical protein 2775346 7886813 GBP346_A2840 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897529.1 2775152 R 536230 CDS YP_002897530.1 237813079 7886822 complement(2775399..2776781) 1 NC_012695.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2776781 hutF 7886822 hutF Burkholderia pseudomallei MSHR346 N-formimino-L-glutamate deiminase YP_002897530.1 2775399 R 536230 CDS YP_002897531.1 237813080 7889986 complement(2776795..2778018) 1 NC_012695.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 2778018 hutI 7889986 hutI Burkholderia pseudomallei MSHR346 imidazolonepropionase YP_002897531.1 2776795 R 536230 CDS YP_002897532.1 237813081 7888629 complement(2778015..2778653) 1 NC_012695.1 identified by match to protein family HMM PF05962; hypothetical protein 2778653 7888629 GBP346_A2843 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897532.1 2778015 R 536230 CDS YP_002897533.1 237813082 7887508 complement(2778674..2780362) 1 NC_012695.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2780362 hutU_2 7887508 hutU_2 Burkholderia pseudomallei MSHR346 urocanate hydratase YP_002897533.1 2778674 R 536230 CDS YP_002897534.1 237813083 7889641 complement(2780405..2781100) 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02018; histidine utilization repressor 2781100 hutC 7889641 hutC Burkholderia pseudomallei MSHR346 histidine utilization repressor YP_002897534.1 2780405 R 536230 CDS YP_002897535.1 237813084 7886717 complement(2781105..2782628) 1 NC_012695.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 2782628 hutH 7886717 hutH Burkholderia pseudomallei MSHR346 histidine ammonia-lyase YP_002897535.1 2781105 R 536230 CDS YP_002897536.1 237813085 7887268 2782868..2783035 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2783035 7887268 GBP346_A2847 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897536.1 2782868 D 536230 CDS YP_002897537.1 237813086 7887005 complement(2783297..2784088) 1 NC_012695.1 identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase family protein 2784088 7887005 GBP346_A2848 Burkholderia pseudomallei MSHR346 4'-phosphopantetheinyl transferase family protein YP_002897537.1 2783297 R 536230 CDS YP_002897538.1 237813087 7888698 complement(2784193..2785203) 1 NC_012695.1 hypothetical protein 2785203 7888698 GBP346_A2849 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897538.1 2784193 R 536230 CDS YP_002897539.1 237813088 7890062 complement(2785221..2785856) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 4'-phosphopantetheinyl transferase family protein 2785856 7890062 GBP346_A2850 Burkholderia pseudomallei MSHR346 4'-phosphopantetheinyl transferase family protein YP_002897539.1 2785221 R 536230 CDS YP_002897540.1 237813089 7889048 complement(2786404..2787129) 1 NC_012695.1 identified by match to protein family HMM PF00196; match to protein family HMM PF03472; match to protein family HMM PF04967; autoinducer-binding transcriptional regulator, LuxR family 2787129 7889048 GBP346_A2851 Burkholderia pseudomallei MSHR346 autoinducer-binding transcriptional regulator, LuxR family YP_002897540.1 2786404 R 536230 CDS YP_002897541.1 237813090 7886995 complement(2787211..2787351) 1 NC_012695.1 hypothetical protein 2787351 7886995 GBP346_A2852 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897541.1 2787211 R 536230 CDS YP_002897542.1 237813091 7890127 complement(2787400..2787633) 1 NC_012695.1 hypothetical protein 2787633 7890127 GBP346_A2853 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897542.1 2787400 R 536230 CDS YP_002897543.1 237813092 7888413 complement(2787863..2787982) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2787982 7888413 GBP346_A2854 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897543.1 2787863 R 536230 CDS YP_002897544.1 237813093 7887926 complement(2787982..2788602) 1 NC_012695.1 identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455; adenylyl-sulfate kinase 2788602 cysC_2 7887926 cysC_2 Burkholderia pseudomallei MSHR346 adenylyl-sulfate kinase YP_002897544.1 2787982 R 536230 CDS YP_002897545.1 237813094 7888538 complement(2788733..2790193) 1 NC_012695.1 identified by match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 2790193 phrB 7888538 phrB Burkholderia pseudomallei MSHR346 deoxyribodipyrimidine photolyase YP_002897545.1 2788733 R 536230 CDS YP_002897546.1 237813095 7886746 2790613..2791779 1 NC_012695.1 identified by match to protein family HMM PF00487; alkane 1-monooxygenase 2791779 7886746 GBP346_A2857 Burkholderia pseudomallei MSHR346 alkane 1-monooxygenase YP_002897546.1 2790613 D 536230 CDS YP_002897547.1 237813096 7888076 complement(2792050..2792316) 1 NC_012695.1 hypothetical protein 2792316 7888076 GBP346_A2858 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897547.1 2792050 R 536230 CDS YP_002897548.1 237813097 7888112 2792549..2794837 1 NC_012695.1 nitric oxide reductase, subunit B 2794837 7888112 GBP346_A2859 Burkholderia pseudomallei MSHR346 nitric oxide reductase, subunit B YP_002897548.1 2792549 D 536230 CDS YP_002897549.1 237813098 7887137 2794917..2795261 1 NC_012695.1 identified by match to protein family HMM PF01883; mrp protein 2795261 7887137 GBP346_A2860 Burkholderia pseudomallei MSHR346 mrp protein YP_002897549.1 2794917 D 536230 CDS YP_002897550.1 237813099 7889672 2795316..2796449 1 NC_012695.1 putative lipoprotein 2796449 7889672 GBP346_A2861 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897550.1 2795316 D 536230 CDS YP_002897551.1 237813100 7888475 2796490..2797818 1 NC_012695.1 identified by match to protein family HMM PF05940; heme/copper membrane protein 2797818 7888475 GBP346_A2862 Burkholderia pseudomallei MSHR346 heme/copper membrane protein YP_002897551.1 2796490 D 536230 CDS YP_002897552.1 237813101 7888814 2797823..2798302 1 NC_012695.1 hypothetical protein 2798302 7888814 GBP346_A2863 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897552.1 2797823 D 536230 CDS YP_002897553.1 237813102 7888596 2798416..2800179 1 NC_012695.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2800179 nrdD 7888596 nrdD Burkholderia pseudomallei MSHR346 anaerobic ribonucleoside triphosphate reductase YP_002897553.1 2798416 D 536230 CDS YP_002897554.1 237813103 7888956 2800182..2800394 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; anaerobic ribonucleoside triphosphate reductase 2800394 7888956 GBP346_A2865 Burkholderia pseudomallei MSHR346 anaerobic ribonucleoside triphosphate reductase YP_002897554.1 2800182 D 536230 CDS YP_002897555.1 237813104 7887062 2800449..2801132 1 NC_012695.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR02495; anaerobic ribonucleoside-triphosphate reductase activating protein 2801132 7887062 GBP346_A2866 Burkholderia pseudomallei MSHR346 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002897555.1 2800449 D 536230 CDS YP_002897556.1 237813105 7890488 complement(2801212..2801343) 1 NC_012695.1 hypothetical protein 2801343 7890488 GBP346_A2867 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897556.1 2801212 R 536230 CDS YP_002897557.1 237813106 7889398 complement(2801380..2801826) 1 NC_012695.1 identified by match to protein family HMM PF08859; DGC domain superfamily 2801826 7889398 GBP346_A2868 Burkholderia pseudomallei MSHR346 DGC domain superfamily YP_002897557.1 2801380 R 536230 CDS YP_002897558.1 237813107 7888480 complement(2801866..2802345) 1 NC_012695.1 hypothetical protein 2802345 7888480 GBP346_A2869 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897558.1 2801866 R 536230 CDS YP_002897559.1 237813108 7889893 complement(2802401..2803288) 1 NC_012695.1 identified by match to protein family HMM PF01136; peptidase, U32 family 2803288 yhbV 7889893 yhbV Burkholderia pseudomallei MSHR346 peptidase, U32 family YP_002897559.1 2802401 R 536230 CDS YP_002897560.1 237813109 7887858 complement(2803329..2804363) 1 NC_012695.1 identified by match to protein family HMM PF01136; peptidase, U32 family 2804363 7887858 GBP346_A2871 Burkholderia pseudomallei MSHR346 peptidase, U32 family YP_002897560.1 2803329 R 536230 CDS YP_002897561.1 237813110 7889311 complement(2804360..2804479) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 2-nitropropane dioxygenase 2804479 7889311 GBP346_A2872 Burkholderia pseudomallei MSHR346 2-nitropropane dioxygenase YP_002897561.1 2804360 R 536230 CDS YP_002897562.1 237813111 7887609 complement(2804452..2805669) 1 NC_012695.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family 2805669 7887609 GBP346_A2873 Burkholderia pseudomallei MSHR346 oxidoreductase, 2-nitropropane dioxygenase family YP_002897562.1 2804452 R 536230 CDS YP_002897563.1 237813112 7887721 2805835..2807205 1 NC_012695.1 hypothetical protein 2807205 7887721 GBP346_A2875 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897563.1 2805835 D 536230 CDS YP_002897564.1 237813113 7886745 complement(2807182..2807874) 1 NC_012695.1 identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain protein 2807874 7886745 GBP346_A2874 Burkholderia pseudomallei MSHR346 cyclic nucleotide-binding domain protein YP_002897564.1 2807182 R 536230 CDS YP_002897565.1 237813114 7887291 complement(2807883..2809334) 1 NC_012695.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2809334 hemN_1 7887291 hemN_1 Burkholderia pseudomallei MSHR346 coproporphyrinogen III oxidase YP_002897565.1 2807883 R 536230 CDS YP_002897566.1 237813115 7888161 complement(2809483..2811405) 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein I 2811405 7888161 GBP346_A2877 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein I YP_002897566.1 2809483 R 536230 CDS YP_002897567.1 237813116 7889777 2811541..2811714 1 NC_012695.1 hypothetical protein 2811714 7889777 GBP346_A2878 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897567.1 2811541 D 536230 CDS YP_002897568.1 237813117 7887344 2811727..2811942 1 NC_012695.1 hypothetical protein 2811942 7887344 GBP346_A2879 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897568.1 2811727 D 536230 CDS YP_002897569.1 237813118 7886935 2811939..2813135 1 NC_012695.1 identified by match to protein family HMM PF05940; heme/copper membrane protein 2813135 7886935 GBP346_A2881 Burkholderia pseudomallei MSHR346 heme/copper membrane protein YP_002897569.1 2811939 D 536230 CDS YP_002897570.1 237813119 7888332 complement(2813096..2813347) 1 NC_012695.1 hypothetical protein 2813347 7888332 GBP346_A2880 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897570.1 2813096 R 536230 CDS YP_002897571.1 237813120 7890935 2813624..2815078 1 NC_012695.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2815078 sufB 7890935 sufB Burkholderia pseudomallei MSHR346 cysteine desulfurase activator complex subunit SufB YP_002897571.1 2813624 D 536230 CDS YP_002897572.1 237813121 7889778 2815108..2815878 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 2815878 sufC 7889778 sufC Burkholderia pseudomallei MSHR346 FeS assembly ATPase SufC YP_002897572.1 2815108 D 536230 CDS YP_002897573.1 237813122 7887954 2815883..2817118 1 NC_012695.1 identified by match to protein family HMM PF01458; SufB/sufD domain protein 2817118 7887954 GBP346_A2884 Burkholderia pseudomallei MSHR346 SufB/sufD domain protein YP_002897573.1 2815883 D 536230 CDS YP_002897574.1 237813123 7889606 2817111..2818352 1 NC_012695.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01212; cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) 2818352 7889606 GBP346_A2885 Burkholderia pseudomallei MSHR346 cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) YP_002897574.1 2817111 D 536230 CDS YP_002897575.1 237813124 7890888 2818349..2818840 1 NC_012695.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; SUF system FeS assembly protein, NifU family 2818840 7890888 GBP346_A2886 Burkholderia pseudomallei MSHR346 SUF system FeS assembly protein, NifU family YP_002897575.1 2818349 D 536230 CDS YP_002897576.1 237813125 7886851 2818837..2819385 1 NC_012695.1 identified by match to protein family HMM PF01883; match to protein family HMM TIGR03406; probable FeS assembly SUF system protein SufT 2819385 sufT 7886851 sufT Burkholderia pseudomallei MSHR346 probable FeS assembly SUF system protein SufT YP_002897576.1 2818837 D 536230 CDS YP_002897577.1 237813126 7889238 complement(2819512..2819724) 1 NC_012695.1 hypothetical protein 2819724 7889238 GBP346_A2888 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897577.1 2819512 R 536230 CDS YP_002897578.1 237813127 7890536 complement(2819678..2820076) 1 NC_012695.1 hypothetical protein 2820076 7890536 GBP346_A2889 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897578.1 2819678 R 536230 CDS YP_002897579.1 237813128 7889915 2820168..2820656 1 NC_012695.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; putative transcriptional regulator 2820656 7889915 GBP346_A2890 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002897579.1 2820168 D 536230 CDS YP_002897580.1 237813129 7887756 complement(2820874..2821299) 1 NC_012695.1 identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; cation-binding hemerythrin HHE family protein 2821299 7887756 GBP346_A2891 Burkholderia pseudomallei MSHR346 cation-binding hemerythrin HHE family protein YP_002897580.1 2820874 R 536230 CDS YP_002897581.1 237813130 7890407 2821362..2821511 1 NC_012695.1 hypothetical protein 2821511 7890407 GBP346_A2892 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897581.1 2821362 D 536230 CDS YP_002897582.1 237813131 7888731 2821543..2821668 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; ubiquinol oxidase, subunit II 2821668 7888731 GBP346_A2893 Burkholderia pseudomallei MSHR346 ubiquinol oxidase, subunit II YP_002897582.1 2821543 D 536230 CDS YP_002897583.1 237813132 7889367 2821678..2822568 1 NC_012695.1 identified by match to protein family HMM PF00116; match to protein family HMM PF06481; match to protein family HMM TIGR01433; ubiquinol oxidase, subunit II 2822568 cyoA 7889367 cyoA Burkholderia pseudomallei MSHR346 ubiquinol oxidase, subunit II YP_002897583.1 2821678 D 536230 CDS YP_002897584.1 237813133 7890271 2822572..2824578 1 NC_012695.1 identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843; cytochrome o ubiquinol oxidase, subunit I 2824578 cyoB_1 7890271 cyoB_1 Burkholderia pseudomallei MSHR346 cytochrome o ubiquinol oxidase, subunit I YP_002897584.1 2822572 D 536230 CDS YP_002897585.1 237813134 7886804 2824578..2825183 1 NC_012695.1 identified by match to protein family HMM PF00510; match to protein family HMM TIGR02842; cytochrome o ubiquinol oxidase, subunit III 2825183 cyoC_1 7886804 cyoC_1 Burkholderia pseudomallei MSHR346 cytochrome o ubiquinol oxidase, subunit III YP_002897585.1 2824578 D 536230 CDS YP_002897586.1 237813135 7889545 2825184..2825516 1 NC_012695.1 identified by match to protein family HMM PF03626; match to protein family HMM TIGR02847; cytochrome o ubiquinol oxidase, subunit IV 2825516 cyoD_1 7889545 cyoD_1 Burkholderia pseudomallei MSHR346 cytochrome o ubiquinol oxidase, subunit IV YP_002897586.1 2825184 D 536230 CDS YP_002897587.1 237813136 7887553 2825628..2826902 1 NC_012695.1 identified by match to protein family HMM PF00487; fatty acid desaturase family protein 2826902 7887553 GBP346_A2898 Burkholderia pseudomallei MSHR346 fatty acid desaturase family protein YP_002897587.1 2825628 D 536230 CDS YP_002897588.1 237813137 7889631 complement(2826934..2827104) 1 NC_012695.1 hypothetical protein 2827104 7889631 GBP346_A2899 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897588.1 2826934 R 536230 CDS YP_002897589.1 237813138 7890856 complement(2827181..2827975) 1 NC_012695.1 identified by match to protein family HMM PF00497; putative lysine-arginine-ornithine-binding periplasmic protein 2827975 7890856 GBP346_A2900 Burkholderia pseudomallei MSHR346 putative lysine-arginine-ornithine-binding periplasmic protein YP_002897589.1 2827181 R 536230 CDS YP_002897590.1 237813139 7890630 2828074..2828739 1 NC_012695.1 identified by match to protein family HMM PF00043; glutathione S-transferase 2828739 7890630 GBP346_A2901 Burkholderia pseudomallei MSHR346 glutathione S-transferase YP_002897590.1 2828074 D 536230 CDS YP_002897591.1 237813140 7889808 complement(2828772..2829821) 1 NC_012695.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2829821 astE 7889808 astE Burkholderia pseudomallei MSHR346 succinylglutamate desuccinylase YP_002897591.1 2828772 R 536230 CDS YP_002897592.1 237813141 7888193 complement(2829805..2831145) 1 NC_012695.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2831145 astB 7888193 astB Burkholderia pseudomallei MSHR346 succinylarginine dihydrolase YP_002897592.1 2829805 R 536230 CDS YP_002897593.1 237813142 7888237 complement(2831159..2832622) 1 NC_012695.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 2832622 astD 7888237 astD Burkholderia pseudomallei MSHR346 succinylglutamic semialdehyde dehydrogenase YP_002897593.1 2831159 R 536230 CDS YP_002897594.1 237813143 7887849 complement(2832627..2833658) 1 NC_012695.1 identified by match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244; arginine N-succinyltransferase 2833658 astA 7887849 astA Burkholderia pseudomallei MSHR346 arginine N-succinyltransferase YP_002897594.1 2832627 R 536230 CDS YP_002897595.1 237813144 7887792 complement(2833655..2834713) 1 NC_012695.1 identified by match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03245; arginine/ornithine succinyltransferase, alpha subunit 2834713 aruF 7887792 aruF Burkholderia pseudomallei MSHR346 arginine/ornithine succinyltransferase, alpha subunit YP_002897595.1 2833655 R 536230 CDS YP_002897596.1 237813145 7889032 complement(2834758..2835990) 1 NC_012695.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 2835990 argD 7889032 argD Burkholderia pseudomallei MSHR346 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_002897596.1 2834758 R 536230 CDS YP_002897597.1 237813146 7887328 2836048..2836407 1 NC_012695.1 putative ion transporter 2836407 7887328 GBP346_A2908 Burkholderia pseudomallei MSHR346 putative ion transporter YP_002897597.1 2836048 D 536230 CDS YP_002897598.1 237813147 7890527 complement(2836730..2837776) 1 NC_012695.1 identified by match to protein family HMM PF00165; AraC family regulatory protein 2837776 7890527 GBP346_A2909 Burkholderia pseudomallei MSHR346 AraC family regulatory protein YP_002897598.1 2836730 R 536230 CDS YP_002897599.1 237813148 7889898 complement(2837795..2838589) 1 NC_012695.1 identified by match to protein family HMM PF00005; arginine/ornithine transport ATP-binding protein AotP 2838589 7889898 GBP346_A2910 Burkholderia pseudomallei MSHR346 arginine/ornithine transport ATP-binding protein AotP YP_002897599.1 2837795 R 536230 CDS YP_002897600.1 237813149 7889235 complement(2838611..2839324) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine ABC transporter, permease protein HisM 2839324 7889235 GBP346_A2911 Burkholderia pseudomallei MSHR346 histidine ABC transporter, permease protein HisM YP_002897600.1 2838611 R 536230 CDS YP_002897601.1 237813150 7887269 complement(2839321..2840010) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; histidine transport system permease protein HisQ 2840010 7887269 GBP346_A2912 Burkholderia pseudomallei MSHR346 histidine transport system permease protein HisQ YP_002897601.1 2839321 R 536230 CDS YP_002897602.1 237813151 7886713 2840021..2840182 1 NC_012695.1 hypothetical protein 2840182 7886713 GBP346_A2913 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897602.1 2840021 D 536230 CDS YP_002897603.1 237813152 7887760 complement(2840326..2840931) 1 NC_012695.1 hypothetical protein 2840931 7887760 GBP346_A2914 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897603.1 2840326 R 536230 CDS YP_002897604.1 237813153 7889971 complement(2841635..2842681) 1 NC_012695.1 identified by match to protein family HMM TIGR03476; hypothetical protein 2842681 7889971 GBP346_A2915 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897604.1 2841635 R 536230 CDS YP_002897605.1 237813154 7889328 complement(2842678..2843547) 1 NC_012695.1 identified by match to protein family HMM PF04794; match to protein family HMM TIGR03473; hopanoid biosynthesis associated protein HpnK 2843547 hpnK 7889328 hpnK Burkholderia pseudomallei MSHR346 hopanoid biosynthesis associated protein HpnK YP_002897605.1 2842678 R 536230 CDS YP_002897606.1 237813155 7888382 complement(2843551..2844996) 1 NC_012695.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471; hopanoid biosynthesis associated radical SAM protein HpnJ 2844996 hpnJ 7888382 hpnJ Burkholderia pseudomallei MSHR346 hopanoid biosynthesis associated radical SAM protein HpnJ YP_002897606.1 2843551 R 536230 CDS YP_002897607.1 237813156 7889892 complement(2845084..2846262) 1 NC_012695.1 identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472; hopanoid biosynthesis associated glycosyl transferase protein HpnI 2846262 hpnI_2 7889892 hpnI_2 Burkholderia pseudomallei MSHR346 hopanoid biosynthesis associated glycosyl transferase protein HpnI YP_002897607.1 2845084 R 536230 CDS YP_002897608.1 237813157 7887714 2846937..2847947 1 NC_012695.1 identified by match to protein family HMM PF00296; match to protein family HMM TIGR03558; luciferase family protein 2847947 7887714 GBP346_A2919 Burkholderia pseudomallei MSHR346 luciferase family protein YP_002897608.1 2846937 D 536230 CDS YP_002897609.1 237813158 7888911 complement(2848450..2849478) 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 2849478 7888911 GBP346_A2920 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002897609.1 2848450 R 536230 CDS YP_002897610.1 237813159 7887115 2849555..2849977 1 NC_012695.1 hypothetical protein 2849977 7887115 GBP346_A2921 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897610.1 2849555 D 536230 CDS YP_002897611.1 237813160 7890313 2850013..2850876 1 NC_012695.1 identified by match to protein family HMM TIGR00687; pyridoxal kinase 2850876 7890313 GBP346_A2922 Burkholderia pseudomallei MSHR346 pyridoxal kinase YP_002897611.1 2850013 D 536230 CDS YP_002897612.1 237813161 7888182 complement(2851279..2851497) 1 NC_012695.1 hypothetical protein 2851497 7888182 GBP346_A2923 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897612.1 2851279 R 536230 CDS YP_002897613.1 237813162 7889859 2851519..2853621 1 NC_012695.1 identified by match to protein family HMM PF04185; match to protein family HMM PF05506; match to protein family HMM TIGR01409; match to protein family HMM TIGR03396; phospholipase C, phosphocholine-specific 2853621 7889859 GBP346_A2924 Burkholderia pseudomallei MSHR346 phospholipase C, phosphocholine-specific YP_002897613.1 2851519 D 536230 CDS YP_002897614.1 237813163 7889329 2854429..2855577 1 NC_012695.1 identified by match to protein family HMM PF01094; putative periplasmic substrate-binding protein 2855577 7889329 GBP346_A2926 Burkholderia pseudomallei MSHR346 putative periplasmic substrate-binding protein YP_002897614.1 2854429 D 536230 CDS YP_002897615.1 237813164 7889964 complement(2855529..2855666) 1 NC_012695.1 hypothetical protein 2855666 7889964 GBP346_A2925 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897615.1 2855529 R 536230 CDS YP_002897616.1 237813165 7887610 2855676..2856848 1 NC_012695.1 identified by match to protein family HMM PF01266; oxidoreductase, FAD-binding family protein 2856848 7887610 GBP346_A2927 Burkholderia pseudomallei MSHR346 oxidoreductase, FAD-binding family protein YP_002897616.1 2855676 D 536230 CDS YP_002897617.1 237813166 7887990 complement(2857004..2857465) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2857465 7887990 GBP346_A2928 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897617.1 2857004 R 536230 CDS YP_002897618.1 237813167 7888893 complement(2857521..2858492) 1 NC_012695.1 hypothetical protein 2858492 7888893 GBP346_A2929 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897618.1 2857521 R 536230 CDS YP_002897619.1 237813168 7887121 complement(2858759..2859823) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 2859823 7887121 GBP346_A2930 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002897619.1 2858759 R 536230 CDS YP_002897620.1 237813169 7889750 2860271..2860387 1 NC_012695.1 hypothetical protein 2860387 7889750 GBP346_A2932 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897620.1 2860271 D 536230 CDS YP_002897621.1 237813170 7888122 complement(2860372..2860503) 1 NC_012695.1 hypothetical protein 2860503 7888122 GBP346_A2931 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897621.1 2860372 R 536230 CDS YP_002897622.1 237813171 7889113 2860390..2862255 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; putative ABC transporter, permease/ATP-binding protein 2862255 7889113 GBP346_A2933 Burkholderia pseudomallei MSHR346 putative ABC transporter, permease/ATP-binding protein YP_002897622.1 2860390 D 536230 CDS YP_002897623.1 237813172 7888510 complement(2862317..2863693) 1 NC_012695.1 identified by match to protein family HMM PF00982; match to protein family HMM TIGR02400; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 2863693 otsA_2 7888510 otsA_2 Burkholderia pseudomallei MSHR346 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_002897623.1 2862317 R 536230 CDS YP_002897624.1 237813173 7886925 complement(2863690..2864442) 1 NC_012695.1 identified by match to protein family HMM PF02358; match to protein family HMM PF08282; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; trehalose-phosphatase 2864442 otsB 7886925 otsB Burkholderia pseudomallei MSHR346 trehalose-phosphatase YP_002897624.1 2863690 R 536230 CDS YP_002897625.1 237813174 7887258 2864432..2864653 1 NC_012695.1 hypothetical protein 2864653 7887258 GBP346_A2937 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897625.1 2864432 D 536230 CDS YP_002897626.1 237813175 7887580 complement(2864635..2864895) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 2864895 7887580 GBP346_A2936 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897626.1 2864635 R 536230 CDS YP_002897627.1 237813176 7890430 2864876..2865535 1 NC_012695.1 identified by match to protein family HMM PF02630; SCO1/SenC family protein 2865535 7890430 GBP346_A2938 Burkholderia pseudomallei MSHR346 SCO1/SenC family protein YP_002897627.1 2864876 D 536230 CDS YP_002897628.1 237813177 7887661 2865562..2866008 1 NC_012695.1 identified by match to protein family HMM PF04314; hypothetical protein 2866008 7887661 GBP346_A2939 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897628.1 2865562 D 536230 CDS YP_002897629.1 237813178 7890134 2866019..2866891 1 NC_012695.1 identified by match to protein family HMM PF09678; membrane protein 2866891 7890134 GBP346_A2940 Burkholderia pseudomallei MSHR346 membrane protein YP_002897629.1 2866019 D 536230 CDS YP_002897630.1 237813179 7888965 complement(2867026..2867703) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2867703 7888965 GBP346_A2941 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897630.1 2867026 R 536230 CDS YP_002897631.1 237813180 7889501 complement(2867743..2868609) 1 NC_012695.1 identified by match to protein family HMM PF02678; match to protein family HMM PF05726; pirin domain protein 2868609 7889501 GBP346_A2942 Burkholderia pseudomallei MSHR346 pirin domain protein YP_002897631.1 2867743 R 536230 CDS YP_002897632.1 237813181 7889851 2868736..2869644 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 2869644 7889851 GBP346_A2943 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002897632.1 2868736 D 536230 CDS YP_002897633.1 237813182 7887091 2869715..2870323 1 NC_012695.1 GAF domain protein 2870323 7887091 GBP346_A2944 Burkholderia pseudomallei MSHR346 GAF domain protein YP_002897633.1 2869715 D 536230 CDS YP_002897634.1 237813183 7889202 complement(2872026..2872649) 1 NC_012695.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2872649 pgsA 7889202 pgsA Burkholderia pseudomallei MSHR346 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002897634.1 2872026 R 536230 CDS YP_002897635.1 237813184 7889600 complement(2872747..2874990) 1 NC_012695.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2874990 uvrC 7889600 uvrC Burkholderia pseudomallei MSHR346 excinuclease ABC subunit C YP_002897635.1 2872747 R 536230 CDS YP_002897636.1 237813185 7887505 complement(2874993..2875157) 1 NC_012695.1 hypothetical protein 2875157 7887505 GBP346_A2950 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897636.1 2874993 R 536230 CDS YP_002897637.1 237813186 7888591 2875205..2876425 1 NC_012695.1 hypothetical protein 2876425 7888591 GBP346_A2951 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897637.1 2875205 D 536230 CDS YP_002897638.1 237813187 7889075 2876615..2877172 1 NC_012695.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2877172 efp 7889075 efp Burkholderia pseudomallei MSHR346 elongation factor P YP_002897638.1 2876615 D 536230 CDS YP_002897639.1 237813188 7889621 complement(2877225..2877365) 1 NC_012695.1 hypothetical protein 2877365 7889621 GBP346_A2953 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897639.1 2877225 R 536230 CDS YP_002897640.1 237813189 7886815 2877443..2878840 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent DNA-binding response regulator, Fis family 2878840 7886815 GBP346_A2954 Burkholderia pseudomallei MSHR346 sigma-54 dependent DNA-binding response regulator, Fis family YP_002897640.1 2877443 D 536230 CDS YP_002897641.1 237813190 7887957 complement(2878954..2879982) 1 NC_012695.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2879982 7887957 GBP346_A2955 Burkholderia pseudomallei MSHR346 beta-hexosaminidase YP_002897641.1 2878954 R 536230 CDS YP_002897642.1 237813191 7889847 complement(2880010..2880441) 1 NC_012695.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2880441 acpS 7889847 acpS Burkholderia pseudomallei MSHR346 4'-phosphopantetheinyl transferase YP_002897642.1 2880010 R 536230 CDS YP_002897643.1 237813192 7887094 complement(2880447..2881220) 1 NC_012695.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2881220 pdxJ 7887094 pdxJ Burkholderia pseudomallei MSHR346 pyridoxine 5'-phosphate synthase YP_002897643.1 2880447 R 536230 CDS YP_002897644.1 237813193 7890719 complement(2881217..2882044) 1 NC_012695.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2882044 recO 7890719 recO Burkholderia pseudomallei MSHR346 DNA repair protein RecO YP_002897644.1 2881217 R 536230 CDS YP_002897645.1 237813194 7889333 complement(2882064..2882963) 1 NC_012695.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2882963 era 7889333 era Burkholderia pseudomallei MSHR346 GTP-binding protein Era YP_002897645.1 2882064 R 536230 CDS YP_002897646.1 237813195 7890496 complement(2883033..2884436) 1 NC_012695.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2884436 7890496 GBP346_A2960 Burkholderia pseudomallei MSHR346 ribonuclease III YP_002897646.1 2883033 R 536230 CDS YP_002897647.1 237813196 7889965 complement(2884587..2885480) 1 NC_012695.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 2885480 lepB 7889965 lepB Burkholderia pseudomallei MSHR346 signal peptidase I YP_002897647.1 2884587 R 536230 CDS YP_002897648.1 237813197 7887749 complement(2885496..2887289) 1 NC_012695.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2887289 lepA 7887749 lepA Burkholderia pseudomallei MSHR346 GTP-binding protein LepA YP_002897648.1 2885496 R 536230 CDS YP_002897649.1 237813198 7889524 complement(2887530..2887784) 1 NC_012695.1 identified by match to protein family HMM PF05768; hypothetical protein 2887784 7889524 GBP346_A2963 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897649.1 2887530 R 536230 CDS YP_002897650.1 237813199 7890779 complement(2887781..2889289) 1 NC_012695.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; putative serine protease MucD 2889289 7890779 GBP346_A2964 Burkholderia pseudomallei MSHR346 putative serine protease MucD YP_002897650.1 2887781 R 536230 CDS YP_002897651.1 237813200 7888455 complement(2889306..2890349) 1 NC_012695.1 identified by match to protein family HMM PF03888; sigma factor negative regulatory protein, MucB/ResB family 2890349 7888455 GBP346_A2965 Burkholderia pseudomallei MSHR346 sigma factor negative regulatory protein, MucB/ResB family YP_002897651.1 2889306 R 536230 CDS YP_002897652.1 237813201 7888232 complement(2890364..2891002) 1 NC_012695.1 identified by match to protein family HMM PF03872; sigma factor negative regulatory protein, RseA family 2891002 7888232 GBP346_A2966 Burkholderia pseudomallei MSHR346 sigma factor negative regulatory protein, RseA family YP_002897652.1 2890364 R 536230 CDS YP_002897653.1 237813202 7889774 complement(2891050..2891649) 1 NC_012695.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2891649 rpoE 7889774 rpoE Burkholderia pseudomallei MSHR346 RNA polymerase sigma factor RpoE YP_002897653.1 2891050 R 536230 CDS YP_002897654.1 237813203 7887215 complement(2891755..2892228) 1 NC_012695.1 hypothetical protein 2892228 7887215 GBP346_A2968 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897654.1 2891755 R 536230 CDS YP_002897655.1 237813204 7890682 complement(2892240..2893478) 1 NC_012695.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2893478 fabF 7890682 fabF Burkholderia pseudomallei MSHR346 3-oxoacyl-(acyl carrier protein) synthase II YP_002897655.1 2892240 R 536230 CDS YP_002897656.1 237813205 7890634 complement(2893635..2893874) 1 NC_012695.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2893874 acpP 7890634 acpP Burkholderia pseudomallei MSHR346 acyl carrier protein YP_002897656.1 2893635 R 536230 CDS YP_002897657.1 237813206 7888135 complement(2894018..2894767) 1 NC_012695.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 2894767 fabG 7888135 fabG Burkholderia pseudomallei MSHR346 3-ketoacyl-(acyl-carrier-protein) reductase YP_002897657.1 2894018 R 536230 CDS YP_002897658.1 237813207 7889467 complement(2894818..2895750) 1 NC_012695.1 identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 2895750 fabD_1 7889467 fabD_1 Burkholderia pseudomallei MSHR346 malonyl CoA-acyl carrier protein transacylase YP_002897658.1 2894818 R 536230 CDS YP_002897659.1 237813208 7888955 complement(2895821..2896810) 1 NC_012695.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 2896810 7888955 GBP346_A2973 Burkholderia pseudomallei MSHR346 3-oxoacyl-(acyl carrier protein) synthase III YP_002897659.1 2895821 R 536230 CDS YP_002897660.1 237813209 7889784 complement(2896810..2897916) 1 NC_012695.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2897916 plsX 7889784 plsX Burkholderia pseudomallei MSHR346 putative glycerol-3-phosphate acyltransferase PlsX YP_002897660.1 2896810 R 536230 CDS YP_002897661.1 237813210 7887566 complement(2898056..2898235) 1 NC_012695.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2898235 rpmF 7887566 rpmF Burkholderia pseudomallei MSHR346 50S ribosomal protein L32 YP_002897661.1 2898056 R 536230 CDS YP_002897662.1 237813211 7890424 complement(2898332..2898964) 1 NC_012695.1 identified by match to protein family HMM PF02620; hypothetical protein 2898964 7890424 GBP346_A2976 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897662.1 2898332 R 536230 CDS YP_002897663.1 237813212 7890942 2899208..2899855 1 NC_012695.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2899855 maf_2 7890942 maf_2 Burkholderia pseudomallei MSHR346 Maf-like protein YP_002897663.1 2899208 D 536230 CDS YP_002897664.1 237813213 7887980 2899852..2900574 1 NC_012695.1 identified by match to protein family HMM PF00590; tetrapyrrole methylase family protein 2900574 7887980 GBP346_A2978 Burkholderia pseudomallei MSHR346 tetrapyrrole methylase family protein YP_002897664.1 2899852 D 536230 CDS YP_002897665.1 237813214 7887523 complement(2900613..2901530) 1 NC_012695.1 identified by match to protein family HMM PF01343; peptidase, U7 family protein 2901530 7887523 GBP346_A2979 Burkholderia pseudomallei MSHR346 peptidase, U7 family protein YP_002897665.1 2900613 R 536230 CDS YP_002897666.1 237813215 7886959 complement(2901624..2902019) 1 NC_012695.1 identified by match to protein family HMM PF00355; iron-sulfur cluster-binding protein, Rieske family 2902019 7886959 GBP346_A2980 Burkholderia pseudomallei MSHR346 iron-sulfur cluster-binding protein, Rieske family YP_002897666.1 2901624 R 536230 CDS YP_002897667.1 237813216 7886780 complement(2902016..2902675) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase 2902675 7886780 GBP346_A2981 Burkholderia pseudomallei MSHR346 HAD-superfamily hydrolase YP_002897667.1 2902016 R 536230 CDS YP_002897668.1 237813217 7887494 complement(2902681..2903688) 1 NC_012695.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; pseudouridine synthase, RluA family 2903688 7887494 GBP346_A2982 Burkholderia pseudomallei MSHR346 pseudouridine synthase, RluA family YP_002897668.1 2902681 R 536230 CDS YP_002897669.1 237813218 7888693 2904411..2907677 1 NC_012695.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease E 2907677 7888693 GBP346_A2983 Burkholderia pseudomallei MSHR346 ribonuclease E YP_002897669.1 2904411 D 536230 CDS YP_002897670.1 237813219 7889029 2907796..2908929 1 NC_012695.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2908929 moaA 7889029 moaA Burkholderia pseudomallei MSHR346 molybdenum cofactor biosynthesis protein A YP_002897670.1 2907796 D 536230 CDS YP_002897671.1 237813220 7887805 2908944..2909585 1 NC_012695.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2909585 mobA 7887805 mobA Burkholderia pseudomallei MSHR346 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002897671.1 2908944 D 536230 CDS YP_002897672.1 237813221 7888310 complement(2909537..2909713) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2909713 7888310 GBP346_A2985 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897672.1 2909537 R 536230 CDS YP_002897673.1 237813222 7890740 2909697..2910995 1 NC_012695.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 2910995 7890740 GBP346_A2987 Burkholderia pseudomallei MSHR346 molybdopterin biosynthesis protein MoeA YP_002897673.1 2909697 D 536230 CDS YP_002897674.1 237813223 7889674 2911032..2911319 1 NC_012695.1 hypothetical protein 2911319 7889674 GBP346_A2988 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897674.1 2911032 D 536230 CDS YP_002897675.1 237813224 7888630 2911316..2911819 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2911819 7888630 GBP346_A2989 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897675.1 2911316 D 536230 CDS YP_002897676.1 237813225 7887585 complement(2912054..2913529) 1 NC_012695.1 identified by match to protein family HMM PF02646; RmuC domain protein 2913529 7887585 GBP346_A2990 Burkholderia pseudomallei MSHR346 RmuC domain protein YP_002897676.1 2912054 R 536230 CDS YP_002897677.1 237813226 7887853 complement(2913526..2914584) 1 NC_012695.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; glyoxylate reductase (Glycolate reductase) 2914584 7887853 GBP346_A2991 Burkholderia pseudomallei MSHR346 glyoxylate reductase (Glycolate reductase) YP_002897677.1 2913526 R 536230 CDS YP_002897678.1 237813227 7887499 complement(2914581..2916089) 1 NC_012695.1 putative transporter 2916089 7887499 GBP346_A2992 Burkholderia pseudomallei MSHR346 putative transporter YP_002897678.1 2914581 R 536230 CDS YP_002897679.1 237813228 7886944 complement(2916079..2916741) 1 NC_012695.1 identified by match to protein family HMM PF02589; hypothetical protein 2916741 7886944 GBP346_A2993 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897679.1 2916079 R 536230 CDS YP_002897680.1 237813229 7888093 complement(2916886..2918085) 1 NC_012695.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2918085 pncB_2 7888093 pncB_2 Burkholderia pseudomallei MSHR346 nicotinate phosphoribosyltransferase YP_002897680.1 2916886 R 536230 CDS YP_002897681.1 237813230 7889306 2918170..2918436 1 NC_012695.1 hypothetical protein 2918436 7889306 GBP346_A2995 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897681.1 2918170 D 536230 CDS YP_002897682.1 237813231 7890288 2918354..2918677 1 NC_012695.1 identified by match to protein family HMM PF00037; ferredoxin 2918677 7890288 GBP346_A2996 Burkholderia pseudomallei MSHR346 ferredoxin YP_002897682.1 2918354 D 536230 CDS YP_002897683.1 237813232 7889167 2919165..2919644 1 NC_012695.1 identified by match to protein family HMM PF05981; CreA protein 2919644 7889167 GBP346_A2999 Burkholderia pseudomallei MSHR346 CreA protein YP_002897683.1 2919165 D 536230 CDS YP_002897684.1 237813233 7890068 2919840..2920001 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABA49716.1; hypothetical protein 2920001 7890068 GBP346_A3000 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897684.1 2919840 D 536230 CDS YP_002897685.1 237813234 7888695 2920064..2920966 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by similarity to GB:ABA49716.1; hypothetical protein 2920966 7888695 GBP346_A3001 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897685.1 2920064 D 536230 CDS YP_002897686.1 237813235 7888706 complement(2921151..2921657) 1 NC_012695.1 hypothetical protein 2921657 7888706 GBP346_A3002 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897686.1 2921151 R 536230 CDS YP_002897687.1 237813236 7887634 complement(2921714..2921875) 1 NC_012695.1 hypothetical protein 2921875 7887634 GBP346_A3003 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897687.1 2921714 R 536230 CDS YP_002897688.1 237813237 7890858 2921995..2922216 1 NC_012695.1 hypothetical protein 2922216 7890858 GBP346_A3004 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897688.1 2921995 D 536230 CDS YP_002897689.1 237813238 7887292 2922341..2923747 1 NC_012695.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug resistance protein NorM (Multidrug-efflux transporter) 2923747 7887292 GBP346_A3005 Burkholderia pseudomallei MSHR346 multidrug resistance protein NorM (Multidrug-efflux transporter) YP_002897689.1 2922341 D 536230 CDS YP_002897690.1 237813239 7887297 complement(2924189..2924362) 1 NC_012695.1 hypothetical protein 2924362 7887297 GBP346_A3006 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897690.1 2924189 R 536230 CDS YP_002897691.1 237813240 7889045 2924377..2925771 1 NC_012695.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2925771 fumC 7889045 fumC Burkholderia pseudomallei MSHR346 fumarate hydratase YP_002897691.1 2924377 D 536230 CDS YP_002897692.1 237813241 7887669 complement(2926258..2926764) 1 NC_012695.1 identified by match to protein family HMM PF03061; thioesterase family protein 2926764 7887669 GBP346_A3008 Burkholderia pseudomallei MSHR346 thioesterase family protein YP_002897692.1 2926258 R 536230 CDS YP_002897693.1 237813242 7886908 complement(2926946..2927086) 1 NC_012695.1 hypothetical protein 2927086 7886908 GBP346_A3009 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897693.1 2926946 R 536230 CDS YP_002897694.1 237813243 7887618 2927068..2927298 1 NC_012695.1 hypothetical protein 2927298 7887618 GBP346_A3010 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897694.1 2927068 D 536230 CDS YP_002897695.1 237813244 7887392 2927667..2928377 1 NC_012695.1 identified by match to protein family HMM PF01022; transcriptional regulator, ArsR family 2928377 7887392 GBP346_A3011 Burkholderia pseudomallei MSHR346 transcriptional regulator, ArsR family YP_002897695.1 2927667 D 536230 CDS YP_002897696.1 237813245 7888885 2928539..2931112 1 NC_012695.1 hypothetical protein 2931112 7888885 GBP346_A3012 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897696.1 2928539 D 536230 CDS YP_002897697.1 237813246 7887316 complement(2931202..2932173) 1 NC_012695.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2932173 thyA 7887316 thyA Burkholderia pseudomallei MSHR346 thymidylate synthase YP_002897697.1 2931202 R 536230 CDS YP_002897698.1 237813247 7886970 complement(2932230..2933615) 1 NC_012695.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator, Fis family 2933615 7886970 GBP346_A3014 Burkholderia pseudomallei MSHR346 sigma-54 dependent transcriptional regulator, Fis family YP_002897698.1 2932230 R 536230 CDS YP_002897699.1 237813248 7888269 2933577..2933873 1 NC_012695.1 hypothetical protein 2933873 7888269 GBP346_A3015 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897699.1 2933577 D 536230 CDS YP_002897700.1 237813249 7888178 complement(2934114..2934350) 1 NC_012695.1 hypothetical protein 2934350 7888178 GBP346_A3016 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897700.1 2934114 R 536230 CDS YP_002897701.1 237813250 7887684 2934357..2934506 1 NC_012695.1 hypothetical protein 2934506 7887684 GBP346_A3017 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897701.1 2934357 D 536230 CDS YP_002897702.1 237813251 7889290 2934663..2934848 1 NC_012695.1 hypothetical protein 2934848 7889290 GBP346_A3018 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897702.1 2934663 D 536230 CDS YP_002897703.1 237813252 7890290 complement(2935291..2935623) 1 NC_012695.1 hypothetical protein 2935623 7890290 GBP346_A3019 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897703.1 2935291 R 536230 CDS YP_002897704.1 237813253 7888947 complement(2935663..2936370) 1 NC_012695.1 hypothetical protein 2936370 7888947 GBP346_A3020 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897704.1 2935663 R 536230 CDS YP_002897705.1 237813254 7887671 2936435..2937895 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator, Fis family 2937895 7887671 GBP346_A3021 Burkholderia pseudomallei MSHR346 sigma-54 dependent transcriptional regulator, Fis family YP_002897705.1 2936435 D 536230 CDS YP_002897706.1 237813255 7888403 2938103..2938606 1 NC_012695.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 2938606 folA 7888403 folA Burkholderia pseudomallei MSHR346 dihydrofolate reductase YP_002897706.1 2938103 D 536230 CDS YP_002897707.1 237813256 7890614 complement(2938734..2940215) 1 NC_012695.1 identified by match to protein family HMM PF01609; ISBma2, transposase 2940215 7890614 GBP346_A3023 Burkholderia pseudomallei MSHR346 ISBma2, transposase YP_002897707.1 2938734 R 536230 CDS YP_002897708.1 237813257 7888589 complement(2940333..2941703) 1 NC_012695.1 identified by match to protein family HMM PF01523; TldD/PmbA family protein 2941703 7888589 GBP346_A3024 Burkholderia pseudomallei MSHR346 TldD/PmbA family protein YP_002897708.1 2940333 R 536230 CDS YP_002897709.1 237813258 7889972 complement(2941765..2941914) 1 NC_012695.1 hypothetical protein 2941914 7889972 GBP346_A3025 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897709.1 2941765 R 536230 CDS YP_002897710.1 237813259 7890280 2941849..2942457 1 NC_012695.1 identified by match to protein family HMM PF04751; hypothetical protein 2942457 7890280 GBP346_A3026 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897710.1 2941849 D 536230 CDS YP_002897711.1 237813260 7886843 2942474..2943058 1 NC_012695.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 2943058 mogA 7886843 mogA Burkholderia pseudomallei MSHR346 molybdenum cofactor biosynthesis protein MogA YP_002897711.1 2942474 D 536230 CDS YP_002897712.1 237813261 7890061 complement(2943340..2943945) 1 NC_012695.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 2943945 7890061 GBP346_A3028 Burkholderia pseudomallei MSHR346 oligoribonuclease YP_002897712.1 2943340 R 536230 CDS YP_002897713.1 237813262 7888705 2944064..2945323 1 NC_012695.1 identified by match to protein family HMM PF01435; peptidase, M48 family 2945323 7888705 GBP346_A3029 Burkholderia pseudomallei MSHR346 peptidase, M48 family YP_002897713.1 2944064 D 536230 CDS YP_002897714.1 237813263 7888670 2945320..2946264 1 NC_012695.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 2946264 rsgA 7888670 rsgA Burkholderia pseudomallei MSHR346 ribosome-associated GTPase YP_002897714.1 2945320 D 536230 CDS YP_002897715.1 237813264 7889043 2946333..2946650 1 NC_012695.1 putative lipoprotein 2946650 7889043 GBP346_A3031 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897715.1 2946333 D 536230 CDS YP_002897716.1 237813265 7889770 complement(2946817..2947806) 1 NC_012695.1 identified by match to protein family HMM PF03186; CobD/CbiB family protein 2947806 7889770 GBP346_A3032 Burkholderia pseudomallei MSHR346 CobD/CbiB family protein YP_002897716.1 2946817 R 536230 CDS YP_002897717.1 237813266 7888233 complement(2947856..2948806) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00293; pyrophosphatase, MutT/nudix family 2948806 7888233 GBP346_A3033 Burkholderia pseudomallei MSHR346 pyrophosphatase, MutT/nudix family YP_002897717.1 2947856 R 536230 CDS YP_002897718.1 237813267 7890565 2948819..2949025 1 NC_012695.1 hypothetical protein 2949025 7890565 GBP346_A3034 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897718.1 2948819 D 536230 CDS YP_002897719.1 237813268 7890700 2949482..2950072 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 2950072 7890700 GBP346_A3035 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897719.1 2949482 D 536230 CDS YP_002897720.1 237813269 7888825 complement(2950381..2950770) 1 NC_012695.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2950770 rplS 7888825 rplS Burkholderia pseudomallei MSHR346 50S ribosomal protein L19 YP_002897720.1 2950381 R 536230 CDS YP_002897721.1 237813270 7888940 complement(2950908..2951702) 1 NC_012695.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2951702 trmD 7888940 trmD Burkholderia pseudomallei MSHR346 tRNA (guanine-N(1)-)-methyltransferase YP_002897721.1 2950908 R 536230 CDS YP_002897722.1 237813271 7889041 complement(2951704..2952393) 1 NC_012695.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 2952393 rimM 7889041 rimM Burkholderia pseudomallei MSHR346 16S rRNA-processing protein RimM YP_002897722.1 2951704 R 536230 CDS YP_002897723.1 237813272 7888666 complement(2952438..2952692) 1 NC_012695.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2952692 rpsP 7888666 rpsP Burkholderia pseudomallei MSHR346 30S ribosomal protein S16 YP_002897723.1 2952438 R 536230 CDS YP_002897724.1 237813273 7887047 2952857..2954026 1 NC_012695.1 putative L-sorbosone dehydrogenase homolog 2954026 7887047 GBP346_A3040 Burkholderia pseudomallei MSHR346 putative L-sorbosone dehydrogenase homolog YP_002897724.1 2952857 D 536230 CDS YP_002897725.1 237813274 7887267 2954133..2954600 1 NC_012695.1 hypothetical protein 2954600 7887267 GBP346_A3042 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897725.1 2954133 D 536230 CDS YP_002897726.1 237813275 7889957 complement(2954594..2955790) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF04055; radical SAM domain protein 2955790 7889957 GBP346_A3041 Burkholderia pseudomallei MSHR346 radical SAM domain protein YP_002897726.1 2954594 R 536230 CDS YP_002897727.1 237813276 7888634 complement(2955899..2956387) 1 NC_012695.1 identified by match to protein family HMM PF01037; leucine-responsive regulatory protein 2956387 7888634 GBP346_A3043 Burkholderia pseudomallei MSHR346 leucine-responsive regulatory protein YP_002897727.1 2955899 R 536230 CDS YP_002897728.1 237813277 7888565 2956535..2957821 1 NC_012695.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2957821 7888565 GBP346_A3044 Burkholderia pseudomallei MSHR346 D-amino acid dehydrogenase small subunit YP_002897728.1 2956535 D 536230 CDS YP_002897729.1 237813278 7886747 complement(2957936..2959726) 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2959726 7886747 GBP346_A3045 Burkholderia pseudomallei MSHR346 acyl-CoA dehydrogenase YP_002897729.1 2957936 R 536230 CDS YP_002897730.1 237813279 7889583 complement(2959840..2960775) 1 NC_012695.1 identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha (alpha-etf) (electrontransfer flavoprotein large subunit) (etfls) 2960775 7889583 GBP346_A3046 Burkholderia pseudomallei MSHR346 electron transfer flavoprotein subunit alpha (alpha-etf) (electrontransfer flavoprotein large subunit) (etfls) YP_002897730.1 2959840 R 536230 CDS YP_002897731.1 237813280 7890203 complement(2960791..2961546) 1 NC_012695.1 identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta (beta-etf) (electrontransfer flavoprotein small subunit) (etfss) 2961546 7890203 GBP346_A3047 Burkholderia pseudomallei MSHR346 electron transfer flavoprotein subunit beta (beta-etf) (electrontransfer flavoprotein small subunit) (etfss) YP_002897731.1 2960791 R 536230 CDS YP_002897732.1 237813281 7887808 complement(2961767..2962552) 1 NC_012695.1 identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; D-methionine ABC transporter, periplasmic D-methionine-binding protein 2962552 metQ 7887808 metQ Burkholderia pseudomallei MSHR346 D-methionine ABC transporter, periplasmic D-methionine-binding protein YP_002897732.1 2961767 R 536230 CDS YP_002897733.1 237813282 7889617 complement(2962641..2963294) 1 NC_012695.1 identified by match to protein family HMM PF00528; D-methionine transport system permease protein MetI 2963294 7889617 GBP346_A3049 Burkholderia pseudomallei MSHR346 D-methionine transport system permease protein MetI YP_002897733.1 2962641 R 536230 CDS YP_002897734.1 237813283 7888275 complement(2963284..2964318) 1 NC_012695.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 2964318 metN 7888275 metN Burkholderia pseudomallei MSHR346 DL-methionine transporter ATP-binding subunit YP_002897734.1 2963284 R 536230 CDS YP_002897735.1 237813284 7889822 2964626..2965468 1 NC_012695.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase family protein 2965468 7889822 GBP346_A3051 Burkholderia pseudomallei MSHR346 alpha/beta hydrolase family protein YP_002897735.1 2964626 D 536230 CDS YP_002897736.1 237813285 7887245 complement(2965811..2966734) 1 NC_012695.1 identified by match to protein family HMM PF00850; histone deacetylase family protein 2966734 7887245 GBP346_A3052 Burkholderia pseudomallei MSHR346 histone deacetylase family protein YP_002897736.1 2965811 R 536230 CDS YP_002897737.1 237813286 7889890 2966913..2968202 1 NC_012695.1 identified by match to protein family HMM TIGR02282; lytic murein transglycosylase B 2968202 mltB 7889890 mltB Burkholderia pseudomallei MSHR346 lytic murein transglycosylase B YP_002897737.1 2966913 D 536230 CDS YP_002897738.1 237813287 7890286 complement(2968429..2969340) 1 NC_012695.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 2969340 cysM 7890286 cysM Burkholderia pseudomallei MSHR346 cysteine synthase B YP_002897738.1 2968429 R 536230 CDS YP_002897739.1 237813288 7887400 complement(2969658..2969975) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; competence protein ComE 2969975 7887400 GBP346_A3055 Burkholderia pseudomallei MSHR346 competence protein ComE YP_002897739.1 2969658 R 536230 CDS YP_002897740.1 237813289 7887719 complement(2970047..2971039) 1 NC_012695.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197; ADP-glyceromanno-heptose 6-epimerase 2971039 rfaD 7887719 rfaD Burkholderia pseudomallei MSHR346 ADP-glyceromanno-heptose 6-epimerase YP_002897740.1 2970047 R 536230 CDS YP_002897741.1 237813290 7890618 complement(2971098..2972084) 1 NC_012695.1 identified by match to protein family HMM PF00294; match to protein family HMM TIGR02198; bifunctional protein RfaE, domain I 2972084 rfaE_2 7890618 rfaE_2 Burkholderia pseudomallei MSHR346 bifunctional protein RfaE, domain I YP_002897741.1 2971098 R 536230 CDS YP_002897742.1 237813291 7887935 complement(2972053..2973453) 1 NC_012695.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 2973453 7887935 GBP346_A3058 Burkholderia pseudomallei MSHR346 UDP-glucose 6-dehydrogenase YP_002897742.1 2972053 R 536230 CDS YP_002897743.1 237813292 7890936 complement(2973574..2974743) 1 NC_012695.1 identified by match to protein family HMM PF00515; tetratricopeptide repeat protein 2974743 7890936 GBP346_A3059 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002897743.1 2973574 R 536230 CDS YP_002897744.1 237813293 7886841 complement(2974796..2975317) 1 NC_012695.1 hypothetical protein 2975317 7886841 GBP346_A3060 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897744.1 2974796 R 536230 CDS YP_002897745.1 237813294 7890296 complement(2975314..2975637) 1 NC_012695.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2975637 ihfB 7890296 ihfB Burkholderia pseudomallei MSHR346 integration host factor subunit beta YP_002897745.1 2975314 R 536230 CDS YP_002897746.1 237813295 7888091 complement(2975660..2977372) 1 NC_012695.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2977372 rpsA 7888091 rpsA Burkholderia pseudomallei MSHR346 30S ribosomal protein S1 YP_002897746.1 2975660 R 536230 CDS YP_002897747.1 237813296 7887144 complement(2977517..2978203) 1 NC_012695.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2978203 cmk 7887144 cmk Burkholderia pseudomallei MSHR346 cytidylate kinase YP_002897747.1 2977517 R 536230 CDS YP_002897748.1 237813297 7889417 complement(2978224..2980473) 1 NC_012695.1 fusion of tyrA/aroA; bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase 2980473 aroA 7889417 aroA Burkholderia pseudomallei MSHR346 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase YP_002897748.1 2978224 R 536230 CDS YP_002897749.1 237813298 7889360 complement(2980712..2981794) 1 NC_012695.1 identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807; chorismate mutase/prephenate dehydratase 2981794 pheA 7889360 pheA Burkholderia pseudomallei MSHR346 chorismate mutase/prephenate dehydratase YP_002897749.1 2980712 R 536230 CDS YP_002897750.1 237813299 7890564 complement(2981829..2983007) 1 NC_012695.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2983007 serC 7890564 serC Burkholderia pseudomallei MSHR346 phosphoserine aminotransferase YP_002897750.1 2981829 R 536230 CDS YP_002897751.1 237813300 7887102 complement(2983085..2983681) 1 NC_012695.1 hypothetical protein 2983681 7887102 GBP346_A3067 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897751.1 2983085 R 536230 CDS YP_002897752.1 237813301 7889402 complement(2983782..2986448) 1 NC_012695.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 2986448 gyrA 7889402 gyrA Burkholderia pseudomallei MSHR346 DNA gyrase subunit A YP_002897752.1 2983782 R 536230 CDS YP_002897753.1 237813302 7890137 2986374..2986502 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2986502 7890137 GBP346_A3069 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897753.1 2986374 D 536230 CDS YP_002897754.1 237813303 7887049 2986892..2987566 1 NC_012695.1 identified by match to protein family HMM PF00691; OmpA family protein 2987566 7887049 GBP346_A3070 Burkholderia pseudomallei MSHR346 OmpA family protein YP_002897754.1 2986892 D 536230 CDS YP_002897755.1 237813304 7890941 2987690..2988433 1 NC_012695.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2988433 ubiG 7890941 ubiG Burkholderia pseudomallei MSHR346 3-demethylubiquinone-9 3-methyltransferase YP_002897755.1 2987690 D 536230 CDS YP_002897756.1 237813305 7887979 2988459..2989184 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 2989184 gph_1 7887979 gph_1 Burkholderia pseudomallei MSHR346 phosphoglycolate phosphatase YP_002897756.1 2988459 D 536230 CDS YP_002897757.1 237813306 7887080 2989759..2990997 1 NC_012695.1 identified by match to protein family HMM PF00589; integrase 2990997 7887080 GBP346_A3075 Burkholderia pseudomallei MSHR346 integrase YP_002897757.1 2989759 D 536230 CDS YP_002897758.1 237813307 7889282 2991049..2991219 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2991219 7889282 GBP346_A3076 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897758.1 2991049 D 536230 CDS YP_002897759.1 237813308 7887120 complement(2991850..2994699) 1 NC_012695.1 identified by match to protein family HMM PF08707; primase C 2 (PriCT-2) family 2994699 7887120 GBP346_A3077 Burkholderia pseudomallei MSHR346 primase C 2 (PriCT-2) family YP_002897759.1 2991850 R 536230 CDS YP_002897760.1 237813309 7887731 complement(2994811..2995065) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 2995065 7887731 GBP346_A3078 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897760.1 2994811 R 536230 CDS YP_002897761.1 237813310 7887631 complement(2995244..2995588) 1 NC_012695.1 hypothetical protein 2995588 7887631 GBP346_A3079 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897761.1 2995244 R 536230 CDS YP_002897762.1 237813311 7890323 complement(2995585..2995842) 1 NC_012695.1 hypothetical protein 2995842 7890323 GBP346_A3080 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897762.1 2995585 R 536230 CDS YP_002897763.1 237813312 7887229 complement(2995835..2996011) 1 NC_012695.1 hypothetical protein 2996011 7887229 GBP346_A3081 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897763.1 2995835 R 536230 CDS YP_002897764.1 237813313 7890892 complement(2996373..2996642) 1 NC_012695.1 hypothetical protein 2996642 7890892 GBP346_A3082 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897764.1 2996373 R 536230 CDS YP_002897765.1 237813314 7890364 complement(2996642..2996905) 1 NC_012695.1 identified by match to protein family HMM PF05930; phage transcriptional regulator, AlpA 2996905 7890364 GBP346_A3083 Burkholderia pseudomallei MSHR346 phage transcriptional regulator, AlpA YP_002897765.1 2996642 R 536230 CDS YP_002897766.1 237813315 7889363 complement(2997008..2997673) 1 NC_012695.1 hypothetical protein 2997673 7889363 GBP346_A3084 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897766.1 2997008 R 536230 CDS YP_002897767.1 237813316 7887021 complement(2998211..2999785) 1 NC_012695.1 identified by match to protein family HMM PF03235; hypothetical protein 2999785 7887021 GBP346_A3085 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897767.1 2998211 R 536230 CDS YP_002897768.1 237813317 7888753 3000243..3000851 1 NC_012695.1 hypothetical protein 3000851 7888753 GBP346_A3086 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897768.1 3000243 D 536230 CDS YP_002897769.1 237813318 7887410 3000943..3001548 1 NC_012695.1 hypothetical protein 3001548 7887410 GBP346_A3087 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897769.1 3000943 D 536230 CDS YP_002897770.1 237813319 7886762 complement(3001617..3001733) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3001733 7886762 GBP346_A3088 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897770.1 3001617 R 536230 CDS YP_002897771.1 237813320 7890373 complement(3002041..3002187) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3002187 7890373 GBP346_A3089 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897771.1 3002041 R 536230 CDS YP_002897772.1 237813321 7890937 3002227..3002721 1 NC_012695.1 hypothetical protein 3002721 7890937 GBP346_A3090 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897772.1 3002227 D 536230 CDS YP_002897773.1 237813322 7890435 3002834..3002953 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3002953 7890435 GBP346_A3091 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897773.1 3002834 D 536230 CDS YP_002897774.1 237813323 7889431 complement(3003106..3003204) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3003204 7889431 GBP346_A3092 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897774.1 3003106 R 536230 CDS YP_002897775.1 237813324 7889350 3003145..3003720 1 NC_012695.1 identified by match to protein family HMM PF00239; match to protein family HMM PF02796; resolvase, N domain protein 3003720 7889350 GBP346_A3093 Burkholderia pseudomallei MSHR346 resolvase, N domain protein YP_002897775.1 3003145 D 536230 CDS YP_002897776.1 237813325 7890265 3004202..3004414 1 NC_012695.1 hypothetical protein 3004414 7890265 GBP346_A3094 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897776.1 3004202 D 536230 CDS YP_002897777.1 237813326 7886838 3004496..3005140 1 NC_012695.1 identified by match to protein family HMM PF08242; phospholipid N-methyltransferase PmtA 3005140 pmtA 7886838 pmtA Burkholderia pseudomallei MSHR346 phospholipid N-methyltransferase PmtA YP_002897777.1 3004496 D 536230 CDS YP_002897778.1 237813327 7890943 complement(3005321..3005584) 1 NC_012695.1 hypothetical protein 3005584 7890943 GBP346_A3096 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897778.1 3005321 R 536230 CDS YP_002897779.1 237813328 7889786 complement(3005686..3006765) 1 NC_012695.1 identified by match to protein family HMM PF00126; molybdate transport repressor domain protein 3006765 7889786 GBP346_A3097 Burkholderia pseudomallei MSHR346 molybdate transport repressor domain protein YP_002897779.1 3005686 R 536230 CDS YP_002897780.1 237813329 7887460 3006766..3006891 1 NC_012695.1 hypothetical protein 3006891 7887460 GBP346_A3098 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897780.1 3006766 D 536230 CDS YP_002897781.1 237813330 7888214 3006923..3007396 1 NC_012695.1 NAD-dependent formate dehydrogenase gamma subunit 3007396 7888214 GBP346_A3099 Burkholderia pseudomallei MSHR346 NAD-dependent formate dehydrogenase gamma subunit YP_002897781.1 3006923 D 536230 CDS YP_002897782.1 237813331 7890308 3007393..3008958 1 NC_012695.1 identified by match to protein family HMM PF01512; NAD-dependent formate dehydrogenase beta subunit 3008958 7890308 GBP346_A3100 Burkholderia pseudomallei MSHR346 NAD-dependent formate dehydrogenase beta subunit YP_002897782.1 3007393 D 536230 CDS YP_002897783.1 237813332 7888045 3008973..3011927 1 NC_012695.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591; formate dehydrogenase, alpha subunit 3011927 7888045 GBP346_A3101 Burkholderia pseudomallei MSHR346 formate dehydrogenase, alpha subunit YP_002897783.1 3008973 D 536230 CDS YP_002897784.1 237813333 7887521 3011935..3012195 1 NC_012695.1 formate dehydrogenase, delta subunit 3012195 7887521 GBP346_A3102 Burkholderia pseudomallei MSHR346 formate dehydrogenase, delta subunit YP_002897784.1 3011935 D 536230 CDS YP_002897785.1 237813334 7887454 complement(3012510..3014156) 1 NC_012695.1 identified by match to protein family HMM PF01494; FAD-dependent oxidoreductase 3014156 7887454 GBP346_A3103 Burkholderia pseudomallei MSHR346 FAD-dependent oxidoreductase YP_002897785.1 3012510 R 536230 CDS YP_002897786.1 237813335 7888655 3014310..3016154 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; tetratricopeptide repeat protein 3016154 7888655 GBP346_A3104 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002897786.1 3014310 D 536230 CDS YP_002897787.1 237813336 7888197 3016167..3016379 1 NC_012695.1 hypothetical protein 3016379 7888197 GBP346_A3105 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897787.1 3016167 D 536230 CDS YP_002897788.1 237813337 7887703 complement(3016543..3017895) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; citrate-proton symporter 3017895 7887703 GBP346_A3106 Burkholderia pseudomallei MSHR346 citrate-proton symporter YP_002897788.1 3016543 R 536230 CDS YP_002897789.1 237813338 7890727 complement(3018136..3018273) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3018273 7890727 GBP346_A3107 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897789.1 3018136 R 536230 CDS YP_002897790.1 237813339 7890793 complement(3018327..3019655) 1 NC_012695.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase, class I 3019655 7890793 GBP346_A3108 Burkholderia pseudomallei MSHR346 glutamine amidotransferase, class I YP_002897790.1 3018327 R 536230 CDS YP_002897791.1 237813340 7888975 3019654..3019797 1 NC_012695.1 hypothetical protein 3019797 7888975 GBP346_A3110 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897791.1 3019654 D 536230 CDS YP_002897792.1 237813341 7888134 complement(3019774..3019989) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3019989 7888134 GBP346_A3109 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897792.1 3019774 R 536230 CDS YP_002897793.1 237813342 7889858 3019945..3021636 1 NC_012695.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3021636 7889858 GBP346_A3111 Burkholderia pseudomallei MSHR346 amidase YP_002897793.1 3019945 D 536230 CDS YP_002897794.1 237813343 7886872 3021745..3022254 1 NC_012695.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3022254 7886872 GBP346_A3112 Burkholderia pseudomallei MSHR346 disulfide bond formation protein B YP_002897794.1 3021745 D 536230 CDS YP_002897795.1 237813344 7890448 complement(3022450..3022824) 1 NC_012695.1 hypothetical protein 3022824 7890448 GBP346_A3113 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897795.1 3022450 R 536230 CDS YP_002897796.1 237813345 7889797 3022795..3023817 1 NC_012695.1 identified by match to protein family HMM PF02625; match to protein family HMM TIGR02964; xanthine dehydrogenase accessory protein XdhC 3023817 xdhC 7889797 xdhC Burkholderia pseudomallei MSHR346 xanthine dehydrogenase accessory protein XdhC YP_002897796.1 3022795 D 536230 CDS YP_002897797.1 237813346 7887739 3023859..3024884 1 NC_012695.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 3024884 add 7887739 add Burkholderia pseudomallei MSHR346 adenosine deaminase YP_002897797.1 3023859 D 536230 CDS YP_002897798.1 237813347 7889511 3024910..3026358 1 NC_012695.1 identified by match to protein family HMM PF00860; xanthine/uracil permease family protein 3026358 7889511 GBP346_A3116 Burkholderia pseudomallei MSHR346 xanthine/uracil permease family protein YP_002897798.1 3024910 D 536230 CDS YP_002897799.1 237813348 7887467 3026384..3027694 1 NC_012695.1 Catalyzes the deamination of guanine; guanine deaminase 3027694 guaD 7887467 guaD Burkholderia pseudomallei MSHR346 guanine deaminase YP_002897799.1 3026384 D 536230 CDS YP_002897800.1 237813349 7888339 3027775..3028185 1 NC_012695.1 probable multidrug resistance 1 hypothetical protein 3028185 7888339 GBP346_A3119 Burkholderia pseudomallei MSHR346 probable multidrug resistance 1 hypothetical protein YP_002897800.1 3027775 D 536230 CDS YP_002897801.1 237813350 7886926 3028182..3028754 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01169; integral membrane protein 3028754 7886926 GBP346_A3120 Burkholderia pseudomallei MSHR346 integral membrane protein YP_002897801.1 3028182 D 536230 CDS YP_002897802.1 237813351 7887159 complement(3029088..3029801) 1 NC_012695.1 putative lipoprotein 3029801 7887159 GBP346_A3121 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897802.1 3029088 R 536230 CDS YP_002897803.1 237813352 7889133 complement(3029860..3029997) 1 NC_012695.1 hypothetical protein 3029997 7889133 GBP346_A3122 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897803.1 3029860 R 536230 CDS YP_002897804.1 237813353 7890408 3030022..3032724 1 NC_012695.1 identified by match to protein family HMM PF01433; match to protein family HMM TIGR02414; aminopeptidase N 3032724 pepN 7890408 pepN Burkholderia pseudomallei MSHR346 aminopeptidase N YP_002897804.1 3030022 D 536230 CDS YP_002897805.1 237813354 7887577 complement(3032822..3032962) 1 NC_012695.1 hypothetical protein 3032962 7887577 GBP346_A3124 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897805.1 3032822 R 536230 CDS YP_002897806.1 237813355 7890412 complement(3033062..3035356) 1 NC_012695.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 3035356 metE 7890412 metE Burkholderia pseudomallei MSHR346 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_002897806.1 3033062 R 536230 CDS YP_002897807.1 237813356 7890831 3035342..3035476 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3035476 7890831 GBP346_A3126 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897807.1 3035342 D 536230 CDS YP_002897808.1 237813357 7889423 3035473..3036405 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional activator MetR 3036405 metR 7889423 metR Burkholderia pseudomallei MSHR346 transcriptional activator MetR YP_002897808.1 3035473 D 536230 CDS YP_002897809.1 237813358 7889358 3036534..3037550 1 NC_012695.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3037550 fbp 7889358 fbp Burkholderia pseudomallei MSHR346 fructose-1,6-bisphosphatase YP_002897809.1 3036534 D 536230 CDS YP_002897810.1 237813359 7888102 3037724..3037879 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3037879 7888102 GBP346_A3129 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897810.1 3037724 D 536230 CDS YP_002897811.1 237813360 7889203 complement(3038034..3038216) 1 NC_012695.1 hypothetical protein 3038216 7889203 GBP346_A3131 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897811.1 3038034 R 536230 CDS YP_002897812.1 237813361 7888789 3038430..3038906 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3038906 7888789 GBP346_A3132 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897812.1 3038430 D 536230 CDS YP_002897813.1 237813362 7890230 3038995..3039141 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3039141 7890230 GBP346_A3133 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897813.1 3038995 D 536230 CDS YP_002897814.1 237813363 7887211 complement(3039162..3039377) 1 NC_012695.1 hypothetical protein 3039377 7887211 GBP346_A3134 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897814.1 3039162 R 536230 CDS YP_002897815.1 237813364 7889762 3040077..3040328 1 NC_012695.1 identified by match to protein family HMM PF04226; transglycosylase-associated protein 3040328 7889762 GBP346_A3135 Burkholderia pseudomallei MSHR346 transglycosylase-associated protein YP_002897815.1 3040077 D 536230 CDS YP_002897816.1 237813365 7889141 complement(3040615..3041112) 1 NC_012695.1 hypothetical protein 3041112 7889141 GBP346_A3136 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897816.1 3040615 R 536230 CDS YP_002897817.1 237813366 7888675 complement(3041109..3042359) 1 NC_012695.1 BNR/Asp-box repeat domain protein 3042359 7888675 GBP346_A3137 Burkholderia pseudomallei MSHR346 BNR/Asp-box repeat domain protein YP_002897817.1 3041109 R 536230 CDS YP_002897818.1 237813367 7889409 complement(3042368..3044704) 1 NC_012695.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 3044704 7889409 GBP346_A3138 Burkholderia pseudomallei MSHR346 TonB-dependent receptor YP_002897818.1 3042368 R 536230 CDS YP_002897819.1 237813368 7888341 3044696..3044836 1 NC_012695.1 hypothetical protein 3044836 7888341 GBP346_A3139 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897819.1 3044696 D 536230 CDS YP_002897820.1 237813369 7890520 complement(3044851..3045240) 1 NC_012695.1 hypothetical protein 3045240 7890520 GBP346_A3140 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897820.1 3044851 R 536230 CDS YP_002897821.1 237813370 7887236 3045446..3045592 1 NC_012695.1 hypothetical protein 3045592 7887236 GBP346_A3141 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897821.1 3045446 D 536230 CDS YP_002897822.1 237813371 7888561 3045877..3046446 1 NC_012695.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3046446 7888561 GBP346_A3143 Burkholderia pseudomallei MSHR346 chorismate mutase YP_002897822.1 3045877 D 536230 CDS YP_002897823.1 237813372 7890299 complement(3046443..3046601) 1 NC_012695.1 hypothetical protein 3046601 7890299 GBP346_A3142 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897823.1 3046443 R 536230 CDS YP_002897824.1 237813373 7887478 complement(3046755..3047900) 1 NC_012695.1 identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573; exonuclease, DNA polymerase III, epsilon subunit family/GIY-YIG catalytic domain protein 3047900 7887478 GBP346_A3144 Burkholderia pseudomallei MSHR346 exonuclease, DNA polymerase III, epsilon subunit family/GIY-YIG catalytic domain protein YP_002897824.1 3046755 R 536230 CDS YP_002897825.1 237813374 7887965 complement(3048046..3048249) 1 NC_012695.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein 3048249 7887965 GBP346_A3145 Burkholderia pseudomallei MSHR346 cold-shock DNA-binding domain protein YP_002897825.1 3048046 R 536230 CDS YP_002897826.1 237813375 7890020 3048652..3048915 1 NC_012695.1 hypothetical protein 3048915 7890020 GBP346_A3146 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897826.1 3048652 D 536230 CDS YP_002897827.1 237813376 7889648 3049431..3050570 1 NC_012695.1 identified by match to protein family HMM PF00267; putative outer membrane porin 3050570 7889648 GBP346_A3147 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002897827.1 3049431 D 536230 CDS YP_002897828.1 237813377 7889937 complement(3050798..3051361) 1 NC_012695.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 3051361 greB 7889937 greB Burkholderia pseudomallei MSHR346 transcription elongation factor GreB YP_002897828.1 3050798 R 536230 CDS YP_002897829.1 237813378 7889186 complement(3051899..3054268) 1 NC_012695.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase) 3054268 7889186 GBP346_A3151 Burkholderia pseudomallei MSHR346 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase) YP_002897829.1 3051899 R 536230 CDS YP_002897830.1 237813379 7889014 complement(3054335..3054538) 1 NC_012695.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3054538 rpoZ 7889014 rpoZ Burkholderia pseudomallei MSHR346 DNA-directed RNA polymerase subunit omega YP_002897830.1 3054335 R 536230 CDS YP_002897831.1 237813380 7890552 complement(3054599..3055282) 1 NC_012695.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3055282 gmk 7890552 gmk Burkholderia pseudomallei MSHR346 guanylate kinase YP_002897831.1 3054599 R 536230 CDS YP_002897832.1 237813381 7888164 complement(3055289..3056212) 1 NC_012695.1 identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein 3056212 7888164 GBP346_A3154 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897832.1 3055289 R 536230 CDS YP_002897833.1 237813382 7888399 3056384..3057115 1 NC_012695.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3057115 rph 7888399 rph Burkholderia pseudomallei MSHR346 ribonuclease PH YP_002897833.1 3056384 D 536230 CDS YP_002897834.1 237813383 7889620 3057112..3057744 1 NC_012695.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3057744 rdgB 7889620 rdgB Burkholderia pseudomallei MSHR346 putative deoxyribonucleotide triphosphate pyrophosphatase YP_002897834.1 3057112 D 536230 CDS YP_002897835.1 237813384 7888859 3057741..3058958 1 NC_012695.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3058958 7888859 GBP346_A3157 Burkholderia pseudomallei MSHR346 coproporphyrinogen III oxidase YP_002897835.1 3057741 D 536230 CDS YP_002897836.1 237813385 7889204 3059399..3059623 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3059623 7889204 GBP346_A3159 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897836.1 3059399 D 536230 CDS YP_002897837.1 237813386 7887158 3059683..3059892 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; site-specific recombinase, phage integrase family 3059892 7887158 GBP346_A3160 Burkholderia pseudomallei MSHR346 site-specific recombinase, phage integrase family YP_002897837.1 3059683 D 536230 CDS YP_002897838.1 237813387 7889764 3060036..3060152 1 NC_012695.1 hypothetical protein 3060152 7889764 GBP346_A3161 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897838.1 3060036 D 536230 CDS YP_002897839.1 237813388 7888995 complement(3060166..3060477) 1 NC_012695.1 transcriptional regulator, XRE family 3060477 7888995 GBP346_A3162 Burkholderia pseudomallei MSHR346 transcriptional regulator, XRE family YP_002897839.1 3060166 R 536230 CDS YP_002897840.1 237813389 7888586 3060918..3061412 1 NC_012695.1 identified by match to protein family HMM TIGR01352; TonB domain protein 3061412 7888586 GBP346_A3163 Burkholderia pseudomallei MSHR346 TonB domain protein YP_002897840.1 3060918 D 536230 CDS YP_002897841.1 237813390 7887232 complement(3061544..3061741) 1 NC_012695.1 hypothetical protein 3061741 7887232 GBP346_A3164 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897841.1 3061544 R 536230 CDS YP_002897842.1 237813391 7889283 3061841..3063154 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; MFS transporter, metabolite:H+ symporter (MHS) family protein 3063154 7889283 GBP346_A3165 Burkholderia pseudomallei MSHR346 MFS transporter, metabolite:H+ symporter (MHS) family protein YP_002897842.1 3061841 D 536230 CDS YP_002897843.1 237813392 7890294 3063335..3063517 1 NC_012695.1 hypothetical protein 3063517 7890294 GBP346_A3166 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897843.1 3063335 D 536230 CDS YP_002897844.1 237813393 7888929 complement(3063552..3064574) 1 NC_012695.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I 3064574 rfaC_1 7888929 rfaC_1 Burkholderia pseudomallei MSHR346 lipopolysaccharide heptosyltransferase I YP_002897844.1 3063552 R 536230 CDS YP_002897845.1 237813394 7887712 3064736..3066382 1 NC_012695.1 identified by match to protein family HMM PF00654; chloride transporter, ClC family 3066382 7887712 GBP346_A3168 Burkholderia pseudomallei MSHR346 chloride transporter, ClC family YP_002897845.1 3064736 D 536230 CDS YP_002897846.1 237813395 7887895 complement(3066499..3066918) 1 NC_012695.1 hypothetical protein 3066918 7887895 GBP346_A3169 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897846.1 3066499 R 536230 CDS YP_002897847.1 237813396 7887626 complement(3067040..3067294) 1 NC_012695.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3067294 minE 7887626 minE Burkholderia pseudomallei MSHR346 cell division topological specificity factor MinE YP_002897847.1 3067040 R 536230 CDS YP_002897848.1 237813397 7887469 complement(3067307..3068122) 1 NC_012695.1 identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD 3068122 minD 7887469 minD Burkholderia pseudomallei MSHR346 septum site-determining protein MinD YP_002897848.1 3067307 R 536230 CDS YP_002897849.1 237813398 7890506 complement(3068181..3068993) 1 NC_012695.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 3068993 minC 7890506 minC Burkholderia pseudomallei MSHR346 septum formation inhibitor YP_002897849.1 3068181 R 536230 CDS YP_002897850.1 237813399 7890014 complement(3069147..3069644) 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 3069644 7890014 GBP346_A3173 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897850.1 3069147 R 536230 CDS YP_002897851.1 237813400 7888994 3069711..3070403 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3070403 7888994 GBP346_A3174 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897851.1 3069711 D 536230 CDS YP_002897852.1 237813401 7888651 3070636..3070908 1 NC_012695.1 hypothetical protein 3070908 7888651 GBP346_A3175 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897852.1 3070636 D 536230 CDS YP_002897853.1 237813402 7889183 complement(3071338..3072639) 1 NC_012695.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3072639 serS 7889183 serS Burkholderia pseudomallei MSHR346 seryl-tRNA synthetase YP_002897853.1 3071338 R 536230 CDS YP_002897854.1 237813403 7888545 3072752..3073063 1 NC_012695.1 hypothetical protein 3073063 7888545 GBP346_A3178 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897854.1 3072752 D 536230 CDS YP_002897855.1 237813404 7886729 complement(3073103..3074413) 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF07728; recombination factor protein RarA 3074413 7886729 GBP346_A3179 Burkholderia pseudomallei MSHR346 recombination factor protein RarA YP_002897855.1 3073103 R 536230 CDS YP_002897856.1 237813405 7889653 complement(3074611..3075321) 1 NC_012695.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 3075321 lolA 7889653 lolA Burkholderia pseudomallei MSHR346 outer-membrane lipoprotein carrier protein YP_002897856.1 3074611 R 536230 CDS YP_002897857.1 237813406 7889973 complement(3075379..3077847) 1 NC_012695.1 identified by match to protein family HMM PF01580; match to protein family HMM PF09397; DNA translocase FtsK 3077847 7889973 GBP346_A3181 Burkholderia pseudomallei MSHR346 DNA translocase FtsK YP_002897857.1 3075379 R 536230 CDS YP_002897858.1 237813407 7888568 3078013..3078975 1 NC_012695.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 3078975 trxB 7888568 trxB Burkholderia pseudomallei MSHR346 thioredoxin-disulfide reductase YP_002897858.1 3078013 D 536230 CDS YP_002897859.1 237813408 7886759 3079143..3079880 1 NC_012695.1 identified by match to protein family HMM PF01713; Smr domain protein 3079880 7886759 GBP346_A3183 Burkholderia pseudomallei MSHR346 Smr domain protein YP_002897859.1 3079143 D 536230 CDS YP_002897860.1 237813409 7887278 3079906..3080526 1 NC_012695.1 identified by match to protein family HMM PF03458; YadS protein 3080526 7887278 GBP346_A3184 Burkholderia pseudomallei MSHR346 YadS protein YP_002897860.1 3079906 D 536230 CDS YP_002897861.1 237813410 7886721 complement(3080752..3081870) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein 3081870 7886721 GBP346_A3185 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein YP_002897861.1 3080752 R 536230 CDS YP_002897862.1 237813411 7887000 complement(3081971..3082828) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein 3082828 7887000 GBP346_A3186 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein YP_002897862.1 3081971 R 536230 CDS YP_002897863.1 237813412 7888145 complement(3082818..3083756) 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein 3083756 7888145 GBP346_A3187 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein YP_002897863.1 3082818 R 536230 CDS YP_002897864.1 237813413 7887510 complement(3083740..3083892) 1 NC_012695.1 hypothetical protein 3083892 7887510 GBP346_A3188 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897864.1 3083740 R 536230 CDS YP_002897865.1 237813414 7888037 complement(3083913..3085160) 1 NC_012695.1 identified by match to protein family HMM PF01547; ABC transporter, carbohydrate uptake transporter-1 3085160 7888037 GBP346_A3189 Burkholderia pseudomallei MSHR346 ABC transporter, carbohydrate uptake transporter-1 YP_002897865.1 3083913 R 536230 CDS YP_002897866.1 237813415 7889895 3085619..3087088 1 NC_012695.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3087088 zwf 7889895 zwf Burkholderia pseudomallei MSHR346 glucose-6-phosphate 1-dehydrogenase YP_002897866.1 3085619 D 536230 CDS YP_002897867.1 237813416 7889236 3087176..3087856 1 NC_012695.1 identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase 3087856 pgl 7889236 pgl Burkholderia pseudomallei MSHR346 6-phosphogluconolactonase YP_002897867.1 3087176 D 536230 CDS YP_002897868.1 237813417 7888663 3087834..3089759 1 NC_012695.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3089759 7888663 GBP346_A3192 Burkholderia pseudomallei MSHR346 bifunctional glucokinase/RpiR family transcriptional regulator YP_002897868.1 3087834 D 536230 CDS YP_002897869.1 237813418 7887495 3090068..3091030 1 NC_012695.1 identified by match to protein family HMM PF00497; polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein 3091030 7887495 GBP346_A3193 Burkholderia pseudomallei MSHR346 polar amino acid uptake abc transporter, paat family, periplasmic amino acid-binding protein YP_002897869.1 3090068 D 536230 CDS YP_002897870.1 237813419 7887078 3091116..3091775 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein 3091775 7887078 GBP346_A3194 Burkholderia pseudomallei MSHR346 amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease protein YP_002897870.1 3091116 D 536230 CDS YP_002897871.1 237813420 7889649 3091822..3092547 1 NC_012695.1 identified by match to protein family HMM PF00005; glutamate/aspartate ABC transporter, ATP-binding protein 3092547 gltL_1 7889649 gltL_1 Burkholderia pseudomallei MSHR346 glutamate/aspartate ABC transporter, ATP-binding protein YP_002897871.1 3091822 D 536230 CDS YP_002897872.1 237813421 7886741 3092619..3093638 1 NC_012695.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 3093638 7886741 GBP346_A3196 Burkholderia pseudomallei MSHR346 D-cysteine desulfhydrase YP_002897872.1 3092619 D 536230 CDS YP_002897873.1 237813422 7890893 3093635..3094102 1 NC_012695.1 hypothetical protein 3094102 7890893 GBP346_A3197 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897873.1 3093635 D 536230 CDS YP_002897874.1 237813423 7889977 complement(3094212..3095447) 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; drug resistance transporter, Bcr/CflA family 3095447 7889977 GBP346_A3198 Burkholderia pseudomallei MSHR346 drug resistance transporter, Bcr/CflA family YP_002897874.1 3094212 R 536230 CDS YP_002897875.1 237813424 7889654 3095657..3096154 1 NC_012695.1 hypothetical protein 3096154 7889654 GBP346_A3199 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897875.1 3095657 D 536230 CDS YP_002897876.1 237813425 7888092 3096259..3096717 1 NC_012695.1 hypothetical protein 3096717 7888092 GBP346_A3200 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897876.1 3096259 D 536230 CDS YP_002897877.1 237813426 7890024 3096736..3098436 1 NC_012695.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3098436 hemL 7890024 hemL Burkholderia pseudomallei MSHR346 glutamate-1-semialdehyde aminotransferase YP_002897877.1 3096736 D 536230 CDS YP_002897878.1 237813427 7886794 3098465..3099601 1 NC_012695.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 3099601 ribD_1 7886794 ribD_1 Burkholderia pseudomallei MSHR346 riboflavin biosynthesis protein RibD YP_002897878.1 3098465 D 536230 CDS YP_002897879.1 237813428 7889092 3099616..3100230 1 NC_012695.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3100230 ribE 7889092 ribE Burkholderia pseudomallei MSHR346 riboflavin synthase subunit alpha YP_002897879.1 3099616 D 536230 CDS YP_002897880.1 237813429 7889247 complement(3100336..3100464) 1 NC_012695.1 hypothetical protein 3100464 7889247 GBP346_A3204 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897880.1 3100336 R 536230 CDS YP_002897881.1 237813430 7889447 3100454..3100660 1 NC_012695.1 hypothetical protein 3100660 7889447 GBP346_A3205 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897881.1 3100454 D 536230 CDS YP_002897882.1 237813431 7888253 3100693..3101829 1 NC_012695.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3101829 ribBA 7888253 ribBA Burkholderia pseudomallei MSHR346 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein YP_002897882.1 3100693 D 536230 CDS YP_002897883.1 237813432 7890256 3101909..3102430 1 NC_012695.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3102430 ribH 7890256 ribH Burkholderia pseudomallei MSHR346 6,7-dimethyl-8-ribityllumazine synthase YP_002897883.1 3101909 D 536230 CDS YP_002897884.1 237813433 7887775 3102427..3102864 1 NC_012695.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3102864 nusB 7887775 nusB Burkholderia pseudomallei MSHR346 transcription antitermination protein NusB YP_002897884.1 3102427 D 536230 CDS YP_002897885.1 237813434 7890913 3102929..3104122 1 NC_012695.1 identified by match to protein family HMM PF00155; aminotransferase 3104122 7890913 GBP346_A3209 Burkholderia pseudomallei MSHR346 aminotransferase YP_002897885.1 3102929 D 536230 CDS YP_002897886.1 237813435 7890139 3104371..3104538 1 NC_012695.1 hypothetical protein 3104538 7890139 GBP346_A3210 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897886.1 3104371 D 536230 CDS YP_002897887.1 237813436 7890623 complement(3104707..3105819) 1 NC_012695.1 identified by match to protein family HMM PF01464; transglycosylase, SLT family 3105819 7890623 GBP346_A3211 Burkholderia pseudomallei MSHR346 transglycosylase, SLT family YP_002897887.1 3104707 R 536230 CDS YP_002897888.1 237813437 7890131 3106399..3107958 1 NC_012695.1 identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3107958 7890131 GBP346_A3212 Burkholderia pseudomallei MSHR346 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002897888.1 3106399 D 536230 CDS YP_002897889.1 237813438 7890041 3108020..3108673 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 3108673 7890041 GBP346_A3213 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002897889.1 3108020 D 536230 CDS YP_002897890.1 237813439 7886805 complement(3109155..3110138) 1 NC_012695.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 3110138 7886805 GBP346_A3214 Burkholderia pseudomallei MSHR346 serine/threonine dehydratase YP_002897890.1 3109155 R 536230 CDS YP_002897891.1 237813440 7888099 3110127..3110306 1 NC_012695.1 hypothetical protein 3110306 7888099 GBP346_A3216 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897891.1 3110127 D 536230 CDS YP_002897892.1 237813441 7890360 complement(3110300..3110593) 1 NC_012695.1 hypothetical protein 3110593 7890360 GBP346_A3215 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897892.1 3110300 R 536230 CDS YP_002897893.1 237813442 7889681 complement(3110590..3110934) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3110934 7889681 GBP346_A3217 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897893.1 3110590 R 536230 CDS YP_002897894.1 237813443 7888344 3111019..3112155 1 NC_012695.1 identified by match to protein family HMM PF03807; NADP oxidoreductase, coenzyme f420-dependent 3112155 7888344 GBP346_A3218 Burkholderia pseudomallei MSHR346 NADP oxidoreductase, coenzyme f420-dependent YP_002897894.1 3111019 D 536230 CDS YP_002897895.1 237813444 7889061 3112160..3112801 1 NC_012695.1 identified by match to protein family HMM PF02325; membrane protein, yggt family 3112801 7889061 GBP346_A3219 Burkholderia pseudomallei MSHR346 membrane protein, yggt family YP_002897895.1 3112160 D 536230 CDS YP_002897896.1 237813445 7889800 complement(3112825..3113181) 1 NC_012695.1 identified by match to protein family HMM PF02641; hypothetical protein 3113181 7889800 GBP346_A3220 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897896.1 3112825 R 536230 CDS YP_002897897.1 237813446 7888912 complement(3113205..3113591) 1 NC_012695.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3113591 crcB 7888912 crcB Burkholderia pseudomallei MSHR346 camphor resistance protein CrcB YP_002897897.1 3113205 R 536230 CDS YP_002897898.1 237813447 7887059 3113607..3113855 1 NC_012695.1 hypothetical protein 3113855 7887059 GBP346_A3223 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897898.1 3113607 D 536230 CDS YP_002897899.1 237813448 7886739 complement(3113845..3114033) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3114033 7886739 GBP346_A3222 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897899.1 3113845 R 536230 CDS YP_002897900.1 237813449 7887896 3114200..3115420 1 NC_012695.1 serine protease, subtilase family 3115420 7887896 GBP346_A3224 Burkholderia pseudomallei MSHR346 serine protease, subtilase family YP_002897900.1 3114200 D 536230 CDS YP_002897901.1 237813450 7888449 complement(3115688..3116416) 1 NC_012695.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyl transferase 3116416 7888449 GBP346_A3225 Burkholderia pseudomallei MSHR346 methyl transferase YP_002897901.1 3115688 R 536230 CDS YP_002897902.1 237813451 7889076 complement(3116542..3116676) 1 NC_012695.1 hypothetical protein 3116676 7889076 GBP346_A3226 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897902.1 3116542 R 536230 CDS YP_002897903.1 237813452 7887263 complement(3116654..3116767) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; NAD-dependent deacetylase 3116767 7887263 GBP346_A3227 Burkholderia pseudomallei MSHR346 NAD-dependent deacetylase YP_002897903.1 3116654 R 536230 CDS YP_002897904.1 237813453 7886827 complement(3116772..3117536) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02146; NAD-dependent deacetylase 3117536 7886827 GBP346_A3228 Burkholderia pseudomallei MSHR346 NAD-dependent deacetylase YP_002897904.1 3116772 R 536230 CDS YP_002897905.1 237813454 7890065 complement(3118241..3120292) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3120292 7890065 GBP346_A3229 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897905.1 3118241 R 536230 CDS YP_002897906.1 237813455 7887502 complement(3120386..3120682) 1 NC_012695.1 hypothetical protein 3120682 7887502 GBP346_A3230 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897906.1 3120386 R 536230 CDS YP_002897907.1 237813456 7890702 3121599..3122648 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; DNA repair ATPase 3122648 7890702 GBP346_A3231 Burkholderia pseudomallei MSHR346 DNA repair ATPase YP_002897907.1 3121599 D 536230 CDS YP_002897908.1 237813457 7890001 3123334..3123495 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3123495 7890001 GBP346_A3232 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897908.1 3123334 D 536230 CDS YP_002897909.1 237813458 7887290 complement(3123608..3124855) 1 NC_012695.1 identified by match to protein family HMM PF01381; match to protein family HMM PF06114; putative phage-related DNA-binding protein 3124855 7887290 GBP346_A3233 Burkholderia pseudomallei MSHR346 putative phage-related DNA-binding protein YP_002897909.1 3123608 R 536230 CDS YP_002897910.1 237813459 7889387 complement(3124794..3125141) 1 NC_012695.1 hypothetical protein 3125141 7889387 GBP346_A3234 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897910.1 3124794 R 536230 CDS YP_002897911.1 237813460 7889214 3125920..3126717 1 NC_012695.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3126717 trmB 7889214 trmB Burkholderia pseudomallei MSHR346 tRNA (guanine-N(7)-)-methyltransferase YP_002897911.1 3125920 D 536230 CDS YP_002897912.1 237813461 7889826 complement(3126869..3127699) 1 NC_012695.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 3127699 uppP 7889826 uppP Burkholderia pseudomallei MSHR346 undecaprenyl pyrophosphate phosphatase YP_002897912.1 3126869 R 536230 CDS YP_002897913.1 237813462 7886911 complement(3127776..3128357) 1 NC_012695.1 hypothetical protein 3128357 7886911 GBP346_A3238 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897913.1 3127776 R 536230 CDS YP_002897914.1 237813463 7887645 complement(3128354..3128683) 1 NC_012695.1 identified by match to protein family HMM PF03692; proteinase inhibitor 3128683 7887645 GBP346_A3239 Burkholderia pseudomallei MSHR346 proteinase inhibitor YP_002897914.1 3128354 R 536230 CDS YP_002897915.1 237813464 7887534 complement(3128709..3128828) 1 NC_012695.1 hypothetical protein 3128828 7887534 GBP346_A3240 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897915.1 3128709 R 536230 CDS YP_002897916.1 237813465 7890100 3128853..3130247 1 NC_012695.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3130247 hemN_2 7890100 hemN_2 Burkholderia pseudomallei MSHR346 coproporphyrinogen III oxidase YP_002897916.1 3128853 D 536230 CDS YP_002897917.1 237813466 7890022 3130329..3130586 1 NC_012695.1 hypothetical protein 3130586 7890022 GBP346_A3242 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897917.1 3130329 D 536230 CDS YP_002897918.1 237813467 7888189 3130694..3131347 1 NC_012695.1 identified by match to protein family HMM PF01135; match to protein family HMM PF05175; match to protein family HMM PF08241; protein-L-isoaspartate 3131347 7888189 GBP346_A3243 Burkholderia pseudomallei MSHR346 protein-L-isoaspartate YP_002897918.1 3130694 D 536230 CDS YP_002897919.1 237813468 7886936 3131356..3131685 1 NC_012695.1 identified by match to protein family HMM PF00581; rhodanese domain protein 3131685 7886936 GBP346_A3244 Burkholderia pseudomallei MSHR346 rhodanese domain protein YP_002897919.1 3131356 D 536230 CDS YP_002897920.1 237813469 7887428 complement(3131778..3133106) 1 NC_012695.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase 3133106 7887428 GBP346_A3245 Burkholderia pseudomallei MSHR346 omega amino acid--pyruvate transaminase YP_002897920.1 3131778 R 536230 CDS YP_002897921.1 237813470 7888668 complement(3133103..3133363) 1 NC_012695.1 hypothetical protein 3133363 7888668 GBP346_A3246 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897921.1 3133103 R 536230 CDS YP_002897922.1 237813471 7890546 3133412..3134767 1 NC_012695.1 identified by match to protein family HMM TIGR01409; match to protein family HMM TIGR03407; urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein 3134767 7890546 GBP346_A3247 Burkholderia pseudomallei MSHR346 urea/short-chain amide ABC transporter, periplasmic urea/short-chain amide-binding protein YP_002897922.1 3133412 D 536230 CDS YP_002897923.1 237813472 7888988 3134862..3136484 1 NC_012695.1 identified by match to protein family HMM PF02653; match to protein family HMM TIGR03409; branched-chain amino acid ABC transporter, permease protein 3136484 7888988 GBP346_A3248 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, permease protein YP_002897923.1 3134862 D 536230 CDS YP_002897924.1 237813473 7886981 3136486..3137688 1 NC_012695.1 identified by match to protein family HMM PF02653; match to protein family HMM TIGR01409; match to protein family HMM TIGR03408; urea ABC transporter, permease protein UrtC 3137688 urtC 7886981 urtC Burkholderia pseudomallei MSHR346 urea ABC transporter, permease protein UrtC YP_002897924.1 3136486 D 536230 CDS YP_002897925.1 237813474 7890643 3137685..3138548 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03411; urea ABC transporter, ATP-binding protein UrtD 3138548 urtD 7890643 urtD Burkholderia pseudomallei MSHR346 urea ABC transporter, ATP-binding protein UrtD YP_002897925.1 3137685 D 536230 CDS YP_002897926.1 237813475 7888015 3138553..3139245 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03410; urea ABC transporter, ATP-binding protein UrtE 3139245 urtE 7888015 urtE Burkholderia pseudomallei MSHR346 urea ABC transporter, ATP-binding protein UrtE YP_002897926.1 3138553 D 536230 CDS YP_002897927.1 237813476 7889144 3139520..3140395 1 NC_012695.1 identified by match to protein family HMM PF01774; urease accessory protein UreD 3140395 ureD 7889144 ureD Burkholderia pseudomallei MSHR346 urease accessory protein UreD YP_002897927.1 3139520 D 536230 CDS YP_002897928.1 237813477 7888637 3140444..3140557 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3140557 7888637 GBP346_A3253 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897928.1 3140444 D 536230 CDS YP_002897929.1 237813478 7886876 3140617..3140919 1 NC_012695.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3140919 ureA 7886876 ureA Burkholderia pseudomallei MSHR346 urease subunit gamma YP_002897929.1 3140617 D 536230 CDS YP_002897930.1 237813479 7887862 3141009..3141314 1 NC_012695.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3141314 ureB 7887862 ureB Burkholderia pseudomallei MSHR346 urease subunit beta YP_002897930.1 3141009 D 536230 CDS YP_002897931.1 237813480 7888133 3141379..3143085 1 NC_012695.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3143085 ureC 7888133 ureC Burkholderia pseudomallei MSHR346 urease subunit alpha YP_002897931.1 3141379 D 536230 CDS YP_002897932.1 237813481 7886764 3143103..3143738 1 NC_012695.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3143738 ureE 7886764 ureE Burkholderia pseudomallei MSHR346 urease accessory protein UreE YP_002897932.1 3143103 D 536230 CDS YP_002897933.1 237813482 7888566 3143695..3144405 1 NC_012695.1 identified by match to protein family HMM PF01730; urease accessory protein UreF 3144405 ureF 7888566 ureF Burkholderia pseudomallei MSHR346 urease accessory protein UreF YP_002897933.1 3143695 D 536230 CDS YP_002897934.1 237813483 7889975 3144436..3145086 1 NC_012695.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101; urease accessory protein UreG 3145086 ureG 7889975 ureG Burkholderia pseudomallei MSHR346 urease accessory protein UreG YP_002897934.1 3144436 D 536230 CDS YP_002897935.1 237813484 7888612 complement(3145311..3146696) 1 NC_012695.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 3146696 7888612 GBP346_A3260 Burkholderia pseudomallei MSHR346 3-deoxy-D-manno-octulosonic-acid transferase YP_002897935.1 3145311 R 536230 CDS YP_002897936.1 237813485 7890089 complement(3146734..3147618) 1 NC_012695.1 hypothetical protein 3147618 7890089 GBP346_A3261 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897936.1 3146734 R 536230 CDS YP_002897937.1 237813486 7889434 complement(3147634..3148629) 1 NC_012695.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I 3148629 rfaC_2 7889434 rfaC_2 Burkholderia pseudomallei MSHR346 lipopolysaccharide heptosyltransferase I YP_002897937.1 3147634 R 536230 CDS YP_002897938.1 237813487 7890703 complement(3148810..3150375) 1 NC_012695.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase/phosphoglucomutase (PMM /PGM) 3150375 7890703 GBP346_A3263 Burkholderia pseudomallei MSHR346 phosphomannomutase/phosphoglucomutase (PMM /PGM) YP_002897938.1 3148810 R 536230 CDS YP_002897939.1 237813488 7887072 3150388..3151722 1 NC_012695.1 identified by match to protein family HMM PF01943; hypothetical protein 3151722 7887072 GBP346_A3264 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897939.1 3150388 D 536230 CDS YP_002897940.1 237813489 7890915 3151719..3152555 1 NC_012695.1 identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family 3152555 7890915 GBP346_A3265 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 2 family YP_002897940.1 3151719 D 536230 CDS YP_002897941.1 237813490 7889605 3152584..3153741 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 3153741 7889605 GBP346_A3266 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002897941.1 3152584 D 536230 CDS YP_002897942.1 237813491 7890894 3153756..3154778 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 3154778 galE 7890894 galE Burkholderia pseudomallei MSHR346 UDP-glucose 4-epimerase YP_002897942.1 3153756 D 536230 CDS YP_002897943.1 237813492 7889587 3154806..3155912 1 NC_012695.1 identified by match to protein family HMM PF00953; glycosyl transferase family protein 3155912 7889587 GBP346_A3268 Burkholderia pseudomallei MSHR346 glycosyl transferase family protein YP_002897943.1 3154806 D 536230 CDS YP_002897944.1 237813493 7886905 complement(3155975..3156112) 1 NC_012695.1 hypothetical protein 3156112 7886905 GBP346_A3269 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897944.1 3155975 R 536230 CDS YP_002897945.1 237813494 7888740 complement(3156285..3158198) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02629; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; putative epimerase/dehydratase WbiI 3158198 7888740 GBP346_A3270 Burkholderia pseudomallei MSHR346 putative epimerase/dehydratase WbiI YP_002897945.1 3156285 R 536230 CDS YP_002897946.1 237813495 7887397 complement(3158205..3159215) 1 NC_012695.1 identified by match to protein family HMM PF00953; glycosyl transferase family protein 3159215 wbiH 7887397 wbiH Burkholderia pseudomallei MSHR346 glycosyl transferase family protein YP_002897946.1 3158205 R 536230 CDS YP_002897947.1 237813496 7889458 complement(3159233..3160198) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; putative epimerase/dehydratase WbiG 3160198 7889458 GBP346_A3272 Burkholderia pseudomallei MSHR346 putative epimerase/dehydratase WbiG YP_002897947.1 3159233 R 536230 CDS YP_002897948.1 237813497 7888802 complement(3160195..3160995) 1 NC_012695.1 identified by match to protein family HMM PF00535; glycosyl transferase, group 2 family 3160995 7888802 GBP346_A3273 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 2 family YP_002897948.1 3160195 R 536230 CDS YP_002897949.1 237813498 7889801 complement(3161100..3162941) 1 NC_012695.1 identified by match to protein family HMM PF00535; putative glycosyl transferase WbiE 3162941 7889801 GBP346_A3274 Burkholderia pseudomallei MSHR346 putative glycosyl transferase WbiE YP_002897949.1 3161100 R 536230 CDS YP_002897950.1 237813499 7888610 complement(3162993..3164717) 1 NC_012695.1 identified by match to protein family HMM PF00535; match to protein family HMM PF08242; putative glycosyl transferase WbiD 3164717 7888610 GBP346_A3275 Burkholderia pseudomallei MSHR346 putative glycosyl transferase WbiD YP_002897950.1 3162993 R 536230 CDS YP_002897951.1 237813500 7890593 complement(3164721..3165605) 1 NC_012695.1 glycosyltransferase 3165605 7890593 GBP346_A3276 Burkholderia pseudomallei MSHR346 glycosyltransferase YP_002897951.1 3164721 R 536230 CDS YP_002897952.1 237813501 7887797 complement(3165665..3166756) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein 3166756 7887797 GBP346_A3277 Burkholderia pseudomallei MSHR346 NAD dependent epimerase/dehydratase family protein YP_002897952.1 3165665 R 536230 CDS YP_002897953.1 237813502 7889481 complement(3166756..3167994) 1 NC_012695.1 identified by match to protein family HMM PF01757; acetyltransferase 3167994 7889481 GBP346_A3278 Burkholderia pseudomallei MSHR346 acetyltransferase YP_002897953.1 3166756 R 536230 CDS YP_002897954.1 237813503 7888257 complement(3167991..3169388) 1 NC_012695.1 identified by match to protein family HMM PF00005; polysaccharide ABC transporter, ATP-binding protein 3169388 7888257 GBP346_A3279 Burkholderia pseudomallei MSHR346 polysaccharide ABC transporter, ATP-binding protein YP_002897954.1 3167991 R 536230 CDS YP_002897955.1 237813504 7889775 complement(3169390..3170223) 1 NC_012695.1 identified by match to protein family HMM PF01061; ABC-2 type transport system integral membrane protein 3170223 7889775 GBP346_A3280 Burkholderia pseudomallei MSHR346 ABC-2 type transport system integral membrane protein YP_002897955.1 3169390 R 536230 CDS YP_002897956.1 237813505 7886867 complement(3170250..3171146) 1 NC_012695.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase 3171146 rfbD 7886867 rfbD Burkholderia pseudomallei MSHR346 dTDP-4-dehydrorhamnose reductase YP_002897956.1 3170250 R 536230 CDS YP_002897957.1 237813506 7889284 complement(3171143..3171694) 1 NC_012695.1 identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 3171694 rfbC 7889284 rfbC Burkholderia pseudomallei MSHR346 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002897957.1 3171143 R 536230 CDS YP_002897958.1 237813507 7887045 complement(3171679..3172572) 1 NC_012695.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 3172572 rfbA 7887045 rfbA Burkholderia pseudomallei MSHR346 glucose-1-phosphate thymidylyltransferase YP_002897958.1 3171679 R 536230 CDS YP_002897959.1 237813508 7888725 complement(3172584..3173645) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 3173645 rfbB 7888725 rfbB Burkholderia pseudomallei MSHR346 dTDP-glucose 4,6-dehydratase YP_002897959.1 3172584 R 536230 CDS YP_002897960.1 237813509 7887820 complement(3173886..3174029) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3174029 7887820 GBP346_A3285 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897960.1 3173886 R 536230 CDS YP_002897961.1 237813510 7887525 3174023..3174871 1 NC_012695.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 3174871 apaH 7887525 apaH Burkholderia pseudomallei MSHR346 diadenosine tetraphosphatase YP_002897961.1 3174023 D 536230 CDS YP_002897962.1 237813511 7887448 complement(3175001..3175870) 1 NC_012695.1 identified by match to protein family HMM PF01553; putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC 3175870 7887448 GBP346_A3287 Burkholderia pseudomallei MSHR346 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC YP_002897962.1 3175001 R 536230 CDS YP_002897963.1 237813512 7890418 complement(3175885..3177162) 1 NC_012695.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3177162 7890418 GBP346_A3288 Burkholderia pseudomallei MSHR346 dihydroorotase YP_002897963.1 3175885 R 536230 CDS YP_002897964.1 237813513 7887725 complement(3177254..3178339) 1 NC_012695.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3178339 pyrB 7887725 pyrB Burkholderia pseudomallei MSHR346 aspartate carbamoyltransferase catalytic subunit YP_002897964.1 3177254 R 536230 CDS YP_002897965.1 237813514 7888756 complement(3178366..3178884) 1 NC_012695.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 3178884 7888756 GBP346_A3290 Burkholderia pseudomallei MSHR346 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_002897965.1 3178366 R 536230 CDS YP_002897966.1 237813515 7887116 complement(3178871..3179311) 1 NC_012695.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3179311 7887116 GBP346_A3291 Burkholderia pseudomallei MSHR346 Holliday junction resolvase-like protein YP_002897966.1 3178871 R 536230 CDS YP_002897967.1 237813516 7889379 complement(3179308..3179886) 1 NC_012695.1 identified by match to protein family HMM PF02622; hypothetical protein 3179886 7889379 GBP346_A3292 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897967.1 3179308 R 536230 CDS YP_002897968.1 237813517 7886728 complement(3180092..3181342) 1 NC_012695.1 hypothetical protein 3181342 7886728 GBP346_A3293 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897968.1 3180092 R 536230 CDS YP_002897969.1 237813518 7889279 complement(3181519..3181689) 1 NC_012695.1 identified by match to protein family HMM PF00301; rubredoxin 3181689 7889279 GBP346_A3294 Burkholderia pseudomallei MSHR346 rubredoxin YP_002897969.1 3181519 R 536230 CDS YP_002897970.1 237813519 7889588 3181909..3182757 1 NC_012695.1 identified by match to protein family HMM PF08543; phosphomethylpyrimidine kinase type-1 3182757 7889588 GBP346_A3295 Burkholderia pseudomallei MSHR346 phosphomethylpyrimidine kinase type-1 YP_002897970.1 3181909 D 536230 CDS YP_002897971.1 237813520 7889223 complement(3183084..3184724) 1 NC_012695.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 3184724 groEL 7889223 groEL Burkholderia pseudomallei MSHR346 chaperonin GroEL YP_002897971.1 3183084 R 536230 CDS YP_002897972.1 237813521 7887252 complement(3184772..3185065) 1 NC_012695.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 3185065 groES 7887252 groES Burkholderia pseudomallei MSHR346 co-chaperonin GroES YP_002897972.1 3184772 R 536230 CDS YP_002897973.1 237813522 7886692 complement(3185305..3185421) 1 NC_012695.1 hypothetical protein 3185421 7886692 GBP346_A3298 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897973.1 3185305 R 536230 CDS YP_002897974.1 237813523 7888699 complement(3185655..3187814) 1 NC_012695.1 hypothetical protein 3187814 7888699 GBP346_A3299 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897974.1 3185655 R 536230 CDS YP_002897975.1 237813524 7889479 3187831..3188064 1 NC_012695.1 hypothetical protein 3188064 7889479 GBP346_A3301 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897975.1 3187831 D 536230 CDS YP_002897976.1 237813525 7889874 complement(3188038..3188202) 1 NC_012695.1 hypothetical protein 3188202 7889874 GBP346_A3300 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897976.1 3188038 R 536230 CDS YP_002897977.1 237813526 7888650 complement(3188405..3188521) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3188521 7888650 GBP346_A3302 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897977.1 3188405 R 536230 CDS YP_002897978.1 237813527 7887701 3188577..3188780 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3188780 7887701 GBP346_A3303 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897978.1 3188577 D 536230 CDS YP_002897979.1 237813528 7889904 complement(3188872..3189567) 1 NC_012695.1 identified by match to protein family HMM PF01638; transcriptional regulator family protein 3189567 7889904 GBP346_A3304 Burkholderia pseudomallei MSHR346 transcriptional regulator family protein YP_002897979.1 3188872 R 536230 CDS YP_002897980.1 237813529 7887086 3189554..3190561 1 NC_012695.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; oxidoreductase, zinc-binding dehydrogenase family 3190561 7887086 GBP346_A3305 Burkholderia pseudomallei MSHR346 oxidoreductase, zinc-binding dehydrogenase family YP_002897980.1 3189554 D 536230 CDS YP_002897981.1 237813530 7889323 complement(3190585..3191607) 1 NC_012695.1 hypothetical protein 3191607 7889323 GBP346_A3306 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897981.1 3190585 R 536230 CDS YP_002897982.1 237813531 7887728 3191628..3191894 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3191894 7887728 GBP346_A3307 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897982.1 3191628 D 536230 CDS YP_002897983.1 237813532 7890944 3191891..3192103 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3192103 7890944 GBP346_A3309 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897983.1 3191891 D 536230 CDS YP_002897984.1 237813533 7886767 complement(3192097..3192612) 1 NC_012695.1 hypothetical protein 3192612 7886767 GBP346_A3308 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897984.1 3192097 R 536230 CDS YP_002897985.1 237813534 7887646 complement(3192728..3193600) 1 NC_012695.1 identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 3193600 7887646 GBP346_A3310 Burkholderia pseudomallei MSHR346 outer membrane protein, OmpW family YP_002897985.1 3192728 R 536230 CDS YP_002897986.1 237813535 7888047 complement(3193630..3194883) 1 NC_012695.1 putative lipoprotein 3194883 7888047 GBP346_A3311 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002897986.1 3193630 R 536230 CDS YP_002897987.1 237813536 7887002 complement(3194943..3196541) 1 NC_012695.1 hypothetical protein 3196541 7887002 GBP346_A3312 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897987.1 3194943 R 536230 CDS YP_002897988.1 237813537 7886821 complement(3197076..3197204) 1 NC_012695.1 hypothetical protein 3197204 7886821 GBP346_A3313 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897988.1 3197076 R 536230 CDS YP_002897989.1 237813538 7886755 complement(3197278..3197724) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01638; match to protein family HMM PF03551; transcriptional regulator, PadR family 3197724 7886755 GBP346_A3314 Burkholderia pseudomallei MSHR346 transcriptional regulator, PadR family YP_002897989.1 3197278 R 536230 CDS YP_002897990.1 237813539 7887635 3198022..3199236 1 NC_012695.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3199236 7887635 GBP346_A3315 Burkholderia pseudomallei MSHR346 metallo-beta-lactamase family protein YP_002897990.1 3198022 D 536230 CDS YP_002897991.1 237813540 7887686 3199417..3200004 1 NC_012695.1 identified by match to protein family HMM PF01381; DNA-binding protein 3200004 7887686 GBP346_A3316 Burkholderia pseudomallei MSHR346 DNA-binding protein YP_002897991.1 3199417 D 536230 CDS YP_002897992.1 237813541 7890142 3200001..3200528 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 3200528 7890142 GBP346_A3317 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002897992.1 3200001 D 536230 CDS YP_002897993.1 237813542 7890117 3200878..3201501 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 3201501 7890117 GBP346_A3318 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002897993.1 3200878 D 536230 CDS YP_002897994.1 237813543 7886976 3201965..3203101 1 NC_012695.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase family protein 3203101 7886976 GBP346_A3319 Burkholderia pseudomallei MSHR346 glycerophosphoryl diester phosphodiesterase family protein YP_002897994.1 3201965 D 536230 CDS YP_002897995.1 237813544 7887169 3203231..3204673 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter 3204673 7887169 GBP346_A3320 Burkholderia pseudomallei MSHR346 drug resistance MFS transporter YP_002897995.1 3203231 D 536230 CDS YP_002897996.1 237813545 7888025 3204811..3205149 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3205149 7888025 GBP346_A3321 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897996.1 3204811 D 536230 CDS YP_002897997.1 237813546 7886704 3205162..3205956 1 NC_012695.1 identified by match to protein family HMM PF01925; hypothetical protein 3205956 7886704 GBP346_A3322 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897997.1 3205162 D 536230 CDS YP_002897998.1 237813547 7887257 complement(3206289..3208136) 1 NC_012695.1 identified by match to protein family HMM PF00450; serine-type carboxypeptidase family protein 3208136 7887257 GBP346_A3323 Burkholderia pseudomallei MSHR346 serine-type carboxypeptidase family protein YP_002897998.1 3206289 R 536230 CDS YP_002897999.1 237813548 7889769 complement(3208136..3208273) 1 NC_012695.1 hypothetical protein 3208273 7889769 GBP346_A3324 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002897999.1 3208136 R 536230 CDS YP_002898000.1 237813549 7888172 3208475..3208591 1 NC_012695.1 hypothetical protein 3208591 7888172 GBP346_A3325 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898000.1 3208475 D 536230 CDS YP_002898001.1 237813550 7888111 complement(3208742..3210964) 1 NC_012695.1 hypothetical protein 3210964 7888111 GBP346_A3326 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898001.1 3208742 R 536230 CDS YP_002898002.1 237813551 7888958 complement(3210961..3211329) 1 NC_012695.1 identified by match to protein family HMM PF04972; putative phospholipid-binding protein 3211329 7888958 GBP346_A3327 Burkholderia pseudomallei MSHR346 putative phospholipid-binding protein YP_002898002.1 3210961 R 536230 CDS YP_002898003.1 237813552 7888195 complement(3211586..3211705) 1 NC_012695.1 hypothetical protein 3211705 7888195 GBP346_A3328 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898003.1 3211586 R 536230 CDS YP_002898004.1 237813553 7890562 3211712..3213211 1 NC_012695.1 hypothetical protein 3213211 7890562 GBP346_A3329 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898004.1 3211712 D 536230 CDS YP_002898005.1 237813554 7890106 3213309..3213947 1 NC_012695.1 identified by match to protein family HMM PF01323; dsba oxidoreductase 3213947 7890106 GBP346_A3330 Burkholderia pseudomallei MSHR346 dsba oxidoreductase YP_002898005.1 3213309 D 536230 CDS YP_002898006.1 237813555 7887681 3214021..3214968 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3214968 7887681 GBP346_A3331 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898006.1 3214021 D 536230 CDS YP_002898007.1 237813556 7889689 complement(3215051..3216166) 1 NC_012695.1 identified by match to protein family HMM PF01032; iron chelate uptake ABC transporter, FeCT family, permease protein 3216166 7889689 GBP346_A3332 Burkholderia pseudomallei MSHR346 iron chelate uptake ABC transporter, FeCT family, permease protein YP_002898007.1 3215051 R 536230 CDS YP_002898008.1 237813557 7888273 complement(3216163..3217191) 1 NC_012695.1 identified by match to protein family HMM PF01497; putative iron chelate uptake ABC transporter, periplasmic solute-binding protein 3217191 7888273 GBP346_A3333 Burkholderia pseudomallei MSHR346 putative iron chelate uptake ABC transporter, periplasmic solute-binding protein YP_002898008.1 3216163 R 536230 CDS YP_002898009.1 237813558 7889812 complement(3217185..3217976) 1 NC_012695.1 identified by match to protein family HMM PF00005; iron chelate uptake ABC transporter, FeCT family, ATP-binding protein 3217976 7889812 GBP346_A3334 Burkholderia pseudomallei MSHR346 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein YP_002898009.1 3217185 R 536230 CDS YP_002898010.1 237813559 7886889 complement(3218018..3220306) 1 NC_012695.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783; TonB-dependent siderophore receptor 3220306 7886889 GBP346_A3335 Burkholderia pseudomallei MSHR346 TonB-dependent siderophore receptor YP_002898010.1 3218018 R 536230 CDS YP_002898011.1 237813560 7890680 3220289..3220441 1 NC_012695.1 hypothetical protein 3220441 7890680 GBP346_A3336 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898011.1 3220289 D 536230 CDS YP_002898012.1 237813561 7887358 complement(3220797..3221201) 1 NC_012695.1 hypothetical protein 3221201 7887358 GBP346_A3337 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898012.1 3220797 R 536230 CDS YP_002898013.1 237813562 7890705 complement(3221386..3222168) 1 NC_012695.1 identified by match to protein family HMM PF01547; ABC-type molybdate transport system, periplasmic component 3222168 7890705 GBP346_A3338 Burkholderia pseudomallei MSHR346 ABC-type molybdate transport system, periplasmic component YP_002898013.1 3221386 R 536230 CDS YP_002898014.1 237813563 7887386 complement(3222553..3224916) 1 NC_012695.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02965; xanthine dehydrogenase, molybdopterin binding subunit 3224916 xdhB 7887386 xdhB Burkholderia pseudomallei MSHR346 xanthine dehydrogenase, molybdopterin binding subunit YP_002898014.1 3222553 R 536230 CDS YP_002898015.1 237813564 7890236 complement(3224945..3226462) 1 NC_012695.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450; match to protein family HMM TIGR02963; xanthine dehydrogenase, small subunit 3226462 xdhA 7890236 xdhA Burkholderia pseudomallei MSHR346 xanthine dehydrogenase, small subunit YP_002898015.1 3224945 R 536230 CDS YP_002898016.1 237813565 7889521 3226543..3226659 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3226659 7889521 GBP346_A3341 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898016.1 3226543 D 536230 CDS YP_002898017.1 237813566 7890260 3226741..3227964 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator superfamily transporter 3227964 7890260 GBP346_A3342 Burkholderia pseudomallei MSHR346 major facilitator superfamily transporter YP_002898017.1 3226741 D 536230 CDS YP_002898018.1 237813567 7887984 complement(3228441..3229331) 1 NC_012695.1 identified by match to protein family HMM PF00892; hypothetical protein 3229331 7887984 GBP346_A3343 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898018.1 3228441 R 536230 CDS YP_002898019.1 237813568 7887814 3229473..3230420 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 3230420 7887814 GBP346_A3344 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002898019.1 3229473 D 536230 CDS YP_002898020.1 237813569 7887602 complement(3230445..3231659) 1 NC_012695.1 identified by match to protein family HMM PF00266; aminotransferase, class V 3231659 7887602 GBP346_A3345 Burkholderia pseudomallei MSHR346 aminotransferase, class V YP_002898020.1 3230445 R 536230 CDS YP_002898021.1 237813570 7887385 3231681..3231995 1 NC_012695.1 hypothetical protein 3231995 7887385 GBP346_A3346 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898021.1 3231681 D 536230 CDS YP_002898022.1 237813571 7887540 3232557..3233537 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3233537 7887540 GBP346_A3347 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898022.1 3232557 D 536230 CDS YP_002898023.1 237813572 7888020 3233584..3234588 1 NC_012695.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 3234588 7888020 GBP346_A3348 Burkholderia pseudomallei MSHR346 D-lactate dehydrogenase YP_002898023.1 3233584 D 536230 CDS YP_002898024.1 237813573 7890910 3235130..3235789 1 NC_012695.1 identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476; cob(II)yrinic acid a,c-diamide reductase 3235789 bluB 7890910 bluB Burkholderia pseudomallei MSHR346 cob(II)yrinic acid a,c-diamide reductase YP_002898024.1 3235130 D 536230 CDS YP_002898025.1 237813574 7887600 3235905..3237074 1 NC_012695.1 identified by match to protein family HMM PF07690; inner membrane transport protein YdhP 3237074 7887600 GBP346_A3350 Burkholderia pseudomallei MSHR346 inner membrane transport protein YdhP YP_002898025.1 3235905 D 536230 CDS YP_002898026.1 237813575 7890111 3237359..3238528 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 3238528 7890111 GBP346_A3351 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002898026.1 3237359 D 536230 CDS YP_002898027.1 237813576 7886724 complement(3238966..3240273) 1 NC_012695.1 identified by match to protein family HMM PF01557; match to protein family HMM PF09298; match to protein family HMM TIGR01266; fumarylacetoacetase 3240273 fahA 7886724 fahA Burkholderia pseudomallei MSHR346 fumarylacetoacetase YP_002898027.1 3238966 R 536230 CDS YP_002898028.1 237813577 7888897 complement(3240270..3241604) 1 NC_012695.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 3241604 hmgA 7888897 hmgA Burkholderia pseudomallei MSHR346 homogentisate 1,2-dioxygenase YP_002898028.1 3240270 R 536230 CDS YP_002898029.1 237813578 7887777 complement(3241623..3242978) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; 4-hydroxybenzoate transporter 3242978 pcaK_1 7887777 pcaK_1 Burkholderia pseudomallei MSHR346 4-hydroxybenzoate transporter YP_002898029.1 3241623 R 536230 CDS YP_002898030.1 237813579 7890846 complement(3242975..3243205) 1 NC_012695.1 hypothetical protein 3243205 7890846 GBP346_A3355 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898030.1 3242975 R 536230 CDS YP_002898031.1 237813580 7890195 complement(3243248..3244909) 1 NC_012695.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD-dependent oxidoreductase 3244909 7890195 GBP346_A3356 Burkholderia pseudomallei MSHR346 FAD-dependent oxidoreductase YP_002898031.1 3243248 R 536230 CDS YP_002898032.1 237813581 7887205 complement(3244929..3245885) 1 NC_012695.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 3245885 7887205 GBP346_A3357 Burkholderia pseudomallei MSHR346 metallo-beta-lactamase family protein YP_002898032.1 3244929 R 536230 CDS YP_002898033.1 237813582 7890167 complement(3245968..3246099) 1 NC_012695.1 hypothetical protein 3246099 7890167 GBP346_A3358 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898033.1 3245968 R 536230 CDS YP_002898034.1 237813583 7889474 3246142..3246948 1 NC_012695.1 identified by match to protein family HMM PF00563; cyclic diguanylate phosphodiesterase 3246948 7889474 GBP346_A3359 Burkholderia pseudomallei MSHR346 cyclic diguanylate phosphodiesterase YP_002898034.1 3246142 D 536230 CDS YP_002898035.1 237813584 7888680 3247035..3247391 1 NC_012695.1 hypothetical protein 3247391 7888680 GBP346_A3360 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898035.1 3247035 D 536230 CDS YP_002898036.1 237813585 7889832 complement(3247408..3247815) 1 NC_012695.1 identified by match to protein family HMM PF04828; glutathione-dependent formaldehyde-activating, GFA 3247815 7889832 GBP346_A3361 Burkholderia pseudomallei MSHR346 glutathione-dependent formaldehyde-activating, GFA YP_002898036.1 3247408 R 536230 CDS YP_002898037.1 237813586 7890745 complement(3248164..3248967) 1 NC_012695.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 3248967 7890745 GBP346_A3362 Burkholderia pseudomallei MSHR346 transcriptional regulator, IclR family YP_002898037.1 3248164 R 536230 CDS YP_002898038.1 237813587 7890742 3249032..3250219 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase, (GCD) 3250219 7890742 GBP346_A3363 Burkholderia pseudomallei MSHR346 glutaryl-CoA dehydrogenase, (GCD) YP_002898038.1 3249032 D 536230 CDS YP_002898039.1 237813588 7890683 complement(3250474..3251112) 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; peroxiredoxin PRX1 3251112 7890683 GBP346_A3364 Burkholderia pseudomallei MSHR346 peroxiredoxin PRX1 YP_002898039.1 3250474 R 536230 CDS YP_002898040.1 237813589 7890638 3251323..3251742 1 NC_012695.1 identified by match to protein family HMM PF05957; hypothetical protein 3251742 7890638 GBP346_A3365 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898040.1 3251323 D 536230 CDS YP_002898041.1 237813590 7888818 3251866..3252255 1 NC_012695.1 hypothetical protein 3252255 7888818 GBP346_A3366 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898041.1 3251866 D 536230 CDS YP_002898042.1 237813591 7888809 3252359..3252763 1 NC_012695.1 hypothetical protein 3252763 7888809 GBP346_A3367 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898042.1 3252359 D 536230 CDS YP_002898043.1 237813592 7887066 complement(3252868..3253269) 1 NC_012695.1 putative type IV pilus biogenesis protein 3253269 7887066 GBP346_A3368 Burkholderia pseudomallei MSHR346 putative type IV pilus biogenesis protein YP_002898043.1 3252868 R 536230 CDS YP_002898044.1 237813593 7890347 complement(3253340..3253897) 1 NC_012695.1 hypothetical protein 3253897 7890347 GBP346_A3369 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898044.1 3253340 R 536230 CDS YP_002898045.1 237813594 7889730 complement(3253936..3254721) 1 NC_012695.1 identified by match to protein family HMM TIGR02532; prepilin-type N- cleavage/methylation domain protein 3254721 7889730 GBP346_A3370 Burkholderia pseudomallei MSHR346 prepilin-type N- cleavage/methylation domain protein YP_002898045.1 3253936 R 536230 CDS YP_002898046.1 237813595 7890211 complement(3254718..3255095) 1 NC_012695.1 hypothetical protein 3255095 7890211 GBP346_A3371 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898046.1 3254718 R 536230 CDS YP_002898047.1 237813596 7889384 complement(3255125..3255685) 1 NC_012695.1 identified by match to protein family HMM TIGR02532; putative type IV pilus protein 3255685 7889384 GBP346_A3372 Burkholderia pseudomallei MSHR346 putative type IV pilus protein YP_002898047.1 3255125 R 536230 CDS YP_002898048.1 237813597 7890534 complement(3255871..3256350) 1 NC_012695.1 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR 3256350 nrdR 7890534 nrdR Burkholderia pseudomallei MSHR346 transcriptional regulator NrdR YP_002898048.1 3255871 R 536230 CDS YP_002898049.1 237813598 7890827 complement(3256357..3257604) 1 NC_012695.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3257604 glyA 7890827 glyA Burkholderia pseudomallei MSHR346 serine hydroxymethyltransferase YP_002898049.1 3256357 R 536230 CDS YP_002898050.1 237813599 7888831 3257587..3257880 1 NC_012695.1 hypothetical protein 3257880 7888831 GBP346_A3375 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898050.1 3257587 D 536230 CDS YP_002898051.1 237813600 7887038 3258054..3258800 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 3258800 7887038 GBP346_A3376 Burkholderia pseudomallei MSHR346 oxidoreductase, short chain dehydrogenase/reductase family YP_002898051.1 3258054 D 536230 CDS YP_002898052.1 237813601 7890906 3258897..3259391 1 NC_012695.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; match to protein family HMM TIGR02799; tol-pal system-associated acyl-CoA thioesterase 3259391 ybgC 7890906 ybgC Burkholderia pseudomallei MSHR346 tol-pal system-associated acyl-CoA thioesterase YP_002898052.1 3258897 D 536230 CDS YP_002898053.1 237813602 7887150 3259568..3260245 1 NC_012695.1 identified by match to protein family HMM PF01618; match to protein family HMM TIGR02796; protein TolQ 3260245 tolQ 7887150 tolQ Burkholderia pseudomallei MSHR346 protein TolQ YP_002898053.1 3259568 D 536230 CDS YP_002898054.1 237813603 7888462 3260256..3260705 1 NC_012695.1 identified by match to protein family HMM PF02472; match to protein family HMM TIGR02801; protein TolR 3260705 tolR 7888462 tolR Burkholderia pseudomallei MSHR346 protein TolR YP_002898054.1 3260256 D 536230 CDS YP_002898055.1 237813604 7887362 3260702..3261727 1 NC_012695.1 identified by match to protein family HMM PF06519; match to protein family HMM TIGR02794; protein TolA 3261727 tolA 7887362 tolA Burkholderia pseudomallei MSHR346 protein TolA YP_002898055.1 3260702 D 536230 CDS YP_002898056.1 237813605 7889508 3261833..3263125 1 NC_012695.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3263125 tolB 7889508 tolB Burkholderia pseudomallei MSHR346 translocation protein TolB YP_002898056.1 3261833 D 536230 CDS YP_002898057.1 237813606 7888820 3263143..3263655 1 NC_012695.1 identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; outer membrane lipoprotein 3263655 7888820 GBP346_A3382 Burkholderia pseudomallei MSHR346 outer membrane lipoprotein YP_002898057.1 3263143 D 536230 CDS YP_002898058.1 237813607 7887382 3263675..3264424 1 NC_012695.1 identified by match to protein family HMM TIGR02795; tol-pal system protein YbgF 3264424 7887382 GBP346_A3383 Burkholderia pseudomallei MSHR346 tol-pal system protein YbgF YP_002898058.1 3263675 D 536230 CDS YP_002898059.1 237813608 7889195 complement(3264938..3265060) 1 NC_012695.1 putative lipoprotein 3265060 7889195 GBP346_A3385 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898059.1 3264938 R 536230 CDS YP_002898060.1 237813609 7889896 complement(3265190..3265423) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 3265423 7889896 GBP346_A3386 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898060.1 3265190 R 536230 CDS YP_002898061.1 237813610 7889267 complement(3265685..3266014) 1 NC_012695.1 hypothetical protein 3266014 7889267 GBP346_A3387 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898061.1 3265685 R 536230 CDS YP_002898062.1 237813611 7890155 3266048..3267022 1 NC_012695.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 3267022 galU_2 7890155 galU_2 Burkholderia pseudomallei MSHR346 UTP-glucose-1-phosphate uridylyltransferase YP_002898062.1 3266048 D 536230 CDS YP_002898063.1 237813612 7890073 3267054..3267206 1 NC_012695.1 hypothetical protein 3267206 7890073 GBP346_A3389 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898063.1 3267054 D 536230 CDS YP_002898064.1 237813613 7889886 complement(3267277..3268212) 1 NC_012695.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; sugar isomerase, KpsF/GutQ family 3268212 7889886 GBP346_A3390 Burkholderia pseudomallei MSHR346 sugar isomerase, KpsF/GutQ family YP_002898064.1 3267277 R 536230 CDS YP_002898065.1 237813614 7886973 complement(3268315..3268866) 1 NC_012695.1 identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 3268866 7886973 GBP346_A3391 Burkholderia pseudomallei MSHR346 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family YP_002898065.1 3268315 R 536230 CDS YP_002898066.1 237813615 7887548 complement(3268863..3269708) 1 NC_012695.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3269708 kdsA_2 7887548 kdsA_2 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxyphosphooctonate aldolase YP_002898066.1 3268863 R 536230 CDS YP_002898067.1 237813616 7890651 complement(3269793..3270953) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 3270953 7890651 GBP346_A3393 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002898067.1 3269793 R 536230 CDS YP_002898068.1 237813617 7890318 complement(3270950..3271894) 1 NC_012695.1 hypothetical protein 3271894 7890318 GBP346_A3394 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898068.1 3270950 R 536230 CDS YP_002898069.1 237813618 7887220 complement(3271891..3272427) 1 NC_012695.1 identified by match to protein family HMM PF00132; serine O-acetyltransferase 3272427 7887220 GBP346_A3395 Burkholderia pseudomallei MSHR346 serine O-acetyltransferase YP_002898069.1 3271891 R 536230 CDS YP_002898070.1 237813619 7887860 complement(3272429..3273625) 1 NC_012695.1 identified by match to protein family HMM PF05159; capsule polysaccharide biosynthesis protein 3273625 7887860 GBP346_A3396 Burkholderia pseudomallei MSHR346 capsule polysaccharide biosynthesis protein YP_002898070.1 3272429 R 536230 CDS YP_002898071.1 237813620 7889558 complement(3273658..3274932) 1 NC_012695.1 identified by match to protein family HMM PF01943; hypothetical protein 3274932 7889558 GBP346_A3397 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898071.1 3273658 R 536230 CDS YP_002898072.1 237813621 7890285 complement(3274993..3277233) 1 NC_012695.1 identified by match to protein family HMM PF02706; match to protein family HMM TIGR01005; match to protein family HMM TIGR01007; exopolysaccharide transport protein family protein 3277233 7890285 GBP346_A3398 Burkholderia pseudomallei MSHR346 exopolysaccharide transport protein family protein YP_002898072.1 3274993 R 536230 CDS YP_002898073.1 237813622 7886818 complement(3277275..3277709) 1 NC_012695.1 identified by match to protein family HMM PF01451; protein tyrosine phosphatase 3277709 7886818 GBP346_A3399 Burkholderia pseudomallei MSHR346 protein tyrosine phosphatase YP_002898073.1 3277275 R 536230 CDS YP_002898074.1 237813623 7887983 complement(3277706..3278974) 1 NC_012695.1 identified by match to protein family HMM PF02563; polysaccharide biosynthesis/export protein 3278974 7887983 GBP346_A3400 Burkholderia pseudomallei MSHR346 polysaccharide biosynthesis/export protein YP_002898074.1 3277706 R 536230 CDS YP_002898075.1 237813624 7888881 complement(3278971..3280119) 1 NC_012695.1 identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025; sugar transferase family protein 3280119 7888881 GBP346_A3401 Burkholderia pseudomallei MSHR346 sugar transferase family protein YP_002898075.1 3278971 R 536230 CDS YP_002898076.1 237813625 7890877 3280111..3280278 1 NC_012695.1 hypothetical protein 3280278 7890877 GBP346_A3403 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898076.1 3280111 D 536230 CDS YP_002898077.1 237813626 7890380 complement(3280273..3281340) 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 3281340 7890380 GBP346_A3402 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002898077.1 3280273 R 536230 CDS YP_002898078.1 237813627 7890554 3281281..3281430 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3281430 7890554 GBP346_A3404 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898078.1 3281281 D 536230 CDS YP_002898079.1 237813628 7888494 3281601..3281825 1 NC_012695.1 hypothetical protein 3281825 7888494 GBP346_A3405 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898079.1 3281601 D 536230 CDS YP_002898080.1 237813629 7889962 complement(3281909..3282040) 1 NC_012695.1 hypothetical protein 3282040 7889962 GBP346_A3406 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898080.1 3281909 R 536230 CDS YP_002898081.1 237813630 7888537 3282108..3282680 1 NC_012695.1 identified by match to protein family HMM PF01569; membrane protein, PAP2 family 3282680 7888537 GBP346_A3407 Burkholderia pseudomallei MSHR346 membrane protein, PAP2 family YP_002898081.1 3282108 D 536230 CDS YP_002898082.1 237813631 7890611 3282877..3284235 1 NC_012695.1 hypothetical protein 3284235 7890611 GBP346_A3408 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898082.1 3282877 D 536230 CDS YP_002898083.1 237813632 7890148 3284277..3285449 1 NC_012695.1 identified by match to protein family HMM PF02012; BNR/Asp-box repeat protein 3285449 7890148 GBP346_A3410 Burkholderia pseudomallei MSHR346 BNR/Asp-box repeat protein YP_002898083.1 3284277 D 536230 CDS YP_002898084.1 237813633 7886806 complement(3285403..3285804) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3285804 7886806 GBP346_A3409 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898084.1 3285403 R 536230 CDS YP_002898085.1 237813634 7889083 complement(3285910..3286608) 1 NC_012695.1 putative acetyltransferase protein 3286608 7889083 GBP346_A3411 Burkholderia pseudomallei MSHR346 putative acetyltransferase protein YP_002898085.1 3285910 R 536230 CDS YP_002898086.1 237813635 7889397 complement(3286617..3287936) 1 NC_012695.1 identified by match to protein family HMM PF00155; putative 8-amino-7-oxononanoate synthase 3287936 7889397 GBP346_A3412 Burkholderia pseudomallei MSHR346 putative 8-amino-7-oxononanoate synthase YP_002898086.1 3286617 R 536230 CDS YP_002898087.1 237813636 7889432 complement(3288001..3288918) 1 NC_012695.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3288918 lpxC_1 7889432 lpxC_1 Burkholderia pseudomallei MSHR346 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002898087.1 3288001 R 536230 CDS YP_002898088.1 237813637 7888279 complement(3288915..3296549) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08242; match to protein family HMM PF08659; putative polyketide synthase, type I 3296549 7888279 GBP346_A3414 Burkholderia pseudomallei MSHR346 putative polyketide synthase, type I YP_002898088.1 3288915 R 536230 CDS YP_002898089.1 237813638 7890304 complement(3296552..3298084) 1 NC_012695.1 identified by match to protein family HMM PF00884; putative capsular polysaccharide biosynthesis protein WcbQ 3298084 7890304 GBP346_A3415 Burkholderia pseudomallei MSHR346 putative capsular polysaccharide biosynthesis protein WcbQ YP_002898089.1 3296552 R 536230 CDS YP_002898090.1 237813639 7889030 complement(3298086..3298874) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short-chain dehydrogenase/reductase family 3298874 7889030 GBP346_A3416 Burkholderia pseudomallei MSHR346 oxidoreductase, short-chain dehydrogenase/reductase family YP_002898090.1 3298086 R 536230 CDS YP_002898091.1 237813640 7888030 complement(3298871..3300160) 1 NC_012695.1 identified by match to protein family HMM PF05159; capsule polysaccharide biosynthesis protein 3300160 7888030 GBP346_A3417 Burkholderia pseudomallei MSHR346 capsule polysaccharide biosynthesis protein YP_002898091.1 3298871 R 536230 CDS YP_002898092.1 237813641 7887485 complement(3300340..3300909) 1 NC_012695.1 identified by match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; D,D-heptose 1,7-bisphosphate phosphatase 3300909 7887485 GBP346_A3418 Burkholderia pseudomallei MSHR346 D,D-heptose 1,7-bisphosphate phosphatase YP_002898092.1 3300340 R 536230 CDS YP_002898093.1 237813642 7890441 complement(3300906..3301598) 1 NC_012695.1 identified by match to protein family HMM PF00483; D-glycero-D-manno-heptose 1-phosphate guanosyltransferase 3301598 7890441 GBP346_A3419 Burkholderia pseudomallei MSHR346 D-glycero-D-manno-heptose 1-phosphate guanosyltransferase YP_002898093.1 3300906 R 536230 CDS YP_002898094.1 237813643 7889454 complement(3301600..3302178) 1 NC_012695.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 3302178 7889454 GBP346_A3420 Burkholderia pseudomallei MSHR346 phosphoheptose isomerase YP_002898094.1 3301600 R 536230 CDS YP_002898095.1 237813644 7889376 complement(3302175..3303215) 1 NC_012695.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544; D-glycero-D-manno-heptose 7-phosphate kinase 3303215 7889376 GBP346_A3421 Burkholderia pseudomallei MSHR346 D-glycero-D-manno-heptose 7-phosphate kinase YP_002898095.1 3302175 R 536230 CDS YP_002898096.1 237813645 7888678 complement(3303231..3304244) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; GDP-4-dehydro-6-deoxy-D-mannose reductase 3304244 7888678 GBP346_A3422 Burkholderia pseudomallei MSHR346 GDP-4-dehydro-6-deoxy-D-mannose reductase YP_002898096.1 3303231 R 536230 CDS YP_002898097.1 237813646 7887789 complement(3304254..3305096) 1 NC_012695.1 identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 3305096 7887789 GBP346_A3423 Burkholderia pseudomallei MSHR346 NAD-dependent epimerase/dehydratase family protein YP_002898097.1 3304254 R 536230 CDS YP_002898098.1 237813647 7889119 complement(3305093..3305755) 1 NC_012695.1 capsular polysaccharide biosynthesis protein 3305755 7889119 GBP346_A3424 Burkholderia pseudomallei MSHR346 capsular polysaccharide biosynthesis protein YP_002898098.1 3305093 R 536230 CDS YP_002898099.1 237813648 7889574 complement(3306046..3307842) 1 NC_012695.1 identified by match to protein family HMM PF00534; WcbH 3307842 7889574 GBP346_A3425 Burkholderia pseudomallei MSHR346 WcbH YP_002898099.1 3306046 R 536230 CDS YP_002898100.1 237813649 7886875 complement(3307839..3308690) 1 NC_012695.1 putative capsular polysaccharide biosynthesis protein 3308690 7886875 GBP346_A3426 Burkholderia pseudomallei MSHR346 putative capsular polysaccharide biosynthesis protein YP_002898100.1 3307839 R 536230 CDS YP_002898101.1 237813650 7890657 3308652..3308819 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3308819 7890657 GBP346_A3428 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898101.1 3308652 D 536230 CDS YP_002898102.1 237813651 7889715 complement(3308790..3310040) 1 NC_012695.1 WcbF 3310040 7889715 GBP346_A3427 Burkholderia pseudomallei MSHR346 WcbF YP_002898102.1 3308790 R 536230 CDS YP_002898103.1 237813652 7888917 complement(3310135..3311658) 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 3311658 7888917 GBP346_A3429 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 YP_002898103.1 3310135 R 536230 CDS YP_002898104.1 237813653 7888061 complement(3311691..3312347) 1 NC_012695.1 identified by match to protein family HMM PF00005; Wzt2 3312347 7888061 GBP346_A3430 Burkholderia pseudomallei MSHR346 Wzt2 YP_002898104.1 3311691 R 536230 CDS YP_002898105.1 237813654 7888054 complement(3312344..3313126) 1 NC_012695.1 identified by match to protein family HMM PF01061; capsular polysaccharide export inner-membrane protein 3313126 7888054 GBP346_A3431 Burkholderia pseudomallei MSHR346 capsular polysaccharide export inner-membrane protein YP_002898105.1 3312344 R 536230 CDS YP_002898106.1 237813655 7887447 complement(3313133..3314680) 1 NC_012695.1 capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 3314680 7887447 GBP346_A3432 Burkholderia pseudomallei MSHR346 capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family YP_002898106.1 3313133 R 536230 CDS YP_002898107.1 237813656 7887966 complement(3314762..3315925) 1 NC_012695.1 identified by match to protein family HMM PF02563; capsule polysaccharide export protein, BexD/CtrA/VexA family 3315925 7887966 GBP346_A3433 Burkholderia pseudomallei MSHR346 capsule polysaccharide export protein, BexD/CtrA/VexA family YP_002898107.1 3314762 R 536230 CDS YP_002898108.1 237813657 7886988 3316175..3317257 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 3317257 7886988 GBP346_A3434 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 YP_002898108.1 3316175 D 536230 CDS YP_002898109.1 237813658 7890662 complement(3317300..3317416) 1 NC_012695.1 hypothetical protein 3317416 7890662 GBP346_A3435 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898109.1 3317300 R 536230 CDS YP_002898110.1 237813659 7890577 3317537..3319273 1 NC_012695.1 identified by match to protein family HMM PF05159; WcbA 3319273 7890577 GBP346_A3436 Burkholderia pseudomallei MSHR346 WcbA YP_002898110.1 3317537 D 536230 CDS YP_002898111.1 237813660 7890531 3319672..3321099 1 NC_012695.1 identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3321099 7890531 GBP346_A3437 Burkholderia pseudomallei MSHR346 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002898111.1 3319672 D 536230 CDS YP_002898112.1 237813661 7886888 complement(3321237..3321368) 1 NC_012695.1 hypothetical protein 3321368 7886888 GBP346_A3438 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898112.1 3321237 R 536230 CDS YP_002898113.1 237813662 7890649 3321370..3322206 1 NC_012695.1 identified by match to protein family HMM PF00310; YafJ 3322206 7890649 GBP346_A3439 Burkholderia pseudomallei MSHR346 YafJ YP_002898113.1 3321370 D 536230 CDS YP_002898114.1 237813663 7890088 3322317..3323144 1 NC_012695.1 identified by match to protein family HMM PF00924; transporter, MscS family 3323144 7890088 GBP346_A3440 Burkholderia pseudomallei MSHR346 transporter, MscS family YP_002898114.1 3322317 D 536230 CDS YP_002898115.1 237813664 7890202 complement(3323265..3323381) 1 NC_012695.1 hypothetical protein 3323381 7890202 GBP346_A3441 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898115.1 3323265 R 536230 CDS YP_002898116.1 237813665 7887590 complement(3323465..3324145) 1 NC_012695.1 identified by match to protein family HMM PF09335; membrane protein, DedA family 3324145 7887590 GBP346_A3442 Burkholderia pseudomallei MSHR346 membrane protein, DedA family YP_002898116.1 3323465 R 536230 CDS YP_002898117.1 237813666 7887125 3324330..3326375 1 NC_012695.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3326375 mutL 7887125 mutL Burkholderia pseudomallei MSHR346 DNA mismatch repair protein YP_002898117.1 3324330 D 536230 CDS YP_002898118.1 237813667 7889857 3326372..3327346 1 NC_012695.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3327346 miaA 7889857 miaA Burkholderia pseudomallei MSHR346 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002898118.1 3326372 D 536230 CDS YP_002898119.1 237813668 7888882 complement(3327364..3327765) 1 NC_012695.1 identified by match to protein family HMM TIGR02246; hypothetical protein 3327765 7888882 GBP346_A3445 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898119.1 3327364 R 536230 CDS YP_002898120.1 237813669 7888461 complement(3328199..3329254) 1 NC_012695.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3329254 purM 7888461 purM Burkholderia pseudomallei MSHR346 phosphoribosylaminoimidazole synthetase YP_002898120.1 3328199 R 536230 CDS YP_002898121.1 237813670 7890848 3329253..3330278 1 NC_012695.1 identified by match to protein family HMM PF00308; match to protein family HMM TIGR03420; DnaA regulatory inactivator Hda 3330278 7890848 GBP346_A3447 Burkholderia pseudomallei MSHR346 DnaA regulatory inactivator Hda YP_002898121.1 3329253 D 536230 CDS YP_002898122.1 237813671 7888549 3330300..3330986 1 NC_012695.1 identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily subfamily IB hydrolase 3330986 7888549 GBP346_A3448 Burkholderia pseudomallei MSHR346 HAD-superfamily subfamily IB hydrolase YP_002898122.1 3330300 D 536230 CDS YP_002898123.1 237813672 7887724 3330983..3332530 1 NC_012695.1 identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942; poly(A) polymerase (PAP) (Plasmid copy number protein) 3332530 7887724 GBP346_A3449 Burkholderia pseudomallei MSHR346 poly(A) polymerase (PAP) (Plasmid copy number protein) YP_002898123.1 3330983 D 536230 CDS YP_002898124.1 237813673 7889310 3332567..3333094 1 NC_012695.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 3333094 folK 7889310 folK Burkholderia pseudomallei MSHR346 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase YP_002898124.1 3332567 D 536230 CDS YP_002898125.1 237813674 7888509 3333085..3333774 1 NC_012695.1 identified by match to protein family HMM PF01712; deoxynucleoside kinase family protein 3333774 7888509 GBP346_A3451 Burkholderia pseudomallei MSHR346 deoxynucleoside kinase family protein YP_002898125.1 3333085 D 536230 CDS YP_002898126.1 237813675 7887179 3333839..3334654 1 NC_012695.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3334654 panB 7887179 panB Burkholderia pseudomallei MSHR346 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002898126.1 3333839 D 536230 CDS YP_002898127.1 237813676 7887140 complement(3334830..3336836) 1 NC_012695.1 identified by match to protein family HMM PF00425; PabB 3336836 7887140 GBP346_A3453 Burkholderia pseudomallei MSHR346 PabB YP_002898127.1 3334830 R 536230 CDS YP_002898128.1 237813677 7890191 complement(3336870..3338000) 1 NC_012695.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 3338000 dnaJ 7890191 dnaJ Burkholderia pseudomallei MSHR346 chaperone protein DnaJ YP_002898128.1 3336870 R 536230 CDS YP_002898129.1 237813678 7887845 3338010..3338174 1 NC_012695.1 hypothetical protein 3338174 7887845 GBP346_A3455 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898129.1 3338010 D 536230 CDS YP_002898130.1 237813679 7889540 complement(3338267..3340219) 1 NC_012695.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3340219 dnaK 7889540 dnaK Burkholderia pseudomallei MSHR346 molecular chaperone DnaK YP_002898130.1 3338267 R 536230 CDS YP_002898131.1 237813680 7888409 complement(3340355..3340636) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; thioredoxin family protein 3340636 7888409 GBP346_A3457 Burkholderia pseudomallei MSHR346 thioredoxin family protein YP_002898131.1 3340355 R 536230 CDS YP_002898132.1 237813681 7888604 complement(3340801..3341358) 1 NC_012695.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 3341358 grpE 7888604 grpE Burkholderia pseudomallei MSHR346 heat shock protein GrpE YP_002898132.1 3340801 R 536230 CDS YP_002898133.1 237813682 7890181 3341722..3341883 1 NC_012695.1 hypothetical protein 3341883 7890181 GBP346_A3460 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898133.1 3341722 D 536230 CDS YP_002898134.1 237813683 7888075 complement(3341855..3342262) 1 NC_012695.1 identified by match to protein family HMM PF01479; heat shock protein 15 3342262 7888075 GBP346_A3459 Burkholderia pseudomallei MSHR346 heat shock protein 15 YP_002898134.1 3341855 R 536230 CDS YP_002898135.1 237813684 7890596 complement(3342268..3343371) 1 NC_012695.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3343371 hemH 7890596 hemH Burkholderia pseudomallei MSHR346 ferrochelatase YP_002898135.1 3342268 R 536230 CDS YP_002898136.1 237813685 7887204 complement(3343544..3344761) 1 NC_012695.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 3344761 hrcA 7887204 hrcA Burkholderia pseudomallei MSHR346 heat-inducible transcription repressor YP_002898136.1 3343544 R 536230 CDS YP_002898137.1 237813686 7886791 3344565..3345602 1 NC_012695.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 3345602 ppnK 7886791 ppnK Burkholderia pseudomallei MSHR346 NAD(+)/NADH kinase family protein YP_002898137.1 3344565 D 536230 CDS YP_002898138.1 237813687 7886803 3345632..3347281 1 NC_012695.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 3347281 recN 7886803 recN Burkholderia pseudomallei MSHR346 DNA repair protein RecN YP_002898138.1 3345632 D 536230 CDS YP_002898139.1 237813688 7889082 complement(3347650..3350427) 1 NC_012695.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3350427 glnE 7889082 glnE Burkholderia pseudomallei MSHR346 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_002898139.1 3347650 R 536230 CDS YP_002898140.1 237813689 7890161 3350594..3354787 1 NC_012695.1 identified by match to protein family HMM TIGR02099; hypothetical protein 3354787 7890161 GBP346_A3466 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898140.1 3350594 D 536230 CDS YP_002898141.1 237813690 7890844 3354839..3355666 1 NC_012695.1 identified by match to protein family HMM PF00795; hydrolase Sll0601 3355666 7890844 GBP346_A3467 Burkholderia pseudomallei MSHR346 hydrolase Sll0601 YP_002898141.1 3354839 D 536230 CDS YP_002898142.1 237813691 7888851 3355746..3357242 1 NC_012695.1 identified by match to protein family HMM PF01523; TldD protein 3357242 7888851 GBP346_A3468 Burkholderia pseudomallei MSHR346 TldD protein YP_002898142.1 3355746 D 536230 CDS YP_002898143.1 237813692 7888228 3357242..3357463 1 NC_012695.1 hypothetical protein 3357463 7888228 GBP346_A3469 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898143.1 3357242 D 536230 CDS YP_002898144.1 237813693 7890916 3357460..3358725 1 NC_012695.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3358725 7890916 GBP346_A3470 Burkholderia pseudomallei MSHR346 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002898144.1 3357460 D 536230 CDS YP_002898145.1 237813694 7887095 complement(3359004..3360212) 1 NC_012695.1 identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970; oxidoreductase NAD-binding domain protein 3360212 7887095 GBP346_A3471 Burkholderia pseudomallei MSHR346 oxidoreductase NAD-binding domain protein YP_002898145.1 3359004 R 536230 CDS YP_002898146.1 237813695 7888946 complement(3360324..3360899) 1 NC_012695.1 identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 3360899 7888946 GBP346_A3472 Burkholderia pseudomallei MSHR346 ATP:cob(I)alamin adenosyltransferase YP_002898146.1 3360324 R 536230 CDS YP_002898147.1 237813696 7889243 3361060..3362469 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; D-lactate dehydrogenase (cytochrome) 3362469 7889243 GBP346_A3473 Burkholderia pseudomallei MSHR346 D-lactate dehydrogenase (cytochrome) YP_002898147.1 3361060 D 536230 CDS YP_002898148.1 237813697 7889906 3362534..3364027 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase, subunit GlcD 3364027 7889906 GBP346_A3474 Burkholderia pseudomallei MSHR346 glycolate oxidase, subunit GlcD YP_002898148.1 3362534 D 536230 CDS YP_002898149.1 237813698 7889852 3364129..3365217 1 NC_012695.1 identified by match to protein family HMM PF01565; glycolate oxidase FAD binding subunit 3365217 glcE 7889852 glcE Burkholderia pseudomallei MSHR346 glycolate oxidase FAD binding subunit YP_002898149.1 3364129 D 536230 CDS YP_002898150.1 237813699 7888386 3365224..3366450 1 NC_012695.1 identified by match to protein family HMM PF02754; glycolate oxidase iron-sulfur subunit 3366450 glcF 7888386 glcF Burkholderia pseudomallei MSHR346 glycolate oxidase iron-sulfur subunit YP_002898150.1 3365224 D 536230 CDS YP_002898151.1 237813700 7888812 3366710..3367408 1 NC_012695.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family 3367408 7888812 GBP346_A3477 Burkholderia pseudomallei MSHR346 pyridoxal phosphate enzyme, YggS family YP_002898151.1 3366710 D 536230 CDS YP_002898152.1 237813701 7889985 3367443..3368255 1 NC_012695.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3368255 proC 7889985 proC Burkholderia pseudomallei MSHR346 pyrroline-5-carboxylate reductase YP_002898152.1 3367443 D 536230 CDS YP_002898153.1 237813702 7890375 complement(3368703..3369518) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097; phosphonate ABC transporter, permease protein PhnE 3369518 phnE 7890375 phnE Burkholderia pseudomallei MSHR346 phosphonate ABC transporter, permease protein PhnE YP_002898153.1 3368703 R 536230 CDS YP_002898154.1 237813703 7888465 complement(3369515..3370510) 1 NC_012695.1 identified by match to protein family HMM TIGR01098; match to protein family HMM TIGR03431; phosphonate ABC transporter, periplasmic phosphonate binding protein 3370510 phnD 7888465 phnD Burkholderia pseudomallei MSHR346 phosphonate ABC transporter, periplasmic phosphonate binding protein YP_002898154.1 3369515 R 536230 CDS YP_002898155.1 237813704 7887222 complement(3370593..3371516) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02315; phosphonate ABC transporter, ATP-binding protein 3371516 phnC 7887222 phnC Burkholderia pseudomallei MSHR346 phosphonate ABC transporter, ATP-binding protein YP_002898155.1 3370593 R 536230 CDS YP_002898156.1 237813705 7887732 complement(3371750..3372883) 1 NC_012695.1 identified by match to protein family HMM PF07969; match to protein family HMM TIGR02318; phosphonate metabolism protein PhnM 3372883 phnM 7887732 phnM Burkholderia pseudomallei MSHR346 phosphonate metabolism protein PhnM YP_002898156.1 3371750 R 536230 CDS YP_002898157.1 237813706 7889518 complement(3372895..3373692) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02324; phosphonate C-P lyase system protein PhnL 3373692 phnL 7889518 phnL Burkholderia pseudomallei MSHR346 phosphonate C-P lyase system protein PhnL YP_002898157.1 3372895 R 536230 CDS YP_002898158.1 237813707 7887616 complement(3373701..3374471) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02323; phosphonate C-P lyase system protein PhnK 3374471 phnK 7887616 phnK Burkholderia pseudomallei MSHR346 phosphonate C-P lyase system protein PhnK YP_002898158.1 3373701 R 536230 CDS YP_002898159.1 237813708 7890629 complement(3374468..3375442) 1 NC_012695.1 identified by match to protein family HMM PF06007; phosphonate metabolism protein PhnJ 3375442 phnJ 7890629 phnJ Burkholderia pseudomallei MSHR346 phosphonate metabolism protein PhnJ YP_002898159.1 3374468 R 536230 CDS YP_002898160.1 237813709 7889415 complement(3375439..3376653) 1 NC_012695.1 identified by match to protein family HMM PF05861; phosphonate metabolism protein 3376653 7889415 GBP346_A3486 Burkholderia pseudomallei MSHR346 phosphonate metabolism protein YP_002898160.1 3375439 R 536230 CDS YP_002898161.1 237813710 7889918 complement(3376647..3377276) 1 NC_012695.1 identified by match to protein family HMM PF05845; match to protein family HMM TIGR03292; carbon-phosphorus lyase complex subunit 3377276 phnH 7889918 phnH Burkholderia pseudomallei MSHR346 carbon-phosphorus lyase complex subunit YP_002898161.1 3376647 R 536230 CDS YP_002898162.1 237813711 7888504 complement(3377273..3377821) 1 NC_012695.1 identified by match to protein family HMM PF06754; match to protein family HMM TIGR03293; phosphonate C-P lyase system protein PhnG 3377821 phnG 7888504 phnG Burkholderia pseudomallei MSHR346 phosphonate C-P lyase system protein PhnG YP_002898162.1 3377273 R 536230 CDS YP_002898163.1 237813712 7886760 3377996..3378772 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02325; phosphonate metabolism transcriptional regulator PhnF 3378772 phnF 7886760 phnF Burkholderia pseudomallei MSHR346 phosphonate metabolism transcriptional regulator PhnF YP_002898163.1 3377996 D 536230 CDS YP_002898164.1 237813713 7890378 3378762..3379559 1 NC_012695.1 identified by match to protein family HMM PF06299; match to protein family HMM TIGR03223; putative phosphonate metabolism protein 3379559 7890378 GBP346_A3490 Burkholderia pseudomallei MSHR346 putative phosphonate metabolism protein YP_002898164.1 3378762 D 536230 CDS YP_002898165.1 237813714 7887846 3379556..3380110 1 NC_012695.1 identified by match to protein family HMM TIGR02322; phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn 3380110 phnN 7887846 phnN Burkholderia pseudomallei MSHR346 phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn YP_002898165.1 3379556 D 536230 CDS YP_002898166.1 237813715 7890812 complement(3380526..3381389) 1 NC_012695.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 3381389 ubiA 7890812 ubiA Burkholderia pseudomallei MSHR346 4-hydroxybenzoate octaprenyltransferase YP_002898166.1 3380526 R 536230 CDS YP_002898167.1 237813716 7890392 complement(3381915..3382379) 1 NC_012695.1 identified by match to protein family HMM PF01638; transcriptional regulatory protein 3382379 7890392 GBP346_A3493 Burkholderia pseudomallei MSHR346 transcriptional regulatory protein YP_002898167.1 3381915 R 536230 CDS YP_002898168.1 237813717 7887878 complement(3382453..3382623) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; transcriptional regulatory protein 3382623 7887878 GBP346_A3494 Burkholderia pseudomallei MSHR346 transcriptional regulatory protein YP_002898168.1 3382453 R 536230 CDS YP_002898169.1 237813718 7888186 complement(3382736..3383224) 1 NC_012695.1 identified by match to protein family HMM PF00210; DpsA 3383224 7888186 GBP346_A3495 Burkholderia pseudomallei MSHR346 DpsA YP_002898169.1 3382736 R 536230 CDS YP_002898170.1 237813719 7886994 3383244..3383381 1 NC_012695.1 hypothetical protein 3383381 7886994 GBP346_A3496 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898170.1 3383244 D 536230 CDS YP_002898171.1 237813720 7889254 complement(3383424..3383588) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3383588 7889254 GBP346_A3497 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898171.1 3383424 R 536230 CDS YP_002898172.1 237813721 7887364 complement(3383696..3385882) 1 NC_012695.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 3385882 katG 7887364 katG Burkholderia pseudomallei MSHR346 catalase/peroxidase HPI YP_002898172.1 3383696 R 536230 CDS YP_002898173.1 237813722 7890184 3385853..3385981 1 NC_012695.1 hypothetical protein 3385981 7890184 GBP346_A3499 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898173.1 3385853 D 536230 CDS YP_002898174.1 237813723 7887791 complement(3386368..3387327) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; oxidative stress regulatory protein OxyR 3387327 7887791 GBP346_A3500 Burkholderia pseudomallei MSHR346 oxidative stress regulatory protein OxyR YP_002898174.1 3386368 R 536230 CDS YP_002898175.1 237813724 7889486 complement(3387463..3390183) 1 NC_012695.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3390183 recG 7889486 recG Burkholderia pseudomallei MSHR346 ATP-dependent DNA helicase RecG YP_002898175.1 3387463 R 536230 CDS YP_002898176.1 237813725 7888261 3390338..3391420 1 NC_012695.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3391420 queA 7888261 queA Burkholderia pseudomallei MSHR346 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002898176.1 3390338 D 536230 CDS YP_002898177.1 237813726 7888722 3391713..3392897 1 NC_012695.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3392897 tgt 7888722 tgt Burkholderia pseudomallei MSHR346 queuine tRNA-ribosyltransferase YP_002898177.1 3391713 D 536230 CDS YP_002898178.1 237813727 7887373 3393077..3393241 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3393241 7887373 GBP346_A3504 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898178.1 3393077 D 536230 CDS YP_002898179.1 237813728 7890891 3393332..3393658 1 NC_012695.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3393658 yajC 7890891 yajC Burkholderia pseudomallei MSHR346 preprotein translocase subunit YajC YP_002898179.1 3393332 D 536230 CDS YP_002898180.1 237813729 7890396 3393765..3395792 1 NC_012695.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3395792 secD 7890396 secD Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecD YP_002898180.1 3393765 D 536230 CDS YP_002898181.1 237813730 7887876 3395808..3396758 1 NC_012695.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3396758 secF 7887876 secF Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecF YP_002898181.1 3395808 D 536230 CDS YP_002898182.1 237813731 7890399 complement(3397003..3398583) 1 NC_012695.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 3398583 7890399 GBP346_A3508 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002898182.1 3397003 R 536230 CDS YP_002898183.1 237813732 7889288 complement(3398612..3399190) 1 NC_012695.1 identified by match to protein family HMM PF04264; YceI 3399190 7889288 GBP346_A3509 Burkholderia pseudomallei MSHR346 YceI YP_002898183.1 3398612 R 536230 CDS YP_002898184.1 237813733 7890737 complement(3399257..3399817) 1 NC_012695.1 identified by match to protein family HMM PF04264; hypothetical protein 3399817 7890737 GBP346_A3510 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898184.1 3399257 R 536230 CDS YP_002898185.1 237813734 7888738 complement(3399829..3400392) 1 NC_012695.1 identified by match to protein family HMM PF01292; cytochrome B561 3400392 7888738 GBP346_A3511 Burkholderia pseudomallei MSHR346 cytochrome B561 YP_002898185.1 3399829 R 536230 CDS YP_002898186.1 237813735 7890635 3400391..3400591 1 NC_012695.1 hypothetical protein 3400591 7890635 GBP346_A3512 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898186.1 3400391 D 536230 CDS YP_002898187.1 237813736 7890713 3400657..3401313 1 NC_012695.1 identified by match to protein family HMM PF04403; paraquat-inducible protein A 3401313 7890713 GBP346_A3513 Burkholderia pseudomallei MSHR346 paraquat-inducible protein A YP_002898187.1 3400657 D 536230 CDS YP_002898188.1 237813737 7889869 3401310..3401972 1 NC_012695.1 identified by match to protein family HMM PF04403; paraquat-inducible protein A 3401972 7889869 GBP346_A3514 Burkholderia pseudomallei MSHR346 paraquat-inducible protein A YP_002898188.1 3401310 D 536230 CDS YP_002898189.1 237813738 7888222 3402052..3403620 1 NC_012695.1 identified by match to protein family HMM PF02470; paraquat-inducible protein 3403620 7888222 GBP346_A3515 Burkholderia pseudomallei MSHR346 paraquat-inducible protein YP_002898189.1 3402052 D 536230 CDS YP_002898190.1 237813739 7890321 3403617..3404387 1 NC_012695.1 identified by match to protein family HMM PF03886; putative lipoprotein 3404387 7890321 GBP346_A3516 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898190.1 3403617 D 536230 CDS YP_002898191.1 237813740 7887769 complement(3404953..3405069) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3405069 7887769 GBP346_A3517 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898191.1 3404953 R 536230 CDS YP_002898192.1 237813741 7887818 complement(3405090..3405206) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3405206 7887818 GBP346_A3518 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898192.1 3405090 R 536230 CDS YP_002898193.1 237813742 7887332 3405306..3407423 1 NC_012695.1 hypothetical protein 3407423 7887332 GBP346_A3519 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898193.1 3405306 D 536230 CDS YP_002898194.1 237813743 7890451 3407592..3408884 1 NC_012695.1 identified by match to protein family HMM PF01170; match to protein family HMM PF02926; thump domain protein 3408884 7890451 GBP346_A3520 Burkholderia pseudomallei MSHR346 thump domain protein YP_002898194.1 3407592 D 536230 CDS YP_002898195.1 237813744 7887527 3408917..3409474 1 NC_012695.1 hypothetical protein 3409474 7887527 GBP346_A3521 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898195.1 3408917 D 536230 CDS YP_002898196.1 237813745 7889263 complement(3409632..3410144) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3410144 7889263 GBP346_A3522 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898196.1 3409632 R 536230 CDS YP_002898197.1 237813746 7887387 3410282..3410692 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; glyoxalase family protein 3410692 7887387 GBP346_A3523 Burkholderia pseudomallei MSHR346 glyoxalase family protein YP_002898197.1 3410282 D 536230 CDS YP_002898198.1 237813747 7888337 3410856..3411893 1 NC_012695.1 identified by match to protein family HMM PF08279; putative transcriptional regulator 3411893 7888337 GBP346_A3524 Burkholderia pseudomallei MSHR346 putative transcriptional regulator YP_002898198.1 3410856 D 536230 CDS YP_002898199.1 237813748 7886802 complement(3412250..3412363) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3412363 7886802 GBP346_A3525 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898199.1 3412250 R 536230 CDS YP_002898200.1 237813749 7888498 complement(3412490..3413950) 1 NC_012695.1 identified by match to protein family HMM PF02233; NAD(P) transhydrogenase, beta subunit 3413950 7888498 GBP346_A3526 Burkholderia pseudomallei MSHR346 NAD(P) transhydrogenase, beta subunit YP_002898200.1 3412490 R 536230 CDS YP_002898201.1 237813750 7889821 complement(3413947..3414276) 1 NC_012695.1 NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) 3414276 7889821 GBP346_A3527 Burkholderia pseudomallei MSHR346 NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) YP_002898201.1 3413947 R 536230 CDS YP_002898202.1 237813751 7888191 complement(3414289..3415428) 1 NC_012695.1 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) 3415428 7888191 GBP346_A3528 Burkholderia pseudomallei MSHR346 NAD(P) transhydrogenase subunit alpha (Pyridinenucleotide transhydrogenase subunit alpha) (Nicotinamide nucleotidetranshydrogenase subunit alpha) YP_002898202.1 3414289 R 536230 CDS YP_002898203.1 237813752 7886703 3415672..3416181 1 NC_012695.1 identified by match to protein family HMM PF00293; hydrolase, nudix family 3416181 7886703 GBP346_A3529 Burkholderia pseudomallei MSHR346 hydrolase, nudix family YP_002898203.1 3415672 D 536230 CDS YP_002898204.1 237813753 7887280 3416178..3417329 1 NC_012695.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3417329 mnmA 7887280 mnmA Burkholderia pseudomallei MSHR346 tRNA-specific 2-thiouridylase MnmA YP_002898204.1 3416178 D 536230 CDS YP_002898205.1 237813754 7890540 3417451..3419091 1 NC_012695.1 identified by match to protein family HMM PF01645; glutamate synthase domain protein 3419091 7890540 GBP346_A3531 Burkholderia pseudomallei MSHR346 glutamate synthase domain protein YP_002898205.1 3417451 D 536230 CDS YP_002898206.1 237813755 7890933 complement(3419360..3419971) 1 NC_012695.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 3419971 7890933 GBP346_A3532 Burkholderia pseudomallei MSHR346 glutathione S-transferase YP_002898206.1 3419360 R 536230 CDS YP_002898207.1 237813756 7889677 complement(3420017..3420469) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3420469 7889677 GBP346_A3533 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898207.1 3420017 R 536230 CDS YP_002898208.1 237813757 7887800 3420521..3421930 1 NC_012695.1 identified by match to protein family HMM PF00557; match to protein family HMM PF05195; Xaa-Pro aminopeptidase 3421930 pepP 7887800 pepP Burkholderia pseudomallei MSHR346 Xaa-Pro aminopeptidase YP_002898208.1 3420521 D 536230 CDS YP_002898209.1 237813758 7889814 3421927..3423168 1 NC_012695.1 identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; hypothetical protein 3423168 7889814 GBP346_A3535 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898209.1 3421927 D 536230 CDS YP_002898210.1 237813759 7888286 3423376..3424440 1 NC_012695.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; tRNA-dihydrouridine synthase B 3424440 7888286 GBP346_A3536 Burkholderia pseudomallei MSHR346 tRNA-dihydrouridine synthase B YP_002898210.1 3423376 D 536230 CDS YP_002898211.1 237813760 7890572 3424437..3424670 1 NC_012695.1 identified by match to protein family HMM PF02954; DNA-binding protein Fis 3424670 7890572 GBP346_A3537 Burkholderia pseudomallei MSHR346 DNA-binding protein Fis YP_002898211.1 3424437 D 536230 CDS YP_002898212.1 237813761 7890669 3424715..3426280 1 NC_012695.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3426280 purH 7890669 purH Burkholderia pseudomallei MSHR346 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002898212.1 3424715 D 536230 CDS YP_002898213.1 237813762 7890239 complement(3426274..3426627) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3426627 7890239 GBP346_A3538 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898213.1 3426274 R 536230 CDS YP_002898214.1 237813763 7887801 3426647..3427189 1 NC_012695.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3427189 ruvC 7887801 ruvC Burkholderia pseudomallei MSHR346 Holliday junction resolvase YP_002898214.1 3426647 D 536230 CDS YP_002898215.1 237813764 7889234 3427263..3427844 1 NC_012695.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3427844 ruvA 7889234 ruvA Burkholderia pseudomallei MSHR346 Holliday junction DNA helicase RuvA YP_002898215.1 3427263 D 536230 CDS YP_002898216.1 237813765 7889787 3428012..3429082 1 NC_012695.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3429082 ruvB 7889787 ruvB Burkholderia pseudomallei MSHR346 Holliday junction DNA helicase RuvB YP_002898216.1 3428012 D 536230 CDS YP_002898217.1 237813766 7886928 3429108..3430064 1 NC_012695.1 hypothetical protein 3430064 7886928 GBP346_A3543 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898217.1 3429108 D 536230 CDS YP_002898218.1 237813767 7888479 3430196..3431338 1 NC_012695.1 identified by match to protein family HMM PF08857; putative lipoprotein 3431338 7888479 GBP346_A3544 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898218.1 3430196 D 536230 CDS YP_002898219.1 237813768 7889132 complement(3431494..3432156) 1 NC_012695.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 3432156 7889132 GBP346_A3545 Burkholderia pseudomallei MSHR346 phosphoglycerate mutase family protein YP_002898219.1 3431494 R 536230 CDS YP_002898220.1 237813769 7890929 complement(3432191..3432724) 1 NC_012695.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 3432724 dtd 7890929 dtd Burkholderia pseudomallei MSHR346 D-tyrosyl-tRNA(Tyr) deacylase YP_002898220.1 3432191 R 536230 CDS YP_002898221.1 237813770 7890432 complement(3432741..3434048) 1 NC_012695.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 3434048 tyrS 7890432 tyrS Burkholderia pseudomallei MSHR346 tyrosyl-tRNA synthetase YP_002898221.1 3432741 R 536230 CDS YP_002898222.1 237813771 7889315 3434160..3435323 1 NC_012695.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3435323 anmK 7889315 anmK Burkholderia pseudomallei MSHR346 anhydro-N-acetylmuramic acid kinase YP_002898222.1 3434160 D 536230 CDS YP_002898223.1 237813772 7887695 complement(3435429..3436127) 1 NC_012695.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 3436127 7887695 GBP346_A3549 Burkholderia pseudomallei MSHR346 glutathione S-transferase YP_002898223.1 3435429 R 536230 CDS YP_002898224.1 237813773 7888627 complement(3436132..3436836) 1 NC_012695.1 identified by match to protein family HMM PF02798; glutathione S-transferase domain protein 3436836 7888627 GBP346_A3550 Burkholderia pseudomallei MSHR346 glutathione S-transferase domain protein YP_002898224.1 3436132 R 536230 CDS YP_002898225.1 237813774 7889993 3436896..3437831 1 NC_012695.1 identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 3437831 7889993 GBP346_A3551 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002898225.1 3436896 D 536230 CDS YP_002898226.1 237813775 7890019 complement(3437970..3439190) 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 3439190 7890019 GBP346_A3552 Burkholderia pseudomallei MSHR346 transposase YP_002898226.1 3437970 R 536230 CDS YP_002898227.1 237813776 7890547 complement(3439320..3439688) 1 NC_012695.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 3439688 7890547 GBP346_A3553 Burkholderia pseudomallei MSHR346 iron-sulfur cluster insertion protein ErpA YP_002898227.1 3439320 R 536230 CDS YP_002898228.1 237813777 7888205 complement(3439895..3440287) 1 NC_012695.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3440287 rpsI 7888205 rpsI Burkholderia pseudomallei MSHR346 30S ribosomal protein S9 YP_002898228.1 3439895 R 536230 CDS YP_002898229.1 237813778 7886952 complement(3440299..3440838) 1 NC_012695.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3440838 rplM 7886952 rplM Burkholderia pseudomallei MSHR346 50S ribosomal protein L13 YP_002898229.1 3440299 R 536230 CDS YP_002898230.1 237813779 7886962 3441031..3441195 1 NC_012695.1 hypothetical protein 3441195 7886962 GBP346_A3556 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898230.1 3441031 D 536230 CDS YP_002898231.1 237813780 7888598 3441355..3441819 1 NC_012695.1 identified by match to protein family HMM PF02566; OsmC/Ohr family protein 3441819 7888598 GBP346_A3557 Burkholderia pseudomallei MSHR346 OsmC/Ohr family protein YP_002898231.1 3441355 D 536230 CDS YP_002898232.1 237813781 7889166 complement(3442486..3443601) 1 NC_012695.1 hypothetical protein 3443601 7889166 GBP346_A3559 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898232.1 3442486 R 536230 CDS YP_002898233.1 237813782 7888613 complement(3443678..3444736) 1 NC_012695.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3444736 pyrC 7888613 pyrC Burkholderia pseudomallei MSHR346 dihydroorotase YP_002898233.1 3443678 R 536230 CDS YP_002898234.1 237813783 7889603 complement(3444733..3444891) 1 NC_012695.1 hypothetical protein 3444891 7889603 GBP346_A3561 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898234.1 3444733 R 536230 CDS YP_002898235.1 237813784 7890898 3444910..3445860 1 NC_012695.1 identified by match to protein family HMM PF00310; glutamine amidotransferase class-II 3445860 7890898 GBP346_A3562 Burkholderia pseudomallei MSHR346 glutamine amidotransferase class-II YP_002898235.1 3444910 D 536230 CDS YP_002898236.1 237813785 7887759 complement(3445982..3446185) 1 NC_012695.1 hypothetical protein 3446185 7887759 GBP346_A3563 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898236.1 3445982 R 536230 CDS YP_002898237.1 237813786 7889642 complement(3446307..3446528) 1 NC_012695.1 hypothetical protein 3446528 7889642 GBP346_A3564 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898237.1 3446307 R 536230 CDS YP_002898238.1 237813787 7886856 complement(3447021..3447440) 1 NC_012695.1 identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family 3447440 7886856 GBP346_A3565 Burkholderia pseudomallei MSHR346 heat shock protein, Hsp20 family YP_002898238.1 3447021 R 536230 CDS YP_002898239.1 237813788 7887264 complement(3447506..3447946) 1 NC_012695.1 identified by match to protein family HMM PF00011; heat shock protein, Hsp20 family 3447946 7887264 GBP346_A3566 Burkholderia pseudomallei MSHR346 heat shock protein, Hsp20 family YP_002898239.1 3447506 R 536230 CDS YP_002898240.1 237813789 7890691 complement(3448082..3448210) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3448210 7890691 GBP346_A3567 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898240.1 3448082 R 536230 CDS YP_002898241.1 237813790 7889128 3448408..3448725 1 NC_012695.1 identified by match to protein family HMM PF00166; chaperonin GroS 3448725 groS_2 7889128 groS_2 Burkholderia pseudomallei MSHR346 chaperonin GroS YP_002898241.1 3448408 D 536230 CDS YP_002898242.1 237813791 7887927 3448832..3450451 1 NC_012695.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 3450451 groEL 7887927 groEL Burkholderia pseudomallei MSHR346 chaperonin GroEL YP_002898242.1 3448832 D 536230 CDS YP_002898243.1 237813792 7886921 3450469..3450582 1 NC_012695.1 hypothetical protein 3450582 7886921 GBP346_A3570 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898243.1 3450469 D 536230 CDS YP_002898244.1 237813793 7889765 3450573..3450827 1 NC_012695.1 hypothetical protein 3450827 7889765 GBP346_A3571 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898244.1 3450573 D 536230 CDS YP_002898245.1 237813794 7890336 complement(3450881..3452101) 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 3452101 7890336 GBP346_A3572 Burkholderia pseudomallei MSHR346 transposase YP_002898245.1 3450881 R 536230 CDS YP_002898246.1 237813795 7888055 complement(3452251..3452976) 1 NC_012695.1 identified by match to protein family HMM PF00005; glutamate/aspartate ABC transporter, ATP-binding protein 3452976 gltL_2 7888055 gltL_2 Burkholderia pseudomallei MSHR346 glutamate/aspartate ABC transporter, ATP-binding protein YP_002898246.1 3452251 R 536230 CDS YP_002898247.1 237813796 7887667 complement(3452973..3453650) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate/aspartate ABC transporter, permease protein GltK 3453650 7887667 GBP346_A3574 Burkholderia pseudomallei MSHR346 glutamate/aspartate ABC transporter, permease protein GltK YP_002898247.1 3452973 R 536230 CDS YP_002898248.1 237813797 7887543 complement(3453650..3454390) 1 NC_012695.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamate/aspartate ABC transporter, permease protein GltJ 3454390 7887543 GBP346_A3575 Burkholderia pseudomallei MSHR346 glutamate/aspartate ABC transporter, permease protein GltJ YP_002898248.1 3453650 R 536230 CDS YP_002898249.1 237813798 7887639 complement(3454473..3455459) 1 NC_012695.1 identified by match to protein family HMM PF00497; glutamate/aspartate periplasmic-binding protein 3455459 7887639 GBP346_A3576 Burkholderia pseudomallei MSHR346 glutamate/aspartate periplasmic-binding protein YP_002898249.1 3454473 R 536230 CDS YP_002898250.1 237813799 7889269 complement(3455599..3456903) 1 NC_012695.1 identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase (GDH) 3456903 7889269 GBP346_A3577 Burkholderia pseudomallei MSHR346 glutamate dehydrogenase (GDH) YP_002898250.1 3455599 R 536230 CDS YP_002898251.1 237813800 7889916 3456902..3457159 1 NC_012695.1 hypothetical protein 3457159 7889916 GBP346_A3578 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898251.1 3456902 D 536230 CDS YP_002898252.1 237813801 7888927 complement(3457284..3458234) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3458234 7888927 GBP346_A3579 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898252.1 3457284 R 536230 CDS YP_002898253.1 237813802 7887334 complement(3458401..3458568) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3458568 7887334 GBP346_A3580 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898253.1 3458401 R 536230 CDS YP_002898254.1 237813803 7888615 3458703..3460109 1 NC_012695.1 identified by match to protein family HMM PF07690; nitrate transporter 3460109 7888615 GBP346_A3581 Burkholderia pseudomallei MSHR346 nitrate transporter YP_002898254.1 3458703 D 536230 CDS YP_002898255.1 237813804 7889982 3460217..3461605 1 NC_012695.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3461605 purB 7889982 purB Burkholderia pseudomallei MSHR346 adenylosuccinate lyase YP_002898255.1 3460217 D 536230 CDS YP_002898256.1 237813805 7888542 complement(3461699..3462217) 1 NC_012695.1 identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313; shikimate kinase 3462217 aroK_1 7888542 aroK_1 Burkholderia pseudomallei MSHR346 shikimate kinase YP_002898256.1 3461699 R 536230 CDS YP_002898257.1 237813806 7889556 complement(3462231..3463592) 1 NC_012695.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; transporter, gluconate:H+ symporter (GntP) family 3463592 7889556 GBP346_A3584 Burkholderia pseudomallei MSHR346 transporter, gluconate:H+ symporter (GntP) family YP_002898257.1 3462231 R 536230 CDS YP_002898258.1 237813807 7887880 3463578..3463694 1 NC_012695.1 hypothetical protein 3463694 7887880 GBP346_A3585 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898258.1 3463578 D 536230 CDS YP_002898259.1 237813808 7890761 complement(3463812..3464438) 1 NC_012695.1 identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; khg/kdpg aldolase 3464438 7890761 GBP346_A3586 Burkholderia pseudomallei MSHR346 khg/kdpg aldolase YP_002898259.1 3463812 R 536230 CDS YP_002898260.1 237813809 7888181 complement(3464460..3466313) 1 NC_012695.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3466313 edd 7888181 edd Burkholderia pseudomallei MSHR346 phosphogluconate dehydratase YP_002898260.1 3464460 R 536230 CDS YP_002898261.1 237813810 7889440 3466299..3466490 1 NC_012695.1 hypothetical protein 3466490 7889440 GBP346_A3588 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898261.1 3466299 D 536230 CDS YP_002898262.1 237813811 7890468 3466611..3467609 1 NC_012695.1 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; HTH-type transcriptional regulator HexR 3467609 7890468 GBP346_A3589 Burkholderia pseudomallei MSHR346 HTH-type transcriptional regulator HexR YP_002898262.1 3466611 D 536230 CDS YP_002898263.1 237813812 7890946 3467703..3468104 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3468104 7890946 GBP346_A3591 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898263.1 3467703 D 536230 CDS YP_002898264.1 237813813 7887398 complement(3468091..3468513) 1 NC_012695.1 identified by match to protein family HMM PF03653; hypothetical protein 3468513 7887398 GBP346_A3590 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898264.1 3468091 R 536230 CDS YP_002898265.1 237813814 7890229 complement(3468531..3469802) 1 NC_012695.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3469802 proA 7890229 proA Burkholderia pseudomallei MSHR346 gamma-glutamyl phosphate reductase YP_002898265.1 3468531 R 536230 CDS YP_002898266.1 237813815 7888255 complement(3469939..3471027) 1 NC_012695.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3471027 holA 7888255 holA Burkholderia pseudomallei MSHR346 DNA polymerase III subunit delta YP_002898266.1 3469939 R 536230 CDS YP_002898267.1 237813816 7887126 complement(3471073..3471624) 1 NC_012695.1 identified by match to protein family HMM PF04390; lipoprotein, RlpB family 3471624 7887126 GBP346_A3594 Burkholderia pseudomallei MSHR346 lipoprotein, RlpB family YP_002898267.1 3471073 R 536230 CDS YP_002898268.1 237813817 7888805 complement(3471666..3474260) 1 NC_012695.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3474260 leuS 7888805 leuS Burkholderia pseudomallei MSHR346 leucyl-tRNA synthetase YP_002898268.1 3471666 R 536230 CDS YP_002898269.1 237813818 7887886 complement(3474435..3474965) 1 NC_012695.1 identified by match to protein family HMM PF02472; transport energizing protein, ExbD/TolR family 3474965 7887886 GBP346_A3596 Burkholderia pseudomallei MSHR346 transport energizing protein, ExbD/TolR family YP_002898269.1 3474435 R 536230 CDS YP_002898270.1 237813819 7888128 complement(3475006..3475713) 1 NC_012695.1 identified by match to protein family HMM PF01618; transporter, MotA/TolQ/ExbB proton channel family 3475713 7888128 GBP346_A3597 Burkholderia pseudomallei MSHR346 transporter, MotA/TolQ/ExbB proton channel family YP_002898270.1 3475006 R 536230 CDS YP_002898271.1 237813820 7886789 complement(3475742..3476548) 1 NC_012695.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3476548 dapB 7886789 dapB Burkholderia pseudomallei MSHR346 dihydrodipicolinate reductase YP_002898271.1 3475742 R 536230 CDS YP_002898272.1 237813821 7889428 complement(3476619..3477380) 1 NC_012695.1 identified by match to protein family HMM PF04355; lipoprotein, SmpA/OmlA family 3477380 7889428 GBP346_A3599 Burkholderia pseudomallei MSHR346 lipoprotein, SmpA/OmlA family YP_002898272.1 3476619 R 536230 CDS YP_002898273.1 237813822 7888687 3477564..3477992 1 NC_012695.1 identified by match to protein family HMM PF01475; ferric uptake regulation protein 3477992 7888687 GBP346_A3600 Burkholderia pseudomallei MSHR346 ferric uptake regulation protein YP_002898273.1 3477564 D 536230 CDS YP_002898274.1 237813823 7888100 complement(3478129..3478653) 1 NC_012695.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 3478653 allA_2 7888100 allA_2 Burkholderia pseudomallei MSHR346 ureidoglycolate hydrolase YP_002898274.1 3478129 R 536230 CDS YP_002898275.1 237813824 7887141 complement(3478667..3479740) 1 NC_012695.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 3479740 alc 7887141 alc Burkholderia pseudomallei MSHR346 allantoicase YP_002898275.1 3478667 R 536230 CDS YP_002898276.1 237813825 7889425 complement(3479815..3481137) 1 NC_012695.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 3481137 7889425 GBP346_A3603 Burkholderia pseudomallei MSHR346 C4-dicarboxylate transporter DctA YP_002898276.1 3479815 R 536230 CDS YP_002898277.1 237813826 7888524 3481383..3482075 1 NC_012695.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; transcriptional regulator, GntR family 3482075 7888524 GBP346_A3604 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family YP_002898277.1 3481383 D 536230 CDS YP_002898278.1 237813827 7890752 3482347..3482484 1 NC_012695.1 FOG LysM repeat protein 3482484 7890752 GBP346_A3605 Burkholderia pseudomallei MSHR346 FOG LysM repeat protein YP_002898278.1 3482347 D 536230 CDS YP_002898279.1 237813828 7888070 complement(3482727..3483662) 1 NC_012695.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 3483662 7888070 GBP346_A3606 Burkholderia pseudomallei MSHR346 DNA-binding transcriptional regulator CynR YP_002898279.1 3482727 R 536230 CDS YP_002898280.1 237813829 7886922 3483777..3484436 1 NC_012695.1 identified by match to protein family HMM PF00484; carbonate dehydratase 3484436 7886922 GBP346_A3607 Burkholderia pseudomallei MSHR346 carbonate dehydratase YP_002898280.1 3483777 D 536230 CDS YP_002898281.1 237813830 7888342 3484523..3484993 1 NC_012695.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 3484993 cynS 7888342 cynS Burkholderia pseudomallei MSHR346 cyanate hydratase YP_002898281.1 3484523 D 536230 CDS YP_002898282.1 237813831 7887487 3485175..3486374 1 NC_012695.1 identified by match to protein family HMM PF07690; major facilitator family transporter 3486374 7887487 GBP346_A3609 Burkholderia pseudomallei MSHR346 major facilitator family transporter YP_002898282.1 3485175 D 536230 CDS YP_002898283.1 237813832 7888268 3486404..3486688 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3486688 7888268 GBP346_A3610 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898283.1 3486404 D 536230 CDS YP_002898284.1 237813833 7889499 complement(3486782..3487792) 1 NC_012695.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 3487792 gap 7889499 gap Burkholderia pseudomallei MSHR346 glyceraldehyde-3-phosphate dehydrogenase, type I YP_002898284.1 3486782 R 536230 CDS YP_002898285.1 237813834 7890781 complement(3487883..3489955) 1 NC_012695.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3489955 tkt 7890781 tkt Burkholderia pseudomallei MSHR346 transketolase YP_002898285.1 3487883 R 536230 CDS YP_002898286.1 237813835 7887842 complement(3490047..3490196) 1 NC_012695.1 hypothetical protein 3490196 7887842 GBP346_A3613 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898286.1 3490047 R 536230 CDS YP_002898287.1 237813836 7889931 3490173..3491030 1 NC_012695.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3491030 speE 7889931 speE Burkholderia pseudomallei MSHR346 spermidine synthase YP_002898287.1 3490173 D 536230 CDS YP_002898288.1 237813837 7890517 3491070..3491486 1 NC_012695.1 identified by match to protein family HMM PF00903; glyoxalase family protein 3491486 7890517 GBP346_A3615 Burkholderia pseudomallei MSHR346 glyoxalase family protein YP_002898288.1 3491070 D 536230 CDS YP_002898289.1 237813838 7889669 3491483..3492250 1 NC_012695.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3492250 7889669 GBP346_A3616 Burkholderia pseudomallei MSHR346 16S ribosomal RNA methyltransferase RsmE YP_002898289.1 3491483 D 536230 CDS YP_002898290.1 237813839 7887794 complement(3492415..3492579) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3492579 7887794 GBP346_A3617 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898290.1 3492415 R 536230 CDS YP_002898291.1 237813840 7890262 complement(3492662..3493225) 1 NC_012695.1 identified by match to protein family HMM PF01337; barstar (barnase inhibitor) 3493225 7890262 GBP346_A3618 Burkholderia pseudomallei MSHR346 barstar (barnase inhibitor) YP_002898291.1 3492662 R 536230 CDS YP_002898292.1 237813841 7886779 complement(3493242..3493673) 1 NC_012695.1 identified by match to protein family HMM PF00545; ribonuclease SA 3493673 7886779 GBP346_A3619 Burkholderia pseudomallei MSHR346 ribonuclease SA YP_002898292.1 3493242 R 536230 CDS YP_002898293.1 237813842 7889445 complement(3494002..3496311) 1 NC_012695.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 3496311 7889445 GBP346_A3620 Burkholderia pseudomallei MSHR346 malic enzyme YP_002898293.1 3494002 R 536230 CDS YP_002898294.1 237813843 7890563 3496513..3497514 1 NC_012695.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3497514 thiL 7890563 thiL Burkholderia pseudomallei MSHR346 thiamine monophosphate kinase YP_002898294.1 3496513 D 536230 CDS YP_002898295.1 237813844 7887632 3497504..3498121 1 NC_012695.1 identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 3498121 7887632 GBP346_A3622 Burkholderia pseudomallei MSHR346 phosphatidylglycerophosphatase A YP_002898295.1 3497504 D 536230 CDS YP_002898296.1 237813845 7889072 3498165..3498665 1 NC_012695.1 identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; CinA family protein 3498665 7889072 GBP346_A3623 Burkholderia pseudomallei MSHR346 CinA family protein YP_002898296.1 3498165 D 536230 CDS YP_002898297.1 237813846 7887265 complement(3498760..3498876) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3498876 7887265 GBP346_A3624 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898297.1 3498760 R 536230 CDS YP_002898298.1 237813847 7887221 complement(3498973..3499800) 1 NC_012695.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3499800 pyrF 7887221 pyrF Burkholderia pseudomallei MSHR346 orotidine 5'-phosphate decarboxylase YP_002898298.1 3498973 R 536230 CDS YP_002898299.1 237813848 7890684 complement(3499897..3500970) 1 NC_012695.1 identified by match to protein family HMM PF01263; aldose 1-epimerase family protein 3500970 7890684 GBP346_A3626 Burkholderia pseudomallei MSHR346 aldose 1-epimerase family protein YP_002898299.1 3499897 R 536230 CDS YP_002898300.1 237813849 7889342 complement(3501017..3501823) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 3501823 7889342 GBP346_A3627 Burkholderia pseudomallei MSHR346 oxidoreductase, short chain dehydrogenase/reductase family YP_002898300.1 3501017 R 536230 CDS YP_002898301.1 237813850 7890219 complement(3501862..3502866) 1 NC_012695.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease protein 3502866 araH 7890219 araH Burkholderia pseudomallei MSHR346 L-arabinose transporter permease protein YP_002898301.1 3501862 R 536230 CDS YP_002898302.1 237813851 7887917 complement(3502981..3504492) 1 NC_012695.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 3504492 araG 7887917 araG Burkholderia pseudomallei MSHR346 L-arabinose transporter ATP-binding protein YP_002898302.1 3502981 R 536230 CDS YP_002898303.1 237813852 7889712 complement(3504581..3505576) 1 NC_012695.1 identified by match to protein family HMM PF00532; match to protein family HMM TIGR01409; L-arabinose-binding periplasmic protein (ABP) 3505576 7889712 GBP346_A3630 Burkholderia pseudomallei MSHR346 L-arabinose-binding periplasmic protein (ABP) YP_002898303.1 3504581 R 536230 CDS YP_002898304.1 237813853 7888140 complement(3505706..3506485) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 3506485 7888140 GBP346_A3631 Burkholderia pseudomallei MSHR346 short chain dehydrogenase YP_002898304.1 3505706 R 536230 CDS YP_002898305.1 237813854 7887224 complement(3506482..3507171) 1 NC_012695.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 3507171 7887224 GBP346_A3632 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_002898305.1 3506482 R 536230 CDS YP_002898306.1 237813855 7888976 complement(3507209..3508222) 1 NC_012695.1 identified by match to protein family HMM PF05035; 2-dehydro-3-deoxygalactonokinase 3508222 7888976 GBP346_A3633 Burkholderia pseudomallei MSHR346 2-dehydro-3-deoxygalactonokinase YP_002898306.1 3507209 R 536230 CDS YP_002898307.1 237813856 7890829 complement(3508219..3509193) 1 NC_012695.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; transcriptional regulator, IclR family 3509193 7890829 GBP346_A3634 Burkholderia pseudomallei MSHR346 transcriptional regulator, IclR family YP_002898307.1 3508219 R 536230 CDS YP_002898308.1 237813857 7887967 complement(3509401..3509802) 1 NC_012695.1 hypothetical protein 3509802 7887967 GBP346_A3635 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898308.1 3509401 R 536230 CDS YP_002898309.1 237813858 7888872 3509801..3509920 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3509920 7888872 GBP346_A3637 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898309.1 3509801 D 536230 CDS YP_002898310.1 237813859 7889961 complement(3509893..3511527) 1 NC_012695.1 identified by match to protein family HMM PF00450; serine carboxypeptidase family protein 3511527 7889961 GBP346_A3636 Burkholderia pseudomallei MSHR346 serine carboxypeptidase family protein YP_002898310.1 3509893 R 536230 CDS YP_002898311.1 237813860 7887298 complement(3511735..3511893) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3511893 7887298 GBP346_A3638 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898311.1 3511735 R 536230 CDS YP_002898312.1 237813861 7890021 complement(3511987..3512757) 1 NC_012695.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3512757 mtgA 7890021 mtgA Burkholderia pseudomallei MSHR346 monofunctional biosynthetic peptidoglycan transglycosylase YP_002898312.1 3511987 R 536230 CDS YP_002898313.1 237813862 7890599 complement(3512778..3513656) 1 NC_012695.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3513656 aroE 7890599 aroE Burkholderia pseudomallei MSHR346 shikimate 5-dehydrogenase YP_002898313.1 3512778 R 536230 CDS YP_002898314.1 237813863 7890120 complement(3513653..3515731) 1 NC_012695.1 identified by match to protein family HMM PF00773; hypothetical protein 3515731 7890120 GBP346_A3641 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898314.1 3513653 R 536230 CDS YP_002898315.1 237813864 7890397 complement(3515752..3515868) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3515868 7890397 GBP346_A3642 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898315.1 3515752 R 536230 CDS YP_002898316.1 237813865 7888402 complement(3515855..3516424) 1 NC_012695.1 identified by match to protein family HMM PF05728; esterase 3516424 7888402 GBP346_A3643 Burkholderia pseudomallei MSHR346 esterase YP_002898316.1 3515855 R 536230 CDS YP_002898317.1 237813866 7888168 complement(3516421..3517935) 1 NC_012695.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01081; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 3517935 mpl 7888168 mpl Burkholderia pseudomallei MSHR346 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_002898317.1 3516421 R 536230 CDS YP_002898318.1 237813867 7889880 3518027..3518683 1 NC_012695.1 hypothetical protein 3518683 7889880 GBP346_A3645 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898318.1 3518027 D 536230 CDS YP_002898319.1 237813868 7889147 3518676..3519236 1 NC_012695.1 identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin family protein 3519236 7889147 GBP346_A3646 Burkholderia pseudomallei MSHR346 thioredoxin family protein YP_002898319.1 3518676 D 536230 CDS YP_002898320.1 237813869 7888605 3519297..3519884 1 NC_012695.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3519884 aroQ_1 7888605 aroQ_1 Burkholderia pseudomallei MSHR346 3-dehydroquinate dehydratase YP_002898320.1 3519297 D 536230 CDS YP_002898321.1 237813870 7889080 3519952..3520425 1 NC_012695.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3520425 accB 7889080 accB Burkholderia pseudomallei MSHR346 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_002898321.1 3519952 D 536230 CDS YP_002898322.1 237813871 7889626 3520510..3521877 1 NC_012695.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3521877 accC_1 7889626 accC_1 Burkholderia pseudomallei MSHR346 acetyl-CoA carboxylase biotin carboxylase subunit YP_002898322.1 3520510 D 536230 CDS YP_002898323.1 237813872 7887210 3521874..3522782 1 NC_012695.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3522782 prmA 7887210 prmA Burkholderia pseudomallei MSHR346 ribosomal protein L11 methyltransferase YP_002898323.1 3521874 D 536230 CDS YP_002898324.1 237813873 7890548 3522830..3524257 1 NC_012695.1 identified by match to protein family HMM TIGR02098; zinc finger/thioredoxin domain protein 3524257 7890548 GBP346_A3651 Burkholderia pseudomallei MSHR346 zinc finger/thioredoxin domain protein YP_002898324.1 3522830 D 536230 CDS YP_002898325.1 237813874 7890384 3524325..3524828 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; Redoxin superfamily protein 3524828 7890384 GBP346_A3652 Burkholderia pseudomallei MSHR346 Redoxin superfamily protein YP_002898325.1 3524325 D 536230 CDS YP_002898326.1 237813875 7886947 3524929..3525867 1 NC_012695.1 identified by match to protein family HMM PF00294; kinase, PfkB family 3525867 7886947 GBP346_A3653 Burkholderia pseudomallei MSHR346 kinase, PfkB family YP_002898326.1 3524929 D 536230 CDS YP_002898327.1 237813876 7886858 3525891..3526364 1 NC_012695.1 identified by match to protein family HMM PF05433; outer membrane lipoprotein 3526364 7886858 GBP346_A3654 Burkholderia pseudomallei MSHR346 outer membrane lipoprotein YP_002898327.1 3525891 D 536230 CDS YP_002898328.1 237813877 7888714 complement(3526612..3527193) 1 NC_012695.1 histone protein 3527193 7888714 GBP346_A3655 Burkholderia pseudomallei MSHR346 histone protein YP_002898328.1 3526612 R 536230 CDS YP_002898329.1 237813878 7889594 3527215..3527334 1 NC_012695.1 hypothetical protein 3527334 7889594 GBP346_A3656 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898329.1 3527215 D 536230 CDS YP_002898330.1 237813879 7889105 complement(3527628..3528839) 1 NC_012695.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 3528839 7889105 GBP346_A3657 Burkholderia pseudomallei MSHR346 ribonucleotide-diphosphate reductase subunit beta YP_002898330.1 3527628 R 536230 CDS YP_002898331.1 237813880 7889953 complement(3529207..3532194) 1 NC_012695.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3532194 7889953 GBP346_A3658 Burkholderia pseudomallei MSHR346 ribonucleotide-diphosphate reductase subunit alpha YP_002898331.1 3529207 R 536230 CDS YP_002898332.1 237813881 7887875 3532219..3532500 1 NC_012695.1 hypothetical protein 3532500 7887875 GBP346_A3659 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898332.1 3532219 D 536230 CDS YP_002898333.1 237813882 7890192 complement(3532665..3533255) 1 NC_012695.1 identified by match to protein family HMM PF01510; N-acetyl-anhydromuranmyl-L-alanine amidase 3533255 7890192 GBP346_A3660 Burkholderia pseudomallei MSHR346 N-acetyl-anhydromuranmyl-L-alanine amidase YP_002898333.1 3532665 R 536230 CDS YP_002898334.1 237813883 7887368 complement(3533252..3533572) 1 NC_012695.1 hypothetical protein 3533572 7887368 GBP346_A3661 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898334.1 3533252 R 536230 CDS YP_002898335.1 237813884 7890701 complement(3533586..3534458) 1 NC_012695.1 identified by match to protein family HMM PF01578; cytochrome c assembly family protein 3534458 7890701 GBP346_A3662 Burkholderia pseudomallei MSHR346 cytochrome c assembly family protein YP_002898335.1 3533586 R 536230 CDS YP_002898336.1 237813885 7886865 3534573..3535940 1 NC_012695.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 3535940 ffh 7886865 ffh Burkholderia pseudomallei MSHR346 signal recognition particle protein YP_002898336.1 3534573 D 536230 CDS YP_002898337.1 237813886 7887406 3536038..3536589 1 NC_012695.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3536589 7887406 GBP346_A3664 Burkholderia pseudomallei MSHR346 hypoxanthine-guanine phosphoribosyltransferase YP_002898337.1 3536038 D 536230 CDS YP_002898338.1 237813887 7888469 3536679..3536792 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3536792 7888469 GBP346_A3666 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898338.1 3536679 D 536230 CDS YP_002898339.1 237813888 7888755 complement(3536780..3537382) 1 NC_012695.1 identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein 3537382 7888755 GBP346_A3665 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898339.1 3536780 R 536230 CDS YP_002898340.1 237813889 7887064 complement(3537414..3539150) 1 NC_012695.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3539150 proS 7887064 proS Burkholderia pseudomallei MSHR346 prolyl-tRNA synthetase YP_002898340.1 3537414 R 536230 CDS YP_002898341.1 237813890 7890882 3539369..3540019 1 NC_012695.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3540019 7890882 GBP346_A3668 Burkholderia pseudomallei MSHR346 dinucleoside polyphosphate hydrolase YP_002898341.1 3539369 D 536230 CDS YP_002898342.1 237813891 7889575 3540105..3540662 1 NC_012695.1 identified by match to protein family HMM PF08750; putative lipoprotein 3540662 7889575 GBP346_A3669 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898342.1 3540105 D 536230 CDS YP_002898343.1 237813892 7887301 complement(3540686..3540859) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3540859 7887301 GBP346_A3670 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898343.1 3540686 R 536230 CDS YP_002898344.1 237813893 7886714 complement(3540871..3541989) 1 NC_012695.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3541989 proB 7886714 proB Burkholderia pseudomallei MSHR346 gamma-glutamyl kinase YP_002898344.1 3540871 R 536230 CDS YP_002898345.1 237813894 7888094 complement(3542074..3543192) 1 NC_012695.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3543192 obgE 7888094 obgE Burkholderia pseudomallei MSHR346 GTPase ObgE YP_002898345.1 3542074 R 536230 CDS YP_002898346.1 237813895 7887203 3543182..3543316 1 NC_012695.1 hypothetical protein 3543316 7887203 GBP346_A3673 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898346.1 3543182 D 536230 CDS YP_002898347.1 237813896 7888998 complement(3543377..3543640) 1 NC_012695.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3543640 rpmA 7888998 rpmA Burkholderia pseudomallei MSHR346 50S ribosomal protein L27 YP_002898347.1 3543377 R 536230 CDS YP_002898348.1 237813897 7887658 complement(3543669..3543980) 1 NC_012695.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 3543980 rplU 7887658 rplU Burkholderia pseudomallei MSHR346 50S ribosomal protein L21 YP_002898348.1 3543669 R 536230 CDS YP_002898349.1 237813898 7887852 3544196..3545194 1 NC_012695.1 identified by match to protein family HMM PF00348; octaprenyl-diphosphate synthase 3545194 ispB 7887852 ispB Burkholderia pseudomallei MSHR346 octaprenyl-diphosphate synthase YP_002898349.1 3544196 D 536230 CDS YP_002898350.1 237813899 7889200 3545476..3546771 1 NC_012695.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS domain protein 3546771 7889200 GBP346_A3678 Burkholderia pseudomallei MSHR346 CBS domain protein YP_002898350.1 3545476 D 536230 CDS YP_002898351.1 237813900 7889015 3546907..3548130 1 NC_012695.1 identified by match to protein family HMM PF00437; type IV pilus assembly protein TapB 3548130 7889015 GBP346_A3679 Burkholderia pseudomallei MSHR346 type IV pilus assembly protein TapB YP_002898351.1 3546907 D 536230 CDS YP_002898352.1 237813901 7887656 3548127..3549344 1 NC_012695.1 identified by match to protein family HMM PF00482; type IV pilus biogenesis protein PilC 3549344 7887656 GBP346_A3680 Burkholderia pseudomallei MSHR346 type IV pilus biogenesis protein PilC YP_002898352.1 3548127 D 536230 CDS YP_002898353.1 237813902 7888291 3549389..3550303 1 NC_012695.1 identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV prepilin leader peptidase 3550303 pilD 7888291 pilD Burkholderia pseudomallei MSHR346 type IV prepilin leader peptidase YP_002898353.1 3549389 D 536230 CDS YP_002898354.1 237813903 7887596 3550307..3550918 1 NC_012695.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3550918 coaE 7887596 coaE Burkholderia pseudomallei MSHR346 dephospho-CoA kinase YP_002898354.1 3550307 D 536230 CDS YP_002898355.1 237813904 7886982 3551067..3551822 1 NC_012695.1 identified by match to protein family HMM PF07072; hypothetical protein 3551822 7886982 GBP346_A3683 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898355.1 3551067 D 536230 CDS YP_002898356.1 237813905 7888981 3551858..3552061 1 NC_012695.1 identified by match to protein family HMM PF03884; hypothetical protein 3552061 7888981 GBP346_A3684 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898356.1 3551858 D 536230 CDS YP_002898357.1 237813906 7890251 complement(3552197..3552646) 1 NC_012695.1 identified by match to protein family HMM PF00293; mutator MutT protein 3552646 7890251 GBP346_A3685 Burkholderia pseudomallei MSHR346 mutator MutT protein YP_002898357.1 3552197 R 536230 CDS YP_002898358.1 237813907 7887461 complement(3552643..3553512) 1 NC_012695.1 identified by match to protein family HMM PF05673; AAA ATPase superfamily 3553512 7887461 GBP346_A3686 Burkholderia pseudomallei MSHR346 AAA ATPase superfamily YP_002898358.1 3552643 R 536230 CDS YP_002898359.1 237813908 7890358 complement(3553533..3554924) 1 NC_012695.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 3554924 argJ 7890358 argJ Burkholderia pseudomallei MSHR346 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_002898359.1 3553533 R 536230 CDS YP_002898360.1 237813909 7889760 complement(3554926..3557721) 1 NC_012695.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 3557721 secA 7889760 secA Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecA YP_002898360.1 3554926 R 536230 CDS YP_002898361.1 237813910 7887923 3558120..3558455 1 NC_012695.1 hypothetical protein 3558455 7887923 GBP346_A3689 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898361.1 3558120 D 536230 CDS YP_002898362.1 237813911 7887030 3558421..3558900 1 NC_012695.1 hypothetical protein 3558900 7887030 GBP346_A3690 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898362.1 3558421 D 536230 CDS YP_002898363.1 237813912 7887914 complement(3559291..3560208) 1 NC_012695.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3560208 lpxC 7887914 lpxC Burkholderia pseudomallei MSHR346 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002898363.1 3559291 R 536230 CDS YP_002898364.1 237813913 7890919 complement(3560450..3561094) 1 NC_012695.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family protein 3561094 7890919 GBP346_A3692 Burkholderia pseudomallei MSHR346 AhpC/TSA family protein YP_002898364.1 3560450 R 536230 CDS YP_002898365.1 237813914 7889232 complement(3561142..3562338) 1 NC_012695.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 3562338 ftsZ 7889232 ftsZ Burkholderia pseudomallei MSHR346 cell division protein FtsZ YP_002898365.1 3561142 R 536230 CDS YP_002898366.1 237813915 7887466 complement(3562447..3563679) 1 NC_012695.1 identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 3563679 ftsA 7887466 ftsA Burkholderia pseudomallei MSHR346 cell division protein FtsA YP_002898366.1 3562447 R 536230 CDS YP_002898367.1 237813916 7889867 complement(3563706..3564458) 1 NC_012695.1 identified by match to protein family HMM PF03799; match to protein family HMM PF08478; cell division protein FtsQ 3564458 7889867 GBP346_A3695 Burkholderia pseudomallei MSHR346 cell division protein FtsQ YP_002898367.1 3563706 R 536230 CDS YP_002898368.1 237813917 7889303 complement(3564479..3565417) 1 NC_012695.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 3565417 ddl 7889303 ddl Burkholderia pseudomallei MSHR346 D-alanine--D-alanine ligase YP_002898368.1 3564479 R 536230 CDS YP_002898369.1 237813918 7887866 complement(3565419..3566816) 1 NC_012695.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3566816 murC 7887866 murC Burkholderia pseudomallei MSHR346 UDP-N-acetylmuramate--L-alanine ligase YP_002898369.1 3565419 R 536230 CDS YP_002898370.1 237813919 7889536 complement(3566813..3567916) 1 NC_012695.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 3567916 murG 7889536 murG Burkholderia pseudomallei MSHR346 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_002898370.1 3566813 R 536230 CDS YP_002898371.1 237813920 7888478 complement(3568038..3569330) 1 NC_012695.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW 3569330 ftsW 7888478 ftsW Burkholderia pseudomallei MSHR346 cell division protein FtsW YP_002898371.1 3568038 R 536230 CDS YP_002898372.1 237813921 7887238 complement(3569327..3570853) 1 NC_012695.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3570853 murD 7887238 murD Burkholderia pseudomallei MSHR346 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002898372.1 3569327 R 536230 CDS YP_002898373.1 237813922 7888764 complement(3570867..3572036) 1 NC_012695.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 3572036 mraY 7888764 mraY Burkholderia pseudomallei MSHR346 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002898373.1 3570867 R 536230 CDS YP_002898374.1 237813923 7886979 complement(3572051..3573457) 1 NC_012695.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 3573457 7886979 GBP346_A3702 Burkholderia pseudomallei MSHR346 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002898374.1 3572051 R 536230 CDS YP_002898375.1 237813924 7887744 complement(3573454..3574998) 1 NC_012695.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 3574998 murE 7887744 murE Burkholderia pseudomallei MSHR346 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002898375.1 3573454 R 536230 CDS YP_002898376.1 237813925 7890040 complement(3574995..3576839) 1 NC_012695.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 3576839 7890040 GBP346_A3704 Burkholderia pseudomallei MSHR346 penicillin-binding protein YP_002898376.1 3574995 R 536230 CDS YP_002898377.1 237813926 7889550 complement(3576836..3577165) 1 NC_012695.1 identified by match to protein family HMM PF04999; match to protein family HMM TIGR02209; cell division protein FtsL 3577165 ftsL 7889550 ftsL Burkholderia pseudomallei MSHR346 cell division protein FtsL YP_002898377.1 3576836 R 536230 CDS YP_002898378.1 237813927 7889946 complement(3577162..3578103) 1 NC_012695.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 3578103 mraW 7889946 mraW Burkholderia pseudomallei MSHR346 S-adenosyl-methyltransferase MraW YP_002898378.1 3577162 R 536230 CDS YP_002898379.1 237813928 7887584 complement(3578127..3578555) 1 NC_012695.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 3578555 mraZ 7887584 mraZ Burkholderia pseudomallei MSHR346 cell division protein MraZ YP_002898379.1 3578127 R 536230 CDS YP_002898380.1 237813929 7889478 complement(3578943..3579569) 1 NC_012695.1 putative ubiquinone biosynthesis protein homolog 3579569 7889478 GBP346_A3708 Burkholderia pseudomallei MSHR346 putative ubiquinone biosynthesis protein homolog YP_002898380.1 3578943 R 536230 CDS YP_002898381.1 237813930 7887480 3579850..3581010 1 NC_012695.1 identified by match to protein family HMM PF00267; putative outer membrane porin 3581010 7887480 GBP346_A3709 Burkholderia pseudomallei MSHR346 putative outer membrane porin YP_002898381.1 3579850 D 536230 CDS YP_002898382.1 237813931 7888316 complement(3581246..3582919) 1 NC_012695.1 activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase 3582919 7888316 GBP346_A3710 Burkholderia pseudomallei MSHR346 Long-chain-fatty-acid--CoA ligase YP_002898382.1 3581246 R 536230 CDS YP_002898383.1 237813932 7886698 complement(3583059..3585134) 1 NC_012695.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; molybdopterin oxidoreductase 3585134 7886698 GBP346_A3711 Burkholderia pseudomallei MSHR346 molybdopterin oxidoreductase YP_002898383.1 3583059 R 536230 CDS YP_002898384.1 237813933 7887266 3585093..3585221 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3585221 7887266 GBP346_A3712 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898384.1 3585093 D 536230 CDS YP_002898385.1 237813934 7887083 complement(3590945..3591061) 1 NC_012695.1 hypothetical protein 3591061 7887083 GBP346_A3717 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898385.1 3590945 R 536230 CDS YP_002898386.1 237813935 7888649 3591358..3591471 1 NC_012695.1 hypothetical protein 3591471 7888649 GBP346_A3719 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898386.1 3591358 D 536230 CDS YP_002898387.1 237813936 7886993 complement(3591458..3592252) 1 NC_012695.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3592252 7886993 GBP346_A3718 Burkholderia pseudomallei MSHR346 enoyl-CoA hydratase YP_002898387.1 3591458 R 536230 CDS YP_002898388.1 237813937 7886901 3592365..3594071 1 NC_012695.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR02288; phenylacetic acid degradation protein PaaN 3594071 paaN 7886901 paaN Burkholderia pseudomallei MSHR346 phenylacetic acid degradation protein PaaN YP_002898388.1 3592365 D 536230 CDS YP_002898389.1 237813938 7887300 3594145..3595362 1 NC_012695.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3595362 pcaF_1 7887300 pcaF_1 Burkholderia pseudomallei MSHR346 beta-ketoadipyl CoA thiolase YP_002898389.1 3594145 D 536230 CDS YP_002898390.1 237813939 7889994 3595458..3596249 1 NC_012695.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3596249 paaB 7889994 paaB Burkholderia pseudomallei MSHR346 enoyl-CoA hydratase YP_002898390.1 3595458 D 536230 CDS YP_002898391.1 237813940 7888957 3596335..3596727 1 NC_012695.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; match to protein family HMM TIGR02286; phenylacetic acid degradation protein PaaD 3596727 paaD 7888957 paaD Burkholderia pseudomallei MSHR346 phenylacetic acid degradation protein PaaD YP_002898391.1 3596335 D 536230 CDS YP_002898392.1 237813941 7887474 3596765..3598063 1 NC_012695.1 identified by match to protein family HMM TIGR02155; phenylacetate-CoA ligase 3598063 paaF 7887474 paaF Burkholderia pseudomallei MSHR346 phenylacetate-CoA ligase YP_002898392.1 3596765 D 536230 CDS YP_002898393.1 237813942 7887707 complement(3598391..3599668) 1 NC_012695.1 identified by match to protein family HMM PF03562; match to protein family HMM PF06725; membrane-bound lytic murein transglycosylase A 3599668 mltA 7887707 mltA Burkholderia pseudomallei MSHR346 membrane-bound lytic murein transglycosylase A YP_002898393.1 3598391 R 536230 CDS YP_002898394.1 237813943 7887085 complement(3599726..3600310) 1 NC_012695.1 protein associated with Co2+ and Mg2+ efflux; ApaG 3600310 apaG 7887085 apaG Burkholderia pseudomallei MSHR346 ApaG YP_002898394.1 3599726 R 536230 CDS YP_002898395.1 237813944 7889274 3600282..3600968 1 NC_012695.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3600968 rpe 7889274 rpe Burkholderia pseudomallei MSHR346 ribulose-phosphate 3-epimerase YP_002898395.1 3600282 D 536230 CDS YP_002898396.1 237813945 7887130 3600965..3601702 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 3601702 gph_2 7887130 gph_2 Burkholderia pseudomallei MSHR346 phosphoglycolate phosphatase YP_002898396.1 3600965 D 536230 CDS YP_002898397.1 237813946 7889416 3601990..3603558 1 NC_012695.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3603558 trpE 7889416 trpE Burkholderia pseudomallei MSHR346 anthranilate synthase component I YP_002898397.1 3601990 D 536230 CDS YP_002898398.1 237813947 7889444 3603572..3604162 1 NC_012695.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3604162 7889444 GBP346_A3731 Burkholderia pseudomallei MSHR346 anthranilate synthase component II YP_002898398.1 3603572 D 536230 CDS YP_002898399.1 237813948 7889354 3604180..3605211 1 NC_012695.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3605211 trpD 7889354 trpD Burkholderia pseudomallei MSHR346 anthranilate phosphoribosyltransferase YP_002898399.1 3604180 D 536230 CDS YP_002898400.1 237813949 7889017 3605274..3606059 1 NC_012695.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3606059 trpC 7889017 trpC Burkholderia pseudomallei MSHR346 indole-3-glycerol-phosphate synthase YP_002898400.1 3605274 D 536230 CDS YP_002898401.1 237813950 7888014 3606070..3606711 1 NC_012695.1 identified by match to protein family HMM PF01928; adenylate cyclase 3606711 7888014 GBP346_A3734 Burkholderia pseudomallei MSHR346 adenylate cyclase YP_002898401.1 3606070 D 536230 CDS YP_002898402.1 237813951 7888069 3606753..3607541 1 NC_012695.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3607541 ung 7888069 ung Burkholderia pseudomallei MSHR346 uracil-DNA glycosylase YP_002898402.1 3606753 D 536230 CDS YP_002898403.1 237813952 7887099 complement(3607742..3608455) 1 NC_012695.1 identified by match to protein family HMM PF02525; match to protein family HMM PF03358; fmn-dependent NADH-azoreductase (fmn-dependent nadh-azocompound oxidoreductase) (azo-dye reductase) 3608455 7887099 GBP346_A3736 Burkholderia pseudomallei MSHR346 fmn-dependent NADH-azoreductase (fmn-dependent nadh-azocompound oxidoreductase) (azo-dye reductase) YP_002898403.1 3607742 R 536230 CDS YP_002898404.1 237813953 7889392 complement(3608477..3610306) 1 NC_012695.1 identified by match to protein family HMM PF05299; family M61 unassigned peptidase 3610306 7889392 GBP346_A3737 Burkholderia pseudomallei MSHR346 family M61 unassigned peptidase YP_002898404.1 3608477 R 536230 CDS YP_002898405.1 237813954 7889348 complement(3610406..3611134) 1 NC_012695.1 probable thiol:disulfide interchange protein DsbC 3611134 7889348 GBP346_A3738 Burkholderia pseudomallei MSHR346 probable thiol:disulfide interchange protein DsbC YP_002898405.1 3610406 R 536230 CDS YP_002898406.1 237813955 7889349 complement(3611236..3612417) 1 NC_012695.1 identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; ubiquinone biosynthesis hydroxylase family protein 3612417 7889349 GBP346_A3739 Burkholderia pseudomallei MSHR346 ubiquinone biosynthesis hydroxylase family protein YP_002898406.1 3611236 R 536230 CDS YP_002898407.1 237813956 7889470 complement(3612464..3612640) 1 NC_012695.1 hypothetical protein 3612640 7889470 GBP346_A3740 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898407.1 3612464 R 536230 CDS YP_002898408.1 237813957 7887857 3612732..3612860 1 NC_012695.1 putative lipoprotein 3612860 7887857 GBP346_A3741 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898408.1 3612732 D 536230 CDS YP_002898409.1 237813958 7887286 3613365..3613691 1 NC_012695.1 hypothetical protein 3613691 7887286 GBP346_A3742 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898409.1 3613365 D 536230 CDS YP_002898410.1 237813959 7888870 3613796..3613909 1 NC_012695.1 hypothetical protein 3613909 7888870 GBP346_A3743 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898410.1 3613796 D 536230 CDS YP_002898411.1 237813960 7890668 3614041..3614169 1 NC_012695.1 hypothetical protein 3614169 7890668 GBP346_A3744 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898411.1 3614041 D 536230 CDS YP_002898412.1 237813961 7888745 3614193..3615287 1 NC_012695.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3615287 ychF 7888745 ychF Burkholderia pseudomallei MSHR346 GTP-dependent nucleic acid-binding protein EngD YP_002898412.1 3614193 D 536230 CDS YP_002898413.1 237813962 7890640 complement(3615398..3615679) 1 NC_012695.1 hypothetical protein 3615679 7890640 GBP346_A3746 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898413.1 3615398 R 536230 CDS YP_002898414.1 237813963 7887052 3615899..3616402 1 NC_012695.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3616402 7887052 GBP346_A3747 Burkholderia pseudomallei MSHR346 NADH dehydrogenase subunit B YP_002898414.1 3615899 D 536230 CDS YP_002898415.1 237813964 7887757 3616416..3617249 1 NC_012695.1 hypothetical protein 3617249 7887757 GBP346_A3748 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898415.1 3616416 D 536230 CDS YP_002898416.1 237813965 7890867 complement(3617321..3619084) 1 NC_012695.1 identified by match to protein family HMM PF00324; match to protein family HMM TIGR01773; gaba permease 3619084 gabP 7890867 gabP Burkholderia pseudomallei MSHR346 gaba permease YP_002898416.1 3617321 R 536230 CDS YP_002898417.1 237813966 7887305 complement(3619229..3619396) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3619396 7887305 GBP346_A3750 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898417.1 3619229 R 536230 CDS YP_002898418.1 237813967 7888890 complement(3619389..3619802) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3619802 7888890 GBP346_A3751 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898418.1 3619389 R 536230 CDS YP_002898419.1 237813968 7890197 3619818..3619931 1 NC_012695.1 hypothetical protein 3619931 7890197 GBP346_A3752 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898419.1 3619818 D 536230 CDS YP_002898420.1 237813969 7887356 complement(3619984..3620961) 1 NC_012695.1 identified by match to protein family HMM PF03009; match to protein family HMM TIGR01409; glycerophosphoryl diester phosphodiesterase family protein 3620961 7887356 GBP346_A3753 Burkholderia pseudomallei MSHR346 glycerophosphoryl diester phosphodiesterase family protein YP_002898420.1 3619984 R 536230 CDS YP_002898421.1 237813970 7887742 3621101..3621412 1 NC_012695.1 hypothetical protein 3621412 7887742 GBP346_A3754 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898421.1 3621101 D 536230 CDS YP_002898422.1 237813971 7890055 3621699..3623366 1 NC_012695.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3623366 7890055 GBP346_A3755 Burkholderia pseudomallei MSHR346 putative ABC transporter ATP-binding protein YP_002898422.1 3621699 D 536230 CDS YP_002898423.1 237813972 7889593 complement(3623697..3624320) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA 3624320 7889593 GBP346_A3756 Burkholderia pseudomallei MSHR346 HAD hydrolase, family IA YP_002898423.1 3623697 R 536230 CDS YP_002898424.1 237813973 7887039 complement(3624317..3624868) 1 NC_012695.1 identified by match to protein family HMM PF00857; isochorismatase family protein 3624868 7887039 GBP346_A3757 Burkholderia pseudomallei MSHR346 isochorismatase family protein YP_002898424.1 3624317 R 536230 CDS YP_002898425.1 237813974 7889908 complement(3624892..3625035) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3625035 7889908 GBP346_A3758 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898425.1 3624892 R 536230 CDS YP_002898426.1 237813975 7888280 complement(3625005..3626819) 1 NC_012695.1 identified by match to protein family HMM PF00557; match to protein family HMM PF01321; metallopeptidase, M24 family 3626819 7888280 GBP346_A3759 Burkholderia pseudomallei MSHR346 metallopeptidase, M24 family YP_002898426.1 3625005 R 536230 CDS YP_002898427.1 237813976 7889881 complement(3626838..3627092) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 3627092 7889881 GBP346_A3760 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898427.1 3626838 R 536230 CDS YP_002898428.1 237813977 7888317 complement(3627089..3627442) 1 NC_012695.1 hypothetical protein 3627442 7888317 GBP346_A3761 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898428.1 3627089 R 536230 CDS YP_002898429.1 237813978 7889475 3627441..3627674 1 NC_012695.1 hypothetical protein 3627674 7889475 GBP346_A3762 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898429.1 3627441 D 536230 CDS YP_002898430.1 237813979 7888780 3627686..3628990 1 NC_012695.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3628990 hemA 7888780 hemA Burkholderia pseudomallei MSHR346 glutamyl-tRNA reductase YP_002898430.1 3627686 D 536230 CDS YP_002898431.1 237813980 7889813 3629057..3630139 1 NC_012695.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3630139 prfA 7889813 prfA Burkholderia pseudomallei MSHR346 peptide chain release factor 1 YP_002898431.1 3629057 D 536230 CDS YP_002898432.1 237813981 7888250 3630183..3631040 1 NC_012695.1 identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534; protein-(glutamine-N5) methyltransferase, release factor-specific 3631040 hemK 7888250 hemK Burkholderia pseudomallei MSHR346 protein-(glutamine-N5) methyltransferase, release factor-specific YP_002898432.1 3630183 D 536230 CDS YP_002898433.1 237813982 7890717 3631120..3631428 1 NC_012695.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; putative glutaredoxin family protein 3631428 7890717 GBP346_A3766 Burkholderia pseudomallei MSHR346 putative glutaredoxin family protein YP_002898433.1 3631120 D 536230 CDS YP_002898434.1 237813983 7886953 3631443..3632039 1 NC_012695.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3632039 7886953 GBP346_A3767 Burkholderia pseudomallei MSHR346 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002898434.1 3631443 D 536230 CDS YP_002898435.1 237813984 7890242 3632323..3633111 1 NC_012695.1 identified by match to protein family HMM PF02900; 4,5-dopa dioxygenase extradiol 3633111 7890242 GBP346_A3768 Burkholderia pseudomallei MSHR346 4,5-dopa dioxygenase extradiol YP_002898435.1 3632323 D 536230 CDS YP_002898436.1 237813985 7888865 complement(3633600..3635201) 1 NC_012695.1 identified by match to protein family HMM PF00324; amino acid permease 3635201 7888865 GBP346_A3769 Burkholderia pseudomallei MSHR346 amino acid permease YP_002898436.1 3633600 R 536230 CDS YP_002898437.1 237813986 7888595 3635184..3635333 1 NC_012695.1 hypothetical protein 3635333 7888595 GBP346_A3770 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898437.1 3635184 D 536230 CDS YP_002898438.1 237813987 7887905 3635635..3635838 1 NC_012695.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain protein 3635838 7887905 GBP346_A3771 Burkholderia pseudomallei MSHR346 cold-shock DNA-binding domain protein YP_002898438.1 3635635 D 536230 CDS YP_002898439.1 237813988 7887036 complement(3636025..3637287) 1 NC_012695.1 putative chaperone protein homolog 3637287 7887036 GBP346_A3772 Burkholderia pseudomallei MSHR346 putative chaperone protein homolog YP_002898439.1 3636025 R 536230 CDS YP_002898440.1 237813989 7890097 complement(3637933..3638538) 1 NC_012695.1 identified by match to protein family HMM PF00881; nitroreductase family protein 3638538 7890097 GBP346_A3773 Burkholderia pseudomallei MSHR346 nitroreductase family protein YP_002898440.1 3637933 R 536230 CDS YP_002898441.1 237813990 7890081 3638500..3639075 1 NC_012695.1 hypothetical protein 3639075 7890081 GBP346_A3775 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898441.1 3638500 D 536230 CDS YP_002898442.1 237813991 7886850 complement(3639035..3640318) 1 NC_012695.1 identified by match to protein family HMM PF07690; transporter, major facilitator family 3640318 7886850 GBP346_A3774 Burkholderia pseudomallei MSHR346 transporter, major facilitator family YP_002898442.1 3639035 R 536230 CDS YP_002898443.1 237813992 7890525 3640477..3641121 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 3641121 7890525 GBP346_A3776 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002898443.1 3640477 D 536230 CDS YP_002898444.1 237813993 7889253 3641459..3642082 1 NC_012695.1 identified by match to protein family HMM PF07209; hypothetical protein 3642082 7889253 GBP346_A3777 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898444.1 3641459 D 536230 CDS YP_002898445.1 237813994 7888289 complement(3642167..3643063) 1 NC_012695.1 hypothetical protein 3643063 7888289 GBP346_A3778 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898445.1 3642167 R 536230 CDS YP_002898446.1 237813995 7890610 complement(3643191..3644327) 1 NC_012695.1 identified by match to protein family HMM PF05175; putative methyltransferase 3644327 7890610 GBP346_A3779 Burkholderia pseudomallei MSHR346 putative methyltransferase YP_002898446.1 3643191 R 536230 CDS YP_002898447.1 237813996 7888307 3644304..3644609 1 NC_012695.1 LigA 3644609 7888307 GBP346_A3780 Burkholderia pseudomallei MSHR346 LigA YP_002898447.1 3644304 D 536230 CDS YP_002898448.1 237813997 7890750 complement(3644684..3645802) 1 NC_012695.1 identified by match to protein family HMM PF01757; acyltransferase family protein 3645802 7890750 GBP346_A3781 Burkholderia pseudomallei MSHR346 acyltransferase family protein YP_002898448.1 3644684 R 536230 CDS YP_002898449.1 237813998 7889289 3645801..3646280 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3646280 7889289 GBP346_A3783 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898449.1 3645801 D 536230 CDS YP_002898450.1 237813999 7887882 complement(3646240..3646743) 1 NC_012695.1 putative lipoprotein 3646743 7887882 GBP346_A3782 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898450.1 3646240 R 536230 CDS YP_002898451.1 237814000 7889563 3646937..3647050 1 NC_012695.1 hypothetical protein 3647050 7889563 GBP346_A3784 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898451.1 3646937 D 536230 CDS YP_002898452.1 237814001 7887931 3647347..3649512 1 NC_012695.1 identified by match to protein family HMM PF01433; peptidase, M1 family 3649512 7887931 GBP346_A3786 Burkholderia pseudomallei MSHR346 peptidase, M1 family YP_002898452.1 3647347 D 536230 CDS YP_002898453.1 237814002 7890180 complement(3649470..3649730) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3649730 7890180 GBP346_A3785 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898453.1 3649470 R 536230 CDS YP_002898454.1 237814003 7888426 complement(3650137..3650298) 1 NC_012695.1 hypothetical protein 3650298 7888426 GBP346_A3787 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898454.1 3650137 R 536230 CDS YP_002898455.1 237814004 7887228 3650267..3650476 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3650476 7887228 GBP346_A3788 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898455.1 3650267 D 536230 CDS YP_002898456.1 237814005 7889055 3650535..3650804 1 NC_012695.1 hypothetical protein 3650804 7889055 GBP346_A3789 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898456.1 3650535 D 536230 CDS YP_002898457.1 237814006 7887589 3650907..3651137 1 NC_012695.1 hypothetical protein 3651137 7887589 GBP346_A3790 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898457.1 3650907 D 536230 CDS YP_002898458.1 237814007 7889661 complement(3651371..3651727) 1 NC_012695.1 hypothetical protein 3651727 7889661 GBP346_A3791 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898458.1 3651371 R 536230 CDS YP_002898459.1 237814008 7888326 3651753..3653021 1 NC_012695.1 identified by match to protein family HMM PF00529; auxiliary transport protein, membrane fusion protein family 3653021 7888326 GBP346_A3792 Burkholderia pseudomallei MSHR346 auxiliary transport protein, membrane fusion protein family YP_002898459.1 3651753 D 536230 CDS YP_002898460.1 237814009 7886810 3653036..3655297 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; putative toxin secretion ABC transporter, ATP-binding protein 3655297 7886810 GBP346_A3793 Burkholderia pseudomallei MSHR346 putative toxin secretion ABC transporter, ATP-binding protein YP_002898460.1 3653036 D 536230 CDS YP_002898461.1 237814010 7888489 3655294..3656742 1 NC_012695.1 identified by match to protein family HMM PF02321; type I secretion outer membrane protein, TolC family 3656742 7888489 GBP346_A3794 Burkholderia pseudomallei MSHR346 type I secretion outer membrane protein, TolC family YP_002898461.1 3655294 D 536230 CDS YP_002898462.1 237814011 7887520 3656727..3656876 1 NC_012695.1 hypothetical protein 3656876 7887520 GBP346_A3795 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898462.1 3656727 D 536230 CDS YP_002898463.1 237814012 7890006 complement(3656952..3657920) 1 NC_012695.1 hypothetical protein 3657920 7890006 GBP346_A3796 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898463.1 3656952 R 536230 CDS YP_002898464.1 237814013 7888659 3657932..3658897 1 NC_012695.1 identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase family protein 3658897 7888659 GBP346_A3797 Burkholderia pseudomallei MSHR346 D-alanyl-D-alanine carboxypeptidase family protein YP_002898464.1 3657932 D 536230 CDS YP_002898465.1 237814014 7888391 3658926..3659063 1 NC_012695.1 hypothetical protein 3659063 7888391 GBP346_A3798 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898465.1 3658926 D 536230 CDS YP_002898466.1 237814015 7889259 3659048..3659161 1 NC_012695.1 hypothetical protein 3659161 7889259 GBP346_A3799 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898466.1 3659048 D 536230 CDS YP_002898467.1 237814016 7887873 3659169..3663062 1 NC_012695.1 identified by match to protein family HMM PF06744; match to protein family HMM PF06761; match to protein family HMM TIGR03348; type VI secretion protein IcmF 3663062 icmF_1 7887873 icmF_1 Burkholderia pseudomallei MSHR346 type VI secretion protein IcmF YP_002898467.1 3659169 D 536230 CDS YP_002898468.1 237814017 7887932 3663059..3664048 1 NC_012695.1 identified by match to protein family HMM TIGR03373; type VI secretion-associated protein, family 3664048 7887932 GBP346_A3801 Burkholderia pseudomallei MSHR346 type VI secretion-associated protein, family YP_002898468.1 3663059 D 536230 CDS YP_002898469.1 237814018 7889651 3664053..3664985 1 NC_012695.1 identified by match to protein family HMM PF00691; OmpA family protein 3664985 7889651 GBP346_A3802 Burkholderia pseudomallei MSHR346 OmpA family protein YP_002898469.1 3664053 D 536230 CDS YP_002898470.1 237814019 7888961 complement(3665184..3666305) 1 NC_012695.1 identified by match to protein family HMM PF06812; match to protein family HMM TIGR03363; type VI secretion-associated protein, ImpA family 3666305 7888961 GBP346_A3803 Burkholderia pseudomallei MSHR346 type VI secretion-associated protein, ImpA family YP_002898470.1 3665184 R 536230 CDS YP_002898471.1 237814020 7888719 complement(3666395..3669064) 1 NC_012695.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345; type VI secretion ATPase, ClpV1 family 3669064 clpV_1 7888719 clpV_1 Burkholderia pseudomallei MSHR346 type VI secretion ATPase, ClpV1 family YP_002898471.1 3666395 R 536230 CDS YP_002898472.1 237814021 7887212 complement(3669098..3670198) 1 NC_012695.1 identified by match to protein family HMM PF06996; match to protein family HMM TIGR03347; type VI secretion protein, VC_A0110 family 3670198 7887212 GBP346_A3805 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002898472.1 3669098 R 536230 CDS YP_002898473.1 237814022 7888278 complement(3670162..3672000) 1 NC_012695.1 identified by match to protein family HMM PF05947; match to protein family HMM TIGR03359; type VI secretion protein, VC_A0110 family 3672000 vasA_3 7888278 vasA_3 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002898473.1 3670162 R 536230 CDS YP_002898474.1 237814023 7889747 complement(3672079..3672561) 1 NC_012695.1 identified by match to protein family HMM PF04965; match to protein family HMM TIGR03357; type VI secretion system lysozyme-related protein 3672561 7889747 GBP346_A3807 Burkholderia pseudomallei MSHR346 type VI secretion system lysozyme-related protein YP_002898474.1 3672079 R 536230 CDS YP_002898475.1 237814024 7888606 complement(3672619..3673122) 1 NC_012695.1 identified by match to protein family HMM PF05638; match to protein family HMM TIGR03344; type VI secretion system effector, Hcp1 family 3673122 7888606 GBP346_A3808 Burkholderia pseudomallei MSHR346 type VI secretion system effector, Hcp1 family YP_002898475.1 3672619 R 536230 CDS YP_002898476.1 237814025 7890104 complement(3673195..3674685) 1 NC_012695.1 identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355; type VI secretion protein, EvpB/family 3674685 7890104 GBP346_A3809 Burkholderia pseudomallei MSHR346 type VI secretion protein, EvpB/family YP_002898476.1 3673195 R 536230 CDS YP_002898477.1 237814026 7886977 complement(3674702..3675220) 1 NC_012695.1 identified by match to protein family HMM PF05591; match to protein family HMM TIGR03358; type VI secretion protein, VC_A0110 family 3675220 7886977 GBP346_A3810 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002898477.1 3674702 R 536230 CDS YP_002898478.1 237814027 7886830 complement(3675257..3675892) 1 NC_012695.1 identified by match to protein family HMM PF07719; tetratricopeptide repeat protein 3675892 7886830 GBP346_A3811 Burkholderia pseudomallei MSHR346 tetratricopeptide repeat protein YP_002898478.1 3675257 R 536230 CDS YP_002898479.1 237814028 7888833 complement(3675986..3676315) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3676315 7888833 GBP346_A3812 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898479.1 3675986 R 536230 CDS YP_002898480.1 237814029 7887243 3676316..3676918 1 NC_012695.1 identified by match to protein family HMM TIGR03352; type VI secretion lipoprotein, family 3676918 7887243 GBP346_A3813 Burkholderia pseudomallei MSHR346 type VI secretion lipoprotein, family YP_002898480.1 3676316 D 536230 CDS YP_002898481.1 237814030 7887345 3676967..3678373 1 NC_012695.1 identified by match to protein family HMM PF05936; match to protein family HMM TIGR03353; type VI secretion protein, VC_A0110 family 3678373 7887345 GBP346_A3814 Burkholderia pseudomallei MSHR346 type VI secretion protein, VC_A0110 family YP_002898481.1 3676967 D 536230 CDS YP_002898482.1 237814031 7890459 3678370..3679155 1 NC_012695.1 identified by match to protein family HMM TIGR03349; type IV / VI secretion system protein, DotU family 3679155 7890459 GBP346_A3815 Burkholderia pseudomallei MSHR346 type IV / VI secretion system protein, DotU family YP_002898482.1 3678370 D 536230 CDS YP_002898483.1 237814032 7888457 3679257..3679622 1 NC_012695.1 phage tail completion protein 3679622 7888457 GBP346_A3816 Burkholderia pseudomallei MSHR346 phage tail completion protein YP_002898483.1 3679257 D 536230 CDS YP_002898484.1 237814033 7887240 complement(3680712..3681128) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; DNA (cytosine-5-)-methyltransferase 3681128 7887240 GBP346_A3817 Burkholderia pseudomallei MSHR346 DNA (cytosine-5-)-methyltransferase YP_002898484.1 3680712 R 536230 CDS YP_002898485.1 237814034 7890354 complement(3681213..3681626) 1 NC_012695.1 identified by match to protein family HMM PF09684; match to protein family HMM TIGR01634; phage tail protein I 3681626 7890354 GBP346_A3818 Burkholderia pseudomallei MSHR346 phage tail protein I YP_002898485.1 3681213 R 536230 CDS YP_002898486.1 237814035 7890069 complement(3681619..3681945) 1 NC_012695.1 gp37, bacteriophage baseplate assembly protein J 3681945 7890069 GBP346_A3819 Burkholderia pseudomallei MSHR346 gp37, bacteriophage baseplate assembly protein J YP_002898486.1 3681619 R 536230 CDS YP_002898487.1 237814036 7889990 3682549..3682722 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3682722 7889990 GBP346_A3820 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898487.1 3682549 D 536230 CDS YP_002898488.1 237814037 7889625 3682719..3682838 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3682838 7889625 GBP346_A3821 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898488.1 3682719 D 536230 CDS YP_002898489.1 237814038 7889226 3683781..3683918 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3683918 7889226 GBP346_A3822 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898489.1 3683781 D 536230 CDS YP_002898490.1 237814039 7886951 complement(3685078..3685212) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3685212 7886951 GBP346_A3823 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898490.1 3685078 R 536230 CDS YP_002898491.1 237814040 7889341 3685243..3685557 1 NC_012695.1 identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683; probable addiction module killer protein 3685557 7889341 GBP346_A3824 Burkholderia pseudomallei MSHR346 probable addiction module killer protein YP_002898491.1 3685243 D 536230 CDS YP_002898492.1 237814041 7887147 3685554..3685916 1 NC_012695.1 identified by match to protein family HMM TIGR02684; probable addiction module antidote protein 3685916 7887147 GBP346_A3825 Burkholderia pseudomallei MSHR346 probable addiction module antidote protein YP_002898492.1 3685554 D 536230 CDS YP_002898493.1 237814042 7888767 complement(3685960..3687015) 1 NC_012695.1 identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540; phage portal protein, pbsx family 3687015 7888767 GBP346_A3826 Burkholderia pseudomallei MSHR346 phage portal protein, pbsx family YP_002898493.1 3685960 R 536230 CDS YP_002898494.1 237814043 7889678 complement(3687012..3687509) 1 NC_012695.1 terminase, large subunit 3687509 7889678 GBP346_A3827 Burkholderia pseudomallei MSHR346 terminase, large subunit YP_002898494.1 3687012 R 536230 CDS YP_002898495.1 237814044 7888230 3687319..3687558 1 NC_012695.1 phage integrase family protein 3687558 7888230 GBP346_A3828 Burkholderia pseudomallei MSHR346 phage integrase family protein YP_002898495.1 3687319 D 536230 CDS YP_002898496.1 237814045 7889207 complement(3687731..3688240) 1 NC_012695.1 identified by match to protein family HMM PF04386; ClpXP protease specificity-enhancing factor 3688240 sspB 7889207 sspB Burkholderia pseudomallei MSHR346 ClpXP protease specificity-enhancing factor YP_002898496.1 3687731 R 536230 CDS YP_002898497.1 237814046 7890842 complement(3688310..3688921) 1 NC_012695.1 identified by match to protein family HMM PF02798; stringent starvation protein A 3688921 7890842 GBP346_A3831 Burkholderia pseudomallei MSHR346 stringent starvation protein A YP_002898497.1 3688310 R 536230 CDS YP_002898498.1 237814047 7889429 complement(3689014..3689772) 1 NC_012695.1 identified by match to protein family HMM PF02167; ubiquinol-cytochrome c reductase, cytochrome c1 3689772 7889429 GBP346_A3832 Burkholderia pseudomallei MSHR346 ubiquinol-cytochrome c reductase, cytochrome c1 YP_002898498.1 3689014 R 536230 CDS YP_002898499.1 237814048 7890595 complement(3689795..3691177) 1 NC_012695.1 identified by match to protein family HMM PF00033; ubiquinol--Cytochrome c reductase, cytochrome b subunit 3691177 petB 7890595 petB Burkholderia pseudomallei MSHR346 ubiquinol--Cytochrome c reductase, cytochrome b subunit YP_002898499.1 3689795 R 536230 CDS YP_002898500.1 237814049 7889278 complement(3691178..3691798) 1 NC_012695.1 identified by match to protein family HMM PF00355; match to protein family HMM TIGR01416; ubiquinol-cytochrome c reductase, iron-sulfur subunit 3691798 petA 7889278 petA Burkholderia pseudomallei MSHR346 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_002898500.1 3691178 R 536230 CDS YP_002898501.1 237814050 7889718 complement(3692019..3692882) 1 NC_012695.1 hypothetical protein 3692882 7889718 GBP346_A3835 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898501.1 3692019 R 536230 CDS YP_002898502.1 237814051 7890337 3692787..3693995 1 NC_012695.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease DegQ 3693995 7890337 GBP346_A3836 Burkholderia pseudomallei MSHR346 protease DegQ YP_002898502.1 3692787 D 536230 CDS YP_002898503.1 237814052 7888445 3694097..3694219 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3694219 7888445 GBP346_A3837 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898503.1 3694097 D 536230 CDS YP_002898504.1 237814053 7887579 complement(3694339..3695121) 1 NC_012695.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; twin arginine-targeting protein translocase TatC 3695121 tatC 7887579 tatC Burkholderia pseudomallei MSHR346 twin arginine-targeting protein translocase TatC YP_002898504.1 3694339 R 536230 CDS YP_002898505.1 237814054 7888744 complement(3695160..3695687) 1 NC_012695.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01410; sec-independent translocase 3695687 tatB 7888744 tatB Burkholderia pseudomallei MSHR346 sec-independent translocase YP_002898505.1 3695160 R 536230 CDS YP_002898506.1 237814055 7887889 complement(3695714..3695947) 1 NC_012695.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3695947 tatA 7887889 tatA Burkholderia pseudomallei MSHR346 twin arginine translocase protein A YP_002898506.1 3695714 R 536230 CDS YP_002898507.1 237814056 7888903 complement(3696036..3696401) 1 NC_012695.1 identified by match to protein family HMM PF01230; HIT family protein 3696401 7888903 GBP346_A3841 Burkholderia pseudomallei MSHR346 HIT family protein YP_002898507.1 3696036 R 536230 CDS YP_002898508.1 237814057 7888636 complement(3696430..3696819) 1 NC_012695.1 membrane protein 3696819 7888636 GBP346_A3842 Burkholderia pseudomallei MSHR346 membrane protein YP_002898508.1 3696430 R 536230 CDS YP_002898509.1 237814058 7888751 complement(3696872..3697240) 1 NC_012695.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 3697240 hisE 7888751 hisE Burkholderia pseudomallei MSHR346 phosphoribosyl-ATP pyrophosphatase YP_002898509.1 3696872 R 536230 CDS YP_002898510.1 237814059 7887682 complement(3697237..3697650) 1 NC_012695.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3697650 hisI 7887682 hisI Burkholderia pseudomallei MSHR346 phosphoribosyl-AMP cyclohydrolase YP_002898510.1 3697237 R 536230 CDS YP_002898511.1 237814060 7889294 complement(3697650..3698438) 1 NC_012695.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3698438 hisF 7889294 hisF Burkholderia pseudomallei MSHR346 imidazole glycerol phosphate synthase subunit HisF YP_002898511.1 3697650 R 536230 CDS YP_002898512.1 237814061 7890722 complement(3698506..3699261) 1 NC_012695.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3699261 hisA 7890722 hisA Burkholderia pseudomallei MSHR346 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002898512.1 3698506 R 536230 CDS YP_002898513.1 237814062 7889719 complement(3699429..3700070) 1 NC_012695.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3700070 hisH 7889719 hisH Burkholderia pseudomallei MSHR346 imidazole glycerol phosphate synthase subunit HisH YP_002898513.1 3699429 R 536230 CDS YP_002898514.1 237814063 7890367 complement(3700067..3700687) 1 NC_012695.1 identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein 3700687 7890367 GBP346_A3848 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898514.1 3700067 R 536230 CDS YP_002898515.1 237814064 7887046 complement(3700743..3701330) 1 NC_012695.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3701330 hisB 7887046 hisB Burkholderia pseudomallei MSHR346 imidazoleglycerol-phosphate dehydratase YP_002898515.1 3700743 R 536230 CDS YP_002898516.1 237814065 7887884 complement(3701394..3702464) 1 NC_012695.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3702464 hisC_2 7887884 hisC_2 Burkholderia pseudomallei MSHR346 histidinol-phosphate aminotransferase YP_002898516.1 3701394 R 536230 CDS YP_002898517.1 237814066 7890077 complement(3702620..3703957) 1 NC_012695.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3703957 hisD 7890077 hisD Burkholderia pseudomallei MSHR346 histidinol dehydrogenase YP_002898517.1 3702620 R 536230 CDS YP_002898518.1 237814067 7888943 complement(3703999..3704655) 1 NC_012695.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 3704655 hisG 7888943 hisG Burkholderia pseudomallei MSHR346 ATP phosphoribosyltransferase catalytic subunit YP_002898518.1 3703999 R 536230 CDS YP_002898519.1 237814068 7890000 complement(3704652..3706001) 1 NC_012695.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3706001 murA 7890000 murA Burkholderia pseudomallei MSHR346 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002898519.1 3704652 R 536230 CDS YP_002898520.1 237814069 7890228 complement(3706015..3706254) 1 NC_012695.1 identified by match to protein family HMM PF01722; hypothetical protein 3706254 7890228 GBP346_A3854 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898520.1 3706015 R 536230 CDS YP_002898521.1 237814070 7889503 complement(3706340..3707095) 1 NC_012695.1 identified by match to protein family HMM PF01061; ABC-2 type transporter 3707095 7889503 GBP346_A3855 Burkholderia pseudomallei MSHR346 ABC-2 type transporter YP_002898521.1 3706340 R 536230 CDS YP_002898522.1 237814071 7889046 complement(3707092..3708018) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 3708018 7889046 GBP346_A3856 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002898522.1 3707092 R 536230 CDS YP_002898523.1 237814072 7889802 complement(3708314..3708583) 1 NC_012695.1 hypothetical protein 3708583 7889802 GBP346_A3857 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898523.1 3708314 R 536230 CDS YP_002898524.1 237814073 7890333 complement(3708580..3709212) 1 NC_012695.1 identified by match to protein family HMM PF05494; toluene tolerance protein 3709212 7890333 GBP346_A3858 Burkholderia pseudomallei MSHR346 toluene tolerance protein YP_002898524.1 3708580 R 536230 CDS YP_002898525.1 237814074 7888083 complement(3709327..3710337) 1 NC_012695.1 identified by match to protein family HMM PF04333; lipoprotein, VacJ family 3710337 7888083 GBP346_A3859 Burkholderia pseudomallei MSHR346 lipoprotein, VacJ family YP_002898525.1 3709327 R 536230 CDS YP_002898526.1 237814075 7890736 complement(3710334..3710885) 1 NC_012695.1 identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein 3710885 7890736 GBP346_A3860 Burkholderia pseudomallei MSHR346 ABC transporter, periplasmic substrate-binding protein YP_002898526.1 3710334 R 536230 CDS YP_002898527.1 237814076 7887073 complement(3710898..3711665) 1 NC_012695.1 identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; ABC transporter, permease protein 3711665 7887073 GBP346_A3861 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002898527.1 3710898 R 536230 CDS YP_002898528.1 237814077 7890402 complement(3711662..3712480) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 3712480 7890402 GBP346_A3862 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002898528.1 3711662 R 536230 CDS YP_002898529.1 237814078 7887426 complement(3712580..3713683) 1 NC_012695.1 identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 3713683 7887426 GBP346_A3863 Burkholderia pseudomallei MSHR346 thiamine-phosphate diphosphorylase YP_002898529.1 3712580 R 536230 CDS YP_002898530.1 237814079 7888746 complement(3713680..3714495) 1 NC_012695.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3714495 thiG 7888746 thiG Burkholderia pseudomallei MSHR346 thiazole synthase YP_002898530.1 3713680 R 536230 CDS YP_002898531.1 237814080 7890720 complement(3714548..3714745) 1 NC_012695.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 3714745 thiS 7890720 thiS Burkholderia pseudomallei MSHR346 sulfur carrier protein ThiS YP_002898531.1 3714548 R 536230 CDS YP_002898532.1 237814081 7888488 complement(3714794..3715927) 1 NC_012695.1 identified by match to protein family HMM PF01266; glycine oxidase ThiO 3715927 7888488 GBP346_A3866 Burkholderia pseudomallei MSHR346 glycine oxidase ThiO YP_002898532.1 3714794 R 536230 CDS YP_002898533.1 237814082 7887209 complement(3715924..3716055) 1 NC_012695.1 hypothetical protein 3716055 7887209 GBP346_A3867 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898533.1 3715924 R 536230 CDS YP_002898534.1 237814083 7889287 3716114..3716533 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; ABC transporter, ATP-binding protein 3716533 7889287 GBP346_A3869 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002898534.1 3716114 D 536230 CDS YP_002898535.1 237814084 7888248 3716476..3718296 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF05992; match to protein family HMM PF06472; ABC transporter, permease/ATP-binding protein 3718296 7888248 GBP346_A3870 Burkholderia pseudomallei MSHR346 ABC transporter, permease/ATP-binding protein YP_002898535.1 3716476 D 536230 CDS YP_002898536.1 237814085 7889688 3718286..3718486 1 NC_012695.1 hypothetical protein 3718486 7889688 GBP346_A3871 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898536.1 3718286 D 536230 CDS YP_002898537.1 237814086 7887444 complement(3718535..3719095) 1 NC_012695.1 identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase 3719095 7887444 GBP346_A3872 Burkholderia pseudomallei MSHR346 2'-5' RNA ligase YP_002898537.1 3718535 R 536230 CDS YP_002898538.1 237814087 7889258 complement(3719092..3720603) 1 NC_012695.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino-acid carrier protein AlsT 3720603 7889258 GBP346_A3873 Burkholderia pseudomallei MSHR346 amino-acid carrier protein AlsT YP_002898538.1 3719092 R 536230 CDS YP_002898539.1 237814088 7887042 complement(3720884..3722350) 1 NC_012695.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3722350 gltD 7887042 gltD Burkholderia pseudomallei MSHR346 glutamate synthase subunit beta YP_002898539.1 3720884 R 536230 CDS YP_002898540.1 237814089 7888840 complement(3722444..3727147) 1 NC_012695.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 3727147 gltB 7888840 gltB Burkholderia pseudomallei MSHR346 glutamate synthase, large subunit YP_002898540.1 3722444 R 536230 CDS YP_002898541.1 237814090 7889702 complement(3727438..3728151) 1 NC_012695.1 identified by match to protein family HMM PF07605; transposase or inactivated derivative 3728151 7889702 GBP346_A3876 Burkholderia pseudomallei MSHR346 transposase or inactivated derivative YP_002898541.1 3727438 R 536230 CDS YP_002898542.1 237814091 7890346 3728344..3729075 1 NC_012695.1 identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 3729075 7890346 GBP346_A3877 Burkholderia pseudomallei MSHR346 outer membrane protein, OmpW family YP_002898542.1 3728344 D 536230 CDS YP_002898543.1 237814092 7888063 complement(3729221..3729982) 1 NC_012695.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 3729982 ugpQ 7888063 ugpQ Burkholderia pseudomallei MSHR346 cytoplasmic glycerophosphodiester phosphodiesterase YP_002898543.1 3729221 R 536230 CDS YP_002898544.1 237814093 7887198 complement(3730027..3731109) 1 NC_012695.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 3731109 ugpC 7887198 ugpC Burkholderia pseudomallei MSHR346 glycerol-3-phosphate transporter ATP-binding subunit YP_002898544.1 3730027 R 536230 CDS YP_002898545.1 237814094 7888057 complement(3731135..3731980) 1 NC_012695.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 3731980 7888057 GBP346_A3880 Burkholderia pseudomallei MSHR346 glycerol-3-phosphate transporter membrane protein YP_002898545.1 3731135 R 536230 CDS YP_002898546.1 237814095 7890171 complement(3731977..3732945) 1 NC_012695.1 identified by match to protein family HMM PF00528; sn-glycerol-3-phosphate transport system permease protein UgpA 3732945 7890171 GBP346_A3881 Burkholderia pseudomallei MSHR346 sn-glycerol-3-phosphate transport system permease protein UgpA YP_002898546.1 3731977 R 536230 CDS YP_002898547.1 237814096 7887024 complement(3732992..3734317) 1 NC_012695.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 3734317 7887024 GBP346_A3882 Burkholderia pseudomallei MSHR346 glycerol-3-phosphate transporter periplasmic binding protein YP_002898547.1 3732992 R 536230 CDS YP_002898548.1 237814097 7888822 complement(3734402..3735634) 1 NC_012695.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 3735634 7888822 GBP346_A3883 Burkholderia pseudomallei MSHR346 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_002898548.1 3734402 R 536230 CDS YP_002898549.1 237814098 7886996 complement(3735683..3736762) 1 NC_012695.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3736762 aroB 7886996 aroB Burkholderia pseudomallei MSHR346 3-dehydroquinate synthase YP_002898549.1 3735683 R 536230 CDS YP_002898550.1 237814099 7888210 complement(3736759..3737388) 1 NC_012695.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3737388 aroK 7888210 aroK Burkholderia pseudomallei MSHR346 shikimate kinase YP_002898550.1 3736759 R 536230 CDS YP_002898551.1 237814100 7890048 complement(3737394..3739052) 1 NC_012695.1 identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515; type IV pilus secretin PilQ 3739052 pilQ 7890048 pilQ Burkholderia pseudomallei MSHR346 type IV pilus secretin PilQ YP_002898551.1 3737394 R 536230 CDS YP_002898552.1 237814101 7890098 complement(3739118..3740077) 1 NC_012695.1 hypothetical protein 3740077 7890098 GBP346_A3887 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898552.1 3739118 R 536230 CDS YP_002898553.1 237814102 7887620 complement(3740074..3740742) 1 NC_012695.1 identified by match to protein family HMM PF05137; putative PilN protein 3740742 7887620 GBP346_A3888 Burkholderia pseudomallei MSHR346 putative PilN protein YP_002898553.1 3740074 R 536230 CDS YP_002898554.1 237814103 7889989 complement(3740751..3741698) 1 NC_012695.1 hypothetical protein 3741698 7889989 GBP346_A3889 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898554.1 3740751 R 536230 CDS YP_002898555.1 237814104 7889582 3742011..3744332 1 NC_012695.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A 3744332 7889582 GBP346_A3890 Burkholderia pseudomallei MSHR346 penicillin-binding protein 1A YP_002898555.1 3742011 D 536230 CDS YP_002898556.1 237814105 7889127 complement(3744448..3744774) 1 NC_012695.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 3744774 cyaY 7889127 cyaY Burkholderia pseudomallei MSHR346 frataxin-like protein YP_002898556.1 3744448 R 536230 CDS YP_002898557.1 237814106 7887535 3744811..3745095 1 NC_012695.1 putative lipoprotein 3745095 7887535 GBP346_A3892 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898557.1 3744811 D 536230 CDS YP_002898558.1 237814107 7889705 3745106..3746377 1 NC_012695.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 3746377 lysA 7889705 lysA Burkholderia pseudomallei MSHR346 diaminopimelate decarboxylase YP_002898558.1 3745106 D 536230 CDS YP_002898559.1 237814108 7890945 complement(3746454..3746597) 1 NC_012695.1 hypothetical protein 3746597 7890945 GBP346_A3894 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898559.1 3746454 R 536230 CDS YP_002898560.1 237814109 7889615 complement(3746630..3747355) 1 NC_012695.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 3747355 7889615 GBP346_A3895 Burkholderia pseudomallei MSHR346 putative sulfite oxidase subunit YedZ YP_002898560.1 3746630 R 536230 CDS YP_002898561.1 237814110 7887687 complement(3747365..3748360) 1 NC_012695.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 3748360 7887687 GBP346_A3896 Burkholderia pseudomallei MSHR346 putative sulfite oxidase subunit YedY YP_002898561.1 3747365 R 536230 CDS YP_002898562.1 237814111 7890794 complement(3748538..3749728) 1 NC_012695.1 identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144; cytochrome c assembly protein 3749728 7890794 GBP346_A3897 Burkholderia pseudomallei MSHR346 cytochrome c assembly protein YP_002898562.1 3748538 R 536230 CDS YP_002898563.1 237814112 7886706 complement(3749733..3751910) 1 NC_012695.1 identified by match to protein family HMM PF05140; cytochrome c assembly family protein 3751910 7886706 GBP346_A3898 Burkholderia pseudomallei MSHR346 cytochrome c assembly family protein YP_002898563.1 3749733 R 536230 CDS YP_002898564.1 237814113 7889581 complement(3752041..3752625) 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 3752625 7889581 GBP346_A3899 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002898564.1 3752041 R 536230 CDS YP_002898565.1 237814114 7888024 3752905..3753564 1 NC_012695.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3753564 engB 7888024 engB Burkholderia pseudomallei MSHR346 ribosome biogenesis GTP-binding protein YsxC YP_002898565.1 3752905 D 536230 CDS YP_002898566.1 237814115 7890512 3753758..3754846 1 NC_012695.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3754846 hemB 7890512 hemB Burkholderia pseudomallei MSHR346 delta-aminolevulinic acid dehydratase YP_002898566.1 3753758 D 536230 CDS YP_002898567.1 237814116 7887018 complement(3755062..3756945) 1 NC_012695.1 identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD (Protein-disulfide reductase) (Disulfide reductase) 3756945 7887018 GBP346_A3902 Burkholderia pseudomallei MSHR346 thiol:disulfide interchange protein DsbD (Protein-disulfide reductase) (Disulfide reductase) YP_002898567.1 3755062 R 536230 CDS YP_002898568.1 237814117 7890383 complement(3756938..3757288) 1 NC_012695.1 identified by match to protein family HMM PF03091; periplasmic divalent cation tolerance protein 3757288 7890383 GBP346_A3903 Burkholderia pseudomallei MSHR346 periplasmic divalent cation tolerance protein YP_002898568.1 3756938 R 536230 CDS YP_002898569.1 237814118 7888270 complement(3757423..3757818) 1 NC_012695.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3757818 rplQ 7888270 rplQ Burkholderia pseudomallei MSHR346 50S ribosomal protein L17 YP_002898569.1 3757423 R 536230 CDS YP_002898570.1 237814119 7889810 complement(3757959..3758936) 1 NC_012695.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3758936 rpoA 7889810 rpoA Burkholderia pseudomallei MSHR346 DNA-directed RNA polymerase subunit alpha YP_002898570.1 3757959 R 536230 CDS YP_002898571.1 237814120 7887168 complement(3759064..3759687) 1 NC_012695.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 3759687 rpsD 7887168 rpsD Burkholderia pseudomallei MSHR346 30S ribosomal protein S4 YP_002898571.1 3759064 R 536230 CDS YP_002898572.1 237814121 7890718 complement(3759838..3760239) 1 NC_012695.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3760239 rpsK 7890718 rpsK Burkholderia pseudomallei MSHR346 30S ribosomal protein S11 YP_002898572.1 3759838 R 536230 CDS YP_002898573.1 237814122 7887798 complement(3760263..3760628) 1 NC_012695.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3760628 rpsM 7887798 rpsM Burkholderia pseudomallei MSHR346 30S ribosomal protein S13 YP_002898573.1 3760263 R 536230 CDS YP_002898574.1 237814123 7889686 complement(3760667..3760783) 1 NC_012695.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 3760783 rpmJ 7889686 rpmJ Burkholderia pseudomallei MSHR346 50S ribosomal protein L36 YP_002898574.1 3760667 R 536230 CDS YP_002898575.1 237814124 7890382 complement(3760804..3761022) 1 NC_012695.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 3761022 infA 7890382 infA Burkholderia pseudomallei MSHR346 translation initiation factor IF-1 YP_002898575.1 3760804 R 536230 CDS YP_002898576.1 237814125 7890007 complement(3761032..3762378) 1 NC_012695.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3762378 secY 7890007 secY Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecY YP_002898576.1 3761032 R 536230 CDS YP_002898577.1 237814126 7888314 complement(3762423..3762857) 1 NC_012695.1 late assembly protein; 50S ribosomal protein L15 3762857 rplO 7888314 rplO Burkholderia pseudomallei MSHR346 50S ribosomal protein L15 YP_002898577.1 3762423 R 536230 CDS YP_002898578.1 237814127 7887491 complement(3762886..3763068) 1 NC_012695.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3763068 rpmD 7887491 rpmD Burkholderia pseudomallei MSHR346 50S ribosomal protein L30 YP_002898578.1 3762886 R 536230 CDS YP_002898579.1 237814128 7887001 complement(3763084..3763602) 1 NC_012695.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3763602 rpsE 7887001 rpsE Burkholderia pseudomallei MSHR346 30S ribosomal protein S5 YP_002898579.1 3763084 R 536230 CDS YP_002898580.1 237814129 7889839 complement(3763616..3763981) 1 NC_012695.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3763981 rplR 7889839 rplR Burkholderia pseudomallei MSHR346 50S ribosomal protein L18 YP_002898580.1 3763616 R 536230 CDS YP_002898581.1 237814130 7888267 complement(3763994..3764524) 1 NC_012695.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3764524 rplF 7888267 rplF Burkholderia pseudomallei MSHR346 50S ribosomal protein L6 YP_002898581.1 3763994 R 536230 CDS YP_002898582.1 237814131 7889687 complement(3764545..3764940) 1 NC_012695.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3764940 rpsH 7889687 rpsH Burkholderia pseudomallei MSHR346 30S ribosomal protein S8 YP_002898582.1 3764545 R 536230 CDS YP_002898583.1 237814132 7889628 complement(3764955..3765260) 1 NC_012695.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3765260 rpsN 7889628 rpsN Burkholderia pseudomallei MSHR346 30S ribosomal protein S14 YP_002898583.1 3764955 R 536230 CDS YP_002898584.1 237814133 7889646 complement(3765268..3765807) 1 NC_012695.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3765807 rplE 7889646 rplE Burkholderia pseudomallei MSHR346 50S ribosomal protein L5 YP_002898584.1 3765268 R 536230 CDS YP_002898585.1 237814134 7889073 complement(3765825..3766133) 1 NC_012695.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3766133 rplX 7889073 rplX Burkholderia pseudomallei MSHR346 50S ribosomal protein L24 YP_002898585.1 3765825 R 536230 CDS YP_002898586.1 237814135 7888685 complement(3766143..3766511) 1 NC_012695.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3766511 rplN 7888685 rplN Burkholderia pseudomallei MSHR346 50S ribosomal protein L14 YP_002898586.1 3766143 R 536230 CDS YP_002898587.1 237814136 7889145 complement(3766821..3767093) 1 NC_012695.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3767093 rpsQ 7889145 rpsQ Burkholderia pseudomallei MSHR346 30S ribosomal protein S17 YP_002898587.1 3766821 R 536230 CDS YP_002898588.1 237814137 7886832 complement(3767090..3767284) 1 NC_012695.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3767284 rpmC 7886832 rpmC Burkholderia pseudomallei MSHR346 50S ribosomal protein L29 YP_002898588.1 3767090 R 536230 CDS YP_002898589.1 237814138 7886902 complement(3767294..3767710) 1 NC_012695.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3767710 rplP 7886902 rplP Burkholderia pseudomallei MSHR346 50S ribosomal protein L16 YP_002898589.1 3767294 R 536230 CDS YP_002898590.1 237814139 7889102 complement(3767713..3768513) 1 NC_012695.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3768513 rpsC 7889102 rpsC Burkholderia pseudomallei MSHR346 30S ribosomal protein S3 YP_002898590.1 3767713 R 536230 CDS YP_002898591.1 237814140 7890160 complement(3768525..3768854) 1 NC_012695.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3768854 rplV 7890160 rplV Burkholderia pseudomallei MSHR346 50S ribosomal protein L22 YP_002898591.1 3768525 R 536230 CDS YP_002898592.1 237814141 7890232 complement(3768867..3769142) 1 NC_012695.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3769142 rpsS 7890232 rpsS Burkholderia pseudomallei MSHR346 30S ribosomal protein S19 YP_002898592.1 3768867 R 536230 CDS YP_002898593.1 237814142 7888798 complement(3769153..3769980) 1 NC_012695.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 3769980 rplB 7888798 rplB Burkholderia pseudomallei MSHR346 50S ribosomal protein L2 YP_002898593.1 3769153 R 536230 CDS YP_002898594.1 237814143 7889065 complement(3769983..3770297) 1 NC_012695.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3770297 rplW 7889065 rplW Burkholderia pseudomallei MSHR346 50S ribosomal protein L23 YP_002898594.1 3769983 R 536230 CDS YP_002898595.1 237814144 7888683 complement(3770294..3770914) 1 NC_012695.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3770914 rplD 7888683 rplD Burkholderia pseudomallei MSHR346 50S ribosomal protein L4 YP_002898595.1 3770294 R 536230 CDS YP_002898596.1 237814145 7889051 complement(3770914..3771585) 1 NC_012695.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3771585 rplC 7889051 rplC Burkholderia pseudomallei MSHR346 50S ribosomal protein L3 YP_002898596.1 3770914 R 536230 CDS YP_002898597.1 237814146 7887622 complement(3771761..3772072) 1 NC_012695.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3772072 rpsJ 7887622 rpsJ Burkholderia pseudomallei MSHR346 30S ribosomal protein S10 YP_002898597.1 3771761 R 536230 CDS YP_002898598.1 237814147 7888392 complement(3772225..3773415) 1 NC_012695.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3773415 tuf_1 7888392 tuf_1 Burkholderia pseudomallei MSHR346 elongation factor Tu YP_002898598.1 3772225 R 536230 CDS YP_002898599.1 237814148 7888006 complement(3773457..3775559) 1 NC_012695.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3775559 fusA_2 7888006 fusA_2 Burkholderia pseudomallei MSHR346 elongation factor G YP_002898599.1 3773457 R 536230 CDS YP_002898600.1 237814149 7889771 complement(3775681..3776151) 1 NC_012695.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 3776151 rpsG 7889771 rpsG Burkholderia pseudomallei MSHR346 30S ribosomal protein S7 YP_002898600.1 3775681 R 536230 CDS YP_002898601.1 237814150 7887114 complement(3776322..3776702) 1 NC_012695.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 3776702 rpsL 7887114 rpsL Burkholderia pseudomallei MSHR346 30S ribosomal protein S12 YP_002898601.1 3776322 R 536230 CDS YP_002898602.1 237814151 7890658 3776685..3776798 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3776798 7890658 GBP346_A3937 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898602.1 3776685 D 536230 CDS YP_002898603.1 237814152 7890607 complement(3776918..3778765) 1 NC_012695.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 3778765 recQ 7890607 recQ Burkholderia pseudomallei MSHR346 ATP-dependent DNA helicase RecQ YP_002898603.1 3776918 R 536230 CDS YP_002898604.1 237814153 7890521 3778805..3778951 1 NC_012695.1 hypothetical protein 3778951 7890521 GBP346_A3939 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898604.1 3778805 D 536230 CDS YP_002898605.1 237814154 7890843 3778983..3780203 1 NC_012695.1 identified by match to protein family HMM PF01610; transposase 3780203 7890843 GBP346_A3940 Burkholderia pseudomallei MSHR346 transposase YP_002898605.1 3778983 D 536230 CDS YP_002898606.1 237814155 7890656 complement(3780279..3784517) 1 NC_012695.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 3784517 rpoC 7890656 rpoC Burkholderia pseudomallei MSHR346 DNA-directed RNA polymerase subunit beta' YP_002898606.1 3780279 R 536230 CDS YP_002898607.1 237814156 7886862 complement(3784539..3788645) 1 NC_012695.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 3788645 rpoB 7886862 rpoB Burkholderia pseudomallei MSHR346 DNA-directed RNA polymerase subunit beta YP_002898607.1 3784539 R 536230 CDS YP_002898608.1 237814157 7889602 complement(3789009..3789383) 1 NC_012695.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 3789383 rplL 7889602 rplL Burkholderia pseudomallei MSHR346 50S ribosomal protein L7/L12 YP_002898608.1 3789009 R 536230 CDS YP_002898609.1 237814158 7889110 complement(3789447..3790001) 1 NC_012695.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 3790001 rplJ 7889110 rplJ Burkholderia pseudomallei MSHR346 50S ribosomal protein L10 YP_002898609.1 3789447 R 536230 CDS YP_002898610.1 237814159 7887758 complement(3790242..3790940) 1 NC_012695.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 3790940 rplA 7887758 rplA Burkholderia pseudomallei MSHR346 50S ribosomal protein L1 YP_002898610.1 3790242 R 536230 CDS YP_002898611.1 237814160 7887817 complement(3790941..3791372) 1 NC_012695.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 3791372 rplK 7887817 rplK Burkholderia pseudomallei MSHR346 50S ribosomal protein L11 YP_002898611.1 3790941 R 536230 CDS YP_002898612.1 237814161 7887354 complement(3791518..3792075) 1 NC_012695.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 3792075 nusG 7887354 nusG Burkholderia pseudomallei MSHR346 transcription antitermination protein NusG YP_002898612.1 3791518 R 536230 CDS YP_002898613.1 237814162 7887601 complement(3792077..3792457) 1 NC_012695.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 3792457 secE 7887601 secE Burkholderia pseudomallei MSHR346 preprotein translocase subunit SecE YP_002898613.1 3792077 R 536230 CDS YP_002898614.1 237814163 7889211 complement(3792635..3793825) 1 NC_012695.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3793825 tuf_2 7889211 tuf_2 Burkholderia pseudomallei MSHR346 elongation factor Tu YP_002898614.1 3792635 R 536230 CDS YP_002898615.1 237814164 7889181 3794226..3794354 1 NC_012695.1 hypothetical protein 3794354 7889181 GBP346_A3955 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898615.1 3794226 D 536230 CDS YP_002898616.1 237814165 7888439 complement(3794348..3794461) 1 NC_012695.1 hypothetical protein 3794461 7888439 GBP346_A3954 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898616.1 3794348 R 536230 CDS YP_002898617.1 237814166 7887082 complement(3800363..3800479) 1 NC_012695.1 hypothetical protein 3800479 7887082 GBP346_A3960 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898617.1 3800363 R 536230 CDS YP_002898618.1 237814167 7887955 complement(3800846..3802123) 1 NC_012695.1 identified by match to protein family HMM PF00657; lipolytic enzyme, G-D-S-L 3802123 7887955 GBP346_A3961 Burkholderia pseudomallei MSHR346 lipolytic enzyme, G-D-S-L YP_002898618.1 3800846 R 536230 CDS YP_002898619.1 237814168 7889738 3802773..3803771 1 NC_012695.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3803771 paaA 7889738 paaA Burkholderia pseudomallei MSHR346 phenylacetate-CoA oxygenase subunit PaaA YP_002898619.1 3802773 D 536230 CDS YP_002898620.1 237814169 7888493 3803777..3804118 1 NC_012695.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3804118 paaB 7888493 paaB Burkholderia pseudomallei MSHR346 phenylacetate-CoA oxygenase subunit PaaB YP_002898620.1 3803777 D 536230 CDS YP_002898621.1 237814170 7887218 3804129..3804932 1 NC_012695.1 identified by match to protein family HMM PF05138; match to protein family HMM TIGR02158; phenylacetate-CoA oxygenase, PaaI subunit 3804932 paaI 7887218 paaI Burkholderia pseudomallei MSHR346 phenylacetate-CoA oxygenase, PaaI subunit YP_002898621.1 3804129 D 536230 CDS YP_002898622.1 237814171 7888724 3804968..3805588 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01883; match to protein family HMM TIGR02159; phenylacetate-CoA oxygenase, PaaJ subunit 3805588 paaJ 7888724 paaJ Burkholderia pseudomallei MSHR346 phenylacetate-CoA oxygenase, PaaJ subunit YP_002898622.1 3804968 D 536230 CDS YP_002898623.1 237814172 7890620 3805590..3806678 1 NC_012695.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR02160; phenylacetate-CoA oxygenase/reductase, PaaK subunit 3806678 paaK 7890620 paaK Burkholderia pseudomallei MSHR346 phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_002898623.1 3805590 D 536230 CDS YP_002898624.1 237814173 7888442 3806815..3807630 1 NC_012695.1 identified by match to protein family HMM PF08874; hypothetical protein 3807630 7888442 GBP346_A3967 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898624.1 3806815 D 536230 CDS YP_002898625.1 237814174 7887810 3807657..3808256 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 3808256 7887810 GBP346_A3968 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002898625.1 3807657 D 536230 CDS YP_002898626.1 237814175 7889877 3808499..3809146 1 NC_012695.1 identified by match to protein family HMM PF00583; acetyltransferase, gnat family 3809146 7889877 GBP346_A3969 Burkholderia pseudomallei MSHR346 acetyltransferase, gnat family YP_002898626.1 3808499 D 536230 CDS YP_002898627.1 237814176 7888523 complement(3809265..3809843) 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 3809843 7888523 GBP346_A3970 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002898627.1 3809265 R 536230 CDS YP_002898628.1 237814177 7890122 3809932..3811029 1 NC_012695.1 4-hydroxyphenylpyruvate dioxygenase 3811029 hppD 7890122 hppD Burkholderia pseudomallei MSHR346 4-hydroxyphenylpyruvate dioxygenase YP_002898628.1 3809932 D 536230 CDS YP_002898629.1 237814178 7890038 complement(3811265..3811462) 1 NC_012695.1 hypothetical protein 3811462 7890038 GBP346_A3972 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898629.1 3811265 R 536230 CDS YP_002898630.1 237814179 7887959 3811782..3815363 1 NC_012695.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3815363 7887959 GBP346_A3973 Burkholderia pseudomallei MSHR346 indolepyruvate ferredoxin oxidoreductase YP_002898630.1 3811782 D 536230 CDS YP_002898631.1 237814180 7889021 3815360..3815512 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; 6-phosphofructokinase 3815512 7889021 GBP346_A3974 Burkholderia pseudomallei MSHR346 6-phosphofructokinase YP_002898631.1 3815360 D 536230 CDS YP_002898632.1 237814181 7890426 complement(3815897..3818167) 1 NC_012695.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3818167 7890426 GBP346_A3975 Burkholderia pseudomallei MSHR346 malic enzyme YP_002898632.1 3815897 R 536230 CDS YP_002898633.1 237814182 7889140 complement(3818352..3818597) 1 NC_012695.1 hypothetical protein 3818597 7889140 GBP346_A3976 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898633.1 3818352 R 536230 CDS YP_002898634.1 237814183 7888013 3818697..3819383 1 NC_012695.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3819383 pyrE 7888013 pyrE Burkholderia pseudomallei MSHR346 orotate phosphoribosyltransferase YP_002898634.1 3818697 D 536230 CDS YP_002898635.1 237814184 7886782 3819706..3820281 1 NC_012695.1 identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 3820281 7886782 GBP346_A3978 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898635.1 3819706 D 536230 CDS YP_002898636.1 237814185 7887663 complement(3820382..3820651) 1 NC_012695.1 hypothetical protein 3820651 7887663 GBP346_A3979 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898636.1 3820382 R 536230 CDS YP_002898637.1 237814186 7889997 3820667..3821242 1 NC_012695.1 identified by match to protein family HMM PF00258; putative flavodoxin 3821242 7889997 GBP346_A3980 Burkholderia pseudomallei MSHR346 putative flavodoxin YP_002898637.1 3820667 D 536230 CDS YP_002898638.1 237814187 7890415 3821395..3822339 1 NC_012695.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3822339 argC 7890415 argC Burkholderia pseudomallei MSHR346 N-acetyl-gamma-glutamyl-phosphate reductase YP_002898638.1 3821395 D 536230 CDS YP_002898639.1 237814188 7888393 3822356..3822484 1 NC_012695.1 hypothetical protein 3822484 7888393 GBP346_A3982 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898639.1 3822356 D 536230 CDS YP_002898640.1 237814189 7887289 3822886..3824187 1 NC_012695.1 hypothetical protein 3824187 7887289 GBP346_A3983 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898640.1 3822886 D 536230 CDS YP_002898641.1 237814190 7889837 3824313..3825563 1 NC_012695.1 putative lipoprotein 3825563 7889837 GBP346_A3984 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898641.1 3824313 D 536230 CDS YP_002898642.1 237814191 7890776 3825583..3826413 1 NC_012695.1 identified by match to protein family HMM PF03922; outer membrane protein, OmpW family 3826413 7890776 GBP346_A3985 Burkholderia pseudomallei MSHR346 outer membrane protein, OmpW family YP_002898642.1 3825583 D 536230 CDS YP_002898643.1 237814192 7886957 complement(3826601..3827539) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 3827539 7886957 GBP346_A3986 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898643.1 3826601 R 536230 CDS YP_002898644.1 237814193 7890609 3828165..3828860 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; MFS permease 3828860 7890609 GBP346_A3987 Burkholderia pseudomallei MSHR346 MFS permease YP_002898644.1 3828165 D 536230 CDS YP_002898645.1 237814194 7888729 complement(3828951..3829619) 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 3829619 7888729 GBP346_A3988 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002898645.1 3828951 R 536230 CDS YP_002898646.1 237814195 7889546 complement(3829718..3830587) 1 NC_012695.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; dehydrogenase 3830587 7889546 GBP346_A3989 Burkholderia pseudomallei MSHR346 dehydrogenase YP_002898646.1 3829718 R 536230 CDS YP_002898647.1 237814196 7886705 3830714..3831469 1 NC_012695.1 identified by match to protein family HMM PF01927; hypothetical protein 3831469 7886705 GBP346_A3990 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898647.1 3830714 D 536230 CDS YP_002898648.1 237814197 7889634 complement(3831601..3831831) 1 NC_012695.1 hypothetical protein 3831831 7889634 GBP346_A3991 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898648.1 3831601 R 536230 CDS YP_002898649.1 237814198 7887678 complement(3831976..3832098) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3832098 7887678 GBP346_A3992 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898649.1 3831976 R 536230 CDS YP_002898650.1 237814199 7888321 complement(3832052..3832543) 1 NC_012695.1 hypothetical protein 3832543 7888321 GBP346_A3993 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898650.1 3832052 R 536230 CDS YP_002898651.1 237814200 7888933 3832497..3832712 1 NC_012695.1 hypothetical protein 3832712 7888933 GBP346_A3994 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898651.1 3832497 D 536230 CDS YP_002898652.1 237814201 7886983 3832795..3833292 1 NC_012695.1 hypothetical protein 3833292 7886983 GBP346_A3995 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898652.1 3832795 D 536230 CDS YP_002898653.1 237814202 7886923 complement(3834082..3834195) 1 NC_012695.1 hypothetical protein 3834195 7886923 GBP346_A3996 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898653.1 3834082 R 536230 CDS YP_002898654.1 237814203 7887865 complement(3834501..3834818) 1 NC_012695.1 hypothetical protein 3834818 7887865 GBP346_A3997 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898654.1 3834501 R 536230 CDS YP_002898655.1 237814204 7888578 3834787..3834900 1 NC_012695.1 hypothetical protein 3834900 7888578 GBP346_A3998 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898655.1 3834787 D 536230 CDS YP_002898656.1 237814205 7886909 complement(3835113..3835310) 1 NC_012695.1 hypothetical protein 3835310 7886909 GBP346_A3999 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898656.1 3835113 R 536230 CDS YP_002898657.1 237814206 7889151 3835333..3836739 1 NC_012695.1 identified by match to protein family HMM PF00324; proline-specific permease ProY 3836739 7889151 GBP346_A4000 Burkholderia pseudomallei MSHR346 proline-specific permease ProY YP_002898657.1 3835333 D 536230 CDS YP_002898658.1 237814207 7889192 complement(3837053..3837418) 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 3837418 7889192 GBP346_A4002 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002898658.1 3837053 R 536230 CDS YP_002898659.1 237814208 7887897 complement(3837415..3838215) 1 NC_012695.1 identified by match to protein family HMM PF04972; transport-associated protein 3838215 7887897 GBP346_A4003 Burkholderia pseudomallei MSHR346 transport-associated protein YP_002898659.1 3837415 R 536230 CDS YP_002898660.1 237814209 7889385 complement(3838234..3838812) 1 NC_012695.1 phosphoheptose isomerase 3838812 7889385 GBP346_A4004 Burkholderia pseudomallei MSHR346 phosphoheptose isomerase YP_002898660.1 3838234 R 536230 CDS YP_002898661.1 237814210 7888924 complement(3838935..3839417) 1 NC_012695.1 identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 3839417 7888924 GBP346_A4005 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898661.1 3838935 R 536230 CDS YP_002898662.1 237814211 7887105 3839416..3840300 1 NC_012695.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 3840300 7887105 GBP346_A4006 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898662.1 3839416 D 536230 CDS YP_002898663.1 237814212 7886860 complement(3840395..3841087) 1 NC_012695.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A family protein 3841087 7886860 GBP346_A4007 Burkholderia pseudomallei MSHR346 rare lipoprotein A family protein YP_002898663.1 3840395 R 536230 CDS YP_002898664.1 237814213 7887295 3841631..3842275 1 NC_012695.1 identified by match to protein family HMM PF00753; hydrolase 3842275 7887295 GBP346_A4008 Burkholderia pseudomallei MSHR346 hydrolase YP_002898664.1 3841631 D 536230 CDS YP_002898665.1 237814214 7887041 3842272..3842928 1 NC_012695.1 exonuclease 3842928 7887041 GBP346_A4009 Burkholderia pseudomallei MSHR346 exonuclease YP_002898665.1 3842272 D 536230 CDS YP_002898666.1 237814215 7890144 3843019..3843477 1 NC_012695.1 identified by match to protein family HMM PF01037; Bkd operon transcriptional regulator 3843477 7890144 GBP346_A4010 Burkholderia pseudomallei MSHR346 Bkd operon transcriptional regulator YP_002898666.1 3843019 D 536230 CDS YP_002898667.1 237814216 7888709 complement(3843656..3844846) 1 NC_012695.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 3844846 7888709 GBP346_A4011 Burkholderia pseudomallei MSHR346 cation efflux family protein YP_002898667.1 3843656 R 536230 CDS YP_002898668.1 237814217 7887685 3844837..3844992 1 NC_012695.1 hypothetical protein 3844992 7887685 GBP346_A4012 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898668.1 3844837 D 536230 CDS YP_002898669.1 237814218 7887599 complement(3845086..3845379) 1 NC_012695.1 identified by match to protein family HMM PF00816; H-NS histone family protein 3845379 7887599 GBP346_A4013 Burkholderia pseudomallei MSHR346 H-NS histone family protein YP_002898669.1 3845086 R 536230 CDS YP_002898670.1 237814219 7887564 complement(3845467..3845646) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3845646 7887564 GBP346_A4014 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898670.1 3845467 R 536230 CDS YP_002898671.1 237814220 7890787 complement(3845764..3846444) 1 NC_012695.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 3846444 7890787 GBP346_A4015 Burkholderia pseudomallei MSHR346 pyridoxamine 5'-phosphate oxidase family protein YP_002898671.1 3845764 R 536230 CDS YP_002898672.1 237814221 7889268 3846757..3847965 1 NC_012695.1 identified by match to protein family HMM PF07690; putative amino acid ABC transporter, permease protein 3847965 7889268 GBP346_A4016 Burkholderia pseudomallei MSHR346 putative amino acid ABC transporter, permease protein YP_002898672.1 3846757 D 536230 CDS YP_002898673.1 237814222 7890603 complement(3848155..3849297) 1 NC_012695.1 identified by match to protein family HMM PF01094; putative amino acid ABC transporter, periplasmic amino acid-binding protein 3849297 7890603 GBP346_A4017 Burkholderia pseudomallei MSHR346 putative amino acid ABC transporter, periplasmic amino acid-binding protein YP_002898673.1 3848155 R 536230 CDS YP_002898674.1 237814223 7888716 complement(3849753..3850853) 1 NC_012695.1 identified by match to protein family HMM PF03060; oxidoreductase, 2-nitropropane dioxygenase family 3850853 7888716 GBP346_A4018 Burkholderia pseudomallei MSHR346 oxidoreductase, 2-nitropropane dioxygenase family YP_002898674.1 3849753 R 536230 CDS YP_002898675.1 237814224 7887592 complement(3850850..3851116) 1 NC_012695.1 hypothetical protein 3851116 7887592 GBP346_A4019 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898675.1 3850850 R 536230 CDS YP_002898676.1 237814225 7889992 3851180..3851872 1 NC_012695.1 identified by match to protein family HMM PF01738; dienelactone hydrolase family protein 3851872 7889992 GBP346_A4020 Burkholderia pseudomallei MSHR346 dienelactone hydrolase family protein YP_002898676.1 3851180 D 536230 CDS YP_002898677.1 237814226 7887275 3851917..3853458 1 NC_012695.1 identified by match to protein family HMM PF01425; amidase family protein 3853458 7887275 GBP346_A4021 Burkholderia pseudomallei MSHR346 amidase family protein YP_002898677.1 3851917 D 536230 CDS YP_002898678.1 237814227 7887562 complement(3853648..3854478) 1 NC_012695.1 identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; methylenetetrahydrofolate reductase (NAD(P)H) 3854478 metF 7887562 metF Burkholderia pseudomallei MSHR346 methylenetetrahydrofolate reductase (NAD(P)H) YP_002898678.1 3853648 R 536230 CDS YP_002898679.1 237814228 7890445 complement(3854496..3854849) 1 NC_012695.1 identified by match to protein family HMM PF04020; hypothetical protein 3854849 7890445 GBP346_A4023 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898679.1 3854496 R 536230 CDS YP_002898680.1 237814229 7890799 complement(3855013..3856434) 1 NC_012695.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3856434 ahcY 7890799 ahcY Burkholderia pseudomallei MSHR346 S-adenosyl-L-homocysteine hydrolase YP_002898680.1 3855013 R 536230 CDS YP_002898681.1 237814230 7887404 3856399..3856623 1 NC_012695.1 hypothetical protein 3856623 7887404 GBP346_A4025 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898681.1 3856399 D 536230 CDS YP_002898682.1 237814231 7890227 complement(3856788..3857522) 1 NC_012695.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 3857522 fliA 7890227 fliA Burkholderia pseudomallei MSHR346 flagellar biosynthesis sigma factor YP_002898682.1 3856788 R 536230 CDS YP_002898683.1 237814232 7887763 complement(3857544..3858356) 1 NC_012695.1 flagellar biosynthesisprotein, FlhG 3858356 7887763 GBP346_A4027 Burkholderia pseudomallei MSHR346 flagellar biosynthesisprotein, FlhG YP_002898683.1 3857544 R 536230 CDS YP_002898684.1 237814233 7889519 complement(3858349..3860100) 1 NC_012695.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 3860100 flhF 7889519 flhF Burkholderia pseudomallei MSHR346 flagellar biosynthesis regulator FlhF YP_002898684.1 3858349 R 536230 CDS YP_002898685.1 237814234 7889532 complement(3860097..3862199) 1 NC_012695.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3862199 flhA 7889532 flhA Burkholderia pseudomallei MSHR346 flagellar biosynthesis protein FlhA YP_002898685.1 3860097 R 536230 CDS YP_002898686.1 237814235 7888372 complement(3862196..3863401) 1 NC_012695.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3863401 flhB 7888372 flhB Burkholderia pseudomallei MSHR346 flagellar biosynthesis protein FlhB YP_002898686.1 3862196 R 536230 CDS YP_002898687.1 237814236 7890462 complement(3864094..3864594) 1 NC_012695.1 identified by match to protein family HMM PF06983; 3-demethylubiquinone-9 3-methyltransferase family protein 3864594 7890462 GBP346_A4031 Burkholderia pseudomallei MSHR346 3-demethylubiquinone-9 3-methyltransferase family protein YP_002898687.1 3864094 R 536230 CDS YP_002898688.1 237814237 7889070 complement(3864783..3866087) 1 NC_012695.1 putative lipoprotein 3866087 7889070 GBP346_A4032 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898688.1 3864783 R 536230 CDS YP_002898689.1 237814238 7889408 complement(3866110..3866613) 1 NC_012695.1 hypothetical protein 3866613 7889408 GBP346_A4033 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898689.1 3866110 R 536230 CDS YP_002898690.1 237814239 7890633 complement(3866811..3867521) 1 NC_012695.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 3867521 7890633 GBP346_A4034 Burkholderia pseudomallei MSHR346 chemotaxis regulator CheZ YP_002898690.1 3866811 R 536230 CDS YP_002898691.1 237814240 7889749 complement(3867541..3867936) 1 NC_012695.1 identified by match to protein family HMM PF00072; chemotaxis protein CheY 3867936 7889749 GBP346_A4035 Burkholderia pseudomallei MSHR346 chemotaxis protein CheY YP_002898691.1 3867541 R 536230 CDS YP_002898692.1 237814241 7887988 complement(3868285..3869379) 1 NC_012695.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3869379 7887988 GBP346_A4036 Burkholderia pseudomallei MSHR346 chemotaxis-specific methylesterase YP_002898692.1 3868285 R 536230 CDS YP_002898693.1 237814242 7888422 complement(3869385..3870089) 1 NC_012695.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 3870089 7888422 GBP346_A4037 Burkholderia pseudomallei MSHR346 chemoreceptor glutamine deamidase CheD YP_002898693.1 3869385 R 536230 CDS YP_002898694.1 237814243 7887945 complement(3870086..3871033) 1 NC_012695.1 identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase 3871033 7887945 GBP346_A4038 Burkholderia pseudomallei MSHR346 chemotaxis protein methyltransferase YP_002898694.1 3870086 R 536230 CDS YP_002898695.1 237814244 7890852 complement(3871037..3873040) 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) 3873040 7890852 GBP346_A4039 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein II (MCP-II) (Aspartatechemoreceptor protein) YP_002898695.1 3871037 R 536230 CDS YP_002898696.1 237814245 7890667 complement(3873081..3873608) 1 NC_012695.1 identified by match to protein family HMM PF01584; chemotaxis protein CheW 3873608 7890667 GBP346_A4040 Burkholderia pseudomallei MSHR346 chemotaxis protein CheW YP_002898696.1 3873081 R 536230 CDS YP_002898697.1 237814246 7888533 complement(3873639..3875954) 1 NC_012695.1 identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF09078; chemotaxis protein CheA 3875954 7888533 GBP346_A4041 Burkholderia pseudomallei MSHR346 chemotaxis protein CheA YP_002898697.1 3873639 R 536230 CDS YP_002898698.1 237814247 7889829 complement(3875986..3876366) 1 NC_012695.1 identified by match to protein family HMM PF00072; chemotaxis response regulator 3876366 7889829 GBP346_A4042 Burkholderia pseudomallei MSHR346 chemotaxis response regulator YP_002898698.1 3875986 R 536230 CDS YP_002898699.1 237814248 7888803 complement(3876397..3877419) 1 NC_012695.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 3877419 motB 7888803 motB Burkholderia pseudomallei MSHR346 flagellar motor protein MotB YP_002898699.1 3876397 R 536230 CDS YP_002898700.1 237814249 7889493 complement(3877436..3878296) 1 NC_012695.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3878296 7889493 GBP346_A4044 Burkholderia pseudomallei MSHR346 flagellar motor protein MotA YP_002898700.1 3877436 R 536230 CDS YP_002898701.1 237814250 7886797 complement(3878490..3879041) 1 NC_012695.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 3879041 7886797 GBP346_A4045 Burkholderia pseudomallei MSHR346 transcriptional activator FlhC YP_002898701.1 3878490 R 536230 CDS YP_002898702.1 237814251 7889085 complement(3879135..3879455) 1 NC_012695.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 3879455 7889085 GBP346_A4046 Burkholderia pseudomallei MSHR346 transcriptional activator FlhD YP_002898702.1 3879135 R 536230 CDS YP_002898703.1 237814252 7890646 3880048..3881112 1 NC_012695.1 identified by match to protein family HMM PF00534; glycosyl transferase, group 1 family 3881112 7890646 GBP346_A4047 Burkholderia pseudomallei MSHR346 glycosyl transferase, group 1 family YP_002898703.1 3880048 D 536230 CDS YP_002898704.1 237814253 7886726 complement(3881216..3881428) 1 NC_012695.1 H-NS histone family protein 3881428 7886726 GBP346_A4048 Burkholderia pseudomallei MSHR346 H-NS histone family protein YP_002898704.1 3881216 R 536230 CDS YP_002898705.1 237814254 7889772 3881411..3881617 1 NC_012695.1 hypothetical protein 3881617 7889772 GBP346_A4049 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898705.1 3881411 D 536230 CDS YP_002898706.1 237814255 7888838 3881584..3881709 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3881709 7888838 GBP346_A4050 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898706.1 3881584 D 536230 CDS YP_002898707.1 237814256 7888349 3881818..3882522 1 NC_012695.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 3882522 aqpZ 7888349 aqpZ Burkholderia pseudomallei MSHR346 aquaporin Z YP_002898707.1 3881818 D 536230 CDS YP_002898708.1 237814257 7889456 complement(3882711..3883532) 1 NC_012695.1 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD hydrolase, IIB family 3883532 7889456 GBP346_A4052 Burkholderia pseudomallei MSHR346 HAD hydrolase, IIB family YP_002898708.1 3882711 R 536230 CDS YP_002898709.1 237814258 7890190 complement(3883650..3884585) 1 NC_012695.1 identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase family protein 3884585 7890190 GBP346_A4053 Burkholderia pseudomallei MSHR346 BadF/BadG/BcrA/BcrD ATPase family protein YP_002898709.1 3883650 R 536230 CDS YP_002898710.1 237814259 7887363 3884691..3885299 1 NC_012695.1 identified by match to protein family HMM PF03352; DNA-3-methyladenine glycosylase 1 3885299 7887363 GBP346_A4054 Burkholderia pseudomallei MSHR346 DNA-3-methyladenine glycosylase 1 YP_002898710.1 3884691 D 536230 CDS YP_002898711.1 237814260 7887320 3885250..3885696 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3885696 7887320 GBP346_A4056 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898711.1 3885250 D 536230 CDS YP_002898712.1 237814261 7890447 complement(3885693..3885956) 1 NC_012695.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3885956 rpsU 7890447 rpsU Burkholderia pseudomallei MSHR346 30S ribosomal protein S21 YP_002898712.1 3885693 R 536230 CDS YP_002898713.1 237814262 7888861 3886463..3887629 1 NC_012695.1 structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 3887629 7888861 GBP346_A4057 Burkholderia pseudomallei MSHR346 flagellin YP_002898713.1 3886463 D 536230 CDS YP_002898714.1 237814263 7890861 3887779..3889299 1 NC_012695.1 identified by match to protein family HMM PF02465; match to protein family HMM PF07195; match to protein family HMM PF07196; flagellar hook-associated protein 3889299 7890861 GBP346_A4058 Burkholderia pseudomallei MSHR346 flagellar hook-associated protein YP_002898714.1 3887779 D 536230 CDS YP_002898715.1 237814264 7887733 3889313..3889627 1 NC_012695.1 hypothetical protein 3889627 7887733 GBP346_A4059 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898715.1 3889313 D 536230 CDS YP_002898716.1 237814265 7889365 3889851..3892181 1 NC_012695.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain protein 3892181 7889365 GBP346_A4060 Burkholderia pseudomallei MSHR346 TPR domain protein YP_002898716.1 3889851 D 536230 CDS YP_002898717.1 237814266 7890849 3892178..3893326 1 NC_012695.1 identified by match to protein family HMM PF01041; match to protein family HMM PF01212; aminotransferase, DegT/DnrJ/EryC1/StrS family 3893326 7890849 GBP346_A4061 Burkholderia pseudomallei MSHR346 aminotransferase, DegT/DnrJ/EryC1/StrS family YP_002898717.1 3892178 D 536230 CDS YP_002898718.1 237814267 7890201 3893323..3894357 1 NC_012695.1 identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3894357 7890201 GBP346_A4062 Burkholderia pseudomallei MSHR346 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002898718.1 3893323 D 536230 CDS YP_002898719.1 237814268 7888374 3894369..3894590 1 NC_012695.1 hypothetical protein 3894590 7888374 GBP346_A4063 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898719.1 3894369 D 536230 CDS YP_002898720.1 237814269 7887782 3894593..3895657 1 NC_012695.1 identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III 3895657 7887782 GBP346_A4064 Burkholderia pseudomallei MSHR346 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002898720.1 3894593 D 536230 CDS YP_002898721.1 237814270 7888180 3895660..3896418 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short chain dehydrogenase/reductase family 3896418 7888180 GBP346_A4065 Burkholderia pseudomallei MSHR346 oxidoreductase, short chain dehydrogenase/reductase family YP_002898721.1 3895660 D 536230 CDS YP_002898722.1 237814271 7889716 3896418..3897050 1 NC_012695.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR03570; hexapeptide transferase family protein 3897050 7889716 GBP346_A4066 Burkholderia pseudomallei MSHR346 hexapeptide transferase family protein YP_002898722.1 3896418 D 536230 CDS YP_002898723.1 237814272 7887409 3897052..3898116 1 NC_012695.1 identified by match to protein family HMM PF00355; Rieske (2Fe-2S) domain protein 3898116 7887409 GBP346_A4067 Burkholderia pseudomallei MSHR346 Rieske (2Fe-2S) domain protein YP_002898723.1 3897052 D 536230 CDS YP_002898724.1 237814273 7889091 complement(3898196..3899050) 1 NC_012695.1 hypothetical protein 3899050 7889091 GBP346_A4068 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898724.1 3898196 R 536230 CDS YP_002898725.1 237814274 7889692 complement(3899258..3900058) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3900058 7889692 GBP346_A4069 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898725.1 3899258 R 536230 CDS YP_002898726.1 237814275 7888839 3900076..3900189 1 NC_012695.1 hypothetical protein 3900189 7888839 GBP346_A4070 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898726.1 3900076 D 536230 CDS YP_002898727.1 237814276 7888227 3900226..3900849 1 NC_012695.1 identified by match to protein family HMM PF01810; translocator protein, LysE family 3900849 7888227 GBP346_A4071 Burkholderia pseudomallei MSHR346 translocator protein, LysE family YP_002898727.1 3900226 D 536230 CDS YP_002898728.1 237814277 7888394 complement(3901150..3902811) 1 NC_012695.1 identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409; match to protein family HMM TIGR03397; acid phosphatase AcpA 3902811 acpA_2 7888394 acpA_2 Burkholderia pseudomallei MSHR346 acid phosphatase AcpA YP_002898728.1 3901150 R 536230 CDS YP_002898729.1 237814278 7890782 complement(3902808..3903005) 1 NC_012695.1 hypothetical protein 3903005 7890782 GBP346_A4073 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898729.1 3902808 R 536230 CDS YP_002898730.1 237814279 7888888 complement(3903099..3903287) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3903287 7888888 GBP346_A4074 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898730.1 3903099 R 536230 CDS YP_002898731.1 237814280 7887371 complement(3903350..3904024) 1 NC_012695.1 identified by match to protein family HMM PF05643; lipoprotein 3904024 7887371 GBP346_A4075 Burkholderia pseudomallei MSHR346 lipoprotein YP_002898731.1 3903350 R 536230 CDS YP_002898732.1 237814281 7890312 complement(3904033..3904461) 1 NC_012695.1 lipoprotein 3904461 7890312 GBP346_A4076 Burkholderia pseudomallei MSHR346 lipoprotein YP_002898732.1 3904033 R 536230 CDS YP_002898733.1 237814282 7887903 complement(3904521..3905198) 1 NC_012695.1 identified by match to protein family HMM PF03783; CsgG family protein 3905198 7887903 GBP346_A4077 Burkholderia pseudomallei MSHR346 CsgG family protein YP_002898733.1 3904521 R 536230 CDS YP_002898734.1 237814283 7887736 3905229..3905345 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3905345 7887736 GBP346_A4078 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898734.1 3905229 D 536230 CDS YP_002898735.1 237814284 7890287 complement(3905416..3905820) 1 NC_012695.1 hypothetical protein 3905820 7890287 GBP346_A4079 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898735.1 3905416 R 536230 CDS YP_002898736.1 237814285 7889811 complement(3905828..3906214) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3906214 7889811 GBP346_A4080 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898736.1 3905828 R 536230 CDS YP_002898737.1 237814286 7888483 3906235..3907056 1 NC_012695.1 identified by match to protein family HMM PF00561; 3-oxoadipate enol-lactone hydrolase family protein 3907056 7888483 GBP346_A4081 Burkholderia pseudomallei MSHR346 3-oxoadipate enol-lactone hydrolase family protein YP_002898737.1 3906235 D 536230 CDS YP_002898738.1 237814287 7890734 complement(3907109..3908926) 1 NC_012695.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 3908926 7890734 GBP346_A4082 Burkholderia pseudomallei MSHR346 methyl-accepting chemotaxis protein YP_002898738.1 3907109 R 536230 CDS YP_002898739.1 237814288 7888304 complement(3909070..3909186) 1 NC_012695.1 hypothetical protein 3909186 7888304 GBP346_A4083 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898739.1 3909070 R 536230 CDS YP_002898740.1 237814289 7887413 complement(3909195..3910856) 1 NC_012695.1 identified by match to protein family HMM PF01565; match to protein family HMM PF08031; hexose oxidase 3910856 7887413 GBP346_A4084 Burkholderia pseudomallei MSHR346 hexose oxidase YP_002898740.1 3909195 R 536230 CDS YP_002898741.1 237814290 7888336 complement(3911045..3911689) 1 NC_012695.1 identified by match to protein family HMM PF03067; fibronectin type III domain protein/ chitin binding domain protein 3911689 7888336 GBP346_A4085 Burkholderia pseudomallei MSHR346 fibronectin type III domain protein/ chitin binding domain protein YP_002898741.1 3911045 R 536230 CDS YP_002898742.1 237814291 7887483 3912727..3912957 1 NC_012695.1 hypothetical protein 3912957 7887483 GBP346_A4086 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898742.1 3912727 D 536230 CDS YP_002898743.1 237814292 7889168 3913534..3914361 1 NC_012695.1 identified by match to protein family HMM PF00034; cytochrome c family protein 3914361 7889168 GBP346_A4088 Burkholderia pseudomallei MSHR346 cytochrome c family protein YP_002898743.1 3913534 D 536230 CDS YP_002898744.1 237814293 7888810 complement(3914681..3916768) 1 NC_012695.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase Rep 3916768 rep 7888810 rep Burkholderia pseudomallei MSHR346 ATP-dependent DNA helicase Rep YP_002898744.1 3914681 R 536230 CDS YP_002898745.1 237814294 7889741 3917066..3917860 1 NC_012695.1 hypothetical protein 3917860 7889741 GBP346_A4090 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898745.1 3917066 D 536230 CDS YP_002898746.1 237814295 7890305 3917926..3918633 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; lipolytic enzyme, G-D-S-L 3918633 7890305 GBP346_A4091 Burkholderia pseudomallei MSHR346 lipolytic enzyme, G-D-S-L YP_002898746.1 3917926 D 536230 CDS YP_002898747.1 237814296 7887720 complement(3918665..3918922) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; metallophosphoesterase 3918922 7887720 GBP346_A4092 Burkholderia pseudomallei MSHR346 metallophosphoesterase YP_002898747.1 3918665 R 536230 CDS YP_002898748.1 237814297 7889331 3919182..3920234 1 NC_012695.1 identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase family, NAD-binding Rossmann fold protein 3920234 7889331 GBP346_A4093 Burkholderia pseudomallei MSHR346 oxidoreductase family, NAD-binding Rossmann fold protein YP_002898748.1 3919182 D 536230 CDS YP_002898749.1 237814298 7887407 3920406..3920765 1 NC_012695.1 putative lipoprotein 3920765 7887407 GBP346_A4094 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898749.1 3920406 D 536230 CDS YP_002898750.1 237814299 7887640 complement(3921119..3921589) 1 NC_012695.1 hypothetical protein 3921589 7887640 GBP346_A4095 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898750.1 3921119 R 536230 CDS YP_002898751.1 237814300 7889675 3921473..3922669 1 NC_012695.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3922669 gcvT 7889675 gcvT Burkholderia pseudomallei MSHR346 glycine cleavage system aminomethyltransferase T YP_002898751.1 3921473 D 536230 CDS YP_002898752.1 237814301 7887944 3922763..3923143 1 NC_012695.1 identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein 3923143 gcvH 7887944 gcvH Burkholderia pseudomallei MSHR346 glycine cleavage system H protein YP_002898752.1 3922763 D 536230 CDS YP_002898753.1 237814302 7889693 3923644..3926571 1 NC_012695.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3926571 gcvP 7889693 gcvP Burkholderia pseudomallei MSHR346 glycine dehydrogenase YP_002898753.1 3923644 D 536230 CDS YP_002898754.1 237814303 7888471 complement(3926562..3926687) 1 NC_012695.1 hypothetical protein 3926687 7888471 GBP346_A4100 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898754.1 3926562 R 536230 CDS YP_002898755.1 237814304 7889566 3926723..3927841 1 NC_012695.1 hypothetical protein 3927841 7889566 GBP346_A4102 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898755.1 3926723 D 536230 CDS YP_002898756.1 237814305 7887484 3927875..3929263 1 NC_012695.1 identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 3929263 7887484 GBP346_A4103 Burkholderia pseudomallei MSHR346 L-serine ammonia-lyase YP_002898756.1 3927875 D 536230 CDS YP_002898757.1 237814306 7889370 complement(3929298..3930434) 1 NC_012695.1 hypothetical protein 3930434 7889370 GBP346_A4104 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898757.1 3929298 R 536230 CDS YP_002898758.1 237814307 7889442 3930707..3932410 1 NC_012695.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine pyrophosphate protein 3932410 7889442 GBP346_A4105 Burkholderia pseudomallei MSHR346 thiamine pyrophosphate protein YP_002898758.1 3930707 D 536230 CDS YP_002898759.1 237814308 7890450 3932439..3933506 1 NC_012695.1 hypothetical protein 3933506 7890450 GBP346_A4106 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898759.1 3932439 D 536230 CDS YP_002898760.1 237814309 7890584 complement(3933625..3934653) 1 NC_012695.1 identified by match to protein family HMM PF00165; ethanolamine operon transcriptional activator EutR 3934653 7890584 GBP346_A4107 Burkholderia pseudomallei MSHR346 ethanolamine operon transcriptional activator EutR YP_002898760.1 3933625 R 536230 CDS YP_002898761.1 237814310 7888573 3934850..3936469 1 NC_012695.1 identified by match to protein family HMM PF00171; acetaldehyde dehydrogenase 2 (acetaldehyde dehydrogenaseii) (acdh-ii) 3936469 7888573 GBP346_A4109 Burkholderia pseudomallei MSHR346 acetaldehyde dehydrogenase 2 (acetaldehyde dehydrogenaseii) (acdh-ii) YP_002898761.1 3934850 D 536230 CDS YP_002898762.1 237814311 7889088 complement(3936439..3936981) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3936981 7889088 GBP346_A4108 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898762.1 3936439 R 536230 CDS YP_002898763.1 237814312 7889010 complement(3937047..3937850) 1 NC_012695.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 3937850 eutC 7889010 eutC Burkholderia pseudomallei MSHR346 ethanolamine ammonia-lyase small subunit YP_002898763.1 3937047 R 536230 CDS YP_002898764.1 237814313 7890335 complement(3937847..3939244) 1 NC_012695.1 identified by match to protein family HMM PF06751; ethanolamine ammonia-lyase, large subunit 3939244 eutB 7890335 eutB Burkholderia pseudomallei MSHR346 ethanolamine ammonia-lyase, large subunit YP_002898764.1 3937847 R 536230 CDS YP_002898765.1 237814314 7889907 complement(3939301..3940710) 1 NC_012695.1 identified by match to protein family HMM PF00324; match to protein family HMM TIGR00908; ethanolamine permease 3940710 eat 7889907 eat Burkholderia pseudomallei MSHR346 ethanolamine permease YP_002898765.1 3939301 R 536230 CDS YP_002898766.1 237814315 7889703 complement(3940800..3941051) 1 NC_012695.1 hypothetical protein 3941051 7889703 GBP346_A4113 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898766.1 3940800 R 536230 CDS YP_002898767.1 237814316 7887968 3941328..3942506 1 NC_012695.1 identified by match to protein family HMM PF01757; putative acyltransferase 3942506 7887968 GBP346_A4114 Burkholderia pseudomallei MSHR346 putative acyltransferase YP_002898767.1 3941328 D 536230 CDS YP_002898768.1 237814317 7889526 3942546..3942728 1 NC_012695.1 transcriptional regulator, GntR family with aminotransferase domain 3942728 7889526 GBP346_A4115 Burkholderia pseudomallei MSHR346 transcriptional regulator, GntR family with aminotransferase domain YP_002898768.1 3942546 D 536230 CDS YP_002898769.1 237814318 7890339 complement(3942879..3944342) 1 NC_012695.1 identified by match to protein family HMM PF05552; conserved TM helix repeat-containing protein 3944342 7890339 GBP346_A4116 Burkholderia pseudomallei MSHR346 conserved TM helix repeat-containing protein YP_002898769.1 3942879 R 536230 CDS YP_002898770.1 237814319 7889958 complement(3944802..3945233) 1 NC_012695.1 hypothetical protein 3945233 7889958 GBP346_A4117 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898770.1 3944802 R 536230 CDS YP_002898771.1 237814320 7889281 complement(3945235..3945633) 1 NC_012695.1 hypothetical protein 3945633 7889281 GBP346_A4118 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898771.1 3945235 R 536230 CDS YP_002898772.1 237814321 7886743 complement(3945646..3948138) 1 NC_012695.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; heavy metal cation transport ATPase 3948138 7886743 GBP346_A4119 Burkholderia pseudomallei MSHR346 heavy metal cation transport ATPase YP_002898772.1 3945646 R 536230 CDS YP_002898773.1 237814322 7888748 3948221..3948652 1 NC_012695.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278; match to protein family HMM TIGR02047; Cd(II)/Pb(II)-responsive transcriptional regulator 3948652 cadR 7888748 cadR Burkholderia pseudomallei MSHR346 Cd(II)/Pb(II)-responsive transcriptional regulator YP_002898773.1 3948221 D 536230 CDS YP_002898774.1 237814323 7890340 3948752..3949393 1 NC_012695.1 identified by match to protein family HMM PF03551; transcriptional regulator, PadR family 3949393 7890340 GBP346_A4121 Burkholderia pseudomallei MSHR346 transcriptional regulator, PadR family YP_002898774.1 3948752 D 536230 CDS YP_002898775.1 237814324 7890084 complement(3949452..3949985) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02913; oxidoreductase 3949985 7890084 GBP346_A4122 Burkholderia pseudomallei MSHR346 oxidoreductase YP_002898775.1 3949452 R 536230 CDS YP_002898776.1 237814325 7890421 complement(3949589..3950032) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD linked oxidase 3950032 7890421 GBP346_A4123 Burkholderia pseudomallei MSHR346 FAD linked oxidase YP_002898776.1 3949589 R 536230 CDS YP_002898777.1 237814326 7887745 complement(3949990..3950292) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; FAD linked oxidase 3950292 7887745 GBP346_A4124 Burkholderia pseudomallei MSHR346 FAD linked oxidase YP_002898777.1 3949990 R 536230 CDS YP_002898778.1 237814327 7889500 complement(3950402..3951196) 1 NC_012695.1 identified by match to protein family HMM PF00497; lysine-arginine-ornithine-binding periplasmic protein 3951196 7889500 GBP346_A4125 Burkholderia pseudomallei MSHR346 lysine-arginine-ornithine-binding periplasmic protein YP_002898778.1 3950402 R 536230 CDS YP_002898779.1 237814328 7887437 complement(3951250..3952404) 1 NC_012695.1 catalyzes the transfer of an amino moiety; putative aminotransferase 3952404 7887437 GBP346_A4126 Burkholderia pseudomallei MSHR346 putative aminotransferase YP_002898779.1 3951250 R 536230 CDS YP_002898780.1 237814329 7890505 complement(3952507..3953292) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3953292 7890505 GBP346_A4127 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898780.1 3952507 R 536230 CDS YP_002898781.1 237814330 7888003 complement(3953355..3954131) 1 NC_012695.1 identified by match to protein family HMM PF00440; transcriptional regulator, TetR family 3954131 7888003 GBP346_A4128 Burkholderia pseudomallei MSHR346 transcriptional regulator, TetR family YP_002898781.1 3953355 R 536230 CDS YP_002898782.1 237814331 7888900 3954103..3955743 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; protein AidB 3955743 7888900 GBP346_A4129 Burkholderia pseudomallei MSHR346 protein AidB YP_002898782.1 3954103 D 536230 CDS YP_002898783.1 237814332 7890255 3955860..3957407 1 NC_012695.1 identified by match to protein family HMM PF00501; feruloyl-CoA synthetase 3957407 fcs 7890255 fcs Burkholderia pseudomallei MSHR346 feruloyl-CoA synthetase YP_002898783.1 3955860 D 536230 CDS YP_002898784.1 237814333 7886792 complement(3957647..3958786) 1 NC_012695.1 identified by match to protein family HMM PF01094; putative periplasmic substrate-binding protein 3958786 7886792 GBP346_A4131 Burkholderia pseudomallei MSHR346 putative periplasmic substrate-binding protein YP_002898784.1 3957647 R 536230 CDS YP_002898785.1 237814334 7888952 complement(3958871..3962800) 1 NC_012695.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3962800 putA 7888952 putA Burkholderia pseudomallei MSHR346 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_002898785.1 3958871 R 536230 CDS YP_002898786.1 237814335 7889572 3962813..3962989 1 NC_012695.1 hypothetical protein 3962989 7889572 GBP346_A4133 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898786.1 3962813 D 536230 CDS YP_002898787.1 237814336 7889228 3963099..3963254 1 NC_012695.1 hypothetical protein 3963254 7889228 GBP346_A4134 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898787.1 3963099 D 536230 CDS YP_002898788.1 237814337 7890644 complement(3963265..3965532) 1 NC_012695.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 3965532 priA 7890644 priA Burkholderia pseudomallei MSHR346 primosome assembly protein PriA YP_002898788.1 3963265 R 536230 CDS YP_002898789.1 237814338 7890499 complement(3965525..3965731) 1 NC_012695.1 hypothetical protein 3965731 7890499 GBP346_A4136 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898789.1 3965525 R 536230 CDS YP_002898790.1 237814339 7887441 complement(3965973..3967067) 1 NC_012695.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3967067 hemE 7887441 hemE Burkholderia pseudomallei MSHR346 uroporphyrinogen decarboxylase YP_002898790.1 3965973 R 536230 CDS YP_002898791.1 237814340 7886945 3967207..3967992 1 NC_012695.1 identified by match to protein family HMM PF00497; cyclohexadienyl dehydratase 3967992 7886945 GBP346_A4138 Burkholderia pseudomallei MSHR346 cyclohexadienyl dehydratase YP_002898791.1 3967207 D 536230 CDS YP_002898792.1 237814341 7888199 complement(3968198..3968539) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; CoA-binding protein 3968539 7888199 GBP346_A4139 Burkholderia pseudomallei MSHR346 CoA-binding protein YP_002898792.1 3968198 R 536230 CDS YP_002898793.1 237814342 7890045 complement(3968863..3969057) 1 NC_012695.1 hypothetical protein 3969057 7890045 GBP346_A4140 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898793.1 3968863 R 536230 CDS YP_002898794.1 237814343 7890115 complement(3969099..3970829) 1 NC_012695.1 identified by match to protein family HMM PF00501; AMP-binding domain protein 3970829 7890115 GBP346_A4141 Burkholderia pseudomallei MSHR346 AMP-binding domain protein YP_002898794.1 3969099 R 536230 CDS YP_002898795.1 237814344 7889049 complement(3971062..3971487) 1 NC_012695.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 3971487 atpC 7889049 atpC Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit epsilon YP_002898795.1 3971062 R 536230 CDS YP_002898796.1 237814345 7888067 complement(3971919..3973310) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3973310 atpD_1 7888067 atpD_1 Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit beta YP_002898796.1 3971919 R 536230 CDS YP_002898797.1 237814346 7888514 complement(3973390..3974265) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 3974265 atpG_1 7888514 atpG_1 Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit gamma YP_002898797.1 3973390 R 536230 CDS YP_002898798.1 237814347 7887843 complement(3974337..3975878) 1 NC_012695.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3975878 atpA_1 7887843 atpA_1 Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit alpha YP_002898798.1 3974337 R 536230 CDS YP_002898799.1 237814348 7890344 complement(3975925..3976464) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3976464 atpH 7890344 atpH Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit delta YP_002898799.1 3975925 R 536230 CDS YP_002898800.1 237814349 7888429 complement(3976467..3976937) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 3976937 atpF 7888429 atpF Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit B YP_002898800.1 3976467 R 536230 CDS YP_002898801.1 237814350 7888427 complement(3977065..3977334) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3977334 7888427 GBP346_A4148 Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit C YP_002898801.1 3977065 R 536230 CDS YP_002898802.1 237814351 7887581 complement(3977411..3978280) 1 NC_012695.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3978280 atpB_1 7887581 atpB_1 Burkholderia pseudomallei MSHR346 F0F1 ATP synthase subunit A YP_002898802.1 3977411 R 536230 CDS YP_002898803.1 237814352 7888720 complement(3978375..3978566) 1 NC_012695.1 ATP synthase I chain 3978566 7888720 GBP346_A4150 Burkholderia pseudomallei MSHR346 ATP synthase I chain YP_002898803.1 3978375 R 536230 CDS YP_002898804.1 237814353 7887401 3979057..3979185 1 NC_012695.1 hypothetical protein 3979185 7887401 GBP346_A4152 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898804.1 3979057 D 536230 CDS YP_002898805.1 237814354 7889798 complement(3979176..3980309) 1 NC_012695.1 citrate transporter 3980309 7889798 GBP346_A4151 Burkholderia pseudomallei MSHR346 citrate transporter YP_002898805.1 3979176 R 536230 CDS YP_002898806.1 237814355 7890833 complement(3980317..3981204) 1 NC_012695.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; chromosome segregation DNA-binding protein 3981204 7890833 GBP346_A4153 Burkholderia pseudomallei MSHR346 chromosome segregation DNA-binding protein YP_002898806.1 3980317 R 536230 CDS YP_002898807.1 237814356 7887856 complement(3981240..3982010) 1 NC_012695.1 identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj 3982010 7887856 GBP346_A4154 Burkholderia pseudomallei MSHR346 sporulation initiation inhibitor protein soj YP_002898807.1 3981240 R 536230 CDS YP_002898808.1 237814357 7888868 complement(3982063..3982704) 1 NC_012695.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3982704 gidB 7888868 gidB Burkholderia pseudomallei MSHR346 16S rRNA methyltransferase GidB YP_002898808.1 3982063 R 536230 CDS YP_002898809.1 237814358 7888626 complement(3982758..3984731) 1 NC_012695.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3984731 gidA 7888626 gidA Burkholderia pseudomallei MSHR346 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_002898809.1 3982758 R 536230 CDS YP_002898810.1 237814359 7890811 complement(3984893..3985648) 1 NC_012695.1 identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein 3985648 7890811 GBP346_A4157 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, ATP-binding protein YP_002898810.1 3984893 R 536230 CDS YP_002898811.1 237814360 7890574 complement(3985651..3987435) 1 NC_012695.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02653; ABC transporter, hydrophobic amino acid uptake transporter 3987435 7890574 GBP346_A4158 Burkholderia pseudomallei MSHR346 ABC transporter, hydrophobic amino acid uptake transporter YP_002898811.1 3985651 R 536230 CDS YP_002898812.1 237814361 7890157 complement(3987440..3988495) 1 NC_012695.1 identified by match to protein family HMM PF02653; putative amino acid uptake ABC transporter, permease protein 3988495 7890157 GBP346_A4159 Burkholderia pseudomallei MSHR346 putative amino acid uptake ABC transporter, permease protein YP_002898812.1 3987440 R 536230 CDS YP_002898813.1 237814362 7890279 complement(3988808..3989965) 1 NC_012695.1 identified by match to protein family HMM PF01094; branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 3989965 7890279 GBP346_A4160 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_002898813.1 3988808 R 536230 CDS YP_002898814.1 237814363 7890792 complement(3990233..3991639) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 3991639 7890792 GBP346_A4161 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898814.1 3990233 R 536230 CDS YP_002898815.1 237814364 7887920 complement(3991618..3991734) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3991734 7887920 GBP346_A4162 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898815.1 3991618 R 536230 CDS YP_002898816.1 237814365 7887250 complement(3991805..3991921) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 3991921 7887250 GBP346_A4163 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898816.1 3991805 R 536230 CDS YP_002898817.1 237814366 7889781 complement(3991953..3992459) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; branched-chain amino acid ABC transporter, permease protein 3992459 7889781 GBP346_A4164 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, permease protein YP_002898817.1 3991953 R 536230 CDS YP_002898818.1 237814367 7887942 complement(3992447..3992926) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; branched-chain amino acid ABC transporter, permease protein 3992926 7887942 GBP346_A4165 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, permease protein YP_002898818.1 3992447 R 536230 CDS YP_002898819.1 237814368 7888380 complement(3992926..3993810) 1 NC_012695.1 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter, permease protein 3993810 7888380 GBP346_A4166 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, permease protein YP_002898819.1 3992926 R 536230 CDS YP_002898820.1 237814369 7887730 complement(3993831..3993953) 1 NC_012695.1 hypothetical protein 3993953 7887730 GBP346_A4167 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898820.1 3993831 R 536230 CDS YP_002898821.1 237814370 7887898 complement(3993950..3995146) 1 NC_012695.1 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein 3995146 7887898 GBP346_A4168 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein YP_002898821.1 3993950 R 536230 CDS YP_002898822.1 237814371 7890612 complement(3995214..3995969) 1 NC_012695.1 identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein 3995969 7890612 GBP346_A4169 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, ATP-binding protein YP_002898822.1 3995214 R 536230 CDS YP_002898823.1 237814372 7888728 complement(3995966..3996745) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, hydrophobic amino acid uptake transporter 3996745 7888728 GBP346_A4170 Burkholderia pseudomallei MSHR346 ABC transporter, hydrophobic amino acid uptake transporter YP_002898823.1 3995966 R 536230 CDS YP_002898824.1 237814373 7888557 3996896..3997063 1 NC_012695.1 hypothetical protein 3997063 7888557 GBP346_A4171 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898824.1 3996896 D 536230 CDS YP_002898825.1 237814374 7890724 complement(3997245..3998930) 1 NC_012695.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; choline dehydrogenase, (CHD)(CDH) 3998930 7890724 GBP346_A4172 Burkholderia pseudomallei MSHR346 choline dehydrogenase, (CHD)(CDH) YP_002898825.1 3997245 R 536230 CDS YP_002898826.1 237814375 7888400 3998954..3999127 1 NC_012695.1 hypothetical protein 3999127 7888400 GBP346_A4174 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898826.1 3998954 D 536230 CDS YP_002898827.1 237814376 7888760 complement(3999105..4000631) 1 NC_012695.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase (acylating) 4000631 mmsA_1 7888760 mmsA_1 Burkholderia pseudomallei MSHR346 methylmalonate-semialdehyde dehydrogenase (acylating) YP_002898827.1 3999105 R 536230 CDS YP_002898828.1 237814377 7887948 4000614..4000730 1 NC_012695.1 hypothetical protein 4000730 7887948 GBP346_A4175 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898828.1 4000614 D 536230 CDS YP_002898829.1 237814378 7887425 4000772..4001671 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 4001671 7887425 GBP346_A4176 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898829.1 4000772 D 536230 CDS YP_002898830.1 237814379 7890728 4002064..4002594 1 NC_012695.1 identified by match to protein family HMM PF01928; adenylate cyclase 4002594 7890728 GBP346_A4177 Burkholderia pseudomallei MSHR346 adenylate cyclase YP_002898830.1 4002064 D 536230 CDS YP_002898831.1 237814380 7888968 complement(4002695..4003186) 1 NC_012695.1 identified by match to protein family HMM PF01037; transcriptional regulator, AsnC family 4003186 7888968 GBP346_A4178 Burkholderia pseudomallei MSHR346 transcriptional regulator, AsnC family YP_002898831.1 4002695 R 536230 CDS YP_002898832.1 237814381 7889125 4003330..4004223 1 NC_012695.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 4004223 phhA 7889125 phhA Burkholderia pseudomallei MSHR346 phenylalanine 4-monooxygenase YP_002898832.1 4003330 D 536230 CDS YP_002898833.1 237814382 7886811 4004220..4004612 1 NC_012695.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4004612 phhB 7886811 phhB Burkholderia pseudomallei MSHR346 pterin-4-alpha-carbinolamine dehydratase YP_002898833.1 4004220 D 536230 CDS YP_002898834.1 237814383 7890813 complement(4004695..4005048) 1 NC_012695.1 hypothetical protein 4005048 7890813 GBP346_A4181 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898834.1 4004695 R 536230 CDS YP_002898835.1 237814384 7890899 4005047..4005739 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 4005739 7890899 GBP346_A4182 Burkholderia pseudomallei MSHR346 DNA-binding response regulator YP_002898835.1 4005047 D 536230 CDS YP_002898836.1 237814385 7887677 4005864..4007330 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08521; sensor histidine kinase 4007330 7887677 GBP346_A4183 Burkholderia pseudomallei MSHR346 sensor histidine kinase YP_002898836.1 4005864 D 536230 CDS YP_002898837.1 237814386 7889372 complement(4007772..4008335) 1 NC_012695.1 identified by match to protein family HMM PF00856; SET domain protein 4008335 7889372 GBP346_A4184 Burkholderia pseudomallei MSHR346 SET domain protein YP_002898837.1 4007772 R 536230 CDS YP_002898838.1 237814387 7887629 complement(4008594..4009706) 1 NC_012695.1 identified by match to protein family HMM PF00724; oxidoreductase, FAD/FMN-binding 4009706 7887629 GBP346_A4185 Burkholderia pseudomallei MSHR346 oxidoreductase, FAD/FMN-binding YP_002898838.1 4008594 R 536230 CDS YP_002898839.1 237814388 7890841 complement(4009944..4010654) 1 NC_012695.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 4010654 7890841 GBP346_A4186 Burkholderia pseudomallei MSHR346 glutamine amidotransferase YP_002898839.1 4009944 R 536230 CDS YP_002898840.1 237814389 7886775 complement(4010694..4011506) 1 NC_012695.1 identified by match to protein family HMM PF01022; match to protein family HMM PF01047; transcriptional regulator, MarR family 4011506 7886775 GBP346_A4187 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002898840.1 4010694 R 536230 CDS YP_002898841.1 237814390 7888875 4011288..4011551 1 NC_012695.1 putative dehydrogenase 4011551 7888875 GBP346_A4188 Burkholderia pseudomallei MSHR346 putative dehydrogenase YP_002898841.1 4011288 D 536230 CDS YP_002898842.1 237814391 7888472 complement(4011849..4012964) 1 NC_012695.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 4012964 7888472 GBP346_A4189 Burkholderia pseudomallei MSHR346 carboxylate-amine ligase YP_002898842.1 4011849 R 536230 CDS YP_002898843.1 237814392 7886929 complement(4013009..4014223) 1 NC_012695.1 identified by match to protein family HMM PF00999; hypothetical protein 4014223 7886929 GBP346_A4190 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898843.1 4013009 R 536230 CDS YP_002898844.1 237814393 7890921 complement(4014962..4016944) 1 NC_012695.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 4016944 mnmC 7890921 mnmC Burkholderia pseudomallei MSHR346 5-methylaminomethyl-2-thiouridine methyltransferase YP_002898844.1 4014962 R 536230 CDS YP_002898845.1 237814394 7890238 4016943..4017101 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4017101 7890238 GBP346_A4192 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898845.1 4016943 D 536230 CDS YP_002898846.1 237814395 7889827 4017336..4017614 1 NC_012695.1 identified by match to protein family HMM PF00216; DNA-binding protein HU-beta 4017614 7889827 GBP346_A4193 Burkholderia pseudomallei MSHR346 DNA-binding protein HU-beta YP_002898846.1 4017336 D 536230 CDS YP_002898847.1 237814396 7888249 complement(4017716..4019062) 1 NC_012695.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; CobW/P47K family protein 4019062 7888249 GBP346_A4194 Burkholderia pseudomallei MSHR346 CobW/P47K family protein YP_002898847.1 4017716 R 536230 CDS YP_002898848.1 237814397 7889461 complement(4019381..4019866) 1 NC_012695.1 identified by match to protein family HMM PF01464; BapC protein 4019866 7889461 GBP346_A4195 Burkholderia pseudomallei MSHR346 BapC protein YP_002898848.1 4019381 R 536230 CDS YP_002898849.1 237814398 7888799 4020022..4020174 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4020174 7888799 GBP346_A4196 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898849.1 4020022 D 536230 CDS YP_002898850.1 237814399 7887380 4020248..4022521 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM TIGR02517; general secretion pathway protein D 4022521 gspD 7887380 gspD Burkholderia pseudomallei MSHR346 general secretion pathway protein D YP_002898850.1 4020248 D 536230 CDS YP_002898851.1 237814400 7889488 4022518..4024011 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00437; match to protein family HMM TIGR02533; general secretory pathway protein E 4024011 gspE 7889488 gspE Burkholderia pseudomallei MSHR346 general secretory pathway protein E YP_002898851.1 4022518 D 536230 CDS YP_002898852.1 237814401 7889902 4024016..4025233 1 NC_012695.1 identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120; general secretion pathway protein F 4025233 gspF 7889902 gspF Burkholderia pseudomallei MSHR346 general secretion pathway protein F YP_002898852.1 4024016 D 536230 CDS YP_002898853.1 237814402 7888359 complement(4025293..4025703) 1 NC_012695.1 general secretion pathway protein C 4025703 7888359 GBP346_A4200 Burkholderia pseudomallei MSHR346 general secretion pathway protein C YP_002898853.1 4025293 R 536230 CDS YP_002898854.1 237814403 7890648 4025702..4025833 1 NC_012695.1 hypothetical protein 4025833 7890648 GBP346_A4201 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898854.1 4025702 D 536230 CDS YP_002898855.1 237814404 7886997 4025851..4026303 1 NC_012695.1 identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532; general secretion pathway protein G 4026303 gspG 7886997 gspG Burkholderia pseudomallei MSHR346 general secretion pathway protein G YP_002898855.1 4025851 D 536230 CDS YP_002898856.1 237814405 7890920 4026338..4026937 1 NC_012695.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532; general secretion pathway protein H 4026937 gspH 7890920 gspH Burkholderia pseudomallei MSHR346 general secretion pathway protein H YP_002898856.1 4026338 D 536230 CDS YP_002898857.1 237814406 7889618 4026934..4027344 1 NC_012695.1 identified by match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01707; match to protein family HMM TIGR02532; general secretion pathway protein I 4027344 gspI 7889618 gspI Burkholderia pseudomallei MSHR346 general secretion pathway protein I YP_002898857.1 4026934 D 536230 CDS YP_002898858.1 237814407 7887471 4027322..4028050 1 NC_012695.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; general secretory pathway protein J 4028050 7887471 GBP346_A4205 Burkholderia pseudomallei MSHR346 general secretory pathway protein J YP_002898858.1 4027322 D 536230 CDS YP_002898859.1 237814408 7890036 4028052..4029302 1 NC_012695.1 identified by match to protein family HMM PF03934; general secretion pathway protein K 4029302 gspK 7890036 gspK Burkholderia pseudomallei MSHR346 general secretion pathway protein K YP_002898859.1 4028052 D 536230 CDS YP_002898860.1 237814409 7890775 4029348..4030757 1 NC_012695.1 identified by match to protein family HMM PF05134; match to protein family HMM TIGR01709; general secretion pathway protein L 4030757 gspL 7890775 gspL Burkholderia pseudomallei MSHR346 general secretion pathway protein L YP_002898860.1 4029348 D 536230 CDS YP_002898861.1 237814410 7886927 4030754..4031260 1 NC_012695.1 identified by match to protein family HMM PF04612; general secretory pathway protein M 4031260 7886927 GBP346_A4208 Burkholderia pseudomallei MSHR346 general secretory pathway protein M YP_002898861.1 4030754 D 536230 CDS YP_002898862.1 237814411 7887978 4031299..4032090 1 NC_012695.1 general secretory pathway protein N 4032090 7887978 GBP346_A4209 Burkholderia pseudomallei MSHR346 general secretory pathway protein N YP_002898862.1 4031299 D 536230 CDS YP_002898863.1 237814412 7890739 complement(4032342..4033958) 1 NC_012695.1 outer membrane efflux lipoprotein 4033958 7890739 GBP346_A4210 Burkholderia pseudomallei MSHR346 outer membrane efflux lipoprotein YP_002898863.1 4032342 R 536230 CDS YP_002898864.1 237814413 7889794 complement(4034180..4034452) 1 NC_012695.1 hypothetical protein 4034452 7889794 GBP346_A4211 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898864.1 4034180 R 536230 CDS YP_002898865.1 237814414 7886907 4034645..4035142 1 NC_012695.1 identified by match to protein family HMM PF01047; transcriptional regulator, MarR family 4035142 7886907 GBP346_A4212 Burkholderia pseudomallei MSHR346 transcriptional regulator, MarR family YP_002898865.1 4034645 D 536230 CDS YP_002898866.1 237814415 7888153 4035290..4036852 1 NC_012695.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; multidrug resistance protein Y 4036852 7888153 GBP346_A4213 Burkholderia pseudomallei MSHR346 multidrug resistance protein Y YP_002898866.1 4035290 D 536230 CDS YP_002898867.1 237814416 7887004 complement(4036912..4037835) 1 NC_012695.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; transcriptional regulator, LysR family 4037835 7887004 GBP346_A4214 Burkholderia pseudomallei MSHR346 transcriptional regulator, LysR family YP_002898867.1 4036912 R 536230 CDS YP_002898868.1 237814417 7890151 4038038..4038445 1 NC_012695.1 identified by match to protein family HMM PF03788; LrgA family protein 4038445 7890151 GBP346_A4215 Burkholderia pseudomallei MSHR346 LrgA family protein YP_002898868.1 4038038 D 536230 CDS YP_002898869.1 237814418 7890026 4038514..4039236 1 NC_012695.1 identified by match to protein family HMM PF04172; LrgB family protein 4039236 7890026 GBP346_A4216 Burkholderia pseudomallei MSHR346 LrgB family protein YP_002898869.1 4038514 D 536230 CDS YP_002898870.1 237814419 7890870 complement(4039287..4039466) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4039466 7890870 GBP346_A4217 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898870.1 4039287 R 536230 CDS YP_002898871.1 237814420 7887654 complement(4039735..4039974) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 4039974 7887654 GBP346_A4218 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898871.1 4039735 R 536230 CDS YP_002898872.1 237814421 7888847 4040075..4040572 1 NC_012695.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 4040572 fliL 7888847 fliL Burkholderia pseudomallei MSHR346 flagellar basal body-associated protein FliL YP_002898872.1 4040075 D 536230 CDS YP_002898873.1 237814422 7887321 4040595..4041593 1 NC_012695.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 4041593 fliM 7887321 fliM Burkholderia pseudomallei MSHR346 flagellar motor switch protein FliM YP_002898873.1 4040595 D 536230 CDS YP_002898874.1 237814423 7886771 4041586..4042083 1 NC_012695.1 identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480; flagellar motor switch protein FliN 4042083 fliN 7886771 fliN Burkholderia pseudomallei MSHR346 flagellar motor switch protein FliN YP_002898874.1 4041586 D 536230 CDS YP_002898875.1 237814424 7890249 4042080..4042745 1 NC_012695.1 identified by match to protein family HMM PF04347; match to protein family HMM TIGR03500; flagellar protein FliO 4042745 7890249 GBP346_A4222 Burkholderia pseudomallei MSHR346 flagellar protein FliO YP_002898875.1 4042080 D 536230 CDS YP_002898876.1 237814425 7890289 4042747..4043577 1 NC_012695.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4043577 fliP 7890289 fliP Burkholderia pseudomallei MSHR346 flagellar biosynthesis protein FliP YP_002898876.1 4042747 D 536230 CDS YP_002898877.1 237814426 7888915 4043603..4043875 1 NC_012695.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 4043875 fliQ 7888915 fliQ Burkholderia pseudomallei MSHR346 flagellar biosynthesis protein FliQ YP_002898877.1 4043603 D 536230 CDS YP_002898878.1 237814427 7888562 4043994..4044776 1 NC_012695.1 identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400; flagellar biosynthetic protein FliR 4044776 fliR 7888562 fliR Burkholderia pseudomallei MSHR346 flagellar biosynthetic protein FliR YP_002898878.1 4043994 D 536230 CDS YP_002898879.1 237814428 7889951 complement(4045133..4045561) 1 NC_012695.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278; transcriptional regulator, MerR family 4045561 7889951 GBP346_A4226 Burkholderia pseudomallei MSHR346 transcriptional regulator, MerR family YP_002898879.1 4045133 R 536230 CDS YP_002898880.1 237814429 7888414 4045643..4046518 1 NC_012695.1 identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 4046518 7888414 GBP346_A4227 Burkholderia pseudomallei MSHR346 methyltransferase YP_002898880.1 4045643 D 536230 CDS YP_002898881.1 237814430 7887652 4046485..4047024 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 4047024 7887652 GBP346_A4228 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898881.1 4046485 D 536230 CDS YP_002898882.1 237814431 7890560 4047182..4048195 1 NC_012695.1 identified by match to protein family HMM PF09084; ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 4048195 7890560 GBP346_A4229 Burkholderia pseudomallei MSHR346 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_002898882.1 4047182 D 536230 CDS YP_002898883.1 237814432 7886842 4048279..4049076 1 NC_012695.1 identified by match to protein family HMM PF00005; alkyl sulfate ester ABC transporter AstC, ATP-binding protein 4049076 7886842 GBP346_A4230 Burkholderia pseudomallei MSHR346 alkyl sulfate ester ABC transporter AstC, ATP-binding protein YP_002898883.1 4048279 D 536230 CDS YP_002898884.1 237814433 7888146 4049104..4049952 1 NC_012695.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 4049952 7888146 GBP346_A4231 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002898884.1 4049104 D 536230 CDS YP_002898885.1 237814434 7889111 4050030..4051409 1 NC_012695.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08521; sensor histidine kinase 4051409 7889111 GBP346_A4232 Burkholderia pseudomallei MSHR346 sensor histidine kinase YP_002898885.1 4050030 D 536230 CDS YP_002898886.1 237814435 7886998 4051420..4052097 1 NC_012695.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator TctD 4052097 7886998 GBP346_A4233 Burkholderia pseudomallei MSHR346 DNA-binding response regulator TctD YP_002898886.1 4051420 D 536230 CDS YP_002898887.1 237814436 7890138 4052327..4053547 1 NC_012695.1 outer membrane porin lipoprotein 4053547 7890138 GBP346_A4235 Burkholderia pseudomallei MSHR346 outer membrane porin lipoprotein YP_002898887.1 4052327 D 536230 CDS YP_002898888.1 237814437 7887946 complement(4053508..4053858) 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4053858 7887946 GBP346_A4234 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898888.1 4053508 R 536230 CDS YP_002898889.1 237814438 7890080 4053999..4056014 1 NC_012695.1 identified by match to protein family HMM PF01555; type III DNA modification methyltransferase 4056014 7890080 GBP346_A4236 Burkholderia pseudomallei MSHR346 type III DNA modification methyltransferase YP_002898889.1 4053999 D 536230 CDS YP_002898890.1 237814439 7889069 4056055..4059084 1 NC_012695.1 identified by match to protein family HMM PF04851; type III restriction protein res subunit 4059084 7889069 GBP346_A4237 Burkholderia pseudomallei MSHR346 type III restriction protein res subunit YP_002898890.1 4056055 D 536230 CDS YP_002898891.1 237814440 7889544 4059325..4059477 1 NC_012695.1 hypothetical protein 4059477 7889544 GBP346_A4238 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898891.1 4059325 D 536230 CDS YP_002898892.1 237814441 7886732 4059622..4060722 1 NC_012695.1 outer membrane porin OpcP 4060722 7886732 GBP346_A4239 Burkholderia pseudomallei MSHR346 outer membrane porin OpcP YP_002898892.1 4059622 D 536230 CDS YP_002898893.1 237814442 7888552 4061122..4062081 1 NC_012695.1 identified by match to protein family HMM PF00165; AraC family regulatory protein 4062081 7888552 GBP346_A4240 Burkholderia pseudomallei MSHR346 AraC family regulatory protein YP_002898893.1 4061122 D 536230 CDS YP_002898894.1 237814443 7888072 complement(4062204..4062935) 1 NC_012695.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 4062935 7888072 GBP346_A4241 Burkholderia pseudomallei MSHR346 ABC transporter, ATP-binding protein YP_002898894.1 4062204 R 536230 CDS YP_002898895.1 237814444 7887171 complement(4062920..4063318) 1 NC_012695.1 DNA-binding response regulator, LuxR family 4063318 7887171 GBP346_A4242 Burkholderia pseudomallei MSHR346 DNA-binding response regulator, LuxR family YP_002898895.1 4062920 R 536230 CDS YP_002898896.1 237814445 7890277 complement(4063308..4064030) 1 NC_012695.1 identified by match to protein family HMM PF00005; branched-chain amino acid ABC transporter, ATP-binding protein 4064030 7890277 GBP346_A4243 Burkholderia pseudomallei MSHR346 branched-chain amino acid ABC transporter, ATP-binding protein YP_002898896.1 4063308 R 536230 CDS YP_002898897.1 237814446 7888209 complement(4064027..4065076) 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, permease protein 4065076 7888209 GBP346_A4244 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002898897.1 4064027 R 536230 CDS YP_002898898.1 237814447 7889446 complement(4065073..4065951) 1 NC_012695.1 identified by match to protein family HMM PF02653; ABC transporter, permease protein 4065951 7889446 GBP346_A4245 Burkholderia pseudomallei MSHR346 ABC transporter, permease protein YP_002898898.1 4065073 R 536230 CDS YP_002898899.1 237814448 7888368 complement(4065956..4067215) 1 NC_012695.1 hypothetical protein 4067215 7888368 GBP346_A4246 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898899.1 4065956 R 536230 CDS YP_002898900.1 237814449 7888723 complement(4067432..4068937) 1 NC_012695.1 identified by match to protein family HMM PF00171; phenylacetaldehyde dehydrogenase (PAD) 4068937 7888723 GBP346_A4247 Burkholderia pseudomallei MSHR346 phenylacetaldehyde dehydrogenase (PAD) YP_002898900.1 4067432 R 536230 CDS YP_002898901.1 237814450 7887391 complement(4068993..4069385) 1 NC_012695.1 hypothetical protein 4069385 7887391 GBP346_A4248 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898901.1 4068993 R 536230 CDS YP_002898902.1 237814451 7889522 complement(4069396..4070205) 1 NC_012695.1 hypothetical protein 4070205 7889522 GBP346_A4249 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898902.1 4069396 R 536230 CDS YP_002898903.1 237814452 7887761 complement(4070251..4071048) 1 NC_012695.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; oxidoreductase, short-chain dehydrogenase/reductase family 4071048 7887761 GBP346_A4250 Burkholderia pseudomallei MSHR346 oxidoreductase, short-chain dehydrogenase/reductase family YP_002898903.1 4070251 R 536230 CDS YP_002898904.1 237814453 7890366 complement(4071133..4072803) 1 NC_012695.1 identified by match to protein family HMM PF00732; match to protein family HMM PF05199; alcohol dehydrogenase (acceptor) 4072803 7890366 GBP346_A4251 Burkholderia pseudomallei MSHR346 alcohol dehydrogenase (acceptor) YP_002898904.1 4071133 R 536230 CDS YP_002898905.1 237814454 7889122 4073528..4073869 1 NC_012695.1 identified by match to protein family HMM PF03551; transcriptional regulator, PadR family 4073869 7889122 GBP346_A4252 Burkholderia pseudomallei MSHR346 transcriptional regulator, PadR family YP_002898905.1 4073528 D 536230 CDS YP_002898906.1 237814455 7887547 4073866..4075053 1 NC_012695.1 hypothetical protein 4075053 7887547 GBP346_A4253 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898906.1 4073866 D 536230 CDS YP_002898907.1 237814456 7890439 complement(4075219..4075338) 1 NC_012695.1 hypothetical protein 4075338 7890439 GBP346_A4254 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898907.1 4075219 R 536230 CDS YP_002898908.1 237814457 7890928 complement(4075397..4075702) 1 NC_012695.1 hypothetical protein 4075702 7890928 GBP346_A4255 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898908.1 4075397 R 536230 CDS YP_002898909.1 237814458 7887704 complement(4075726..4076712) 1 NC_012695.1 identified by match to protein family HMM PF00487; stearoyl-CoA 9-desaturase 4076712 7887704 GBP346_A4256 Burkholderia pseudomallei MSHR346 stearoyl-CoA 9-desaturase YP_002898909.1 4075726 R 536230 CDS YP_002898910.1 237814459 7887694 complement(4076742..4077578) 1 NC_012695.1 identified by match to protein family HMM PF07848; match to protein family HMM PF08223; PaaX domain protein, C- domain protein 4077578 7887694 GBP346_A4257 Burkholderia pseudomallei MSHR346 PaaX domain protein, C- domain protein YP_002898910.1 4076742 R 536230 CDS YP_002898911.1 237814460 7888985 complement(4078038..4079225) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00165; transcriptional regulator, AraC family 4079225 7888985 GBP346_A4258 Burkholderia pseudomallei MSHR346 transcriptional regulator, AraC family YP_002898911.1 4078038 R 536230 CDS YP_002898912.1 237814461 7888103 4079224..4080360 1 NC_012695.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; long-chain specific acyl-coa dehydrogenase, (lcad) 4080360 7888103 GBP346_A4259 Burkholderia pseudomallei MSHR346 long-chain specific acyl-coa dehydrogenase, (lcad) YP_002898912.1 4079224 D 536230 CDS YP_002898913.1 237814462 7888049 complement(4080408..4080992) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 4080992 7888049 GBP346_A4260 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898913.1 4080408 R 536230 CDS YP_002898914.1 237814463 7887823 4081011..4082216 1 NC_012695.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4082216 7887823 GBP346_A4261 Burkholderia pseudomallei MSHR346 acetyl-CoA acetyltransferase YP_002898914.1 4081011 D 536230 CDS YP_002898915.1 237814464 7887539 4082229..4084352 1 NC_012695.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; fatty oxidation complex, alpha subunit 4084352 7887539 GBP346_A4262 Burkholderia pseudomallei MSHR346 fatty oxidation complex, alpha subunit YP_002898915.1 4082229 D 536230 CDS YP_002898916.1 237814465 7889933 4084724..4085857 1 NC_012695.1 identified by match to protein family HMM PF02515; alpha-methylacyl-CoA racemase (2-methylacyl-CoAracemase) 4085857 7889933 GBP346_A4263 Burkholderia pseudomallei MSHR346 alpha-methylacyl-CoA racemase (2-methylacyl-CoAracemase) YP_002898916.1 4084724 D 536230 CDS YP_002898917.1 237814466 7889001 complement(4085934..4086500) 1 NC_012695.1 putative lipoprotein 4086500 7889001 GBP346_A4264 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898917.1 4085934 R 536230 CDS YP_002898918.1 237814467 7889116 4086693..4086815 1 NC_012695.1 hypothetical protein 4086815 7889116 GBP346_A4265 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898918.1 4086693 D 536230 CDS YP_002898919.1 237814468 7887309 complement(4086827..4087282) 1 NC_012695.1 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; putative lipoprotein 4087282 7887309 GBP346_A4266 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898919.1 4086827 R 536230 CDS YP_002898920.1 237814469 7888855 4087321..4088286 1 NC_012695.1 hypothetical protein 4088286 7888855 GBP346_A4267 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898920.1 4087321 D 536230 CDS YP_002898921.1 237814470 7887603 4088273..4088641 1 NC_012695.1 putative lipoprotein 4088641 7887603 GBP346_A4268 Burkholderia pseudomallei MSHR346 putative lipoprotein YP_002898921.1 4088273 D 536230 CDS YP_002898922.1 237814471 7889019 4088703..4088906 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4088906 7889019 GBP346_A4269 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898922.1 4088703 D 536230 CDS YP_002898923.1 237814472 7889023 complement(4089004..4089282) 1 NC_012695.1 hypothetical protein 4089282 7889023 GBP346_A4270 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898923.1 4089004 R 536230 CDS YP_002898924.1 237814473 7889326 complement(4089309..4090067) 1 NC_012695.1 transmembrane regulator PrtR 4090067 7889326 GBP346_A4271 Burkholderia pseudomallei MSHR346 transmembrane regulator PrtR YP_002898924.1 4089309 R 536230 CDS YP_002898925.1 237814474 7888130 complement(4090064..4090579) 1 NC_012695.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF sigma factor PrtI 4090579 7888130 GBP346_A4272 Burkholderia pseudomallei MSHR346 ECF sigma factor PrtI YP_002898925.1 4090064 R 536230 CDS YP_002898926.1 237814475 7890322 4090599..4090721 1 NC_012695.1 identified by glimmer; putative; hypothetical protein 4090721 7890322 GBP346_A4273 Burkholderia pseudomallei MSHR346 hypothetical protein YP_002898926.1 4090599 D 536230 CDS YP_002898927.1 237814476 7889321 4090740..4091825 1 NC_012695.1 identified by match to protein family HMM PF00199; catalase 4091825 7889321 GBP346_A4274 Burkholderia pseudomallei MSHR346 catalase YP_002898927.1 4090740 D 536230 CDS YP_002898928.1 237814477 7889868 4091822..4092349 1 NC_012695.1 identified by match to protein family HMM PF01292; cytochrome B561 4092349 7889868 GBP346_A4275 Burkholderia pseudomallei MSHR346 cytochrome B561 YP_002898928.1 4091822 D 536230 CDS YP_002898929.1 237814478 7889853 complement(4093216..4095684) 1 NC_012695.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4095684 gyrB 7889853 gyrB Burkholderia pseudomallei MSHR346 DNA gyrase subunit B YP_002898929.1 4093216 R 536230 CDS YP_002898930.1 237814479 7890826 complement(4095873..4096976) 1 NC_012695.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 4096976 dnaN 7890826 dnaN Burkholderia pseudomallei MSHR346 DNA polymerase III subunit beta YP_002898930.1 4095873 R 536230 CDS YP_002898931.1 237814480 7890470 complement(4097137..4098516) 1 NC_012695.1 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 4098516 dnaA 7890470 dnaA Burkholderia pseudomallei MSHR346 chromosomal replication initiator protein DnaA YP_002898931.1 4097137 R 536230 CDS