-- dump date 20140619_014019 -- class Genbank::CDS -- table cds_note -- id note YP_001573617.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_C6563 putative arsenate-sodium symporter YP_001573618.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_C6562 protein tyrosine phosphatase YP_001573619.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative YP_001573620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpm:BURPS1710b_A0455 glyoxalase family protein family YP_001573621.1 PFAM: regulatory protein ArsR; KEGG: bte:BTH_II0961 arsenical resistance transcriptional regulator YP_001573622.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ajs:Ajs_1878 heavy metal translocating P-type ATPase YP_001573623.1 PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_3677 outer membrane efflux protein YP_001573624.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_3678 efflux transporter, RND family, MFP subunit YP_001573625.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_3679 heavy metal efflux pump, CzcA family YP_001573626.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_3680 two component heavy metal response transcriptional regulator, winged helix family YP_001573627.1 KEGG: bch:Bcen2424_3681 heavy metal sensor signal transduction histidine kinase; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_001573628.1 KEGG: bch:Bcen2424_3682 hypothetical protein YP_001573629.1 KEGG: bch:Bcen2424_3683 hypothetical protein YP_001573630.1 PFAM: porin Gram-negative type; KEGG: bch:Bcen2424_3684 porin, gram-negative type YP_001573631.1 KEGG: bch:Bcen2424_3685 hypothetical protein YP_001573632.1 KEGG: bur:Bcep18194_B2424 hypothetical protein YP_001573633.1 KEGG: bch:Bcen2424_3687 hypothetical protein YP_001573634.1 KEGG: bch:Bcen2424_6868 putative uncharacterized conserved protein YP_001573635.1 KEGG: bch:Bcen2424_6900 histone family protein nucleoid-structuring protein H-NS YP_001573636.1 KEGG: bvi:Bcep1808_7435 hypothetical protein YP_001573637.1 KEGG: rfr:Rfer_4424 hypothetical protein YP_001573638.1 KEGG: bch:Bcen2424_6886 hypothetical protein YP_001573639.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001573640.1 KEGG: bvi:Bcep1808_7405 hypothetical protein YP_001573641.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0125 integrase, catalytic region YP_001573642.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0126 putative transposase-associated ATP-binding protein YP_001573643.1 KEGG: bvi:Bcep1808_5567 hypothetical protein YP_001573644.1 KEGG: mpt:Mpe_B0317 hypothetical protein YP_001573646.1 KEGG: vei:Veis_3685 hypothetical protein YP_001573647.1 PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_A2572 putative chromosome partitioning nuclease, ParB YP_001573648.1 KEGG: eba:p2B15 plasmid-specific DNA primase YP_001573649.1 KEGG: bvi:Bcep1808_1541 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes-like protein YP_001573650.1 KEGG: bch:Bcen2424_6936 hypothetical protein YP_001573653.1 KEGG: bch:Bcen2424_6936 hypothetical protein YP_001573654.1 KEGG: pol:Bpro_5062 hypothetical protein YP_001573655.1 KEGG: ajs:Ajs_4196 hypothetical protein YP_001573656.1 KEGG: bch:Bcen2424_6944 type IV secretory pathway VirD4 components-like protein YP_001573657.1 TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: eli:ELI_00780 TrwC protein YP_001573658.1 KEGG: bvi:Bcep1808_0442 hypothetical protein YP_001573659.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001573660.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_7618 IstB domain protein ATP-binding protein YP_001573661.1 KEGG: bvi:Bcep1808_0442 hypothetical protein YP_001573662.1 KEGG: shw:Sputw3181_3923 hypothetical protein YP_001573663.1 PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein YP_001573664.1 PFAM: Domain of unknown function DUF1795; KEGG: bur:Bcep18194_B0647 hypothetical protein YP_001573665.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_B0646 rhs element Vgr protein YP_001573666.1 KEGG: bvi:Bcep1808_7250 hypothetical protein YP_001573667.1 TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell YP_001573668.1 KEGG: cho:Chro.60244 oocyst EB module wall protein YP_001573669.1 PFAM: Sel1 domain protein repeat-containing protein YP_001573670.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: mpt:Mpe_B0378 pili biogenesis ATPase YP_001573671.1 KEGG: mpt:Mpe_B0377 thiol:disulfide interchange protein YP_001573673.1 KEGG: bvi:Bcep1808_6749 hypothetical protein YP_001573674.1 PFAM: TraH family protein; KEGG: bvi:Bcep1808_6750 TraH family protein YP_001573675.1 KEGG: eba:p1B150 sex pilus assembly protein YP_001573676.1 KEGG: bvi:Bcep1808_6752 putative pilus assembly protein,TrhF (pilin signal peptidase) YP_001573677.1 KEGG: mpt:Mpe_B0371 F-pilin subunit assembly into extended F pili YP_001573679.1 KEGG: mpt:Mpe_B0369 sex pilus assembly protein YP_001573680.1 KEGG: mpt:Mpe_B0367 sex pilus assembly protein YP_001573681.1 KEGG: mpt:Mpe_B0366 sex pilus assembly protein YP_001573682.1 KEGG: asa:ASA_P4G158 sex pilus assembly YP_001573684.1 KEGG: bvi:Bcep1808_6623 hypothetical protein YP_001573685.1 PFAM: TraU family protein; KEGG: rme:Rmet_6167 TraU YP_001573686.1 KEGG: bvi:Bcep1808_6621 sex pilus assembly and synthesis protein YP_001573687.1 PFAM: Lytic transglycosylase catalytic; KEGG: eba:ebA6594 transglycosylase SLT domain protein YP_001573688.1 KEGG: mpt:Mpe_A0592 putative thiol:disulfide interchange protein YP_001573692.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001573693.1 KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001573694.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001573695.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001573697.1 PFAM: protein of unknown function DUF1173; KEGG: ajs:Ajs_4238 protein of unknown function DUF1173 YP_001573698.1 KEGG: bvi:Bcep1808_6740 hypothetical protein YP_001573699.1 KEGG: bpd:BURPS668_0841 hypothetical protein YP_001573700.1 KEGG: bvi:Bcep1808_7254 hypothetical protein YP_001573701.1 KEGG: vha:VIBHAR_02566 hypothetical protein YP_001573702.1 KEGG: bvi:Bcep1808_7255 hypothetical protein YP_001573703.1 PFAM: TrfA family protein; KEGG: bch:Bcen2424_6873 TrfA family protein YP_001573704.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bch:Bcen2424_6874 ParB-like partition proteins YP_001573705.1 KEGG: bch:Bcen2424_6875 ATPases involved in chromosome partitioning-like protein YP_001573706.1 TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bch:Bcen2424_6876 ATP dependent DNA ligase YP_001573707.1 PFAM: SpoVT/AbrB domain protein; KEGG: bch:Bcen2424_6877 SpoVT/AbrB domain protein YP_001573708.1 PFAM: PilT protein domain protein; KEGG: bch:Bcen2424_6878 PilT protein domain protein YP_001573715.1 PFAM: integrase family protein; KEGG: bvi:Bcep1808_7050 phage integrase family protein YP_001573716.1 KEGG: mmw:Mmwyl1_2974 hypothetical protein YP_001573717.1 PFAM: helix-turn-helix domain protein; KEGG: bte:BTH_II1559 DNA-binding protein YP_001573718.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_4224 cobyrinic acid a,c-diamide synthase YP_001573719.1 PFAM: ParB domain protein nuclease; KEGG: ajs:Ajs_4223 ParB-like partition proteins YP_001573721.1 KEGG: ajs:Ajs_4219 hypothetical protein YP_001573722.1 KEGG: bch:Bcen2424_6871 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001573723.1 KEGG: bch:Bcen2424_6870 hypothetical protein YP_001573724.1 KEGG: bch:Bcen2424_6829 hypothetical protein YP_001573725.1 PFAM: integrase family protein; KEGG: psp:PSPPH_1149 site-specific recombinase, phage integrase family YP_001573726.1 KEGG: bvi:Bcep1808_6215 hypothetical protein YP_001573727.1 KEGG: pap:PSPA7_0097 site-specific recombinase, phage integrase family protein YP_001573728.1 KEGG: pst:PSPTO_4323 hypothetical protein YP_001573729.1 PFAM: nitrogen regulatory protein P-II; KEGG: bvi:Bcep1808_7182 nitrogen regulatory protein P-II YP_001573730.1 KEGG: bvi:Bcep1808_7181 hypothetical protein YP_001573731.1 KEGG: bvi:Bcep1808_7180 hypothetical protein YP_001573732.1 KEGG: bvi:Bcep1808_7179 hypothetical protein YP_001573733.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: bvi:Bcep1808_7178 protein-disulfide reductase YP_001573734.1 KEGG: bvi:Bcep1808_7177 efflux transporter, RND family, MFP subunit YP_001573735.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_7176 heavy metal efflux pump, CzcA family YP_001573736.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bvi:Bcep1808_7175 efflux transporter, RND family, MFP subunit YP_001573737.1 PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_7174 outer membrane efflux protein YP_001573738.1 KEGG: bvi:Bcep1808_7173 hypothetical protein YP_001573739.1 PFAM: protein of unknown function DUF326; KEGG: tbd:Tbd_2742 hypothetical protein YP_001573740.1 KEGG: bpd:BURPS668_A1522 hypothetical protein YP_001573741.1 PFAM: copper resistance D domain protein; KEGG: bvi:Bcep1808_3974 copper resistance D domain protein YP_001573742.1 PFAM: copper resistance protein CopC; KEGG: bvi:Bcep1808_3975 copper resistance protein CopC YP_001573743.1 KEGG: bvi:Bcep1808_3976 hypothetical protein YP_001573744.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bur:Bcep18194_B2764 multicopper oxidase, type 3 YP_001573745.1 PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2765 outer membrane efflux protein YP_001573746.1 KEGG: bte:BTH_II1961 hypothetical protein YP_001573747.1 KEGG: bte:BTH_II1962 hypothetical protein YP_001573748.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_5186 two component heavy metal response transcriptional regulator, winged helix family YP_001573749.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2769 heavy metal sensor signal transduction histidine kinase YP_001573750.1 PFAM: protein of unknown function DUF305; KEGG: bxe:Bxe_B2299 hypothetical protein YP_001573751.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6566 GCN5-related N-acetyltransferase YP_001573752.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C6565 NADPH-dependent FMN reductase YP_001573753.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_C6564 arsenate reductase YP_001573754.1 PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR1961 putative major facilitator superfamily transporter transmembrane protein YP_001578193.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001578194.1 binds the polymerase to DNA and acts as a sliding clamp YP_001578195.1 negatively supercoils closed circular double-stranded DNA YP_001578196.1 PFAM: restriction endonuclease; KEGG: maq:Maqu_3383 restriction endonuclease YP_001578197.1 PFAM: cytochrome B561; KEGG: bch:Bcen2424_0009 cytochrome b561 YP_001578198.1 PFAM: Catalase domain protein; KEGG: bam:Bamb_0007 catalase domain protein YP_001578199.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bam:Bamb_0008 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001578200.1 KEGG: bam:Bamb_0009 putative transmembrane anti-sigma factor YP_001578201.1 KEGG: bvi:Bcep1808_0027 hypothetical protein YP_001578202.1 KEGG: bvi:Bcep1808_0027 hypothetical protein YP_001578203.1 KEGG: bvi:Bcep1808_0027 hypothetical protein YP_001578204.1 KEGG: bvi:Bcep1808_0027 hypothetical protein YP_001578205.1 KEGG: xom:XOO_3742 hypothetical protein YP_001578206.1 KEGG: bur:Bcep18194_A4023 rhs element Vgr protein YP_001578207.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001578208.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001578209.1 KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001578210.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001578211.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_0367 rhs element Vgr protein YP_001578212.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001578213.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_0013 alkylhydroperoxidase like protein, AhpD family YP_001578214.1 KEGG: bch:Bcen2424_0021 hypothetical protein YP_001578215.1 PFAM: protein of unknown function DUF323; KEGG: bam:Bamb_0015 protein of unknown function DUF323 YP_001578216.1 KEGG: bam:Bamb_0016 hypothetical protein YP_001578217.1 KEGG: bch:Bcen2424_0024 hypothetical protein YP_001578218.1 KEGG: bur:Bcep18194_A3210 hypothetical protein YP_001578219.1 KEGG: bam:Bamb_0018 hypothetical protein YP_001578220.1 PFAM: type III restriction protein res subunit; KEGG: bam:Bamb_0019 type III restriction enzyme, res subunit YP_001578221.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bch:Bcen2424_0028 site-specific DNA-methyltransferase (adenine-specific) YP_001578222.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rme:Rmet_3986 two component transcriptional regulator, LuxR family YP_001578223.1 KEGG: bam:Bamb_0021 outer membrane protein (porin)-like protein YP_001578224.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_0030 two component transcriptional regulator, winged helix family YP_001578225.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bch:Bcen2424_0031 periplasmic sensor signal transduction histidine kinase YP_001578226.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A3216 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit YP_001578227.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0033 ABC transporter related YP_001578228.1 PFAM: NMT1/THI5 like domain protein; KEGG: bvi:Bcep1808_0044 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001578229.1 PFAM: Abortive infection protein; KEGG: amt:Amet_1054 abortive infection protein YP_001578230.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bam:Bamb_0027 flagellar biosynthetic protein FliR YP_001578231.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus YP_001578232.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001578233.1 PFAM: flagellar biosynthesis protein FliO; KEGG: bch:Bcen2424_0038 flagellar biosynthesis protein, FliO YP_001578234.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bur:Bcep18194_A3223 type III secretion system outer membrane O protein YP_001578235.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_001578236.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_001578237.1 PFAM: LrgB family protein; KEGG: bur:Bcep18194_A3226 LrgB-like protein YP_001578238.1 PFAM: LrgA family protein; KEGG: bch:Bcen2424_0043 LrgA family protein YP_001578239.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3228 transcriptional regulator, LysR family YP_001578240.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_0055 drug resistance transporter, EmrB/QacA subfamily YP_001578241.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_0038 transcriptional regulator, MarR family YP_001578242.1 KEGG: bur:Bcep18194_A3231 hypothetical protein YP_001578243.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_0050 RND efflux system, outer membrane lipoprotein, NodT family YP_001578244.1 KEGG: bvi:Bcep1808_0059 hypothetical protein YP_001578245.1 PFAM: General secretion pathway M protein; KEGG: bvi:Bcep1808_0060 general secretion pathway M protein YP_001578246.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: bur:Bcep18194_A3235 general secretion pathway L protein YP_001578247.1 PFAM: General secretion pathway protein K; KEGG: bam:Bamb_0044 general secretion pathway protein K YP_001578248.1 KEGG: bvi:Bcep1808_0063 putative general secretion pathway protein J YP_001578249.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: bvi:Bcep1808_0064 general secretion pathway protein I YP_001578250.1 TIGRFAM: general secretion pathway protein H; KEGG: bur:Bcep18194_A3239 general secretion pathway protein H YP_001578251.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bch:Bcen2424_0058 general secretion pathway protein G YP_001578252.1 KEGG: bvi:Bcep1808_0067 hypothetical protein YP_001578253.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bch:Bcen2424_0060 general secretion pathway protein F YP_001578254.1 KEGG: bvi:Bcep1808_0069 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_001578255.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bam:Bamb_0052 general secretion pathway protein D YP_001578256.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_0053 lytic transglycosylase, catalytic YP_001578257.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bch:Bcen2424_0064 cobalamin synthesis protein, P47K YP_001578258.1 PFAM: histone family protein DNA-binding protein; KEGG: bam:Bamb_0055 histone family protein DNA-binding protein YP_001578259.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules YP_001578260.1 PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A3249 sodium/hydrogen exchanger YP_001578261.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity YP_001578262.1 PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: bam:Bamb_0061 transcriptional regulator, MarR family YP_001578263.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_001578264.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bch:Bcen2424_0072 NADH:flavin oxidoreductase/NADH oxidase YP_001578265.1 PFAM: nuclear protein SET; KEGG: bch:Bcen2424_0073 nuclear protein SET YP_001578266.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bvi:Bcep1808_0084 integral membrane sensor signal transduction histidine kinase YP_001578267.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_0066 two component transcriptional regulator, winged helix family YP_001578268.1 KEGG: bam:Bamb_0067 hypothetical protein YP_001578269.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction YP_001578270.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_001578271.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_0070 transcriptional regulator, AsnC family YP_001578272.1 PFAM: adenylate cyclase; KEGG: bam:Bamb_0071 adenylate cyclase YP_001578273.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0072 transcriptional regulator, LysR family YP_001578274.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bch:Bcen2424_0082 glucose-methanol-choline oxidoreductase YP_001578275.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0083 ABC transporter related YP_001578276.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0084 ABC transporter related YP_001578277.1 KEGG: bvi:Bcep1808_0095 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein YP_001578278.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_0096 inner-membrane translocator YP_001578279.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_0087 inner-membrane translocator YP_001578280.1 KEGG: bch:Bcen2424_0088 hypothetical protein YP_001578281.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_0080 extracellular ligand-binding receptor YP_001578282.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3272 ABC branched-chain amino acid family transporter, inner membrane subunit YP_001578283.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0091 ABC transporter related YP_001578284.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0092 ABC transporter related YP_001578285.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001578286.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_001578287.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bch:Bcen2424_0095 cobyrinic acid a,c-diamide synthase YP_001578288.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bam:Bamb_0087 ParB-like partition proteins YP_001578289.1 PFAM: Citrate transporter; KEGG: bur:Bcep18194_A3279 Na+/H+ antiporter, NhaD family YP_001578291.1 KEGG: bvi:Bcep1808_0108 F0F1-type ATP synthase subunit I-like protein YP_001578292.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001578293.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_001578294.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_001578295.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001578296.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001578297.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001578298.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001578299.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001578300.1 activates fatty acids by binding to coenzyme A YP_001578301.1 KEGG: bvi:Bcep1808_0118 hypothetical protein YP_001578303.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A3291 prephenate dehydratase YP_001578304.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_001578305.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_001578306.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein YP_001578307.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_0104 extracellular ligand-binding receptor YP_001578308.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_0107 acyl-CoA dehydrogenase domain protein YP_001578309.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A3298 transcriptional regulator, TetR family YP_001578310.1 catalyzes the transfer of an amino moiety YP_001578311.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_0110 extracellular solute-binding protein, family 3 YP_001578312.1 PFAM: FAD linked oxidase domain protein; KEGG: bch:Bcen2424_0121 FAD linked oxidase domain protein YP_001578313.1 PFAM: transcriptional regulator PadR family protein; KEGG: bam:Bamb_0112 transcriptional regulator, PadR-like family YP_001578314.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bch:Bcen2424_0123 transcriptional regulator, MerR family YP_001578315.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bur:Bcep18194_A3304 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_001578316.1 PFAM: transcription activator effector binding; KEGG: bam:Bamb_0116 transcription activator, effector binding YP_001578317.1 PFAM: Conserved TM helix repeat-containing protein; KEGG: bur:Bcep18194_A3307 hypothetical protein YP_001578318.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_0128 ethanolamine transproter YP_001578319.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: bch:Bcen2424_0129 ethanolamine ammonia lyase large subunit YP_001578320.1 catalyzes the formation of acetaldehyde from ethanolamine YP_001578321.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0121 transcriptional regulator, LysR family YP_001578322.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0122 major facilitator superfamily MFS_1 YP_001578323.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bch:Bcen2424_0133 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001578324.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A3314 aldehyde dehydrogenase (NAD+) YP_001578325.1 KEGG: bur:Bcep18194_A3315 hypothetical protein YP_001578326.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_0126 transcriptional regulator, AraC family YP_001578327.1 KEGG: bur:Bcep18194_A3317 hypothetical protein YP_001578328.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit YP_001578329.1 KEGG: bur:Bcep18194_A3319 SpoVT/AbrB-like protein YP_001578330.1 PFAM: PilT protein domain protein; KEGG: bur:Bcep18194_A3320 PilT protein-like YP_001578331.1 KEGG: bvi:Bcep1808_0147 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001578332.1 KEGG: bch:Bcen2424_0143 hypothetical protein YP_001578333.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001578334.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001578335.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_001578336.1 KEGG: bur:Bcep18194_A3326 hypothetical protein YP_001578337.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bam:Bamb_0135 oxidoreductase domain protein YP_001578338.1 PFAM: UvrD/REP helicase; KEGG: bvi:Bcep1808_0155 UvrD/REP helicase YP_001578339.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_0138 cytochrome c, class I YP_001578340.1 KEGG: bam:Bamb_0141 hypothetical protein YP_001578341.1 KEGG: bch:Bcen2424_0239 hypothetical protein YP_001578342.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bch:Bcen2424_0240 flagellar hook-associated 2 domain protein YP_001578343.1 PFAM: flagellin domain protein; KEGG: bvi:Bcep1808_0199 flagellin domain protein YP_001578344.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001578345.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bch:Bcen2424_0244 PepSY-associated TM helix domain protein YP_001578346.1 PFAM: methyladenine glycosylase; KEGG: bch:Bcen2424_0245 DNA-3-methyladenine glycosylase I YP_001578347.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bch:Bcen2424_0246 ATPase, BadF/BadG/BcrA/BcrD type YP_001578348.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: bch:Bcen2424_0247 Cof-like hydrolase YP_001578349.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure YP_001578350.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bch:Bcen2424_0249 histone family protein nucleoid-structuring protein H-NS YP_001578351.1 PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_0208 glycosyl transferase, group 1 YP_001578352.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems YP_001578353.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems YP_001578354.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_001578355.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_001578356.1 PFAM: response regulator receiver; KEGG: bch:Bcen2424_0255 response regulator receiver protein YP_001578357.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; KEGG: bch:Bcen2424_0256 CheA signal transduction histidine kinases YP_001578358.1 PFAM: CheW domain protein; KEGG: bur:Bcep18194_A3359 CheW protein YP_001578359.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bch:Bcen2424_0258 methyl-accepting chemotaxis sensory transducer YP_001578360.1 PFAM: MCP methyltransferase CheR-type; KEGG: bam:Bamb_0172 MCP methyltransferase, CheR-type YP_001578361.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors YP_001578362.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001578363.1 PFAM: response regulator receiver; KEGG: bvi:Bcep1808_0221 response regulator receiver protein YP_001578364.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation YP_001578365.1 KEGG: bam:Bamb_0177 hypothetical protein YP_001578366.1 KEGG: bam:Bamb_0178 hypothetical protein YP_001578367.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_001578368.1 membrane protein involved in the flagellar export apparatus YP_001578369.1 positive regulator of class III flagellar genes YP_001578370.1 KEGG: bch:Bcen2424_0270 flagellar biosynthesis protein, FlhG YP_001578371.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes YP_001578372.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001578373.1 PFAM: membrane protein of unknown function; KEGG: bam:Bamb_0187 membrane protein of unknown function YP_001578374.1 KEGG: bch:Bcen2424_0274 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_001578375.1 PFAM: Amidase; KEGG: bch:Bcen2424_0275 amidase YP_001578376.1 PFAM: dienelactone hydrolase; KEGG: bam:Bamb_0190 carboxymethylenebutenolidase YP_001578377.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bam:Bamb_0191 2-nitropropane dioxygenase, NPD YP_001578378.1 PFAM: Extracellular ligand-binding receptor; KEGG: bch:Bcen2424_0278 extracellular ligand-binding receptor YP_001578379.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0193 major facilitator superfamily MFS_1 YP_001578380.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bur:Bcep18194_A3383 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001578381.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001578382.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_A3384 histone-like nucleoid-structuring protein H-NS YP_001578383.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bur:Bcep18194_A3385 cation efflux protein YP_001578384.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_0197 transcriptional regulator, AsnC family YP_001578385.1 KEGG: bch:Bcen2424_0284 hypothetical protein YP_001578386.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_A3388 beta-lactamase-like YP_001578387.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bur:Bcep18194_A3389 rare lipoprotein A YP_001578388.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bam:Bamb_0201 protein of unknown function UPF0011 YP_001578389.1 PFAM: protein of unknown function UPF0102; KEGG: bch:Bcen2424_0290 protein of unknown function UPF0102 YP_001578390.1 KEGG: bur:Bcep18194_A3392 phosphoheptose isomerase YP_001578391.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bam:Bamb_0204 transport-associated YP_001578392.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_0293 cytochrome c, class I YP_001578393.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_0216 glucarate dehydratase YP_001578394.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3397 D-galactonate transporter YP_001578395.1 KEGG: bur:Bcep18194_A3398 hypothetical protein YP_001578396.1 PFAM: protein of unknown function DUF214; KEGG: bch:Bcen2424_0301 protein of unknown function DUF214 YP_001578397.1 PFAM: protein of unknown function DUF214; KEGG: bch:Bcen2424_0302 protein of unknown function DUF214 YP_001578398.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0303 ABC transporter related YP_001578399.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A3403 secretion protein HlyD family YP_001578400.1 KEGG: bvi:Bcep1808_0288 hypothetical protein YP_001578401.1 PFAM: protein of unknown function DUF82; KEGG: bch:Bcen2424_0306 protein of unknown function DUF82 YP_001578402.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bch:Bcen2424_0307 6-phosphogluconate dehydrogenase, NAD-binding YP_001578403.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bvi:Bcep1808_0290 lysine exporter protein (LysE/YggA) YP_001578404.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0309 major facilitator superfamily MFS_1 YP_001578405.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0229 transcriptional regulator, LysR family YP_001578406.1 PFAM: OmpW family protein; KEGG: bur:Bcep18194_A3410 OmpW family protein YP_001578407.1 KEGG: bam:Bamb_0231 hypothetical protein YP_001578408.1 KEGG: bam:Bamb_0232 hypothetical protein YP_001578409.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001578410.1 PFAM: PEBP family protein; KEGG: bam:Bamb_0235 YbhB and YbcL YP_001578411.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001578412.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001578413.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001578414.1 KEGG: bam:Bamb_0239 hypothetical protein YP_001578415.1 KEGG: bvi:Bcep1808_0303 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001578416.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bmv:BMASAVP1_A3119 putative leucine-responsive regulatory protein YP_001578417.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A3422 GCN5-related N-acetyltransferase YP_001578418.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_0324 transcriptional regulator, TetR family YP_001578419.1 PFAM: Domain of unknown function DUF1835; KEGG: bch:Bcen2424_0325 hypothetical protein YP_001578420.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bch:Bcen2424_0326 phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_001578421.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bch:Bcen2424_0327 phenylacetate-CoA oxygenase, PaaJ subunit YP_001578422.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bam:Bamb_0247 phenylacetate-CoA oxygenase, PaaI subunit YP_001578423.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation YP_001578424.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_001578425.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bur:Bcep18194_A3430 lipolytic enzyme, G-D-S-L YP_001578426.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001578427.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_001578428.1 Modulates Rho-dependent transcription termination YP_001578429.1 binds directly to 23S ribosomal RNA YP_001578430.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001578431.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001578432.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001578433.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001578434.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001578435.1 KEGG: bch:Bcen2424_0342 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_001578436.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001578437.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001578438.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001578439.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001578440.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001578441.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001578442.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001578443.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001578444.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001578445.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001578446.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001578447.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_001578448.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001578449.1 one of the stabilizing components for the large ribosomal subunit YP_001578450.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001578451.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: bte:BTH_I3058 ribosomal protein L14 YP_001578452.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001578453.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001578454.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001578455.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_001578456.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001578457.1 binds 5S rRNA along with protein L5 and L25 YP_001578458.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001578459.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001578460.1 late assembly protein YP_001578461.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001578462.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001578463.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_001578464.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001578465.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001578466.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001578467.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001578468.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001578469.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: bam:Bamb_0295 CutA1 divalent ion tolerance protein YP_001578470.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: bur:Bcep18194_A3476 protein-disulfide reductase YP_001578471.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001578472.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001578473.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_0380 cytochrome c, class I YP_001578474.1 PFAM: ResB family protein; KEGG: bur:Bcep18194_A3480 ResB-like/cytochrome c biosynthesis protein YP_001578475.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: bch:Bcen2424_0382 cytochrome c assembly protein YP_001578476.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_001578477.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme YP_001578478.1 KEGG: bam:Bamb_0304 putative lipoprotein YP_001578479.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly YP_001578480.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_2714 integrase, catalytic region YP_001578481.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001578482.1 KEGG: bch:Bcen2424_0387 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001578483.1 KEGG: bam:Bamb_0307 hypothetical protein YP_001578484.1 PFAM: Fimbrial assembly family protein; KEGG: bch:Bcen2424_0389 fimbrial assembly family protein YP_001578485.1 KEGG: bch:Bcen2424_0390 hypothetical protein YP_001578486.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: bur:Bcep18194_A3488 type II and III secretion system protein YP_001578487.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_001578488.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_001578489.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001578490.1 with UgpACE is involved in the uptake of glycerol-3-phosphate YP_001578491.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_0315 binding-protein-dependent transport systems inner membrane component YP_001578492.1 with UgpABC is involved in uptake of glycerol-3-phosphate YP_001578493.1 part of the UgpABCE glycerol-3-phosphate uptake system YP_001578494.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate YP_001578495.1 PFAM: OmpW family protein; KEGG: bvi:Bcep1808_0382 OmpW family protein YP_001578496.1 PFAM: protein of unknown function DUF1568; KEGG: bam:Bamb_0320 protein of unknown function DUF1568 YP_001578497.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bcn:Bcen_2705 glutamate synthase (ferredoxin) YP_001578498.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001578499.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bch:Bcen2424_0404 amino acid carrier protein YP_001578500.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: bvi:Bcep1808_0387 2'-5' RNA ligase YP_001578501.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_0406 D-amino-acid dehydrogenase YP_001578502.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0407 major facilitator superfamily MFS_1 YP_001578503.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3506 short-chain dehydrogenase/reductase SDR YP_001578504.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3507 ABC transporter, fused ATPase and inner membrane subunits YP_001578505.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_0328 FAD dependent oxidoreductase YP_001578506.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate YP_001578507.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_001578508.1 KEGG: bur:Bcep18194_A3511 thiamine-phosphate diphosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_001578509.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0414 ABC transporter related YP_001578510.1 PFAM: protein of unknown function DUF140; KEGG: bvi:Bcep1808_0394 protein of unknown function DUF140 YP_001578511.1 PFAM: Mammalian cell entry related domain protein; KEGG: bam:Bamb_0334 mammalian cell entry related domain protein YP_001578512.1 PFAM: VacJ family lipoprotein; KEGG: bam:Bamb_0335 VacJ family lipoprotein YP_001578513.1 PFAM: toluene tolerance family protein; KEGG: bch:Bcen2424_0418 toluene tolerance family protein YP_001578514.1 KEGG: bur:Bcep18194_A3517 hypothetical protein YP_001578515.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_0399 ABC transporter related YP_001578516.1 PFAM: ABC-2 type transporter; KEGG: bch:Bcen2424_0421 ABC-2 type transporter YP_001578517.1 PFAM: BolA family protein; KEGG: bur:Bcep18194_A3520 BolA-like protein YP_001578518.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001578519.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_001578520.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001578521.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001578522.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001578523.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bvi:Bcep1808_0407 multiple antibiotic resistance (MarC)-related protein YP_001578524.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001578525.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_001578526.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001578527.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers YP_001578528.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis YP_001578529.1 KEGG: bch:Bcen2424_0434 membrane protein YP_001578530.1 PFAM: histidine triad (HIT) protein; KEGG: bch:Bcen2424_0435 histidine triad (HIT) protein YP_001578531.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001578532.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bch:Bcen2424_0437 twin-arginine translocation protein, TatB subunit YP_001578533.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bvi:Bcep1808_0417 sec-independent protein translocase, TatC subunit YP_001578534.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bam:Bamb_0357 peptidase S1 and S6, chymotrypsin/Hap YP_001578535.1 PFAM: protein of unknown function DUF34; KEGG: bur:Bcep18194_A3538 protein of unknown function DUF34 YP_001578536.1 KEGG: bch:Bcen2424_0441 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein YP_001578537.1 PFAM: Cytochrome b/b6 domain; KEGG: bvi:Bcep1808_0421 cytochrome b/b6, N-terminal domain YP_001578538.1 PFAM: cytochrome c1; KEGG: bam:Bamb_0361 cytochrome c1 YP_001578539.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_0362 glutathione S-transferase, N-terminal domain YP_001578540.1 PFAM: Stringent starvation protein B; KEGG: bch:Bcen2424_0445 stringent starvation protein B YP_001578541.1 KEGG: esa:ESA_01120 hypothetical protein YP_001578542.1 KEGG: bur:Bcep18194_A3547 hypothetical protein YP_001578543.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bur:Bcep18194_A3548 ABC amino acid transporter, periplasmic ligand binding protein YP_001578544.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bch:Bcen2424_0459 rhs element Vgr protein YP_001578545.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: bvi:Bcep1808_0452 YD repeat protein YP_001578546.1 KEGG: pen:PSEEN2325 hypothetical protein YP_001578547.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: bch:Bcen2424_0460 YD repeat protein YP_001578548.1 PFAM: transposase mutator type; KEGG: bte:BTH_II0431 transposase, mutator family YP_001578549.1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001578550.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bcn:Bcen_2325 Na+/H+ antiporter YP_001578551.1 PFAM: EAL domain protein; KEGG: bam:Bamb_2985 diguanylate phosphodiesterase YP_001578552.1 PFAM: CutC family protein; KEGG: bur:Bcep18194_A6287 CutC family protein YP_001578553.1 KEGG: bmn:BMA10247_A0288 hypothetical protein YP_001578554.1 PFAM: biotin and thiamin synthesis associated; KEGG: bam:Bamb_2983 biotin synthase YP_001578555.1 KEGG: bur:Bcep18194_A6287 CutC family protein YP_001578556.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_A6285 permease for cytosine/purines, uracil, thiamine, allantoin tranporter YP_001578557.1 KEGG: bur:Bcep18194_A6284 allophanate hydrolase; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_001578558.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6283 allophanate hydrolase subunit 1 YP_001578559.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001578560.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bur:Bcep18194_A6281 acetyl-CoA carboxylase YP_001578561.1 PFAM: LamB/YcsF family protein; KEGG: bur:Bcep18194_A6280 LamB/YcsF family protein YP_001578562.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6279 transcriptional regulator, LysR family YP_001578563.1 KEGG: bvi:Bcep1808_3029 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001578564.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium YP_001578565.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_001578566.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate YP_001578567.1 KEGG: bch:Bcen2424_2930 dienelactone hydrolase and related enzymes-like protein YP_001578568.1 KEGG: bam:Bamb_2978 hypothetical protein YP_001578569.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6271 short chain dehydrogenase YP_001578570.1 PFAM: carbonic anhydrase; KEGG: bam:Bamb_2976 carbonate dehydratase YP_001578571.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol YP_001578572.1 PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_A6268 beta-lactamase-like YP_001578573.1 PFAM: extracellular solute-binding protein family 5; KEGG: bvi:Bcep1808_3018 extracellular solute-binding protein, family 5 YP_001578574.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_2922 short-chain dehydrogenase/reductase SDR YP_001578575.1 PFAM: DSBA oxidoreductase; KEGG: bvi:Bcep1808_3016 DsbA oxidoreductase YP_001578576.1 PFAM: Sporulation domain protein; KEGG: bch:Bcen2424_2920 sporulation domain protein YP_001578577.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001578578.1 PFAM: Domain of unknown function DUF1840; KEGG: bch:Bcen2424_2918 hypothetical protein YP_001578579.1 KEGG: bvi:Bcep1808_3012 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein YP_001578580.1 PFAM: homocysteine S-methyltransferase; KEGG: bam:Bamb_2965 methionine synthase YP_001578581.1 KEGG: bam:Bamb_2964 hypothetical protein YP_001578582.1 KEGG: bur:Bcep18194_A6257 hypothetical protein YP_001578583.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_A6256 transcriptional regulator, IclR family YP_001578584.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_A6255 fumarylacetoacetate (FAA) hydrolase YP_001578585.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001578586.1 KEGG: bvi:Bcep1808_3005 hypothetical protein YP_001578587.1 PFAM: Patatin; KEGG: bch:Bcen2424_2909 patatin YP_001578588.1 KEGG: bvi:Bcep1808_3003 hypothetical protein YP_001578589.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: bvi:Bcep1808_3002 RfaE bifunctional protein YP_001578590.1 KEGG: bur:Bcep18194_A6249 hypothetical protein YP_001578591.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_001578592.1 KEGG: lma:LmjF35.0540 proteophosphoglycan 5 YP_001578593.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bch:Bcen2424_2903 Sel1 domain protein repeat-containing protein YP_001578594.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bur:Bcep18194_A6244 5'-nucleotidase-like YP_001578595.1 PFAM: protein of unknown function DUF140; KEGG: bch:Bcen2424_2901 protein of unknown function DUF140 YP_001578596.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6242 ABC transporter, ATPase subunit YP_001578597.1 PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_A6241 ABC transporter, periplasmic ligand binding protein YP_001578598.1 KEGG: bch:Bcen2424_2898 ABC-type uncharacterized transport system auxiliary component-like protein YP_001578599.1 PFAM: VanZ family protein; KEGG: bch:Bcen2424_2897 VanZ like protein YP_001578600.1 KEGG: bvi:Bcep1808_2991 ferredoxin-like protein YP_001578601.1 KEGG: bch:Bcen2424_2895 hydrolase of the alpha/beta superfamily-like protein YP_001578603.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bvi:Bcep1808_2989 serine-type D-Ala-D-Ala carboxypeptidase YP_001578604.1 PFAM: aminotransferase class IV; KEGG: bvi:Bcep1808_2988 aminotransferase, class IV YP_001578605.1 PFAM: protein of unknown function DUF493; KEGG: bch:Bcen2424_2891 protein of unknown function DUF493 YP_001578606.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence YP_001578607.1 KEGG: bch:Bcen2424_2889 hypothetical protein YP_001578608.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_001578609.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001578611.1 KEGG: bch:Bcen2424_2886 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001578612.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_2885 ABC transporter related YP_001578613.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcn:Bcen_2269 binding-protein-dependent transport systems inner membrane component YP_001578614.1 KEGG: bur:Bcep18194_A6223 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001578615.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_2977 transcriptional regulator, LysR family YP_001578616.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bcn:Bcen_2265 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_001578617.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bam:Bamb_2933 acyl-CoA dehydrogenase domain protein YP_001578618.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_2932 acyl-CoA dehydrogenase domain protein YP_001578619.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A6218 L-carnitine dehydratase/bile acid-inducible protein F YP_001578620.1 PFAM: protein of unknown function DUF485; KEGG: bch:Bcen2424_2875 protein of unknown function DUF485 YP_001578621.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake YP_001578622.1 involved in the transport of C4-dicarboxylates across the membrane YP_001578623.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_2927 periplasmic sensor signal transduction histidine kinase YP_001578624.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bam:Bamb_2926 two component, sigma54 specific, transcriptional regulator, fis family YP_001578625.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_2925 redoxin domain protein YP_001578626.1 KEGG: bch:Bcen2424_2869 hypothetical protein YP_001578627.1 KEGG: bam:Bamb_2923 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001578628.1 PFAM: protein of unknown function DUF526; KEGG: bam:Bamb_2922 protein of unknown function DUF526 YP_001578629.1 PFAM: nitrogen regulatory protein P-II; KEGG: bam:Bamb_2921 nitrogen regulatory protein P-II YP_001578630.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bch:Bcen2424_2865 ammonium transporter YP_001578631.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: bch:Bcen2424_2864 glutamate--cysteine ligase YP_001578632.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001578633.1 PFAM: PTS system fructose subfamily IIA component; KEGG: bch:Bcen2424_2862 PTS system fructose subfamily IIA component YP_001578634.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: bch:Bcen2424_2861 phosphocarrier, HPr family YP_001578635.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bcn:Bcen_2246 phosphoenolpyruvate-protein phosphotransferase YP_001578636.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bam:Bamb_2914 UBA/ThiF-type NAD/FAD binding protein YP_001578637.1 KEGG: bvi:Bcep1808_2958 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001578638.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_001578639.1 PFAM: Rhodanese domain protein; KEGG: bam:Bamb_2911 rhodanese domain protein YP_001578640.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: bch:Bcen2424_2855 glutaredoxin 3 YP_001578641.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA YP_001578642.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001578643.1 PFAM: Appr-1-p processing domain protein; KEGG: bam:Bamb_2907 Appr-1-p processing domain protein YP_001578644.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bvi:Bcep1808_2951 RNA methyltransferase, TrmH family, group 2 YP_001578645.1 KEGG: bur:Bcep18194_A6179 phosphoribosyltransferase YP_001578646.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bam:Bamb_2904 methyltransferase type 11 YP_001578647.1 KEGG: bch:Bcen2424_2848 integral membrane protein-like protein YP_001578648.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; OmpA/MotB domain protein; cytochrome C oxidase subunit II transmembrane region; KEGG: bch:Bcen2424_2847 cytochrome c oxidase, subunit II YP_001578649.1 KEGG: bam:Bamb_2901 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001578650.1 KEGG: bvi:Bcep1808_2945 hypothetical protein YP_001578651.1 involved in the insertion of copper into subunit I of cytochrome C oxidase YP_001578652.1 KEGG: bur:Bcep18194_A6173 hypothetical protein YP_001578653.1 PFAM: cytochrome c oxidase subunit III; KEGG: bvi:Bcep1808_2942 cytochrome c oxidase, subunit III YP_001578654.1 KEGG: bvi:Bcep1808_2941 hypothetical protein YP_001578655.1 KEGG: bam:Bamb_2897 SURF1 family protein YP_001578656.1 KEGG: bvi:Bcep1808_2939 hypothetical protein YP_001578657.1 PFAM: cytochrome oxidase assembly; KEGG: bam:Bamb_2895 cytochrome oxidase assembly YP_001578658.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001578659.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: bvi:Bcep1808_2936 electron transport protein SCO1/SenC YP_001578660.1 PFAM: YCII-related; KEGG: bch:Bcen2424_2835 YCII-related YP_001578661.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bch:Bcen2424_2834 methyl-accepting chemotaxis sensory transducer YP_001578662.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bam:Bamb_2890 lipoprotein, YaeC family YP_001578663.1 KEGG: bur:Bcep18194_A6162 hypothetical protein YP_001578664.1 PFAM: protein of unknown function DUF534; KEGG: bch:Bcen2424_2831 protein of unknown function DUF534 YP_001578665.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A6160 ABC transporter, inner membrane subunit YP_001578666.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6159 ABC transporter, ATPase subunit YP_001578667.1 KEGG: bch:Bcen2424_2828 hypothetical protein YP_001578668.1 KEGG: bam:Bamb_2887 hypothetical protein YP_001578669.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase. YP_001578670.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_2885 transcriptional regulator, GntR family YP_001578671.1 KEGG: bur:Bcep18194_A6154 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_001578672.1 PFAM: sugar isomerase (SIS); KEGG: bam:Bamb_2883 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_001578673.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; sugar-specific permease EIIA 1 domain; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bur:Bcep18194_A6152 phosphoryl transfer system, HPr/phosphoenolpyruvate-protein phosphotransferase YP_001578674.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: bch:Bcen2424_2821 PTS system, N-acetylglucosamine-specific IIBC subunit YP_001578675.1 KEGG: bch:Bcen2424_2818 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_001578676.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bmn:BMA10247_2868 cytochrome d ubiquinol oxidase, subunit I YP_001578677.1 KEGG: bch:Bcen2424_2816 hypothetical protein YP_001578678.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_001578679.1 KEGG: bam:Bamb_2874 hypothetical protein YP_001578680.1 KEGG: bur:Bcep18194_A6143 hypothetical protein YP_001578681.1 KEGG: bam:Bamb_2872 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase YP_001578682.1 PFAM: glycosyl transferase family 3; KEGG: bch:Bcen2424_2811 glycosyl transferase, family 3 YP_001578683.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A6140 maleylacetoacetate isomerase YP_001578684.1 KEGG: bch:Bcen2424_2809 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001578685.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: bch:Bcen2424_2808 putative methyltransferase YP_001578686.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001578687.1 PFAM: integrase family protein; KEGG: pna:Pnap_3921 phage integrase family protein YP_001578688.1 KEGG: aeh:Mlg_0386 hypothetical protein YP_001578689.1 KEGG: son:SO_4341 hypothetical protein YP_001578690.1 KEGG: bxe:Bxe_C0807 hypothetical protein YP_001578691.1 KEGG: pnu:Pnuc_2061 hypothetical protein YP_001578692.1 PFAM: integrase family protein; KEGG: pnu:Pnuc_1839 phage integrase family protein YP_001578693.1 KEGG: rme:Rmet_5343 hypothetical protein YP_001578694.1 KEGG: rme:Rmet_5344 hypothetical protein YP_001578695.1 KEGG: tcr:504039.180 mucin-associated surface protein (MASP) Pfam: Mucin PROSITE: ALA_RICH GLU_RICH YP_001578696.1 KEGG: bpm:BURPS1710b_3662 cell wall surface anchor family protein, putative YP_001578698.1 SMART: AAA ATPase; KEGG: pnu:Pnuc_1685 hypothetical protein YP_001578701.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bam:Bamb_2866 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001578702.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001578703.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001578704.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001578705.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_001578706.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001578707.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein YP_001578708.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bvi:Bcep1808_2904 tetratricopeptide TPR_2 repeat protein YP_001578709.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001578710.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: bch:Bcen2424_2797 A/G-specific adenine glycosylase YP_001578711.1 PFAM: peptidase S16 lon domain protein; KEGG: bam:Bamb_2856 peptidase S16, lon domain protein YP_001578712.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_2855 uncharacterised P-loop ATPase protein UPF0042 YP_001578713.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_001578714.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bur:Bcep18194_A6123 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001578715.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bvi:Bcep1808_2897 sigma 54 modulation protein/ribosomal protein S30EA YP_001578716.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_001578717.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_2790 ABC transporter related YP_001578718.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: bvi:Bcep1808_2894 OstA family protein YP_001578719.1 PFAM: protein of unknown function DUF1239; KEGG: bch:Bcen2424_2788 protein of unknown function DUF1239 YP_001578720.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bur:Bcep18194_A6117 phosphatase KdsC YP_001578721.1 KEGG: bur:Bcep18194_A6116 sugar isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_001578722.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: bch:Bcen2424_2785 sodium/hydrogen exchanger YP_001578723.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001578724.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bvi:Bcep1808_2888 lysine exporter protein (LysE/YggA) YP_001578725.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_2842 NUDIX hydrolase YP_001578726.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001578727.1 KEGG: bch:Bcen2424_2780 putative transporter YP_001578728.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bch:Bcen2424_2779 excinuclease ABC, A subunit YP_001578729.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2838 major facilitator superfamily MFS_1 YP_001578730.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA YP_001578732.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair YP_001578733.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_2826 cobyrinic acid a,c-diamide synthase YP_001578734.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bam:Bamb_2825 phasin family protein YP_001578735.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001578736.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_2771 acetoacetyl-CoA reductase YP_001578737.1 KEGG: bam:Bamb_2822 hypothetical protein YP_001578738.1 PFAM: peptidase M48 Ste24p; KEGG: bvi:Bcep1808_2860 peptidase M48, Ste24p YP_001578739.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bch:Bcen2424_2752 phospholipase D/transphosphatidylase YP_001578740.1 PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_2800 class II aldolase/adducin family protein YP_001578741.1 KEGG: bch:Bcen2424_2750 hypothetical protein YP_001578743.1 PFAM: CHRD domain containing protein; KEGG: bam:Bamb_2798 CHRD domain containing protein YP_001578744.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_A6075 lipolytic enzyme YP_001578745.1 KEGG: bam:Bamb_2796 hypothetical protein YP_001578746.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2745 major facilitator superfamily MFS_1 YP_001578747.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A6072 transcriptional regulator, MarR family YP_001578748.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bch:Bcen2424_2743 intracellular protease, PfpI family YP_001578749.1 KEGG: bam:Bamb_2792 amino acid aldolase or racemase-like protein YP_001578750.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bam:Bamb_2791 transcriptional regulator, RpiR family YP_001578751.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: bam:Bamb_2790 N-acyl-D-amino-acid deacylase YP_001578752.1 PFAM: Endoribonuclease L-PSP; KEGG: bte:BTH_I0547 endoribonuclease L-PSP, putative YP_001578753.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis YP_001578754.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway YP_001578755.1 KEGG: bur:Bcep18194_A6063 hypothetical protein YP_001578756.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bvi:Bcep1808_2841 FAD linked oxidase domain protein YP_001578757.1 PFAM: histidine triad (HIT) protein; KEGG: bam:Bamb_2785 histidine triad (HIT) protein YP_001578758.1 PFAM: protein of unknown function DUF971; KEGG: bch:Bcen2424_2733 protein of unknown function DUF971 YP_001578759.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_001578760.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bch:Bcen2424_2731 import inner membrane translocase, subunit Tim44 YP_001578761.1 KEGG: bam:Bamb_2781 protein of unknown function DUF1243 YP_001578762.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions YP_001578763.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bam:Bamb_2779 thiopurine S-methyltransferase YP_001578764.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bur:Bcep18194_A6054 hypothetical protein YP_001578765.1 PFAM: protein of unknown function DUF502; KEGG: bvi:Bcep1808_2832 protein of unknown function DUF502 YP_001578766.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_001578767.1 converts dATP to dAMP and pyrophosphate YP_001578768.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_A6050 phospholipase D/transphosphatidylase YP_001578769.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_2828 transcriptional regulator, TetR family YP_001578770.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bvi:Bcep1808_2827 acyl-CoA dehydrogenase domain protein YP_001578771.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bcn:Bcen_2108 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_001578772.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001578773.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001578774.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bam:Bamb_2769 formate dehydrogenase family accessory protein FdhD YP_001578775.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_2768 hypothetical protein YP_001578776.1 PFAM: thioesterase superfamily protein; KEGG: bvi:Bcep1808_2816 thioesterase superfamily protein YP_001578777.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_2815 ABC transporter related YP_001578778.1 PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_A6040 nucleotidyl transferase YP_001578779.1 PFAM: aminoglycoside phosphotransferase; KEGG: bch:Bcen2424_2712 aminoglycoside phosphotransferase YP_001578780.1 PFAM: Organic solvent tolerance protein; KEGG: bch:Bcen2424_2711 organic solvent tolerance protein YP_001578781.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: bch:Bcen2424_2710 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001578782.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001578783.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001578784.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A6034 protein of unknown function DUF6, transmembrane YP_001578785.1 KEGG: bam:Bamb_2758 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001578786.1 PFAM: protein of unknown function DUF45; KEGG: bur:Bcep18194_A6032 protein of unknown function DUF45 YP_001578787.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bvi:Bcep1808_2805 phospholipid/glycerol acyltransferase YP_001578788.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate YP_001578789.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001578790.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001578791.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bcn:Bcen_2088 tetratricopeptide TPR_2 YP_001578792.1 Transfers the fatty acyl group on membrane lipoproteins YP_001578793.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: bch:Bcen2424_2698 CBS domain containing protein YP_001578794.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: bch:Bcen2424_2696 ChaC family protein YP_001578795.1 contains unknown N-terminal domain/putative metalloprotease C-terminal domain YP_001578796.1 PFAM: PhoH family protein; KEGG: bam:Bamb_2747 PhoH family protein YP_001578797.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001578798.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2745 transcriptional regulator, LysR family YP_001578799.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2691 major facilitator superfamily MFS_1 YP_001578800.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bch:Bcen2424_2690 transcriptional regulator, XRE family YP_001578801.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: bam:Bamb_2742 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001578802.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bch:Bcen2424_2687 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001578803.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bch:Bcen2424_2686 inositol 2-dehydrogenase YP_001578804.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bch:Bcen2424_2685 xylose isomerase domain protein TIM barrel YP_001578805.1 KEGG: bur:Bcep18194_A6012 hypothetical protein YP_001578806.1 PFAM: regulatory protein LacI; KEGG: bam:Bamb_2736 transcriptional regulator, LacI family YP_001578807.1 PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_2682 fatty acid desaturase YP_001578808.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_2734 Rieske (2Fe-2S) domain protein, MocE subfamily YP_001578809.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A6008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001578810.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bur:Bcep18194_A6007 aquaporin YP_001578811.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_001578812.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001578813.1 KEGG: bam:Bamb_2729 hypothetical protein YP_001578814.1 KEGG: bam:Bamb_2728 hypothetical protein YP_001578815.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bch:Bcen2424_2674 transcriptional regulator, DeoR family YP_001578816.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bam:Bamb_2726 gamma-glutamyltransferase YP_001578817.1 KEGG: bch:Bcen2424_2672 hypothetical protein YP_001578818.1 KEGG: bur:Bcep18194_A5999 hypothetical protein YP_001578819.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bvi:Bcep1808_2782 DEAD/DEAH box helicase domain protein YP_001578820.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_2781 cytochrome c, class I YP_001578821.1 KEGG: bvi:Bcep1808_2780 cytochrome c, class I YP_001578822.1 PFAM: copper resistance D domain protein; KEGG: bur:Bcep18194_A5995 copper resistance D YP_001578823.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bch:Bcen2424_2666 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein YP_001578824.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_2718 GntR domain protein YP_001578825.1 PFAM: protein of unknown function DUF1272; KEGG: bur:Bcep18194_A5992 protein of unknown function DUF1272 YP_001578826.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein YP_001578827.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bam:Bamb_2716 glutathione-dependent formaldehyde-activating, GFA YP_001578828.1 PFAM: glycosyl transferase family 51; KEGG: bch:Bcen2424_2662 glycosyl transferase, family 51 YP_001578830.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_A5987 cupin domain protein YP_001578831.1 PFAM: ThiJ/PfpI domain protein; KEGG: bam:Bamb_2705 ThiJ/PfpI domain protein YP_001578832.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A5985 transcriptional regulator, AraC family YP_001578833.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2703 transcriptional regulator, LysR family YP_001578834.1 KEGG: bpl:BURPS1106A_3672 GP31 YP_001578835.1 PFAM: VRR-NUC domain protein; KEGG: bps:BPSS1058 bacteriophage GP30 protein YP_001578836.1 KEGG: bps:BPSS1057 bacteriophage GP29 protein YP_001578837.1 PFAM: plasmid recombination protein; KEGG: bvi:Bcep1808_2768 plasmid recombination enzyme YP_001578838.1 PFAM: integrase family protein; KEGG: bvi:Bcep1808_2767 phage integrase family protein YP_001578839.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5982 major facilitator superfamily (MFS_1) transporter YP_001578840.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_A5981 periplasmic sensor signal transduction histidine kinase YP_001578841.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_2653 two component transcriptional regulator, winged helix family YP_001578842.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_001578843.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_001578844.1 KEGG: bur:Bcep18194_A5977 hypothetical protein YP_001578845.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001578846.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001578847.1 PFAM: Integral membrane protein TerC; KEGG: bur:Bcep18194_A5974 integral membrane protein TerC YP_001578848.1 KEGG: bvi:Bcep1808_2757 general secretion pathway protein H YP_001578849.1 PFAM: O-antigen polymerase; KEGG: bch:Bcen2424_2645 O-antigen polymerase YP_001578851.1 TIGRFAM: TonB family protein; KEGG: bur:Bcep18194_A5971 TonB-like protein YP_001578852.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_001578853.1 PFAM: peptidase M48 Ste24p; KEGG: bch:Bcen2424_2637 peptidase M48, Ste24p YP_001578854.1 KEGG: bur:Bcep18194_A5967 hypothetical protein YP_001578855.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_2635 alpha/beta hydrolase fold YP_001578856.1 KEGG: bvi:Bcep1808_2749 hypothetical protein YP_001578857.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: bvi:Bcep1808_2748 lipopolysaccharide heptosyltransferase II YP_001578858.1 KEGG: bch:Bcen2424_2632 hypothetical protein YP_001578859.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001578860.1 PFAM: AzlC family protein; KEGG: bur:Bcep18194_A5961 AzlC-like efflux pump YP_001578861.1 PFAM: branched-chain amino acid transport; KEGG: bch:Bcen2424_2629 branched-chain amino acid transport YP_001578862.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001578863.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001578864.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001578865.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001578866.1 KEGG: bur:Bcep18194_A5955 phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001578867.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_001578868.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: bur:Bcep18194_A5953 SUA5/YciO/YrdC/YwlC YP_001578869.1 KEGG: bur:Bcep18194_A5952 phospholipase/lecithinase/hemolysin-like YP_001578870.1 PFAM: fatty acid hydroxylase; KEGG: bur:Bcep18194_A5951 sterol desaturase-like YP_001578871.1 KEGG: bam:Bamb_2666 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_001578872.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A5949 two component transcriptional regulator, winged helix family YP_001578873.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5948 periplasmic sensor signal transduction histidine kinase YP_001578874.1 KEGG: bur:Bcep18194_A5947 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001578875.1 KEGG: bvi:Bcep1808_2730 hypothetical protein YP_001578876.1 PFAM: protein of unknown function DUF427; KEGG: bch:Bcen2424_2614 protein of unknown function DUF427 YP_001578877.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bur:Bcep18194_A5944 carbon monoxide dehydrogenase subunit G YP_001578878.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_A5943 transcriptional regulator, AraC family YP_001578879.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bch:Bcen2424_2610 transcriptional regulator, TetR family YP_001578880.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_2609 efflux transporter, RND family, MFP subunit YP_001578881.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bam:Bamb_2655 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001578882.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_2654 RND efflux system, outer membrane lipoprotein, NodT family YP_001578883.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bam:Bamb_2653 uracil-xanthine permease YP_001578884.1 PFAM: carbohydrate kinase FGGY; KEGG: bch:Bcen2424_2605 carbohydrate kinase, FGGY YP_001578885.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_2604 alcohol dehydrogenase, zinc-binding domain protein YP_001578886.1 KEGG: bch:Bcen2424_2603 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase YP_001578887.1 PFAM: ABC-3 protein; KEGG: bur:Bcep18194_A5933 ABC heavy metal transporter, inner membrane subunit YP_001578888.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_2601 ABC transporter related YP_001578889.1 PFAM: periplasmic solute binding protein; KEGG: bur:Bcep18194_A5931 ABC heavy metal transporter, periplasmic ligand binding protein YP_001578890.1 PFAM: ferric-uptake regulator; KEGG: bch:Bcen2424_2599 ferric uptake regulator, Fur family YP_001578891.1 Converts D-sorbitol to L-sorbose YP_001578892.1 PFAM: PfkB domain protein; KEGG: bch:Bcen2424_2597 PfkB domain protein YP_001578893.1 KEGG: bam:Bamb_2644 tagatose-6-phosphate kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_001578894.1 PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_2595 extracellular solute-binding protein, family 1 YP_001578895.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_2594 binding-protein-dependent transport systems inner membrane component YP_001578896.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_2593 binding-protein-dependent transport systems inner membrane component YP_001578897.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bch:Bcen2424_2592 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001578898.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5922 ABC sugar transporter, fused ATPase subunits YP_001578899.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2590 transcriptional regulator, LysR family YP_001578900.1 PFAM: beta-lactamase; KEGG: bch:Bcen2424_2589 beta-lactamase YP_001578901.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2636 major facilitator superfamily MFS_1 YP_001578902.1 PFAM: putative sugar-binding domain protein; KEGG: bvi:Bcep1808_2704 transcriptional regulator, DeoR family YP_001578903.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bvi:Bcep1808_2703 xylulokinase YP_001578904.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bur:Bcep18194_A5916 mannitol dehydrogenase YP_001578905.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2584 transcriptional regulator, LysR family YP_001578906.1 catalyzes the formation of benzaldehyde from benzoylformate YP_001578907.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A5913 aldehyde dehydrogenase YP_001578908.1 KEGG: bch:Bcen2424_2581 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001578909.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5911 major facilitator superfamily (MFS_1) transporter YP_001578910.1 TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: bam:Bamb_2627 tryptophan 2,3-dioxygenase YP_001578911.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: bam:Bamb_2626 kynureninase YP_001578912.1 TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: bur:Bcep18194_A5908 putative cyclase YP_001578913.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bvi:Bcep1808_2698 putative transcriptional regulator, AsnC family YP_001578914.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bur:Bcep18194_A5906 flavin reductase-like, FMN-binding YP_001578915.1 KEGG: bur:Bcep18194_A5905 hypothetical protein YP_001578916.1 PFAM: selenium-binding protein; KEGG: bch:Bcen2424_2573 selenium-binding protein YP_001578917.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bur:Bcep18194_A5903 protein-methionine-S-oxide reductase YP_001578918.1 PFAM: protein of unknown function DUF72; KEGG: bvi:Bcep1808_2664 protein of unknown function DUF72 YP_001578919.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_2569 cyclopropane-fatty-acyl-phospholipid synthase YP_001578920.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate YP_001578921.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bam:Bamb_2615 UBA/ThiF-type NAD/FAD binding protein YP_001578922.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bch:Bcen2424_2566 thioredoxin YP_001578923.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A5897 pirin-like protein YP_001578924.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5896 protein of unknown function DUF6, transmembrane YP_001578925.1 PFAM: cell wall hydrolase/autolysin; KEGG: bvi:Bcep1808_2656 N-acetylmuramoyl-L-alanine amidase YP_001578926.1 PFAM: protein of unknown function UPF0079; KEGG: bur:Bcep18194_A5894 protein of unknown function UPF0079 YP_001578927.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bcn:Bcen_1950 4Fe-4S cluster binding YP_001578928.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bur:Bcep18194_A5892 methylated-DNA-(protein)-cysteine S-methyltransferase YP_001578929.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001578930.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bam:Bamb_2606 AMP-dependent synthetase and ligase YP_001578931.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bch:Bcen2424_2557 YbaK/EbsC protein YP_001578932.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_001578933.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_001578934.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_001578935.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_001578936.1 KEGG: bvi:Bcep1808_2645 hypothetical protein YP_001578937.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001578938.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: bch:Bcen2424_2550 integral membrane protein MviN YP_001578939.1 KEGG: bch:Bcen2424_2549 hypothetical protein YP_001578940.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001578941.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_001578942.1 PFAM: protein of unknown function DUF343; KEGG: bur:Bcep18194_A5877 putative tetraacyldisaccharide 4'-kinase YP_001578943.1 Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate YP_001578944.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_001578945.1 PFAM: manganese and iron superoxide dismutase; KEGG: bvi:Bcep1808_2636 superoxide dismutase YP_001578946.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bch:Bcen2424_2542 chromate transporter, chromate ion transporter (CHR) family YP_001578947.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bur:Bcep18194_A5872 transcriptional regulator, Crp/Fnr family YP_001578948.1 PFAM: protein of unknown function DUF962; KEGG: bam:Bamb_2588 protein of unknown function DUF962 YP_001578949.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5869 hypothetical protein YP_001578950.1 PFAM: EAL domain protein; KEGG: bch:Bcen2424_2537 diguanylate phosphodiesterase YP_001578951.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5867 drug resistance transporter EmrB/QacA subfamily YP_001578952.1 KEGG: bch:Bcen2424_2535 hypothetical protein YP_001578953.1 PFAM: regulatory protein MerR; Citrate synthase; KEGG: bch:Bcen2424_2534 citrate synthase YP_001578954.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bch:Bcen2424_2533 L-carnitine dehydratase/bile acid-inducible protein F YP_001578955.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_2580 transcriptional regulator, GntR family YP_001578956.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A5863 aldo/keto reductase YP_001578957.1 TIGRFAM: high-affinity nickel-transporter; KEGG: bch:Bcen2424_2529 high-affinity nickel-transporter YP_001578958.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001578959.1 PFAM: protein of unknown function DUF192; KEGG: bvi:Bcep1808_2604 protein of unknown function DUF192 YP_001578960.1 KEGG: bam:Bamb_2574 hypothetical protein YP_001578961.1 PFAM: pseudouridine synthase; KEGG: bam:Bamb_2573 pseudouridine synthase, Rsu YP_001578962.1 Converts isocitrate to alpha ketoglutarate YP_001578963.1 KEGG: bch:Bcen2424_2523 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_001578964.1 KEGG: bur:Bcep18194_A5854 hypothetical protein YP_001578965.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bur:Bcep18194_A5853 multicopper oxidase, type 3 YP_001578966.1 PFAM: YadA domain protein; Hep_Hag repeat-containing protein; KEGG: bte:BTH_II0112 Hep_Hag family YP_001578967.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bvi:Bcep1808_2598 putative cold-shock DNA-binding domain protein YP_001578968.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_001578969.1 KEGG: bam:Bamb_2566 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001578970.1 PFAM: amino acid permease-associated region; KEGG: bcn:Bcen_1906 amino acid permease-associated region YP_001578971.1 PFAM: protein of unknown function DUF347; KEGG: bur:Bcep18194_A5848 protein of unknown function DUF347 YP_001578972.1 catalyzes the formation of dUMP from dUTP YP_001578973.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine YP_001578974.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001578975.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_001578976.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_001578977.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_001578978.1 PFAM: Fmu (Sun) domain protein; KEGG: bvi:Bcep1808_2587 Fmu (Sun) domain protein YP_001578979.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bam:Bamb_2555 MscS mechanosensitive ion channel YP_001578980.1 PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_2507 fatty acid desaturase YP_001578981.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001578982.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_001578983.1 catalyzes the formation of oxaloacetate from L-aspartate YP_001578984.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001578985.1 required for 70S ribosome assembly YP_001578986.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_001578987.1 KEGG: bch:Bcen2424_2499 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_001578988.1 KEGG: bam:Bamb_2545 hypothetical protein YP_001578989.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_2497 inner-membrane translocator YP_001578990.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_2496 inner-membrane translocator YP_001578991.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_2573 ABC transporter related YP_001578992.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I0788 branched-chain amino acid ABC transporter, ATP-binding protein YP_001578994.1 KEGG: bch:Bcen2424_2493 hypothetical protein YP_001578995.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_2492 GCN5-related N-acetyltransferase YP_001578996.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_001578997.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose YP_001578998.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A5821 NAD-dependent epimerase/dehydratase YP_001578999.1 KEGG: bvi:Bcep1808_2566 hypothetical protein YP_001579000.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bch:Bcen2424_2487 pseudouridine synthase, Rsu YP_001579001.1 PFAM: copper resistance protein CopC; KEGG: bch:Bcen2424_2486 copper resistance protein CopC YP_001579002.1 KEGG: bur:Bcep18194_A5817 hypothetical protein YP_001579003.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_2533 short-chain dehydrogenase/reductase SDR YP_001579004.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2532 transcriptional regulator, LysR family YP_001579005.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5814 transcriptional regulator, LysR family YP_001579006.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5813 alpha/beta hydrolase YP_001579007.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_2479 short-chain dehydrogenase/reductase SDR YP_001579008.1 KEGG: bur:Bcep18194_A5808 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001579009.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2525 transcriptional regulator, LysR family YP_001579010.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bch:Bcen2424_2475 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein YP_001579011.1 PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_2557 uncharacterised conserved protein UCP030820 YP_001579012.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_001579013.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001579014.1 KEGG: bvi:Bcep1808_2554 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_001579015.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 YP_001579016.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bvi:Bcep1808_2552 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001579017.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bur:Bcep18194_A5799 YjgP/YjgQ like transporter YP_001579018.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bch:Bcen2424_2467 permease YjgP/YjgQ family protein YP_001579019.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_001579020.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB YP_001579021.1 KEGG: bch:Bcen2424_2464 hypothetical protein YP_001579022.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_2463 cytochrome c, class I YP_001579023.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001579024.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2461 transcriptional regulator, LysR family YP_001579025.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_001579026.1 PFAM: protein of unknown function DUF541; KEGG: bch:Bcen2424_2459 protein of unknown function DUF541 YP_001579027.1 PFAM: protein of unknown function DUF55; KEGG: bam:Bamb_2507 protein of unknown function DUF55 YP_001579028.1 PFAM: protein of unknown function DUF710; KEGG: bvi:Bcep1808_2541 protein of unknown function DUF710 YP_001579029.1 KEGG: bam:Bamb_2505 hypothetical protein YP_001579030.1 PFAM: transport system permease protein; KEGG: bch:Bcen2424_2455 transport system permease protein YP_001579031.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5785 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit YP_001579032.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_001579033.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole YP_001579034.1 TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A5782 phosphoglycerate/bisphosphoglycerate mutase YP_001579035.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A5781 ABC Fe3+siderophore/cobalamin transporter, periplasmic ligand binding protein YP_001579036.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase YP_001579037.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_001579038.1 PFAM: cobalbumin biosynthesis protein; KEGG: bur:Bcep18194_A5778 cobalbumin biosynthesis enzyme YP_001579039.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_001579040.1 PFAM: DoxX family protein; KEGG: bch:Bcen2424_2445 DoxX family protein YP_001579041.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bch:Bcen2424_2444 cobyrinic acid a,c-diamide synthase YP_001579042.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_001579043.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001579044.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bch:Bcen2424_2441 chromosome segregation and condensation protein ScpA YP_001579045.1 KEGG: bvi:Bcep1808_2524 hypothetical protein YP_001579046.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bur:Bcep18194_A5770 surface antigen (D15) YP_001579047.1 PFAM: protein of unknown function DUF490; KEGG: bur:Bcep18194_A5769 protein of unknown function DUF490 YP_001579048.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_001579049.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: bch:Bcen2424_2436 OmpA/MotB domain protein YP_001579050.1 PFAM: Cobyrinic acid ac-diamide synthase; protein of unknown function DUF59; KEGG: bam:Bamb_2482 cobyrinic acid a,c-diamide synthase YP_001579051.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: bch:Bcen2424_2434 superoxide dismutase, copper/zinc binding YP_001579052.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_001579053.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bch:Bcen2424_2432 lysine decarboxylase YP_001579054.1 KEGG: bur:Bcep18194_A5762 hypothetical protein YP_001579055.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bvi:Bcep1808_2514 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001579056.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001579057.1 SMART: helix-turn-helix domain protein; KEGG: bam:Bamb_2471 transcriptional regulator, XRE family YP_001579058.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5754 UbiE/COQ5 methyltransferase YP_001579059.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_001579060.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_001579061.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis YP_001579062.1 PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_A5750 HemY-like protein YP_001579063.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2420 major facilitator superfamily MFS_1 YP_001579064.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001579065.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_2418 aldehyde dehydrogenase (NAD(+)) YP_001579066.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001579067.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: bpm:BURPS1710b_1238 endo/excinuclease domain protein YP_001579068.1 PFAM: protein of unknown function DUF482; KEGG: bch:Bcen2424_2413 protein of unknown function DUF482 YP_001579069.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001579070.1 PFAM: nitrogen regulatory protein P-II; KEGG: bvi:Bcep1808_2499 nitrogen regulatory protein P-II YP_001579071.1 KEGG: bam:Bamb_2455 outer membrane protein (porin)-like protein YP_001579072.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2409 transcriptional regulator, LysR family YP_001579073.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_2453 GCN5-related N-acetyltransferase YP_001579074.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_2495 ABC transporter related YP_001579075.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5733 ABC amino acid transporter, inner membrane subunit YP_001579076.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_2405 polar amino acid ABC transporter, inner membrane subunit YP_001579077.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_2449 cationic amino acid ABC transporter, periplasmic binding protein YP_001579078.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A5730 pirin-like protein YP_001579079.1 KEGG: bam:Bamb_2447 hypothetical protein YP_001579080.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A5728 two component transcriptional regulator, winged helix family YP_001579081.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_2400 periplasmic sensor signal transduction histidine kinase YP_001579082.1 KEGG: bch:Bcen2424_2399 hypothetical protein YP_001579083.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5725 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001579084.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2442 ABC transporter related YP_001579085.1 KEGG: bam:Bamb_2441 hypothetical protein YP_001579086.1 KEGG: bur:Bcep18194_A5721 hypothetical protein YP_001579087.1 KEGG: bur:Bcep18194_A5720 hypothetical protein YP_001579088.1 KEGG: bch:Bcen2424_2393 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001579089.1 KEGG: bur:Bcep18194_A5718 ATPase-like YP_001579090.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2391 major facilitator superfamily MFS_1 YP_001579091.1 KEGG: bur:Bcep18194_A5716 hypothetical protein YP_001579092.1 KEGG: bur:Bcep18194_A5715 hypothetical protein YP_001579093.1 KEGG: bam:Bamb_2433 hypothetical protein YP_001579094.1 serine protease inhibitor, inhibits trypsin and other proteases YP_001579095.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A5712 transcriptional regulator, TetR family YP_001579096.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_2430 short-chain dehydrogenase/reductase SDR YP_001579097.1 KEGG: bxe:Bxe_C1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Erythromycin esterase YP_001579098.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_0661 short-chain dehydrogenase/reductase SDR YP_001579100.1 PFAM: transposase mutator type; KEGG: bte:BTH_II0431 transposase, mutator family YP_001579101.1 KEGG: pin:Ping_2306 hypothetical protein YP_001579102.1 KEGG: bch:Bcen2424_2374 resolvase, N-terminal domain YP_001579104.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bur:Bcep18194_A5702 rubredoxin-type Fe(Cys)4 protein YP_001579105.1 KEGG: bch:Bcen2424_2362 hypothetical protein YP_001579106.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_2361 ABC transporter related YP_001579107.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001579108.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001579109.1 KEGG: bch:Bcen2424_2358 integral membrane protein-like protein YP_001579110.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2357 transcriptional regulator, LysR family YP_001579111.1 PFAM: transmembrane pair domain protein; KEGG: bch:Bcen2424_2356 transmembrane pair domain protein YP_001579112.1 PFAM: Chromate transporter; KEGG: bvi:Bcep1808_2442 chromate transporter YP_001579113.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bch:Bcen2424_2354 diguanylate cyclase/phosphodiesterase YP_001579114.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bvi:Bcep1808_2440 phenazine biosynthesis protein PhzF family YP_001579115.1 PFAM: Endoribonuclease L-PSP; KEGG: bvi:Bcep1808_2439 endoribonuclease L-PSP YP_001579116.1 PFAM: aminotransferase class I and II; KEGG: bam:Bamb_2387 aminotransferase, class I and II YP_001579117.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5689 protein of unknown function DUF6, transmembrane YP_001579118.1 KEGG: bch:Bcen2424_2349 hypothetical protein YP_001579119.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_2384 transcriptional regulator, GntR family YP_001579120.1 molecular chaperone YP_001579121.1 PFAM: Chorismate lyase; KEGG: bur:Bcep18194_A5685 chorismate lyase YP_001579122.1 KEGG: reh:H16_A2653 G:T/U mismatch-specific DNA glycosylase YP_001579123.1 SMART: helix-turn-helix domain protein; KEGG: bam:Bamb_2380 transcriptional regulator, XRE family YP_001579124.1 PFAM: protein of unknown function DUF891; KEGG: pol:Bpro_2509 protein of unknown function DUF891 YP_001579125.1 KEGG: bur:Bcep18194_A5683 hypothetical protein YP_001579126.1 KEGG: bch:Bcen2424_2339 spermidine synthase-like protein YP_001579127.1 KEGG: bur:Bcep18194_A5681 hypothetical protein YP_001579128.1 PFAM: Na+/solute symporter; KEGG: bvi:Bcep1808_2427 Na+/solute symporter YP_001579129.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bch:Bcen2424_2336 glyoxalase/bleomycin resistance protein/dioxygenase YP_001579130.1 KEGG: bvi:Bcep1808_2425 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_001579131.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bam:Bamb_2373 benzoate transporter YP_001579132.1 PFAM: VWA containing CoxE family protein; KEGG: bur:Bcep18194_A5675 hypothetical protein YP_001579133.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_2371 ATPase associated with various cellular activities, AAA_5 YP_001579134.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_2421 cytochrome c, class I YP_001579135.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_2330 cytochrome c, class I YP_001579136.1 PFAM: Domain of unknown function DUF1841; KEGG: bch:Bcen2424_2329 hypothetical protein YP_001579137.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: bch:Bcen2424_2328 protein of unknown function DUF6, transmembrane YP_001579138.1 KEGG: bam:Bamb_2366 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein YP_001579139.1 Involved in the electron transport chain YP_001579140.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_2364 transcriptional regulator, TetR family YP_001579141.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bvi:Bcep1808_2413 polyhydroxyalkanoate depolymerase, intracellular YP_001579142.1 PFAM: glycoside hydrolase 15-related; KEGG: bvi:Bcep1808_2412 glycoside hydrolase 15-related YP_001579143.1 KEGG: bch:Bcen2424_2322 3-carboxymuconate cyclase-like protein YP_001579144.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5663 cell division FtsK/SpoIIIE YP_001579145.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bam:Bamb_2359 protein of unknown function DUF306, MetA and HslJ YP_001579146.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_001579147.1 KEGG: bur:Bcep18194_A5660 hypothetical protein YP_001579148.1 KEGG: bur:Bcep18194_A5659 periplasmic protein YP_001579149.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bur:Bcep18194_A5658 DEAD/DEAH box helicase-like YP_001579150.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu YP_001579151.1 PFAM: Rhodanese domain protein; KEGG: bcn:Bcen_1702 rhodanese-like YP_001579152.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_001579153.1 TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; KEGG: bvi:Bcep1808_2400 glycosyl transferase, family 9 YP_001579154.1 PFAM: glycosyl transferase family 2; KEGG: rso:RSc2203 hypothetical protein YP_001579155.1 KEGG: bba:Bd1672 putative N-acetylglucosaminyltransferase YP_001579156.1 PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3291 putative LPS biosynthesis-related protein YP_001579157.1 PFAM: O-antigen polymerase; KEGG: rso:RSc2204 probable transmembrane protein YP_001579158.1 KEGG: cac:CA_P0044 hypothetical protein YP_001579159.1 KEGG: bvi:Bcep1808_2396 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001579160.1 KEGG: bch:Bcen2424_2306 integral membrane protein-like protein YP_001579161.1 KEGG: bch:Bcen2424_2305 membrane protein-like protein YP_001579162.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5646 major facilitator superfamily (MFS_1) transporter YP_001579163.1 KEGG: bur:Bcep18194_A5645 hypothetical protein YP_001579164.1 PFAM: protein of unknown function DUF469; KEGG: bam:Bamb_2340 protein of unknown function DUF469 YP_001579165.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bch:Bcen2424_2301 ribonuclease, Rne/Rng family YP_001579166.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_001579167.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001579168.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bch:Bcen2424_2298 iojap-like protein YP_001579169.1 catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP YP_001579170.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001579171.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_001579172.1 PFAM: protein of unknown function DUF28; KEGG: bmn:BMA10247_0358 conserved hypothetical protein TIGR01033 YP_001579173.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_001579174.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A5619 short-chain dehydrogenase/reductase SDR YP_001579175.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_001579176.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_2290 alcohol dehydrogenase, zinc-binding domain protein YP_001579177.1 KEGG: bvi:Bcep1808_2374 hypothetical protein YP_001579178.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001579179.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001579180.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex YP_001579181.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bch:Bcen2424_2285 osmosensitive K+ channel signal transduction histidine kinase YP_001579182.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_2322 two component transcriptional regulator, winged helix family YP_001579183.1 PFAM: protein of unknown function DUF333; KEGG: bch:Bcen2424_2283 protein of unknown function DUF333 YP_001579184.1 PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A5609 small multidrug resistance protein YP_001579185.1 KEGG: bam:Bamb_2319 hypothetical protein YP_001579186.1 PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A5607 protein of unknown function DUF214 YP_001579187.1 PFAM: globin; KEGG: bam:Bamb_2317 globin YP_001579188.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: bur:Bcep18194_A5605 alanyl-transfer RNA synthetase YP_001579189.1 PFAM: protein of unknown function DUF924; KEGG: bam:Bamb_2315 protein of unknown function DUF924 YP_001579190.1 KEGG: bch:Bcen2424_2276 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_001579191.1 Converts glucose to D-glucono-1,5 lactone YP_001579192.1 PFAM: conserved hypothetical protein; KEGG: bch:Bcen2424_2274 conserved hypothetical protein 730 YP_001579193.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_2311 transcriptional regulator, TetR family YP_001579194.1 PFAM: diacylglycerol kinase; KEGG: bcn:Bcen_1660 diacylglycerol kinase YP_001579195.1 PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_2271 glycosyl transferase, group 1 YP_001579196.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_2308 metallophosphoesterase YP_001579197.1 PFAM: RDD domain containing protein; KEGG: bur:Bcep18194_A5596 RDD family protein YP_001579198.1 KEGG: bur:Bcep18194_A5595 hypothetical protein YP_001579199.1 KEGG: bvi:Bcep1808_2351 hypothetical protein YP_001579200.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_001579201.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_001579202.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_001579203.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001579204.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine YP_001579205.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bch:Bcen2424_2261 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001579206.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001579207.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bch:Bcen2424_2258 sulphate transporter YP_001579208.1 PFAM: carbonic anhydrase; KEGG: bch:Bcen2424_2257 carbonate dehydratase YP_001579209.1 KEGG: bam:Bamb_2294 hypothetical protein YP_001579210.1 KEGG: bch:Bcen2424_2255 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001579211.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001579212.1 KEGG: bpd:BURPS668_1285 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001579213.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_A5580 zinc-containing alcohol dehydrogenase superfamily YP_001579214.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_001579215.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bur:Bcep18194_A5578 protein-export membrane protein YP_001579216.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579217.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001579218.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579219.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579220.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579221.1 KEGG: bur:Bcep18194_A5572 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_001579222.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001579223.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579224.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579225.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579226.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579227.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001579228.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579229.1 Catalyzes the transfer of electrons from NADH to quinone YP_001579230.1 KEGG: bvi:Bcep1808_2320 hypothetical protein YP_001579231.1 PFAM: NUDIX hydrolase; KEGG: bch:Bcen2424_2234 NUDIX hydrolase YP_001579232.1 PFAM: protein of unknown function DUF1178; KEGG: bam:Bamb_2271 protein of unknown function DUF1178 YP_001579233.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bam:Bamb_2270 acyl-CoA dehydrogenase domain protein YP_001579234.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bam:Bamb_2269 acyl-CoA dehydrogenase domain protein YP_001579235.1 PFAM: MaoC domain protein dehydratase; KEGG: bur:Bcep18194_A5558 MaoC-like dehydratase YP_001579236.1 PFAM: MaoC domain protein dehydratase; KEGG: bch:Bcen2424_2229 MaoC domain protein dehydratase YP_001579237.1 PFAM: Glutathione S-transferase domain; KEGG: bch:Bcen2424_2228 glutathione S-transferase, N-terminal domain YP_001579238.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001579239.1 KEGG: bam:Bamb_2264 glutathione S-transferase-like protein YP_001579240.1 catalyzes the transfer of an amino moiety YP_001579241.1 KEGG: bch:Bcen2424_2224 protein of unknown function DUF132 YP_001579242.1 PFAM: protein of unknown function DUF328; KEGG: bvi:Bcep1808_2308 protein of unknown function DUF328 YP_001579243.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: bch:Bcen2424_2222 peptidase M14, carboxypeptidase A YP_001579244.1 KEGG: bvi:Bcep1808_2306 hypothetical protein YP_001579245.1 KEGG: bch:Bcen2424_2220 membrane protein-like protein YP_001579246.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_A5547 two component transcriptional regulator, LuxR family YP_001579247.1 KEGG: bvi:Bcep1808_2303 hypothetical protein YP_001579248.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bvi:Bcep1808_2302 putative transcriptional regulator, MerR family YP_001579249.1 KEGG: bam:Bamb_2254 hypothetical protein YP_001579250.1 KEGG: bur:Bcep18194_A5543 hypothetical protein YP_001579251.1 PFAM: protein of unknown function DUF519; KEGG: bur:Bcep18194_A5542 protein of unknown function DUF519 YP_001579252.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_2251 aldo/keto reductase YP_001579253.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_001579254.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001579255.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001579256.1 KEGG: bam:Bamb_2247 uncharacterized protein probably involved in high-affinity Fe2+ transport YP_001579257.1 KEGG: bam:Bamb_2246 hypothetical protein YP_001579258.1 PFAM: iron permease FTR1; KEGG: bur:Bcep18194_A5535 iron permease FTR1 YP_001579259.1 KEGG: bam:Bamb_2244 polyferredoxin-like protein YP_001579260.1 KEGG: bch:Bcen2424_2204 hypothetical protein YP_001579261.1 PFAM: Domain of unknown function DUF1857; KEGG: bur:Bcep18194_A5532 hypothetical protein YP_001579262.1 PFAM: Pirin domain protein; KEGG: bur:Bcep18194_A5531 pirin-like protein YP_001579263.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5530 transcriptional regulator, LysR family YP_001579264.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bam:Bamb_2239 biopolymer transport protein ExbD/TolR YP_001579265.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bvi:Bcep1808_2285 MotA/TolQ/ExbB proton channel YP_001579266.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bch:Bcen2424_2198 TonB family protein YP_001579267.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_2197 BFD domain protein (2Fe-2S)-binding domain protein YP_001579268.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_001579269.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bpd:BURPS668_A0622 bacterioferritin YP_001579270.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bur:Bcep18194_A5523 Fe-S type hydro-lyase tartrate/fumarate YP_001579271.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5522 hypothetical protein YP_001579272.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bvi:Bcep1808_2278 protein of unknown function DUF6, transmembrane YP_001579273.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001579274.1 KEGG: bur:Bcep18194_A5519 membrane protein-like YP_001579275.1 PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_A5518 Na+/solute symporter YP_001579276.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bch:Bcen2424_2186 TonB-dependent siderophore receptor YP_001579277.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A5502 HAD-superfamily hydrolase subfamily IB, PSPase-like YP_001579278.1 KEGG: bam:Bamb_2221 3-carboxymuconate cyclase-like protein YP_001579279.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5498 major facilitator superfamily (MFS_1) transporter YP_001579280.1 PFAM: phosphoesterase DHHA1; KEGG: bur:Bcep18194_A5491 phosphoesterase, DHHA1 YP_001579281.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2177 major facilitator superfamily MFS_1 YP_001579282.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5486 transcriptional regulator, LysR family YP_001579283.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5485 alpha/beta hydrolase YP_001579284.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bur:Bcep18194_A5484 4'-phosphopantetheinyl transferase YP_001579285.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_001579286.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bur:Bcep18194_A5481 transcriptional regulator, histidine utilization repressor, GntR family YP_001579287.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_001579288.1 PFAM: protein of unknown function DUF886; KEGG: bch:Bcen2424_2169 protein of unknown function DUF886 YP_001579289.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_001579290.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate YP_001579291.1 PFAM: N-formylglutamate amidohydrolase; KEGG: bur:Bcep18194_A5476 N-formylglutamate deformylase YP_001579292.1 KEGG: bur:Bcep18194_A5475 hypothetical protein YP_001579293.1 PFAM: peptidase C26; KEGG: bch:Bcen2424_2164 peptidase C26 YP_001579294.1 PFAM: glutamine synthetase catalytic region; KEGG: bam:Bamb_2201 glutamate--ammonia ligase YP_001579295.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_2200 aminotransferase class-III YP_001579296.1 PFAM: adenylylsulfate kinase; KEGG: bur:Bcep18194_A5471 adenylylsulfate kinase YP_001579297.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2198 transcriptional regulator, LysR family YP_001579298.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_A5469 acyl-CoA dehydrogenase YP_001579299.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5468 L-carnitine dehydratase/bile acid-inducible protein F YP_001579300.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_2158 major facilitator superfamily MFS_1 YP_001579301.1 PFAM: Fe(II) trafficking protein YggX; KEGG: bch:Bcen2424_2157 Fe(II) trafficking protein YggX YP_001579302.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis YP_001579303.1 KEGG: bur:Bcep18194_A5464 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases YP_001579304.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; KEGG: bur:Bcep18194_A5463 hypothetical protein YP_001579305.1 PFAM: fatty acid hydroxylase; KEGG: bam:Bamb_2190 sterol desaturase-like protein YP_001579306.1 KEGG: bch:Bcen2424_2152 hypothetical protein YP_001579307.1 PFAM: molybdopterin binding domain; KEGG: bch:Bcen2424_2151 molybdopterin binding domain YP_001579308.1 SMART: Rhodanese domain protein; KEGG: bch:Bcen2424_2150 rhodanese domain protein YP_001579309.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bvi:Bcep1808_2228 glutamine synthetase, type I YP_001579310.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_2148 signal transduction histidine kinase, nitrogen specific, NtrB YP_001579311.1 KEGG: bch:Bcen2424_2147 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001579312.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bur:Bcep18194_A5455 peptidase S9, prolyl oligopeptidase active site region YP_001579313.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bvi:Bcep1808_2224 exodeoxyribonuclease III Xth YP_001579314.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bch:Bcen2424_2143 aspartate racemase YP_001579315.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001579316.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bam:Bamb_2178 oligopeptidase A YP_001579317.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001579318.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_2219 response regulator receiver protein YP_001579319.1 KEGG: bvi:Bcep1808_2218 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001579320.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001579321.1 KEGG: bam:Bamb_2173 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_001579322.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bte:BTH_I1866 pyruvate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase YP_001579323.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bur:Bcep18194_A5440 phasin YP_001579324.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bch:Bcen2424_2133 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_001579325.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bvi:Bcep1808_2211 regulatory proteins, IclR YP_001579326.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bam:Bamb_2168 protein of unknown function DUF224, cysteine-rich region domain protein YP_001579327.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF162; KEGG: bur:Bcep18194_A5436 4Fe-4S ferredoxin, iron-sulfur binding YP_001579328.1 KEGG: bur:Bcep18194_A5435 hypothetical protein YP_001579329.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bam:Bamb_2165 protein tyrosine phosphatase YP_001579330.1 TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: bch:Bcen2424_2127 transcriptional regulator, BadM/Rrf2 family YP_001579331.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_001579332.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: bvi:Bcep1808_2204 FeS cluster assembly scaffold IscU YP_001579333.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: bvi:Bcep1808_2203 iron-sulfur cluster assembly protein IscA YP_001579334.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins YP_001579335.1 involved in the maturation of iron-sulfur cluster-containing proteins YP_001579336.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: bch:Bcen2424_2121 ferredoxin, 2Fe-2S type, ISC system YP_001579337.1 TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: bch:Bcen2424_2120 protein of unknown function DUF528 YP_001579338.1 PFAM: 17 kDa surface antigen; KEGG: bam:Bamb_2156 17 kDa surface antigen YP_001579339.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_001579340.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: bpd:BURPS668_2590 peptide chain release factor 2, programmed YP_001579341.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bam:Bamb_2153 single-stranded-DNA-specific exonuclease RecJ YP_001579342.1 KEGG: bch:Bcen2424_2115 hypothetical protein YP_001579343.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bch:Bcen2424_2114 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001579344.1 KEGG: bur:Bcep18194_A5419 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_001579345.1 PFAM: TatD-related deoxyribonuclease; KEGG: bur:Bcep18194_A5418 TatD-related deoxyribonuclease YP_001579346.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: bch:Bcen2424_2111 DNA internalization-related competence protein ComEC/Rec2 YP_001579347.1 KEGG: bch:Bcen2424_2110 hypothetical protein YP_001579348.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001579349.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001579350.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001579351.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein YP_001579352.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001579353.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001579354.1 KEGG: bam:Bamb_2714 integrase, catalytic region YP_001579355.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001579356.1 KEGG: bam:Bamb_2142 hypothetical protein YP_001579357.1 PFAM: Hsp33 protein; KEGG: bam:Bamb_2141 HSP33 protein YP_001579358.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: bvi:Bcep1808_2182 transferase hexapeptide repeat containing protein YP_001579359.1 PFAM: protein of unknown function DUF455; KEGG: bch:Bcen2424_2102 protein of unknown function DUF455 YP_001579360.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_2101 alpha/beta hydrolase fold YP_001579361.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bur:Bcep18194_A5406 PHP-like metal-dependent phosphoesterase YP_001579362.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: bch:Bcen2424_2099 SUA5/YciO/YrdC/YwlC family protein YP_001579363.1 PFAM: peptidase M50; KEGG: bam:Bamb_2135 peptidase M50 YP_001579364.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001579365.1 PFAM: Methyltransferase type 11; KEGG: bam:Bamb_2133 methyltransferase type 12 YP_001579366.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001579367.1 KEGG: bch:Bcen2424_2094 uncharacterized lipoprotein YP_001579368.1 PFAM: beta-lactamase domain protein; KEGG: bam:Bamb_2130 beta-lactamase domain protein YP_001579369.1 KEGG: bam:Bamb_2129 hypothetical protein YP_001579370.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: bch:Bcen2424_2091 cupin 4 family protein YP_001579371.1 KEGG: bte:BTH_I1911 FKBP-type peptidyl-prolyl cis-trans isomerase 2 YP_001579372.1 KEGG: bch:Bcen2424_2089 hypothetical protein YP_001579373.1 This protein performs the mismatch recognition step during the DNA repair process YP_001579374.1 KEGG: bpm:BURPS1710b_2499 hypothetical protein YP_001579375.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_6264 transposase IS116/IS110/IS902 family protein YP_001579376.1 KEGG: bps:BPSL2088 hypothetical protein YP_001579377.1 KEGG: bps:BPSL2087A hypothetical protein YP_001579378.1 KEGG: bam:Bamb_1847 hypothetical protein YP_001579379.1 KEGG: bam:Bamb_1846 hypothetical protein YP_001579380.1 PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_1845 PaaR repeat-containing protein YP_001579381.1 PFAM: inositol monophosphatase; KEGG: bch:Bcen2424_2085 inositol monophosphatase YP_001579382.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bch:Bcen2424_2084 RNA methyltransferase, TrmH family, group 1 YP_001579383.1 TIGRFAM: serine O-acetyltransferase; KEGG: bur:Bcep18194_A5389 serine O-acetyltransferase YP_001579384.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine YP_001579385.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bam:Bamb_2116 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001579386.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bch:Bcen2424_2080 peptidylprolyl isomerase YP_001579387.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bam:Bamb_2114 tetratricopeptide TPR_2 repeat protein YP_001579388.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001579389.1 PFAM: HhH-GPD family protein; KEGG: bam:Bamb_2112 HhH-GPD family protein YP_001579390.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_001579391.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: bch:Bcen2424_2075 tRNA(Ile)-lysidine synthetase YP_001579392.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_001579393.1 KEGG: bam:Bamb_2108 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001579394.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bch:Bcen2424_2071 ubiquinol oxidase, subunit II YP_001579395.1 KEGG: bch:Bcen2424_2070 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001579396.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bam:Bamb_2105 cytochrome c oxidase, subunit III YP_001579397.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bur:Bcep18194_A5373 cytochrome c oxidase subunit IV YP_001579398.1 KEGG: bam:Bamb_2095 hypothetical protein YP_001579399.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_A5371 ABC transporter, periplasmic ligand binding protein YP_001579400.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_2093 binding-protein-dependent transport systems inner membrane component YP_001579401.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5369 ABC transporter, inner membrane subunit YP_001579402.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_2091 ABC transporter related YP_001579403.1 PFAM: NLP/P60 protein; KEGG: bam:Bamb_2090 NLP/P60 protein YP_001579404.1 PFAM: Patatin; KEGG: bur:Bcep18194_A5366 patatin YP_001579405.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001579406.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_2055 GCN5-related N-acetyltransferase YP_001579407.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bam:Bamb_2086 transcriptional regulator, AraC family YP_001579408.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_001579409.1 PFAM: AIG2 family protein; KEGG: bam:Bamb_2085 protein of unknown function UPF0131 YP_001579410.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_001579411.1 KEGG: bam:Bamb_2083 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001579412.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2050 transcriptional regulator, LysR family YP_001579413.1 PFAM: UspA domain protein; KEGG: bch:Bcen2424_2049 UspA domain protein YP_001579414.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bch:Bcen2424_2048 isocitrate lyase YP_001579415.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bch:Bcen2424_2047 DEAD/DEAH box helicase domain protein YP_001579416.1 PFAM: acyl-coA-binding protein ACBP; KEGG: bvi:Bcep1808_1952 acyl-coA-binding protein, ACBP YP_001579417.1 PFAM: peptidase M22 glycoprotease; KEGG: bch:Bcen2424_2045 peptidase M22, glycoprotease YP_001579418.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_1950 ribosomal-protein-alanine acetyltransferase YP_001579419.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bch:Bcen2424_2043 phage SPO1 DNA polymerase-related protein YP_001579420.1 PFAM: Domain of unknown function DUF1853; KEGG: bvi:Bcep1808_1948 hypothetical protein YP_001579421.1 KEGG: bur:Bcep18194_A5350 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; Phosphomethylpyrimidine kinase type-1 YP_001579422.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5349 major facilitator superfamily (MFS_1) transporter YP_001579423.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001579424.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001579425.1 KEGG: bur:Bcep18194_A5346 hypothetical protein YP_001579426.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2068 ABC transporter related YP_001579427.1 PFAM: glutathione peroxidase; KEGG: bam:Bamb_2067 glutathione peroxidase YP_001579428.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) YP_001579429.1 involved in methylation of ribosomal protein L3 YP_001579430.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001579431.1 PFAM: arsenate reductase and related; KEGG: bvi:Bcep1808_1937 arsenate reductase and related YP_001579432.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_001579433.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate YP_001579434.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_2027 protein of unknown function DUF6, transmembrane YP_001579435.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bvi:Bcep1808_1933 chromosome segregation protein SMC YP_001579436.1 SMART: ZipA FtsZ-binding region; KEGG: bam:Bamb_2058 hypothetical protein YP_001579437.1 KEGG: bch:Bcen2424_2024 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001579438.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001579439.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bam:Bamb_2055 pseudouridine synthase, Rsu YP_001579440.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001579441.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_001579442.1 PFAM: ribosomal protein S2; KEGG: bte:BTH_I2027 ribosomal protein S2 YP_001579443.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001579444.1 Catalyzes the phosphorylation of UMP to UDP YP_001579445.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001579446.1 KEGG: bch:Bcen2424_2015 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001579447.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bur:Bcep18194_A5324 phosphatidate cytidylyltransferase YP_001579448.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001579449.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: bur:Bcep18194_A5322 peptidase M50, putative membrane-associated zinc metallopeptidase YP_001579450.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bch:Bcen2424_2011 surface antigen (D15) YP_001579451.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: bam:Bamb_2043 outer membrane chaperone Skp (OmpH) YP_001579452.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_001579453.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001579454.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001579455.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001579456.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001579457.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bch:Bcen2424_2004 tRNA/rRNA methyltransferase (SpoU) YP_001579458.1 PFAM: protein of unknown function DUF299; KEGG: bam:Bamb_2036 protein of unknown function DUF299 YP_001579459.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001579460.1 PFAM: protein of unknown function DUF107; KEGG: bch:Bcen2424_2001 protein of unknown function DUF107 YP_001579461.1 PFAM: band 7 protein; KEGG: bvi:Bcep1808_1906 band 7 protein YP_001579462.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001579463.1 PFAM: cyclase/dehydrase; KEGG: bur:Bcep18194_A5308 streptomyces cyclase/dehydrase YP_001579464.1 PFAM: protein of unknown function UPF0125; KEGG: bam:Bamb_2030 protein of unknown function UPF0125 YP_001579465.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_A5306 hypothetical protein YP_001579466.1 KEGG: bam:Bamb_2028 hypothetical protein YP_001579467.1 KEGG: bur:Bcep18194_A5304 hypothetical protein YP_001579468.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bch:Bcen2424_1993 protein of unknown function DUF899, thioredoxin family protein YP_001579469.1 KEGG: bam:Bamb_2025 metal-binding integral membrane protein-like protein YP_001579470.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001579471.1 KEGG: bch:Bcen2424_1990 hypothetical protein YP_001579472.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001579473.1 SMART: helix-turn-helix domain protein; KEGG: ret:RHE_CH02627 putative transcriptional regulator protein YP_001579474.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: sus:Acid_6732 NAD-dependent epimerase/dehydratase YP_001579475.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rso:RSc1443 putative ligase protein YP_001579476.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A5292 NUDIX hydrolase YP_001579477.1 KEGG: bam:Bamb_1963 hypothetical protein YP_001579478.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: bch:Bcen2424_1977 heat domain containing protein YP_001579479.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1976 ABC transporter related YP_001579480.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_1975 binding-protein-dependent transport systems inner membrane component YP_001579481.1 KEGG: bch:Bcen2424_1974 nitrate ABC transporter, periplasmic nitrate-binding protein, putative YP_001579482.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bam:Bamb_1961 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001579483.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_1960 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001579484.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_1959 transcriptional regulator, GntR family YP_001579485.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5285 major facilitator superfamily (MFS_1) transporter YP_001579486.1 KEGG: bam:Bamb_1957 hypothetical protein YP_001579487.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bam:Bamb_1956 CMP/dCMP deaminase, zinc-binding YP_001579488.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine YP_001579489.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_1966 transcriptional regulator, GntR family YP_001579490.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_A5280 permease for cytosine/purines, uracil, thiamine, allantoin transporter YP_001579491.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bvi:Bcep1808_1889 Asp/Glu racemase YP_001579492.1 KEGG: bam:Bamb_1951 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase YP_001579493.1 KEGG: bur:Bcep18194_A5277 hypothetical protein YP_001579494.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_001579495.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001579496.1 PFAM: protein of unknown function DUF989; KEGG: bam:Bamb_1946 protein of unknown function DUF989 YP_001579497.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bur:Bcep18194_A5268 transthyretin YP_001579498.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001579499.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5266 transcriptional regulator, LysR family YP_001579500.1 PFAM: protein of unknown function DUF1458; KEGG: bam:Bamb_1941 protein of unknown function DUF1458 YP_001579501.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bch:Bcen2424_1953 2-hydroxy-3-oxopropionate reductase YP_001579502.1 KEGG: bur:Bcep18194_A5263 hypothetical protein YP_001579503.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_001579504.1 KEGG: bam:Bamb_1937 TPR repeat protein YP_001579505.1 PFAM: PspA/IM30 family protein; KEGG: bch:Bcen2424_1949 phage shock protein A, PspA YP_001579506.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bch:Bcen2424_1948 penicillin-binding protein, 1A family YP_001579508.1 PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_0715 GCN5-related N-acetyltransferase YP_001579509.1 KEGG: bch:Bcen2424_1947 hypothetical protein YP_001579510.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bam:Bamb_1934 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001579511.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001579512.1 KEGG: bam:Bamb_1932 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001579513.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_001579514.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_001579515.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_1929 carboxymuconolactone decarboxylase YP_001579516.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmn:BMA10247_1255 antioxidant, AhpC/Tsa family YP_001579517.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_A5250 periplasmic sensor signal transduction histidine kinase YP_001579518.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation YP_001579519.1 KEGG: bch:Bcen2424_1937 hypothetical protein YP_001579520.1 PFAM: Protein of unknown function DUF1800; KEGG: bch:Bcen2424_1936 hypothetical protein YP_001579521.1 PFAM: protein of unknown function DUF1501; KEGG: bch:Bcen2424_1935 protein of unknown function DUF1501 YP_001579522.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bam:Bamb_1922 squalene/phytoene synthase YP_001579523.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001579524.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_2714 integrase, catalytic region YP_001579525.1 KEGG: bam:Bamb_1920 hypothetical protein YP_001579526.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A5232 histone deacetylase superfamily YP_001579527.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5231 major facilitator superfamily (MFS_1) transporter YP_001579528.1 PFAM: porin Gram-negative type; KEGG: bcn:Bcen_6150 porin, gram-negative type YP_001579529.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A5229 transcriptional regulator, LuxR family YP_001579530.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis YP_001579531.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_1926 transcriptional regulator, MarR family YP_001579532.1 PFAM: glycerate kinase; KEGG: bur:Bcep18194_A5226 glycerate kinase YP_001579533.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001579534.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001579535.1 binds and unfolds substrates as part of the ClpXP protease YP_001579536.1 KEGG: bvi:Bcep1808_1853 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001579537.1 PFAM: porin Gram-negative type; KEGG: bch:Bcen2424_0181 outer membrane protein (porin) YP_001579538.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B1919 MFS transporter, AAHS family YP_001579539.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5221 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001579540.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bam:Bamb_1907 arylesterase YP_001579541.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcn:Bcen_6161 ABC transporter related YP_001579542.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_001579543.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: bch:Bcen2424_1916 carbohydrate kinase, YjeF related protein YP_001579544.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A5216 D-amino-acid dehydrogenase YP_001579545.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001579546.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_1901 GCN5-related N-acetyltransferase YP_001579547.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5213 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001579548.1 PFAM: BolA family protein; KEGG: bvi:Bcep1808_1843 BolA family protein YP_001579549.1 Involved in cell division; probably involved in intracellular septation YP_001579550.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_A5210 protein-methionine-S-oxide reductase YP_001579551.1 PFAM: protein of unknown function UPF0061; KEGG: bch:Bcen2424_1908 protein of unknown function UPF0061 YP_001579552.1 activates fatty acids by binding to coenzyme A YP_001579553.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bch:Bcen2424_1906 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_001579554.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A5206 nicotinamidase YP_001579555.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001579556.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_A5204 diguanylate cyclase (GGDEF domain) YP_001579557.1 KEGG: bam:Bamb_1890 putative lipoprotein YP_001579558.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bur:Bcep18194_A5200 hypothetical protein YP_001579559.1 PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_1837 hypothetical protein YP_001579560.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bpd:BURPS668_2287 oxidoreductase, zinc-binding dehydrogenase family YP_001579561.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bam:Bamb_1835 alpha/beta hydrolase fold-3 domain protein YP_001579562.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5197 GCN5-related N-acetyltransferase YP_001579563.1 PFAM: protein of unknown function DUF833; KEGG: bur:Bcep18194_A5196 protein of unknown function DUF833 YP_001579564.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bch:Bcen2424_1895 glycine cleavage T protein (aminomethyl transferase) YP_001579565.1 PFAM: aminodeoxychorismate lyase; KEGG: bur:Bcep18194_A5194 aminodeoxychorismate lyase YP_001579566.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_001579567.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA YP_001579568.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bam:Bamb_1828 hydrolase, TatD family YP_001579569.1 PFAM: Ankyrin; KEGG: bam:Bamb_1827 ankyrin YP_001579570.1 KEGG: bvi:Bcep1808_1813 hypothetical protein YP_001579571.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bch:Bcen2424_1888 MscS mechanosensitive ion channel YP_001579572.1 KEGG: bur:Bcep18194_A5187 ATPase-like YP_001579573.1 PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_1886 glycosyl transferase, group 1 YP_001579574.1 KEGG: bch:Bcen2424_1885 hypothetical protein YP_001579575.1 KEGG: bur:Bcep18194_A5184 hypothetical protein YP_001579576.1 PFAM: PsiF repeat protein; KEGG: bvi:Bcep1808_1807 PsiF repeat protein YP_001579577.1 TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: bam:Bamb_1819 L-asparaginases, type II YP_001579578.1 PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: bvi:Bcep1808_1805 peptidoglycan-binding LysM YP_001579579.1 KEGG: bam:Bamb_1817 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001579580.1 KEGG: bam:Bamb_1816 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_001579581.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate YP_001579582.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_1877 transcriptional regulator, LysR family YP_001579583.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001579584.1 KEGG: bur:Bcep18194_A5175 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001579585.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001579586.1 KEGG: bam:Bamb_1810 primosomal replication protein N-like protein YP_001579587.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001579588.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001579589.1 unwinds double stranded DNA YP_001579590.1 PFAM: protein of unknown function DUF47; KEGG: bvi:Bcep1808_1795 protein of unknown function DUF47 YP_001579591.1 PFAM: phosphate transporter; KEGG: bvi:Bcep1808_1794 phosphate transporter YP_001579592.1 PFAM: NLP/P60 protein; KEGG: bam:Bamb_1804 NLP/P60 protein YP_001579593.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: bur:Bcep18194_A5166 PhoH-like protein YP_001579594.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A5165 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001579595.1 PFAM: polysaccharide deacetylase; KEGG: bch:Bcen2424_1863 polysaccharide deacetylase YP_001579596.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bvi:Bcep1808_1789 NAD-dependent epimerase/dehydratase YP_001579597.1 PFAM: formyl transferase domain protein; KEGG: bam:Bamb_1799 formyl transferase domain protein YP_001579598.1 PFAM: glycosyl transferase family 2; KEGG: bvi:Bcep1808_1787 glycosyl transferase, family 2 YP_001579599.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bvi:Bcep1808_1786 DegT/DnrJ/EryC1/StrS aminotransferase YP_001579600.1 PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A5159 hypothetical protein YP_001579601.1 PFAM: glycosyl transferase family 39; KEGG: bch:Bcen2424_1857 glycosyl transferase, family 39 YP_001579602.1 PFAM: protein of unknown function DUF498; KEGG: bam:Bamb_1794 protein of unknown function DUF498 YP_001579603.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_001579604.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001579605.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_001579606.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bch:Bcen2424_1852 molybdenum cofactor synthesis domain YP_001579607.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bam:Bamb_1789 molybdopterin converting factor, subunit 1 YP_001579608.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bur:Bcep18194_A5151 molybdopterin biosynthesis MoaE YP_001579609.1 PFAM: globin; KEGG: bur:Bcep18194_A5150 globin-like protein YP_001579610.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bam:Bamb_1786 transcriptional regulator, BadM/Rrf2 family YP_001579611.1 KEGG: bch:Bcen2424_1847 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001579612.1 PFAM: protein of unknown function DUF937; KEGG: bch:Bcen2424_1846 protein of unknown function DUF937 YP_001579613.1 KEGG: bch:Bcen2424_1845 hypothetical protein YP_001579614.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bam:Bamb_1782 transcriptional regulator, MerR family YP_001579615.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_1781 carboxymuconolactone decarboxylase YP_001579616.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A5143 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_001579617.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bur:Bcep18194_A5142 ATP-NAD/AcoX kinase YP_001579618.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_1767 short-chain dehydrogenase/reductase SDR YP_001579619.1 PFAM: dehydrogenase E1 component; KEGG: bvi:Bcep1808_1766 pyruvate dehydrogenase (acetyl-transferring) YP_001579620.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bch:Bcen2424_1838 transketolase, central region YP_001579621.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: bvi:Bcep1808_1764 alpha/beta hydrolase fold YP_001579622.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001579623.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bam:Bamb_1773 MATE efflux family protein YP_001579624.1 KEGG: bch:Bcen2424_1834 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like protein YP_001579625.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_001579626.1 PFAM: protein of unknown function DUF980; KEGG: bur:Bcep18194_A5133 protein of unknown function DUF980 YP_001579627.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5132 major facilitator superfamily (MFS_1) transporter YP_001579628.1 PFAM: regulatory protein MerR; KEGG: bch:Bcen2424_1830 transcriptional regulator, MerR family YP_001579629.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001579630.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bam:Bamb_1766 thioredoxin YP_001579631.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA YP_001579632.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_1764 conserved hypothetical protein 103 YP_001579633.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001579634.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bch:Bcen2424_1824 L-carnitine dehydratase/bile acid-inducible protein F YP_001579635.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001579636.1 KEGG: bvi:Bcep1808_1749 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001579637.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bch:Bcen2424_1821 peptidase M23B YP_001579638.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses YP_001579639.1 KEGG: bch:Bcen2424_1819 3'-5' exonuclease YP_001579640.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bvi:Bcep1808_1745 endonuclease/exonuclease/phosphatase YP_001579641.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] YP_001579642.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001579643.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001579644.1 PFAM: protein of unknown function UPF0005; KEGG: bam:Bamb_1754 protein of unknown function UPF0005 YP_001579645.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001579646.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bam:Bamb_1752 radical SAM enzyme, Cfr family YP_001579647.1 SMART: helix-turn-helix domain protein; KEGG: bur:Bcep18194_A5114 transcriptional regulator, XRE family YP_001579648.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001579649.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001579650.1 KEGG: bvi:Bcep1808_1737 hypothetical protein YP_001579651.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: bch:Bcen2424_1809 pyrrolo-quinoline quinone YP_001579652.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001579653.1 Stimulates the elongation of poly(A) tails YP_001579654.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bam:Bamb_1744 small GTP-binding protein YP_001579655.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bch:Bcen2424_1805 HflK protein YP_001579656.1 PFAM: band 7 protein; KEGG: bur:Bcep18194_A5105 membrane protein, HflC YP_001579657.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_001579658.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001579659.1 PFAM: phosphoribosyltransferase; KEGG: bch:Bcen2424_1800 phosphoribosyltransferase YP_001579660.1 PFAM: K potassium transporter; KEGG: bch:Bcen2424_1799 K+ potassium transporter YP_001579661.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bcn:Bcen_6281 RNA binding S1 YP_001579662.1 KEGG: bch:Bcen2424_1797 hypothetical protein YP_001579663.1 PFAM: protein of unknown function DUF465; KEGG: bch:Bcen2424_1796 protein of unknown function DUF465 YP_001579664.1 SMART: helicase c2; KEGG: bur:Bcep18194_A5096 helicase C2 YP_001579665.1 KEGG: bam:Bamb_1732 competence lipoprotein ComL YP_001579666.1 KEGG: bur:Bcep18194_A5094 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001579667.1 PFAM: protein of unknown function DUF152; KEGG: bam:Bamb_1730 protein of unknown function DUF152 YP_001579668.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bur:Bcep18194_A5092 poly(R)-hydroxyalkanoic acid synthase, class I YP_001579669.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001579670.1 catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis YP_001579671.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bvi:Bcep1808_1715 polyhydroxyalkonate synthesis repressor, PhaR YP_001579672.1 KEGG: bch:Bcen2424_1784 hypothetical protein YP_001579673.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001579674.1 PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A5081 sugar kinase, ribokinase family YP_001579675.1 KEGG: bur:Bcep18194_A5079 hypothetical protein YP_001579676.1 catalyzes the formation of L-homocysteine from cystathionine YP_001579677.1 KEGG: bvi:Bcep1808_1709 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001579678.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1717 transcriptional regulator, LysR family YP_001579679.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_1776 alcohol dehydrogenase, zinc-binding domain protein YP_001579680.1 KEGG: bur:Bcep18194_A5074 hypothetical protein YP_001579681.1 KEGG: bam:Bamb_1714 hypothetical protein YP_001579682.1 PFAM: conserved hypothetical protein; KEGG: bch:Bcen2424_1774 conserved hypothetical protein 245 YP_001579683.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1773 ABC transporter related YP_001579684.1 PFAM: AsmA family protein; KEGG: bch:Bcen2424_1772 AsmA family protein YP_001579685.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1702 ABC transporter related YP_001579686.1 KEGG: bur:Bcep18194_A5057 hypothetical protein YP_001579687.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_1701 alcohol dehydrogenase, zinc-binding domain protein YP_001579688.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bvi:Bcep1808_1700 putative transcriptional regulator, AsnC family YP_001579689.1 KEGG: bch:Bcen2424_1759 hypothetical protein YP_001579690.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_1758 aldehyde dehydrogenase YP_001579691.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A5053 2-nitropropane dioxygenase, NPD YP_001579692.1 PFAM: OmpW family protein; KEGG: bam:Bamb_1680 OmpW family protein YP_001579693.1 PFAM: protein of unknown function DUF1289; KEGG: bam:Bamb_1676 protein of unknown function DUF1289 YP_001579694.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_1675 extracellular solute-binding protein, family 1 YP_001579695.1 KEGG: bch:Bcen2424_1750 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001579696.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1673 binding-protein-dependent transport systems inner membrane component YP_001579697.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5047 ABC spermidine/putrescine transporter, inner membrane subunit YP_001579698.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A5045 protein of unknown function DUF81 YP_001579699.1 PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_1670 protein of unknown function DUF442 YP_001579700.1 PFAM: beta-lactamase domain protein; KEGG: bam:Bamb_1669 beta-lactamase domain protein YP_001579701.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: bur:Bcep18194_A5042 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001579702.1 PFAM: regulatory protein MerR; Albicidin resistance; Transcription regulator MerR DNA binding; KEGG: bvi:Bcep1808_1686 putative transcriptional regulator, MerR family YP_001579703.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5037 RND efflux system, outer membrane lipoprotein, NodT family YP_001579704.1 PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_1740 acriflavin resistance protein YP_001579705.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_1739 efflux transporter, RND family, MFP subunit YP_001579706.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_1682 transcriptional regulator, TetR family YP_001579707.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bam:Bamb_1658 Cl-channel, voltage-gated family protein YP_001579708.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5032 hypothetical protein YP_001579709.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5031 transcriptional regulator, LysR family YP_001579710.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bam:Bamb_1655 xylose isomerase domain protein TIM barrel YP_001579711.1 PFAM: PfkB domain protein; KEGG: bvi:Bcep1808_1677 PfkB domain protein YP_001579712.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1653 major facilitator superfamily MFS_1 YP_001579713.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bch:Bcen2424_1731 gluconate 2-dehydrogenase YP_001579714.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_1729 transcriptional regulator, LacI family YP_001579715.1 KEGG: bur:Bcep18194_A5025 membrane protein YP_001579716.1 KEGG: bch:Bcen2424_1727 hypothetical protein YP_001579717.1 KEGG: bam:Bamb_1648 hypothetical protein YP_001579718.1 KEGG: bam:Bamb_1647 hypothetical protein YP_001579719.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_1724 transcriptional regulator, AsnC family YP_001579721.1 PFAM: TrkA-N domain protein; Saccharopine dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bur:Bcep18194_A5016 saccharopine dehydrogenase YP_001579722.1 KEGG: bam:Bamb_1644 hypothetical protein YP_001579723.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bcn:Bcen_6357 Cyd operon protein YbgT YP_001579724.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bch:Bcen2424_1721 magnesium and cobalt transport protein CorA YP_001579725.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001579726.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bch:Bcen2424_1719 YbaK/prolyl-tRNA synthetase associated region YP_001579727.1 KEGG: bam:Bamb_1613 endoribonuclease L-PSP YP_001579728.1 PFAM: OsmC family protein; KEGG: bam:Bamb_1612 OsmC family protein YP_001579729.1 KEGG: bur:Bcep18194_A4881 hypothetical protein YP_001579730.1 KEGG: bam:Bamb_1611 hypothetical protein YP_001579731.1 KEGG: bur:Bcep18194_A4879 hypothetical protein YP_001579732.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_1608 transcriptional regulator, MarR family YP_001579733.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bvi:Bcep1808_1623 glutathione-dependent formaldehyde-activating, GFA YP_001579734.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A4869 2-nitropropane dioxygenase, NPD YP_001579735.1 KEGG: bur:Bcep18194_A4867 transcriptional regulator, LysR family YP_001579736.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_1604 major facilitator superfamily MFS_1 YP_001579737.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_1695 transcriptional regulator, LysR family YP_001579738.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_1601 glyoxalase/bleomycin resistance protein/dioxygenase YP_001579739.1 PFAM: pyruvate carboxyltransferase; KEGG: bch:Bcen2424_1692 pyruvate carboxyltransferase YP_001579740.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bch:Bcen2424_1691 L-carnitine dehydratase/bile acid-inducible protein F YP_001579741.1 KEGG: bch:Bcen2424_1689 hypothetical protein YP_001579742.1 KEGG: bvi:Bcep1808_4892 hypothetical protein YP_001579743.1 KEGG: bam:Bamb_1594 hypothetical protein YP_001579744.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1593 binding-protein-dependent transport systems inner membrane component YP_001579745.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1592 binding-protein-dependent transport systems inner membrane component YP_001579746.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_1591 ABC transporter related YP_001579747.1 KEGG: bch:Bcen2424_1684 extracellular solute-binding protein, family 1 YP_001579748.1 PFAM: Glutathione S-transferase domain; KEGG: bvi:Bcep1808_1618 glutathione S-transferase, N-terminal domain YP_001579749.1 KEGG: bam:Bamb_1578 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001579750.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 YP_001579751.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A YP_001579752.1 KEGG: bur:Bcep18194_A4826 precorrin-6y C5,15-methyltransferase, CbiE/CbiT; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001579753.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bur:Bcep18194_A4824 nitrite/sulfite reductase, hemoprotein beta subunit YP_001579754.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate YP_001579755.1 catalyzes the formation of precorrin-3 from precorrin-2 YP_001579756.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bch:Bcen2424_1671 precorrin-3B C17-methyltransferase YP_001579757.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bch:Bcen2424_1669 transcriptional regulator, IclR family YP_001579758.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bch:Bcen2424_1668 acyl-CoA dehydrogenase domain protein YP_001579759.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bam:Bamb_1566 citrate/H+ symporter, CitMHS family YP_001579760.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bch:Bcen2424_1666 L-carnitine dehydratase/bile acid-inducible protein F YP_001579761.1 KEGG: bch:Bcen2424_1665 hypothetical protein YP_001579762.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_1563 NUDIX hydrolase YP_001579764.1 KEGG: bch:Bcen2424_1662 hypothetical protein YP_001579765.1 KEGG: bam:Bamb_1559 Mg-chelatase subunit ChlD-like protein YP_001579766.1 KEGG: bam:Bamb_1558 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001579767.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_001579768.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bam:Bamb_1556 cobalamin biosynthesis protein CobW YP_001579769.1 TIGRFAM: high-affinity nickel-transporter; KEGG: bvi:Bcep1808_1600 high-affinity nickel-transporter YP_001579770.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 YP_001579771.1 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3 YP_001579772.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_001579773.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_001579774.1 KEGG: bch:Bcen2424_1649 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001579775.1 KEGG: bch:Bcen2424_1648 hypothetical protein YP_001579776.1 KEGG: bur:Bcep18194_A4795 hypothetical protein YP_001579777.1 KEGG: bvi:Bcep1808_1590 hypothetical protein YP_001579778.1 KEGG: bch:Bcen2424_1645 folate-dependent phosphoribosylglycinamide formyltransferase PurN-like protein YP_001579779.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4790 TonB-dependent siderophore receptor YP_001579780.1 KEGG: bch:Bcen2424_1643 lysine/ornithine N-monooxygenase YP_001579781.1 KEGG: bam:Bamb_1539 hypothetical protein YP_001579782.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bch:Bcen2424_1641 amino acid adenylation domain YP_001579783.1 TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bch:Bcen2424_1640 amino acid adenylation domain YP_001579784.1 KEGG: bur:Bcep18194_A4785 ABC cyclic peptide/siderophore export pump, fused ATPase and inner membrane subunits; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_001579785.1 PFAM: periplasmic binding protein; KEGG: bch:Bcen2424_1638 periplasmic binding protein YP_001579786.1 PFAM: ferric iron reductase; KEGG: bam:Bamb_1534 ferric iron reductase YP_001579787.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_001579788.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4781 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit YP_001579789.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bch:Bcen2424_1634 taurine catabolism dioxygenase TauD/TfdA YP_001579790.1 PFAM: MbtH domain protein; KEGG: bam:Bamb_1530 MbtH domain protein YP_001579791.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease YP_001579792.1 KEGG: bch:Bcen2424_1631 hypothetical protein YP_001579793.1 KEGG: bch:Bcen2424_1630 hypothetical protein YP_001579794.1 KEGG: bpl:BURPS1106A_1912 hypothetical protein YP_001579795.1 PFAM: pili assembly chaperone; KEGG: bch:Bcen2424_1628 pili assembly chaperone YP_001579796.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_1524 fimbrial biogenesis outer membrane usher protein YP_001579797.1 PFAM: Fimbrial protein; KEGG: bam:Bamb_1523 fimbrial protein YP_001579799.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_1522 RND efflux system, outer membrane lipoprotein, NodT family YP_001579800.1 MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery YP_001579801.1 MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery YP_001579802.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bch:Bcen2424_1621 transcriptional regulator, TetR family YP_001579803.1 PFAM: peptidase M23B; KEGG: bur:Bcep18194_A4765 peptidase M23B YP_001579804.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_1619 polar amino acid ABC transporter, inner membrane subunit YP_001579805.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_1618 polar amino acid ABC transporter, inner membrane subunit YP_001579806.1 PFAM: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_1617 extracellular solute-binding protein, family 3 YP_001579807.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4754 citrate-proton symporter, (MFS_1) YP_001579808.1 PFAM: SpoVR family protein; KEGG: bur:Bcep18194_A4753 SpoVR family protein YP_001579809.1 PFAM: protein of unknown function DUF444; KEGG: bur:Bcep18194_A4752 hypothetical protein YP_001579810.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bvi:Bcep1808_1564 putative serine protein kinase, PrkA YP_001579811.1 PFAM: chemotaxis sensory transducer; KEGG: bch:Bcen2424_1611 methyl-accepting chemotaxis sensory transducer YP_001579812.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: bch:Bcen2424_1610 ribokinase YP_001579813.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_1609 transcriptional regulator, LacI family YP_001579814.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_1608 inner-membrane translocator YP_001579815.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4746 ABC sugar transporter, ATPase subunit YP_001579816.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_1606 periplasmic binding protein/LacI transcriptional regulator YP_001579817.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4743 transcriptional regulator, LysR family YP_001579818.1 KEGG: bur:Bcep18194_A4742 ABC sulfate transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001579819.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4741 sulfate ABC transporter, inner membrane subunit CysW YP_001579820.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1498 sulfate ABC transporter, inner membrane subunit CysT YP_001579821.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_1601 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001579822.1 Represses a number of genes involved in the response to DNA damage YP_001579823.1 KEGG: bch:Bcen2424_1599 hypothetical protein YP_001579824.1 KEGG: bur:Bcep18194_A4736 hypothetical protein YP_001579825.1 PFAM: UspA domain protein; KEGG: bam:Bamb_1493 UspA domain protein YP_001579826.1 involved in the export of lipooligosaccharides during nodulation YP_001579827.1 TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_A4733 ABC efflux pump, inner membrane subunit, NodJ YP_001579828.1 KEGG: bam:Bamb_1490 hypothetical protein YP_001579829.1 PFAM: permease; KEGG: bch:Bcen2424_1593 permease YP_001579830.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA YP_001579831.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4729 transcriptional regulator, LysR family YP_001579832.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bch:Bcen2424_1590 peptidase M20 YP_001579833.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_1589 major facilitator superfamily MFS_1 YP_001579834.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_1484 aldo/keto reductase YP_001579835.1 PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_1483 hypothetical protein YP_001579836.1 PFAM: helix-turn-helix HxlR type; KEGG: bam:Bamb_1482 transcriptional regulator, HxlR family YP_001579838.1 KEGG: bcn:Bcen_1105 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases like enzyme YP_001579840.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_1478 glyoxalase/bleomycin resistance protein/dioxygenase YP_001579841.1 KEGG: bch:Bcen2424_1581 hypothetical protein YP_001579842.1 KEGG: bur:Bcep18194_A4718 hypothetical protein YP_001579843.1 PFAM: protein of unknown function DUF1260; KEGG: bur:Bcep18194_A4716 hypothetical protein YP_001579845.1 KEGG: bam:Bamb_1473 hypothetical protein YP_001579846.1 PFAM: Integrase catalytic region; KEGG: bps:BPSL0943 putative insertion element protein YP_001579847.1 PFAM: LmbE family protein; KEGG: cdf:CD2790 hypothetical protein YP_001579848.1 KEGG: cko:CKO_01871 hypothetical protein YP_001579849.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: bch:Bcen2424_1568 TIM-barrel protein, YjbN family YP_001579850.1 KEGG: bur:Bcep18194_A4709 hypothetical protein YP_001579851.1 KEGG: bvi:Bcep1808_1530 hypothetical protein YP_001579852.1 PFAM: TOBE domain protein; KEGG: bvi:Bcep1808_1529 TOBE domain protein YP_001579853.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1465 ABC transporter related YP_001579854.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4705 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001579855.1 catalyzes the release of sulfite from alkanesulfonates YP_001579856.1 KEGG: bam:Bamb_1462 hypothetical protein YP_001579857.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA YP_001579858.1 PFAM: small multidrug resistance protein; KEGG: bvi:Bcep1808_1523 small multidrug resistance protein YP_001579859.1 PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_A4700 hypothetical protein YP_001579860.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_1458 NUDIX hydrolase YP_001579861.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_001579862.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001579863.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001579864.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bam:Bamb_1454 extracellular solute-binding protein, family 3 YP_001579865.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1453 polar amino acid ABC transporter, inner membrane subunit YP_001579866.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bam:Bamb_1452 oxidoreductase domain protein YP_001579867.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_1550 GntR domain protein YP_001579868.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_001579869.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bch:Bcen2424_1548 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001579870.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bur:Bcep18194_A4689 RNA methyltransferase TrmH, group 3 YP_001579871.1 KEGG: bch:Bcen2424_1546 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_001579872.1 PFAM: protein of unknown function DUF849; KEGG: pat:Patl_2322 protein of unknown function DUF849 YP_001579873.1 KEGG: pde:Pden_4530 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001579874.1 PFAM: short chain fatty acid transporter; KEGG: oih:OB2549 short-chain fatty acids transporter YP_001579875.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pde:Pden_4528 helix-turn-helix-domain containing protein, AraC type YP_001579876.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RSc1889 probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein YP_001579877.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc1890 probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein YP_001579878.1 PFAM: amidohydrolase 2; KEGG: ypi:YpsIP31758_2151 amidohydrolase family protein YP_001579879.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yps:YPTB1930 putative MFS aromatic acid symporter YP_001579880.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0814 transcriptional regulator, LysR family YP_001579881.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bte:BTH_II0813 dehydrogenase, FMN-dependent family YP_001579882.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: gox:GOX0739 transcriptional regulator, Mer family YP_001579883.1 KEGG: bch:Bcen2424_6046 hypothetical protein YP_001579884.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pfl:PFL_3457 transcriptional regulator, MerR family YP_001579885.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_6048 alpha/beta hydrolase fold YP_001579886.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: gox:GOX0741 hypothetical protein YP_001579887.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: bxe:Bxe_A1459 bacterioferritin YP_001579888.1 PFAM: AsmA family protein; KEGG: bxe:Bxe_A2321 putative transmembrane protein, AsmA-like YP_001579889.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1233 putative membrane transport protein YP_001579890.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bam:Bamb_4465 sulfate transporter YP_001579891.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: bam:Bamb_4466 CHAD domain containing protein YP_001579892.1 KEGG: bxe:Bxe_B0669 hypothetical protein YP_001579893.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_1545 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_001579894.1 PFAM: NADPH-dependent FMN reductase; KEGG: mag:amb4017 multimeric flavodoxin WrbA YP_001579895.1 PFAM: ROK family protein; KEGG: bur:Bcep18194_A4684 ROK family protein YP_001579896.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1543 ABC transporter related YP_001579897.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_1542 inner-membrane translocator YP_001579898.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4681 ABC sugar transporter, periplasmic ligand binding protein YP_001579899.1 PFAM: PfkB domain protein; KEGG: bch:Bcen2424_1540 PfkB domain protein YP_001579900.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A4679 sulfate transporter/antisigma-factor antagonist STAS YP_001579901.1 PFAM: Putative ParB-like nuclease; KEGG: bvi:Bcep1808_1504 hypothetical protein YP_001579902.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_1537 GCN5-related N-acetyltransferase YP_001579903.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4676 major facilitator superfamily (MFS_1) transporter YP_001579904.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_A4675 transcriptional regulator, TetR family YP_001579905.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A4674 AMP-dependent synthetase and ligase YP_001579906.1 KEGG: bch:Bcen2424_1532 hypothetical protein YP_001579907.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bvi:Bcep1808_1497 RNA chaperone Hfq YP_001579908.1 KEGG: bam:Bamb_1412 hypothetical protein YP_001579909.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1495 sigma54 specific transcriptional regulator, fis family YP_001579910.1 KEGG: bpm:BURPS1710b_1950 hypothetical protein YP_001579911.1 KEGG: bvi:Bcep1808_1493 hypothetical protein YP_001579912.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bvi:Bcep1808_1492 tetratricopeptide TPR_2 repeat protein YP_001579913.1 PFAM: type II secretion system protein; KEGG: bvi:Bcep1808_1491 type II secretion system protein YP_001579914.1 PFAM: type II secretion system protein; KEGG: bvi:Bcep1808_1490 type II secretion system protein YP_001579915.1 PFAM: type II secretion system protein E; KEGG: bvi:Bcep1808_1489 type II secretion system protein E YP_001579916.1 KEGG: bvi:Bcep1808_1488 response regulator receiver protein YP_001579917.1 PFAM: type II and III secretion system protein; KEGG: bvi:Bcep1808_1487 type II and III secretion system protein YP_001579918.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bvi:Bcep1808_1486 SAF domain YP_001579919.1 PFAM: TadE family protein; KEGG: bte:BTH_I2544 hypothetical protein YP_001579920.1 PFAM: peptidase A24A prepilin type IV; KEGG: bam:Bamb_1400 peptidase A24A, prepilin type IV YP_001579921.1 PFAM: Flp/Fap pilin component; KEGG: bvi:Bcep1808_1483 Flp/Fap pilin component YP_001579922.1 KEGG: bvi:Bcep1808_1482 hypothetical protein YP_001579923.1 KEGG: bur:Bcep18194_A4656 hypothetical protein YP_001579924.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: bur:Bcep18194_A4655 hemolysin activation/secretion protein YP_001579925.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001579926.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001579927.1 KEGG: bch:Bcen2424_1513 hypothetical protein YP_001579928.1 KEGG: bch:Bcen2424_1512 hypothetical protein YP_001579929.1 PFAM: AFG1-family ATPase; KEGG: bch:Bcen2424_1511 AFG1-family ATPase YP_001579930.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001579931.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA YP_001579932.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001579933.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bvi:Bcep1808_1473 GTP-binding protein TypA YP_001579934.1 PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4647 transcriptional regulator, MarR family YP_001579935.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_1505 RND efflux system, outer membrane lipoprotein, NodT family YP_001579936.1 TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_1386 secretion protein HlyD family protein YP_001579937.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1385 drug resistance transporter, EmrB/QacA subfamily YP_001579938.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_001579939.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001579940.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001579941.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_001579942.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_001579943.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bvi:Bcep1808_1463 pseudouridine synthase YP_001579944.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bam:Bamb_1378 putative transcriptional regulator YP_001579945.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_001579946.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1376 transcriptional regulator, LysR family YP_001579947.1 KEGG: bam:Bamb_1375 hypothetical protein YP_001579948.1 KEGG: bur:Bcep18194_A4633 hypothetical protein YP_001579949.1 KEGG: bch:Bcen2424_1491 hypothetical protein YP_001579950.1 PFAM: protein of unknown function DUF218; KEGG: bch:Bcen2424_1490 protein of unknown function DUF218 YP_001579951.1 KEGG: bur:Bcep18194_A4630 hypothetical protein YP_001579952.1 KEGG: bte:BTH_I2576 hypothetical protein YP_001579953.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bch:Bcen2424_1487 antibiotic biosynthesis monooxygenase YP_001579954.1 KEGG: bur:Bcep18194_A4627 hypothetical protein YP_001579955.1 KEGG: bch:Bcen2424_1486 uncharacterized lipoprotein-like protein YP_001579956.1 PFAM: protein of unknown function DUF811; KEGG: bch:Bcen2424_1483 protein of unknown function DUF811 YP_001579957.1 PFAM: regulatory protein MerR; KEGG: bch:Bcen2424_1482 transcriptional regulator, MerR family YP_001579958.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001579959.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001579960.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001579961.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001579962.1 PFAM: ribosomal protein L35; KEGG: bvi:Bcep1808_1441 ribosomal protein L35 YP_001579963.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bch:Bcen2424_1476 translation initiation factor IF-3 YP_001579964.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001579965.1 KEGG: bur:Bcep18194_A4614 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein YP_001579966.1 PFAM: Endoribonuclease L-PSP; KEGG: bch:Bcen2424_1472 endoribonuclease L-PSP YP_001579967.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_1356 alpha/beta hydrolase fold YP_001579968.1 KEGG: bvi:Bcep1808_1431 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001579969.1 KEGG: bvi:Bcep1808_1430 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001579970.1 KEGG: bch:Bcen2424_1464 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001579971.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A4608 thioesterase superfamily YP_001579972.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_1427 short-chain dehydrogenase/reductase SDR YP_001579973.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bch:Bcen2424_1461 electron-transferring-flavoprotein dehydrogenase YP_001579974.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001579975.1 PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_1420 phospholipid/glycerol acyltransferase YP_001579976.1 PFAM: CBS domain containing protein; KEGG: bch:Bcen2424_1458 putative transcriptional regulator, XRE family YP_001579977.1 KEGG: bch:Bcen2424_1457 membrane protein YP_001579978.1 PFAM: ribonuclease BN; KEGG: bur:Bcep18194_A4601 ribonuclease BN YP_001579979.1 PFAM: integrase family protein; KEGG: bvi:Bcep1808_1144 phage integrase family protein YP_001579980.1 KEGG: reu:Reut_A2419 hypothetical protein YP_001579981.1 KEGG: bur:Bcep18194_A5237 hypothetical protein YP_001579982.1 PFAM: glycoside hydrolase family 24; KEGG: bpm:BURPS1710b_1695 putative lysozyme YP_001579983.1 KEGG: bvi:Bcep1808_4562 hypothetical protein YP_001579984.1 PFAM: acyltransferase 3; KEGG: bxe:Bxe_A1535 putative O-antigen acetylase YP_001579986.1 KEGG: reu:Reut_A2412 hypothetical protein YP_001579987.1 KEGG: bvi:Bcep1808_4559 putative bacteriophage protein YP_001579988.1 KEGG: bvi:Bcep1808_4558 putative bacteriophage protein YP_001579989.1 KEGG: bvi:Bcep1808_4557 hypothetical protein YP_001579990.1 KEGG: bhe:BH03110 phage protein YP_001579991.1 KEGG: bvi:Bcep1808_4556 putative bacteriophage protein YP_001579993.1 KEGG: bvi:Bcep1808_4555 hypothetical protein YP_001579994.1 KEGG: bvi:Bcep1808_4549 hypothetical protein YP_001579995.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001579996.1 KEGG: bvi:Bcep1808_4549 hypothetical protein YP_001579997.1 KEGG: bvi:Bcep1808_4548 hypothetical protein YP_001579998.1 KEGG: bvi:Bcep1808_4547 putative bacteriophage protein YP_001579999.1 KEGG: bvi:Bcep1808_4546 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001580000.1 KEGG: bvi:Bcep1808_4545 putative bacteriophage protein YP_001580001.1 KEGG: bvi:Bcep1808_4544 putative bacteriophage protein YP_001580002.1 KEGG: bvi:Bcep1808_4542 hypothetical protein YP_001580003.1 KEGG: bvi:Bcep1808_4540 putative bacteriophage protein YP_001580004.1 KEGG: bvi:Bcep1808_4538 putative bacteriophage protein YP_001580005.1 KEGG: bvi:Bcep1808_4537 putative bacteriophage protein YP_001580006.1 KEGG: bvi:Bcep1808_4536 putative bacteriophage protein YP_001580007.1 KEGG: bvi:Bcep1808_4535 hypothetical protein YP_001580008.1 KEGG: reu:Reut_A2394 putative bacteriophage protein YP_001580009.1 KEGG: reu:Reut_A2393 putative bacteriophage protein YP_001580010.1 KEGG: reu:Reut_A2392 putative bacteriophage protein YP_001580011.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: reu:Reut_A2390 phage putative head morphogenesis protein, SPP1 gp7 YP_001580012.1 TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: reu:Reut_A2389 hypothetical protein YP_001580013.1 KEGG: sec:SC2610 hypothetical protein YP_001580014.1 PFAM: Terminase small subunit; KEGG: pap:PSPA7_2403 terminase small subunit YP_001580017.1 KEGG: bvi:Bcep1808_4526 hypothetical protein YP_001580018.1 PFAM: endodeoxyribonuclease RusA; KEGG: bvi:Bcep1808_4525 endodeoxyribonuclease RusA YP_001580019.1 KEGG: bpd:BURPS668_A2361 hypothetical protein YP_001580020.1 PFAM: protein of unknown function DUF1376; KEGG: xft:PD1000 hypothetical protein YP_001580021.1 KEGG: bvi:Bcep1808_4522 hypothetical protein YP_001580022.1 KEGG: bvi:Bcep1808_4521 hypothetical protein YP_001580023.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: bvi:Bcep1808_4541 pathogenesis-related transcriptional factor and ERF protein YP_001580024.1 KEGG: bvi:Bcep1808_4519 hypothetical protein YP_001580025.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: pap:PSPA7_0755 transcriptional regulator PrtR YP_001580028.1 KEGG: bvi:Bcep1808_1158 hypothetical protein YP_001580029.1 KEGG: bbr:BB2196 phage-related hypothetical protein YP_001580030.1 KEGG: lwe:lwe1201 hypothetical protein YP_001580031.1 KEGG: bvi:Bcep1808_4509 hypothetical protein YP_001580032.1 KEGG: bvi:Bcep1808_4508 hypothetical protein YP_001580033.1 KEGG: bpd:BURPS668_A2372 GP38 YP_001580034.1 KEGG: bvi:Bcep1808_1155 hypothetical protein YP_001580035.1 KEGG: bvi:Bcep1808_4506 exonuclease VIII, 5' -> 3' specific dsDNA exonuclease YP_001580036.1 PFAM: RecT protein; KEGG: bvi:Bcep1808_4505 RecT protein YP_001580037.1 PFAM: Recombination endonuclease VII; KEGG: sma:SAV6680 endonuclease VII YP_001580038.1 KEGG: bte:BTH_II1364 DNA methyltransferase YP_001580039.1 KEGG: bvi:Bcep1808_7494 hypothetical protein YP_001580040.1 KEGG: bvi:Bcep1808_1148 hypothetical protein YP_001580042.1 KEGG: bvi:Bcep1808_4497 hypothetical protein YP_001580044.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bch:Bcen2424_1455 flavodoxin/nitric oxide synthase YP_001580045.1 KEGG: bam:Bamb_1335 membrane protein-like protein YP_001580046.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A4598 FAD linked oxidase-like YP_001580047.1 PFAM: metallophosphoesterase; KEGG: bch:Bcen2424_1452 metallophosphoesterase YP_001580049.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4595 transcriptional regulator, LysR family YP_001580050.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bcn:Bcen_0967 RND efflux system, outer membrane lipoprotein, NodT YP_001580051.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bam:Bamb_1330 fusaric acid resistance protein conserved region YP_001580052.1 PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_A4592 protein of unknown function DUF1656 YP_001580053.1 PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_1446 secretion protein HlyD family protein YP_001580054.1 PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4589 methyl-accepting chemotaxis sensory transducer YP_001580055.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4588 major facilitator superfamily (MFS_1) transporter YP_001580056.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_001580057.1 PFAM: UvrD/REP helicase; KEGG: bam:Bamb_1322 UvrD/REP helicase YP_001580058.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_001580059.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bch:Bcen2424_1440 UTP-glucose-1-phosphate uridylyltransferase YP_001580060.1 KEGG: bch:Bcen2424_1439 hypothetical protein YP_001580061.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: bch:Bcen2424_1438 periplasmic sensor signal transduction histidine kinase YP_001580062.1 PFAM: Peptidoglycan-binding LysM; KEGG: bam:Bamb_1317 peptidoglycan-binding LysM YP_001580063.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_1436 two component transcriptional regulator, winged helix family YP_001580064.1 KEGG: bch:Bcen2424_1435 hypothetical protein YP_001580065.1 PFAM: SirA family protein; KEGG: bch:Bcen2424_1434 SirA family protein YP_001580066.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1395 transcriptional regulator, LysR family YP_001580067.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bvi:Bcep1808_1394 methylmalonate-semialdehyde dehydrogenase YP_001580068.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A4575 transcriptional regulator, RpiR family YP_001580069.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bch:Bcen2424_1430 oxidoreductase domain protein YP_001580070.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bch:Bcen2424_1429 xylose isomerase domain protein TIM barrel YP_001580071.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bvi:Bcep1808_1391 inositol 2-dehydrogenase YP_001580072.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase-like TIM barrel YP_001580073.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_1390 inner-membrane translocator YP_001580074.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1305 ABC transporter related YP_001580075.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_1424 periplasmic binding protein/LacI transcriptional regulator YP_001580076.1 PFAM: PfkB domain protein; KEGG: bvi:Bcep1808_1387 PfkB domain protein YP_001580077.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bch:Bcen2424_1422 thiamine pyrophosphate enzyme domain protein TPP-binding YP_001580078.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bch:Bcen2424_1421 xylose isomerase domain protein TIM barrel YP_001580079.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bch:Bcen2424_1420 myo-inositol catabolism IolB domain protein YP_001580080.1 PFAM: protein of unknown function DUF336; KEGG: bch:Bcen2424_1419 protein of unknown function DUF336 YP_001580081.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bch:Bcen2424_1418 short-chain dehydrogenase/reductase SDR YP_001580082.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1297 ABC transporter related YP_001580083.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1416 ABC transporter related YP_001580084.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4559 ABC branched chain amino acid family transporter, inner membrane subunit YP_001580085.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4558 ABC branched chain amino acid family transporter, inner membrane subunit YP_001580086.1 PFAM: thioesterase superfamily protein; KEGG: bch:Bcen2424_1413 thioesterase superfamily protein YP_001580087.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4556 NUDIX hydrolase YP_001580088.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bam:Bamb_1291 protein of unknown function DUF1228 YP_001580089.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4554 transcriptional regulator, LysR family YP_001580090.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001580091.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bam:Bamb_1285 L-carnitine dehydratase/bile acid-inducible protein F YP_001580092.1 PFAM: protein of unknown function DUF1234; KEGG: bam:Bamb_1284 protein of unknown function DUF1234 YP_001580093.1 KEGG: bur:Bcep18194_A4550 putative osmosis-related lipoprotein YP_001580094.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001580095.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_1281 NUDIX hydrolase YP_001580096.1 KEGG: bch:Bcen2424_1403 hypothetical protein YP_001580097.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bam:Bamb_1279 di-haem cytochrome c peroxidase YP_001580098.1 TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bam:Bamb_1278 phosphoesterase YP_001580099.1 KEGG: bch:Bcen2424_1392 protein of unknown function DUF1427 YP_001580100.1 PFAM: sodium/hydrogen exchanger; KEGG: bam:Bamb_1268 sodium/hydrogen exchanger YP_001580101.1 PFAM: OsmC family protein; KEGG: bam:Bamb_1267 OsmC family protein YP_001580102.1 PFAM: Pirin domain protein; KEGG: bam:Bamb_1266 pirin domain protein domain protein YP_001580103.1 KEGG: bvi:Bcep1808_1357 hypothetical protein YP_001580104.1 KEGG: bch:Bcen2424_1386 hypothetical protein YP_001580105.1 KEGG: bvi:Bcep1808_1355 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_001580106.1 KEGG: bch:Bcen2424_1384 ATPases involved in chromosome partitioning-like protein YP_001580107.1 KEGG: bcn:Bcen_0900 hypothetical protein YP_001580108.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: bam:Bamb_1260 cellulose synthase operon C domain protein YP_001580109.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans YP_001580110.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) YP_001580111.1 KEGG: bur:Bcep18194_A4512 hypothetical protein YP_001580112.1 PFAM: protein of unknown function DUF1446; KEGG: bur:Bcep18194_A4511 protein of unknown function DUF1446 YP_001580113.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; KEGG: bch:Bcen2424_1367 citrate/H+ symporter, CitMHS family YP_001580114.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4509 transcriptional regulator, LysR family YP_001580115.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bch:Bcen2424_1365 flavin reductase domain protein, FMN-binding YP_001580116.1 KEGG: bur:Bcep18194_A4505 hypothetical protein YP_001580117.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: bch:Bcen2424_1361 TonB-dependent siderophore receptor YP_001580118.1 PFAM: FecR protein; KEGG: bur:Bcep18194_A4503 putative FecR YP_001580119.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A4502 sigma-24 (FecI-like) YP_001580121.1 PFAM: porin Gram-negative type; KEGG: bch:Bcen2424_1357 porin, gram-negative type YP_001580122.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_1339 lytic transglycosylase, catalytic YP_001580123.1 KEGG: bvi:Bcep1808_1338 hypothetical protein YP_001580124.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_4592 two component transcriptional regulator, winged helix family YP_001580125.1 KEGG: bvi:Bcep1808_4591 hypothetical protein YP_001580126.1 KEGG: bvi:Bcep1808_4590 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001580127.1 SMART: regulatory protein Crp; KEGG: bvi:Bcep1808_4589 putative transcriptional regulator, Crp/Fnr family YP_001580128.1 acts as a molecular chaperone to fold and export lipase A YP_001580129.1 PFAM: alpha/beta hydrolase fold; Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: bte:BTH_II2339 lipase YP_001580130.1 KEGG: bpd:BURPS668_A3254 hypothetical protein YP_001580131.1 KEGG: bte:BTH_II2342 hypothetical protein YP_001580132.1 KEGG: bte:BTH_II2343 hypothetical protein YP_001580133.1 PFAM: protein of unknown function DUF214; KEGG: bpm:BURPS1710b_A1472 putative permease YP_001580134.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_II2345 ABC transporter, ATP-binding protein YP_001580135.1 PFAM: flavin-containing monooxygenase FMO; KEGG: bte:BTH_II2346 monooxygenase, flavin-binding family YP_001580136.1 PFAM: cytochrome P450; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_II2347 cytochrome P450-related protein YP_001580137.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; KEGG: bte:BTH_II2348 polyketide synthase, putative YP_001580138.1 PFAM: Acyl transferase; KEGG: bpl:BURPS1106A_A3148 putative acyl transferase YP_001580139.1 PFAM: outer membrane efflux protein; KEGG: bte:BTH_I2950 type I secretion outer membrane protein, TolC family YP_001580140.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bpd:BURPS668_3619 putative toxin secretion ABC transporter, ATP-binding protein YP_001580141.1 PFAM: secretion protein HlyD family protein; KEGG: bma:BMA2820 secretion protein, putative YP_001580142.1 KEGG: bte:BTH_II1143 hypothetical protein YP_001580144.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_1234 alcohol dehydrogenase, zinc-binding domain protein YP_001580145.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1232 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001580146.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_1338 (2Fe-2S)-binding domain protein YP_001580147.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2720 outer membrane porin, OmpC family YP_001580148.1 PFAM: class II aldolase/adducin family protein; KEGG: bch:Bcen2424_1340 class II aldolase/adducin family protein YP_001580149.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3029 major facilitator superfamily (MFS_1) transporter YP_001580150.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2292 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase YP_001580151.1 KEGG: reu:Reut_A0381 hypothetical protein YP_001580152.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_A0380 helix-turn-helix, AraC type YP_001580153.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001580154.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_4395 major facilitator superfamily MFS_1 YP_001580155.1 PFAM: regulatory protein MarR; KEGG: reh:H16_B1575 putative transcriptional repressor YP_001580156.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bch:Bcen2424_2087 ethyl tert-butyl ether degradation EthD YP_001580157.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1922 transcriptional regulator, LysR-family YP_001580158.1 PFAM: isochorismatase hydrolase; KEGG: oan:Oant_3983 isochorismatase hydrolase YP_001580159.1 KEGG: bvi:Bcep1808_3387 hypothetical protein YP_001580160.1 PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_6440 aldo/keto reductase YP_001580161.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6337 transcriptional regulator, LysR family YP_001580162.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_C6640 sigma-24 (FecI-like) YP_001580163.1 KEGG: bch:Bcen2424_2382 hypothetical protein YP_001580164.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_1493 transcriptional regulator, LysR family YP_001580165.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gox:GOX0911 putative oxidoreductase YP_001580166.1 KEGG: bch:Bcen2424_4928 hypothetical protein YP_001580167.1 KEGG: xfa:XF2773 hypothetical protein YP_001580168.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: bvi:Bcep1808_3997 polypeptide-transport-associated domain protein, ShlB-type YP_001580169.1 KEGG: bvi:Bcep1808_7134 hypothetical protein YP_001580170.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001580171.1 PFAM: Aldose 1-epimerase; KEGG: bam:Bamb_1203 aldose 1-epimerase YP_001580172.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bam:Bamb_1202 peptidase M23B YP_001580173.1 KEGG: bmn:BMA10247_0601 hypothetical protein YP_001580174.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bam:Bamb_1201 AMP-dependent synthetase and ligase YP_001580175.1 KEGG: bur:Bcep18194_A4458 uncharacterized small conserved protein YP_001580176.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bch:Bcen2424_1314 MATE efflux family protein YP_001580177.1 KEGG: bam:Bamb_1198 hypothetical protein YP_001580178.1 KEGG: bam:Bamb_1197 hypothetical protein YP_001580179.1 KEGG: bam:Bamb_1196 putative hemolysin-like protein YP_001580180.1 PFAM: Phosphoglycerate mutase; KEGG: bch:Bcen2424_1310 phosphohistidine phosphatase, SixA YP_001580182.1 KEGG: nmu:Nmul_A0655 hypothetical protein YP_001580183.1 PFAM: CsbD family protein; KEGG: bxe:Bxe_A2598 hypothetical protein YP_001580184.1 PFAM: Entericidin EcnAB; KEGG: bxe:Bxe_A1455 hypothetical protein YP_001580185.1 PFAM: Catalase domain protein; KEGG: xcv:XCV1240 catalase YP_001580186.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mpt:Mpe_A0996 hypothetical protein YP_001580187.1 KEGG: mpt:Mpe_A3629 hypothetical protein YP_001580188.1 KEGG: bur:Bcep18194_B2684 hypothetical protein YP_001580190.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2270 putative major facilitator superfamily (MFS)oxalate/formate antiporter YP_001580192.1 KEGG: bte:BTH_II0363 hypothetical protein YP_001580193.1 KEGG: bur:Bcep18194_A4452 hypothetical protein YP_001580194.1 PFAM: Ppx/GppA phosphatase; KEGG: bch:Bcen2424_1308 Ppx/GppA phosphatase YP_001580195.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001580196.1 KEGG: bam:Bamb_1183 histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein YP_001580197.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I2768 phosphate regulon transcriptional regulatory protein PhoB YP_001580198.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bam:Bamb_1181 phosphate uptake regulator, PhoU YP_001580199.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_001580200.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions YP_001580201.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions YP_001580202.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_1300 phosphate ABC transporter, periplasmic phosphate-binding protein YP_001580203.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001580204.1 KEGG: bam:Bamb_1175 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_001580205.1 KEGG: bvi:Bcep1808_1250 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001580206.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bch:Bcen2424_1296 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001580207.1 PFAM: protein of unknown function UPF0044; KEGG: bur:Bcep18194_A4437 hypothetical protein YP_001580208.1 KEGG: bvi:Bcep1808_1247 hypothetical protein YP_001580209.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001580210.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_001580211.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_1291 lysine exporter protein (LysE/YggA) YP_001580212.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_001580213.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4431 major facilitator superfamily (MFS_1) transporter YP_001580214.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: bam:Bamb_1165 lytic transglycosylase, catalytic YP_001580215.1 KEGG: bvi:Bcep1808_1240 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_001580216.1 PFAM: Methyltransferase type 11; KEGG: bvi:Bcep1808_1239 methyltransferase type 11 YP_001580217.1 PFAM: ribonuclease H; KEGG: bvi:Bcep1808_1238 ribonuclease H YP_001580218.1 3'-5' exonuclease of DNA polymerase III YP_001580219.1 PFAM: protein of unknown function UPF0060; KEGG: bch:Bcen2424_1283 protein of unknown function UPF0060 YP_001580220.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_1281 general substrate transporter YP_001580221.1 KEGG: bvi:Bcep1808_1234 hypothetical protein YP_001580222.1 KEGG: bvi:Bcep1808_1233 glutathione S-transferase, N-terminal domain YP_001580223.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bam:Bamb_1156 polyhydroxyalkanoate depolymerase, intracellular YP_001580224.1 PFAM: phosphoribosyltransferase; KEGG: bur:Bcep18194_A4420 phosphoribosyltransferase YP_001580225.1 KEGG: bam:Bamb_1154 hypothetical protein YP_001580226.1 KEGG: bur:Bcep18194_A4418 acyl-carrier-protein S-malonyltransferase YP_001580227.1 KEGG: bam:Bamb_1152 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_001580228.1 catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein YP_001580229.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bur:Bcep18194_A4415 malonate decarboxylase gamma subunit YP_001580230.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_001580231.1 acyl carrier protein of malonate decarboxylase YP_001580232.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bvi:Bcep1808_1223 hypothetical protein YP_001580233.1 TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bur:Bcep18194_A4411 malonate/sodium symporter MadM subunit YP_001580234.1 TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: bch:Bcen2424_1267 malonate transporter MadL subunit YP_001580235.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1220 transcriptional regulator, LysR family YP_001580236.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bch:Bcen2424_1264 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_001580237.1 PFAM: heat shock protein Hsp20; KEGG: bvi:Bcep1808_1219 heat shock protein HSP20 YP_001580238.1 PFAM: heat shock protein Hsp20; KEGG: bvi:Bcep1808_1218 heat shock protein HSP20 YP_001580239.1 KEGG: bur:Bcep18194_A4404 hypothetical protein YP_001580240.1 PFAM: Integral membrane protein TerC; KEGG: bam:Bamb_1139 integral membrane protein TerC YP_001580241.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1138 transcriptional regulator, LysR family YP_001580242.1 KEGG: bur:Bcep18194_A4401 hypothetical protein YP_001580243.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_1255 major facilitator superfamily MFS_1 YP_001580244.1 PFAM: histone deacetylase superfamily; KEGG: bch:Bcen2424_1254 histone deacetylase superfamily YP_001580245.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001580246.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_1131 major facilitator superfamily MFS_1 YP_001580247.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_1251 transcriptional regulator, LysR family YP_001580248.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bch:Bcen2424_1249 permease for cytosine/purines, uracil, thiamine, allantoin YP_001580249.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bam:Bamb_1127 nucleoside-diphosphate-sugar epimerase-like protein YP_001580250.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A4375 transcriptional regulator, AraC family YP_001580251.1 KEGG: bur:Bcep18194_A4374 lysophospholipase-like YP_001580252.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: bam:Bamb_3782 polypeptide-transport-associated domain protein, ShlB-type YP_001580253.1 KEGG: bvi:Bcep1808_3996 hypothetical protein YP_001580254.1 KEGG: bch:Bcen2424_1236 hypothetical protein YP_001580255.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4344 transcriptional regulator, LacI family YP_001580256.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4343 ABC transporter, periplasmic ligand binding protein YP_001580257.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4342 ABC transporter, inner membrane subunit YP_001580258.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4341 ABC spermidine/putrescine transporter, inner membrane subunit YP_001580259.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_1114 ABC transporter related YP_001580260.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_1113 metallophosphoesterase YP_001580261.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4338 major facilitator superfamily (MFS_1) transporter YP_001580262.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_1228 protein of unknown function DUF6, transmembrane YP_001580263.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001580265.1 KEGG: bch:Bcen2424_1221 hypothetical protein YP_001580266.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bvi:Bcep1808_1129 protein of unknown function DUF6, transmembrane YP_001580267.1 PFAM: EAL domain protein; KEGG: bam:Bamb_1101 diguanylate phosphodiesterase YP_001580268.1 PFAM: Class I peptide chain release factor; KEGG: bvi:Bcep1808_1127 class I peptide chain release factor YP_001580269.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: bch:Bcen2424_1216 exodeoxyribonuclease V, alpha subunit YP_001580270.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: bch:Bcen2424_1215 exodeoxyribonuclease V, beta subunit YP_001580271.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: bch:Bcen2424_1214 exodeoxyribonuclease V, gamma subunit YP_001580272.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bur:Bcep18194_A4321 protein of unknown function DUF893, YccS/YhfK YP_001580273.1 PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_1212 amino acid permease-associated region YP_001580274.1 KEGG: bur:Bcep18194_A4319 hypothetical protein YP_001580275.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_1093 extracellular solute-binding protein, family 1 YP_001580276.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit YP_001580277.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4316 ABC spermidine/putrescine transporter, ATPase subunit YP_001580278.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_1207 transcriptional regulator, AsnC family YP_001580279.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A4314 NAD-dependent epimerase/dehydratase YP_001580280.1 PFAM: protein of unknown function UPF0074; KEGG: bch:Bcen2424_1205 transcriptional regulator, BadM/Rrf2 family YP_001580281.1 KEGG: bvi:Bcep1808_1118 hypothetical protein YP_001580282.1 KEGG: bam:Bamb_1086 hypothetical protein YP_001580283.1 PFAM: Rh family protein/ammonium transporter; KEGG: bch:Bcen2424_1202 Rh family protein/ammonium transporter YP_001580284.1 KEGG: bch:Bcen2424_1201 phosphatase-like protein YP_001580285.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_1081 transcriptional regulator, IclR family YP_001580286.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bur:Bcep18194_A4306 secretion protein HlyD family YP_001580287.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4305 acriflavin resistance protein YP_001580288.1 PFAM: acriflavin resistance protein; KEGG: bam:Bamb_1078 acriflavin resistance protein YP_001580289.1 PFAM: regulatory protein IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family YP_001580290.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_1077 transcriptional regulator, AraC family YP_001580291.1 KEGG: bam:Bamb_1076 outer membrane protein (porin) YP_001580292.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_1075 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001580293.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_1074 (2Fe-2S)-binding domain protein YP_001580294.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_1194 glyoxalase/bleomycin resistance protein/dioxygenase YP_001580295.1 PFAM: protein of unknown function DUF88; KEGG: bam:Bamb_1072 protein of unknown function DUF88 YP_001580296.1 PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; KEGG: bam:Bamb_1071 NAD-dependent epimerase/dehydratase YP_001580297.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bvi:Bcep1808_1108 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001580298.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bur:Bcep18194_A4299 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_001580299.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: bur:Bcep18194_A4298 putative signal transduction protein YP_001580300.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_A4297 ABC transporter, periplasmic ligand binding protein YP_001580301.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism YP_001580302.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation YP_001580303.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH YP_001580304.1 KEGG: bam:Bamb_1063 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_001580305.1 KEGG: bur:Bcep18194_A4292 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit YP_001580306.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate YP_001580307.1 KEGG: rso:RSc2281 probable transmembrane protein YP_001580308.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_1178 transcriptional regulator, AraC family YP_001580309.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1177 ABC transporter related YP_001580310.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1055 polar amino acid ABC transporter, inner membrane subunit YP_001580311.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1054 polar amino acid ABC transporter, inner membrane subunit YP_001580312.1 KEGG: bur:Bcep18194_A4286 hypothetical protein YP_001580313.1 KEGG: bur:Bcep18194_A4285 hypothetical protein YP_001580314.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: bch:Bcen2424_1172 YdjC family protein YP_001580315.1 KEGG: bvi:Bcep1808_1090 radical SAM domain protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001580316.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_1049 glycosyl transferase, family 2 YP_001580318.1 PFAM: luciferase family protein; KEGG: bch:Bcen2424_1169 luciferase family protein YP_001580319.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_1047 alpha/beta hydrolase fold YP_001580320.1 TIGRFAM: pyridoxal kinase; KEGG: bam:Bamb_1046 pyridoxal kinase YP_001580321.1 KEGG: bcn:Bcen_0687 twin-arginine translocation pathway signal; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001580322.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A4277 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001580323.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_1082 GntR domain protein YP_001580324.1 TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bch:Bcen2424_1163 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein YP_001580325.1 KEGG: bur:Bcep18194_A4274 membrane protein-like YP_001580326.1 KEGG: bam:Bamb_1039 hypothetical protein YP_001580327.1 PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_1160 glycosyl transferase, group 1 YP_001580328.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_1159 ABC transporter related YP_001580329.1 KEGG: bam:Bamb_1036 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001580330.1 KEGG: bam:Bamb_1035 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_001580331.1 PFAM: electron transport protein SCO1/SenC; KEGG: bur:Bcep18194_A4268 electron transport protein SCO1/SenC YP_001580332.1 PFAM: protein of unknown function DUF461; KEGG: bur:Bcep18194_A4267 protein of unknown function DUF461 YP_001580333.1 KEGG: bam:Bamb_1032 membrane protein YP_001580334.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_1153 GCN5-related N-acetyltransferase YP_001580335.1 PFAM: Pirin domain protein; KEGG: bch:Bcen2424_1152 pirin domain protein domain protein YP_001580336.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4263 transcriptional regulator, LysR family YP_001580337.1 SMART: GAF domain protein; KEGG: bch:Bcen2424_1150 putative GAF sensor protein YP_001580338.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bvi:Bcep1808_1067 methionine aminopeptidase, type I YP_001580339.1 KEGG: bvi:Bcep1808_1066 hypothetical protein YP_001580340.1 PFAM: helix-turn-helix domain protein; KEGG: bch:Bcen2424_1147 transcriptional regulator, XRE family YP_001580341.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_1024 GCN5-related N-acetyltransferase YP_001580342.1 KEGG: bam:Bamb_1020 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_001580343.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001580344.1 KEGG: bur:Bcep18194_A4254 hypothetical protein YP_001580345.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001580346.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bch:Bcen2424_1140 two component, sigma54 specific, transcriptional regulator, fis family YP_001580347.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides YP_001580348.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001580349.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001580350.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_001580351.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_001580352.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_001580353.1 KEGG: bch:Bcen2424_1133 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001580354.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001580355.1 PFAM: glutaredoxin 2; KEGG: bch:Bcen2424_1131 glutaredoxin 2 YP_001580356.1 KEGG: bur:Bcep18194_A4242 peptidase S1C, Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001580357.1 PFAM: MucB/RseB family protein; KEGG: bch:Bcen2424_1129 sigma E regulatory protein, MucB/RseB YP_001580358.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: bur:Bcep18194_A4240 anti sigma-E protein, RseA YP_001580359.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response YP_001580360.1 KEGG: bam:Bamb_1002 hypothetical protein YP_001580361.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001580362.1 carries the fatty acid chain in fatty acid biosynthesis YP_001580363.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001580364.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: bam:Bamb_0998 malonyl CoA-acyl carrier protein transacylase YP_001580365.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001580366.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_001580367.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001580368.1 PFAM: protein of unknown function DUF177; KEGG: bur:Bcep18194_A4230 protein of unknown function DUF177 YP_001580369.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_001580370.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bam:Bamb_0992 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001580371.1 PFAM: peptidase S49; KEGG: bch:Bcen2424_1115 peptidase S49 YP_001580372.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_1114 Rieske (2Fe-2S) domain protein YP_001580373.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_0989 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001580374.1 KEGG: bch:Bcen2424_1112 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001580375.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bur:Bcep18194_A4223 ribonuclease E and G YP_001580376.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_001580377.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis YP_001580378.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bch:Bcen2424_1107 molybdenum cofactor synthesis domain YP_001580379.1 KEGG: bam:Bamb_0982 hypothetical protein YP_001580380.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_1105 GCN5-related N-acetyltransferase YP_001580381.1 PFAM: protein of unknown function DUF195; KEGG: bur:Bcep18194_A4217 protein of unknown function DUF195 YP_001580382.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_0979 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001580383.1 KEGG: bur:Bcep18194_A4215 Na+/H+ antiporter NhaD and related arsenite permeases-like YP_001580384.1 PFAM: protein of unknown function DUF162; KEGG: bur:Bcep18194_A4214 protein of unknown function DUF162 YP_001580385.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_001580386.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_A4212 4Fe-4S ferredoxin YP_001580387.1 PFAM: CreA family protein; KEGG: bam:Bamb_0974 CreA family protein YP_001580388.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_A4210 transcriptional regulator, AraC family YP_001580389.1 PFAM: AzlC family protein; KEGG: bcn:Bcen_0617 AzlC-like YP_001580390.1 PFAM: branched-chain amino acid transport; KEGG: bvi:Bcep1808_1015 branched-chain amino acid transport YP_001580391.1 KEGG: bam:Bamb_0970 hypothetical protein YP_001580392.1 KEGG: bam:Bamb_0969 hypothetical protein YP_001580393.1 KEGG: bam:Bamb_0968 hypothetical protein YP_001580394.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bch:Bcen2424_1091 MATE efflux family protein YP_001580395.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_001580396.1 PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_0965 thioesterase superfamily protein YP_001580397.1 KEGG: bam:Bamb_0964 hypothetical protein YP_001580398.1 PFAM: regulatory protein ArsR; KEGG: bam:Bamb_0963 transcriptional regulator, ArsR family YP_001580399.1 KEGG: bam:Bamb_0962 hypothetical protein YP_001580400.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_001580401.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bch:Bcen2424_1084 sigma54 specific transcriptional regulator, fis family YP_001580402.1 KEGG: bch:Bcen2424_1083 hypothetical protein YP_001580403.1 PFAM: dihydrofolate reductase region; KEGG: bam:Bamb_0958 dihydrofolate reductase YP_001580404.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bvi:Bcep1808_1001 peptidase U62, modulator of DNA gyrase YP_001580405.1 PFAM: protein of unknown function DUF615; KEGG: bvi:Bcep1808_1000 protein of unknown function DUF615 YP_001580406.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis YP_001580407.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001580408.1 PFAM: peptidase M48 Ste24p; KEGG: bch:Bcen2424_1077 STE24 endopeptidase YP_001580409.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_001580410.1 KEGG: bur:Bcep18194_A4189 hypothetical protein YP_001580411.1 catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid YP_001580412.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4187 NUDIX hydrolase YP_001580413.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001580414.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001580415.1 Essential for efficient processing of 16S rRNA YP_001580416.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001580417.1 KEGG: bch:Bcen2424_1068 glucose/sorbosone dehydrogenase-like protein YP_001580418.1 KEGG: bur:Bcep18194_A4181 hypothetical protein YP_001580419.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bch:Bcen2424_1066 radical SAM domain protein YP_001580420.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bch:Bcen2424_3472 transposase IS116/IS110/IS902 family protein YP_001580421.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_0941 transcriptional regulator, AsnC family YP_001580422.1 catalyzes the oxidative deamination of D-amino acids YP_001580423.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bam:Bamb_0939 electron transfer flavoprotein, alpha subunit YP_001580424.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bur:Bcep18194_A4175 electron transfer flavoprotein beta-subunit YP_001580425.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_A4174 ABC metal ion transporter, periplasmic ligand binding protein YP_001580426.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_1060 binding-protein-dependent transport systems inner membrane component YP_001580427.1 part of the metNIQ transport system for methionine YP_001580428.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: bch:Bcen2424_1058 alpha/beta hydrolase fold YP_001580429.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4170 histone deacetylase superfamily YP_001580430.1 TIGRFAM: lytic murein transglycosylase B; KEGG: bam:Bamb_0932 lytic murein transglycosylase B YP_001580431.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide YP_001580432.1 KEGG: bam:Bamb_0930 helix-hairpin-helix motif YP_001580433.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bvi:Bcep1808_0974 ADP-L-glycero-D-manno-heptose-6-epimerase YP_001580434.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: bcn:Bcen_0573 RfaE bifunctional protein, domain I YP_001580435.1 KEGG: bch:Bcen2424_1051 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001580436.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bch:Bcen2424_1050 TPR repeat-containing protein YP_001580437.1 KEGG: bvi:Bcep1808_0970 hypothetical protein YP_001580438.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001580439.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001580440.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_001580441.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001580442.1 PFAM: Prephenate dehydrogenase; KEGG: bam:Bamb_0920 prephenate dehydrogenase YP_001580443.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: bch:Bcen2424_1043 chorismate mutase YP_001580444.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_001580445.1 KEGG: bur:Bcep18194_A4154 hypothetical protein YP_001580446.1 negatively supercoils closed circular double-stranded DNA YP_001580447.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_0915 OmpA/MotB domain protein YP_001580448.1 Involved in ubiquinone biosynthesis YP_001580449.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_A4150 2-phosphoglycolate phosphatase YP_001580450.1 PFAM: protein of unknown function UPF0060; KEGG: ajs:Ajs_1473 protein of unknown function UPF0060 YP_001580451.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1474 putative transcriptional regulator, MerR family YP_001580452.1 PFAM: Mercuric transport protein MerT; KEGG: ajs:Ajs_1475 mercuric transport protein MerT YP_001580453.1 TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1476 mercuric transport protein periplasmic component YP_001580454.1 KEGG: pol:Bpro_4795 hypothetical protein YP_001580455.1 KEGG: mms:mma_2680 uncharacterized conserved protein (phage related) YP_001580456.1 KEGG: mms:mma_2681 uncharacterized conserved protein (phage-related) YP_001580457.1 KEGG: mms:mma_2682 site-specific integrase/recombinase protein YP_001580458.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mca:MCA2654 prophage LambdaMc01, DNA methyltransferase YP_001580459.1 PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: mca:MCA2655 prophage LambdaMc01, DNA methyltransferase YP_001580460.1 KEGG: mms:mma_2759 hypothetical protein YP_001580461.1 PFAM: integrase family protein; KEGG: bja:bll2138 probable site-specific integrase/recombinase YP_001580462.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001580463.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sme:SMa2175 putative integrase/recombinase YP_001580464.1 PFAM: integrase family protein; KEGG: rle:pRL70045 putative integrase/recombinase YP_001580465.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001580466.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: hch:HCH_10021 DNA G:T-mismatch repair endonuclease YP_001580467.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mfa:Mfla_1173 phospholipase D/transphosphatidylase YP_001580468.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: mfa:Mfla_1172 phage transcriptional regulator, AlpA YP_001580469.1 PFAM: heat shock protein Hsp20; KEGG: maq:Maqu_3394 heat shock protein HSP20 YP_001580470.1 PFAM: Clp domain protein; KEGG: mfa:Mfla_1170 ATPase AAA-2 YP_001580471.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001580472.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1794 putative transposase-related ATP-binding subunit YP_001580473.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1170 ATPase AAA-2 YP_001580474.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mfa:Mfla_1169 phospholipase D/transphosphatidylase YP_001580475.1 KEGG: mfa:Mfla_1168 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001580476.1 KEGG: mfa:Mfla_1167 hypothetical protein YP_001580477.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001580478.1 KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001580479.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001580480.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001580481.1 PFAM: heat shock protein Hsp20; KEGG: mfa:Mfla_1166 heat shock protein HSP20 YP_001580482.1 KEGG: oan:Oant_4473 hypothetical protein YP_001580483.1 KEGG: oan:Oant_4474 hypothetical protein YP_001580484.1 KEGG: mfa:Mfla_1163 hypothetical protein YP_001580485.1 KEGG: mfa:Mfla_1162 hypothetical protein YP_001580486.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mfa:Mfla_1161 thioredoxin YP_001580487.1 KEGG: dde:Dde_3417 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001580488.1 KEGG: maq:Maqu_3389 hypothetical protein YP_001580489.1 PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_3419 peptidase, M48 family YP_001580490.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dde:Dde_3420 PDZ/DHR/GLGF YP_001580491.1 PFAM: glycoside hydrolase family 24; KEGG: dde:Dde_3421 prophage LambdaMc01, lysozyme YP_001580492.1 KEGG: mms:mma_2787 hypothetical protein YP_001580493.1 KEGG: mms:mma_2786 hypothetical protein YP_001580494.1 KEGG: mms:mma_2780 hypothetical protein YP_001580495.1 PFAM: protein of unknown function DUF1016; KEGG: rso:RSc2621 hypothetical protein YP_001580496.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_1284 NADPH-dependent FMN reductase YP_001580497.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ajs:Ajs_1283 arsenate reductase YP_001580498.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: ajs:Ajs_1282 arsenical-resistance protein YP_001580499.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: har:HEAR1963 arsenate reductase YP_001580500.1 SMART: regulatory protein ArsR; KEGG: har:HEAR1965 ARS R transcriptional regulator YP_001580501.1 PFAM: DNA repair protein RadC; KEGG: pau:PA14_31260 RadC-like protein YP_001580502.1 KEGG: rme:Rmet_1243 hypothetical protein YP_001580503.1 PFAM: protein of unknown function DUF932; KEGG: ajs:Ajs_2944 protein of unknown function DUF932 YP_001580504.1 PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_1245 ParB-like nuclease YP_001580505.1 KEGG: ajs:Ajs_2942 hypothetical protein YP_001580506.1 PFAM: protein of unknown function DUF736; KEGG: aav:Aave_0681 protein of unknown function DUF736 YP_001580507.1 PFAM: helix-turn-helix domain protein; KEGG: aav:Aave_0682 transcriptional regulator, XRE family YP_001580508.1 KEGG: aav:Aave_0683 putative lipoprotein YP_001580509.1 KEGG: zmo:ZMO1936 hypothetical protein YP_001580510.1 KEGG: rso:RSc2607 hypothetical protein YP_001580511.1 KEGG: bam:Bamb_1985 conserved hypothetical replication initiator and transcription repressor protein YP_001580512.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_2655 cobyrinic acid a,c-diamide synthase YP_001580513.1 KEGG: ajs:Ajs_2656 hypothetical protein YP_001580514.1 KEGG: ajs:Ajs_2657 hypothetical protein YP_001580515.1 KEGG: aav:Aave_0690 putative conjugal transfer TRAF transmembrane protein YP_001580516.1 KEGG: pau:PA14_31070 hypothetical protein YP_001580517.1 KEGG: rso:RSc2601 hypothetical/unknown protein YP_001580518.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: har:HEAR0537 sensory histidine kinase in two-component regulatory system with CusR, regulation of copper resistance, senses copper ions YP_001580519.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ajs:Ajs_1236 two component heavy metal response transcriptional regulator, winged helix family YP_001580520.1 TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: ajs:Ajs_1235 copper-resistance protein, CopA family YP_001580521.1 PFAM: copper resistance B precursor; KEGG: ajs:Ajs_1234 copper resistance B precursor YP_001580522.1 PFAM: copper resistance protein CopC; KEGG: reu:Reut_A2487 copper resistance protein CopC YP_001580523.1 PFAM: copper resistance D domain protein; KEGG: psb:Psyr_1496 copper resistance D YP_001580524.1 KEGG: rfr:Rfer_0420 hypothetical protein YP_001580525.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: pna:Pnap_4540 isoprenylcysteine carboxyl methyltransferase YP_001580526.1 PFAM: Heavy metal transport/detoxification protein; KEGG: pna:Pnap_4520 heavy metal transport/detoxification protein YP_001580527.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: neu:NE1216 haloacid dehalogenase/epoxide hydrolase family:E1-E2 ATPase YP_001580528.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2000 transcriptional regulator, LysR family YP_001580529.1 KEGG: bam:Bamb_2001 putative lipoprotein YP_001580530.1 type IV secretion VirD4 coupling protein family YP_001580531.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bam:Bamb_2003 CopG domain protein DNA-binding domain protein YP_001580532.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: bam:Bamb_2004 type II secretion system protein E YP_001580533.1 PFAM: Conjugal transfer protein TrbC; KEGG: aav:Aave_0727 conjugal transfer protein TrbC YP_001580534.1 KEGG: bam:Bamb_2006 putative conjugal transfer TrbD transmembrane protein YP_001580535.1 type IV secretion system VirB4 family YP_001580536.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bam:Bamb_2008 putative conjugal transfer TrbJ signal peptide protein YP_001580537.1 KEGG: bam:Bamb_2009 putative lipoprotein YP_001580538.1 type IV secretion VirB6 family YP_001580539.1 PFAM: Conjugal transfer protein; KEGG: bam:Bamb_2011 conjugal transfer protein YP_001580540.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bam:Bamb_2012 conjugal transfer protein TrbG/VirB9/CagX YP_001580541.1 PFAM: conjugation TrbI family protein; KEGG: bam:Bamb_2013 conjugation TrbI family protein YP_001580542.1 KEGG: shn:Shewana3_1292 hypothetical protein YP_001580543.1 KEGG: bur:Bcep18194_A4149 hypothetical protein YP_001580544.1 KEGG: bvi:Bcep1808_0956 hypothetical protein YP_001580545.1 PFAM: regulatory protein LysR; KEGG: bur:Bcep18194_A4147 transcriptional regulator of molybdate metabolism, LysR family YP_001580546.1 KEGG: bvi:Bcep1808_0954 NADH-ubiquinone oxidoreductase 24 kD subunit-like protein YP_001580547.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bch:Bcen2424_1032 NADH dehydrogenase (quinone) YP_001580548.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bch:Bcen2424_1031 formate dehydrogenase, alpha subunit YP_001580549.1 KEGG: bam:Bamb_0894 formate dehydrogenase, delta subunit YP_001580550.1 PFAM: monooxygenase FAD-binding; KEGG: bam:Bamb_0893 monooxygenase, FAD-binding YP_001580551.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bch:Bcen2424_1028 TPR repeat-containing protein YP_001580552.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bcn:Bcen_0548 general substrate transporter YP_001580553.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: bch:Bcen2424_1024 peptidase C26 YP_001580554.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_1023 transcriptional regulator, GntR family YP_001580555.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001580556.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein YP_001580557.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: bur:Bcep18194_A4132 protein of unknown function DUF182 YP_001580558.1 catalyzes the formation of inosine from adenosine YP_001580559.1 Catalyzes the deamination of guanine YP_001580560.1 PFAM: protein of unknown function UPF0016; KEGG: bam:Bamb_0880 protein of unknown function UPF0016 YP_001580561.1 KEGG: bvi:Bcep1808_0936 hypothetical protein YP_001580562.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A4126 peptidase M, neutral zinc metallopeptidase, zinc-binding site YP_001580563.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_001580564.1 KEGG: bch:Bcen2424_6656 hypothetical protein YP_001580565.1 KEGG: bxe:Bxe_A2614 hypothetical protein YP_001580566.1 PFAM: heat shock protein Hsp20; KEGG: bja:blr5221 small heat shock protein YP_001580567.1 PFAM: Transglycosylase-associated protein; KEGG: bvi:Bcep1808_0933 transglycosylase-associated protein YP_001580568.1 KEGG: bur:Bcep18194_A4120 hypothetical protein YP_001580569.1 KEGG: bam:Bamb_0871 hypothetical protein YP_001580570.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bur:Bcep18194_A4118 TonB-dependent receptor YP_001580571.1 KEGG: bam:Bamb_0869 hypothetical protein YP_001580572.1 KEGG: bch:Bcen2424_1008 hypothetical protein YP_001580573.1 catalyzes the interconversion of chorismate to prephenate YP_001580574.1 KEGG: bch:Bcen2424_1006 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC C subunit domain protein; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001580575.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bch:Bcen2424_1005 cold-shock DNA-binding domain protein YP_001580576.1 KEGG: bvi:Bcep1808_0922 hypothetical protein YP_001580577.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_0920 porin, gram-negative type YP_001580578.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001580579.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001580580.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001580581.1 KEGG: bvi:Bcep1808_0918 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001580582.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001580583.1 Essential for recycling GMP and indirectly, cGMP YP_001580584.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bur:Bcep18194_A4106 hypothetical protein YP_001580585.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001580586.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001580587.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001580588.1 KEGG: bur:Bcep18194_A4098 hypothetical protein YP_001580589.1 TIGRFAM: TonB family protein; KEGG: bur:Bcep18194_A4095 TonB-like protein YP_001580590.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4094 major facilitator superfamily (MFS_1) transporter YP_001580591.1 KEGG: bur:Bcep18194_A4093 hypothetical protein YP_001580592.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bur:Bcep18194_A4092 lipopolysaccharide heptosyltransferase I YP_001580593.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated YP_001580594.1 KEGG: bpm:BURPS1710b_3063 hypothetical protein YP_001580595.1 KEGG: bvi:Bcep1808_0902 hypothetical protein YP_001580596.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_001580597.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bvi:Bcep1808_0900 septum site-determining protein MinD YP_001580598.1 blocks the formation of polar Z-ring septums YP_001580599.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_0842 GCN5-related N-acetyltransferase YP_001580600.1 PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase YP_001580601.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001580602.1 KEGG: bur:Bcep18194_A4081 hypothetical protein YP_001580603.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bvi:Bcep1808_0893 AAA ATPase, central domain protein YP_001580604.1 participates with LolB in the incorporation of lipoprotein into the outer membrane YP_001580605.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bch:Bcen2424_0975 cell divisionFtsK/SpoIIIE YP_001580606.1 KEGG: bch:Bcen2424_0974 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001580607.1 PFAM: Smr protein/MutS2; KEGG: bur:Bcep18194_A4076 Smr protein/MutS2-like YP_001580608.1 PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_A4075 hypothetical protein YP_001580609.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4074 ABC sugar transporter, ATPase subunit YP_001580610.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_0886 binding-protein-dependent transport systems inner membrane component YP_001580611.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_0969 binding-protein-dependent transport systems inner membrane component YP_001580612.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A4071 ABC sugar transporter, periplasmic ligand binding protein YP_001580613.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001580614.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: bur:Bcep18194_A4069 6-phosphogluconolactonase YP_001580615.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate YP_001580616.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0824 drug resistance transporter, Bcr/CflA subfamily YP_001580617.1 KEGG: bch:Bcen2424_0962 hypothetical protein YP_001580618.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001580619.1 KEGG: bam:Bamb_0821 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_001580620.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001580621.1 KEGG: bch:Bcen2424_0958 hypothetical protein YP_001580622.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis YP_001580623.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001580624.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_001580625.1 PFAM: aminotransferase class I and II; KEGG: bam:Bamb_0815 aminotransferase, class I and II YP_001580626.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_0870 lytic transglycosylase, catalytic YP_001580627.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bam:Bamb_0811 UbiD family decarboxylases YP_001580628.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_0951 lysine exporter protein (LysE/YggA) YP_001580629.1 KEGG: bvi:Bcep1808_0867 hypothetical protein YP_001580630.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bam:Bamb_0808 NADP oxidoreductase, coenzyme F420-dependent YP_001580631.1 PFAM: protein of unknown function YGGT; KEGG: bam:Bamb_0807 protein of unknown function YGGT YP_001580632.1 PFAM: protein of unknown function DUF190; KEGG: bam:Bamb_0806 protein of unknown function DUF190 YP_001580633.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001580634.1 PFAM: Silent information regulator protein Sir2; KEGG: bur:Bcep18194_A4046 NAD-dependent protein deacetylase SIR2 family YP_001580635.1 PFAM: Chromate transporter; KEGG: bch:Bcen2424_0940 chromate transporter YP_001580636.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4041 chromate transporter YP_001580637.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_3959 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001580638.1 PFAM: transport-associated; KEGG: bxe:Bxe_B1679 transport-associated YP_001580639.1 KEGG: bam:Bamb_6157 porin, gram-negative type YP_001580640.1 KEGG: reu:Reut_B4688 hypothetical protein YP_001580641.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pla:Plav_1539 glyoxalase/bleomycin resistance protein/dioxygenase YP_001580642.1 PFAM: monooxygenase FAD-binding; KEGG: reu:Reut_B4679 monooxygenase, FAD-binding YP_001580643.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_0653 AMP-dependent synthetase and ligase YP_001580644.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001580645.1 KEGG: mpt:Mpe_A2686 putative LuxR-family regulatory protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: PAS domain containing protein YP_001580647.1 KEGG: bur:Bcep18194_A4374 lysophospholipase-like YP_001580648.1 KEGG: bch:Bcen2424_5935 hypothetical protein YP_001580649.1 PFAM: integrase family protein; KEGG: pol:Bpro_1953 putative integrase YP_001580650.1 KEGG: bbr:BB2573 putative lipoprotein YP_001580653.1 PFAM: Resolvase domain; KEGG: mag:amb4514 site-specific recombinase YP_001580654.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_001580655.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001580656.1 KEGG: bvi:Bcep1808_0847 hypothetical protein YP_001580657.1 PFAM: protein of unknown function UPF0153; KEGG: bam:Bamb_0792 protein of unknown function UPF0153 YP_001580658.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001580659.1 KEGG: bur:Bcep18194_A4017 hypothetical protein YP_001580660.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; KEGG: bam:Bamb_0789 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001580661.1 PFAM: Rhodanese domain protein; KEGG: bvi:Bcep1808_0842 rhodanese domain protein YP_001580662.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor YP_001580663.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bvi:Bcep1808_0841 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001580664.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_0909 inner-membrane translocator YP_001580665.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_0908 inner-membrane translocator YP_001580666.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bur:Bcep18194_A4011 ABC transporter, ATPase subunit YP_001580667.1 KEGG: bvi:Bcep1808_0837 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001580668.1 PFAM: Urease accessory protein UreD; KEGG: bur:Bcep18194_A4009 urease accessory protein UreD YP_001580669.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter YP_001580670.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active YP_001580671.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001580672.1 PFAM: UreE urease accessory domain protein; KEGG: bur:Bcep18194_A4005 UreE urease accessory-like YP_001580673.1 PFAM: Urease accessory protein UreF; KEGG: bch:Bcen2424_0898 urease accessory protein UreF YP_001580674.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bur:Bcep18194_A4003 urease accessory protein UreG YP_001580675.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A YP_001580676.1 KEGG: bch:Bcen2424_0895 hypothetical protein YP_001580677.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bch:Bcen2424_0894 lipopolysaccharide heptosyltransferase I YP_001580678.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bam:Bamb_0772 phosphomannomutase YP_001580679.1 PFAM: polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_A3989 membrane protein YP_001580680.1 PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_0891 glycosyl transferase, family 2 YP_001580681.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_0769 glycosyl transferase, group 1 YP_001580682.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bch:Bcen2424_0889 UDP-glucose 4-epimerase YP_001580683.1 PFAM: glycosyl transferase family 4; KEGG: bam:Bamb_0767 glycosyl transferase, family 4 YP_001580684.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_001580685.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_0765 polysaccharide biosynthesis protein CapD YP_001580686.1 PFAM: glycosyl transferase family 4; KEGG: bam:Bamb_0764 glycosyl transferase, family 4 YP_001580687.1 PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bch:Bcen2424_0885 NAD-dependent epimerase/dehydratase YP_001580688.1 KEGG: bch:Bcen2424_0884 glycosyl transferase, family 2 YP_001580689.1 KEGG: noc:Noc_2172 hypothetical protein YP_001580690.1 PFAM: glycosyl transferase group 1; KEGG: sth:STH1366 hypothetical protein YP_001580691.1 KEGG: sun:SUN_1733 hypothetical protein YP_001580692.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001580693.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001580694.1 KEGG: noc:Noc_2172 hypothetical protein YP_001580695.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_7436 methyltransferase type 11 YP_001580696.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_3643 ABC transporter related YP_001580697.1 PFAM: ABC-2 type transporter; KEGG: bvi:Bcep1808_0816 ABC-2 type transporter YP_001580698.1 KEGG: bch:Bcen2424_0874 dTDP-4-dehydrorhamnose reductase YP_001580699.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP YP_001580700.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: bvi:Bcep1808_0803 phospholipid/glycerol acyltransferase YP_001580701.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001580702.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001580703.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_001580704.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_001580705.1 PFAM: protein of unknown function DUF179; KEGG: bam:Bamb_0737 protein of unknown function DUF179 YP_001580706.1 KEGG: bch:Bcen2424_0863 hypothetical protein YP_001580707.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bte:BTH_I1460 rubredoxin YP_001580708.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bam:Bamb_0734 phosphomethylpyrimidine kinase type-1 YP_001580709.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001580710.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001580711.1 KEGG: bur:Bcep18194_A3947 hypothetical protein YP_001580712.1 KEGG: bur:Bcep18194_A3946 hypothetical protein YP_001580713.1 KEGG: bur:Bcep18194_A3945 hypothetical protein YP_001580714.1 KEGG: bam:Bamb_0728 putative transmembrane anti-sigma factor YP_001580715.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_0788 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001580716.1 Secreted repeat of unknown function; PFAM: Secreted repeat of unknown function; KEGG: bam:Bamb_0726 secreted repeat of unknown function YP_001580717.1 KEGG: bcn:Bcen_0369 hypothetical protein YP_001580718.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_0850 D-amino-acid dehydrogenase YP_001580719.1 PFAM: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_0849 extracellular solute-binding protein, family 3 YP_001580720.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bch:Bcen2424_0848 ornithine cyclodeaminase/mu-crystallin YP_001580721.1 PFAM: YheO domain protein; KEGG: bam:Bamb_0722 YheO domain protein YP_001580722.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A3936 DsbA oxidoreductase YP_001580723.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3935 drug resistance transporter EmrB/QacA subfamily YP_001580724.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A3934 protein of unknown function DUF81 YP_001580725.1 KEGG: bvi:Bcep1808_0779 hypothetical protein YP_001580726.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bam:Bamb_0718 transport-associated YP_001580727.1 KEGG: bur:Bcep18194_A3930 TRAP-type uncharacterized transport system periplasmic component-like YP_001580728.1 PFAM: DSBA oxidoreductase; KEGG: bvi:Bcep1808_0776 DsbA oxidoreductase YP_001580729.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_0715 transcriptional regulator, LysR family YP_001580730.1 KEGG: bch:Bcen2424_0835 hypothetical protein YP_001580731.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: bur:Bcep18194_A3926 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like YP_001580732.1 KEGG: bch:Bcen2424_0833 hypothetical protein; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001580733.1 TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bch:Bcen2424_0832 2Fe-2S ferredoxin, iron-sulfur binding site YP_001580734.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3923 hypothetical protein YP_001580735.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: bam:Bamb_0709 protein of unknown function DUF6, transmembrane YP_001580736.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_0829 transcriptional regulator, AraC family YP_001580737.1 PFAM: aminotransferase class V; KEGG: bch:Bcen2424_0828 aminotransferase, class V YP_001580738.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_0763 transcriptional regulator, LysR family YP_001580739.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A3918 D-isomer specific 2-hydroxyacid dehydrogenase YP_001580740.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bam:Bamb_0704 cob(II)yrinic acid a,c-diamide reductase YP_001580741.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3916 major facilitator superfamily (MFS_1) transporter YP_001580742.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0703 major facilitator superfamily MFS_1 YP_001580743.1 KEGG: bur:Bcep18194_A3914 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001580744.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_001580745.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0700 major facilitator superfamily MFS_1 YP_001580746.1 KEGG: bur:Bcep18194_A3911 hypothetical protein YP_001580747.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bam:Bamb_0698 monooxygenase, FAD-binding YP_001580748.1 PFAM: EAL domain protein; KEGG: bam:Bamb_0697 diguanylate phosphodiesterase YP_001580749.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bch:Bcen2424_0815 glutathione-dependent formaldehyde-activating, GFA YP_001580750.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_0695 transcriptional regulator, IclR family YP_001580751.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bch:Bcen2424_0813 acyl-CoA dehydrogenase domain protein YP_001580752.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_A3905 peroxidase YP_001580753.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bur:Bcep18194_A3904 protein of unknown function DUF883, ElaB YP_001580754.1 KEGG: bur:Bcep18194_A3903 membrane protein YP_001580755.1 KEGG: bur:Bcep18194_A3902 hypothetical protein YP_001580756.1 KEGG: bur:Bcep18194_A3901 putative Tfp pilus assembly protein PilE YP_001580757.1 KEGG: bam:Bamb_0688 hypothetical protein YP_001580758.1 KEGG: bam:Bamb_0687 prepilin-type cleavage/methylation-like protein YP_001580759.1 KEGG: bam:Bamb_0686 hypothetical protein YP_001580760.1 KEGG: bur:Bcep18194_A3897 Tfp pilus assembly protein FimT-like YP_001580761.1 PFAM: ATP-cone domain protein; KEGG: bvi:Bcep1808_0739 ATP-cone domain protein YP_001580762.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001580763.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3894 short-chain dehydrogenase/reductase SDR YP_001580764.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_0681 4-hydroxybenzoyl-CoA thioesterase YP_001580765.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bam:Bamb_0680 MotA/TolQ/ExbB proton channel YP_001580766.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bch:Bcen2424_0802 biopolymer transport protein ExbD/TolR YP_001580767.1 TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: bur:Bcep18194_A3890 TonB/TolA-like protein YP_001580768.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA YP_001580769.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_0676 OmpA/MotB domain protein YP_001580770.1 TIGRFAM: tol-pal system protein YbgF; KEGG: bvi:Bcep1808_0730 hypothetical protein YP_001580771.1 PFAM: PAAR repeat-containing protein; KEGG: bvi:Bcep1808_2274 PaaR repeat-containing protein YP_001580772.1 KEGG: bur:Bcep18194_A4515 hypothetical protein YP_001580773.1 KEGG: bvi:Bcep1808_2273 hypothetical protein YP_001580774.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3879 transcriptional regulator, AraC family YP_001580775.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_0666 alkylhydroperoxidase like protein, AhpD family YP_001580776.1 PFAM: glutamine amidotransferase class-II; KEGG: bch:Bcen2424_0787 glutamine amidotransferase, class-II YP_001580777.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bch:Bcen2424_0871 dTDP-glucose 4,6-dehydratase YP_001580778.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bch:Bcen2424_0872 glucose-1-phosphate thymidylyltransferase YP_001580779.1 KEGG: bch:Bcen2424_0873 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001580780.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bch:Bcen2424_0874 dTDP-4-dehydrorhamnose reductase YP_001580781.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bbr:BB2918 putative type I polyketide synthase YP_001580782.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: bbr:BB2919 putative polyketide synthase YP_001580783.1 KEGG: sse:Ssed_3008 hydrolase (HAD superfamily)-like protein YP_001580784.1 PFAM: glycosyl transferase family 2; KEGG: sse:Ssed_3009 glycosyl transferase, family 2 YP_001580785.1 KEGG: pat:Patl_3209 hypothetical protein YP_001580786.1 PFAM: glycoside hydrolase family 16; KEGG: fjo:Fjoh_4177 glycoside hydrolase, family 16 YP_001580787.1 PFAM: protein of unknown function DUF23; KEGG: nha:Nham_1056 protein of unknown function DUF23 YP_001580788.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppf:Pput_3903 ABC transporter related YP_001580789.1 KEGG: ppf:Pput_3902 ABC-2 type transporter YP_001580790.1 PFAM: polysaccharide export protein; KEGG: ppf:Pput_3905 polysaccharide export protein YP_001580791.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ppf:Pput_3904 lipopolysaccharide biosynthesis protein YP_001580792.1 KEGG: ppf:Pput_3926 glycosyl transferase, family 2 YP_001580793.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001580794.1 PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_0878 glycosyl transferase, family 2 YP_001580795.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001580796.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: smd:Smed_0193 capsule polysaccharide biosynthesis protein YP_001580797.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ppf:Pput_3912 capsule polysaccharide biosynthesis protein YP_001580798.1 KEGG: mes:Meso_2759 hypothetical protein YP_001580799.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB2921 putative oxidoreductase YP_001580800.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A3855 MscS mechanosensitive ion channel YP_001580801.1 PFAM: SNARE associated Golgi protein; KEGG: bvi:Bcep1808_0725 putative DedA family transmembrane protein YP_001580802.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_001580803.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001580804.1 KEGG: bur:Bcep18194_A3849 hypothetical protein YP_001580805.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001580806.1 TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: bam:Bamb_0654 chromosomal replication initiator, DnaA YP_001580807.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: bvi:Bcep1808_0719 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_001580808.1 KEGG: bur:Bcep18194_A3845 poly(A) polymerase, PcnB; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_001580809.1 KEGG: bch:Bcen2424_0757 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_001580810.1 PFAM: deoxynucleoside kinase; KEGG: bam:Bamb_0650 deoxynucleoside kinase YP_001580811.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001580812.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: bch:Bcen2424_0754 para-aminobenzoate synthase, subunit I YP_001580813.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001580814.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001580815.1 KEGG: bvi:Bcep1808_0711 hypothetical protein YP_001580816.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_001580817.1 KEGG: bvi:Bcep1808_0709 hypothetical protein YP_001580818.1 PFAM: RNA-binding S4 domain protein; KEGG: bur:Bcep18194_A3836 RNA-binding S4 YP_001580819.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_001580820.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001580821.1 catalyzes the phosphorylation of NAD to NADP YP_001580822.1 KEGG: bch:Bcen2424_0743 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; SMART: AAA ATPase YP_001580823.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_001580824.1 KEGG: bch:Bcen2424_0741 hypothetical protein YP_001580825.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bch:Bcen2424_0740 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001580826.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bvi:Bcep1808_0700 peptidase U62, modulator of DNA gyrase YP_001580827.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001580828.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_0629 prevent-host-death family protein YP_001580829.1 PFAM: PilT protein domain protein; KEGG: bur:Bcep18194_A3824 PilT protein-like YP_001580830.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bch:Bcen2424_0737 globin YP_001580831.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bch:Bcen2424_0736 ATP--cobalamin adenosyltransferase YP_001580832.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3821 FAD linked oxidase-like YP_001580833.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_A3820 FAD linked oxidase-like YP_001580834.1 PFAM: FAD linked oxidase domain protein; KEGG: bvi:Bcep1808_0694 FAD linked oxidase domain protein YP_001580835.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bam:Bamb_0622 protein of unknown function DUF224, cysteine-rich region domain protein YP_001580836.1 PFAM: alanine racemase domain protein; KEGG: bch:Bcen2424_0731 protein of unknown function UPF0001 YP_001580837.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate YP_001580838.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway YP_001580839.1 PFAM: Ferritin Dps family protein; KEGG: bam:Bamb_0618 ferritin, Dps family protein YP_001580840.1 KEGG: bpd:BURPS668_3321 hypothetical protein YP_001580841.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bam:Bamb_0616 catalase/peroxidase HPI YP_001580842.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3813 transcriptional regulator, LysR family YP_001580843.1 catalyzes branch migration in Holliday junction intermediates YP_001580844.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001580845.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_001580846.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_001580847.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001580848.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001580849.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_0608 major facilitator superfamily MFS_1 YP_001580850.1 PFAM: YceI family protein; KEGG: bvi:Bcep1808_0677 YceI family protein YP_001580851.1 PFAM: YceI family protein; KEGG: bur:Bcep18194_A3803 conserved hypothetical protein, YceI YP_001580852.1 PFAM: cytochrome B561; KEGG: bur:Bcep18194_A3802 cytochrome b561 YP_001580853.1 PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_A3801 paraquat-inducible protein A YP_001580854.1 PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_A3800 paraquat-inducible protein A YP_001580855.1 PFAM: Mammalian cell entry related domain protein; KEGG: bur:Bcep18194_A3799 mammalian cell entry related-protein YP_001580856.1 PFAM: protein of unknown function DUF330; KEGG: bvi:Bcep1808_0671 protein of unknown function DUF330 YP_001580857.1 KEGG: bch:Bcen2424_0709 site-specific recombinase-like protein YP_001580858.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: bam:Bamb_0598 putative RNA methylase YP_001580859.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_0668 glyoxalase/bleomycin resistance protein/dioxygenase YP_001580860.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: bam:Bamb_0596 helix-turn-helix, type 11 domain protein YP_001580861.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bam:Bamb_0595 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001580862.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_0703 transcriptional regulator, LysR family YP_001580863.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bch:Bcen2424_0702 NAD(P) transhydrogenase, beta subunit YP_001580864.1 KEGG: bch:Bcen2424_0701 NAD/NADP transhydrogenase alpha subunit-like protein YP_001580865.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bch:Bcen2424_0700 alanine dehydrogenase/PNT domain protein YP_001580866.1 PFAM: NUDIX hydrolase; KEGG: bvi:Bcep1808_0664 NUDIX hydrolase YP_001580867.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001580868.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bch:Bcen2424_0697 glutamate synthase (NADPH) YP_001580869.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_0589 glutathione S-transferase, N-terminal domain YP_001580870.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bam:Bamb_0588 peptidase M24 YP_001580871.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A3780 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 YP_001580872.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: bam:Bamb_0586 putative TIM-barrel protein, nifR3 family YP_001580873.1 PFAM: helix-turn-helix Fis-type; KEGG: bur:Bcep18194_A3778 transcriptional regulator, fis family YP_001580874.1 involved in de novo purine biosynthesis YP_001580875.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001580876.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001580877.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001580878.1 KEGG: bvi:Bcep1808_0652 hypothetical protein YP_001580879.1 PFAM: Phosphoglycerate mutase; KEGG: bch:Bcen2424_0685 phosphoglycerate mutase YP_001580880.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_001580881.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_001580882.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001580883.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors YP_001580884.1 forms a direct contact with the tRNA during translation YP_001580885.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001580886.1 KEGG: bch:Bcen2424_0678 hypothetical protein YP_001580887.1 PFAM: OsmC family protein; KEGG: bvi:Bcep1808_0643 OsmC family protein YP_001580888.1 KEGG: bch:Bcen2424_0676 hypothetical protein YP_001580889.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001580890.1 PFAM: glutamine amidotransferase class-II; KEGG: bch:Bcen2424_0674 glutamine amidotransferase, class-II YP_001580891.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bur:Bcep18194_A3759 outer membrane autotransporter barrel YP_001580892.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpd:BURPS668_3393 glutamate/aspartate ABC transporter, ATP-binding protein YP_001580893.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_0637 polar amino acid ABC transporter, inner membrane subunit YP_001580894.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_0670 polar amino acid ABC transporter, inner membrane subunit YP_001580895.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_0564 extracellular solute-binding protein, family 3 YP_001580896.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bvi:Bcep1808_0634 Glu/Leu/Phe/Val dehydrogenase, C terminal YP_001580897.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3753 transcriptional regulator, LysR family YP_001580898.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001580899.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3751 FAD dependent oxidoreductase YP_001580900.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bam:Bamb_0559 transcriptional regulator, TetR family YP_001580901.1 KEGG: bam:Bamb_0558 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_001580902.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bur:Bcep18194_A3748 gluconate transporter YP_001580903.1 KEGG: bur:Bcep18194_A3747 2-dehydro-3-deoxyphosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_001580904.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001580905.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A3745 transcriptional regulator, RpiR family YP_001580906.1 KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001580907.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001580908.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001580909.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_0553 conserved hypothetical protein 701 YP_001580910.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001580911.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA YP_001580912.1 PFAM: Rare lipoprotein B; KEGG: bch:Bcen2424_0655 rare lipoprotein B YP_001580913.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_001580914.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bam:Bamb_0548 biopolymer transport protein ExbD/TolR YP_001580915.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bam:Bamb_0547 MotA/TolQ/ExbB proton channel YP_001580916.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001580917.1 PFAM: SmpA/OmlA domain protein; KEGG: bam:Bamb_0545 SmpA/OmlA domain protein YP_001580918.1 PFAM: ferric-uptake regulator; KEGG: bch:Bcen2424_0649 ferric uptake regulator, Fur family YP_001580919.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001580920.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_001580921.1 involved in the transport of C4-dicarboxylates across the membrane YP_001580922.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bcn:Bcen_0162 GntR-like YP_001580923.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source YP_001580924.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcn:Bcen_0160 major facilitator superfamily MFS_1 YP_001580926.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1773 enoyl-CoA hydratase/carnithine racemase YP_001580927.1 PFAM: regulatory protein MarR; KEGG: reh:H16_B1774 transcriptional regulator, MarR-family YP_001580928.1 KEGG: bvi:Bcep1808_0612 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001580929.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_001580930.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_001580931.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A3720 glyoxalase/bleomycin resistance protein/dioxygenase YP_001580932.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001580933.1 KEGG: bvi:Bcep1808_0607 hypothetical protein YP_001580934.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bam:Bamb_0533 guanine-specific ribonuclease N1 and T1 YP_001580935.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate YP_001580936.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP YP_001580937.1 PFAM: phosphatidylglycerophosphatase A; KEGG: bam:Bamb_0530 phosphatidylglycerophosphatase A YP_001580938.1 PFAM: CinA domain protein; KEGG: bvi:Bcep1808_0602 CinA domain protein YP_001580939.1 KEGG: bam:Bamb_0528 hypothetical protein YP_001580940.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001580941.1 PFAM: Aldose 1-epimerase; KEGG: bch:Bcen2424_0625 aldose 1-epimerase YP_001580942.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A3706 short-chain dehydrogenase/reductase SDR YP_001580943.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001580944.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001580945.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_0621 periplasmic binding protein/LacI transcriptional regulator YP_001580946.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_0521 short-chain dehydrogenase/reductase SDR YP_001580947.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism YP_001580948.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bur:Bcep18194_A3700 2-keto-3-deoxy-galactonokinase YP_001580949.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_0518 transcriptional regulator, IclR family YP_001580950.1 KEGG: bam:Bamb_0517 hypothetical protein YP_001580951.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bch:Bcen2424_0615 peptidase S10, serine carboxypeptidase YP_001580952.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan YP_001580953.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001580954.1 PFAM: ribonuclease II; KEGG: bam:Bamb_0513 ribonuclease II YP_001580955.1 PFAM: protein of unknown function UPF0227; KEGG: bur:Bcep18194_A3693 protein of unknown function UPF0227 YP_001580956.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bam:Bamb_0511 UDP-N-acetylmuramate YP_001580957.1 KEGG: bch:Bcen2424_0609 hypothetical protein YP_001580958.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bch:Bcen2424_0607 redoxin domain protein YP_001580959.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001580960.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001580961.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_001580962.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_001580963.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: bur:Bcep18194_A3685 hypothetical protein YP_001580964.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bvi:Bcep1808_0576 redoxin domain protein YP_001580965.1 PFAM: PfkB domain protein; KEGG: bam:Bamb_0502 PfkB domain protein YP_001580966.1 PFAM: 17 kDa surface antigen; KEGG: bvi:Bcep1808_0574 17 kDa surface antigen YP_001580967.1 KEGG: bam:Bamb_0500 hypothetical protein YP_001580968.1 KEGG: bam:Bamb_0499 hypothetical protein YP_001580969.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001580970.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001580971.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bvi:Bcep1808_0569 N-acetylmuramoyl-L-alanine amidase, family 2 YP_001580972.1 KEGG: bch:Bcen2424_0592 hypothetical protein YP_001580973.1 PFAM: cytochrome c assembly protein; KEGG: bam:Bamb_0494 cytochrome c assembly protein YP_001580974.1 KEGG: bvi:Bcep1808_0566 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001580975.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively YP_001580976.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bam:Bamb_0491 multiple antibiotic resistance (MarC)-related proteins YP_001580977.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001580978.1 hydrolyzes diadenosine polyphosphate YP_001580979.1 PFAM: Protein of unknown function CNP1-like; KEGG: bur:Bcep18194_A3670 hypothetical protein YP_001580980.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001580981.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_001580982.1 involved in the peptidyltransferase reaction during translation YP_001580983.1 PFAM: ribosomal protein L21; KEGG: bam:Bamb_0484 ribosomal protein L21 YP_001580984.1 PFAM: Polyprenyl synthetase; KEGG: bam:Bamb_0483 trans-hexaprenyltranstransferase YP_001580985.1 KEGG: mmr:Mmar10_2345 putative site-specific recombinase, phage integrase family protein YP_001580988.1 SMART: AAA ATPase; KEGG: pnu:Pnuc_1685 hypothetical protein YP_001580989.1 KEGG: bch:Bcen2424_0922 hypothetical protein YP_001580990.1 KEGG: bch:Bcen2424_0922 hypothetical protein YP_001580991.1 KEGG: rme:Rmet_5344 hypothetical protein YP_001580992.1 KEGG: rme:Rmet_5343 hypothetical protein YP_001580993.1 PFAM: integrase family protein; KEGG: pnu:Pnuc_1839 phage integrase family protein YP_001580995.1 KEGG: pnu:Pnuc_2061 hypothetical protein YP_001580996.1 KEGG: pnu:Pnuc_1126 hypothetical protein YP_001580997.1 KEGG: bpl:BURPS1106A_3893 hypothetical protein YP_001580998.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bch:Bcen2424_0579 protein of unknown function DUF21 YP_001580999.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: bch:Bcen2424_0578 type II secretion system protein E YP_001581000.1 PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A3662 type II secretion system protein F YP_001581001.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: bam:Bamb_0479 prepilin peptidase YP_001581002.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_001581003.1 PFAM: protein of unknown function DUF1342; KEGG: bam:Bamb_0477 protein of unknown function DUF1342 YP_001581004.1 PFAM: protein of unknown function DUF329; KEGG: bur:Bcep18194_A3658 protein of unknown function DUF329 YP_001581005.1 PFAM: NUDIX hydrolase; KEGG: bam:Bamb_0475 NUDIX hydrolase YP_001581006.1 PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: bur:Bcep18194_A3656 protein of unknown function DUF815 YP_001581007.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_001581008.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_001581009.1 KEGG: bur:Bcep18194_A3653 hypothetical protein YP_001581010.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001581011.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bch:Bcen2424_0565 redoxin domain protein YP_001581012.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_001581013.1 PFAM: cell division protein FtsA; KEGG: bam:Bamb_0467 cell division protein FtsA YP_001581014.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bch:Bcen2424_0562 polypeptide-transport-associated domain protein, FtsQ-type YP_001581015.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001581016.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001581017.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001581018.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bch:Bcen2424_0558 cell division protein FtsW YP_001581019.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001581020.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001581021.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bch:Bcen2424_0555 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001581022.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_001581023.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bam:Bamb_0457 peptidoglycan glycosyltransferase YP_001581024.1 PFAM: cell division protein FtsL; KEGG: bur:Bcep18194_A3638 cell division protein, FtsL -like YP_001581025.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bur:Bcep18194_A3637 methyltransferase YP_001581026.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_001581027.1 KEGG: bam:Bamb_0453 ubiquinone biosynthesis protein COQ7-like protein YP_001581028.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_0452 porin, gram-negative type YP_001581029.1 activates fatty acids by binding to coenzyme A YP_001581030.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bch:Bcen2424_0545 molybdopterin oxidoreductase YP_001581031.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001581032.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A3630 phenylacetic acid degradation protein paaN2 YP_001581033.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA YP_001581034.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001581035.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bvi:Bcep1808_0517 phenylacetic acid degradation protein PaaD YP_001581036.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bam:Bamb_0444 phenylacetate-CoA ligase YP_001581037.1 PFAM: MltA domain protein; 3D domain protein; KEGG: bam:Bamb_0443 MltA domain protein YP_001581038.1 protein associated with Co2+ and Mg2+ efflux YP_001581039.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_001581040.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_0440 phosphoglycolate phosphatase YP_001581041.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_001581042.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_001581043.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001581044.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_001581045.1 PFAM: adenylate cyclase; KEGG: bam:Bamb_0435 adenylate cyclase YP_001581046.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_001581047.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_A3615 (acyl-carrier protein) phosphodiesterase YP_001581048.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bch:Bcen2424_0527 peptidase M61 domain protein YP_001581049.1 KEGG: bch:Bcen2424_0526 protein-disulfide isomerase-like protein YP_001581050.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bam:Bamb_0430 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001581052.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001581053.1 PFAM: Radical SAM domain protein; KEGG: bam:Bamb_0428 radical SAM domain protein YP_001581054.1 KEGG: bur:Bcep18194_A3610 alpha/beta hydrolase YP_001581056.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: plu:plu0856 hypothetical protein YP_001581057.1 TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: bam:Bamb_0426 GabA permease YP_001581058.1 PFAM: protein of unknown function DUF661; KEGG: bur:Bcep18194_A3608 protein of unknown function DUF661 YP_001581059.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0520 major facilitator superfamily MFS_1 YP_001581060.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A3606 transcriptional regulator, LysR family YP_001581061.1 KEGG: bur:Bcep18194_A3605 hypothetical protein YP_001581062.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001581063.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bvi:Bcep1808_0497 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001581064.1 PFAM: isochorismatase hydrolase; KEGG: bch:Bcen2424_0515 isochorismatase hydrolase YP_001581065.1 PFAM: creatinase; peptidase M24; KEGG: bam:Bamb_0418 peptidase M24 YP_001581066.1 KEGG: bvi:Bcep1808_0494 hypothetical protein YP_001581067.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_A3599 two component transcriptional regulator, winged helix family YP_001581068.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001581069.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001581070.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: bch:Bcen2424_0509 modification methylase, HemK family YP_001581071.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bvi:Bcep1808_0489 glutaredoxin-like protein YP_001581072.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate YP_001581073.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bam:Bamb_0410 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001581074.1 PFAM: amino acid permease-associated region; KEGG: bvi:Bcep1808_0486 amino acid permease-associated region YP_001581075.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_A3591 cold-shock DNA-binding domain protein YP_001581076.1 KEGG: bam:Bamb_0407 molecular chaperone-like protein YP_001581077.1 PFAM: nitroreductase; KEGG: bvi:Bcep1808_0483 nitroreductase YP_001581078.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_0405 major facilitator superfamily MFS_1 YP_001581079.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_0499 transcriptional regulator, TetR family YP_001581080.1 PFAM: protein of unknown function DUF1415; KEGG: bur:Bcep18194_A3586 protein of unknown function DUF1415 YP_001581081.1 KEGG: bam:Bamb_0402 hypothetical protein YP_001581082.1 PFAM: methyltransferase small; KEGG: bch:Bcen2424_0496 methyltransferase small YP_001581083.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: bur:Bcep18194_A3583 hypothetical protein YP_001581084.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A3582 peptidase M1, membrane alanine aminopeptidase YP_001581085.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bur:Bcep18194_A3578 Mg2+ transporter protein, CorA-like YP_001581086.1 KEGG: bam:Bamb_0395 hypothetical protein YP_001581087.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bch:Bcen2424_0486 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins YP_001581088.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bam:Bamb_0393 ImcF domain protein YP_001581089.1 KEGG: bam:Bamb_0392 hypothetical protein YP_001581090.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_0391 OmpA/MotB domain protein YP_001581091.1 KEGG: bcn:Bcen_2628 hypothetical protein YP_001581092.1 KEGG: bch:Bcen2424_0477 hypothetical protein YP_001581093.1 KEGG: bch:Bcen2424_0478 hypothetical protein YP_001581095.1 KEGG: bch:Bcen2424_0477 hypothetical protein YP_001581096.1 KEGG: bch:Bcen2424_0477 hypothetical protein YP_001581097.1 KEGG: bur:Bcep18194_A3569 hypothetical protein YP_001581099.1 KEGG: bch:Bcen2424_0478 hypothetical protein YP_001581100.1 KEGG: bch:Bcen2424_0479 hypothetical protein YP_001581101.1 KEGG: bch:Bcen2424_0477 hypothetical protein YP_001581102.1 KEGG: bch:Bcen2424_0476 hypothetical protein YP_001581103.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bch:Bcen2424_0475 rhs element Vgr protein YP_001581104.1 TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: bam:Bamb_0388 ImpA domain protein YP_001581105.1 KEGG: bch:Bcen2424_0473 ATPase AAA-2 domain protein; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001581106.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bvi:Bcep1808_0465 protein of unknown function DUF1305 YP_001581107.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_A3563 protein of unknown function DUF879 YP_001581108.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bch:Bcen2424_0470 protein of unknown function DUF1316 YP_001581109.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bvi:Bcep1808_0462 protein of unknown function DUF796 YP_001581110.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bvi:Bcep1808_0461 protein of unknown function DUF877 YP_001581111.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A3559 hypothetical protein YP_001581112.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bvi:Bcep1808_0459 tetratricopeptide TPR_2 repeat protein YP_001581113.1 KEGG: bch:Bcen2424_0465 hypothetical protein YP_001581114.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bam:Bamb_0378 protein of unknown function DUF876 YP_001581115.1 KEGG: bur:Bcep18194_A3555 hypothetical protein YP_001581116.1 KEGG: bur:Bcep18194_A3554 hypothetical protein YP_001581117.1 PFAM: transposase mutator type; KEGG: bte:BTH_II0431 transposase, mutator family YP_001581118.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2990 glutathione S-transferase, N-terminal domain YP_001581119.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001581120.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001581121.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_2945 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001581122.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bvi:Bcep1808_3037 dihydrodipicolinate synthase YP_001581123.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2949 transcriptional regulator, LysR family YP_001581124.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_2995 major facilitator superfamily MFS_1 YP_001581125.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_2996 TonB-dependent siderophore receptor YP_001581126.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2997 glutathione S-transferase, N-terminal domain YP_001581127.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6304 transcriptional regulator, LysR family YP_001581128.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_2999 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001581129.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bch:Bcen2424_2954 molybdopterin dehydrogenase, FAD-binding YP_001581130.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_3001 ferredoxin; (2Fe-2S)-binding domain protein YP_001581131.1 KEGG: bam:Bamb_3002 hypothetical protein YP_001581132.1 KEGG: bur:Bcep18194_A6306 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001581133.1 PFAM: protein of unknown function DUF1234; KEGG: bam:Bamb_3004 protein of unknown function DUF1234 YP_001581134.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_3005 glyoxalase/bleomycin resistance protein/dioxygenase YP_001581135.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_3006 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001581136.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA YP_001581137.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A6310 YbaK/prolyl-tRNA synthetase like protein YP_001581138.1 PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_3050 protein of unknown function DUF1289 YP_001581139.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_2962 protein of unknown function DUF6, transmembrane YP_001581140.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_2963 transcriptional regulator, AsnC family YP_001581141.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_3053 alpha/beta hydrolase fold YP_001581142.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bam:Bamb_3013 2-nitropropane dioxygenase, NPD YP_001581143.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_2967 transcriptional regulator, LysR family YP_001581144.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A6317 outer membrane protein, (porin) YP_001581145.1 KEGG: bur:Bcep18194_A6318 hypothetical protein YP_001581146.1 PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_A6319 bile acid/sodium symporter YP_001581147.1 PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: bch:Bcen2424_2971 diguanylate cyclase/phosphodiesterase YP_001581148.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_3019 transcriptional regulator, LacI family YP_001581149.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bch:Bcen2424_2973 N-acylglucosamine 2-epimerase YP_001581150.1 PFAM: PfkB domain protein; KEGG: bch:Bcen2424_2974 PfkB domain protein YP_001581151.1 KEGG: bch:Bcen2424_2975 hypothetical protein YP_001581152.1 KEGG: bam:Bamb_3023 hypothetical protein YP_001581153.1 PFAM: protein of unknown function DUF185; KEGG: bur:Bcep18194_A6326 protein of unknown function DUF185 YP_001581154.1 KEGG: bam:Bamb_3025 short-chain dehydrogenase/reductase SDR YP_001581155.1 KEGG: bur:Bcep18194_A6328 dihydroneopterin aldolase YP_001581156.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_001581157.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: bch:Bcen2424_2981 UDP-N-acetylglucosamine pyrophosphorylase YP_001581158.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_001581159.1 KEGG: bam:Bamb_3031 transcriptional regulator-like protein YP_001581160.1 KEGG: bur:Bcep18194_A6334 hypothetical protein YP_001581161.1 KEGG: bam:Bamb_3033 hypothetical protein YP_001581162.1 PFAM: iron permease FTR1; KEGG: bur:Bcep18194_A6336 iron permease FTR1 YP_001581163.1 KEGG: bur:Bcep18194_A6337 hypothetical protein YP_001581164.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bvi:Bcep1808_3075 heavy metal transport/detoxification protein YP_001581165.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3037 aldehyde dehydrogenase (NAD(+)) YP_001581166.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_3038 transcriptional regulator, XRE family with cupin sensor YP_001581167.1 KEGG: bam:Bamb_3039 hypothetical protein YP_001581168.1 PFAM: peptidase C26; KEGG: bam:Bamb_3040 peptidase C26 YP_001581169.1 PFAM: glutamine synthetase catalytic region; KEGG: bch:Bcen2424_2994 glutamate--ammonia ligase YP_001581170.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_3042 aminotransferase class-III YP_001581171.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_3043 extracellular solute-binding protein, family 1 YP_001581172.1 KEGG: bam:Bamb_3044 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001581173.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_2998 binding-protein-dependent transport systems inner membrane component YP_001581174.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3046 binding-protein-dependent transport systems inner membrane component YP_001581175.1 KEGG: bam:Bamb_3047 hypothetical protein YP_001581176.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6350 FAD dependent oxidoreductase YP_001581177.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_3049 FAD dependent oxidoreductase YP_001581178.1 PFAM: protein of unknown function DUF799; KEGG: bch:Bcen2424_3003 protein of unknown function DUF799 YP_001581179.1 KEGG: bch:Bcen2424_3004 hypothetical protein YP_001581180.1 PFAM: Curli production assembly/transport component CsgG; KEGG: bch:Bcen2424_3005 curli production assembly/transport component CsgG YP_001581181.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bam:Bamb_3050 glutathione-disulfide reductase YP_001581182.1 KEGG: bur:Bcep18194_A6353 hypothetical protein YP_001581183.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A6354 outer membrane protein, (porin) YP_001581184.1 PFAM: protein of unknown function DUF1275; KEGG: bch:Bcen2424_3009 protein of unknown function DUF1275 YP_001581185.1 KEGG: bam:Bamb_3054 hypothetical protein YP_001581186.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6356 chromate transporter YP_001581187.1 PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6357 chromate transporter YP_001581188.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence YP_001581189.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bch:Bcen2424_3013 uracil-xanthine permease YP_001581190.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes. YP_001581191.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_001581192.1 PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: bch:Bcen2424_3016 YcgR family protein YP_001581193.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space YP_001581194.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001581195.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes YP_001581196.1 makes up the distal portion of the flagellar basal body rod YP_001581197.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod YP_001581198.1 the hook connects flagellar basal body to the flagellar filament YP_001581199.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production YP_001581200.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_001581201.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_001581202.1 required for the assembly of the flagellar basal body P-ring YP_001581203.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: bam:Bamb_3072 putative anti-sigma-28 factor, FlgM YP_001581204.1 PFAM: FlgN family protein; KEGG: bch:Bcen2424_3028 FlgN family protein YP_001581205.1 PFAM: creatinase; peptidase M24; KEGG: bur:Bcep18194_A6376 peptidase M24 YP_001581206.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_A6377 transcriptional regulator, XRE family with cupin sensor domain YP_001581207.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases YP_001581208.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_3077 glutathione S-transferase, N-terminal domain YP_001581209.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: bam:Bamb_3078 NAD-dependent epimerase/dehydratase YP_001581210.1 PFAM: Lytic transglycosylase catalytic; KEGG: bch:Bcen2424_3034 lytic transglycosylase, catalytic YP_001581211.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bam:Bamb_3080 5-formyltetrahydrofolate cyclo-ligase YP_001581212.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_3036 putative transcriptional regulator YP_001581213.1 PFAM: Allophanate hydrolase subunit 1; KEGG: bch:Bcen2424_3037 hypothetical protein YP_001581214.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: bch:Bcen2424_3038 UreA amidolyase related protein YP_001581215.1 PFAM: LamB/YcsF family protein; KEGG: bch:Bcen2424_3039 LamB/YcsF family protein YP_001581216.1 PFAM: GumN family protein; KEGG: bam:Bamb_3085 GumN family protein YP_001581217.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides YP_001581218.1 KEGG: bvi:Bcep1808_3127 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001581219.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3043 binding-protein-dependent transport systems inner membrane component YP_001581220.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3129 binding-protein-dependent transport systems inner membrane component YP_001581221.1 PFAM: extracellular solute-binding protein family 5; KEGG: bch:Bcen2424_3045 extracellular solute-binding protein, family 5 YP_001581222.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6393 major facilitator superfamily (MFS_1) transporter YP_001581223.1 PFAM: High potential iron-sulfur protein; KEGG: bur:Bcep18194_A6394 iron-sulfur protein YP_001581224.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6395 FAD dependent oxidoreductase YP_001581225.1 KEGG: bch:Bcen2424_3049 AAA ATPase, central domain protein YP_001581226.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001581227.1 KEGG: bur:Bcep18194_A6396 AAA ATPase, central region YP_001581228.1 PFAM: nitroreductase; KEGG: bch:Bcen2424_3050 nitroreductase YP_001581229.1 KEGG: bur:Bcep18194_A6398 hypothetical protein YP_001581230.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bam:Bamb_3096 endonuclease/exonuclease/phosphatase YP_001581231.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bvi:Bcep1808_3138 ferredoxin--NADP(+) reductase YP_001581232.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bch:Bcen2424_3054 putative signal transduction histidine kinase YP_001581233.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_A6403 two component transcriptional regulator, LuxR family YP_001581234.1 PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_3056 amino acid permease-associated region YP_001581235.1 PFAM: protein of unknown function DUF182; KEGG: bam:Bamb_3102 protein of unknown function DUF182 YP_001581236.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bur:Bcep18194_A6407 hypothetical protein YP_001581237.1 KEGG: bur:Bcep18194_A6408 putative flagellar protein FhlB YP_001581238.1 KEGG: bch:Bcen2424_3060 hypothetical protein YP_001581239.1 KEGG: bam:Bamb_3106 hypothetical protein YP_001581240.1 PFAM: flagellar protein FliS; KEGG: bam:Bamb_3107 flagellar protein FliS YP_001581241.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bam:Bamb_3108 flagellar hook-basal body complex subunit FliE YP_001581242.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001581243.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001581244.1 binds to and inhibits the function of flagella specific ATPase FliI YP_001581245.1 KEGG: bam:Bamb_3112 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase YP_001581246.1 TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: bvi:Bcep1808_3153 flagellar export protein FliJ YP_001581247.1 PFAM: flagellar hook-length control protein; KEGG: bam:Bamb_3114 flagellar hook-length control protein YP_001581248.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bam:Bamb_3115 glucose-methanol-choline oxidoreductase YP_001581249.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_A6421 aldehyde dehydrogenase YP_001581250.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_001581251.1 KEGG: bvi:Bcep1808_3158 hypothetical protein YP_001581252.1 KEGG: bur:Bcep18194_A6424 hypothetical protein YP_001581253.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_3123 protein of unknown function DUF6, transmembrane YP_001581254.1 KEGG: bch:Bcen2424_3076 hypothetical protein YP_001581255.1 PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_3162 aldo/keto reductase YP_001581256.1 KEGG: bvi:Bcep1808_3163 hypothetical protein YP_001581257.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bvi:Bcep1808_3164 phytanoyl-CoA dioxygenase YP_001581258.1 KEGG: bch:Bcen2424_3080 hypothetical protein YP_001581259.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001581260.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_001581261.1 PFAM: diaminopimelate epimerase; KEGG: bur:Bcep18194_A6435 diaminopimelate epimerase YP_001581262.1 PFAM: protein of unknown function DUF484; KEGG: bch:Bcen2424_3086 protein of unknown function DUF484 YP_001581263.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs YP_001581264.1 SMART: PUA domain containing protein; KEGG: bch:Bcen2424_3088 PUA domain containing protein YP_001581265.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bch:Bcen2424_3089 cobalamin synthesis protein, P47K YP_001581266.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bmn:BMA10247_3431 RNA polymerase-binding protein DksA YP_001581267.1 heat shock protein involved in degradation of misfolded proteins YP_001581268.1 heat shock protein involved in degradation of misfolded proteins YP_001581269.1 KEGG: bur:Bcep18194_A6443 hypothetical protein YP_001581270.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bch:Bcen2424_3093 response regulator receiver protein YP_001581271.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_3094 periplasmic sensor signal transduction histidine kinase YP_001581272.1 KEGG: bch:Bcen2424_3095 hypothetical protein YP_001581273.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_001581274.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_3144 pyrimidine 5'-nucleotidase YP_001581275.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly YP_001581276.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: bvi:Bcep1808_3182 outer membrane autotransporter barrel domain YP_001581277.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_001581278.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: bvi:Bcep1808_3184 methionine biosynthesis protein MetW YP_001581279.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6452 major facilitator superfamily (MFS_1) transporter YP_001581280.1 PFAM: peptidase M48 Ste24p; KEGG: bch:Bcen2424_3102 peptidase M48, Ste24p YP_001581281.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bch:Bcen2424_3103 transcriptional regulator, AraC family YP_001581282.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3159 alcohol dehydrogenase, zinc-binding domain protein YP_001581283.1 KEGG: bvi:Bcep1808_3189 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_001581284.1 PFAM: protein of unknown function DUF344; KEGG: bam:Bamb_3161 protein of unknown function DUF344 YP_001581285.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001581286.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001581287.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; KEGG: bvi:Bcep1808_3193 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_001581288.1 functions in MreBCD complex in some organisms YP_001581289.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_001581290.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: bvi:Bcep1808_3196 rod shape-determining protein MreD YP_001581291.1 KEGG: bch:Bcen2424_3113 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_001581292.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: bur:Bcep18194_A6465 rod shape-determining protein RodA YP_001581293.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bch:Bcen2424_3115 Sel1 domain protein repeat-containing protein YP_001581294.1 PFAM: HpcH/HpaI aldolase; KEGG: bch:Bcen2424_3116 2-dehydro-3-deoxyglucarate aldolase YP_001581295.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bam:Bamb_3172 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_001581296.1 KEGG: bur:Bcep18194_A6469 organic radical activating enzyme-like YP_001581297.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bur:Bcep18194_A6470 ExsB family protein YP_001581298.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bur:Bcep18194_A6471 two component transcriptional regulator, fis family YP_001581299.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bch:Bcen2424_3121 periplasmic sensor signal transduction histidine kinase YP_001581300.1 KEGG: bch:Bcen2424_3122 hypothetical protein YP_001581301.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: bvi:Bcep1808_3282 sun protein YP_001581302.1 PFAM: peptidase M48 Ste24p; KEGG: bur:Bcep18194_A6475 peptidase M48, Ste24p YP_001581303.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_3125 lysine exporter protein (LysE/YggA) YP_001581304.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth YP_001581305.1 KEGG: bam:Bamb_3182 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001581306.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bch:Bcen2424_3128 DNA protecting protein DprA YP_001581307.1 PFAM: Thioredoxin domain; KEGG: bch:Bcen2424_3129 thioredoxin domain YP_001581308.1 decatenates replicating daughter chromosomes YP_001581309.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A6482 transcriptional regulator, LysR family YP_001581310.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_A6483 D-isomer specific 2-hydroxyacid dehydrogenase YP_001581311.1 PFAM: Patatin; KEGG: bch:Bcen2424_3133 patatin YP_001581312.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_A6485 phenylacetic acid degradation-related protein YP_001581313.1 KEGG: bch:Bcen2424_3135 hypothetical protein YP_001581314.1 TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3193 aldehyde dehydrogenase YP_001581315.1 TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bam:Bamb_3194 phosphonoacetate hydrolase YP_001581316.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_A6494 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein YP_001581317.1 KEGG: bur:Bcep18194_A6495 ABC spermidine/putrescine transporter, ATPase subuni; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding protein component; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001581318.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6496 ABC Fe3+ siderophore transporter, inner membrane subunit YP_001581319.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate YP_001581320.1 TIGRFAM: aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_3143 FAD dependent oxidoreductase YP_001581321.1 TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_3197 transcriptional regulator, GntR family YP_001581322.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bur:Bcep18194_A6502 L-lactate transporter YP_001581323.1 KEGG: bur:Bcep18194_A6504 hypothetical protein YP_001581324.1 involved in the first step of glutathione biosynthesis YP_001581325.1 PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: bam:Bamb_3204 AlkA domain protein YP_001581326.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bam:Bamb_3205 transcriptional regulator, AraC family YP_001581327.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_3206 glyoxalase/bleomycin resistance protein/dioxygenase YP_001581328.1 PFAM: YaeQ family protein; KEGG: bam:Bamb_3207 YaeQ family protein YP_001581329.1 KEGG: bam:Bamb_3208 hypothetical protein YP_001581330.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A6513 GCN5-related N-acetyltransferase YP_001581331.1 KEGG: bam:Bamb_3210 hypothetical protein YP_001581332.1 KEGG: bch:Bcen2424_3159 hypothetical protein YP_001581333.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001581334.1 KEGG: bch:Bcen2424_3162 hypothetical protein YP_001581335.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria YP_001581336.1 PFAM: protein of unknown function DUF37; KEGG: bch:Bcen2424_3164 protein of unknown function DUF37 YP_001581337.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: bvi:Bcep1808_3312 ribonuclease P protein component YP_001581338.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_001583134.1 PFAM: integrase family protein; KEGG: bam:Bamb_4969 phage integrase family protein YP_001583135.1 KEGG: bch:Bcen2424_5697 hypothetical protein YP_001583136.1 KEGG: bch:Bcen2424_5695 hypothetical protein YP_001583137.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bch:Bcen2424_5694 ParB-like partition proteins YP_001583138.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_4965 cobyrinic acid a,c-diamide synthase YP_001583139.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_B0006 arsenate reductase YP_001583140.1 KEGG: bch:Bcen2424_2001 protein of unknown function DUF107 YP_001583141.1 KEGG: sus:Acid_5405 hypothetical protein YP_001583142.1 PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_B0009 NADPH-dependent FMN reductase YP_001583143.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0010 periplasmic sensor hybrid histidine kinase YP_001583144.1 PFAM: response regulator receiver; KEGG: bam:Bamb_4958 response regulator receiver protein YP_001583145.1 PFAM: CheC domain protein; KEGG: bam:Bamb_4957 CheC, inhibitor of MCP methylation YP_001583146.1 KEGG: bur:Bcep18194_B0014 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein YP_001583147.1 KEGG: bch:Bcen2424_5683 alpha/beta hydrolase fold YP_001583148.1 KEGG: bch:Bcen2424_5682 hypothetical protein YP_001583149.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bam:Bamb_4953 squalene/phytoene synthase YP_001583150.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0018 amine oxidase YP_001583151.1 KEGG: bur:Bcep18194_B0019 terpene synthase/squalene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001583152.1 KEGG: bur:Bcep18194_B0020 hypothetical protein YP_001583153.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_B1828 protein of unknown function DUF879 YP_001583154.1 TIGRFAM: YD repeat protein; type VI secretion system Vgr family protein; PFAM: RHS protein; YD repeat-containing protein; Rhs element Vgr protein; KEGG: bur:Bcep18194_B1826 rhs family protein YP_001583156.1 KEGG: csa:Csal_2255 hypothetical protein YP_001583157.1 KEGG: bur:Bcep18194_B1824 hypothetical protein YP_001583158.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bur:Bcep18194_B1823 hypothetical protein YP_001583159.1 PFAM: VacJ family lipoprotein; KEGG: bam:Bamb_4949 VacJ family lipoprotein YP_001583160.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bch:Bcen2424_5676 efflux pump, RND superfamily YP_001583161.1 PFAM: toluene tolerance family protein; KEGG: bur:Bcep18194_B0023 toluene tolerance protein YP_001583162.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_3814 two component transcriptional regulator, LuxR family YP_001583163.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: bam:Bamb_4945 periplasmic sensor signal transduction histidine kinase YP_001583164.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B0028 diguanylate cyclase (GGDEF domain) YP_001583165.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_001583166.1 PFAM: protein of unknown function DUF336; KEGG: bch:Bcen2424_5668 protein of unknown function DUF336 YP_001583167.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bam:Bamb_4936 2-nitropropane dioxygenase, NPD YP_001583168.1 PFAM: CheB methylesterase; KEGG: reu:Reut_A0607 CheB methylesterase YP_001583169.1 KEGG: reu:Reut_B4915 protein-glutamate methylesterase, two-component system, chemotaxis family, response regulator CheB / chemotaxis protein methyltransferase CheR; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001583170.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3824 binding-protein-dependent transport systems inner membrane component YP_001583171.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3825 binding-protein-dependent transport systems inner membrane component YP_001583172.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_4932 extracellular solute-binding protein, family 1 YP_001583173.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: bam:Bamb_4931 beta-galactosidase YP_001583174.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5656 ABC transporter related YP_001583175.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3829 periplasmic binding protein/LacI transcriptional regulator YP_001583176.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_4928 TonB-dependent siderophore receptor YP_001583177.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4926 transcriptional regulator, LysR family YP_001583178.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001583179.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_3833 major facilitator superfamily MFS_1 YP_001583180.1 PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B0042 dihydrodipicolinate synthetase YP_001583181.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bch:Bcen2424_5642 galactose 1-dehydrogenase YP_001583182.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3836 periplasmic binding protein/LacI transcriptional regulator YP_001583183.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001583184.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose YP_001583185.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bvi:Bcep1808_3839 SMP-30/gluconolaconase/LRE domain protein YP_001583186.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA YP_001583187.1 PFAM: Aldehyde Dehydrogenase; KEGG: bvi:Bcep1808_3842 aldehyde dehydrogenase YP_001583188.1 catalyzes the conversion of ferulic acid to feruloyl-CoA YP_001583189.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rso:RSp0223 probable vanillate O-demethylase (vanillate degradation ferredoxin-like) oxidoreductase YP_001583190.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rso:RSp0222 probable vanillate O-demethylase oxygenase subunit oxidoreductase YP_001583191.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_3386 transcriptional regulator, GntR family YP_001583192.1 PFAM: regulatory protein MarR; KEGG: bvi:Bcep1808_3845 transcriptional regulator, MarR family YP_001583193.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_3846 major facilitator superfamily MFS_1 YP_001583194.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0054 outer membrane protein (porin) YP_001583195.1 PFAM: Tannase and feruloyl esterase; KEGG: bam:Bamb_4911 feruloyl esterase YP_001583196.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0060 glutamate-1-semialdehyde 2,1-aminomutase YP_001583197.1 PFAM: glycoside hydrolase family 28; SMART: Parallel beta-helix repeat; KEGG: bam:Bamb_4904 glycoside hydrolase, family 28 YP_001583198.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_3852 GCN5-related N-acetyltransferase YP_001583199.1 PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_B0066 outer membrane lipoprotein YP_001583200.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001583201.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001583202.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3732 transcriptional regulator, LysR family YP_001583203.1 PFAM: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_5618 extracellular solute-binding protein, family 3 YP_001583204.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bam:Bamb_4896 phytanoyl-CoA dioxygenase YP_001583205.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_4895 transcriptional regulator, histidine utilization repressor, GntR family YP_001583206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4890 short-chain dehydrogenase/reductase SDR YP_001583207.1 PFAM: protein of unknown function DUF480; KEGG: bch:Bcen2424_5610 protein of unknown function DUF480 YP_001583208.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive YP_001583209.1 PFAM: PRC-barrel domain protein; KEGG: bur:Bcep18194_B0088 hypothetical protein YP_001583211.1 KEGG: bur:Bcep18194_C7044 mandelate racemase/muconate lactonizing enzyme; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein YP_001583212.1 KEGG: bam:Bamb_6586 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_001583213.1 TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bur:Bcep18194_C7045 catechol 1,2-dioxygenase YP_001583214.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bch:Bcen2424_6524 Rieske (2Fe-2S) domain protein YP_001583215.1 KEGG: bur:Bcep18194_C7047 2-chlorobenzoate 1,2-dioxygenase; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit YP_001583216.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bur:Bcep18194_C7048 ferredoxin/oxidoreductase FAD/NAD(P)-binding YP_001583217.1 catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol YP_001583218.1 PFAM: Endoribonuclease L-PSP; KEGG: bvi:Bcep1808_5829 endoribonuclease L-PSP YP_001583219.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_4356 major facilitator superfamily MFS_1 YP_001583220.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2394 transcriptional regulator, LysR family YP_001583221.1 PFAM: carbon starvation protein CstA; KEGG: bam:Bamb_4884 carbon starvation protein CstA YP_001583222.1 PFAM: protein of unknown function DUF466; KEGG: bur:Bcep18194_B0098 protein of unknown function DUF466 YP_001583223.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bps:BPSS0803 hemolysin YP_001583224.1 KEGG: bch:Bcen2424_5558 hypothetical protein YP_001583225.1 PFAM: Dopa 45-dioxygenase; KEGG: bch:Bcen2424_5557 aromatic ring-cleaving dioxygenase-like protein YP_001583226.1 KEGG: bch:Bcen2424_5556 hypothetical protein YP_001583227.1 KEGG: bur:Bcep18194_B0104 hypothetical protein YP_001583228.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: bvi:Bcep1808_3717 radical SAM domain protein YP_001583229.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001583231.1 TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_5551 glycosyl transferase, family 2 YP_001583232.1 KEGG: bch:Bcen2424_5550 hypothetical protein YP_001583233.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility domain; KEGG: bch:Bcen2424_5549 NAD-dependent epimerase/dehydratase YP_001583234.1 catalyzes the hydrolysis of acylphosphate YP_001583235.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: bam:Bamb_4871 RarD protein, DMT superfamily transporter YP_001583236.1 KEGG: bur:Bcep18194_B0112 hypothetical protein YP_001583237.1 KEGG: bam:Bamb_4868 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1 YP_001583238.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0114 transcriptional regulator, XRE family with cupin sensor domain YP_001583239.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_4866 extracellular solute-binding protein, family 5 YP_001583240.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4865 binding-protein-dependent transport systems inner membrane component YP_001583241.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3704 binding-protein-dependent transport systems inner membrane component YP_001583242.1 KEGG: bam:Bamb_4863 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001583243.1 KEGG: bur:Bcep18194_B0119 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001583244.1 PFAM: outer membrane porin; KEGG: bam:Bamb_4861 outer membrane porin YP_001583245.1 SMART: Rhodanese domain protein; KEGG: bch:Bcen2424_5536 rhodanese domain protein YP_001583246.1 KEGG: bch:Bcen2424_5535 hypothetical protein YP_001583247.1 KEGG: bch:Bcen2424_5534 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_001583248.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4857 GCN5-related N-acetyltransferase YP_001583249.1 PFAM: Thioredoxin domain; KEGG: bcn:Bcen_5329 thioredoxin domain YP_001583250.1 KEGG: bch:Bcen2424_5531 hypothetical protein YP_001583251.1 PFAM: Citrate transporter; KEGG: bch:Bcen2424_5530 citrate transporter YP_001583252.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_5529 sigma54 specific transcriptional regulator, fis family YP_001583253.1 KEGG: bur:Bcep18194_B0130 hypothetical protein YP_001583254.1 KEGG: bcn:Bcen_5334 hypothetical protein YP_001583255.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bch:Bcen2424_5527 histone family protein nucleoid-structuring protein H-NS YP_001583256.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bch:Bcen2424_5525 GCN5-related N-acetyltransferase YP_001583257.1 KEGG: bch:Bcen2424_5524 hypothetical protein YP_001583258.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B0136 transcriptional regulator, IclR family YP_001583259.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B0137 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001583260.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0138 glyoxalase/bleomycin resistance protein/dioxygenase YP_001583261.1 PFAM: protein of unknown function DUF1470; KEGG: bam:Bamb_4844 protein of unknown function DUF1470 YP_001583262.1 KEGG: bam:Bamb_4843 sigma54 specific transcriptional regulator, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase YP_001583263.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate YP_001583264.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity YP_001583265.1 Catalyzes the conversion of citrate to isocitrate YP_001583266.1 TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: bch:Bcen2424_5514 AcnD-accessory protein PrpF YP_001583267.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B0153 L-carnitine dehydratase/bile acid-inducible protein F YP_001583268.1 PFAM: thioesterase superfamily protein; KEGG: bur:Bcep18194_B0156 phenylacetic acid degradation-related protein YP_001583269.1 PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B0157 methyl-accepting chemotaxis sensory transducer YP_001583270.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bch:Bcen2424_5499 N-acylglucosamine 2-epimerase YP_001583271.1 PFAM: MgtC/SapB transporter; KEGG: bvi:Bcep1808_3670 MgtC/SapB transporter YP_001583272.1 KEGG: bcn:Bcen_5363 hypothetical protein YP_001583273.1 KEGG: bch:Bcen2424_5496 hypothetical protein YP_001583274.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_3667 GCN5-related N-acetyltransferase YP_001583275.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bch:Bcen2424_5494 heavy metal translocating P-type ATPase YP_001583276.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bam:Bamb_4826 protein of unknown function DUF1214 YP_001583277.1 PFAM: protein of unknown function DUF748; KEGG: bch:Bcen2424_5492 protein of unknown function DUF748 YP_001583278.1 KEGG: bam:Bamb_4824 hypothetical protein YP_001583279.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bch:Bcen2424_5490 type I phosphodiesterase/nucleotide pyrophosphatase YP_001583280.1 KEGG: bur:Bcep18194_B0170 hypothetical protein YP_001583281.1 KEGG: bam:Bamb_4820 hypothetical protein YP_001583282.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bur:Bcep18194_B0174 cytochrome bd ubiquinol oxidase, subunit II YP_001583283.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bcn:Bcen_5383 cytochrome bd ubiquinol oxidase, subunit I YP_001583284.1 KEGG: bur:Bcep18194_B0176 hypothetical protein YP_001583285.1 KEGG: bur:Bcep18194_B0177 hypothetical protein YP_001583286.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bam:Bamb_4817 threonine aldolase YP_001583287.1 KEGG: bch:Bcen2424_5474 hypothetical protein YP_001583288.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001583289.1 PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: bch:Bcen2424_5472 beta-lactamase domain protein YP_001583290.1 PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B0183 glutathione S-transferase-like YP_001583291.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bur:Bcep18194_B0184 phosphoesterase, PA-phosphatase related YP_001583293.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0185 major facilitator superfamily (MFS_1) transporter YP_001583294.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_5468 transcriptional regulator, LysR family YP_001583295.1 PFAM: DSBA oxidoreductase; KEGG: bam:Bamb_4809 DsbA oxidoreductase YP_001583296.1 KEGG: bch:Bcen2424_5461 activator of HSP90 ATPase 1 family protein YP_001583297.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bch:Bcen2424_5461 activator of HSP90 ATPase 1 family protein YP_001583298.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_5458 GCN5-related N-acetyltransferase YP_001583299.1 KEGG: bur:Bcep18194_B0194 hypothetical protein YP_001583300.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity YP_001583301.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_4793 glutathione S-transferase, N-terminal domain YP_001583302.1 PFAM: beta-lactamase; KEGG: bch:Bcen2424_5447 beta-lactamase YP_001583303.1 PFAM: histidine triad (HIT) protein; KEGG: bch:Bcen2424_5446 histidine triad (HIT) protein YP_001583304.1 KEGG: bur:Bcep18194_B0207 hypothetical protein YP_001583305.1 PFAM: 17 kDa surface antigen; KEGG: bch:Bcen2424_5443 17 kDa surface antigen YP_001583306.1 TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bch:Bcen2424_5442 protein of unknown function DUF861, cupin_3 YP_001583307.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: bch:Bcen2424_5439 aminoglycoside/hydroxyurea antibiotic resistance kinase YP_001583308.1 KEGG: bur:Bcep18194_B0214 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001583309.1 PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_B0215 hypothetical protein YP_001583310.1 with HmuTU is involved in the import of hemin YP_001583311.1 PFAM: transport system permease; KEGG: bam:Bamb_4775 transport system permease YP_001583312.1 PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_B0219 ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein YP_001583313.1 PFAM: Haemin-degrading family protein; KEGG: bur:Bcep18194_B0220 heme degradation protein YP_001583314.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bch:Bcen2424_5431 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_001583315.1 KEGG: bch:Bcen2424_5430 hypothetical protein YP_001583316.1 KEGG: bam:Bamb_4770 hypothetical protein YP_001583317.1 KEGG: bam:Bamb_4769 hypothetical protein YP_001583318.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4768 porin, gram-negative type YP_001583319.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bam:Bamb_4767 lipoprotein, YaeC family YP_001583320.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bvi:Bcep1808_3625 succinylglutamate desuccinylase/aspartoacylase YP_001583321.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001583322.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001583323.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_4765 cationic amino acid ABC transporter, periplasmic binding protein YP_001583324.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4764 transcriptional regulator, LysR family YP_001583325.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_B0234 xanthine/uracil/vitamin C transporter YP_001583326.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bch:Bcen2424_5413 NADH:flavin oxidoreductase/NADH oxidase YP_001583327.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid YP_001583328.1 KEGG: azo:azo3630 transmembrane efflux protein YP_001583329.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4749 transcriptional regulator, LysR family YP_001583330.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001583331.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bvi:Bcep1808_3598 uncharacterized peroxidase-related enzyme YP_001583332.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_5401 alcohol dehydrogenase, zinc-binding domain protein YP_001583333.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; regulatory protein TetR; KEGG: bur:Bcep18194_B0251 transcriptional regulator, TetR family YP_001583334.1 KEGG: bch:Bcen2424_5374 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001583335.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5373 major facilitator superfamily MFS_1 YP_001583336.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_4718 transcriptional regulator, IclR family YP_001583337.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA YP_001583338.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: bur:Bcep18194_B0267 methyl-accepting chemotaxis sensory transducer YP_001583339.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_5362 succinic semialdehyde dehydrogenase YP_001583340.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: bch:Bcen2424_5361 4-aminobutyrate aminotransferase YP_001583341.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_5360 transcriptional regulator, GntR family YP_001583342.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bam:Bamb_4709 protein of unknown function DUF6, transmembrane YP_001583343.1 catalyzes the formation of selenophosphate from selenide and ATP YP_001583344.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0288 lysine exporter family protein (LysE/YggA) YP_001583345.1 PFAM: purine nucleoside permease; KEGG: bch:Bcen2424_5356 purine nucleoside permease YP_001583346.1 KEGG: bch:Bcen2424_5355 hypothetical protein YP_001583347.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4701 transcriptional regulator, LysR family YP_001583348.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bvi:Bcep1808_3581 alpha/beta hydrolase fold-3 domain protein YP_001583349.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_5352 efflux transporter, RND family, MFP subunit YP_001583350.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_5351 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001583351.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_3578 RND efflux system, outer membrane lipoprotein, NodT family YP_001583352.1 toxin of the ChpB-ChpS toxin-antitoxin system YP_001583353.1 PFAM: SpoVT/AbrB domain protein; KEGG: bvi:Bcep1808_7445 transcriptional regulator/antitoxin, MazE YP_001583354.1 PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: bpe:BP2111 hypothetical protein YP_001583355.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3262 major facilitator superfamily MFS_1 YP_001583356.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II2256 transcriptional regulator, LysR family YP_001583357.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4696 transcriptional regulator, LysR family YP_001583358.1 PFAM: transmembrane pair domain protein; KEGG: bam:Bamb_4695 transmembrane pair domain protein YP_001583359.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0304 alpha/beta hydrolase YP_001583360.1 KEGG: bam:Bamb_1060 hypothetical protein YP_001583361.1 KEGG: bam:Bamb_1059 hypothetical protein YP_001583362.1 KEGG: rso:RSc2281 probable transmembrane protein YP_001583363.1 KEGG: bch:Bcen2424_5343 hypothetical protein YP_001583364.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bam:Bamb_4692 two component, sigma54 specific, transcriptional regulator, fis family YP_001583365.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_3572 histidine kinase YP_001583366.1 PFAM: Citrate carrier protein; KEGG: bch:Bcen2424_5340 citrate carrier protein YP_001583367.1 PFAM: NLPA lipoprotein; KEGG: bam:Bamb_4689 NlpA lipoprotein YP_001583368.1 KEGG: bur:Bcep18194_B0310 flavin-dependent oxidoreductase YP_001583369.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0311 ABC metal ion transporter, ATPase subunit YP_001583370.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0312 ABC metal ion transporter, inner membrane subunit YP_001583371.1 KEGG: bam:Bamb_4685 hypothetical protein YP_001583372.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bch:Bcen2424_5334 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001583373.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_4683 transcriptional regulator, XRE family YP_001583374.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0327 D-galactonate transporter YP_001583375.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4679 aldehyde dehydrogenase YP_001583376.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: reh:H16_B1957 transcriptional regulator, MocR family YP_001583377.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reh:H16_B1958 threonine efflux protein YP_001583378.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: reh:H16_B1959 hypothetical protein YP_001583379.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6111 transcriptional regulator, LysR family YP_001583381.1 PFAM: NmrA family protein; KEGG: bam:Bamb_6112 NmrA family protein YP_001583383.1 KEGG: bch:Bcen2424_5318 hypothetical protein YP_001583384.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate YP_001583385.1 KEGG: bam:Bamb_4675 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_001583386.1 KEGG: bch:Bcen2424_5313 hypothetical protein YP_001583387.1 PFAM: RbsD or FucU transport; KEGG: bch:Bcen2424_5312 RbsD or FucU transport YP_001583388.1 PFAM: DoxX family protein; KEGG: bur:Bcep18194_B0336 DoxX family membrane protein YP_001583389.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_3557 major facilitator superfamily MFS_1 YP_001583390.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_4669 extracellular ligand-binding receptor YP_001583391.1 KEGG: bch:Bcen2424_5308 hypothetical protein YP_001583392.1 PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bam:Bamb_4668 transcriptional regulator, AraC family YP_001583393.1 KEGG: bch:Bcen2424_5306 hypothetical protein YP_001583394.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: bam:Bamb_4666 4-hydroxyphenylpyruvate dioxygenase YP_001583395.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001583396.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001583397.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5302 major facilitator superfamily MFS_1 YP_001583398.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate YP_001583399.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bvi:Bcep1808_3548 ABC transporter, periplasmic binding protein, ThiB subfamily YP_001583400.1 KEGG: bvi:Bcep1808_3547 ABC transporter related; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001583401.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0350 ABC transporter, inner membrane subunit YP_001583402.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3545 binding-protein-dependent transport systems inner membrane component YP_001583403.1 TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bam:Bamb_4657 phosphonoacetate hydrolase YP_001583404.1 TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0353 aldehyde dehydrogenase YP_001583405.1 KEGG: bch:Bcen2424_5294 HD phosphohydrolase-like protein YP_001583406.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4654 drug resistance transporter, EmrB/QacA subfamily YP_001583407.1 KEGG: bam:Bamb_4653 hypothetical protein YP_001583408.1 PFAM: phosphate transporter; KEGG: bch:Bcen2424_5291 phosphate transporter YP_001583409.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0361 transcriptional regulator, LysR family YP_001583410.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_001583411.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_4645 major facilitator superfamily MFS_1 YP_001583412.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bur:Bcep18194_B0366 agmatinase YP_001583413.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0367 transcriptional regulator, LysR family YP_001583414.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bvi:Bcep1808_3534 transcriptional regulator, AsnC family YP_001583415.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_4641 lysine exporter protein (LysE/YggA) YP_001583416.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bch:Bcen2424_3472 transposase IS116/IS110/IS902 family protein YP_001583417.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bam:Bamb_4640 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001583418.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bam:Bamb_4639 peptidase S10, serine carboxypeptidase YP_001583419.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001583420.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B0373 protein of unknown function DUF6, transmembrane YP_001583421.1 KEGG: bam:Bamb_4636 hypothetical protein YP_001583422.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bam:Bamb_4635 transcriptional regulator, DeoR family YP_001583423.1 KEGG: bch:Bcen2424_5274 phospholipase D/transphosphatidylase YP_001583424.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_5273 transcriptional regulator, TetR family YP_001583425.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_4632 FAD dependent oxidoreductase YP_001583426.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0379 amino acid transporter YP_001583427.1 PFAM: Aldehyde Dehydrogenase; KEGG: bvi:Bcep1808_3523 aldehyde dehydrogenase YP_001583428.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bam:Bamb_4629 MscS mechanosensitive ion channel YP_001583429.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5266 major facilitator superfamily MFS_1 YP_001583430.1 KEGG: bch:Bcen2424_5265 hypothetical protein YP_001583431.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bch:Bcen2424_5259 peptidoglycan glycosyltransferase YP_001583432.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_4617 transcriptional regulator, GntR family YP_001583433.1 PFAM: Negative transcriptional regulator; KEGG: bur:Bcep18194_B0396 negative transcriptional regulator YP_001583434.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bch:Bcen2424_5256 redoxin domain protein YP_001583435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0398 two component transcriptional regulator, winged helix family YP_001583436.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B0399 periplasmic sensor signal transduction histidine kinase YP_001583437.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_4612 metallophosphoesterase YP_001583438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4611 GCN5-related N-acetyltransferase YP_001583439.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0404 outer membrane protein (porin) YP_001583440.1 KEGG: bam:Bamb_4607 hypothetical protein YP_001583441.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B0422 transcriptional regulator, TetR family YP_001583442.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_4588 acyl-CoA dehydrogenase domain protein YP_001583443.1 PFAM: carboxyl transferase; KEGG: bam:Bamb_4587 propionyl-CoA carboxylase YP_001583444.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001583445.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bch:Bcen2424_5237 carbamoyl-phosphate synthase L chain, ATP-binding YP_001583446.1 KEGG: bch:Bcen2424_5233 hypothetical protein YP_001583447.1 PFAM: EAL domain protein; KEGG: bur:Bcep18194_B0433 diguanylate phosphodiesterase (EAL domain) YP_001583448.1 KEGG: bcn:Bcen_3137 hypothetical protein YP_001583449.1 KEGG: bur:Bcep18194_B0436 hypothetical protein YP_001583450.1 KEGG: bvi:Bcep1808_3485 hypothetical protein YP_001583451.1 KEGG: bam:Bamb_4577 hypothetical protein YP_001583452.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_4576 OmpA/MotB domain protein YP_001583453.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bch:Bcen2424_5223 haemagluttinin domain protein YP_001583454.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001583455.1 KEGG: bvi:Bcep1808_3478 hypothetical protein YP_001583456.1 KEGG: bur:Bcep18194_B0444 hypothetical protein YP_001583457.1 PFAM: NADPH-dependent FMN reductase; KEGG: bch:Bcen2424_5177 NADPH-dependent FMN reductase YP_001583458.1 KEGG: bur:Bcep18194_B0452 hypothetical protein YP_001583459.1 KEGG: bch:Bcen2424_5173 membrane protein-like protein YP_001583461.1 KEGG: bch:Bcen2424_5172 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001583462.1 TIGRFAM: choline ABC transporter, permease; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_5171 binding-protein-dependent transport systems inner membrane component YP_001583463.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0457 transcriptional regulator, AraC family YP_001583464.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_4564 substrate-binding region of ABC-type glycine betaine transport system YP_001583465.1 KEGG: bam:Bamb_4563 glycosyl hydrolase YP_001583466.1 KEGG: bam:Bamb_4562 thiamineS protein YP_001583467.1 KEGG: bam:Bamb_4561 hypothetical protein YP_001583468.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bam:Bamb_4559 aspartyl/asparaginyl beta-hydroxylase YP_001583469.1 KEGG: bam:Bamb_4558 hypothetical protein YP_001583470.1 KEGG: bam:Bamb_4557 hypothetical protein YP_001583471.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bur:Bcep18194_B0473 NAD-dependent epimerase/dehydratase YP_001583472.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_B0474 hydroxypyruvate isomerase YP_001583473.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter YP_001583474.1 PFAM: class II aldolase/adducin family protein; KEGG: bch:Bcen2424_5157 class II aldolase/adducin family protein YP_001583475.1 PFAM: type III effector Hrp-dependent outers; KEGG: bur:Bcep18194_B0477 type III effector Hrp-dependent outer proteins YP_001583476.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bam:Bamb_4550 3-hydroxyisobutyrate dehydrogenase YP_001583477.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_B0479 transcriptional regulator, GntR family YP_001583478.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bch:Bcen2424_5153 transcriptional regulator, AraC family YP_001583479.1 KEGG: bch:Bcen2424_5152 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001583480.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_3459 sarcosine oxidase, beta subunit family YP_001583481.1 PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bch:Bcen2424_5150 sarcosine oxidase, delta subunit, heterotetrameric YP_001583482.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bch:Bcen2424_5149 sarcosine oxidase, alpha subunit family YP_001583483.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: bur:Bcep18194_B0489 sarcosine oxidase, gamma subunit YP_001583484.1 PFAM: dihydroneopterin aldolase; KEGG: bch:Bcen2424_5147 dihydroneopterin aldolase YP_001583485.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_4539 lytic transglycosylase, catalytic YP_001583486.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0496 ABC proline/glycine betaine transporter, inner membrane subunit YP_001583487.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4537 ABC transporter related YP_001583488.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4536 binding-protein-dependent transport systems inner membrane component YP_001583489.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0499 ABC glycine betaine/choline transporter, periplasmic ligand binding protein YP_001583490.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bch:Bcen2424_5140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001583491.1 PFAM: OsmC family protein; KEGG: bte:BTH_II1006 OsmC/Ohr family protein YP_001583492.1 TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; Male sterility domain; KEGG: bam:Bamb_5388 amino acid adenylation domain YP_001583493.1 KEGG: bam:Bamb_4531 hypothetical protein YP_001583494.1 KEGG: bch:Bcen2424_5117 hypothetical protein YP_001583495.1 KEGG: bam:Bamb_4529 hypothetical protein YP_001583496.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_6247 two component transcriptional regulator, winged helix family YP_001583497.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: bam:Bamb_6238 periplasmic sensor signal transduction histidine kinase YP_001583498.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein YP_001583499.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bch:Bcen2424_3472 transposase IS116/IS110/IS902 family protein YP_001583500.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_6245 YadA C-terminal domain protein YP_001583501.1 PFAM: OmpA/MotB domain protein; SmpA/OmlA domain protein; KEGG: bam:Bamb_6244 OmpA/MotB domain protein YP_001583502.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4604 regulatory protein, LysR:LysR, substrate-binding YP_001583503.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001583504.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2085 transcriptional regulator, LysR family YP_001583505.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_3410 short-chain dehydrogenase/reductase SDR YP_001583506.1 PFAM: esterase; KEGG: bam:Bamb_4526 esterase YP_001583507.1 PFAM: DGPFAETKE family protein; KEGG: bvi:Bcep1808_3442 DGPFAETKE family protein YP_001583508.1 KEGG: bch:Bcen2424_5110 hypothetical protein YP_001583509.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0539 major facilitator superfamily (MFS_1) transporter YP_001583510.1 PFAM: ABC-2 type transporter; KEGG: bam:Bamb_4521 ABC-2 type transporter YP_001583511.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_5107 ABC transporter related YP_001583512.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine YP_001583513.1 catalyzes the formation of betaine from betaine aldehyde YP_001583514.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes YP_001583515.1 TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_5090 alcohol dehydrogenase GroES domain protein YP_001583516.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4195 probable transcriptional regulator YP_001583517.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: bam:Bamb_1102 protein of unknown function DUF6, transmembrane YP_001583518.1 KEGG: bch:Bcen2424_5089 hypothetical protein YP_001583519.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B0568 transcriptional regulator, GntR family with aminotransferase activity YP_001583520.1 PFAM: coagulation factor 5/8 type domain protein; WD40 domain protein beta Propeller; KEGG: bch:Bcen2424_5087 coagulation factor 5/8 type domain protein YP_001583521.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B0570 transcriptional regulator, AraC family YP_001583522.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001583523.1 PFAM: peptidase M19 renal dipeptidase; KEGG: bvi:Bcep1808_3422 membrane dipeptidase YP_001583524.1 PFAM: 4-vinyl reductase 4VR; KEGG: bch:Bcen2424_5083 4-vinyl reductase, 4VR YP_001583525.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bvi:Bcep1808_3420 NADH:flavin oxidoreductase/NADH oxidase YP_001583526.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bch:Bcen2424_5081 protein of unknown function DUF224, cysteine-rich region domain protein YP_001583527.1 PFAM: Electron transfer flavoprotein alpha subunit; KEGG: bch:Bcen2424_5080 electron transfer flavoprotein, alpha subunit YP_001583528.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bam:Bamb_4491 electron transfer flavoprotein beta-subunit YP_001583529.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_4490 Rieske (2Fe-2S) domain protein YP_001583530.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bvi:Bcep1808_3415 oxidoreductase FAD-binding domain protein YP_001583531.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001583532.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_4488 substrate-binding region of ABC-type glycine betaine transport system YP_001583533.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0581 amino acid transporter YP_001583534.1 PFAM: regulatory protein LacI; KEGG: atc:AGR_L_273 fructose transport system repressor FruR YP_001583535.1 KEGG: rle:pRL120191 substrate binding component of ABC transporter YP_001583536.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20485 sugar ABC transporter ATP-binding protein YP_001583537.1 PFAM: inner-membrane translocator; KEGG: rle:pRL120193 permease component of ABC transporter YP_001583538.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20487 sugar ABC transporter permease YP_001583539.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll3595 similar to D-tagatose 3-epimerase-related protein YP_001583540.1 KEGG: csa:Csal_0642 hypothetical protein YP_001583541.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001583542.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2664 ABC transporter ATP-binding protein YP_001583543.1 PFAM: protein of unknown function DUF990; KEGG: gtn:GTNG_0485 daunorubicin resistance transmembrane protein YP_001583545.1 TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0586 transcriptional regulator, LysR family YP_001583546.1 TIGRFAM: choline-sulfatase; PFAM: sulfatase; KEGG: bam:Bamb_4484 sulfatase YP_001583547.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0588 ABC proline/glycine betaine transporter, periplasmic ligand binding protein YP_001583548.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_3408 porin, gram-negative type YP_001583549.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5069 major facilitator superfamily MFS_1 YP_001583550.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_4480 TonB-dependent siderophore receptor YP_001583551.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bam:Bamb_4479 2OG-Fe(II) oxygenase YP_001583552.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bam:Bamb_4478 PepSY-associated TM helix domain protein YP_001583553.1 PFAM: protein of unknown function DUF74; KEGG: bvi:Bcep1808_3406 protein of unknown function DUF74 YP_001583554.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bch:Bcen2424_5064 transcriptional regulator, AraC family YP_001583555.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_4473 transcriptional regulator, AraC family YP_001583556.1 PFAM: methylamine dehydrogenase heavy subunit; KEGG: bur:Bcep18194_B0601 amine dehydrogenase YP_001583557.1 PFAM: methylamine utilisation MauE; KEGG: bch:Bcen2424_5061 hypothetical protein YP_001583558.1 TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_4470 methylamine dehydrogenase accessory protein MauD YP_001583559.1 PFAM: methylamine dehydrogenase light chain domain protein; KEGG: bam:Bamb_4469 amine dehydrogenase YP_001583560.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B0605 cytochrome c, class I YP_001583561.1 KEGG: bch:Bcen2424_5057 cytochrome c, class I YP_001583562.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B0607 aldehyde dehydrogenase (NAD+) YP_001583563.1 KEGG: bte:BTH_II1532 outer membrane porin OpcP YP_001583564.1 TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0611 ABC proline/glycine betaine transporter, periplasmic ligand binding protein YP_001583565.1 PFAM: protein of unknown function DUF849; KEGG: bch:Bcen2424_5051 protein of unknown function DUF849 YP_001583566.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001583567.1 KEGG: bam:Bamb_4457 thioesterase-like protein YP_001583568.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bam:Bamb_4456 alpha/beta hydrolase fold-3 domain protein YP_001583569.1 KEGG: bvi:Bcep1808_3388 hypothetical protein YP_001583570.1 KEGG: bur:Bcep18194_B0619 hypothetical protein YP_001583571.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4451 short-chain dehydrogenase/reductase SDR YP_001583572.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_5042 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001583573.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_B0622 mandelate racemase/muconate lactonizing enzyme YP_001583574.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0623 short chain dehydrogenase YP_001583575.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4447 ABC transporter related YP_001583576.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_3381 inner-membrane translocator YP_001583577.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3380 periplasmic binding protein/LacI transcriptional regulator YP_001583578.1 PFAM: amidohydrolase 2; KEGG: bam:Bamb_4444 amidohydrolase 2 YP_001583579.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_5035 regulatory protein GntR, HTH YP_001583580.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0629 FAD dependent oxidoreductase YP_001583581.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B0632 hydroxydechloroatrazine ethylaminohydrolase YP_001583582.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B0633 xanthine/uracil transporter YP_001583583.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_B0634 cobalamin synthesis protein/P47K YP_001583584.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: bur:Bcep18194_B0635 phenylacrylic acid decarboxylase YP_001583585.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bur:Bcep18194_B0636 carboxylyase-related protein YP_001583586.1 PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B0637 amidohydrolase 2 YP_001583587.1 PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B0638 amidohydrolase 2 YP_001583588.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0639 transcriptional regulator, LysR family YP_001583589.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0640 transcriptional regulator, LysR family YP_001583590.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B0641 iron sulfer protein YP_001583591.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B0642 aldehyde oxidase YP_001583592.1 KEGG: bur:Bcep18194_B0643 hypothetical protein YP_001583593.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bur:Bcep18194_B0644 diguanylate cyclase (GGDEF domain) YP_001583594.1 PFAM: OmpA/MotB domain protein; KEGG: bch:Bcen2424_5026 OmpA/MotB domain protein YP_001583595.1 KEGG: bch:Bcen2424_3749 hypothetical protein YP_001583596.1 KEGG: bch:Bcen2424_3750 hypothetical protein YP_001583597.1 PFAM: aminotransferase class V; KEGG: bvi:Bcep1808_3397 aminotransferase, class V YP_001583598.1 KEGG: bam:Bamb_4433 hypothetical protein YP_001583599.1 PFAM: Extracellular ligand-binding receptor; KEGG: bch:Bcen2424_5019 extracellular ligand-binding receptor YP_001583600.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_3372 inner-membrane translocator YP_001583601.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine YP_001583602.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine YP_001583603.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_5015 ABC transporter related YP_001583604.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4427 transcriptional regulator, LysR family YP_001583605.1 KEGG: bch:Bcen2424_5013 hypothetical protein YP_001583606.1 KEGG: bch:Bcen2424_5012 hypothetical protein YP_001583607.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_5011 protein of unknown function DUF6, transmembrane YP_001583608.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_5010 glyoxalase/bleomycin resistance protein/dioxygenase YP_001583609.1 KEGG: bam:Bamb_4422 hypothetical protein YP_001583610.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bch:Bcen2424_5008 transcriptional regulator, AraC family YP_001583611.1 PFAM: UbiA prenyltransferase; KEGG: azo:azo0348 4-hydroxybenzoate octaprenyltransferase YP_001583613.1 KEGG: pin:Ping_0451 small multidrug resistance protein YP_001583614.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: bvi:Bcep1808_3359 protein kinase YP_001583615.1 KEGG: bam:Bamb_4405 hypothetical protein YP_001583616.1 PFAM: ferredoxin; KEGG: bvi:Bcep1808_3353 ferredoxin YP_001583617.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0698 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_001583618.1 KEGG: bch:Bcen2424_4978 hypothetical protein YP_001583619.1 KEGG: bch:Bcen2424_4977 hypothetical protein YP_001583620.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bam:Bamb_4396 xanthine/uracil/vitamin C permease YP_001583621.1 KEGG: bch:Bcen2424_4973 hypothetical protein YP_001583622.1 KEGG: bam:Bamb_4394 hypothetical protein YP_001583623.1 KEGG: bch:Bcen2424_4971 hypothetical protein YP_001583624.1 KEGG: bch:Bcen2424_4970 metal-dependent hydrolase YP_001583625.1 PFAM: alpha/beta hydrolase fold; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0709 short chain dehydrogenase YP_001583626.1 KEGG: bch:Bcen2424_4968 hypothetical protein YP_001583627.1 KEGG: bra:BRADO1356 hypothetical protein YP_001583628.1 PFAM: Abi family protein; KEGG: lpp:plpp0049 hypothetical protein YP_001583629.1 PFAM: band 7 protein; KEGG: bur:Bcep18194_B0711 membrane protease YP_001583630.1 PFAM: protein of unknown function DUF107; KEGG: bam:Bamb_4387 protein of unknown function DUF107 YP_001583631.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0713 transcriptional regulator, AraC family YP_001583632.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bch:Bcen2424_4963 acyl-CoA dehydrogenase domain protein YP_001583633.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bch:Bcen2424_4962 AMP-dependent synthetase and ligase YP_001583634.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4961 methylmalonate-semialdehyde dehydrogenase YP_001583635.1 KEGG: bch:Bcen2424_4960 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001583636.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001583637.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bam:Bamb_4380 enoyl-CoA hydratase/isomerase YP_001583638.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4957 transcriptional regulator, LysR family YP_001583639.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4956 major facilitator superfamily MFS_1 YP_001583640.1 KEGG: bam:Bamb_4377 metal-dependent phosphohydrolase YP_001583641.1 KEGG: bur:Bcep18194_B0729 transcriptional regulator, XRE family YP_001583642.1 KEGG: bam:Bamb_4374 hypothetical protein YP_001583643.1 PFAM: ribonuclease T2; KEGG: bur:Bcep18194_B0733 ribonuclease T2 YP_001583644.1 PFAM: isochorismatase hydrolase; KEGG: bch:Bcen2424_4947 isochorismatase hydrolase YP_001583645.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_B5154 helix-turn-helix, AraC type YP_001583646.1 PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_B5155 flavin-containing monooxygenase FMO:FAD dependent oxidoreductase YP_001583647.1 PFAM: alpha/beta hydrolase fold; peptidase S15; KEGG: rme:Rmet_5227 alpha/beta hydrolase fold YP_001583648.1 PFAM: Saccharopine dehydrogenase; KEGG: pfl:PFL_3454 hypothetical protein YP_001583649.1 PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bvi:Bcep1808_0858 transcriptional regulator, DeoR family YP_001583650.1 PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4044 nucleoside diphosphate pyrophosphatase YP_001583651.1 KEGG: bur:Bcep18194_A4045 hypothetical protein YP_001583652.1 catalyzes the formation of glutamate from glutamine YP_001583653.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_4939 two component transcriptional regulator, winged helix family YP_001583654.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_4368 periplasmic sensor signal transduction histidine kinase YP_001583655.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsq:Rsph17025_0241 TRAP dicarboxylate transporter, DctM subunit YP_001583656.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bra:BRADO5526 TRAP-type C4-dicarboxylate transport system, small permease component (DctQ subunit) YP_001583657.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gur:Gura_2784 TRAP dicarboxylate transporter, DctP subunit YP_001583658.1 KEGG: mms:mma_0468 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001583659.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mag:amb0897 response regulator YP_001583660.1 PFAM: Patatin; surface antigen variable number repeat protein; KEGG: bch:Bcen2424_4937 patatin YP_001583661.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bam:Bamb_4366 cell shape determining protein, MreB/Mrl family YP_001583662.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: bch:Bcen2424_4932 amylo-alpha-1,6-glucosidase YP_001583663.1 KEGG: bch:Bcen2424_4931 hypothetical protein YP_001583664.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4361 transcriptional regulator, LysR family YP_001583665.1 PFAM: penicillin-binding protein transpeptidase; beta-lactamase; KEGG: bvi:Bcep1808_5453 beta-lactamase YP_001583666.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_4357 periplasmic sensor signal transduction histidine kinase YP_001583667.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_4924 two component transcriptional regulator, winged helix family YP_001583668.1 PFAM: conserved hypothetical protein; KEGG: bam:Bamb_4355 conserved hypothetical protein 156 YP_001583669.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_B0770 transcriptional regulator, RpiR family YP_001583670.1 KEGG: bur:Bcep18194_B0773 PEP phosphonomutase YP_001583671.1 KEGG: bvi:Bcep1808_5446 hypothetical protein YP_001583672.1 KEGG: bch:Bcen2424_4916 cytochrome P450-like protein YP_001583673.1 KEGG: bur:Bcep18194_B0776 hypothetical protein YP_001583674.1 PFAM: Rhodanese domain protein; KEGG: bam:Bamb_4349 rhodanese domain protein YP_001583675.1 upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism YP_001583676.1 KEGG: bam:Bamb_4346 hypothetical protein YP_001583677.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bam:Bamb_4345 lysine decarboxylase YP_001583678.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0780 amino acid transporter YP_001583679.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bch:Bcen2424_4911 peptidase M20 YP_001583680.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bur:Bcep18194_B0783 malate/L-lactate dehydrogenase YP_001583681.1 PFAM: TfoX domain protein; KEGG: bur:Bcep18194_B0784 TfoX-like protein YP_001583682.1 PFAM: NnrUfamily protein; KEGG: bch:Bcen2424_4908 NnrU family protein YP_001583683.1 PFAM: protein of unknown function DUF81; KEGG: bam:Bamb_4338 protein of unknown function DUF81 YP_001583685.1 PFAM: Hemolysin-type calcium-binding region; KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein YP_001583686.1 PFAM: outer membrane efflux protein; KEGG: rso:RS05071 outer membrane efflux transmembrane protein YP_001583687.1 KEGG: rso:RS05072 composite ATP-binding transmembrane ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001583688.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rso:RS05073 hemolysin-type secretion transmembrane protein YP_001583689.1 PFAM: protein of unknown function DUF1130; KEGG: bur:Bcep18194_B0793 protein of unknown function DUF1130 YP_001583690.1 KEGG: bam:Bamb_4336 hypothetical protein YP_001583691.1 SMART: Parallel beta-helix repeat; KEGG: bur:Bcep18194_B0792 hypothetical protein YP_001583692.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_C7667 two component transcriptional regulator, LuxR family YP_001583693.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_3360 integral membrane sensor hybrid histidine kinase YP_001583694.1 KEGG: reu:Reut_B4331 hypothetical protein YP_001583695.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_4903 FAD dependent oxidoreductase YP_001583696.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0803 transcriptional regulator, XRE family YP_001583697.1 PFAM: glutamine synthetase catalytic region; KEGG: bvi:Bcep1808_5375 glutamine synthetase, catalytic region YP_001583698.1 KEGG: bam:Bamb_4268 hypothetical protein YP_001583699.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_4265 transcriptional regulator, GntR family YP_001583700.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_4884 protein of unknown function DUF6, transmembrane YP_001583701.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding YP_001583702.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase YP_001583703.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_4881 GCN5-related N-acetyltransferase YP_001583704.1 KEGG: bch:Bcen2424_4880 hypothetical protein YP_001583705.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bch:Bcen2424_4879 haloacid dehalogenase domain protein hydrolase YP_001583706.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4241 GCN5-related N-acetyltransferase YP_001583707.1 PFAM: protein of unknown function DUF1653; KEGG: bam:Bamb_4240 hypothetical protein YP_001583708.1 PFAM: protein of unknown function DUF1006; KEGG: bam:Bamb_4239 protein of unknown function DUF1006 YP_001583709.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4867 major facilitator superfamily MFS_1 YP_001583710.1 PFAM: glycoside hydrolase family 37; KEGG: bam:Bamb_4237 alpha,alpha-trehalase YP_001583712.1 PFAM: natural resistance-associated macrophage protein; KEGG: bch:Bcen2424_4859 natural resistance-associated macrophage protein YP_001583713.1 PFAM: regulatory protein LuxR; KEGG: bch:Bcen2424_4858 transcriptional regulator, LuxR family YP_001583714.1 PFAM: regulatory protein LuxR; KEGG: bam:Bamb_4231 transcriptional regulator, LuxR family YP_001583715.1 PFAM: type III secretion FHIPEP protein; KEGG: bch:Bcen2424_4856 type III secretion FHIPEP protein YP_001583716.1 TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: bam:Bamb_4229 type III secretion protein, HrpO family YP_001583717.1 TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bvi:Bcep1808_5342 type III secretion outer membrane pore, YscC/HrcC family YP_001583718.1 KEGG: ade:Adeh_0244 LigA YP_001583719.1 KEGG: bam:Bamb_4226 hypothetical protein YP_001583720.1 TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: bam:Bamb_4225 type III secretion apparatus lipoprotein, YscJ/HrcJ family YP_001583721.1 KEGG: bam:Bamb_4224 hypothetical protein YP_001583722.1 TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; KEGG: bam:Bamb_4223 type III secretion apparatus protein, HrpE/YscL family YP_001583723.1 KEGG: bam:Bamb_4222 type III secretion apparatus H+-transporting two-sector ATPase; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_001583724.1 KEGG: bam:Bamb_4221 hypothetical protein YP_001583725.1 TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: bch:Bcen2424_4845 type III secretion protein SpaR/YscT/HrcT YP_001583726.1 PFAM: type III secretion exporter; KEGG: bch:Bcen2424_4844 type III secretion exporter YP_001583727.1 KEGG: bch:Bcen2424_4843 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001583728.1 PFAM: Peptidoglycan-binding LysM; KEGG: bvi:Bcep1808_5330 hypothetical protein YP_001583729.1 PFAM: Lytic transglycosylase catalytic; KEGG: bam:Bamb_4216 lytic transglycosylase, catalytic YP_001583730.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response YP_001583731.1 TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bch:Bcen2424_4839 type III secretion system apparatus protein YscQ/HrcQ YP_001583732.1 PFAM: transcriptional regulator domain protein; KEGG: bam:Bamb_4213 response regulator receiver protein YP_001583733.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_4211 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001583734.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_4210 (2Fe-2S)-binding domain protein YP_001583735.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bch:Bcen2424_4835 transcriptional regulator, AraC family YP_001583736.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001583737.1 PFAM: short chain fatty acid transporter; KEGG: reh:H16_B1586 short chain fatty acid transporter YP_001583738.1 Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA YP_001583739.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_3940 short-chain dehydrogenase/reductase SDR YP_001583740.1 KEGG: reh:H16_B0964 hypothetical protein YP_001583741.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bch:Bcen2424_1669 transcriptional regulator, IclR family YP_001583742.1 KEGG: bur:Bcep18194_B0865 glycosyltransferase probably involved in cell wall biogenesis-like YP_001583743.1 KEGG: bur:Bcep18194_B0866 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001583744.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_B0867 UDP-glucose 4-epimerase YP_001583745.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bur:Bcep18194_B0868 NAD-dependent epimerase/dehydratase YP_001583747.1 KEGG: bur:Bcep18194_B0870 hypothetical protein YP_001583748.1 KEGG: bch:Bcen2424_4832 hypothetical protein YP_001583749.1 KEGG: bch:Bcen2424_4831 hypothetical protein YP_001583750.1 KEGG: bur:Bcep18194_B0874 hypothetical protein YP_001583751.1 KEGG: bch:Bcen2424_4829 hypothetical protein YP_001583752.1 KEGG: bur:Bcep18194_B0876 hypothetical protein YP_001583753.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0877 sigma54 specific transcriptional regulator, fis family YP_001583754.1 KEGG: bvi:Bcep1808_5313 hypothetical protein YP_001583755.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B0880 two component transcriptional regulator, LuxR family YP_001583756.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bam:Bamb_4204 methyl-accepting chemotaxis sensory transducer YP_001583757.1 KEGG: bam:Bamb_4203 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001583758.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_4202 transcriptional regulator, AraC family YP_001583759.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_4201 periplasmic binding protein/LacI transcriptional regulator YP_001583760.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4200 ABC transporter related YP_001583761.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_4818 inner-membrane translocator YP_001583762.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_4817 alcohol dehydrogenase GroES domain protein YP_001583763.1 PFAM: carbohydrate kinase FGGY; KEGG: bam:Bamb_4197 xylulokinase YP_001583764.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0889 short chain dehydrogenase YP_001583765.1 KEGG: bcn:Bcen_3553 hypothetical protein YP_001583766.1 KEGG: bvi:Bcep1808_5308 uncharacterized MobA-related protein YP_001583767.1 PFAM: PilT protein domain protein; KEGG: bam:Bamb_4194 PilT protein domain protein YP_001583768.1 KEGG: bam:Bamb_4193 hypothetical protein YP_001583769.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bch:Bcen2424_4810 2OG-Fe(II) oxygenase YP_001583770.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bch:Bcen2424_4809 Sel1 domain protein repeat-containing protein YP_001583771.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bch:Bcen2424_4808 TonB-dependent siderophore receptor YP_001583772.1 PFAM: Arc domain protein DNA binding domain protein; KEGG: bur:Bcep18194_B0895 plasmid stability protein-like YP_001583773.1 PFAM: PilT protein domain protein; KEGG: bur:Bcep18194_B0896 PilT protein-like YP_001583774.1 catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate YP_001583775.1 PFAM: Entericidin EcnAB; KEGG: bur:Bcep18194_B0898 entericidin EcnAB YP_001583776.1 KEGG: bam:Bamb_4185 hypothetical protein YP_001583777.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: bur:Bcep18194_B0900 protein of unknown function DUF6, transmembrane YP_001583778.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bch:Bcen2424_4803 transcriptional regulator, AraC family YP_001583779.1 KEGG: bur:Bcep18194_B0902 hypothetical protein YP_001583780.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001583781.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_5301 short-chain dehydrogenase/reductase SDR YP_001583782.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bch:Bcen2424_6922 histone family protein nucleoid-structuring protein H-NS YP_001583783.1 KEGG: bch:Bcen2424_4794 hypothetical protein YP_001583784.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4177 major facilitator superfamily MFS_1 YP_001583785.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0919 transcriptional regulator, LysR family YP_001583786.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4175 transcriptional regulator, LysR family YP_001583787.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: bam:Bamb_4174 NAD-dependent epimerase/dehydratase YP_001583788.1 KEGG: bur:Bcep18194_B0924 hypothetical protein YP_001583789.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0925 major facilitator superfamily (MFS_1) transporter YP_001583790.1 KEGG: bam:Bamb_4171 hypothetical protein YP_001583791.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4170 transcriptional regulator, LysR family YP_001583792.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0928 short-chain dehydrogenase/reductase SDR YP_001583793.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: bur:Bcep18194_B0929 protein of unknown function, zinc binding 2 YP_001583794.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B0930 transcriptional regulator, LuxR family YP_001583795.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4781 betaine-aldehyde dehydrogenase YP_001583796.1 PFAM: aminotransferase class-III; KEGG: bch:Bcen2424_4780 aminotransferase class-III YP_001583797.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0935 amino acid transporter YP_001583798.1 KEGG: bur:Bcep18194_B0936 hypothetical protein YP_001583799.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_4160 transcriptional regulator, AraC family YP_001583800.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4159 porin, gram-negative type YP_001583801.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bbr:BB1971 membrane protein YP_001583802.1 KEGG: bam:Bamb_4152 lysine exporter protein (LysE/YggA) YP_001583803.1 KEGG: pst:PSPTO_4011 hypothetical protein YP_001583804.1 PFAM: HNH endonuclease; KEGG: bch:Bcen2424_6796 hypothetical protein YP_001583805.1 KEGG: bvi:Bcep1808_1147 hypothetical protein YP_001583807.1 PFAM: HNH endonuclease; NUMOD4 domain protein; KEGG: lga:LGAS_0666 homing nuclease of HNH family with NUMOD4 and IENR domains YP_001583809.1 KEGG: bpd:BURPS668_A2370 GP53 YP_001583810.1 KEGG: bvi:Bcep1808_2149 hypothetical protein YP_001583812.1 KEGG: bvi:Bcep1808_4508 hypothetical protein YP_001583813.1 KEGG: bvi:Bcep1808_4509 hypothetical protein YP_001583814.1 KEGG: bpd:BURPS668_A2372 GP38 YP_001583815.1 KEGG: bpd:BURPS668_A2370 GP53 YP_001583816.1 KEGG: bpe:BP0513 phage-related hypothetical protein YP_001583823.1 KEGG: bps:BPSL1149 hypothetical protein YP_001583824.1 SMART: helix-turn-helix domain protein YP_001583827.1 KEGG: bte:BTH_II1027 GP65 YP_001583828.1 KEGG: aha:AHA_2027 hypothetical protein YP_001583829.1 KEGG: shw:Sputw3181_1180 hypothetical protein YP_001583830.1 KEGG: ecv:APECO1_4031 hypothetical protein YP_001583831.1 KEGG: pna:Pnap_3326 hypothetical protein YP_001583832.1 PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_A3071 hypothetical protein YP_001583833.1 KEGG: bte:BTH_II1036 GP74 YP_001583834.1 KEGG: bte:BTH_II1037 GP64 YP_001583836.1 KEGG: bvi:Bcep1808_4527 phage-related hypothetical protein YP_001583837.1 KEGG: bte:BTH_II1042 59R YP_001583838.1 KEGG: bte:BTH_II1043 hypothetical protein YP_001583839.1 PFAM: Terminase; KEGG: bte:BTH_II1044 phage terminase, large subunit YP_001583840.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: bte:BTH_II1045 head portal protein YP_001583841.1 PFAM: peptidase S14 ClpP; KEGG: bte:BTH_II1046 ClpP protease YP_001583842.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: bte:BTH_II1047 phage major capsid protein, HK97 family YP_001583843.1 KEGG: bte:BTH_II1048 hypothetical protein YP_001583844.1 KEGG: bte:BTH_II1049 gp7 YP_001583845.1 TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein; KEGG: bte:BTH_II1050 phage head-tail adaptor YP_001583846.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: bpm:BURPS1710b_1684 phage protein, HK97 GP10 family YP_001583847.1 KEGG: bpm:BURPS1710b_1685 GP10 YP_001583848.1 KEGG: bte:BTH_II1053 GP11 YP_001583849.1 PFAM: tail assembly chaperone; KEGG: bpm:BURPS1710b_1687 phage tail assembly chaperone YP_001583850.1 KEGG: bte:BTH_II1055 GP13 YP_001583851.1 TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; PFAM: Tape measure domain; KEGG: bte:BTH_II1056 GP14 YP_001583852.1 PFAM: minor tail family protein; KEGG: bpm:BURPS1710b_1689 phage minor tail protein YP_001583853.1 KEGG: bpm:BURPS1710b_1690 GP16 YP_001583854.1 TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; KEGG: bte:BTH_II1059 phage minor tail protein L YP_001583855.1 PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: bpm:BURPS1710b_1692 GP18 YP_001583856.1 PFAM: lambda tail assembly I; KEGG: bte:BTH_II1061 bacteriophage lambda tail assembly protein I YP_001583857.1 PFAM: Protein of unknown function DUF1983; KEGG: bte:BTH_II1062 host specificity protein J YP_001583858.1 KEGG: bte:BTH_II1063 GP21 YP_001583859.1 KEGG: bte:BTH_II1064 GP22 YP_001583861.1 PFAM: glycoside hydrolase family 24; KEGG: bpm:BURPS1710b_1695 lysozyme YP_001583862.1 KEGG: reu:Reut_A2419 hypothetical protein YP_001583863.1 KEGG: bte:BTH_II1069 GP28 YP_001583864.1 PFAM: Resolvase domain; Recombinase; KEGG: pst:PSPTO_4018 hypothetical protein YP_001583865.1 KEGG: bam:Bamb_4152 lysine exporter protein (LysE/YggA) YP_001583866.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4151 GCN5-related N-acetyltransferase YP_001583867.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bam:Bamb_4150 NADH:flavin oxidoreductase/NADH oxidase YP_001583868.1 PFAM: regulatory protein ArsR; KEGG: bam:Bamb_4149 transcriptional regulator, ArsR family YP_001583869.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4989 major facilitator superfamily MFS_1 YP_001583870.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_5057 transcriptional regulator, LysR family YP_001583871.1 PFAM: Patatin; KEGG: bam:Bamb_4143 patatin YP_001583872.1 PFAM: blue (type 1) copper domain protein; KEGG: bch:Bcen2424_4760 blue (type 1) copper domain protein YP_001583873.1 PFAM: metallophosphoesterase; KEGG: bch:Bcen2424_4759 metallophosphoesterase YP_001583874.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0971 ABC anion transporter, fused inner membrane subunits YP_001583875.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4139 ABC transporter related YP_001583876.1 PFAM: ImpA domain protein; KEGG: bur:Bcep18194_B0973 ImpA-like protein YP_001583877.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_B0974 protein of unknown function DUF1305 YP_001583878.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_B0975 protein of unknown function DUF879 YP_001583879.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bur:Bcep18194_B0976 protein of unknown function DUF1316 YP_001583880.1 KEGG: bur:Bcep18194_B0978 hypothetical protein YP_001583881.1 KEGG: bur:Bcep18194_B0979 AAA ATPase, Clp; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001583882.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_B0980 hypothetical protein YP_001583883.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bur:Bcep18194_B0981 protein of unknown function DUF877 YP_001583884.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bur:Bcep18194_B0982 protein of unknown function DUF796 YP_001583885.1 KEGG: bur:Bcep18194_B0983 hypothetical protein YP_001583886.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001583887.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001583888.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_B0984 protein of unknown function DUF876 YP_001583889.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_3479 rhs element Vgr protein YP_001583890.1 KEGG: bam:Bamb_3480 hypothetical protein YP_001583891.1 KEGG: bam:Bamb_3481 hypothetical protein YP_001583892.1 KEGG: bam:Bamb_3482 hypothetical protein YP_001583893.1 KEGG: bam:Bamb_3482 hypothetical protein YP_001583894.1 KEGG: bam:Bamb_3482 hypothetical protein YP_001583895.1 PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_3483 PaaR repeat-containing protein YP_001583896.1 TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_3484 OmpA/MotB domain protein YP_001583897.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bam:Bamb_3485 ImcF domain protein YP_001583898.1 TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_3486 OmpA/MotB domain protein YP_001583899.1 KEGG: bur:Bcep18194_B0998 hypothetical protein YP_001583900.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0999 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001583901.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_4750 transcriptional regulator, TetR family YP_001583902.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4132 transcriptional regulator, LysR family YP_001583903.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4131 short-chain dehydrogenase/reductase SDR YP_001583904.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bur:Bcep18194_B1003 transcriptional regulator, MerR family YP_001583905.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_4746 efflux transporter, RND family, MFP subunit YP_001583906.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bch:Bcen2424_4745 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001583907.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1006 RND efflux system, outer membrane lipoprotein, NodT family YP_001583908.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_B1011 cytosine/purines, uracil, thiamine, allantoin transporter YP_001583909.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1014 transcriptional regulator, LysR family YP_001583910.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1015 major facilitator superfamily (MFS_1) transporter YP_001583911.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1017 isochorismatase hydrolase YP_001583912.1 KEGG: bur:Bcep18194_B1022 hypothetical protein YP_001583913.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_5274 porin, gram-negative type YP_001583914.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_2714 integrase, catalytic region YP_001583915.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001583916.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bch:Bcen2424_4734 GreA/GreB family elongation factor YP_001583917.1 KEGG: bch:Bcen2424_4733 hypothetical protein YP_001583918.1 PFAM: CBS domain containing protein; KEGG: bur:Bcep18194_B1026 signal-transduction protein with CBS domains YP_001583919.1 PFAM: GTP cyclohydrolase II; KEGG: bch:Bcen2424_4731 GTP cyclohydrolase II YP_001583920.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: eca:ECA3744 GntR-family transcriptional regulator YP_001583921.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2190 PhnO-related protein YP_001583922.1 KEGG: pol:Bpro_5167 hypothetical protein YP_001583923.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_0972 short-chain dehydrogenase/reductase SDR YP_001583924.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001583925.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_5168 cupin 2, conserved barrel YP_001583926.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A1803 transcriptional regulator, AraC-family YP_001583927.1 PFAM: nitroreductase; KEGG: reh:H16_A1799 NAD(P)H nitroreductase YDGI YP_001583928.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: reh:H16_A1800 hypothetical protein YP_001583929.1 PFAM: Glutathione S-transferase domain; KEGG: reh:H16_A1801 glutathione S-transferase YP_001583930.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mms:mma_0969 acyl carrier protein phosphodiesterase YP_001583931.1 PFAM: GCN5-related N-acetyltransferase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: reh:H16_B1406 predicted nucleoside-diphosphate-sugar epimerase YP_001583932.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A1803 transcriptional regulator, AraC-family YP_001583934.1 PFAM: protein of unknown function DUF417; DoxX family protein; KEGG: reh:H16_A1804 hypothetical membrane spanning protein YP_001583935.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pol:Bpro_5165 transcriptional regulator, GntR family YP_001583936.1 KEGG: bvi:Bcep1808_5919 hypothetical protein YP_001583937.1 PFAM: protein of unknown function DUF692; KEGG: reu:Reut_A2688 hypothetical protein YP_001583938.1 KEGG: reu:Reut_A2689 hypothetical protein YP_001583939.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001583940.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate YP_001583941.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B0056 transcriptional regulator, AsnC family YP_001583942.1 KEGG: bvi:Bcep1808_6694 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001583943.1 KEGG: bur:Bcep18194_B1049 hypothetical protein YP_001583944.1 PFAM: autoinducer synthesis protein; KEGG: bam:Bamb_4118 autoinducer synthesis protein YP_001583945.1 KEGG: bch:Bcen2424_4725 hypothetical protein YP_001583946.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; sigma-70 region 4 domain protein; KEGG: bch:Bcen2424_4724 transcriptional regulator, LuxR family YP_001583947.1 PFAM: MgtC/SapB transporter; KEGG: bch:Bcen2424_4723 MgtC/SapB transporter YP_001583948.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_4114 outer membrane efflux protein YP_001583949.1 KEGG: bam:Bamb_4113 fusaric acid resistance protein conserved region YP_001583950.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride YP_001583951.1 KEGG: bur:Bcep18194_B1057 hypothetical protein YP_001583952.1 PFAM: metallophosphoesterase; KEGG: bch:Bcen2424_4717 metallophosphoesterase YP_001583953.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bur:Bcep18194_B1061 2OG-Fe(II) oxygenase YP_001583954.1 KEGG: bur:Bcep18194_B1062 hypothetical protein YP_001583955.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_4107 transcriptional regulator, IclR family YP_001583956.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1102 outer membrane protein (porin) YP_001583957.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B1103 Rieske (2Fe-2S) protein YP_001583958.1 KEGG: bam:Bamb_4104 hypothetical protein YP_001583959.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_4709 Rieske (2Fe-2S) domain protein YP_001583960.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria YP_001583961.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bch:Bcen2424_4707 cupin 2, conserved barrel domain protein YP_001583962.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1108 alpha/beta hydrolase YP_001583963.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bch:Bcen2424_4705 transcriptional regulator, IclR family YP_001583964.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4098 short-chain dehydrogenase/reductase SDR YP_001583965.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bch:Bcen2424_4703 thiamine pyrophosphate enzyme domain protein TPP-binding YP_001583966.1 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis YP_001583967.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4095 betaine-aldehyde dehydrogenase YP_001583968.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1114 glyoxalase/bleomycin resistance protein/dioxygenase YP_001583969.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_4093 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001583970.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_4092 major facilitator superfamily MFS_1 YP_001583972.1 PFAM: protein of unknown function DUF296; KEGG: bam:Bamb_4088 protein of unknown function DUF296 YP_001583973.1 KEGG: bam:Bamb_4087 hypothetical protein YP_001583974.1 PFAM: natural resistance-associated macrophage protein; KEGG: bam:Bamb_4086 natural resistance-associated macrophage protein YP_001583975.1 KEGG: bam:Bamb_4085 hypothetical protein YP_001583977.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_5216 UspA domain protein YP_001583978.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001583979.1 PFAM: Carbohydrate-selective porin OprB; KEGG: bxe:Bxe_B1832 carbohydrate-selective porin, OprB family YP_001583980.1 KEGG: bur:Bcep18194_B1132 hypothetical protein YP_001583981.1 PFAM: N-acetyltransferase; KEGG: bvi:Bcep1808_5210 arylamine N-acetyltransferase YP_001583982.1 KEGG: bur:Bcep18194_B1134 helix-turn-helix protein, CopG YP_001583983.1 KEGG: bur:Bcep18194_B1135 hypothetical protein YP_001583984.1 TIGRFAM: methyltransferase; KEGG: bvi:Bcep1808_5207 methyltransferase YP_001583985.1 PFAM: NAD-glutamate dehydrogenase; KEGG: bch:Bcen2424_4683 NAD-glutamate dehydrogenase YP_001583986.1 KEGG: bch:Bcen2424_4682 cytoplasmic protein YP_001583987.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown YP_001583988.1 PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_4074 class II aldolase/adducin family protein YP_001583989.1 PFAM: Urea transporter; KEGG: bur:Bcep18194_B1140 UreA transporter YP_001583990.1 PFAM: protein of unknown function DUF1089; KEGG: bam:Bamb_4072 protein of unknown function DUF1089 YP_001583991.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_4071 alpha/beta hydrolase fold YP_001583992.1 KEGG: bur:Bcep18194_B1143 metal-dependent hydrolase YP_001583993.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4069 short-chain dehydrogenase/reductase SDR YP_001583994.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_4674 flavin-containing monooxygenase FMO YP_001583995.1 PFAM: YhhN family protein; KEGG: bch:Bcen2424_4673 YhhN family protein YP_001583996.1 KEGG: bam:Bamb_4061 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001583997.1 PFAM: regulatory protein MerR; KEGG: bam:Bamb_4060 transcriptional regulator, MerR family YP_001583998.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_5196 GCN5-related N-acetyltransferase YP_001583999.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4056 drug resistance transporter, EmrB/QacA subfamily YP_001584000.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bch:Bcen2424_4665 methyl-accepting chemotaxis sensory transducer YP_001584001.1 PFAM: NERD domain protein; KEGG: bvi:Bcep1808_5191 hypothetical protein YP_001584002.1 PFAM: BetR domain protein; KEGG: bur:Bcep18194_B1160 response regulator receiver domain protein (CheY-like) YP_001584003.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: bur:Bcep18194_B1162 TrkA-like protein YP_001584004.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1229 short-chain dehydrogenase/reductase SDR YP_001584005.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4041 transcriptional regulator, LysR family YP_001584006.1 PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_B1231 salicylate 1-monooxygenase YP_001584007.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7505 ABC transporter, ATPase subunit YP_001584008.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_6754 binding-protein-dependent transport systems inner membrane component YP_001584009.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bur:Bcep18194_C7503 ABC transporter, periplasmic ligand binding protein, aliphatic sulphonates YP_001584010.1 PFAM: esterase; KEGG: bur:Bcep18194_B1232 esterase YP_001584011.1 KEGG: bur:Bcep18194_B1233 hypothetical protein YP_001584012.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_4037 porin, gram-negative type YP_001584013.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4606 transcriptional regulator, LysR family YP_001584014.1 PFAM: aldo/keto reductase; KEGG: bch:Bcen2424_4605 aldo/keto reductase YP_001584015.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B1237 protein of unknown function DUF81 YP_001584016.1 KEGG: bur:Bcep18194_B1238 hypothetical protein YP_001584017.1 PFAM: protein of unknown function DUF1486; KEGG: bch:Bcen2424_4602 protein of unknown function DUF1486 YP_001584018.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4032 transcriptional regulator, LysR family YP_001584019.1 KEGG: bam:Bamb_4031 hypothetical protein YP_001584020.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_B1244 peptidase M23B YP_001584021.1 PFAM: beta-lactamase; KEGG: bch:Bcen2424_4599 beta-lactamase YP_001584022.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1246 transcriptional regulator, LysR family YP_001584023.1 KEGG: bur:Bcep18194_B1247 hypothetical protein YP_001584024.1 PFAM: Transglycosylase-associated protein; KEGG: bur:Bcep18194_B1248 transglycosylase-associated protein YP_001584025.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_4595 ABC transporter related YP_001584026.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1250 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit YP_001584027.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_5116 binding-protein-dependent transport systems inner membrane component YP_001584028.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1252 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit YP_001584029.1 PFAM: extracellular solute-binding protein family 5; KEGG: bch:Bcen2424_4591 extracellular solute-binding protein, family 5 YP_001584030.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001584031.1 KEGG: bur:Bcep18194_B1253 ABC peptide transporter, periplasmic ligand binding protein YP_001584032.1 catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis YP_001584033.1 KEGG: bur:Bcep18194_B1255 transcriptional regulator, RpiR family YP_001584034.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_B1258 ABC peptide transporter, periplasmic ligand binding protein YP_001584035.1 KEGG: bur:Bcep18194_B1259 hypothetical protein YP_001584036.1 KEGG: bur:Bcep18194_B1260 hypothetical protein YP_001584037.1 PFAM: protein of unknown function UPF0187; KEGG: bur:Bcep18194_B1264 hypothetical protein YP_001584038.1 KEGG: bch:Bcen2424_4579 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001584039.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bcn:Bcen_3790 transcriptional regulator, GntR family YP_001584040.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B1267 MscS mechanosensitive ion channel YP_001584041.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1269 transcriptional regulator, LysR family YP_001584042.1 KEGG: bch:Bcen2424_4574 threonine efflux protein-like protein YP_001584043.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1271 drug resistance transporter EmrB/QacA subfamily YP_001584044.1 PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1272 isochorismatase hydrolase YP_001584045.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_4000 transcriptional regulator, MarR family YP_001584046.1 KEGG: bur:Bcep18194_B1274 hypothetical protein YP_001584047.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bur:Bcep18194_B1275 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_001584048.1 KEGG: bch:Bcen2424_4568 hypothetical protein YP_001584049.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3996 transcriptional regulator, LysR family YP_001584050.1 KEGG: bur:Bcep18194_B1279 hypothetical protein YP_001584051.1 KEGG: bam:Bamb_3994 hypothetical protein YP_001584052.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bvi:Bcep1808_5094 magnesium-translocating P-type ATPase YP_001584053.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bch:Bcen2424_4563 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001584054.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1284 extracellular solute-binding protein, family 3 YP_001584055.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3990 extracellular solute-binding protein, family 3 YP_001584056.1 KEGG: bam:Bamb_3989 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase YP_001584057.1 PFAM: Amidase; KEGG: bam:Bamb_3988 amidase YP_001584058.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid YP_001584059.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_3986 transcriptional regulator, GntR family YP_001584060.1 KEGG: bam:Bamb_3985 hypothetical protein YP_001584061.1 KEGG: bam:Bamb_3984 hypothetical protein YP_001584062.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4560 major facilitator superfamily MFS_1 YP_001584063.1 KEGG: bur:Bcep18194_B1287 hypothetical protein YP_001584064.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bam:Bamb_3981 penicillin-binding protein 1C YP_001584065.1 PFAM: alpha-2-macroglobulin domain protein; KEGG: bch:Bcen2424_4555 alpha-2-macroglobulin domain protein YP_001584066.1 KEGG: bur:Bcep18194_B1292 hypothetical protein YP_001584067.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bam:Bamb_3978 glucose-methanol-choline oxidoreductase YP_001584068.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4552 cytochrome c, class I YP_001584069.1 PFAM: DoxX family protein; KEGG: bam:Bamb_3976 DoxX family protein YP_001584070.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_3975 porin, gram-negative type YP_001584072.1 PFAM: NUDIX hydrolase; KEGG: mac:MA1648 MutT/NUDIX family protein YP_001584073.1 KEGG: fnu:FN0012 DNA topology modulation protein FlaR-related protein YP_001584074.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4548 major facilitator superfamily MFS_1 YP_001584075.1 KEGG: bch:Bcen2424_4547 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001584076.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_5078 transcriptional regulator, LysR family YP_001584077.1 PFAM: protein of unknown function DUF1255; KEGG: bch:Bcen2424_4545 protein of unknown function DUF1255 YP_001584078.1 KEGG: bch:Bcen2424_4544 hypothetical protein YP_001584079.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bur:Bcep18194_B1936 hypothetical protein YP_001584080.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bch:Bcen2424_3472 transposase IS116/IS110/IS902 family protein YP_001584081.1 PFAM: protein of unknown function DUF403; KEGG: bam:Bamb_3520 protein of unknown function DUF403 YP_001584082.1 PFAM: transglutaminase domain protein; KEGG: bch:Bcen2424_4110 transglutaminase, N-terminal domain protein YP_001584083.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bch:Bcen2424_4111 transglutaminase, N-terminal domain protein YP_001584084.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bam:Bamb_3523 protein of unknown function DUF404 YP_001584085.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bam:Bamb_3524 transglutaminase, N-terminal domain protein YP_001584086.1 KEGG: bch:Bcen2424_6769 aerobic-type carbon monoxide dehydrogenase large subunit YP_001584087.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_6768 (2Fe-2S)-binding domain protein YP_001584088.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: transferase hexapeptide repeat containing protein; Autotransporter beta- domain protein; KEGG: bch:Bcen2424_6767 outer membrane autotransporter barrel domain YP_001584090.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bam:Bamb_3967 Cl-channel, voltage-gated family protein YP_001584091.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_4542 transcriptional regulator, MarR family YP_001584092.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: bam:Bamb_3965 CBS domain containing membrane protein YP_001584093.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1305 transcriptional regulator, LysR family YP_001584094.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1306 major facilitator superfamily (MFS_1) transporter YP_001584095.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_B1307 D-isomer specific 2-hydroxyacid dehydrogenase YP_001584096.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1308 transcriptional regulator, LysR family YP_001584097.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bam:Bamb_3961 sodium/calcium exchanger membrane region YP_001584098.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation YP_001584099.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bam:Bamb_3959 phenylacetate-CoA ligase YP_001584100.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B1319 enoyl-CoA hydratase/isomerase YP_001584101.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bam:Bamb_3957 multiple antibiotic resistance (MarC)-related proteins YP_001584102.1 PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_5065 aldo/keto reductase YP_001584103.1 PFAM: Abortive infection protein; KEGG: bur:Bcep18194_B1322 abortive infection protein YP_001584104.1 KEGG: bvi:Bcep1808_5063 hypothetical protein YP_001584105.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_4523 alcohol dehydrogenase GroES domain protein YP_001584106.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1327 major facilitator superfamily (MFS_1) transporter YP_001584107.1 KEGG: bur:Bcep18194_B1328 hypothetical protein YP_001584108.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_4519 GCN5-related N-acetyltransferase YP_001584109.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_3950 transcriptional regulator, GntR family YP_001584110.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bvi:Bcep1808_3441 PAS/PAC sensor hybrid histidine kinase YP_001584111.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: bch:Bcen2424_4517 peptidase S1 and S6, chymotrypsin/Hap YP_001584112.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1334 drug resistance transporter Bcr/CflA subfamily YP_001584113.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bam:Bamb_3945 fumarylacetoacetate (FAA) hydrolase YP_001584114.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_4513 transcriptional regulator, AraC family YP_001584115.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bam:Bamb_3942 uracil-DNA glycosylase superfamily YP_001584116.1 KEGG: bch:Bcen2424_4511 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_001584117.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: bch:Bcen2424_4510 response regulator receiver and ANTAR domain protein YP_001584118.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bch:Bcen2424_4509 uroporphyrin-III C-methyltransferase YP_001584119.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1343 major facilitator superfamily (MFS_1) transporter YP_001584120.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_4506 nitrite reductase (NAD(P)H), large subunit YP_001584121.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_4505 nitrite reductase (NAD(P)H), small subunit YP_001584122.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: bam:Bamb_3934 molybdopterin oxidoreductase YP_001584123.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bam:Bamb_3932 protein of unknown function DUF470 YP_001584124.1 PFAM: virulence factor family protein; KEGG: bam:Bamb_3931 virulence factor family protein YP_001584125.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1356 transcriptional regulator, GntR family with aminotransferase activity YP_001584126.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4494 major facilitator superfamily MFS_1 YP_001584127.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate YP_001584128.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bch:Bcen2424_4492 GntR domain protein YP_001584130.1 PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_4491 extracellular solute-binding protein, family 1 YP_001584131.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bam:Bamb_3925 diguanylate cyclase YP_001584132.1 KEGG: bur:Bcep18194_B1362 hypothetical protein YP_001584133.1 KEGG: bvi:Bcep1808_5036 hypothetical protein YP_001584134.1 PFAM: metallophosphoesterase; KEGG: bcn:Bcen_3887 twin-arginine translocation pathway signal YP_001584135.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_B1405 phage integrase YP_001584136.1 KEGG: bch:Bcen2424_4472 hypothetical protein YP_001584137.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1409 major facilitator superfamily (MFS_1) transporter YP_001584138.1 TIGRFAM: methyltransferase FkbM family; KEGG: mag:amb2566 SAM-dependent methyltransferase YP_001584139.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bam:Bamb_3900 cold-shock DNA-binding domain protein YP_001584140.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001584141.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1455 major facilitator superfamily (MFS_1) transporter YP_001584142.1 PFAM: protein of unknown function DUF1326; KEGG: bch:Bcen2424_4458 protein of unknown function DUF1326 YP_001584143.1 KEGG: bam:Bamb_3893 metal-binding integral membrane protein-like protein YP_001584144.1 KEGG: bam:Bamb_3892 efflux transporter, RND family, MFP subunit YP_001584145.1 KEGG: bch:Bcen2424_4455 collagen triple helix repeat YP_001584146.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bch:Bcen2424_4452 TonB-dependent receptor YP_001584147.1 KEGG: bch:Bcen2424_4459 hypothetical protein YP_001584148.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_3846 methyltransferase type 11 YP_001584149.1 KEGG: bch:Bcen2424_4451 hypothetical protein YP_001584150.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine YP_001584151.1 PFAM: YheO domain protein; KEGG: bur:Bcep18194_B1494 hypothetical protein YP_001584152.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_001584153.1 TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1519 phosphoesterase YP_001584154.1 KEGG: bur:Bcep18194_B1520 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase YP_001584155.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_B1521 hypothetical protein YP_001584156.1 KEGG: bur:Bcep18194_B1522 alpha,alpha-trehalose-phosphate synthase (UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20 YP_001584157.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1523 methyl-accepting chemotaxis sensory transducer YP_001584158.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bcn:Bcen_3927 TonB-dependent receptor YP_001584159.1 KEGG: bch:Bcen2424_4437 BNR/Asp-box repeat protein YP_001584160.1 PFAM: extracellular solute-binding protein family 3; KEGG: bch:Bcen2424_4432 extracellular solute-binding protein, family 3 YP_001584161.1 KEGG: bam:Bamb_3863 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase YP_001584162.1 KEGG: bur:Bcep18194_B1532 flavin-dependent oxidoreductase YP_001584163.1 PFAM: luciferase family protein; KEGG: bam:Bamb_3861 luciferase family protein YP_001584164.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1534 ABC amino acid transporter, periplasmic ligand binding protein YP_001584165.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_4981 GCN5-related N-acetyltransferase YP_001584166.1 SMART: helix-turn-helix domain protein; KEGG: bur:Bcep18194_B1536 transcriptional regulator, XRE family YP_001584167.1 KEGG: bur:Bcep18194_B1537 hypothetical protein YP_001584168.1 KEGG: bur:Bcep18194_B1537 hypothetical protein YP_001584169.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B1538 succinylglutamate desuccinylase/aspartoacylase YP_001584170.1 KEGG: bvi:Bcep1808_4978 hypothetical protein YP_001584171.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bch:Bcen2424_4423 diguanylate cyclase YP_001584172.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase YP_001584173.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bam:Bamb_3852 (2Fe-2S)-binding domain protein YP_001584174.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1543 cytochrome c, class I YP_001584175.1 KEGG: bvi:Bcep1808_4975 hypothetical protein YP_001584176.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B1545 outer membrane protein, OmpA/MotB family YP_001584177.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1546 outer membrane protein (porin) YP_001584178.1 PFAM: Aldose 1-epimerase; KEGG: bam:Bamb_6330 aldose 1-epimerase YP_001584179.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_6331 transcriptional regulator, AraC family YP_001584180.1 catalyzes the interconversion of D-xylose to D-xylulose YP_001584181.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bvi:Bcep1808_6450 xylulokinase YP_001584182.1 KEGG: bvi:Bcep1808_6449 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_001584183.1 with XylFH is part of the high affinity xylose ABC transporter YP_001584184.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_6447 inner-membrane translocator YP_001584185.1 KEGG: bch:Bcen2424_6765 hypothetical protein YP_001584186.1 PFAM: protein of unknown function DUF72; KEGG: bam:Bamb_6343 protein of unknown function DUF72 YP_001584187.1 KEGG: pfo:Pfl_3187 hypothetical protein YP_001584188.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4409 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_001584189.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4408 cytochrome c, class I YP_001584190.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bch:Bcen2424_4407 isoquinoline 1-oxidoreductase YP_001584191.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_4406 (2Fe-2S)-binding domain protein YP_001584192.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B1604 antibiotic biosynthesis monooxygenase YP_001584193.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4958 alcohol dehydrogenase, zinc-binding domain protein YP_001584194.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_4403 transcriptional regulator, TetR family YP_001584195.1 KEGG: bch:Bcen2424_4402 hypothetical protein YP_001584196.1 PFAM: cation efflux protein; KEGG: bam:Bamb_3810 cation efflux protein YP_001584197.1 PFAM: helix-turn-helix domain protein; KEGG: bam:Bamb_3808 transcriptional regulator, XRE family YP_001584198.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bam:Bamb_3807 HipA domain protein YP_001584199.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_4395 4-hydroxyphenylpyruvate dioxygenase YP_001584200.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4394 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_001584201.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: nmu:Nmul_A1599 HNH nuclease YP_001584202.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bur:Bcep18194_B1627 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001584203.1 PFAM: plasmid stabilization system; KEGG: bam:Bamb_6084 plasmid stabilization system YP_001584204.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: bam:Bamb_6083 transcriptional regulators, CopG/Arc/MetJ family YP_001584205.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1629 transcriptional regulator, IclR family YP_001584206.1 SMART: helicase c2; KEGG: bch:Bcen2424_4389 helicase C2 YP_001584207.1 PFAM: VRR-NUC domain protein; KEGG: bch:Bcen2424_4388 hypothetical protein YP_001584208.1 PFAM: MltA-interacting MipA family protein; KEGG: bvi:Bcep1808_4915 MltA-interacting MipA family protein YP_001584209.1 KEGG: bam:Bamb_3798 hypothetical protein YP_001584210.1 KEGG: bch:Bcen2424_4385 hypothetical protein YP_001584211.1 KEGG: bam:Bamb_3797 hypothetical protein YP_001584212.1 PFAM: CBS domain containing protein; KEGG: bvi:Bcep1808_4911 CBS domain containing protein YP_001584213.1 PFAM: PRC-barrel domain protein; KEGG: bvi:Bcep1808_4910 PRC-barrel domain protein YP_001584214.1 KEGG: rha:RHA1_ro08602 transposase YP_001584215.1 KEGG: bch:Bcen2424_4380 hypothetical protein YP_001584216.1 KEGG: bch:Bcen2424_4379 hypothetical protein YP_001584217.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bch:Bcen2424_4378 transport-associated YP_001584218.1 KEGG: bch:Bcen2424_4377 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001584219.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_3791 sigma54 specific transcriptional regulator, fis family YP_001584220.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bam:Bamb_3790 methyl-accepting chemotaxis sensory transducer YP_001584221.1 KEGG: bch:Bcen2424_4374 hypothetical protein YP_001584222.1 PFAM: UspA domain protein; KEGG: bam:Bamb_3786 UspA domain protein YP_001584223.1 PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_4371 amino acid permease-associated region YP_001584224.1 KEGG: bvi:Bcep1808_4900 lipoprotein transmembrane YP_001584225.1 KEGG: bch:Bcen2424_4369 uncharacterized membrane-associated protein YP_001584226.1 PFAM: protein of unknown function DUF985; KEGG: bam:Bamb_3777 protein of unknown function DUF985 YP_001584227.1 PFAM: UspA domain protein; KEGG: bur:Bcep18194_B1650 universal stress protein, UspA family YP_001584228.1 KEGG: bch:Bcen2424_4366 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001584229.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bam:Bamb_3774 two component transcriptional regulator, LuxR family YP_001584230.1 PFAM: protein of unknown function DUF1311; KEGG: bvi:Bcep1808_4893 protein of unknown function DUF1311 YP_001584231.1 KEGG: bam:Bamb_3772 hypothetical protein YP_001584232.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bur:Bcep18194_B1659 peptidoglycan glycosyltransferase YP_001584233.1 PFAM: proline racemase; KEGG: bur:Bcep18194_B1660 proline racemase YP_001584234.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_3768 extracellular ligand-binding receptor YP_001584235.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_4890 regulatory protein GntR, HTH YP_001584236.1 catalyzes the formation of L-proline from L-ornithine YP_001584237.1 PFAM: response regulator receiver; KEGG: bch:Bcen2424_4356 response regulator receiver protein YP_001584238.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bch:Bcen2424_4355 transcriptional regulator, Crp/Fnr family YP_001584239.1 KEGG: bch:Bcen2424_4353 hypothetical protein YP_001584240.1 KEGG: bur:Bcep18194_B1669 hypothetical protein YP_001584241.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001584242.1 PFAM: amino acid permease-associated region; KEGG: bam:Bamb_3758 amino acid permease-associated region YP_001584243.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_4348 transcriptional regulator, AsnC family YP_001584244.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B1673 protein of unknown function DUF6, transmembrane YP_001584245.1 PFAM: phosphoesterase; KEGG: bam:Bamb_3755 phospholipase C YP_001584246.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bch:Bcen2424_4344 di-haem cytochrome c peroxidase YP_001584247.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_B1676 methylase involved in ubiquinone/menaquinone biosynthesis-like YP_001584248.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_3751 transcriptional regulator, GntR family YP_001584249.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3750 short-chain dehydrogenase/reductase SDR YP_001584250.1 PFAM: protein of unknown function DUF849; KEGG: bch:Bcen2424_4333 protein of unknown function DUF849 YP_001584251.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4332 major facilitator superfamily MFS_1 YP_001584252.1 PFAM: short chain fatty acid transporter; KEGG: bam:Bamb_3747 hypothetical protein YP_001584253.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_B1678 Cl-channel, voltage gated YP_001584254.1 PFAM: Amidohydrolase 3; KEGG: bch:Bcen2424_4328 N-isopropylammelide isopropylaminohydrolase YP_001584255.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_3744 glyoxalase/bleomycin resistance protein/dioxygenase YP_001584256.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1679 outer membrane protein (porin) YP_001584257.1 KEGG: bam:Bamb_3741 hypothetical protein YP_001584258.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4325 transcriptional regulator, LysR family YP_001584259.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bch:Bcen2424_4324 fusaric acid resistance protein conserved region YP_001584260.1 KEGG: bch:Bcen2424_4323 hypothetical protein YP_001584261.1 PFAM: peptidase S58 DmpA; KEGG: bam:Bamb_3737 peptidase S58, DmpA YP_001584262.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1685 amino acid transporter YP_001584263.1 PFAM: regulatory protein LuxR; KEGG: bam:Bamb_3735 transcriptional regulator, LuxR family YP_001584264.1 PFAM: dienelactone hydrolase; KEGG: mlo:mlr4903 hypothetical protein YP_001584265.1 Secreted repeat of unknown function; PFAM: Secreted repeat of unknown function; KEGG: bur:Bcep18194_B1696 secreted conserved hypothetical protein YP_001584266.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1697 methylmalonate-semialdehyde dehydrogenase YP_001584267.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_001584268.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3728 transcriptional regulator, LysR family YP_001584269.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bam:Bamb_3727 major facilitator superfamily MFS_1 YP_001584270.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_4309 transcriptional regulator, MarR family YP_001584271.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_3725 cupin 2, conserved barrel domain protein YP_001584272.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bam:Bamb_3724 transcriptional regulator, AraC family YP_001584273.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3723 short-chain dehydrogenase/reductase SDR YP_001584274.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1709 major facilitator superfamily (MFS_1) transporter YP_001584275.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1710 major facilitator superfamily (MFS_1) transporter YP_001584276.1 PFAM: beta-lactamase domain protein; KEGG: bvi:Bcep1808_4855 beta-lactamase domain protein YP_001584277.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bam:Bamb_3720 transcriptional regulator, IclR family YP_001584278.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_3718 transcriptional regulator, AsnC family YP_001584279.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1714 lysine exporter family protein (LysE/YggA) YP_001584280.1 KEGG: bch:Bcen2424_4297 membrane protein-like protein YP_001584281.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bam:Bamb_3714 methyl-accepting chemotaxis sensory transducer YP_001584282.1 activates fatty acids by binding to coenzyme A YP_001584283.1 PFAM: cyclic nucleotide-binding; KEGG: bam:Bamb_3712 cyclic nucleotide-binding protein YP_001584284.1 PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B1726 acriflavin resistance protein YP_001584285.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3710 efflux transporter, RND family, MFP subunit YP_001584286.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_4291 RND efflux system, outer membrane lipoprotein, NodT family YP_001584287.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_4290 two component heavy metal response transcriptional regulator, winged helix family YP_001584288.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B1730 heavy metal sensor signal transduction histidine kinase YP_001584289.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_4281 lysine exporter protein (LysE/YggA) YP_001584290.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bam:Bamb_3705 transcriptional regulator, AraC family YP_001584291.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1733 short-chain dehydrogenase/reductase SDR YP_001584292.1 KEGG: bvi:Bcep1808_4841 hypothetical protein YP_001584293.1 PFAM: protein of unknown function UPF0118; KEGG: bch:Bcen2424_4274 protein of unknown function UPF0118 YP_001584294.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B1736 NADH-flavin oxidoreductase/NADH oxidase YP_001584295.1 PFAM: ThiJ/PfpI domain protein; KEGG: bvi:Bcep1808_4838 ThiJ/PfpI domain protein YP_001584296.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bch:Bcen2424_4266 transcriptional regulator, GntR family YP_001584297.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bch:Bcen2424_4265 alkylhydroperoxidase like protein, AhpD family YP_001584298.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_4830 cupin 2, conserved barrel domain protein YP_001584299.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_4829 porin, gram-negative type YP_001584300.1 PFAM: Squalene/phytoene synthase; KEGG: bvi:Bcep1808_4828 squalene/phytoene synthase YP_001584301.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bam:Bamb_3685 glycerophosphoryl diester phosphodiesterase YP_001584302.1 PFAM: Rhodanese domain protein; KEGG: bam:Bamb_3684 rhodanese domain protein YP_001584303.1 PFAM: cysteine dioxygenase type I; KEGG: bam:Bamb_3683 cysteine dioxygenase type I YP_001584304.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3682 transcriptional regulator, LysR family YP_001584305.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bvi:Bcep1808_4825 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001584306.1 PFAM: luciferase family protein; KEGG: bur:Bcep18194_B1755 alkanesulfonate monooxygenase YP_001584307.1 PFAM: class II aldolase/adducin family protein; KEGG: bch:Bcen2424_4255 class II aldolase/adducin family protein YP_001584308.1 PFAM: NMT1/THI5 like domain protein; KEGG: bam:Bamb_3678 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components YP_001584309.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3677 binding-protein-dependent transport systems inner membrane component YP_001584310.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_4252 ABC transporter related YP_001584311.1 KEGG: bam:Bamb_3675 cytochrome c, class I YP_001584312.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: bam:Bamb_3674 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_001584313.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: bch:Bcen2424_4249 MOSC domain protein beta barrel domain protein YP_001584314.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bur:Bcep18194_B1763 periplasmic sensor signal transduction histidine kinase YP_001584315.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B1764 two component transcriptional regulator, winged helix family YP_001584316.1 PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_B4636 aldehyde dehydrogenase YP_001584317.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: bch:Bcen2424_5822 glycosyl hydrolase, BNR repeat-containing protein YP_001584318.1 KEGG: bch:Bcen2424_5820 exporter, RND superfamily YP_001584319.1 PFAM: protein of unknown function DUF1302; KEGG: bch:Bcen2424_5819 protein of unknown function DUF1302 YP_001584320.1 PFAM: protein of unknown function DUF1329; KEGG: bur:Bcep18194_C6838 protein of unknown function DUF1329 YP_001584321.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B0605 cytochrome c, class I YP_001584322.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: lil:LA4178 GMC oxidoreductase YP_001584323.1 KEGG: lic:LIC13333 hypothetical protein YP_001584324.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_1113 transcriptional regulatory protein, AraC family YP_001584325.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_5811 two component transcriptional regulator, winged helix family YP_001584326.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_5810 periplasmic sensor signal transduction histidine kinase YP_001584327.1 KEGG: bur:Bcep18194_B3052 hypothetical protein YP_001584328.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_3896 efflux transporter, RND family, MFP subunit YP_001584329.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_C6824 hydrophobe/amphiphile efflux pump YP_001584330.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_C6823 RND efflux system, outer membrane lipoprotein, NodT family YP_001584331.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6822 two component transcriptional regulator, winged helix family YP_001584332.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B1767 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein YP_001584333.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1768 ABC Fe3+ siderophore transporter, inner membrane subunit YP_001584334.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_B1769 ABC transporter, ATPase subunit YP_001584335.1 PFAM: porin Gram-negative type; porin; KEGG: bam:Bamb_3663 porin, gram-negative type YP_001584336.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1771 zinc-containing alcohol dehydrogenase superfamily YP_001584337.1 KEGG: bcn:Bcen_4127 hypothetical protein YP_001584338.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1773 transcriptional regulator, AraC family YP_001584339.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: vei:Veis_4162 DNA binding domain, excisionase family YP_001584340.1 KEGG: bur:Bcep18194_B1777 2-dehydro-3-deoxyglucarate aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_001584341.1 KEGG: bur:Bcep18194_B1778 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase YP_001584342.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bch:Bcen2424_4235 5-carboxymethyl-2-hydroxymuconate isomerase YP_001584343.1 KEGG: bam:Bamb_3656 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B YP_001584344.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4233 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_001584345.1 KEGG: bch:Bcen2424_4232 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_001584346.1 KEGG: bch:Bcen2424_4231 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_001584347.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bam:Bamb_3652 transcriptional regulator, MarR family YP_001584348.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: bch:Bcen2424_4229 male sterility C-terminal domain YP_001584349.1 KEGG: bch:Bcen2424_4228 hypothetical protein YP_001584350.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bch:Bcen2424_4227 peptidoglycan glycosyltransferase YP_001584351.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: bch:Bcen2424_4226 sodium/hydrogen exchanger YP_001584352.1 PFAM: cytochrome c class I; KEGG: bur:Bcep18194_B1792 cytochrome c, class I YP_001584353.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bam:Bamb_3646 glucose-methanol-choline oxidoreductase YP_001584354.1 KEGG: bch:Bcen2424_4223 hypothetical protein YP_001584356.1 KEGG: bam:Bamb_3644 hypothetical protein YP_001584357.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bur:Bcep18194_B1797 alanine dehydrogenase and pyridine nucleotide transhydrogenase YP_001584358.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: bam:Bamb_3642 PHP C-terminal domain protein YP_001584359.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: bch:Bcen2424_4218 transcriptional regulators, TraR/DksA family YP_001584360.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bch:Bcen2424_4217 undecaprenyl-phosphate galactose phosphotransferase YP_001584361.1 SMART: regulatory protein Crp; KEGG: bam:Bamb_3639 transcriptional regulator, Crp/Fnr family YP_001584362.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bur:Bcep18194_B1803 cyclic nucleotide-binding domain (cNMP-BD) protein YP_001584363.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides YP_001584364.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_3636 acyl-CoA dehydrogenase, type 2, C-terminal domain YP_001584365.1 KEGG: bvi:Bcep1808_4781 seryl-tRNA synthetase-like protein YP_001584366.1 PFAM: Domain of unknown function DUF1839; KEGG: bam:Bamb_3634 hypothetical protein YP_001584367.1 KEGG: bch:Bcen2424_4210 beta-mannosidase YP_001584368.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bam:Bamb_3632 sigma54 specific transcriptional regulator, fis family YP_001584369.1 KEGG: bpm:BURPS1710b_A1695 hypothetical protein YP_001584370.1 KEGG: bur:Bcep18194_B1811 acyltransferase-like YP_001584371.1 KEGG: bam:Bamb_3629 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001584372.1 KEGG: bam:Bamb_3628 hypothetical protein YP_001584373.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_3626 glycosyl transferase, group 1 YP_001584374.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_3625 glycosyl transferase, group 1 YP_001584375.1 PFAM: polysaccharide biosynthesis protein; KEGG: bch:Bcen2424_4200 polysaccharide biosynthesis protein YP_001584376.1 PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_4199 glycosyl transferase, group 1 YP_001584377.1 KEGG: bch:Bcen2424_4198 hypothetical protein YP_001584378.1 PFAM: acyltransferase 3; KEGG: bvi:Bcep1808_4772 acyltransferase 3 YP_001584379.1 KEGG: bvi:Bcep1808_4771 hypothetical protein YP_001584380.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bvi:Bcep1808_4770 lipopolysaccharide biosynthesis YP_001584381.1 PFAM: polysaccharide export protein; KEGG: bvi:Bcep1808_4769 polysaccharide export protein YP_001584382.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bam:Bamb_3617 beta-glucosidase YP_001584383.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bur:Bcep18194_C7037 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001584384.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bam:Bamb_3596 protein of unknown function UPF0029 YP_001584385.1 PFAM: protein of unknown function DUF344; KEGG: bch:Bcen2424_4191 protein of unknown function DUF344 YP_001584386.1 KEGG: bch:Bcen2424_4181 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001584387.1 KEGG: bam:Bamb_3592 hypothetical protein YP_001584388.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bam:Bamb_3591 DEAD/H associated domain protein YP_001584389.1 PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_4178 amino acid permease-associated region YP_001584390.1 TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4175 transcriptional regulator, LysR family YP_001584391.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bch:Bcen2424_4172 protocatechuate 3,4-dioxygenase, beta subunit YP_001584392.1 KEGG: bch:Bcen2424_4171 protocatechuate 3,4-dioxygenase, alpha subunit; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_001584394.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: bch:Bcen2424_4167 peptidase M55, D-aminopeptidase YP_001584395.1 PFAM: peptidase S58 DmpA; KEGG: bch:Bcen2424_4166 peptidase S58, DmpA YP_001584396.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4722 binding-protein-dependent transport systems inner membrane component YP_001584397.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4721 binding-protein-dependent transport systems inner membrane component YP_001584398.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_B1867 ABC dipeptide/oligopeptide/nickel family transporter, periplasmic ligand binding protein YP_001584399.1 KEGG: bam:Bamb_3570 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001584400.1 PFAM: peptidase T2 asparaginase 2; KEGG: bvi:Bcep1808_4718 peptidase T2, asparaginase 2 YP_001584401.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bch:Bcen2424_4160 transcriptional regulator, RpiR family YP_001584402.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: bch:Bcen2424_4156 choline/carnitine/betaine transporter YP_001584403.1 KEGG: bam:Bamb_3563 hypothetical protein YP_001584404.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: bam:Bamb_3562 methyltransferase type 11 YP_001584405.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_3561 metallophosphoesterase YP_001584406.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bur:Bcep18194_B1878 di-haem cytochrome c peroxidase YP_001584407.1 KEGG: bur:Bcep18194_B1879 hypothetical protein YP_001584408.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_3558 transcriptional regulator, GntR family YP_001584409.1 KEGG: bur:Bcep18194_B1881 hypothetical protein YP_001584410.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1885 major facilitator superfamily (MFS_1) transporter YP_001584411.1 catalyzes the formation of catechol from salicylate YP_001584412.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B1887 maleylacetoacetate isomerase YP_001584413.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_4146 fumarylacetoacetate (FAA) hydrolase YP_001584414.1 TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B1889 gentisate 1,2-dioxygenase YP_001584415.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1890 transcriptional regulator, LysR family YP_001584416.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_3553 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001584417.1 PFAM: ferredoxin; KEGG: bur:Bcep18194_B1892 ferredoxin YP_001584418.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: bam:Bamb_3551 FAD dependent oxidoreductase YP_001584419.1 PFAM: proline racemase; KEGG: bur:Bcep18194_B1894 proline racemase YP_001584420.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1896 amino acid transporter YP_001584421.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_3548 aldehyde dehydrogenase YP_001584422.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bch:Bcen2424_4136 malate/L-lactate dehydrogenase YP_001584423.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001584424.1 KEGG: bvi:Bcep1808_4727 hypothetical protein YP_001584425.1 KEGG: bvi:Bcep1808_4727 hypothetical protein YP_001584426.1 KEGG: bch:Bcen2424_5666 hypothetical protein YP_001584427.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_6205 integrase, catalytic region YP_001584428.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001584429.1 PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; KEGG: bam:Bamb_3545 SH3, type 3 domain protein YP_001584430.1 KEGG: bch:Bcen2424_4133 hypothetical protein YP_001584431.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: bam:Bamb_3543 RNA polymerase, sigma 38 subunit, RpoS YP_001584432.1 SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: bam:Bamb_3542 helix-hairpin-helix DNA-binding, class 1 YP_001584433.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bam:Bamb_3541 transcriptional regulator, MerR family YP_001584434.1 KEGG: bch:Bcen2424_4129 hypothetical protein YP_001584435.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_4128 transcriptional regulator, MarR family YP_001584436.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4127 drug resistance transporter, EmrB/QacA subfamily YP_001584437.1 KEGG: bam:Bamb_3540 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferases; PFAM: acetyl-CoA hydrolase/transferase YP_001584438.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_B1910 CDP-alcohol phosphatidyltransferase YP_001584439.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bam:Bamb_3538 2OG-Fe(II) oxygenase YP_001584440.1 TIGRFAM: membrane protein; KEGG: bch:Bcen2424_4123 hypothetical protein YP_001584441.1 KEGG: bch:Bcen2424_4122 sugar nucleotidyltransferases-like protein YP_001584442.1 TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bvi:Bcep1808_4687 phosphoenolpyruvate phosphomutase YP_001584443.1 TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bam:Bamb_3534 thiamine pyrophosphate enzyme domain protein TPP-binding YP_001584444.1 TIGRFAM: 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bch:Bcen2424_4119 aminotransferase, class V YP_001584445.1 KEGG: bvi:Bcep1808_4676 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_001584446.1 KEGG: bur:Bcep18194_B1930 hypothetical protein YP_001584447.1 KEGG: esa:ESA_03519 hypothetical protein YP_001584448.1 PFAM: pili assembly chaperone; KEGG: bch:Bcen2424_1754 pili assembly chaperone YP_001584450.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bam:Bamb_1679 fimbrial biogenesis outer membrane usher protein YP_001584451.1 KEGG: bur:Bcep18194_B1938 hypothetical protein YP_001584452.1 KEGG: bch:Bcen2424_4105 hypothetical protein YP_001584453.1 KEGG: bch:Bcen2424_4104 hypothetical protein YP_001584454.1 PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B1941 polysaccharide deacetylase YP_001584455.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein YP_001584456.1 KEGG: bvi:Bcep1808_4661 hypothetical protein YP_001584457.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bch:Bcen2424_4100 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_001584458.1 KEGG: bam:Bamb_3510 hypothetical protein YP_001584459.1 KEGG: rme:Rmet_4616 hypothetical protein YP_001584460.1 PFAM: cytochrome c class I; KEGG: bam:Bamb_3509 cytochrome c, class I YP_001584461.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001584462.1 KEGG: bam:Bamb_3507 hypothetical protein YP_001584463.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1950 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001584464.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4094 transcriptional regulator, LysR family YP_001584465.1 KEGG: bch:Bcen2424_4093 hypothetical protein YP_001584466.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bam:Bamb_3501 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001584467.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_3500 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001584468.1 KEGG: bur:Bcep18194_B1955 hypothetical protein YP_001584469.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bch:Bcen2424_4088 aspartyl/asparaginyl beta-hydroxylase YP_001584470.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bch:Bcen2424_4087 carboxymuconolactone decarboxylase YP_001584471.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B1957 hypothetical protein YP_001584472.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bur:Bcep18194_B1958 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase YP_001584473.1 KEGG: bch:Bcen2424_4084 ABC transporter related YP_001584474.1 KEGG: bam:Bamb_3491 membrane protein-like protein YP_001584475.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001584476.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001584477.1 PFAM: response regulator receiver; KEGG: bvi:Bcep1808_4641 response regulator receiver protein YP_001584478.1 KEGG: bur:Bcep18194_B1976 hypothetical protein YP_001584479.1 KEGG: bam:Bamb_3464 hypothetical protein YP_001584480.1 PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1978 methyl-accepting chemotaxis sensory transducer YP_001584481.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: PAC repeat-containing protein; KEGG: bam:Bamb_3462 CheA signal transduction histidine kinases YP_001584482.1 PFAM: phospholipase/Carboxylesterase; KEGG: bur:Bcep18194_B1982 phospholipase/carboxylesterase YP_001584483.1 TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1988 aldehyde dehydrogenase YP_001584484.1 KEGG: bur:Bcep18194_B1989 hypothetical protein YP_001584485.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B1990 transcriptional regulator, GntR family with aminotransferase activity YP_001584486.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B1992 hypothetical protein YP_001584487.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source YP_001584488.1 KEGG: bur:Bcep18194_B1994 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_001584489.1 PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B1995 protein of unknown function DUF81 YP_001584490.1 KEGG: bur:Bcep18194_B1996 cobalamin biosynthesis protein CobT YP_001584491.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bur:Bcep18194_B1997 ATPase AAA_3 YP_001584492.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B1998 transcriptional regulator, IclR family YP_001584493.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: bur:Bcep18194_B1999 DMSO reductase anchor subunit (DmsC) YP_001584494.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_B2000 4Fe-4S ferredoxin YP_001584495.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_B2001 molybdopterin oxidoreductase YP_001584496.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2002 amino acid transporter YP_001584497.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2003 FAD dependent oxidoreductase YP_001584498.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2004 major facilitator superfamily (MFS_1) transporter YP_001584499.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_B2005 glucose-methanol-choline oxidoreductase YP_001584500.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bur:Bcep18194_B2006 transcriptional regulator, IclR family YP_001584501.1 KEGG: bch:Bcen2424_4061 hypothetical protein YP_001584502.1 PFAM: protein of unknown function DUF979; KEGG: bam:Bamb_3453 protein of unknown function DUF979 YP_001584503.1 PFAM: protein of unknown function DUF969; KEGG: bam:Bamb_3452 protein of unknown function DUF969 YP_001584504.1 KEGG: bvi:Bcep1808_4626 hypothetical protein YP_001584505.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001584506.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: bur:Bcep18194_B2018 diguanylate cyclase (GGDEF domain) YP_001584507.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold domain protein; KEGG: bur:Bcep18194_B2019 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF sensor YP_001584508.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6377 short-chain dehydrogenase/reductase SDR YP_001584509.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6918 transcriptional regulator, AraC family YP_001584510.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bch:Bcen2424_4051 haloacid dehalogenase, type II YP_001584511.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4049 transcriptional regulator, LysR family YP_001584512.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2032 major facilitator superfamily (MFS_1) transporter YP_001584513.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4047 methylmalonate-semialdehyde dehydrogenase YP_001584514.1 KEGG: bam:Bamb_3441 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_001584515.1 KEGG: bch:Bcen2424_4045 hypothetical protein YP_001584516.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4044 cytochrome c, class I YP_001584517.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_4043 (2Fe-2S)-binding domain protein YP_001584518.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bch:Bcen2424_4042 salicylate 1-monooxygenase YP_001584519.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bch:Bcen2424_4041 Asp/Glu racemase YP_001584520.1 PFAM: alpha/beta hydrolase fold; KEGG: bch:Bcen2424_4040 alpha/beta hydrolase fold YP_001584521.1 KEGG: bcn:Bcen_4327 hypothetical protein YP_001584522.1 PFAM: isochorismatase hydrolase; KEGG: bch:Bcen2424_4038 isochorismatase hydrolase YP_001584523.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bch:Bcen2424_4037 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001584524.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_4036 transcriptional regulator, MarR family YP_001584525.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4034 major facilitator superfamily MFS_1 YP_001584526.1 KEGG: bvi:Bcep1808_4616 hypothetical protein YP_001584527.1 KEGG: bch:Bcen2424_4032 hypothetical protein YP_001584528.1 KEGG: bch:Bcen2424_4031 hypothetical protein YP_001584529.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2041 transcriptional regulator, LysR family YP_001584530.1 PFAM: Auxin Efflux Carrier; KEGG: bur:Bcep18194_B2042 auxin efflux carrier YP_001584531.1 KEGG: bam:Bamb_3433 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001584532.1 KEGG: bam:Bamb_3432 hypothetical protein YP_001584533.1 KEGG: bur:Bcep18194_B2061 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001584534.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_4021 binding-protein-dependent transport systems inner membrane component YP_001584535.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2063 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001584536.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2064 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001584537.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2065 taurine dioxygenase YP_001584538.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2066 taurine dioxygenase YP_001584539.1 PFAM: extracellular solute-binding protein family 5; KEGG: bur:Bcep18194_B2067 ABC peptide transporter, periplasmic ligand binding protein YP_001584540.1 PFAM: protein of unknown function DUF427; KEGG: bvi:Bcep1808_4606 protein of unknown function DUF427 YP_001584541.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2069 ABC transporter, substrate-binding protein, aliphatic sulphonates YP_001584542.1 PFAM: protein of unknown function DUF1089; KEGG: bam:Bamb_3413 protein of unknown function DUF1089 YP_001584543.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2076 major facilitator superfamily (MFS_1) transporter YP_001584544.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bam:Bamb_3412 alcohol dehydrogenase YP_001584545.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bch:Bcen2424_4005 antibiotic biosynthesis monooxygenase YP_001584546.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: bur:Bcep18194_B2079 glycerol-3-phosphate responsive antiterminator (mRNA-binding)-like YP_001584547.1 PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_B2080 FAD linked oxidase-like YP_001584548.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2081 FAD dependent oxidoreductase YP_001584549.1 PFAM: carbohydrate kinase FGGY; KEGG: bur:Bcep18194_B2082 glycerol kinase YP_001584550.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2083 major facilitator superfamily (MFS_1) transporter YP_001584551.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bch:Bcen2424_4002 uracil-xanthine permease YP_001584552.1 KEGG: bch:Bcen2424_6255 hypothetical protein YP_001584553.1 KEGG: bch:Bcen2424_6697 hypothetical protein YP_001584554.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001584555.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_5603 regulatory protein, LacI YP_001584556.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5604 major facilitator superfamily MFS_1 YP_001584557.1 PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2517 regulator of purine biosynthesis YP_001584558.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2516 transcriptional regulator, LysR-family YP_001584559.1 PFAM: protein of unknown function DUF72; KEGG: bxe:Bxe_B2045 hypothetical protein YP_001584560.1 KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001584561.1 PFAM: Patatin; KEGG: bxe:Bxe_A3155 transmembrane protein, patatin-like phospholipase domain YP_001584562.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bch:Bcen2424_3989 selenocysteine-specific translation elongation factor YP_001584563.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_001584564.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bam:Bamb_3380 formate dehydrogenase accessory protein FdhE YP_001584565.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bam:Bamb_3379 formate dehydrogenase, gamma subunit YP_001584566.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bch:Bcen2424_3985 formate dehydrogenase, beta subunit YP_001584567.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bvi:Bcep1808_4486 formate dehydrogenase, alpha subunit YP_001584568.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bch:Bcen2424_3983 molybdopterin oxidoreductase Fe4s4 region YP_001584569.1 PFAM: ribonuclease BN; KEGG: bvi:Bcep1808_4484 ribonuclease BN YP_001584570.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B2103 outer membrane protein (porin) YP_001584571.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bvi:Bcep1808_4482 3-demethylubiquinone-9 3-methyltransferase YP_001584572.1 PFAM: histone family protein DNA-binding protein; KEGG: bte:BTH_II0701 DNA-binding protein BpH2 YP_001584573.1 KEGG: bam:Bamb_3370 acyltransferase family protein YP_001584574.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2107 acyltransferase 3 YP_001584575.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bch:Bcen2424_3977 UTP-glucose-1-phosphate uridylyltransferase YP_001584576.1 KEGG: bch:Bcen2424_3976 hypothetical protein YP_001584577.1 PFAM: acyltransferase 3; KEGG: bvi:Bcep1808_4477 acyltransferase 3 YP_001584578.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_3364 glycosyl transferase, group 1 YP_001584579.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_B2112 polysaccharide biosynthesis protein YP_001584580.1 KEGG: bam:Bamb_3361 hypothetical protein YP_001584581.1 PFAM: acyltransferase 3; KEGG: bam:Bamb_3359 acyltransferase 3 YP_001584582.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bch:Bcen2424_3970 GDP-mannose 4,6-dehydratase YP_001584583.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_B2116 NAD-dependent epimerase/dehydratase YP_001584584.1 catalyzes the conversion of O-succinylhomoserine into homocysteine YP_001584585.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001584586.1 PFAM: Colicin V production protein; KEGG: bch:Bcen2424_3964 colicin V production protein YP_001584587.1 PFAM: Sporulation domain protein; KEGG: bch:Bcen2424_3963 sporulation domain protein YP_001584588.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: bvi:Bcep1808_4466 FolC bifunctional protein YP_001584589.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits YP_001584590.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001584591.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bvi:Bcep1808_4463 DNA methylase N-4/N-6 domain protein YP_001584592.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001584593.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_001584594.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001584595.1 KEGG: bch:Bcen2424_3955 hypothetical protein YP_001584596.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_001584597.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001584598.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001584599.1 PFAM: Entericidin EcnAB; KEGG: bch:Bcen2424_3950 entericidin EcnAB YP_001584600.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001584601.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: cvi:CV_3526 hypothetical protein YP_001584602.1 PFAM: phosphoesterase; KEGG: art:Arth_4378 phosphoesterase YP_001584603.1 KEGG: bur:Bcep18194_B2134 hypothetical protein YP_001584604.1 KEGG: bur:Bcep18194_B2135 hypothetical protein YP_001584606.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_3323 glutathione S-transferase, C-terminal domain YP_001584607.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2141 amino acid transporter YP_001584608.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_3944 transcriptional regulator, AsnC family YP_001584609.1 PFAM: amidinotransferase; KEGG: bam:Bamb_3320 dimethylargininase YP_001584610.1 PFAM: protein of unknown function DUF1479; KEGG: bch:Bcen2424_3942 protein of unknown function DUF1479 YP_001584611.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_4417 glyoxalase/bleomycin resistance protein/dioxygenase YP_001584612.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_3317 transcriptional regulator, AraC family YP_001584613.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_001584614.1 PFAM: protein of unknown function DUF339; KEGG: bur:Bcep18194_B2148 protein of unknown function DUF339 YP_001584615.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001584616.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001584617.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bvi:Bcep1808_4411 succinate dehydrogenase, cytochrome b subunit YP_001584618.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bch:Bcen2424_3934 succinate dehydrogenase, cytochrome b subunit YP_001584619.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bam:Bamb_3310 transcriptional regulator, GntR family YP_001584620.1 catalyzes the oxidation of malate to oxaloacetate YP_001584621.1 PFAM: HpcH/HpaI aldolase; KEGG: bam:Bamb_3308 HpcH/HpaI aldolase YP_001584622.1 KEGG: bvi:Bcep1808_4406 hypothetical protein YP_001584623.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C YP_001584624.1 catalyzes the conversion of citrate to isocitrate YP_001584625.1 PFAM: Domain of unknown function DUF1801; KEGG: bvi:Bcep1808_4403 hypothetical protein YP_001584626.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bur:Bcep18194_B2160 hypothetical protein YP_001584627.1 PFAM: regulatory protein ArsR; KEGG: bch:Bcen2424_3925 transcriptional regulator, ArsR family YP_001584629.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bvi:Bcep1808_4399 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001584630.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2166 major facilitator superfamily (MFS_1) transporter YP_001584631.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3299 binding-protein-dependent transport systems inner membrane component YP_001584632.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3920 binding-protein-dependent transport systems inner membrane component YP_001584633.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_3297 extracellular solute-binding protein, family 1 YP_001584634.1 KEGG: bur:Bcep18194_B2170 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001584635.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_B2171 transcriptional regulator, GntR family with aminotransferase activity YP_001584636.1 acts as a molecular chaperone to fold and export lipase A YP_001584637.1 PFAM: alpha/beta hydrolase fold; Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: bam:Bamb_3293 triacylglycerol lipase YP_001584638.1 TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_3292 TonB-dependent copper receptor YP_001584639.1 KEGG: bur:Bcep18194_B2175 hypothetical protein YP_001584640.1 PFAM: cytochrome B561; KEGG: bur:Bcep18194_B2176 cytochrome b561 YP_001584641.1 KEGG: bch:Bcen2424_3911 hypothetical protein YP_001584642.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bch:Bcen2424_3910 peptidase M23B YP_001584643.1 KEGG: bch:Bcen2424_3909 hypothetical protein YP_001584644.1 KEGG: bch:Bcen2424_3908 hypothetical protein YP_001584645.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_001584646.1 PFAM: protein of unknown function DUF938; Methyltransferase type 11; KEGG: bur:Bcep18194_B2182 protein of unknown function DUF938 YP_001584647.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_001584648.1 PFAM: luciferase family protein; KEGG: bch:Bcen2424_3904 luciferase family protein YP_001584649.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bch:Bcen2424_3903 MscS mechanosensitive ion channel YP_001584650.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: bch:Bcen2424_3902 transcriptional regulator, TetR family YP_001584651.1 PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_3901 secretion protein HlyD family protein YP_001584652.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_3275 drug resistance transporter, EmrB/QacA subfamily YP_001584653.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2193 RND efflux system, outer membrane lipoprotein, NodT family YP_001584654.1 KEGG: bam:Bamb_3406 hypothetical protein YP_001584655.1 KEGG: bam:Bamb_3405 hypothetical protein YP_001584657.1 KEGG: bch:Bcen2424_4661 hypothetical protein YP_001584658.1 PFAM: regulatory protein TetR; KEGG: rle:RL2980 TetR family transcriptional regulator YP_001584659.1 PFAM: O-methyltransferase family 3; KEGG: rle:RL2981 methyltransferase YP_001584660.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2482 zinc-containing dehydrogenase YP_001584661.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: xcb:XC_2803 photolyase-like protein YP_001584663.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B1598 diguanylate cyclase (GGDEF domain) YP_001584664.1 KEGG: ana:all0182 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001584665.1 PFAM: CheB methylesterase; MCP methyltransferase CheR-type; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: ade:Adeh_3183 signal transduction histidine kinase YP_001584666.1 PFAM: amidohydrolase 2; KEGG: bch:Bcen2424_5389 amidohydrolase 2 YP_001584667.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5390 major facilitator superfamily MFS_1 YP_001584668.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5391 major facilitator superfamily MFS_1 YP_001584669.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5392 major facilitator superfamily MFS_1 YP_001584670.1 PFAM: amidohydrolase 2; KEGG: bch:Bcen2424_5393 amidohydrolase 2 YP_001584671.1 PFAM: porin Gram-negative type; KEGG: bch:Bcen2424_5394 porin, gram-negative type YP_001584672.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5395 major facilitator superfamily MFS_1 YP_001584673.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bch:Bcen2424_5396 SMP-30/gluconolaconase/LRE domain protein YP_001584674.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bch:Bcen2424_5397 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001584675.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bch:Bcen2424_5398 dimethylmenaquinone methyltransferase YP_001584676.1 PFAM: regulatory protein IclR; KEGG: bch:Bcen2424_5399 transcriptional regulator, IclR family YP_001584677.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; peptidase C14 caspase catalytic subunit p20; SMART: DEAD-like helicases; KEGG: bvi:Bcep1808_4371 DEAD/DEAH box helicase domain protein YP_001584678.1 KEGG: bvi:Bcep1808_4370 hypothetical protein YP_001584679.1 KEGG: bvi:Bcep1808_4369 hypothetical protein YP_001584680.1 KEGG: bvi:Bcep1808_4366 hypothetical protein YP_001584681.1 KEGG: bvi:Bcep1808_4365 hypothetical protein YP_001584682.1 KEGG: bvi:Bcep1808_4364 hypothetical protein YP_001584683.1 KEGG: bvi:Bcep1808_4362 hypothetical protein YP_001584684.1 KEGG: bvi:Bcep1808_4361 hypothetical protein YP_001584685.1 SMART: AAA ATPase; KEGG: bvi:Bcep1808_4343 AAA ATPase YP_001584686.1 KEGG: bvi:Bcep1808_4357 hypothetical protein YP_001584687.1 KEGG: bvi:Bcep1808_4356 hypothetical protein YP_001584688.1 PFAM: Integrase catalytic region; KEGG: bps:BPSL3117 insertion element hypothetical protein YP_001584689.1 PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7153 transposase IS3/IS911 family protein YP_001584690.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4354 IstB domain protein ATP-binding protein YP_001584691.1 KEGG: bxe:Bxe_A3740 transposase YP_001584692.1 KEGG: eba:ebA2494 hypothetical protein YP_001584693.1 KEGG: art:Arth_4317 hypothetical protein YP_001584694.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_4271 transposase, mutator type YP_001584695.1 KEGG: bvi:Bcep1808_4350 hypothetical protein YP_001584696.1 PFAM: Gp37Gp68 family protein; KEGG: bvi:Bcep1808_4349 phage Gp37Gp68 family protein YP_001584697.1 KEGG: bvi:Bcep1808_4348 hypothetical protein YP_001584698.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001584699.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_7618 IstB domain protein ATP-binding protein YP_001584700.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0125 integrase, catalytic region YP_001584701.1 KEGG: bxe:Bxe_B0126 transposase-associated ATP-binding protein YP_001584702.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001584703.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bxe:Bxe_B0126 transposase-associated ATP-binding protein YP_001584704.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001584705.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001584706.1 KEGG: bvi:Bcep1808_4346 hypothetical protein YP_001584707.1 KEGG: bvi:Bcep1808_4345 hypothetical protein YP_001584708.1 PFAM: Integrase catalytic region; TnsA endonuclease; KEGG: bvi:Bcep1808_4344 integrase, catalytic region YP_001584709.1 SMART: AAA ATPase; KEGG: bvi:Bcep1808_4343 AAA ATPase YP_001584710.1 KEGG: bvi:Bcep1808_4342 hypothetical protein YP_001584711.1 KEGG: bvi:Bcep1808_4341 hypothetical protein YP_001584712.1 PFAM: transposase IS66; KEGG: bvi:Bcep1808_4340 transposase IS66 YP_001584713.1 PFAM: IS66 Orf2 family protein; KEGG: bvi:Bcep1808_4339 IS66 Orf2 family protein YP_001584714.1 KEGG: bvi:Bcep1808_4338 Piwi domain protein YP_001584715.1 PFAM: amino acid permease-associated region; KEGG: bvi:Bcep1808_4336 amino acid permease-associated region YP_001584716.1 PFAM: NHL repeat containing protein; KEGG: bvi:Bcep1808_4335 NHL repeat containing protein YP_001584717.1 KEGG: bvi:Bcep1808_4334 hypothetical protein YP_001584718.1 PFAM: Amidase; KEGG: bvi:Bcep1808_4333 amidase YP_001584719.1 KEGG: acr:Acry_2368 ABC transporter related YP_001584720.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4331 ABC transporter related YP_001584721.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4330 ABC transporter related YP_001584722.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_4329 inner-membrane translocator YP_001584723.1 PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_4328 inner-membrane translocator YP_001584724.1 PFAM: Extracellular ligand-binding receptor; KEGG: bvi:Bcep1808_4327 extracellular ligand-binding receptor YP_001584725.1 PFAM: NHL repeat containing protein; KEGG: bvi:Bcep1808_4326 NHL repeat containing protein YP_001584726.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001584727.1 KEGG: bvi:Bcep1808_4326 NHL repeat containing protein YP_001584728.1 KEGG: bvi:Bcep1808_4325 hypothetical protein YP_001584729.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4324 transcriptional regulator, LysR family YP_001584730.1 PFAM: NHL repeat containing protein; KEGG: bvi:Bcep1808_4323 NHL repeat containing protein YP_001584731.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4322 major facilitator superfamily MFS_1 YP_001584732.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_4321 porin, gram-negative type YP_001584733.1 PFAM: peptidase M24; KEGG: bvi:Bcep1808_4320 peptidase M24 YP_001584734.1 KEGG: bvi:Bcep1808_4319 hypothetical protein YP_001584735.1 KEGG: bvi:Bcep1808_4318 phage-related membrane protein YP_001584736.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_4317 transposase IS116/IS110/IS902 family protein YP_001584737.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001584738.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_7290 transposase IS116/IS110/IS902 family protein YP_001584739.1 KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001584740.1 PFAM: Integrase catalytic region; KEGG: bja:bll1855 transposase YP_001584741.1 KEGG: bvi:Bcep1808_3823 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001584742.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bvi:Bcep1808_4309 methyl-accepting chemotaxis sensory transducer YP_001584743.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4308 D-galactonate transporter YP_001584744.1 KEGG: bvi:Bcep1808_4307 4,5-dihydroxyphthalate decarboxylase YP_001584745.1 PFAM: Aldehyde Dehydrogenase; KEGG: bvi:Bcep1808_4306 betaine-aldehyde dehydrogenase YP_001584746.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bvi:Bcep1808_4305 thiamine pyrophosphate enzyme TPP binding domain protein YP_001584747.1 KEGG: bvi:Bcep1808_4300 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_001584748.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_4299 binding-protein-dependent transport systems inner membrane component YP_001584749.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4298 ABC transporter related YP_001584750.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_4297 porin, gram-negative type YP_001584751.1 KEGG: bvi:Bcep1808_4296 transcriptional regulator, MarR family YP_001584752.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_4271 transposase, mutator type YP_001584753.1 KEGG: bur:Bcep18194_C7282 outer membrane protein (porin) YP_001584754.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4287 IstB domain protein ATP-binding protein YP_001584755.1 KEGG: reh:H16_A1551 outer membrane protein (porin) YP_001584756.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS03073 probable transcription regulator protein YP_001584757.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bvi:Bcep1808_4283 cupin 2, conserved barrel domain protein YP_001584758.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bvi:Bcep1808_4282 4-oxalocrotonate tautomerase YP_001584759.1 KEGG: bvi:Bcep1808_4281 major facilitator superfamily MFS_1 YP_001584760.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1794 transposase-related ATP-binding subunit YP_001584761.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001584762.1 KEGG: bvi:Bcep1808_4281 major facilitator superfamily MFS_1 YP_001584763.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4280 transcriptional regulator, LysR family YP_001584764.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4279 major facilitator superfamily MFS_1 YP_001584765.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_4278 alcohol dehydrogenase, zinc-binding domain protein YP_001584766.1 PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_4277 aldo/keto reductase YP_001584767.1 TIGRFAM: hemerythrin-like metal-binding protein; KEGG: bvi:Bcep1808_4274 hemerythrin-like metal-binding protein YP_001584768.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bvi:Bcep1808_4273 Rieske (2Fe-2S) domain protein YP_001584769.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bvi:Bcep1808_4272 oxidoreductase domain protein YP_001584770.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_4271 transposase, mutator type YP_001584771.1 KEGG: bvi:Bcep1808_4270 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_001584772.1 PFAM: regulatory protein MarR; KEGG: bvi:Bcep1808_4269 transcriptional regulator, MarR family YP_001584773.1 KEGG: bvi:Bcep1808_4268 4,5-dihydroxyphthalate decarboxylase YP_001584774.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4267 D-galactonate transporter YP_001584775.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bvi:Bcep1808_4266 ferredoxin YP_001584776.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria YP_001584777.1 synthesizes RNA primers at the replication forks YP_001584778.1 KEGG: bam:Bamb_3255 GatB/YqeY domain protein YP_001584779.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001584780.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_3882 HI0933 family protein YP_001584781.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001584782.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_001584783.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001584784.1 PFAM: Polyprenyl synthetase; KEGG: bvi:Bcep1808_4256 polyprenyl synthetase YP_001584785.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_001584786.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B2214 Rieske (2Fe-2S) protein YP_001584787.1 PFAM: Rhodanese domain protein; KEGG: bur:Bcep18194_B2215 3-mercaptopyruvate sulfurtransferase YP_001584788.1 PFAM: dienelactone hydrolase; KEGG: bch:Bcen2424_3874 carboxymethylenebutenolidase YP_001584789.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_3873 NADH dehydrogenase YP_001584790.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair YP_001584791.1 PFAM: conserved hypothetical protein; KEGG: bch:Bcen2424_3871 conserved hypothetical protein 730 YP_001584792.1 KEGG: bch:Bcen2424_3870 hypothetical protein YP_001584793.1 PFAM: protein of unknown function DUF523; KEGG: bpd:BURPS668_A2552 hypothetical protein YP_001584794.1 KEGG: bcy:Bcer98_3073 hypothetical protein YP_001584795.1 PFAM: helix-turn-helix domain protein; KEGG: ana:all2962 transcriptional regulator YP_001584796.1 KEGG: ppr:PBPRB0558 hypothetical protein YP_001584797.1 TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: rso:RSc1941 probable bacteriophage protein YP_001584798.1 PFAM: protein of unknown function DUF264; terminase ATPase subunit; KEGG: sty:STY4627 probable terminase subunit YP_001584799.1 PFAM: capsid scaffolding; KEGG: yps:YPTB1761 similar to V protein bacteriophage 186 YP_001584800.1 TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; KEGG: csa:Csal_1397 phage major capsid protein, P2 YP_001584801.1 PFAM: small terminase subunit; KEGG: rso:RSc1936 probable bacteriophage protein YP_001584802.1 PFAM: head completion protein; KEGG: yen:YE1674 phage head completion/stabilization protein YP_001584803.1 KEGG: bte:BTH_II1347 hypothetical protein YP_001584804.1 PFAM: tail X family protein; KEGG: spt:SPA2577 phage tail protein YP_001584805.1 KEGG: rso:RSc1933 probable phage-related transmembrane protein YP_001584806.1 PFAM: protein of unknown function DUF754; KEGG: rso:RSc1932 phage-related transmembrane protein YP_001584807.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bps:BPSS1072 bacteriophage-acquired protein YP_001584808.1 KEGG: xoo:XOO1704 hypothetical protein YP_001584809.1 PFAM: P2 phage tail completion R family protein; KEGG: rso:RSc1929 probable tail completion-like protein YP_001584810.1 TIGRFAM: phage virion morphogenesis protein; PFAM: virion morphogenesis ( tail completion) protein; KEGG: rso:RSc1928 probable tail completion-like protein YP_001584811.1 KEGG: rme:Rmet_4641 ATP-dependent endonuclease of the OLD family-like protein YP_001584812.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: rso:RSc1925 probable phage-related protein (baseplate assembly-like protein) YP_001584813.1 PFAM: GPW/gp25 family protein; KEGG: rso:RSc1924 probable phage-related protein (baseplate assembly-like protein) YP_001584814.1 PFAM: Baseplate J family protein; KEGG: bte:BTH_II1335 baseplate J-like protein YP_001584815.1 TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: bte:BTH_II1334 phage-related tail protein YP_001584816.1 KEGG: bte:BTH_II1333 phage-related tail fiber protein YP_001584817.1 PFAM: tail assembly chaperone gp38; KEGG: bte:BTH_II1332 tail fiber assembly protein from lambdoid prophage E14 YP_001584818.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bps:BPSS1077 site-specific DNA methyltransferase YP_001584819.1 PFAM: tail sheath protein; KEGG: rso:RSc1918 probable phage-related protein (tail sheath-like protein) YP_001584820.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: rso:RSc1917 probable phage-related protein (major tail tube-like protein) YP_001584821.1 PFAM: tail E family protein; KEGG: rso:RSc1916 probable phage-related protein YP_001584822.1 PFAM: P2 GpE family protein; KEGG: pna:Pnap_3312 phage P2 GpE family protein YP_001584823.1 KEGG: bte:BTH_II1327 probable phage-related tail transmembrane protein YP_001584824.1 PFAM: P2 GpU family protein; KEGG: rso:RSc1913 probable phage-related tail protein YP_001584825.1 PFAM: late control D family protein; KEGG: ecc:c0978 regulator of late gene expression YP_001584826.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001584828.1 KEGG: bps:BPSL0142 phage-encoded membrane protein YP_001584829.1 SMART: helix-turn-helix domain protein; KEGG: bps:BPSL0141 phage DNA-binding protein YP_001584830.1 KEGG: bps:BPSL0139 phage DNA-binding protein YP_001584831.1 PFAM: transcriptional activator Ogr/delta; KEGG: rso:RSc1904 transcriptional activator transcription regulator protein YP_001584833.1 KEGG: bps:BPSL0135 hypothetical protein YP_001584834.1 KEGG: bps:BPSL0134 phage-encoded membrane protein YP_001584835.1 KEGG: bps:BPSL0131 hypothetical protein YP_001584836.1 KEGG: bps:BPSL0130a hypothetical protein YP_001584837.1 PFAM: zinc finger CHC2-family protein; KEGG: bps:BPSL0130 hypothetical protein YP_001584838.1 PFAM: integrase family protein; KEGG: bpl:BURPS1106A_A2415 site-specific recombinase, phage integrase family YP_001584839.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_001584840.1 KEGG: bur:Bcep18194_B2228 hypothetical protein YP_001584841.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine YP_001584842.1 KEGG: bch:Bcen2424_3866 hypothetical protein YP_001584843.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_3865 transcriptional regulator, MarR family YP_001584844.1 PFAM: OsmC family protein; KEGG: bam:Bamb_3232 OsmC family protein YP_001584845.1 KEGG: bam:Bamb_3231 hypothetical protein YP_001584846.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: bam:Bamb_3230 esterase, PHB depolymerase family YP_001584847.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bch:Bcen2424_3861 phosphoesterase, PA-phosphatase related YP_001584848.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_3860 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001584849.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3227 molybdate ABC transporter, inner membrane subunit YP_001584850.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_3858 ABC transporter related YP_001584851.1 PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bch:Bcen2424_3857 transcriptional regulator, ModE family YP_001584852.1 PFAM: CHAD domain containing protein; KEGG: bur:Bcep18194_B2240 conserved hypothetical protein, CHAD family YP_001584853.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bam:Bamb_3223 4-oxalocrotonate tautomerase YP_001584854.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3222 transcriptional regulator, LysR family YP_001584855.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bch:Bcen2424_3853 protein of unknown function DUF6, transmembrane YP_001584856.1 PFAM: histidine kinase A domain protein; KEGG: bur:Bcep18194_B2244 histidine kinase YP_001584857.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bur:Bcep18194_B2245 hypothetical protein YP_001584858.1 PFAM: thiamine monophosphate synthase; KEGG: bur:Bcep18194_B2246 thiamine monophosphate synthase YP_001584859.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: bur:Bcep18194_B2247 glycoside hydrolase, family 13-like YP_001584860.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_3848 methyltransferase type 11 YP_001584861.1 PFAM: protein of unknown function DUF1345; KEGG: bam:Bamb_5569 protein of unknown function DUF1345 YP_001584862.1 PFAM: metallophosphoesterase; KEGG: bch:Bcen2424_3845 metallophosphoesterase YP_001584863.1 PFAM: RES domain protein; KEGG: bch:Bcen2424_3844 hypothetical protein YP_001584864.1 KEGG: bch:Bcen2424_3843 hypothetical protein YP_001584865.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_4219 cationic amino acid ABC transporter, periplasmic binding protein YP_001584866.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bcn:Bcen_4525 sigma54 specific transcriptional regulator, fis family YP_001584867.1 KEGG: bch:Bcen2424_3837 metal-dependent hydrolase-like protein YP_001584868.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bch:Bcen2424_3836 peptidylprolyl isomerase YP_001584869.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5558 transcriptional regulator, AraC family YP_001584870.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2263 major facilitator superfamily (MFS_1) transporter YP_001584871.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B2265 transcriptional regulator YP_001584872.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3830 major facilitator superfamily MFS_1 YP_001584873.1 PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_3829 glycosyl transferase, group 1 YP_001584874.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_5554 glycosyl transferase, group 1 YP_001584875.1 KEGG: bch:Bcen2424_3827 hypothetical protein YP_001584876.1 KEGG: bur:Bcep18194_B2270 glycosyltransferase-like YP_001584877.1 PFAM: glycosyl transferase family 2; KEGG: bch:Bcen2424_3825 glycosyl transferase, family 2 YP_001584878.1 KEGG: bur:Bcep18194_B2272 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_001584879.1 PFAM: polysaccharide export protein; KEGG: bvi:Bcep1808_4204 polysaccharide export protein YP_001584880.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bvi:Bcep1808_4203 protein tyrosine phosphatase YP_001584881.1 KEGG: bch:Bcen2424_3821 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001584882.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bam:Bamb_5546 sugar transferase YP_001584883.1 KEGG: bam:Bamb_5545 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001584884.1 KEGG: bam:Bamb_5544 hypothetical protein YP_001584885.1 KEGG: bur:Bcep18194_B2279 hypothetical protein YP_001584886.1 KEGG: bch:Bcen2424_3816 Fe-S oxidoreductase-like protein YP_001584887.1 PFAM: Rubrerythrin; KEGG: bch:Bcen2424_3815 rubrerythrin YP_001584888.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bch:Bcen2424_3814 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001584889.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_5539 glyoxalase/bleomycin resistance protein/dioxygenase YP_001584890.1 PFAM: DGPFAETKE family protein; KEGG: bam:Bamb_5538 DGPFAETKE family protein YP_001584891.1 PFAM: DGPFAETKE family protein; KEGG: bur:Bcep18194_B2285 hypothetical protein YP_001584892.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bam:Bamb_5535 protein of unknown function DUF883, ElaB YP_001584893.1 KEGG: bvi:Bcep1808_4191 hypothetical protein YP_001584894.1 PFAM: protein of unknown function UPF0118; KEGG: bvi:Bcep1808_4190 protein of unknown function UPF0118 YP_001584895.1 KEGG: bur:Bcep18194_B2290 hypothetical protein YP_001584896.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5530 short-chain dehydrogenase/reductase SDR YP_001584897.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bam:Bamb_5529 phosphoesterase, PA-phosphatase related YP_001584898.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B2294 Mn2+ and Fe2+ transporters of the NRAMP family YP_001584899.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_3801 transcriptional regulator, AraC family YP_001584900.1 PFAM: OsmC family protein; KEGG: bam:Bamb_5525 OsmC family protein YP_001584901.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_B2298 Dyp-type peroxidase YP_001584902.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2299 ABC efflux pump, fused ATPase and inner membrane subunits YP_001584903.1 PFAM: Chloride channel core; KEGG: bur:Bcep18194_B2302 Cl-channel, voltage gated YP_001584904.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001584905.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: bur:Bcep18194_B2304 CheA signal transduction histidine kinases YP_001584906.1 PFAM: CheW domain protein; KEGG: bam:Bamb_5516 CheW protein YP_001584907.1 CheR-type with Tpr repeats; KEGG: bch:Bcen2424_3788 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein YP_001584908.1 PFAM: CheW domain protein; KEGG: bur:Bcep18194_B2307 CheW protein YP_001584909.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bur:Bcep18194_B2308 methyl-accepting chemotaxis sensory transducer YP_001584910.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_5512 response regulator receiver sensor signal transduction histidine kinase YP_001584911.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bch:Bcen2424_3784 Na+/H+ antiporter YP_001584912.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5510 aldehyde dehydrogenase YP_001584913.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis YP_001584914.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: bam:Bamb_5508 protein of unknown function DUF891 YP_001584915.1 TIGRFAM: addiction module antidote protein; KEGG: bam:Bamb_5507 transcriptional regulator YP_001584916.1 PFAM: protein of unknown function DUF445; KEGG: bch:Bcen2424_3779 protein of unknown function DUF445 YP_001584917.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2322 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001584918.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_3777 Rieske (2Fe-2S) domain protein YP_001584919.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bam:Bamb_5503 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001584920.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bur:Bcep18194_B2325 ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein YP_001584921.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2326 transcriptional regulator, AraC family YP_001584922.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5500 transcriptional regulator, LysR family YP_001584923.1 TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_5499 muconate and chloromuconate cycloisomerases YP_001584924.1 TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bvi:Bcep1808_4158 catechol 1,2-dioxygenase YP_001584925.1 KEGG: bam:Bamb_5497 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_001584926.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bam:Bamb_5496 NAD(P)H dehydrogenase (quinone) YP_001584927.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3766 transcriptional regulator, LysR family YP_001584928.1 KEGG: bvi:Bcep1808_4154 hypothetical protein YP_001584929.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2335 NADH/flavin oxidoreductase/NADH oxidase YP_001584930.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5492 transcriptional regulator, AraC family YP_001584931.1 KEGG: bch:Bcen2424_3761 hypothetical protein YP_001584932.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B1023 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001584933.1 KEGG: bch:Bcen2424_3760 protein of unknown function DUF126 YP_001584934.1 PFAM: protein of unknown function DUF521; KEGG: bur:Bcep18194_B2340 protein of unknown function DUF521 YP_001584935.1 PFAM: regulatory protein MarR; KEGG: bam:Bamb_5489 transcriptional regulator, MarR family YP_001584936.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2342 transcriptional regulator, LysR family YP_001584937.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: bam:Bamb_5487 transcriptional regulator, MarR family YP_001584938.1 PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_3755 secretion protein HlyD family protein YP_001584939.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5485 drug resistance transporter, EmrB/QacA subfamily YP_001584940.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_5484 RND efflux system, outer membrane lipoprotein, NodT family YP_001584941.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2347 lysine exporter family protein (LysE/YggA) YP_001584942.1 KEGG: bam:Bamb_5483 hypothetical protein YP_001584943.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5623 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_001584944.1 PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_6664 extracellular solute-binding protein, family 1 YP_001584945.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5626 transcriptional regulator, LysR family YP_001584946.1 PFAM: AbgT transporter; KEGG: bam:Bamb_5844 hypothetical protein YP_001584947.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_4655 betaine-aldehyde dehydrogenase YP_001584948.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bam:Bamb_5846 6-phosphogluconate dehydrogenase, NAD-binding YP_001584949.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_4657 transcriptional regulator, LysR family YP_001584950.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6661 transcriptional regulator, LysR family YP_001584951.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4414 short-chain dehydrogenase/reductase SDR YP_001584952.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4413 major facilitator superfamily MFS_1 YP_001584953.1 PFAM: Transketolase domain protein; KEGG: bch:Bcen2424_6658 transketolase domain protein YP_001584954.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bch:Bcen2424_6657 transketolase, central region YP_001584955.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3743 transcriptional regulator, LysR family YP_001584956.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2353 major facilitator superfamily (MFS_1) transporter YP_001584957.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B2354 amidohydrolase YP_001584958.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1368 transcriptional regulator, LysR family YP_001584959.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bvi:Bcep1808_5033 lysine exporter protein (LysE/YggA) YP_001584960.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bcn:Bcen_4628 methyl-accepting chemotaxis sensory transducer YP_001584961.1 PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_5470 OmpA/MotB domain protein YP_001584962.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bvi:Bcep1808_4140 MotA/TolQ/ExbB proton channel YP_001584963.1 PFAM: cyclic nucleotide-binding; KEGG: bch:Bcen2424_3733 cyclic nucleotide-binding protein YP_001584964.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B2375 ABC transporter, ATPase subunit YP_001584965.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_5465 polar amino acid ABC transporter, inner membrane subunit YP_001584966.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3725 polar amino acid ABC transporter, inner membrane subunit YP_001584967.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2378 ABC lysine-arginine-ornithine transporter, periplasmic ligand binding protein YP_001584968.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bch:Bcen2424_3722 transcriptional regulator, histidine utilization repressor, GntR family YP_001584969.1 PFAM: glycosyl transferase family 28; KEGG: bur:Bcep18194_B2387 glycosyl transferase, family 28 YP_001584970.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B2388 transcriptional regulator, TetR family YP_001584971.1 KEGG: bur:Bcep18194_B2392 hypothetical protein YP_001584972.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2393 alpha/beta hydrolase YP_001584973.1 KEGG: bvi:Bcep1808_4116 hypothetical protein YP_001584974.1 PFAM: amino acid permease-associated region; KEGG: bch:Bcen2424_3715 amino acid permease-associated region YP_001584975.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B2397 diguanylate cyclase (GGDEF domain) YP_001584976.1 KEGG: bam:Bamb_5453 membrane protein YP_001584977.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_001584978.1 KEGG: bam:Bamb_5451 hypothetical protein YP_001584979.1 KEGG: bam:Bamb_5450 hypothetical protein YP_001584980.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bam:Bamb_1638 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001584981.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_B1424 cytosine/purines, uracil, thiamine, allantoin transporter YP_001584983.1 KEGG: bur:Bcep18194_B0515 hypothetical protein YP_001584984.1 KEGG: bps:BPSS2053 cell surface protein YP_001584985.1 KEGG: bch:Bcen2424_3711 hypothetical protein YP_001584986.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5441 major facilitator superfamily MFS_1 YP_001584987.1 KEGG: bch:Bcen2424_3709 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001584988.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5439 transcriptional regulator, LysR family YP_001584989.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2402 transcriptional regulator, LysR family YP_001584990.1 KEGG: bur:Bcep18194_B2403 hypothetical protein YP_001584991.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; KEGG: bch:Bcen2424_3705 transcriptional regulator, AraC family YP_001584992.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_3704 lysine exporter protein (LysE/YggA) YP_001584993.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bam:Bamb_5435 methyltransferase type 12 YP_001584994.1 PFAM: O-methyltransferase family 3; KEGG: bur:Bcep18194_B2421 O-methyltransferase, family 3 YP_001584995.1 KEGG: bam:Bamb_5428 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase YP_001584996.1 PFAM: aminoglycoside phosphotransferase; KEGG: bch:Bcen2424_3676 aminoglycoside phosphotransferase YP_001584997.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: bam:Bamb_5421 nicotinamide mononucleotide transporter PnuC YP_001584998.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bch:Bcen2424_3674 TonB-dependent siderophore receptor YP_001585000.1 KEGG: bam:Bamb_5419 hypothetical protein YP_001585001.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bch:Bcen2424_3671 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001585002.1 PFAM: Glutathione S-transferase domain; KEGG: bvi:Bcep1808_4098 glutathione S-transferase, N-terminal domain YP_001585003.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4097 transcriptional regulator, LysR family YP_001585004.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_5414 transcriptional regulator, TetR family YP_001585005.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B2443 short-chain dehydrogenase/reductase SDR YP_001585006.1 PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_5412 FAD dependent oxidoreductase YP_001585007.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2445 alpha/beta hydrolase YP_001585008.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bch:Bcen2424_3662 carboxymuconolactone decarboxylase YP_001585009.1 PFAM: Collagen triple helix repeat; KEGG: bte:BTH_II0398 lipoprotein YP_001585010.1 KEGG: bcn:Bcen_4703 hypothetical protein YP_001585011.1 KEGG: bam:Bamb_5404 hypothetical protein YP_001585012.1 KEGG: bam:Bamb_5402 hypothetical protein YP_001585013.1 PFAM: OmpA/MotB domain protein; KEGG: bch:Bcen2424_3655 OmpA/MotB domain protein YP_001585014.1 PFAM: protein of unknown function DUF802; KEGG: bur:Bcep18194_B2457 protein of unknown function DUF802 YP_001585015.1 KEGG: bch:Bcen2424_3653 hypothetical protein YP_001585016.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_5396 lysine exporter protein (LysE/YggA) YP_001585017.1 KEGG: bur:Bcep18194_B2462 hypothetical protein YP_001585018.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_001585019.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bch:Bcen2424_3637 transcriptional regulator, IclR family YP_001585020.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_5376 ABC transporter related YP_001585021.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3634 binding-protein-dependent transport systems inner membrane component YP_001585022.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3633 binding-protein-dependent transport systems inner membrane component YP_001585023.1 KEGG: bch:Bcen2424_3632 hypothetical protein YP_001585024.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_5372 BFD domain protein (2Fe-2S)-binding domain protein YP_001585025.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_3630 FAD dependent oxidoreductase YP_001585026.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_5370 extracellular solute-binding protein, family 1 YP_001585027.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2487 major facilitator superfamily (MFS_1) transporter YP_001585028.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001585029.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bch:Bcen2424_3626 NAD/NADP octopine/nopaline dehydrogenase YP_001585030.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B2490 transcriptional regulator, AraC family YP_001585031.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3624 transcriptional regulator, LysR family YP_001585032.1 PFAM: porin Gram-negative type; KEGG: bch:Bcen2424_3623 porin, gram-negative type YP_001585033.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3622 major facilitator superfamily MFS_1 YP_001585034.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_5357 ferredoxin YP_001585035.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2495 transcriptional regulator, LysR family YP_001585036.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2311 transcriptional regulator, LysR family YP_001585037.1 KEGG: bxe:Bxe_B2310 hypothetical protein YP_001585038.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_B2309 4-hydroxyphenylacetate 3-monooxygenase coupling protein YP_001585039.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2308 hypothetical protein YP_001585040.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2307 major facilitator superfamily (MFS)metabolite/H+ symporter YP_001585041.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bch:Bcen2424_3619 Rieske (2Fe-2S) domain protein YP_001585042.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bur:Bcep18194_B2497 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001585043.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: bam:Bamb_5353 4-oxalocrotonate tautomerase family enzyme YP_001585044.1 KEGG: bam:Bamb_5352 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001585045.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B2500 acyl-CoA dehydrogenase-like YP_001585046.1 KEGG: bam:Bamb_5350 hypothetical protein YP_001585047.1 KEGG: bch:Bcen2424_3613 hypothetical protein YP_001585048.1 PFAM: Amidase; KEGG: bur:Bcep18194_B2503 amidase YP_001585049.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_3611 short-chain dehydrogenase/reductase SDR YP_001585050.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bam:Bamb_5346 two component transcriptional regulator, LuxR family YP_001585051.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: bam:Bamb_5345 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit YP_001585052.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3608 major facilitator superfamily MFS_1 YP_001585053.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_5341 GCN5-related N-acetyltransferase YP_001585054.1 PFAM: SNARE associated Golgi protein; KEGG: bur:Bcep18194_B2518 DedA family membrane protein YP_001585055.1 KEGG: bch:Bcen2424_3596 hypothetical protein YP_001585056.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5327 major facilitator superfamily MFS_1 YP_001585057.1 KEGG: bch:Bcen2424_3590 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein YP_001585058.1 KEGG: bpm:BURPS1710b_2031 hypothetical protein YP_001585059.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_5325 two component transcriptional regulator, winged helix family YP_001585060.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bam:Bamb_5324 periplasmic sensor signal transduction histidine kinase YP_001585061.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5320 ABC transporter related YP_001585062.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_5319 ABC transporter related YP_001585063.1 PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B2534 ABC branched-chain amino acid family transporter, fused inner membrane subunits YP_001585064.1 PFAM: Extracellular ligand-binding receptor; KEGG: bch:Bcen2424_3583 extracellular ligand-binding receptor YP_001585065.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3582 transcriptional regulator, LysR family YP_001585066.1 PFAM: monooxygenase FAD-binding; KEGG: bch:Bcen2424_3581 monooxygenase, FAD-binding YP_001585067.1 KEGG: bur:Bcep18194_B2538 hypothetical protein YP_001585068.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bch:Bcen2424_3579 uncharacterized peroxidase-related enzyme YP_001585069.1 KEGG: bam:Bamb_5309 molecular chaperone-like protein YP_001585070.1 KEGG: bch:Bcen2424_3574 molecular chaperone-like protein YP_001585071.1 KEGG: bvi:Bcep1808_4044 hypothetical protein YP_001585072.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_5300 glutathione S-transferase, N-terminal domain YP_001585073.1 KEGG: bam:Bamb_5299 hypothetical protein YP_001585074.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; KEGG: bch:Bcen2424_3564 transcriptional regulator, MarR family YP_001585075.1 KEGG: bch:Bcen2424_3563 PEP phosphonomutase YP_001585076.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4036 major facilitator superfamily MFS_1 YP_001585077.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5293 transcriptional regulator, AraC family YP_001585078.1 KEGG: bmn:BMA10247_1306 phosphoenolpyruvate synthase YP_001585079.1 KEGG: bch:Bcen2424_3558 hypothetical protein YP_001585080.1 KEGG: bch:Bcen2424_3557 hypothetical protein YP_001585081.1 KEGG: bur:Bcep18194_B2568 hypothetical protein YP_001585082.1 PFAM: Domain of unknown function DUF1840; KEGG: bur:Bcep18194_B2569 hypothetical protein YP_001585083.1 regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes YP_001585084.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP YP_001585085.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: bam:Bamb_5284 5-oxoprolinase (ATP-hydrolyzing) YP_001585086.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2575 major facilitator superfamily (MFS_1) transporter YP_001585087.1 PFAM: protein of unknown function DUF1445; KEGG: bur:Bcep18194_B2576 hypothetical protein YP_001585088.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5281 transcriptional regulator, LysR family YP_001585089.1 KEGG: bch:Bcen2424_3546 hypothetical protein YP_001585090.1 PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B2582 NlpA lipoprotein YP_001585091.1 PFAM: protein of unknown function DUF323; KEGG: bch:Bcen2424_3544 protein of unknown function DUF323 YP_001585092.1 PFAM: sulfatase; KEGG: bam:Bamb_5276 sulfatase YP_001585094.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: reh:H16_B0248 filamentous hemagglutinin activation/secretion protein YP_001585095.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rso:RSc1775 probable hemagglutinin-related protein YP_001585096.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2592 major facilitator superfamily (MFS_1) transporter YP_001585097.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_B2593 protein of unknown function DUF6, transmembrane YP_001585098.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3540 transcriptional regulator, LysR family YP_001585099.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B2595 zinc-containing alcohol dehydrogenase superfamily YP_001585100.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_6321 porin, gram-negative type YP_001585101.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2597 ABC amino acid transporter, periplasmic ligand binding protein YP_001585102.1 KEGG: bur:Bcep18194_B2598 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001585103.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6318 transcriptional regulator, LysR family YP_001585104.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_5270 lysine exporter protein (LysE/YggA) YP_001585105.1 KEGG: bch:Bcen2424_3509 hypothetical protein YP_001585106.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2631 alpha/beta hydrolase YP_001585107.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B2649 short-chain dehydrogenase/reductase SDR YP_001585108.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2650 transcriptional regulator, LysR family YP_001585109.1 KEGG: bch:Bcen2424_3499 hypothetical protein YP_001585110.1 PFAM: aminotransferase class I and II; KEGG: bch:Bcen2424_3498 aminotransferase, class I and II YP_001585111.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_001585112.1 KEGG: bch:Bcen2424_5113 hypothetical protein YP_001585113.1 PFAM: FAD dependent oxidoreductase; KEGG: bch:Bcen2424_3475 FAD dependent oxidoreductase YP_001585114.1 PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B2678 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_001585115.1 PFAM: CsbD family protein; KEGG: bur:Bcep18194_B2679 conserved hypothetical protein, CsbD-like YP_001585116.1 KEGG: bur:Bcep18194_B2680 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001585117.1 KEGG: bam:Bamb_5245 hypothetical protein YP_001585118.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bch:Bcen2424_3469 transport-associated YP_001585119.1 PFAM: CsbD family protein; KEGG: bam:Bamb_5243 CsbD family protein YP_001585121.1 KEGG: bam:Bamb_5242 hypothetical protein YP_001585122.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5241 transcriptional regulator, LysR family YP_001585123.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5240 aldehyde dehydrogenase YP_001585124.1 KEGG: bvi:Bcep1808_3991 hypothetical protein YP_001585125.1 PFAM: protein of unknown function DUF1330; KEGG: bvi:Bcep1808_3990 protein of unknown function DUF1330 YP_001585126.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bch:Bcen2424_3453 NAD-dependent epimerase/dehydratase YP_001585127.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_5235 transcriptional regulator, LacI family YP_001585128.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3451 major facilitator superfamily MFS_1 YP_001585129.1 PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; AlkA domain protein; KEGG: bch:Bcen2424_3450 transcriptional regulator, AraC family YP_001585130.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bam:Bamb_5231 methylated-DNA--protein-cysteine methyltransferase YP_001585131.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2723 transcriptional regulator, AsnC family YP_001585132.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bam:Bamb_5227 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_001585133.1 KEGG: bch:Bcen2424_3749 hypothetical protein YP_001585134.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rru:Rru_A0339 short-chain dehydrogenase/reductase SDR YP_001585135.1 KEGG: rru:Rru_A0338 hypothetical protein YP_001585136.1 PFAM: helix-turn-helix HxlR type; KEGG: rpa:RPA0326 DUF24, predicted transcriptional regulator, related to MarR family YP_001585137.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bch:Bcen2424_5184 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_001585138.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ppf:Pput_2719 alcohol dehydrogenase. zinc-binding type 1 YP_001585139.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0550 hydrolase, alpha/beta fold family YP_001585140.1 KEGG: bch:Bcen2424_5200 hypothetical protein YP_001585141.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1066 zinc-containing alcohol dehydrogenase superfamily YP_001585142.1 KEGG: msm:MSMEG_6830 hypothetical protein YP_001585143.1 PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_6831 hydrolase, alpha/beta hydrolase fold family protein YP_001585144.1 PFAM: response regulator receiver; KEGG: bvi:Bcep1808_5920 response regulator receiver protein YP_001585145.1 KEGG: bvi:Bcep1808_5919 hypothetical protein YP_001585146.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bvi:Bcep1808_5918 histidine kinase YP_001585147.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_5917 response regulator receiver protein YP_001585149.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bvi:Bcep1808_5915 transcriptional regulator, AraC family YP_001585150.1 PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_6660 porin, gram-negative type YP_001585151.1 PFAM: protein of unknown function DUF1624; KEGG: nar:Saro_2951 protein of unknown function DUF1624 YP_001585152.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; protein of unknown function DUF442; KEGG: bam:Bamb_5203 aminotransferase, class V YP_001585153.1 KEGG: bch:Bcen2424_3421 hypothetical protein YP_001585154.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bam:Bamb_5195 peptidase S10, serine carboxypeptidase YP_001585155.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bam:Bamb_5194 endonuclease/exonuclease/phosphatase YP_001585156.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3395 major facilitator superfamily MFS_1 YP_001585157.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2782 transcriptional regulator, LysR family YP_001585158.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2784 FAD dependent oxidoreductase YP_001585159.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bur:Bcep18194_B2785 protein of unknown function DUF861 YP_001585160.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B2786 transcriptional regulator, LuxR family YP_001585161.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bur:Bcep18194_B2787 agmatinase YP_001585162.1 PFAM: Aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B2788 betaine-aldehyde dehydrogenase YP_001585163.1 KEGG: bam:Bamb_5164 hypothetical protein YP_001585164.1 KEGG: bam:Bamb_5163 uncharacterized membrane-anchored protein YP_001585165.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2821 transcriptional regulator, LysR family YP_001585166.1 KEGG: bam:Bamb_5161 hypothetical protein YP_001585167.1 catalyzes the formation of acetate from pyruvate YP_001585168.1 KEGG: bvi:Bcep1808_3931 transcriptional regulator, AsnC family YP_001585169.1 KEGG: bur:Bcep18194_B2872 hypothetical protein YP_001585170.1 KEGG: bur:Bcep18194_B2873 hypothetical protein YP_001585171.1 KEGG: bur:Bcep18194_B2874 hypothetical protein YP_001585172.1 KEGG: bur:Bcep18194_B2875 hypothetical protein YP_001585173.1 KEGG: bur:Bcep18194_B2876 hypothetical protein YP_001585174.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bur:Bcep18194_B2877 hypothetical protein YP_001585175.1 KEGG: bur:Bcep18194_B2878 hypothetical protein YP_001585176.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_3375 transcriptional regulator, AsnC family YP_001585177.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate YP_001585178.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2879 multi-sensor hybrid histidine kinase YP_001585179.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bur:Bcep18194_B2880 two component transcriptional regulator, LuxR family YP_001585180.1 KEGG: bpd:BURPS668_A0184 hypothetical protein YP_001585181.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_B2882 periplasmic sensor hybrid histidine kinase YP_001585182.1 PFAM: response regulator receiver; BetR domain protein; KEGG: bam:Bamb_5147 response regulator receiver protein YP_001585183.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bur:Bcep18194_B2887 hypothetical protein YP_001585184.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bam:Bamb_5145 periplasmic sensor hybrid histidine kinase YP_001585185.1 PFAM: protein of unknown function UPF0047; KEGG: bur:Bcep18194_B2889 hypothetical protein YP_001585186.1 KEGG: bur:Bcep18194_B2890 hypothetical protein YP_001585187.1 KEGG: bur:Bcep18194_B2891 hypothetical protein YP_001585188.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2892 major facilitator superfamily (MFS_1) transporter YP_001585189.1 KEGG: bur:Bcep18194_B2893 hypothetical protein YP_001585190.1 KEGG: bvi:Bcep1808_3920 hypothetical protein YP_001585191.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bch:Bcen2424_3357 transcriptional regulator, AsnC family YP_001585192.1 PFAM: AzlC family protein; KEGG: bam:Bamb_5135 AzlC family protein YP_001585193.1 PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_B2901 protein of unknown function DUF931 YP_001585194.1 KEGG: bur:Bcep18194_B2902 acid phosphatase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_001585195.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5132 short-chain dehydrogenase/reductase SDR YP_001585196.1 PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_5131 cupin 2, conserved barrel domain protein YP_001585197.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001585198.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_3344 transcriptional regulator, LysR family YP_001585200.1 KEGG: bam:Bamb_5121 hypothetical protein YP_001585201.1 KEGG: bch:Bcen2424_3167 hypothetical protein YP_001585202.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA YP_001585203.1 KEGG: bam:Bamb_5097 ABC phosphate/phosphonate transporter, periplasmic ligand binding protein YP_001585204.1 PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_B2975 fatty acid desaturase YP_001585205.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B2976 benzoate membrane transport protein YP_001585206.1 KEGG: bam:Bamb_5094 NmrA family protein YP_001585207.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_5860 transcriptional regulator, AraC family YP_001585208.1 KEGG: bur:Bcep18194_B2982 hypothetical protein YP_001585209.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5092 transcriptional regulator, LysR family YP_001585210.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_5091 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001585211.1 KEGG: bam:Bamb_5090 hypothetical protein YP_001585212.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter, NRAMP family YP_001585213.1 PFAM: manganese containing catalase; KEGG: bvi:Bcep1808_5181 catalase YP_001585214.1 PFAM: beta-lactamase domain protein; KEGG: xac:XAC2368 hypothetical protein YP_001585215.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth YP_001585216.1 PFAM: chaperonin Cpn10; KEGG: bch:Bcen2424_6250 chaperonin Cpn10 YP_001585217.1 KEGG: bvi:Bcep1808_5186 hypothetical protein YP_001585218.1 KEGG: bmn:BMA10247_2613 hypothetical protein YP_001585219.1 PFAM: EAL domain protein; KEGG: bch:Bcen2424_5852 diguanylate phosphodiesterase YP_001585220.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C YP_001585221.1 PFAM: heat shock protein DnaJ domain protein; KEGG: bam:Bamb_5083 heat shock protein DnaJ domain protein YP_001585222.1 PFAM: extracellular solute-binding protein family 3; KEGG: oan:Oant_4588 extracellular solute-binding protein family 3 YP_001585223.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_4584 ABC transporter related YP_001585224.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_4585 polar amino acid ABC transporter, inner membrane subunit YP_001585225.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_4586 polar amino acid ABC transporter, inner membrane subunit YP_001585226.1 PFAM: dihydrodipicolinate synthetase; KEGG: hch:HCH_03163 dihydrodipicolinate synthase YP_001585227.1 PFAM: proline racemase; KEGG: saz:Sama_1530 proline racemase YP_001585228.1 PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll6285 D-amino acid dehydrogenase, small subunit YP_001585229.1 PFAM: Aldehyde Dehydrogenase; KEGG: cps:CPS_0096 betaine aldehyde dehydrogenase YP_001585230.1 PFAM: proline racemase; KEGG: mes:Meso_1587 proline racemase YP_001585231.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ret:RHE_PC00043 transcriptional regulator protein, AsnC/GntR family YP_001585232.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5082 transcriptional regulator, LysR family YP_001585233.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bam:Bamb_5081 acyl-CoA dehydrogenase domain protein YP_001585234.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B3036 short-chain dehydrogenase/reductase SDR YP_001585235.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_5079 short-chain dehydrogenase/reductase SDR YP_001585236.1 PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B3038 aminoglycoside phosphotransferase YP_001585237.1 PFAM: Phosphoglycerate mutase; KEGG: bam:Bamb_5077 phosphoglycerate mutase YP_001585238.1 KEGG: bch:Bcen2424_5838 hypothetical protein YP_001585239.1 KEGG: bam:Bamb_5059 major facilitator superfamily MFS_1 YP_001585240.1 PFAM: protein of unknown function DUF1289; KEGG: bvi:Bcep1808_3873 protein of unknown function DUF1289 YP_001585241.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bch:Bcen2424_3406 cation diffusion facilitator family transporter YP_001585242.1 PFAM: protein of unknown function DUF156; KEGG: bam:Bamb_5055 uncharacterized BCR YP_001585243.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bch:Bcen2424_5753 lysine exporter protein (LysE/YggA) YP_001585244.1 KEGG: bch:Bcen2424_5752 hypothetical protein YP_001585245.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3124 major facilitator superfamily (MFS_1) transporter YP_001585246.1 KEGG: bvi:Bcep1808_3739 4-carboxymuconolactone decarboxylase; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase YP_001585247.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5020 3-oxoadipate enol-lactonase YP_001585248.1 Catalyzes the cycloisomerization of cis,cis-muconate YP_001585249.1 KEGG: bam:Bamb_5018 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001585250.1 KEGG: bur:Bcep18194_B3129 3-oxoadipate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001585251.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_001585252.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_3745 transcriptional regulator, LysR family YP_001585253.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_001585254.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_5013 short-chain dehydrogenase/reductase SDR YP_001585255.1 KEGG: bvi:Bcep1808_3748 serine O-acetyltransferase YP_001585256.1 KEGG: bvi:Bcep1808_3749 hypothetical protein YP_001585257.1 KEGG: bur:Bcep18194_B3136 hypothetical protein YP_001585258.1 PFAM: UspA domain protein; KEGG: bam:Bamb_5009 UspA domain protein YP_001585259.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bur:Bcep18194_B3138 transcriptional regulator, Crp/Fnr family YP_001585260.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001585261.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B3140 lysine exporter family protein (LysE/YggA) YP_001585262.1 PFAM: aldo/keto reductase; KEGG: bam:Bamb_5005 aldo/keto reductase YP_001585263.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B3145 transcriptional regulator, AraC family YP_001585264.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_5003 cupin 2, conserved barrel domain protein YP_001585265.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3147 major facilitator superfamily (MFS_1) transporter YP_001585266.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bch:Bcen2424_5726 alcohol dehydrogenase GroES domain protein YP_001585267.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B3149 short-chain dehydrogenase/reductase SDR YP_001585268.1 KEGG: bam:Bamb_6060 hypothetical protein YP_001585269.1 PFAM: transcriptional regulator PadR family protein; KEGG: bur:Bcep18194_B3162 transcriptional regulator, PadR-like family YP_001585270.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: bur:Bcep18194_B3163 siderophore-interacting protein YP_001585271.1 KEGG: bch:Bcen2424_5716 hypothetical protein YP_001585272.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bam:Bamb_4984 phosphoesterase, PA-phosphatase related YP_001585273.1 converts acetoacetate to acetone and carbon dioxide YP_001585274.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate YP_001585275.1 PFAM: Patatin; KEGG: bam:Bamb_4981 patatin YP_001585276.1 KEGG: bch:Bcen2424_5711 hypothetical protein YP_001585277.1 KEGG: bur:Bcep18194_B1350 hypothetical protein YP_001585278.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4977 transcriptional regulator, LysR family YP_001585279.1 KEGG: bvi:Bcep1808_3784 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001585280.1 PFAM: protein of unknown function DUF1348; KEGG: bch:Bcen2424_5705 protein of unknown function DUF1348 YP_001585281.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3175 transcriptional regulator, TetR family YP_001585282.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_001585283.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_001585284.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bch:Bcen2424_5700 transcriptional regulator, XRE family with cupin sensor YP_001585285.1 KEGG: bam:Bamb_4970 hypothetical protein YP_001585286.1 KEGG: bur:Bcep18194_C6524 hypothetical protein YP_001585287.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5998 transcriptional regulator, LysR family YP_001585288.1 PFAM: adenylosuccinate synthetase; KEGG: bur:Bcep18194_C6526 adenylosuccinate synthase YP_001585289.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5996 transcriptional regulator, LysR family YP_001585290.1 PFAM: dienelactone hydrolase; KEGG: bam:Bamb_5994 carboxymethylenebutenolidase YP_001585291.1 KEGG: bur:Bcep18194_C6611 hypothetical protein YP_001585292.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6612 transcriptional regulator, AraC family YP_001585293.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bam:Bamb_5991 metal dependent phosphohydrolase YP_001585294.1 PFAM: conserved hypothetical protein; KEGG: bch:Bcen2424_6212 hypothetical protein YP_001585295.1 PFAM: RES domain protein; KEGG: bch:Bcen2424_6213 hypothetical protein YP_001585296.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_C6618 phage integrase YP_001585297.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_C6623 gamma-glutamyltransferase YP_001585298.1 KEGG: bur:Bcep18194_C6625 hypothetical protein YP_001585299.1 PFAM: metallophosphoesterase; KEGG: bam:Bamb_5979 metallophosphoesterase YP_001585300.1 KEGG: bch:Bcen2424_6222 hypothetical protein YP_001585301.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bam:Bamb_5977 metal dependent phosphohydrolase YP_001585302.1 KEGG: bam:Bamb_5976 hypothetical protein YP_001585303.1 KEGG: bch:Bcen2424_6225 hypothetical protein YP_001585304.1 KEGG: bur:Bcep18194_C6642 GCN5-related N-acetyltransferase YP_001585305.1 KEGG: bur:Bcep18194_C6644 hypothetical protein YP_001585306.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6649 transcriptional regulator, AraC family YP_001585307.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6650 AMP-dependent synthetase and ligase YP_001585308.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C6651 short-chain dehydrogenase/reductase SDR YP_001585309.1 KEGG: bch:Bcen2424_6232 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001585310.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bur:Bcep18194_C6653 transcriptional regulator, TetR family YP_001585311.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001585312.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain YP_001585313.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines YP_001585314.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6657 cytosine/purines, uracil, thiamine, allantoin transporter YP_001585315.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_001585316.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_C6662 dioxygenase, iron-sulfur subunit YP_001585317.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_001585318.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bur:Bcep18194_C6664 cytochrome c biogenesis protein, transmembrane region YP_001585319.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bch:Bcen2424_6245 methionine-R-sulfoxide reductase YP_001585320.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bam:Bamb_5785 two component transcriptional regulator, winged helix family YP_001585321.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_C6810 periplasmic sensor signal transduction histidine kinase YP_001585322.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5783 transcriptional regulator, AraC family YP_001585323.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bch:Bcen2424_6272 AMP-dependent synthetase and ligase YP_001585324.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5781 transcriptional regulator, AraC family YP_001585325.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bch:Bcen2424_6274 acyl-CoA dehydrogenase domain protein YP_001585326.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bvi:Bcep1808_5643 electron-transferring-flavoprotein dehydrogenase YP_001585327.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA YP_001585328.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bch:Bcen2424_6277 3-hydroxybutyryl-CoA dehydrogenase YP_001585329.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bch:Bcen2424_3214 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein YP_001585330.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3215 major facilitator superfamily MFS_1 YP_001585331.1 PFAM: Aldose 1-epimerase; KEGG: bch:Bcen2424_6371 aldose 1-epimerase YP_001585332.1 PFAM: regulatory protein ArsR; KEGG: bch:Bcen2424_5459 transcriptional regulator, ArsR family YP_001585333.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bam:Bamb_4802 activator of HSP90 ATPase 1 family protein YP_001585334.1 KEGG: bur:Bcep18194_B1150 hypothetical protein YP_001585335.1 KEGG: bch:Bcen2424_5957 hypothetical protein YP_001585336.1 KEGG: bch:Bcen2424_5958 hypothetical protein YP_001585337.1 PFAM: ribosomal protein S21; KEGG: bam:Bamb_5802 ribosomal protein S21 YP_001585338.1 PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_B0304 transcriptional regulator, ArsR family YP_001585339.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rme:Rmet_0331 protein tyrosine phosphatase YP_001585340.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bxe:Bxe_B0303 arsenite/antimonite exporter, ArsB like YP_001585341.1 KEGG: bur:Bcep18194_C6929 hypothetical protein YP_001585342.1 KEGG: bam:Bamb_5715 2-keto-4-pentenoate hydratase-like protein YP_001585343.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_5654 UspA domain protein YP_001585344.1 KEGG: bam:Bamb_5713 hypothetical protein YP_001585345.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bam:Bamb_5711 nitrate reductase, alpha subunit YP_001585346.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: bam:Bamb_5710 nitrate reductase, beta subunit YP_001585347.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: bam:Bamb_5709 nitrate reductase molybdenum cofactor assembly chaperone YP_001585348.1 KEGG: bam:Bamb_5708 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_001585349.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bam:Bamb_5707 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001585350.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5706 major facilitator superfamily MFS_1 YP_001585351.1 PFAM: integrase family protein; KEGG: bur:Bcep18194_C6948 phage integrase YP_001585352.1 KEGG: bam:Bamb_5703 hypothetical protein YP_001585353.1 TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: reh:H16_A2073 hypothetical protein YP_001585354.1 SMART: helix-turn-helix domain protein; KEGG: rso:RSc2661 transcription regulator protein YP_001585355.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_C6954 transcriptional regulator, GntR family, contains an aminotransferase domain YP_001585356.1 KEGG: bur:Bcep18194_B1367 protein of unknown function DUF81 YP_001585357.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bch:Bcen2424_6402 thiamineS protein YP_001585358.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bam:Bamb_5689 molybdopterin biosynthesis MoaE YP_001585359.1 KEGG: bch:Bcen2424_6404 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001585360.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bur:Bcep18194_C6966 molybdopterin binding protein, MoeA YP_001585361.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bch:Bcen2424_6406 formate dehydrogenase family accessory protein FdhD YP_001585362.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bam:Bamb_5685 cytochrome bd ubiquinol oxidase, subunit I YP_001585363.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bch:Bcen2424_6408 cytochrome d ubiquinol oxidase, subunit II YP_001585364.1 PFAM: protein of unknown function UPF0187; KEGG: bam:Bamb_5683 protein of unknown function UPF0187 YP_001585365.1 KEGG: bam:Bamb_5679 hypothetical protein YP_001585366.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6991 flavin-containing monooxygenase FMO YP_001585367.1 PFAM: Endoribonuclease L-PSP; KEGG: bam:Bamb_5674 endoribonuclease L-PSP YP_001585368.1 PFAM: protein of unknown function DUF1028; KEGG: bur:Bcep18194_C6993 protein of unknown function DUF1028 YP_001585369.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001585370.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5671 transcriptional regulator, LysR family YP_001585371.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6996 cytosine/purines, uracil, thiamine, allantoin transporter YP_001585372.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bur:Bcep18194_C6997 oxidoreductase alpha (molybdopterin) subunit YP_001585373.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_6423 ATPase AAA-2 domain protein YP_001585374.1 KEGG: bch:Bcen2424_6424 hypothetical protein YP_001585375.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: bch:Bcen2424_6425 Linocin_M18 bacteriocin protein YP_001585376.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bam:Bamb_5665 Dyp-type peroxidase family YP_001585377.1 PFAM: regulatory protein LysR; KEGG: bur:Bcep18194_C7002 transcriptional regulator, LysR family YP_001585378.1 PFAM: phosphate-starvation-inducible E; KEGG: bur:Bcep18194_C7003 phosphate-starvation-inducible protein E YP_001585379.1 KEGG: bam:Bamb_5663 membrane protein YP_001585380.1 KEGG: bch:Bcen2424_6429 hypothetical protein YP_001585381.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bur:Bcep18194_C6954 transcriptional regulator, GntR family, contains an aminotransferase domain YP_001585382.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_001585383.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_C7008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001585385.1 KEGG: bch:Bcen2424_6434 hypothetical protein YP_001585386.1 KEGG: bch:Bcen2424_6436 hypothetical protein YP_001585387.1 PFAM: aminoglycoside phosphotransferase; KEGG: pol:Bpro_0415 aminoglycoside phosphotransferase YP_001585388.1 PFAM: aminotransferase class-III; KEGG: pol:Bpro_0414 aminotransferase class-III YP_001585389.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bvi:Bcep1808_4394 transcriptional regulator, GntR family YP_001585390.1 KEGG: bur:Bcep18194_B2170 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase YP_001585391.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_B2169 ABC spermidine/putrescine transporter, periplasmic ligand binding protein YP_001585392.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_3920 binding-protein-dependent transport systems inner membrane component YP_001585393.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_3299 binding-protein-dependent transport systems inner membrane component YP_001585394.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_5660 alcohol dehydrogenase GroES domain protein YP_001585395.1 PFAM: protein of unknown function DUF326; KEGG: bam:Bamb_5659 protein of unknown function DUF326 YP_001585396.1 KEGG: bch:Bcen2424_6439 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001585397.1 KEGG: bcn:Bcen_1390 hypothetical protein YP_001585398.1 PFAM: transport-associated; KEGG: bch:Bcen2424_6440 transport-associated YP_001585399.1 PFAM: ABC transporter transmembrane region; response regulator receiver; ABC transporter related; ATP-binding region ATPase domain protein; SMART: AAA ATPase; KEGG: bch:Bcen2424_6441 response regulator receiver protein YP_001585400.1 KEGG: bch:Bcen2424_6442 hypothetical protein YP_001585401.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6443 short-chain dehydrogenase/reductase SDR YP_001585402.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bch:Bcen2424_6444 histidinol-phosphate phosphatase family protein YP_001585403.1 PFAM: glycosyl transferase family 9; KEGG: bvi:Bcep1808_5696 glycosyl transferase, family 9 YP_001585404.1 PFAM: Carbamoyltransferase; KEGG: bch:Bcen2424_6446 carbamoyltransferase YP_001585405.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5649 glycosyl transferase, family 2 YP_001585406.1 PFAM: glycosyl transferase family 9; KEGG: bvi:Bcep1808_5699 glycosyl transferase, family 9 YP_001585407.1 PFAM: glycosyl transferase group 1; KEGG: bvi:Bcep1808_5700 glycosyl transferase, group 1 YP_001585408.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bam:Bamb_5646 sigma54 specific transcriptional regulator, fis family YP_001585409.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bch:Bcen2424_6451 two component, sigma54 specific, transcriptional regulator, fis family YP_001585410.1 PFAM: glycosyl transferase family 2; KEGG: bam:Bamb_5644 glycosyl transferase, family 2 YP_001585411.1 PFAM: LmbE family protein; KEGG: bam:Bamb_5643 hypothetical protein YP_001585412.1 KEGG: bur:Bcep18194_C7014 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001585413.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bvi:Bcep1808_5706 NAD-dependent epimerase/dehydratase YP_001585414.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_5640 glycosyl transferase, group 1 YP_001585415.1 PFAM: transport-associated; KEGG: bch:Bcen2424_6457 transport-associated YP_001585416.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6458 short-chain dehydrogenase/reductase SDR YP_001585417.1 KEGG: bch:Bcen2424_6459 hypothetical protein YP_001585418.1 KEGG: bch:Bcen2424_6460 hypothetical protein YP_001585419.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6461 short-chain dehydrogenase/reductase SDR YP_001585420.1 KEGG: bam:Bamb_5634 hypothetical protein YP_001585421.1 KEGG: bch:Bcen2424_6463 hypothetical protein YP_001585422.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpd:BURPS668_A3146 oxidoreductase, zinc-binding dehydrogenase family YP_001585423.1 KEGG: bch:Bcen2424_6464 natural resistance-associated macrophage protein YP_001585424.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bam:Bamb_5631 phage SPO1 DNA polymerase-related protein YP_001585425.1 PFAM: response regulator receiver; KEGG: bam:Bamb_5630 response regulator receiver protein YP_001585426.1 PFAM: PRC-barrel domain protein; KEGG: bam:Bamb_5622 PRC-barrel domain protein YP_001585427.1 PFAM: CBS domain containing protein; KEGG: bvi:Bcep1808_5724 CBS domain containing protein YP_001585428.1 KEGG: bch:Bcen2424_6472 hypothetical protein YP_001585429.1 KEGG: bch:Bcen2424_6473 hypothetical protein YP_001585430.1 KEGG: bch:Bcen2424_6474 hypothetical protein YP_001585431.1 KEGG: bch:Bcen2424_6475 hypothetical protein YP_001585432.1 KEGG: bam:Bamb_5617 hypothetical protein YP_001585433.1 PFAM: protein of unknown function DUF892; KEGG: bch:Bcen2424_6476 protein of unknown function DUF892 YP_001585434.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_001585435.1 PFAM: protein of unknown function DUF1328; KEGG: bam:Bamb_5614 protein of unknown function DUF1328 YP_001585436.1 KEGG: bur:Bcep18194_C7022 hypothetical protein YP_001585437.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bvi:Bcep1808_5734 Ku domain protein YP_001585438.1 TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bcn:Bcen_1346 ATP dependent DNA ligase YP_001585439.1 PFAM: sodium/hydrogen exchanger; KEGG: bch:Bcen2424_6484 sodium/hydrogen exchanger YP_001585440.1 KEGG: bvi:Bcep1808_5737 hypothetical protein YP_001585441.1 KEGG: bch:Bcen2424_6486 hypothetical protein YP_001585442.1 KEGG: bam:Bamb_5606 hypothetical protein YP_001585443.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bam:Bamb_5605 intracellular protease, PfpI family YP_001585444.1 KEGG: bam:Bamb_5604 hypothetical protein YP_001585445.1 KEGG: bvi:Bcep1808_5741 hypothetical protein YP_001585446.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: bch:Bcen2424_6491 phosphatidylserine decarboxylase-related YP_001585447.1 KEGG: bch:Bcen2424_6493 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001585448.1 KEGG: bch:Bcen2424_6494 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_001585449.1 KEGG: bam:Bamb_5594 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001585450.1 KEGG: bvi:Bcep1808_5811 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001585451.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_001585452.1 KEGG: bch:Bcen2424_6498 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001585453.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bch:Bcen2424_6499 alpha amylase, catalytic region YP_001585454.1 KEGG: bam:Bamb_5589 hypothetical protein YP_001585455.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bch:Bcen2424_6501 endonuclease/exonuclease/phosphatase YP_001585456.1 PFAM: phospholipase D/Transphosphatidylase; SNARE associated Golgi protein; KEGG: bch:Bcen2424_6502 phospholipase D/transphosphatidylase YP_001585457.1 KEGG: bam:Bamb_5586 hypothetical protein YP_001585458.1 PFAM: MgtC/SapB transporter; KEGG: bam:Bamb_5585 MgtC/SapB transporter YP_001585459.1 KEGG: bam:Bamb_5584 hypothetical protein YP_001585460.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001585461.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_6536 cytochrome c, class I YP_001585462.1 KEGG: bch:Bcen2424_6537 hypothetical protein YP_001585463.1 TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit III; cytochrome c oxidase subunit I; KEGG: bam:Bamb_6573 cytochrome c oxidase, subunit I YP_001585464.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bam:Bamb_6572 cytochrome c, monohaem YP_001585465.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_6571 short-chain dehydrogenase/reductase SDR YP_001585466.1 PFAM: glycoside hydrolase 15-related; KEGG: bvi:Bcep1808_5835 glycoside hydrolase 15-related YP_001585467.1 catalyzes the formation of acetate from pyruvate YP_001585468.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bam:Bamb_6568 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein YP_001585469.1 KEGG: bvi:Bcep1808_5838 hypothetical protein YP_001585470.1 KEGG: bam:Bamb_6566 hypothetical protein YP_001585471.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bvi:Bcep1808_5840 glucose-methanol-choline oxidoreductase YP_001585472.1 PFAM: protein of unknown function DUF305; KEGG: bch:Bcen2424_6541 protein of unknown function DUF305 YP_001585473.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bvi:Bcep1808_5842 cytochrome bd ubiquinol oxidase, subunit I YP_001585474.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bvi:Bcep1808_5843 cytochrome d ubiquinol oxidase, subunit II YP_001585475.1 PFAM: FRG domain protein; KEGG: bam:Bamb_6563 hypothetical protein YP_001585476.1 PFAM: protein of unknown function DUF1452; KEGG: bur:Bcep18194_C6797 protein of unknown function DUF1452 YP_001585477.1 KEGG: nmu:Nmul_A2305 hypothetical protein YP_001585478.1 PFAM: transport-associated; KEGG: bam:Bamb_6562 transport-associated YP_001585479.1 KEGG: bur:Bcep18194_C7053 hypothetical protein YP_001585480.1 PFAM: NUDIX hydrolase; KEGG: bch:Bcen2424_6546 NUDIX hydrolase YP_001585481.1 PFAM: protein of unknown function DUF892; KEGG: bvi:Bcep1808_5182 protein of unknown function DUF892 YP_001585482.1 PFAM: manganese containing catalase; KEGG: bvi:Bcep1808_5870 catalase YP_001585483.1 PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_6548 secretion protein HlyD family protein YP_001585484.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_6559 drug resistance transporter, EmrB/QacA subfamily YP_001585485.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bcn:Bcen_1281 RND efflux system, outer membrane lipoprotein, NodT YP_001585486.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1445 10 TMS drug/metabolite exporter, DME family, DMT super family YP_001585487.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_C_3765 hypothetical protein YP_001585488.1 KEGG: ter:Tery_0481 TPR repeat YP_001585489.1 KEGG: bam:Bamb_3782 polypeptide-transport-associated domain protein, ShlB-type YP_001585490.1 KEGG: bch:Bcen2424_6046 hypothetical protein YP_001585491.1 PFAM: Saccharopine dehydrogenase; KEGG: bch:Bcen2424_6045 saccharopine dehydrogenase YP_001585492.1 PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C7474 ThiJ/PfpI family protein YP_001585493.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_001585494.1 PFAM: glycosyl transferase family 9; KEGG: tbd:Tbd_0737 glycosyl transferase probable ADP-heptose:LPS heptosyltransferase YP_001585495.1 PFAM: glycosyl transferase family 2; KEGG: eba:ebA7025 hypothetical protein YP_001585496.1 PFAM: glycosyl transferase family 9; KEGG: azo:azo1721 heptosyltransferase YP_001585497.1 PFAM: MgtC/SapB transporter; KEGG: bam:Bamb_6538 MgtC/SapB transporter YP_001585498.1 PFAM: CBS domain containing protein; KEGG: bch:Bcen2424_6583 CBS domain containing protein YP_001585499.1 KEGG: bch:Bcen2424_6584 hypothetical protein YP_001585500.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bam:Bamb_6537 histidine kinase YP_001585501.1 KEGG: bvi:Bcep1808_5891 hypothetical protein YP_001585502.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_5892 short-chain dehydrogenase/reductase SDR YP_001585503.1 KEGG: bch:Bcen2424_5972 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001585505.1 KEGG: bam:Bamb_5676 hypothetical protein YP_001585506.1 KEGG: bvi:Bcep1808_7055 hypothetical protein YP_001585507.1 KEGG: bvi:Bcep1808_7056 hypothetical protein YP_001585508.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bvi:Bcep1808_7057 conjugal transfer protein TrbG/VirB9/CagX YP_001585509.1 PFAM: conjugation TrbI family protein; KEGG: bvi:Bcep1808_7058 conjugation TrbI family protein YP_001585510.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7059 lytic transglycosylase, catalytic YP_001585511.1 KEGG: bvi:Bcep1808_7060 hypothetical protein YP_001585512.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7061 lytic transglycosylase, catalytic YP_001585513.1 KEGG: bvi:Bcep1808_7062 hypothetical protein YP_001585514.1 KEGG: bvi:Bcep1808_7063 type II secretory pathway component PulD-like protein YP_001585515.1 KEGG: bvi:Bcep1808_7064 hypothetical protein YP_001585516.1 KEGG: bvi:Bcep1808_7065 hypothetical protein YP_001585517.1 PFAM: type II secretion system protein E; KEGG: bvi:Bcep1808_7066 type II secretion system protein E YP_001585518.1 PFAM: type II secretion system protein; KEGG: bvi:Bcep1808_7067 hypothetical protein YP_001585519.1 KEGG: bvi:Bcep1808_7068 hypothetical protein YP_001585520.1 KEGG: bvi:Bcep1808_7069 hypothetical protein YP_001585521.1 KEGG: bvi:Bcep1808_7070 hypothetical protein YP_001585522.1 PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bam:Bamb_6206 HMG-I and HMG-Y, DNA-binding domain protein YP_001585523.1 PFAM: Integrase catalytic region; KEGG: bam:Bamb_2714 integrase, catalytic region YP_001585524.1 PFAM: SCP-like extracellular; KEGG: bvi:Bcep1808_7071 allergen V5/TPX-1 related YP_001585525.1 KEGG: bvi:Bcep1808_7072 hypothetical protein YP_001585527.1 KEGG: bvi:Bcep1808_7073 hypothetical protein YP_001585528.1 KEGG: bvi:Bcep1808_7074 hypothetical protein YP_001585529.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001585530.1 PFAM: NERD domain protein; KEGG: bvi:Bcep1808_7075 NERD domain protein YP_001585531.1 KEGG: bvi:Bcep1808_7077 hypothetical protein YP_001585532.1 KEGG: bvi:Bcep1808_7078 hypothetical protein YP_001585533.1 KEGG: bvi:Bcep1808_7079 hypothetical protein YP_001585534.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bvi:Bcep1808_7080 single-strand binding protein YP_001585535.1 KEGG: bvi:Bcep1808_7082 hypothetical protein YP_001585536.1 KEGG: bvi:Bcep1808_7083 hypothetical protein YP_001585538.1 KEGG: bvi:Bcep1808_7085 hypothetical protein YP_001585539.1 KEGG: bvi:Bcep1808_7086 hypothetical protein YP_001585540.1 KEGG: bvi:Bcep1808_7087 hypothetical protein YP_001585541.1 PFAM: helix-turn-helix Fis-type; KEGG: bvi:Bcep1808_7088 transcriptional regulator, fis family YP_001585542.1 KEGG: bvi:Bcep1808_2140 ankyrin YP_001585543.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001585544.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ftw:FTW_1215 cold shock DNA -binding domain protein YP_001585545.1 KEGG: bvi:Bcep1808_7089 hypothetical protein YP_001585547.1 KEGG: bvi:Bcep1808_7090 hypothetical protein YP_001585550.1 KEGG: bvi:Bcep1808_7092 hypothetical protein YP_001585551.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bvi:Bcep1808_7093 ParB-like partition protein YP_001585552.1 KEGG: bvi:Bcep1808_7094 hypothetical protein YP_001585553.1 KEGG: bvi:Bcep1808_7095 hypothetical protein YP_001585554.1 KEGG: bvi:Bcep1808_7096 hypothetical protein YP_001585555.1 KEGG: bvi:Bcep1808_7097 hypothetical protein YP_001585556.1 KEGG: bvi:Bcep1808_7098 hypothetical protein YP_001585557.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bvi:Bcep1808_7099 UBA/ThiF-type NAD/FAD binding protein YP_001585558.1 KEGG: bvi:Bcep1808_7101 outer membrane lipoprotein transmembrane YP_001585559.1 KEGG: bvi:Bcep1808_7102 hypothetical protein YP_001585560.1 KEGG: bvi:Bcep1808_7103 hypothetical protein YP_001585561.1 KEGG: bvi:Bcep1808_7104 hypothetical protein YP_001585562.1 KEGG: bvi:Bcep1808_7105 hypothetical protein YP_001585563.1 KEGG: bvi:Bcep1808_7106 hypothetical protein YP_001585564.1 KEGG: bvi:Bcep1808_7107 hypothetical protein YP_001585565.1 KEGG: bvi:Bcep1808_7108 ATPase YP_001585566.1 KEGG: bvi:Bcep1808_7109 hypothetical protein YP_001585567.1 KEGG: bvi:Bcep1808_7110 hypothetical protein YP_001585568.1 PFAM: type II secretion system protein E; KEGG: bvi:Bcep1808_7111 type II secretion system protein E YP_001585569.1 KEGG: bvi:Bcep1808_7112 hypothetical protein YP_001585570.1 KEGG: bvi:Bcep1808_7113 hypothetical protein YP_001585571.1 KEGG: bvi:Bcep1808_7114 type IV secretory pathway VirB4 components-like protein YP_001585572.1 KEGG: bvi:Bcep1808_7115 hypothetical protein YP_001585573.1 KEGG: bvi:Bcep1808_7116 hypothetical protein YP_001585574.1 KEGG: bvi:Bcep1808_7117 hypothetical protein YP_001585575.1 KEGG: bvi:Bcep1808_7118 hypothetical protein YP_001585576.1 KEGG: bvi:Bcep1808_7119 hypothetical protein YP_001585578.1 KEGG: bvi:Bcep1808_7120 hypothetical protein YP_001585579.1 KEGG: bvi:Bcep1808_7121 hypothetical protein YP_001585580.1 KEGG: bvi:Bcep1808_7122 UvrD/REP helicase YP_001585581.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001585582.1 PFAM: regulatory protein GntR HTH; KEGG: cvi:CV_1900 probable transcriptional regulator YP_001585583.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bam:Bamb_6454 phenazine biosynthesis protein PhzF family YP_001585584.1 KEGG: bur:Bcep18194_C6590 transposase Tn3 YP_001585585.1 KEGG: bch:Bcen2424_6928 hypothetical protein YP_001585586.1 KEGG: stm:STM3291 cytoplasmic protein YP_001585587.1 KEGG: xom:XOO_2068 hypothetical protein YP_001585588.1 PFAM: Integrase catalytic region; KEGG: rme:Rmet_1668 transposase and inactivated derivatives-like protein YP_001585589.1 KEGG: har:HEAR2032 excinuclease ABC subunit A2 UvrA YP_001585590.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001585591.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_7618 IstB domain protein ATP-binding protein YP_001585592.1 KEGG: har:HEAR2032 excinuclease ABC subunit A2 UvrA YP_001585593.1 KEGG: har:HEAR2037 hypothetical protein YP_001585594.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: har:HEAR2038 enzyme YP_001585595.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: har:HEAR2039 alcohol dehydrogenase class III (glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) YP_001585596.1 PFAM: protein of unknown function DUF156; KEGG: har:HEAR2040 hypothetical protein YP_001585597.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_4578 short-chain dehydrogenase/reductase SDR YP_001585598.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bvi:Bcep1808_6264 transposase IS116/IS110/IS902 family protein YP_001585599.1 KEGG: har:HEAR2032 excinuclease ABC subunit A2 UvrA YP_001585600.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfo:Pfl_2299 zinc-containing alcohol dehydrogenase superfamily YP_001585601.1 SMART: regulatory protein ArsR; KEGG: ppu:PP_2484 transcriptional regulator, ArsR family YP_001585602.1 PFAM: luciferase family protein; KEGG: ppu:PP_2485 hypothetical protein YP_001585603.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ppu:PP_2486 NADH-dependent flavin oxidoreductase, Oye family YP_001585604.1 KEGG: mca:MCA0907 ISMca2, transposase, OrfB YP_001585605.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ppf:Pput_2719 alcohol dehydrogenase. zinc-binding type 1 YP_001585606.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppf:Pput_2720 transcriptional regulator, LysR family YP_001585607.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_A2683 hypothetical protein YP_001585608.1 PFAM: transposase IS4 family protein; KEGG: aav:Aave_3460 transposase, IS4 family protein YP_001585609.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: neu:NE2511 AraC type helix-turn-helix:ThiJ/PfpI family YP_001585610.1 KEGG: neu:NE2512 hypothetical protein YP_001585611.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_5525 integrase, catalytic region YP_001585612.1 PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase YP_001585613.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_4315 IstB domain protein ATP-binding protein YP_001585614.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bam:Bamb_6382 histone family protein nucleoid-structuring protein H-NS YP_001585615.1 KEGG: bam:Bamb_6383 hypothetical protein YP_001585617.1 SMART: helix-turn-helix domain protein; KEGG: bam:Bamb_0139 transcriptional regulator, XRE family YP_001585618.1 KEGG: bam:Bamb_0140 hypothetical protein YP_001585619.1 PFAM: AAA-4 family protein; KEGG: sbm:Shew185_0048 transcriptional regulator YP_001585620.1 KEGG: rha:RHA1_ro08602 transposase YP_001585621.1 KEGG: bvi:Bcep1808_7149 hypothetical protein YP_001585622.1 KEGG: bvi:Bcep1808_7458 hypothetical protein YP_001585623.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bvi:Bcep1808_7459 phage integrase family protein YP_001585624.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_5560 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001585625.1 KEGG: bvi:Bcep1808_5559 hypothetical protein YP_001585626.1 KEGG: bvi:Bcep1808_4680 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_001585627.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: bvi:Bcep1808_4681 arsenical resistance operon trans-acting repressor ArsD YP_001585628.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C6565 NADPH-dependent FMN reductase YP_001585629.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ajs:Ajs_1283 arsenate reductase YP_001585630.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_C6563 arsenate-sodium symporter YP_001585631.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_C6562 protein tyrosine phosphatase YP_001585632.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: ajs:Ajs_1281 protein tyrosine phosphatase YP_001585633.1 PFAM: regulatory protein ArsR; KEGG: bch:Bcen2424_3194 transcriptional regulator, ArsR family YP_001585634.1 PFAM: regulatory protein ArsR; KEGG: psa:PST_0241 arsenic resistance transcriptional regulator YP_001585635.1 KEGG: gur:Gura_0475 ABC-type phosphate transport system periplasmic component-like protein YP_001585636.1 KEGG: rfr:Rfer_3084 arsenate reductase (azurin); TIGRFAM: arsenite oxidase, large subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001585637.1 TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: har:HEAR0479 arsenite oxidase small subunit precursor , Rieske type subunit, twin arginine translocation peptide YP_001585638.1 PFAM: protein of unknown function DUF302; KEGG: xau:Xaut_2890 protein of unknown function DUF302 YP_001585639.1 PFAM: cytochrome c class I; KEGG: ngo:NGO0101 cytochrome precursor YP_001585640.1 KEGG: pnu:Pnuc_1676 conserved secreted protein with internal repeats YP_001585641.1 PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7461 transposase Tn3 family protein YP_001585642.1 PFAM: nitrogen regulatory protein P-II; KEGG: bvi:Bcep1808_7182 nitrogen regulatory protein P-II YP_001585643.1 KEGG: bvi:Bcep1808_7177 efflux transporter, RND family, MFP subunit YP_001585644.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_7176 heavy metal efflux pump, CzcA family YP_001585645.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bvi:Bcep1808_7175 efflux transporter, RND family, MFP subunit YP_001585646.1 PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_7174 outer membrane efflux protein YP_001585647.1 KEGG: bvi:Bcep1808_7173 hypothetical protein YP_001585648.1 KEGG: mes:Meso_4582 hypothetical protein YP_001585649.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2141 transposase, IS4 family protein YP_001585653.1 KEGG: bvi:Bcep1808_5567 hypothetical protein YP_001585654.1 KEGG: bvi:Bcep1808_7337 hypothetical protein YP_001585655.1 toxin of the ChpB-ChpS toxin-antitoxin system YP_001585656.1 PFAM: SpoVT/AbrB domain protein; KEGG: bvi:Bcep1808_7445 transcriptional regulator/antitoxin, MazE YP_001585657.1 PFAM: integrase family protein; KEGG: eba:p1B207 site-specific recombinase YP_001585658.1 SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: bch:Bcen2424_6900 histone family protein nucleoid-structuring protein H-NS YP_001585659.1 KEGG: bch:Bcen2424_6868 uncharacterized conserved protein YP_001585660.1 KEGG: har:HEAR0479 arsenite oxidase small subunit precursor , Rieske type subunit, twin arginine translocation peptide; TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein YP_001585661.1 KEGG: rfr:Rfer_3084 arsenate reductase (azurin); TIGRFAM: arsenite oxidase, large subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001585662.1 PFAM: regulatory protein ArsR; KEGG: bch:Bcen2424_3194 transcriptional regulator, ArsR family YP_001585663.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpm:BURPS1710b_A0455 glyoxalase family protein family YP_001585664.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: har:HEAR1963 arsenate reductase YP_001585665.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_C6562 protein tyrosine phosphatase YP_001585666.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_C6563 arsenate-sodium symporter YP_001585667.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_C6564 arsenate reductase YP_001585668.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C6565 NADPH-dependent FMN reductase YP_001585669.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6566 GCN5-related N-acetyltransferase YP_001585670.1 KEGG: psp:PSPPH_1146 TetR family transcriptional regulator-like protein YP_001585671.1 KEGG: pap:PSPA7_0097 site-specific recombinase, phage integrase family protein YP_001585672.1 KEGG: bvi:Bcep1808_7152 hypothetical protein YP_001585673.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0125 integrase, catalytic region YP_001585674.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0126 transposase-associated ATP-binding protein YP_001585675.1 KEGG: bvi:Bcep1808_6215 hypothetical protein YP_001585676.1 PFAM: integrase family protein; KEGG: psp:PSPPH_1149 site-specific recombinase, phage integrase family YP_001585677.1 KEGG: net:Neut_2619 hypothetical protein YP_001585679.1 KEGG: bur:Bcep18194_C6630 hypothetical protein YP_001585681.1 PFAM: Integrase catalytic region; KEGG: ajs:Ajs_0907 integrase, catalytic region YP_001585682.1 KEGG: gox:GOX2598 DNA polymerase III alpha subunit YP_001585683.1 KEGG: rha:RHA1_ro08602 transposase YP_001585685.1 PFAM: transposase mutator type; KEGG: sme:SMc03982 transposase for insertion sequence element ISRM5 YP_001585686.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bvi:Bcep1808_0451 rhs element Vgr protein YP_001585687.1 KEGG: bvi:Bcep1808_7521 hypothetical protein YP_001585688.1 PFAM: integrase family protein; KEGG: bch:Bcen2424_6605 phage integrase family protein YP_001585689.1 KEGG: bvi:Bcep1808_7613 transposase IS3/IS911 family protein YP_001585693.1 KEGG: bch:Bcen2424_6881 transcriptional regulator, XRE family YP_001585695.1 PFAM: transposase IS4 family protein; KEGG: reu:Reut_D6468 transposase, IS4 YP_001585696.1 KEGG: bpd:BURPS668_A1705 IS6 family transposase YP_001585697.1 KEGG: bvi:Bcep1808_6179 hypothetical protein YP_001585698.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_4271 transposase, mutator type YP_001585699.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_6178 transposase, IS4 family protein YP_001585700.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_001585701.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bvi:Bcep1808_6176 acetate kinase YP_001585702.1 catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs YP_001585703.1 KEGG: bvi:Bcep1808_6174 hypothetical protein YP_001585704.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_6173 RND efflux system, outer membrane lipoprotein, NodT family YP_001585705.1 PFAM: ABC-2 type transporter; KEGG: bvi:Bcep1808_6172 ABC-2 type transporter YP_001585706.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6171 ABC transporter related YP_001585707.1 PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_6170 secretion protein HlyD family protein YP_001585708.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_6169 helix-turn-helix-domain containing protein, AraC type YP_001585709.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_6168 helix-turn-helix-domain containing protein, AraC type YP_001585710.1 PFAM: acetate and butyrate kinase; KEGG: bvi:Bcep1808_6166 acetate kinase YP_001585711.1 KEGG: bvi:Bcep1808_6165 hypothetical protein YP_001585712.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_6164 acetoacetyl-CoA reductase YP_001585713.1 KEGG: bvi:Bcep1808_6163 hypothetical protein YP_001585714.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_5525 integrase, catalytic region YP_001585715.1 KEGG: rso:RS02142 probable remnant of a transposase gene protein YP_001585716.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_6158 cytochrome c, class I YP_001585717.1 PFAM: cytochrome c oxidase subunit I; KEGG: bvi:Bcep1808_6157 cytochrome c oxidase, subunit I YP_001585718.1 PFAM: cytochrome c oxidase subunit II; KEGG: bvi:Bcep1808_6156 cytochrome c oxidase, subunit II YP_001585719.1 KEGG: bvi:Bcep1808_6155 hypothetical protein YP_001585720.1 PFAM: cytochrome c class I; KEGG: bvi:Bcep1808_6154 cytochrome c, class I YP_001585721.1 KEGG: bvi:Bcep1808_6153 cytochrome c4 YP_001585722.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bvi:Bcep1808_6152 two component transcriptional regulator, LuxR family YP_001585723.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bvi:Bcep1808_6150 histone family protein nucleoid-structuring protein H-NS YP_001585724.1 PFAM: response regulator receiver; KEGG: ana:all0182 two-component hybrid sensor and regulator YP_001585725.1 KEGG: bvi:Bcep1808_6148 hypothetical protein YP_001585726.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bvi:Bcep1808_6146 protein of unknown function DUF125, transmembrane YP_001585727.1 KEGG: bvi:Bcep1808_6348 hypothetical protein YP_001585728.1 KEGG: bvi:Bcep1808_6190 hypothetical protein YP_001585729.1 KEGG: bte:BTH_II0362 succinate dehydrogenase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin YP_001585730.1 KEGG: bte:BTH_II0366 transposase YP_001585731.1 KEGG: bvi:Bcep1808_7046 hypothetical protein YP_001585732.1 KEGG: mms:mma_1712 hypothetical protein YP_001585733.1 PFAM: Integrase catalytic region; KEGG: bpm:BURPS1710b_A0151 hypothetical protein YP_001585734.1 KEGG: mms:mma_1710 hypothetical protein YP_001585735.1 PFAM: transposase IS4 family protein; KEGG: reu:Reut_C5936 transposase, IS4 YP_001585736.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: xau:Xaut_2984 type III restriction protein res subunit YP_001585737.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_7618 IstB domain protein ATP-binding protein YP_001585738.1 KEGG: bvi:Bcep1808_7617 integrase, catalytic region YP_001585739.1 KEGG: aau:AAur_pTC10224 IS1071, transposase YP_001585740.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_2078 transposase and inactivated derivatives-like protein YP_001585741.1 PFAM: transposase Tn3 family protein; KEGG: aau:AAur_pTC10224 IS1071, transposase YP_001585742.1 PFAM: porin Gram-negative type; KEGG: reh:H16_A1551 outer membrane protein (porin) YP_001585743.1 KEGG: reu:Reut_A1626 hypothetical protein YP_001585744.1 PFAM: integrase family protein; KEGG: reu:Reut_A1625 phage integrase:phage integrase, N-terminal SAM-like YP_001585745.1 PFAM: transposase Tn3 family protein; KEGG: mfa:Mfla_1495 transposase Tn3 YP_001585746.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: xcv:XCVc0036 hypothetical protein YP_001585747.1 KEGG: art:Arth_4414 hypothetical protein YP_001585748.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: art:Arth_4415 permease for cytosine/purines, uracil, thiamine, allantoin YP_001585749.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: art:Arth_4416 transcriptional regulator, GntR family YP_001585750.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: azo:azo1016 L-lactate dehydrogenase YP_001585751.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: pna:Pnap_3472 L-lactate transport YP_001585752.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family YP_001585753.1 PFAM: transposase Tn3 family protein; KEGG: bur:Bcep18194_C6590 transposase Tn3 YP_001585754.1 KEGG: bxe:Bxe_A1967 multidrug efflux pump, RND family, AcrB/AcrD/AcrF subfamily YP_001585755.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1966 RND efflux system, outer membrane lipoprotein, NodT family YP_001585756.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: rme:Rmet_4089 hypothetical protein YP_001585757.1 PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A4000 paraquat-inducible protein YP_001585758.1 PFAM: protein of unknown function DUF330; KEGG: bpm:BURPS1710b_3383 hypothetical protein YP_001585759.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_5773 transcriptional regulator, TetR family YP_001585760.1 PFAM: monooxygenase FAD-binding; KEGG: bch:Bcen2424_5774 monooxygenase, FAD-binding YP_001585761.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bch:Bcen2424_5775 glyoxalase/bleomycin resistance protein/dioxygenase YP_001585762.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_5776 fumarylacetoacetate (FAA) hydrolase YP_001585763.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1398 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_001585764.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bch:Bcen2424_3472 transposase IS116/IS110/IS902 family protein YP_001585765.1 KEGG: bch:Bcen2424_5777 AMP-dependent synthetase and ligase YP_001585766.1 PFAM: OmpW family protein; KEGG: bur:Bcep18194_A3497 OmpW family protein YP_001585767.1 PFAM: regulatory protein TetR; KEGG: bte:BTH_I2290 transcriptional regulator, TetR family YP_001585768.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr2694 VirG-like two component response regulator YP_001585769.1 KEGG: sfu:Sfum_2943 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001585770.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bja:bll0283 cytochrome bd-I oxidase subunit I YP_001585771.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bja:bll0282 cytochrome bd-I oxidase subunit II YP_001585772.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bvi:Bcep1808_6273 protein of unknown function DUF224, cysteine-rich region domain protein YP_001585773.1 PFAM: protein of unknown function DUF162; KEGG: bvi:Bcep1808_6272 protein of unknown function DUF162 YP_001585774.1 PFAM: protein of unknown function DUF162; KEGG: bvi:Bcep1808_6271 protein of unknown function DUF162 YP_001585775.1 KEGG: bvi:Bcep1808_6270 membrane protein-like protein YP_001585776.1 PFAM: protein of unknown function DUF330; KEGG: bvi:Bcep1808_5629 protein of unknown function DUF330 YP_001585777.1 PFAM: Mammalian cell entry related domain protein; KEGG: bvi:Bcep1808_5628 mammalian cell entry related domain protein YP_001585778.1 PFAM: Paraquat-inducible protein A; KEGG: bvi:Bcep1808_5627 paraquat-inducible protein A YP_001585779.1 PFAM: Lipocalin family protein; KEGG: bvi:Bcep1808_5913 lipocalin family protein YP_001585780.1 PFAM: protein of unknown function DUF1295; KEGG: bvi:Bcep1808_5910 protein of unknown function DUF1295 YP_001585781.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bvi:Bcep1808_5909 methyltransferase type 11 YP_001585782.1 PFAM: Lipocalin family protein; KEGG: bvi:Bcep1808_5908 lipocalin family protein YP_001585783.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_5907 amine oxidase YP_001585784.1 PFAM: protein of unknown function DUF1365; KEGG: bvi:Bcep1808_5906 protein of unknown function DUF1365 YP_001585785.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bvi:Bcep1808_5905 cyclopropane-fatty-acyl-phospholipid synthase YP_001585786.1 KEGG: bvi:Bcep1808_5904 hypothetical protein YP_001585787.1 KEGG: maq:Maqu_3104 hypothetical protein YP_001585788.1 KEGG: bvi:Bcep1808_5902 hypothetical protein YP_001585789.1 PFAM: GTP cyclohydrolase I; KEGG: bvi:Bcep1808_5901 GTP cyclohydrolase I YP_001585790.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bvi:Bcep1808_5900 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001585792.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001585793.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001585794.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bvi:Bcep1808_4411 succinate dehydrogenase, cytochrome b subunit YP_001585795.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bch:Bcen2424_3934 succinate dehydrogenase, cytochrome b subunit YP_001585796.1 KEGG: psb:Psyr_2639 hypothetical protein YP_001585797.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sru:SRU_2037 oxidoreductase, short chain dehydrogenase/reductase family YP_001585798.1 PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_5899 FAD dependent oxidoreductase YP_001585800.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: bvi:Bcep1808_5898 deoxyribodipyrimidine photolyase-related protein YP_001585801.1 PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 transcriptional regulator, MerR family YP_001585802.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bvi:Bcep1808_5896 alpha/beta hydrolase fold-3 domain protein YP_001585803.1 KEGG: bur:Bcep18194_C6579 hypothetical protein YP_001585804.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bvi:Bcep1808_5895 deoxyribodipyrimidine photo-lyase YP_001585805.1 KEGG: aav:Aave_4033 hypothetical protein YP_001585806.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_001585807.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_4035 transcriptional regulator, LysR family YP_001585808.1 KEGG: bur:Bcep18194_C6581 cyclopropane-fatty-acyl-phospholipid synthase YP_001585809.1 KEGG: bvi:Bcep1808_5902 hypothetical protein YP_001585810.1 KEGG: bvi:Bcep1808_5897 transcriptional regulator, MerR family YP_001585811.1 PFAM: protein of unknown function DUF1275; KEGG: rso:RS00757 probable transmembrane protein YP_001585813.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_6292 UspA domain protein YP_001585814.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Hemerythrin HHE cation binding domain protein; KEGG: bvi:Bcep1808_6293 heavy metal translocating P-type ATPase YP_001585815.1 KEGG: bvi:Bcep1808_6294 hypothetical protein YP_001585816.1 KEGG: bvi:Bcep1808_6297 hypothetical protein YP_001585817.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_6298 multi-sensor signal transduction histidine kinase YP_001585818.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_6298 multi-sensor signal transduction histidine kinase YP_001585819.1 PFAM: cytochrome B561; KEGG: bvi:Bcep1808_6299 cytochrome b561 YP_001585820.1 PFAM: multihaem cytochrome; KEGG: bvi:Bcep1808_6300 diheme cytochrome c YP_001585821.1 PFAM: Domain of unknown function DUF1924; KEGG: bvi:Bcep1808_6301 cytochrome c, monohaem YP_001585822.1 PFAM: beta-lactamase; conserved hypothetical protein; KEGG: bvi:Bcep1808_6303 uncharacterised conserved protein UCP016719 YP_001585823.1 KEGG: bvi:Bcep1808_6304 hypothetical protein YP_001585824.1 KEGG: bvi:Bcep1808_6306 hypothetical protein YP_001585825.1 KEGG: bvi:Bcep1808_6307 hypothetical protein YP_001585826.1 PFAM: polysaccharide deacetylase; KEGG: bvi:Bcep1808_6308 polysaccharide deacetylase YP_001585827.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: bvi:Bcep1808_6309 PfkB domain protein YP_001585828.1 class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides YP_001585829.1 KEGG: bvi:Bcep1808_6311 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001585830.1 KEGG: bvi:Bcep1808_6312 hypothetical protein YP_001585831.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bvi:Bcep1808_6313 transport-associated YP_001585832.1 KEGG: bam:Bamb_3823 hypothetical protein YP_001585833.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_6315 RND efflux system, outer membrane lipoprotein, NodT family YP_001585834.1 PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_6316 secretion protein HlyD family protein YP_001585835.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6317 ABC transporter related YP_001585836.1 PFAM: ABC-2 type transporter; KEGG: bvi:Bcep1808_6318 ABC-2 type transporter YP_001585837.1 KEGG: bam:Bamb_3823 hypothetical protein YP_001585838.1 PFAM: protein of unknown function DUF214; KEGG: bvi:Bcep1808_6320 protein of unknown function DUF214 YP_001585839.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6321 ABC transporter related YP_001585840.1 PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_6322 secretion protein HlyD family protein YP_001585841.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_6323 RND efflux system, outer membrane lipoprotein, NodT family YP_001585842.1 KEGG: bvi:Bcep1808_6324 hypothetical protein YP_001585843.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bam:Bamb_6526 beta-lactamase domain protein YP_001585844.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3822 alcohol dehydrogenase GroES domain protein YP_001585845.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: bam:Bamb_3821 phosphate butyryltransferase YP_001585846.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bam:Bamb_3820 poly-beta-hydroxybutyrate polymerase domain protein YP_001585847.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3819 acetoacetyl-CoA reductase YP_001585848.1 KEGG: bam:Bamb_3818 hypothetical protein YP_001585849.1 PFAM: UspA domain protein; KEGG: bam:Bamb_3817 UspA domain protein YP_001585850.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bam:Bamb_3816 acetate kinase YP_001585851.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_6334 UspA domain protein YP_001585852.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_6335 UspA domain protein YP_001585853.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_6336 UspA domain protein YP_001585854.1 KEGG: bpl:BURPS1106A_A1550 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001585855.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bvi:Bcep1808_6337 two component transcriptional regulator, LuxR family YP_001585856.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bam:Bamb_3812 transcriptional regulator, Crp/Fnr family YP_001585857.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3811 alcohol dehydrogenase GroES domain protein YP_001585858.1 KEGG: bvi:Bcep1808_6340 hypothetical protein YP_001585859.1 KEGG: bvi:Bcep1808_6341 cytochrome c, class I YP_001585860.1 PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_6342 conserved hypothetical protein 730 YP_001585861.1 KEGG: bvi:Bcep1808_6343 hypothetical protein YP_001585862.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: bvi:Bcep1808_6344 sulphate transporter YP_001585863.1 KEGG: bvi:Bcep1808_4885 hypothetical protein YP_001585864.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bvi:Bcep1808_6350 transport-associated YP_001585865.1 KEGG: bvi:Bcep1808_6351 hypothetical protein YP_001585866.1 PFAM: heat shock protein Hsp20; KEGG: bvi:Bcep1808_6352 heat shock protein HSP20 YP_001585867.1 KEGG: bvi:Bcep1808_6353 periplasmic protein of unknown function, DUF1488 YP_001585868.1 PFAM: UspA domain protein; KEGG: bvi:Bcep1808_6354 UspA domain protein YP_001585869.1 KEGG: bvi:Bcep1808_6355 hypothetical protein YP_001585870.1 KEGG: bvi:Bcep1808_6356 hypothetical protein YP_001585871.1 PFAM: CBS domain containing protein; KEGG: bvi:Bcep1808_6357 signal-transduction protein with CBS domains YP_001585872.1 PFAM: Rhomboid family protein; KEGG: bps:BPSS1113 family S54 unassigned peptidase YP_001585873.1 KEGG: bvi:Bcep1808_6358 hypothetical protein YP_001585874.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_0934 ATP-binding transmembrane ABC transporter YP_001585875.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bte:BTH_I0622 ABC transporter, permease YP_001585876.1 KEGG: bxe:Bxe_A1895 hypothetical protein YP_001585877.1 KEGG: bte:BTH_II0918 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_001585878.1 KEGG: bte:BTH_II0917 hypothetical protein YP_001585879.1 TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: bpm:BURPS1710b_0939 nicotinate phosphoribosyltransferase YP_001585880.1 KEGG: bte:BTH_II1296 hypothetical protein YP_001585881.1 KEGG: bam:Bamb_3762 hypothetical protein YP_001585882.1 KEGG: bvi:Bcep1808_6360 hypothetical protein YP_001585883.1 PFAM: CBS domain containing protein; KEGG: bvi:Bcep1808_6361 signal-transduction protein with CBS domains YP_001585884.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_A1870 periplasmic phospholipid binding protein YP_001585886.1 KEGG: bvi:Bcep1808_6362 hypothetical protein YP_001585887.1 KEGG: bmn:BMA10247_2327 hypothetical protein YP_001585888.1 KEGG: bte:BTH_II1317 hypothetical protein YP_001585889.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Patatin; KEGG: bpd:BURPS668_A3204 pyridine nucleotide-disulfide oxidoreductase YP_001585890.1 KEGG: bxe:Bxe_B0391 flavodoxin YP_001585891.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bam:Bamb_1156 polyhydroxyalkanoate depolymerase, intracellular YP_001585892.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: reu:Reut_A1162 phosphoenolpyruvate synthase YP_001585893.1 KEGG: bvi:Bcep1808_5894 hypothetical protein YP_001585894.1 KEGG: spe:Spro_2201 isopentenyl-diphosphate delta-isomerase, type 1; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase YP_001585895.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: bvi:Bcep1808_4257 deoxyxylulose-5-phosphate synthase YP_001585896.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_6510 methyltransferase type 12 YP_001585897.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bch:Bcen2424_6510 methyltransferase type 12 YP_001585898.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_6508 Rieske (2Fe-2S) domain protein YP_001585899.1 KEGG: ret:RHE_PD00247 hypothetical protein YP_001585900.1 PFAM: cytochrome P450; KEGG: mlo:mlr6367 cytochrome P450 YP_001585901.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_6508 Rieske (2Fe-2S) domain protein YP_001585902.1 KEGG: shn:Shewana3_2029 hypothetical protein YP_001585903.1 PFAM: protein of unknown function DUF1016; KEGG: rso:RSc2621 hypothetical protein YP_001585904.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: bam:Bamb_6278 poly(3-hydroxybutyrate) depolymerase-like protein YP_001585905.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6513 major facilitator superfamily MFS_1 YP_001585906.1 KEGG: bam:Bamb_5983 hypothetical protein YP_001585907.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sen:SACE_6684 metabolite transporter, MFS superfamily YP_001585908.1 PFAM: ferredoxin; cytochrome P450; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: reh:H16_B1279 two domain protein: cytochrome P450 YP_001585909.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bte:BTH_II0724 transcriptional regulator, IclR family YP_001585910.1 membrane component of a sugar ABC transporter system YP_001585911.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_6195 inner-membrane translocator YP_001585912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_6194 ABC transporter related YP_001585913.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bch:Bcen2424_5992 periplasmic binding protein/LacI transcriptional regulator YP_001585914.1 PFAM: integrase family protein; KEGG: bam:Bamb_6192 DNA topoisomerase, type I YP_001585915.1 KEGG: bvi:Bcep1808_6554 coenzyme PQQ biosynthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001585916.1 PFAM: coenzyme PQQ synthesis D; KEGG: bvi:Bcep1808_6555 coenzyme PQQ synthesis D YP_001585917.1 Required in the synthesis of PPQ, but its exact function is unknown YP_001585918.1 possibly involved in transport of pyrroloquinoline quinone transport YP_001585919.1 PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; SMART: AAA ATPase; KEGG: bam:Bamb_6164 GAF modulated sigma54 specific transcriptional regulator, fis family YP_001585920.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6163 prolyl aminopeptidase YP_001585921.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bvi:Bcep1808_6560 TonB-dependent receptor YP_001585922.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: bam:Bamb_6162 pyrrolo-quinoline quinone YP_001585923.1 PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6161 cytochrome c, class I YP_001585924.1 PFAM: High potential iron-sulfur protein; KEGG: bam:Bamb_6160 high potential iron-sulfur protein YP_001585925.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: bam:Bamb_6159 RNA polymerase, sigma 28 subunit YP_001585926.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001585927.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_6157 porin, gram-negative type YP_001585928.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6155 general substrate transporter YP_001585929.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bur:Bcep18194_C7434 TRAP dicarboxylate transporter, DctM subunit YP_001585930.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bch:Bcen2424_6027 tripartite ATP-independent periplasmic transporter, DctQ component YP_001585931.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bvi:Bcep1808_6572 TRAP dicarboxylate transporter, DctP subunit YP_001585932.1 PFAM: glycoside hydrolase family 28; KEGG: bch:Bcen2424_6029 glycoside hydrolase, family 28 YP_001585933.1 KEGG: bvi:Bcep1808_6573 hypothetical protein YP_001585934.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_6574 transcriptional regulator, GntR family YP_001585936.1 KEGG: aor:AO090102000296 predicted protein YP_001585937.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6108 major facilitator superfamily MFS_1 YP_001585938.1 PFAM: dihydrodipicolinate synthetase; KEGG: bam:Bamb_6107 dihydrodipicolinate synthetase YP_001585939.1 KEGG: bch:Bcen2424_6031 hypothetical protein YP_001585940.1 PFAM: regulatory protein LuxR; KEGG: bbr:BB2323 transcriptional regulator YP_001585941.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_6105 transcriptional regulator, TetR family YP_001585942.1 KEGG: bam:Bamb_6104 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001585943.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_6063 transcriptional regulator, LysR family YP_001585944.1 PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_3404 FAD dependent oxidoreductase YP_001585945.1 KEGG: bvi:Bcep1808_3403 hypothetical protein YP_001585946.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_6066 BFD domain protein (2Fe-2S)-binding domain protein YP_001585947.1 PFAM: extracellular solute-binding protein family 3; KEGG: bvi:Bcep1808_3401 extracellular solute-binding protein, family 3 YP_001585948.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2701 transcriptional regulator, LysR family YP_001585949.1 PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2702 ABC spermidine/putrescine family transporter, periplasmic ligand binding protein YP_001585950.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2703 ABC spermidine/putrescine family transporter, ATPase subunit YP_001585951.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2704 ABC spermidine/putrescine family transporter, inner membrane subunit YP_001585952.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2705 ABC spermidine/putrescine family transporter, inner membrane subunit YP_001585953.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2706 FAD dependent oxidoreductase YP_001585954.1 KEGG: bxe:Bxe_B2707 hypothetical protein YP_001585955.1 PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2708 opine oxidase subunit A YP_001585956.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2709 hypothetical protein YP_001585957.1 PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_B2710 endoribonuclease L-PSP YP_001585958.1 PFAM: beta-lactamase; KEGG: bch:Bcen2424_6077 beta-lactamase YP_001585959.1 KEGG: bam:Bamb_6101 hypothetical protein YP_001585960.1 KEGG: bur:Bcep18194_C7538 hypothetical protein YP_001585961.1 KEGG: bch:Bcen2424_6085 hypothetical protein YP_001585962.1 PFAM: MlrC domain protein; KEGG: bch:Bcen2424_6086 MlrC domain protein YP_001585963.1 KEGG: bur:Bcep18194_C7545 hypothetical protein YP_001585964.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6096 betaine-aldehyde dehydrogenase YP_001585965.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_6095 aminotransferase class-III YP_001585966.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7548 amino acid transporter YP_001585967.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7549 transcriptional regulator, AraC family YP_001585968.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1487 transcriptional regulator, LysR family YP_001585969.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: msm:MSMEG_5653 cytosine/purine/uracil/thiamine/allantoin permease family protein YP_001585970.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pen:PSEEN2130 dioxygenase, alpha subunit YP_001585971.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B0833 succinic semialdehyde dehydrogenase YP_001585972.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN2129 dioxygenase, beta subunit YP_001585973.1 KEGG: reu:Reut_B5837 PAS; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001585974.1 KEGG: azo:azo3860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001585975.1 KEGG: bch:Bcen2424_6103 hypothetical protein YP_001585976.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bch:Bcen2424_6104 transcriptional regulator, MarR family with acetyltransferase activity YP_001585977.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_6063 porin, gram-negative type YP_001585978.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4438 transcriptional regulator, LysR family YP_001585979.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: bch:Bcen2424_5030 N-acyl-D-amino-acid deacylase YP_001585980.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4440 major facilitator superfamily MFS_1 YP_001585981.1 PFAM: Amidase; KEGG: bam:Bamb_4441 amidase YP_001585982.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0179 transcriptional regulator, IclR family YP_001585983.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_2236 general substrate transporter YP_001585984.1 PFAM: porin Gram-negative type; KEGG: bte:BTH_II1504 outer membrane porin OpcP YP_001585985.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7566 outer membrane protein (porin) YP_001585986.1 PFAM: Tannase and feruloyl esterase; KEGG: bur:Bcep18194_C7567 feruloyl esterase YP_001585987.1 KEGG: bur:Bcep18194_C7568 ABC molybdate transporter, periplasmic ligand binding protein YP_001585988.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: bur:Bcep18194_C7569 hypothetical protein YP_001585989.1 PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_C7570 amidohydrolase 2 YP_001585990.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7571 major facilitator superfamily, (MFS_1) family YP_001585991.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway YP_001585992.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7575 transcriptional regulator, LysR family YP_001585993.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7578 major facilitator superfamily, (MFS_1) family YP_001585994.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bvi:Bcep1808_6594 histone family protein nucleoid-structuring protein H-NS YP_001585995.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bam:Bamb_6087 dTDP-4-dehydrorhamnose reductase YP_001585996.1 PFAM: DoxX family protein; KEGG: bvi:Bcep1808_6596 DoxX family protein YP_001585997.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_6590 binding-protein-dependent transport systems inner membrane component YP_001585998.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6589 ABC transporter related YP_001585999.1 KEGG: bch:Bcen2424_6588 ABC transporter substrate binding protein YP_001586000.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bam:Bamb_6536 taurine dioxygenase YP_001586001.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_C7626 cobalamin synthesis protein/P47K YP_001586002.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_C7627 amidohydrolase-like YP_001586003.1 PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_C7628 Na+/solute symporter YP_001586004.1 KEGG: bur:Bcep18194_C7629 hypothetical protein YP_001586005.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6079 transcriptional regulator, LysR family YP_001586006.1 PFAM: Pirin domain protein; KEGG: bch:Bcen2424_6130 pirin domain protein domain protein YP_001586007.1 stationary phase that binds TrpR repressor YP_001586008.1 KEGG: bur:Bcep18194_C7635 hypothetical protein YP_001586009.1 PFAM: LrgB family protein; KEGG: bur:Bcep18194_C7636 LrgB-like protein YP_001586010.1 PFAM: LrgA family protein; KEGG: bur:Bcep18194_C7637 LrgA YP_001586011.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_A4484 iron-containing alcohol dehydrogenase YP_001586013.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bch:Bcen2424_6135 alpha/beta hydrolase fold-3 domain protein YP_001586014.1 PFAM: OsmC family protein; KEGG: bur:Bcep18194_C7670 OsmC-like protein YP_001586015.1 PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_6608 transcriptional regulator, TetR family YP_001586016.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_6140 ABC transporter related YP_001586017.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_5219 porin, gram-negative type YP_001586018.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_5218 Rieske (2Fe-2S) domain protein YP_001586019.1 PFAM: YCII-related; KEGG: bam:Bamb_5217 YCII-related YP_001586020.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bam:Bamb_5216 intradiol ring-cleavage dioxygenase YP_001586021.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bam:Bamb_5215 iron-containing alcohol dehydrogenase YP_001586022.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_5214 betaine-aldehyde dehydrogenase YP_001586023.1 KEGG: bam:Bamb_5213 hypothetical protein YP_001586024.1 KEGG: bam:Bamb_5212 hypothetical protein YP_001586025.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5211 transcriptional regulator, LysR family YP_001586026.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5210 major facilitator superfamily MFS_1 YP_001586028.1 PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7685 outer membrane protein (porin) YP_001586029.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_6057 extracellular ligand-binding receptor YP_001586030.1 KEGG: bch:Bcen2424_6149 hypothetical protein YP_001586031.1 PFAM: FAD linked oxidase domain protein; KEGG: bam:Bamb_6039 FAD linked oxidase domain protein YP_001586032.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6038 transcriptional regulator, LysR family YP_001586033.1 KEGG: bch:Bcen2424_5949 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001586035.1 TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: ppf:Pput_2615 YD repeat protein YP_001586036.1 PFAM: Domain of unknown function DUF1795; KEGG: stm:STM0290 cytoplasmic protein YP_001586037.1 KEGG: bur:Bcep18194_B2578 hypothetical protein YP_001586038.1 PFAM: Ankyrin; KEGG: bvi:Bcep1808_5264 ankyrin YP_001586039.1 KEGG: bja:bll5462 hypothetical metabolite transport protein YP_001586040.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bch:Bcen2424_6050 methyl-accepting chemotaxis sensory transducer YP_001586041.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B1619 transcriptional regulator, LuxR family YP_001586043.1 PFAM: phosphoesterase; KEGG: bam:Bamb_5381 phosphoesterase YP_001586044.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMb20215 transcriptional regulator protein YP_001586045.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A1620 major facilitator superfamily MFS_1 YP_001586046.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_6384 alkylhydroperoxidase like protein, AhpD family YP_001586047.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bam:Bamb_4044 cupin 2, conserved barrel domain protein YP_001586048.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_4416 glyoxalase/bleomycin resistance protein/dioxygenase YP_001586049.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo0011 short-chain dehydrogenase family protein YP_001586050.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo0012 transcriptional regulator, LysR family YP_001586051.1 PFAM: luciferase family protein; KEGG: bch:Bcen2424_6154 luciferase family protein YP_001586052.1 PFAM: NADPH-dependent FMN reductase; KEGG: bch:Bcen2424_6155 FMN reductase YP_001586053.1 transports degraded pectin products into the bacterial cell YP_001586054.1 KEGG: reh:H16_B0318 hypothetical protein YP_001586055.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001586056.1 PFAM: regulatory protein DeoR; regulatory protein ArsR; KEGG: reh:H16_B0320 transcriptional regulator, DeoR-family YP_001586057.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5256 alpha/beta hydrolase fold YP_001586058.1 PFAM: regulatory protein MerR; KEGG: bch:Bcen2424_6757 transcriptional regulator, MerR family YP_001586059.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bps:BPSL1653 GntR-family regulatory protein YP_001586060.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_2208 spermidine/putrescine transport ATP-binding protein PotA YP_001586061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpm:BURPS1710b_2209 putrescine transport system permease PotI YP_001586062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpm:BURPS1710b_2210 ABC transporter, membrane spanning protein (polyamine) YP_001586063.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpm:BURPS1710b_2211 ABC transporter, substrate binding protein (polyamine) YP_001586064.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpm:BURPS1710b_2215 nitrilotriacetate monooxygenase YP_001586065.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bpm:BURPS1710b_2218 transcriptional regulator, GntR family YP_001586066.1 PFAM: protein of unknown function DUF1330; KEGG: aci:ACIAD2548 hypothetical protein YP_001586067.1 PFAM: protein of unknown function DUF1185; KEGG: aci:ACIAD2546 hypothetical protein YP_001586068.1 PFAM: alpha/beta hydrolase fold; KEGG: aci:ACIAD2545 conserved hypothetical protein; hydrolase YP_001586069.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: aci:ACIAD2544 conserved hypothetical protein; monooxygenase oxydoreductase YP_001586070.1 PFAM: luciferase family protein; KEGG: aci:ACIAD2543 conserved hypothetical protein; monooxygenase oxidoreductase YP_001586071.1 PFAM: Aldehyde Dehydrogenase; KEGG: aci:ACIAD2542 aldehyde dehydrogenase YP_001586072.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: aci:ACIAD2541 purine cytosine permease YP_001586073.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_4316 carboxymuconolactone decarboxylase YP_001586074.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4757 transcriptional regulator, LysR family YP_001586075.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bvi:Bcep1808_4752 shikimate 5-dehydrogenase YP_001586076.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bvi:Bcep1808_4753 formyl-CoA transferase YP_001586077.1 PFAM: MaoC domain protein dehydratase; KEGG: bam:Bamb_6530 MaoC domain protein dehydratase YP_001586078.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_6529 glyoxalase/bleomycin resistance protein/dioxygenase YP_001586079.1 KEGG: bch:Bcen2424_5892 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_001586080.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5605 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_001586081.1 TIGRFAM: CitB domain protein; KEGG: reh:H16_B0203 ferredoxin YP_001586082.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica YP_001586083.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_5608 transcriptional regulator, LysR family YP_001586084.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family YP_001586085.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_001586086.1 PFAM: aminotransferase class-III; KEGG: bam:Bamb_6024 aminotransferase class-III YP_001586087.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6023 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_001586088.1 TIGRFAM: ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bvi:Bcep1808_5461 succinylglutamate desuccinylase/aspartoacylase YP_001586089.1 TIGRFAM: ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: bam:Bamb_6020 peptidase M24 YP_001586090.1 cyclodeaminase YP_001586091.1 catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization YP_001586092.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_6017 transcriptional regulator, GntR family YP_001586093.1 PFAM: regulatory protein MarR; KEGG: bch:Bcen2424_6176 transcriptional regulator, MarR family YP_001586094.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bch:Bcen2424_6177 fusaric acid resistance protein conserved region YP_001586095.1 PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_C7723 protein of unknown function DUF1656 YP_001586096.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bch:Bcen2424_6179 efflux transporter, RND family, MFP subunit YP_001586097.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6012 RND efflux system, outer membrane lipoprotein, NodT family YP_001586098.1 PFAM: TOBE domain protein; KEGG: bch:Bcen2424_6181 molybdenum-pterin binding YP_001586099.1 PFAM: NifQ family protein; KEGG: bur:Bcep18194_C7727 hypothetical protein YP_001586100.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_6010 glyoxalase/bleomycin resistance protein/dioxygenase YP_001586101.1 PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: bvi:Bcep1808_5475 ProQ activator of osmoprotectant transporter ProP YP_001586102.1 KEGG: bam:Bamb_6007 hypothetical protein YP_001586103.1 PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bam:Bamb_6006 flavodoxin/nitric oxide synthase YP_001586104.1 PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_6188 transcriptional regulator, TetR family YP_001586105.1 KEGG: bch:Bcen2424_6189 Zn-dependent hydrolases of the beta-lactamase fold-like protein YP_001586106.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bam:Bamb_6002 cobyrinic acid a,c-diamide synthase YP_001586107.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bvi:Bcep1808_5482 ParB-like partition protein YP_001586108.1 KEGG: bam:Bamb_6000 hypothetical protein