-- dump date 20140619_001425 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 395963000001 SEQ_END SEQ_END NC_010578.1 66727 66727 DR NC_010578.1; contig end 66727..66727 Beijerinckia indica subsp. indica ATCC 9039 395963000002 SEQ_END SEQ_END NC_010580.1 181736 181736 DR NC_010580.1; contig end 181736..181736 Beijerinckia indica subsp. indica ATCC 9039 395963000003 SEQ_END SEQ_END NC_010581.1 4170153 4170153 DR NC_010581.1; contig end 4170153..4170153 Beijerinckia indica subsp. indica ATCC 9039 YP_001830894.1 CDS Bind_3876 NC_010578.1 580 1509 D KEGG: gdi:GDI2531 hypothetical protein; hypothetical protein 580..1509 Beijerinckia indica subsp. indica ATCC 9039 6197926 YP_001830895.1 CDS Bind_3877 NC_010578.1 1664 2749 R PFAM: glycosyl transferase family 9; KEGG: ppd:Ppro_2100 glycosyl transferase, family 9; glycosyl transferase family protein complement(1664..2749) Beijerinckia indica subsp. indica ATCC 9039 6197925 YP_001830896.1 CDS Bind_3878 NC_010578.1 2746 4068 R KEGG: rxy:Rxyl_0561 polysaccharide biosynthesis protein; O-antigen and teichoic acid-like export protein complement(2746..4068) Beijerinckia indica subsp. indica ATCC 9039 6197924 YP_001830897.1 CDS Bind_3879 NC_010578.1 4226 5533 R PFAM: glycosyl transferase group 1; KEGG: mva:Mvan_1684 glycosyl transferase, group 1; glycosyl transferase group 1 complement(4226..5533) Beijerinckia indica subsp. indica ATCC 9039 6197923 YP_001830898.1 CDS Bind_3880 NC_010578.1 6066 6209 D hypothetical protein 6066..6209 Beijerinckia indica subsp. indica ATCC 9039 6197922 YP_001830899.1 CDS Bind_3881 NC_010578.1 6437 7507 D PFAM: acyltransferase 3; KEGG: rle:RL0234 exopolysaccharide production protein ExoZ; acyltransferase 3 6437..7507 Beijerinckia indica subsp. indica ATCC 9039 6197921 YP_001830900.1 CDS Bind_3882 NC_010578.1 7998 10337 R TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase complement(7998..10337) Beijerinckia indica subsp. indica ATCC 9039 6197920 YP_001830901.1 CDS Bind_3883 NC_010578.1 10906 12132 D KEGG: rle:RL3831 putative O-acetyl transferase; putative O-acetyl transferase 10906..12132 Beijerinckia indica subsp. indica ATCC 9039 6197919 YP_001830902.1 CDS Bind_3884 NC_010578.1 12727 14580 D PFAM: Heparinase II/III family protein; KEGG: mva:Mvan_1686 heparinase II/III family protein; heparinase II/III family protein 12727..14580 Beijerinckia indica subsp. indica ATCC 9039 6197918 YP_001830903.1 CDS Bind_3885 NC_010578.1 14689 15951 R KEGG: bja:blr6296 probable GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(14689..15951) Beijerinckia indica subsp. indica ATCC 9039 6197917 YP_001830904.1 CDS Bind_3887 NC_010578.1 17753 18970 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_PA00180 plasmid partitioning protein RepAa1; cobyrinic acid ac-diamide synthase 17753..18970 Beijerinckia indica subsp. indica ATCC 9039 6197915 YP_001830905.1 CDS Bind_3888 NC_010578.1 18967 20076 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ret:RHE_PA00181 plasmid partitioning protein RepBa1; parB-like partition protein 18967..20076 Beijerinckia indica subsp. indica ATCC 9039 6197914 YP_001830906.1 CDS Bind_3889 NC_010578.1 20270 20704 D KEGG: gox:GOX2551 hypothetical protein; hypothetical protein 20270..20704 Beijerinckia indica subsp. indica ATCC 9039 6197913 YP_001830907.1 CDS Bind_3890 NC_010578.1 21264 22511 R KEGG: rpa:pRPA1 replication protein; replication protein complement(21264..22511) Beijerinckia indica subsp. indica ATCC 9039 6197912 YP_001830908.1 CDS Bind_3891 NC_010578.1 22914 24491 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: azc:AZC_3075 acetyl-CoA carboxylase; acetyl-CoA carboxylase, biotin carboxylase complement(22914..24491) Beijerinckia indica subsp. indica ATCC 9039 6197911 YP_001830909.1 CDS Bind_3892 NC_010578.1 24719 25777 R PFAM: secretion protein HlyD family protein; KEGG: rpe:RPE_3322 secretion protein HlyD family protein; secretion protein HlyD family protein complement(24719..25777) Beijerinckia indica subsp. indica ATCC 9039 6197910 YP_001830910.1 CDS Bind_3893 NC_010578.1 25774 26502 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_3321 ABC transporter related; ABC transporter related complement(25774..26502) Beijerinckia indica subsp. indica ATCC 9039 6197909 YP_001830911.1 CDS Bind_3894 NC_010578.1 26499 27707 R PFAM: protein of unknown function DUF214; KEGG: rpe:RPE_3320 protein of unknown function DUF214; hypothetical protein complement(26499..27707) Beijerinckia indica subsp. indica ATCC 9039 6197908 YP_001830912.1 CDS Bind_3895 NC_010578.1 27966 29342 R PFAM: glycosyl transferase group 1; KEGG: mta:Moth_1853 glycosyl transferase, group 1; glycosyl transferase group 1 complement(27966..29342) Beijerinckia indica subsp. indica ATCC 9039 6197907 YP_001830913.1 CDS Bind_3896 NC_010578.1 29474 31363 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: sus:Acid_1973 beta-ketoacyl synthase; 4'-phosphopantetheinyl transferase complement(29474..31363) Beijerinckia indica subsp. indica ATCC 9039 6197906 YP_001830914.1 CDS Bind_3897 NC_010578.1 31406 32626 R PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: cph:Cpha266_1099 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C-terminal domain protein; chalcone/stilbene synthase domain-containing protein complement(31406..32626) Beijerinckia indica subsp. indica ATCC 9039 6197905 YP_001830915.1 CDS Bind_3899 NC_010578.1 33187 34407 R PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: cph:Cpha266_1099 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C-terminal domain protein; chalcone/stilbene synthase domain-containing protein complement(33187..34407) Beijerinckia indica subsp. indica ATCC 9039 6197903 YP_001830916.1 CDS Bind_3900 NC_010578.1 34444 42468 R PFAM: short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase NPD; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sus:Acid_1972 beta-ketoacyl synthase; erythronolide synthase complement(34444..42468) Beijerinckia indica subsp. indica ATCC 9039 6197902 YP_001830917.1 CDS Bind_3901 NC_010578.1 43665 43868 D hypothetical protein 43665..43868 Beijerinckia indica subsp. indica ATCC 9039 6197901 YP_001830918.1 CDS Bind_3902 NC_010578.1 44081 44350 D hypothetical protein 44081..44350 Beijerinckia indica subsp. indica ATCC 9039 6197900 YP_001830919.1 CDS Bind_3903 NC_010578.1 44364 44780 D hypothetical protein 44364..44780 Beijerinckia indica subsp. indica ATCC 9039 6197899 YP_001830920.1 CDS Bind_3904 NC_010578.1 45462 47108 D PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1351 steroid monooxygenase; FAD dependent oxidoreductase 45462..47108 Beijerinckia indica subsp. indica ATCC 9039 6197898 YP_001830921.1 CDS Bind_3905 NC_010578.1 47198 48391 D PFAM: beta-lactamase; KEGG: dsh:Dshi_2284 beta-lactamase; beta-lactamase 47198..48391 Beijerinckia indica subsp. indica ATCC 9039 6197897 YP_001830922.1 CDS Bind_3906 NC_010578.1 48545 50587 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_1337 GAF modulated sigma54 specific transcriptional regulator, fis family; sigma-54 factor interaction domain-containing protein complement(48545..50587) Beijerinckia indica subsp. indica ATCC 9039 6197896 YP_001830923.1 CDS Bind_3907 NC_010578.1 51254 51892 R PFAM: regulatory protein TetR; KEGG: pla:Plav_0612 transcriptional regulator, TetR family; regulatory protein TetR complement(51254..51892) Beijerinckia indica subsp. indica ATCC 9039 6197895 YP_001830924.1 CDS Bind_3909 NC_010578.1 52727 53650 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: osa:4324493 Os01g0151700; short-chain dehydrogenase/reductase SDR 52727..53650 Beijerinckia indica subsp. indica ATCC 9039 6197893 YP_001830925.1 CDS Bind_3911 NC_010578.1 55063 55344 R hypothetical protein complement(55063..55344) Beijerinckia indica subsp. indica ATCC 9039 6197891 YP_001830926.1 CDS Bind_3912 NC_010578.1 55697 57124 R KEGG: bvi:Bcep1808_6395 hypothetical protein; hypothetical protein complement(55697..57124) Beijerinckia indica subsp. indica ATCC 9039 6197890 YP_001830927.1 CDS Bind_3913 NC_010578.1 58108 59532 R KEGG: rsq:Rsph17025_2588 Ig family protein; hypothetical protein complement(58108..59532) Beijerinckia indica subsp. indica ATCC 9039 6197889 YP_001830928.1 CDS Bind_3914 NC_010578.1 60316 61548 D PFAM: acyltransferase 3; KEGG: cak:Caul_3692 acyltransferase 3; acyltransferase 3 60316..61548 Beijerinckia indica subsp. indica ATCC 9039 6197888 YP_001830929.1 CDS Bind_3915 NC_010578.1 61700 63064 R KEGG: shn:Shewana3_1383 hypothetical protein; hypothetical protein complement(61700..63064) Beijerinckia indica subsp. indica ATCC 9039 6197887 YP_001830930.1 CDS Bind_3916 NC_010578.1 63117 63254 R hypothetical protein complement(63117..63254) Beijerinckia indica subsp. indica ATCC 9039 6197886 YP_001830931.1 CDS Bind_3917 NC_010578.1 63349 64491 R PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1473 hypothetical protein; glycosyl transferase group 1 complement(63349..64491) Beijerinckia indica subsp. indica ATCC 9039 6197885 YP_001830932.1 CDS Bind_3918 NC_010578.1 65181 66692 D hypothetical protein 65181..66692 Beijerinckia indica subsp. indica ATCC 9039 6197884 YP_001830973.1 CDS Bind_3677 NC_010580.1 46 585 D KEGG: gox:GOX2635 hypothetical protein; hypothetical protein 46..585 Beijerinckia indica subsp. indica ATCC 9039 6197938 YP_001830974.1 CDS Bind_3678 NC_010580.1 578 1543 D KEGG: gox:GOX2636 DotC; DotC 578..1543 Beijerinckia indica subsp. indica ATCC 9039 6198054 YP_001830975.1 CDS Bind_3679 NC_010580.1 1540 2682 D PFAM: type II secretion system protein E; KEGG: gox:GOX2639 twitching motility protein PilT; type II secretion system protein E 1540..2682 Beijerinckia indica subsp. indica ATCC 9039 6197942 YP_001830976.1 CDS Bind_3680 NC_010580.1 2682 2930 D KEGG: gox:GOX2640 IcmT; IcmT 2682..2930 Beijerinckia indica subsp. indica ATCC 9039 6197930 YP_001830977.1 CDS Bind_3681 NC_010580.1 2927 3355 D hypothetical protein 2927..3355 Beijerinckia indica subsp. indica ATCC 9039 6197941 YP_001830978.1 CDS Bind_3682 NC_010580.1 3364 3876 D PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7655 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 3364..3876 Beijerinckia indica subsp. indica ATCC 9039 6197940 YP_001830979.1 CDS Bind_3683 NC_010580.1 3876 5024 D KEGG: gox:GOX2637 hypothetical protein; hypothetical protein 3876..5024 Beijerinckia indica subsp. indica ATCC 9039 6197999 YP_001830980.1 CDS Bind_3684 NC_010580.1 5039 5578 D hypothetical protein 5039..5578 Beijerinckia indica subsp. indica ATCC 9039 6198048 YP_001830981.1 CDS Bind_3685 NC_010580.1 5588 5854 D KEGG: oan:Oant_1559 hypothetical protein; hypothetical protein 5588..5854 Beijerinckia indica subsp. indica ATCC 9039 6197928 YP_001830982.1 CDS Bind_3686 NC_010580.1 5886 8246 D KEGG: gox:GOX2641 DotL; DotL 5886..8246 Beijerinckia indica subsp. indica ATCC 9039 6197932 YP_001830983.1 CDS Bind_3687 NC_010580.1 8344 8592 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_4837 prevent-host-death family protein; prevent-host-death family protein 8344..8592 Beijerinckia indica subsp. indica ATCC 9039 6198020 YP_001830984.1 CDS Bind_3688 NC_010580.1 8582 8869 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: bam:Bamb_4836 addiction module toxin, RelE/StbE family; addiction module antitoxin 8582..8869 Beijerinckia indica subsp. indica ATCC 9039 6197933 YP_001830985.1 CDS Bind_3689 NC_010580.1 9808 10167 D hypothetical protein 9808..10167 Beijerinckia indica subsp. indica ATCC 9039 6198017 YP_001830986.1 CDS Bind_3690 NC_010580.1 10218 11063 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cak:Caul_2656 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(10218..11063) Beijerinckia indica subsp. indica ATCC 9039 6197936 YP_001830987.1 CDS Bind_3691 NC_010580.1 11154 11570 D KEGG: xau:Xaut_1169 4-oxalocrotonate tautomerase; hypothetical protein 11154..11570 Beijerinckia indica subsp. indica ATCC 9039 6197937 YP_001830988.1 CDS Bind_3692 NC_010580.1 11638 14844 R PFAM: TrwC relaxase; SMART: AAA ATPase; KEGG: gox:GOX2642 conjugal transfer protein TraA; TrwC relaxase complement(11638..14844) Beijerinckia indica subsp. indica ATCC 9039 6197927 YP_001830989.1 CDS Bind_3693 NC_010580.1 14841 15140 R hypothetical protein complement(14841..15140) Beijerinckia indica subsp. indica ATCC 9039 6198091 YP_001830990.1 CDS Bind_3694 NC_010580.1 15688 16098 D hypothetical protein 15688..16098 Beijerinckia indica subsp. indica ATCC 9039 6197934 YP_001830991.1 CDS Bind_3695 NC_010580.1 16129 24864 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Hemolysin-type calcium-binding region; Proprotein convertase P; Haemolysin-type calcium binding domain protein; KEGG: pol:Bpro_4929 hemolysin-type calcium-binding region; proprotein convertase P 16129..24864 Beijerinckia indica subsp. indica ATCC 9039 6197929 YP_001830992.1 CDS Bind_3696 NC_010580.1 24960 27122 D KEGG: smd:Smed_0884 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 24960..27122 Beijerinckia indica subsp. indica ATCC 9039 6197935 YP_001830993.1 CDS Bind_3697 NC_010580.1 27119 28564 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_0883 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 27119..28564 Beijerinckia indica subsp. indica ATCC 9039 6197939 YP_001830994.1 CDS Bind_3698 NC_010580.1 28835 29197 R PFAM: BRO domain protein; KEGG: ecv:APECO1_4056 putative anti-repressor protein; prophage antirepressor complement(28835..29197) Beijerinckia indica subsp. indica ATCC 9039 6197931 YP_001830995.1 CDS Bind_3699 NC_010580.1 29603 30187 D KEGG: acr:Acry_3544 hypothetical protein; hypothetical protein 29603..30187 Beijerinckia indica subsp. indica ATCC 9039 6198125 YP_001830996.1 CDS Bind_3700 NC_010580.1 30201 30986 D KEGG: gox:GOX2663 hypothetical protein; hypothetical protein 30201..30986 Beijerinckia indica subsp. indica ATCC 9039 6198124 YP_001830997.1 CDS Bind_3701 NC_010580.1 30959 31963 D KEGG: acr:Acry_3545 hypothetical protein; hypothetical protein 30959..31963 Beijerinckia indica subsp. indica ATCC 9039 6198123 YP_001830998.1 CDS Bind_3702 NC_010580.1 31956 32573 D hypothetical protein 31956..32573 Beijerinckia indica subsp. indica ATCC 9039 6198122 YP_001830999.1 CDS Bind_3703 NC_010580.1 32686 33387 D KEGG: bxe:Bxe_B1040 hypothetical protein; hypothetical protein 32686..33387 Beijerinckia indica subsp. indica ATCC 9039 6198121 YP_001831000.1 CDS Bind_3704 NC_010580.1 33371 33709 D hypothetical protein 33371..33709 Beijerinckia indica subsp. indica ATCC 9039 6198120 YP_001831001.1 CDS Bind_3705 NC_010580.1 33800 34690 D KEGG: gox:GOX2604 hypothetical protein; hypothetical protein 33800..34690 Beijerinckia indica subsp. indica ATCC 9039 6198119 YP_001831002.1 CDS Bind_3706 NC_010580.1 34705 35100 D hypothetical protein 34705..35100 Beijerinckia indica subsp. indica ATCC 9039 6198118 YP_001831003.1 CDS Bind_3707 NC_010580.1 35259 35504 D PFAM: Rv0623 family protein transcription factor; KEGG: bbt:BBta_p0292 hypothetical protein; transcription factor 35259..35504 Beijerinckia indica subsp. indica ATCC 9039 6198117 YP_001831004.1 CDS Bind_3708 NC_010580.1 35504 35902 D PFAM: PilT protein domain protein; KEGG: bbt:BBta_p0291 hypothetical protein; PilT domain-containing protein 35504..35902 Beijerinckia indica subsp. indica ATCC 9039 6198116 YP_001831005.1 CDS Bind_3709 NC_010580.1 36023 36265 D KEGG: nha:Nham_2476 hypothetical protein; hypothetical protein 36023..36265 Beijerinckia indica subsp. indica ATCC 9039 6198115 YP_001831006.1 CDS Bind_3710 NC_010580.1 36323 36493 R hypothetical protein complement(36323..36493) Beijerinckia indica subsp. indica ATCC 9039 6198114 YP_001831007.1 CDS Bind_3711 NC_010580.1 36577 36903 R PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_4988 protein of unknown function DUF736; hypothetical protein complement(36577..36903) Beijerinckia indica subsp. indica ATCC 9039 6198113 YP_001831008.1 CDS Bind_3712 NC_010580.1 36854 37480 R KEGG: hsa:645586 hypothetical LOC645586; hypothetical protein complement(36854..37480) Beijerinckia indica subsp. indica ATCC 9039 6198112 YP_001831009.1 CDS Bind_3713 NC_010580.1 37587 38006 R hypothetical protein complement(37587..38006) Beijerinckia indica subsp. indica ATCC 9039 6198111 YP_001831010.1 CDS Bind_3714 NC_010580.1 38096 38281 R hypothetical protein complement(38096..38281) Beijerinckia indica subsp. indica ATCC 9039 6198110 YP_001831011.1 CDS Bind_3715 NC_010580.1 38374 38691 R PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_4988 protein of unknown function DUF736; hypothetical protein complement(38374..38691) Beijerinckia indica subsp. indica ATCC 9039 6198109 YP_001831012.1 CDS Bind_3716 NC_010580.1 39493 39726 R hypothetical protein complement(39493..39726) Beijerinckia indica subsp. indica ATCC 9039 6198108 YP_001831013.1 CDS Bind_3717 NC_010580.1 39773 40366 R PFAM: protein of unknown function DUF820; KEGG: tth:TTC0860 hypothetical protein; hypothetical protein complement(39773..40366) Beijerinckia indica subsp. indica ATCC 9039 6198107 YP_001831014.1 CDS Bind_3718 NC_010580.1 40420 40791 R hypothetical protein complement(40420..40791) Beijerinckia indica subsp. indica ATCC 9039 6198106 YP_001831015.1 CDS Bind_3719 NC_010580.1 40861 41031 R hypothetical protein complement(40861..41031) Beijerinckia indica subsp. indica ATCC 9039 6198105 YP_001831016.1 CDS Bind_3720 NC_010580.1 41112 41711 R KEGG: rle:pRL80110 hypothetical protein; hypothetical protein complement(41112..41711) Beijerinckia indica subsp. indica ATCC 9039 6198104 YP_001831017.1 CDS Bind_3721 NC_010580.1 42705 43283 D hypothetical protein 42705..43283 Beijerinckia indica subsp. indica ATCC 9039 6198103 YP_001831018.1 CDS Bind_3722 NC_010580.1 43333 43887 R KEGG: sal:Sala_2655 hypothetical protein; hypothetical protein complement(43333..43887) Beijerinckia indica subsp. indica ATCC 9039 6198102 YP_001831019.1 CDS Bind_3723 NC_010580.1 44013 44210 R hypothetical protein complement(44013..44210) Beijerinckia indica subsp. indica ATCC 9039 6198101 YP_001831020.1 CDS Bind_3724 NC_010580.1 44264 44485 R hypothetical protein complement(44264..44485) Beijerinckia indica subsp. indica ATCC 9039 6198100 YP_001831021.1 CDS Bind_3725 NC_010580.1 44508 44867 R hypothetical protein complement(44508..44867) Beijerinckia indica subsp. indica ATCC 9039 6198099 YP_001831022.1 CDS Bind_3726 NC_010580.1 44946 45140 R KEGG: bbt:BBta_7714 hypothetical protein; hypothetical protein complement(44946..45140) Beijerinckia indica subsp. indica ATCC 9039 6198098 YP_001831023.1 CDS Bind_3727 NC_010580.1 45116 45556 R hypothetical protein complement(45116..45556) Beijerinckia indica subsp. indica ATCC 9039 6198097 YP_001831024.1 CDS Bind_3728 NC_010580.1 45557 45823 R hypothetical protein complement(45557..45823) Beijerinckia indica subsp. indica ATCC 9039 6198096 YP_001831025.1 CDS Bind_3729 NC_010580.1 45858 47555 R ParB family; plasmid partitioning protein complement(45858..47555) Beijerinckia indica subsp. indica ATCC 9039 6198095 YP_001831026.1 CDS Bind_3731 NC_010580.1 48400 48960 R KEGG: gox:GOX2530 hypothetical protein; hypothetical protein complement(48400..48960) Beijerinckia indica subsp. indica ATCC 9039 6198093 YP_001831027.1 CDS Bind_3732 NC_010580.1 49061 54142 R PFAM: helicase domain protein; KEGG: gox:GOX2542 DNA methylase; helicase domain-containing protein complement(49061..54142) Beijerinckia indica subsp. indica ATCC 9039 6198092 YP_001831028.1 CDS Bind_3733 NC_010580.1 54228 54620 R hypothetical protein complement(54228..54620) Beijerinckia indica subsp. indica ATCC 9039 6198090 YP_001831029.1 CDS Bind_3734 NC_010580.1 54624 54950 R hypothetical protein complement(54624..54950) Beijerinckia indica subsp. indica ATCC 9039 6198089 YP_001831030.1 CDS Bind_3735 NC_010580.1 55225 55566 R hypothetical protein complement(55225..55566) Beijerinckia indica subsp. indica ATCC 9039 6198088 YP_001831031.1 CDS Bind_3736 NC_010580.1 55665 55952 R hypothetical protein complement(55665..55952) Beijerinckia indica subsp. indica ATCC 9039 6198087 YP_001831032.1 CDS Bind_3737 NC_010580.1 56028 56567 R KEGG: dol:Dole_3186 CO dehydrogenase/acetyl-CoA synthase delta subunit; hypothetical protein complement(56028..56567) Beijerinckia indica subsp. indica ATCC 9039 6198086 YP_001831033.1 CDS Bind_3738 NC_010580.1 56800 56949 R hypothetical protein complement(56800..56949) Beijerinckia indica subsp. indica ATCC 9039 6198085 YP_001831034.1 CDS Bind_3739 NC_010580.1 56984 57118 R hypothetical protein complement(56984..57118) Beijerinckia indica subsp. indica ATCC 9039 6198084 YP_001831035.1 CDS Bind_3740 NC_010580.1 57207 57479 R hypothetical protein complement(57207..57479) Beijerinckia indica subsp. indica ATCC 9039 6198083 YP_001831036.1 CDS Bind_3741 NC_010580.1 57681 57950 R hypothetical protein complement(57681..57950) Beijerinckia indica subsp. indica ATCC 9039 6198082 YP_001831037.1 CDS Bind_3743 NC_010580.1 58763 58933 R hypothetical protein complement(58763..58933) Beijerinckia indica subsp. indica ATCC 9039 6198080 YP_001831038.1 CDS Bind_3744 NC_010580.1 58930 59292 R KEGG: nha:Nham_2399 hypothetical protein; hypothetical protein complement(58930..59292) Beijerinckia indica subsp. indica ATCC 9039 6198079 YP_001831039.1 CDS Bind_3745 NC_010580.1 59289 59495 R hypothetical protein complement(59289..59495) Beijerinckia indica subsp. indica ATCC 9039 6198078 YP_001831040.1 CDS Bind_3746 NC_010580.1 59506 61698 R PFAM: UvrD/REP helicase; KEGG: gox:GOX2523 DNA helicase II UvrD; UvrD/REP helicase complement(59506..61698) Beijerinckia indica subsp. indica ATCC 9039 6198077 YP_001831041.1 CDS Bind_3747 NC_010580.1 61878 62198 R hypothetical protein complement(61878..62198) Beijerinckia indica subsp. indica ATCC 9039 6198076 YP_001831042.1 CDS Bind_3748 NC_010580.1 62195 63139 R KEGG: gox:GOX2525 hypothetical protein; hypothetical protein complement(62195..63139) Beijerinckia indica subsp. indica ATCC 9039 6198075 YP_001831043.1 CDS Bind_3749 NC_010580.1 63136 63528 R KEGG: rno:684340 hypothetical protein; hypothetical protein complement(63136..63528) Beijerinckia indica subsp. indica ATCC 9039 6198074 YP_001831044.1 CDS Bind_3750 NC_010580.1 63770 64204 D KEGG: nar:Saro_3916 WGR domain protein; hypothetical protein 63770..64204 Beijerinckia indica subsp. indica ATCC 9039 6198073 YP_001831045.1 CDS Bind_3751 NC_010580.1 64255 64704 D PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24 and S26 domain protein; peptidase S24/S26 domain-containing protein 64255..64704 Beijerinckia indica subsp. indica ATCC 9039 6198072 YP_001831046.1 CDS Bind_3752 NC_010580.1 64704 65966 D PFAM: UMUC domain protein DNA-repair protein; KEGG: mex:Mext_3517 DNA-directed DNA polymerase; DNA-directed DNA polymerase 64704..65966 Beijerinckia indica subsp. indica ATCC 9039 6198071 YP_001831047.1 CDS Bind_3753 NC_010580.1 66033 66743 R hypothetical protein complement(66033..66743) Beijerinckia indica subsp. indica ATCC 9039 6198070 YP_001831048.1 CDS Bind_3754 NC_010580.1 66740 67384 R KEGG: pla:Plav_0032 cobyrinic acid ac-diamide synthase; hypothetical protein complement(66740..67384) Beijerinckia indica subsp. indica ATCC 9039 6198069 YP_001831049.1 CDS Bind_3758 NC_010580.1 69815 70114 D TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: xau:Xaut_4999 addiction module antitoxin, RelB/DinJ family; addiction module antitoxin 69815..70114 Beijerinckia indica subsp. indica ATCC 9039 6198065 YP_001831050.1 CDS Bind_3759 NC_010580.1 70152 70391 D PFAM: plasmid stabilization system; KEGG: ajs:Ajs_2238 addiction module toxin, RelE/StbE family; plasmid stabilization system protein 70152..70391 Beijerinckia indica subsp. indica ATCC 9039 6198064 YP_001831051.1 CDS Bind_3760 NC_010580.1 70588 70944 D hypothetical protein 70588..70944 Beijerinckia indica subsp. indica ATCC 9039 6198063 YP_001831052.1 CDS Bind_3762 NC_010580.1 71869 73326 R KEGG: mlo:mlr6204 hypothetical protein; hypothetical protein complement(71869..73326) Beijerinckia indica subsp. indica ATCC 9039 6198061 YP_001831053.1 CDS Bind_3763 NC_010580.1 73316 74650 R KEGG: mlo:mlr6203 hypothetical protein; hypothetical protein complement(73316..74650) Beijerinckia indica subsp. indica ATCC 9039 6198060 YP_001831054.1 CDS Bind_3764 NC_010580.1 74987 75784 D KEGG: nha:Nham_1149 hypothetical protein; hypothetical protein 74987..75784 Beijerinckia indica subsp. indica ATCC 9039 6198059 YP_001831055.1 CDS Bind_3765 NC_010580.1 75777 79088 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: fjo:Fjoh_3576 DEAD/DEAH box helicase domain protein; helicase domain-containing protein 75777..79088 Beijerinckia indica subsp. indica ATCC 9039 6198058 YP_001831056.1 CDS Bind_3766 NC_010580.1 79470 79715 R hypothetical protein complement(79470..79715) Beijerinckia indica subsp. indica ATCC 9039 6198057 YP_001831057.1 CDS Bind_3767 NC_010580.1 79777 80442 R KEGG: ajs:Ajs_2631 hypothetical protein; hypothetical protein complement(79777..80442) Beijerinckia indica subsp. indica ATCC 9039 6198056 YP_001831058.1 CDS Bind_3768 NC_010580.1 80439 81545 R KEGG: ajs:Ajs_2630 hypothetical protein; hypothetical protein complement(80439..81545) Beijerinckia indica subsp. indica ATCC 9039 6198055 YP_001831059.1 CDS Bind_3769 NC_010580.1 81565 82203 R KEGG: rfr:Rfer_1064 hypothetical protein; hypothetical protein complement(81565..82203) Beijerinckia indica subsp. indica ATCC 9039 6198053 YP_001831060.1 CDS Bind_3770 NC_010580.1 82203 82670 R PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2628 hypothetical protein; hypothetical protein complement(82203..82670) Beijerinckia indica subsp. indica ATCC 9039 6198052 YP_001831061.1 CDS Bind_3771 NC_010580.1 82979 84136 D KEGG: sdn:Sden_3578 hypothetical protein; hypothetical protein 82979..84136 Beijerinckia indica subsp. indica ATCC 9039 6198051 YP_001831062.1 CDS Bind_3772 NC_010580.1 84124 84792 D KEGG: pca:Pcar_2915 hypothetical protein; hypothetical protein 84124..84792 Beijerinckia indica subsp. indica ATCC 9039 6198050 YP_001831063.1 CDS Bind_3773 NC_010580.1 84891 86063 R PFAM: integrase family protein; KEGG: sme:SMa2257 possible integrase-like protein; integrase family protein complement(84891..86063) Beijerinckia indica subsp. indica ATCC 9039 6198049 YP_001831064.1 CDS Bind_3774 NC_010580.1 86060 86476 R PFAM: PilT protein domain protein; KEGG: smd:Smed_6500 PilT protein domain protein; PilT domain-containing protein complement(86060..86476) Beijerinckia indica subsp. indica ATCC 9039 6198047 YP_001831065.1 CDS Bind_3775 NC_010580.1 86476 86718 R TIGRFAM: prevent-host-death family protein; KEGG: rpa:RPA1834 hypothetical protein; prevent-host-death family protein complement(86476..86718) Beijerinckia indica subsp. indica ATCC 9039 6198046 YP_001831066.1 CDS Bind_3776 NC_010580.1 87016 87324 D hypothetical protein 87016..87324 Beijerinckia indica subsp. indica ATCC 9039 6198045 YP_001831067.1 CDS Bind_3777 NC_010580.1 87321 88394 D PFAM: protein of unknown function DUF1612; KEGG: nha:Nham_4505 protein of unknown function DUF1612; hypothetical protein 87321..88394 Beijerinckia indica subsp. indica ATCC 9039 6198044 YP_001831068.1 CDS Bind_3778 NC_010580.1 88840 89535 R KEGG: gbe:GbCGDNIH1_1414 hypothetical secreted protein; hypothetical protein complement(88840..89535) Beijerinckia indica subsp. indica ATCC 9039 6198043 YP_001831069.1 CDS Bind_3779 NC_010580.1 89803 90072 R KEGG: rle:RL3601 hypothetical protein; hypothetical protein complement(89803..90072) Beijerinckia indica subsp. indica ATCC 9039 6198042 YP_001831070.1 CDS Bind_3780 NC_010580.1 90078 91010 R PFAM: fatty acid hydroxylase; KEGG: rle:RL3600 putative transmembrane fatty acid synthesis protein; fatty acid hydroxylase complement(90078..91010) Beijerinckia indica subsp. indica ATCC 9039 6198041 YP_001831071.1 CDS Bind_3781 NC_010580.1 91189 91905 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_3219 two-component response transcriptional regulator (OmpR family); two component transcriptional regulator 91189..91905 Beijerinckia indica subsp. indica ATCC 9039 6198040 YP_001831072.1 CDS Bind_3782 NC_010580.1 91893 93278 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bbt:BBta_3220 putative two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 91893..93278 Beijerinckia indica subsp. indica ATCC 9039 6198039 YP_001831073.1 CDS Bind_3783 NC_010580.1 93737 93961 D hypothetical protein 93737..93961 Beijerinckia indica subsp. indica ATCC 9039 6198038 YP_001831074.1 CDS Bind_3784 NC_010580.1 94775 95515 R KEGG: rpc:RPC_3230 hypothetical protein; hypothetical protein complement(94775..95515) Beijerinckia indica subsp. indica ATCC 9039 6198037 YP_001831075.1 CDS Bind_3785 NC_010580.1 95800 96129 R KEGG: gbe:GbCGDNIH1_1860 hypothetical secreted protein; hypothetical protein complement(95800..96129) Beijerinckia indica subsp. indica ATCC 9039 6198036 YP_001831076.1 CDS Bind_3788 NC_010580.1 98911 99576 D PFAM: chromosome segregation and condensation protein ScpB; KEGG: nha:Nham_4583 putative transcriptional regulator; chromosome segregation and condensation protein ScpB 98911..99576 Beijerinckia indica subsp. indica ATCC 9039 6198033 YP_001831077.1 CDS Bind_3789 NC_010580.1 99690 100520 D hypothetical protein 99690..100520 Beijerinckia indica subsp. indica ATCC 9039 6198032 YP_001831078.1 CDS Bind_3790 NC_010580.1 100633 100851 D hypothetical protein 100633..100851 Beijerinckia indica subsp. indica ATCC 9039 6198031 YP_001831079.1 CDS Bind_3792 NC_010580.1 102390 102587 R hypothetical protein complement(102390..102587) Beijerinckia indica subsp. indica ATCC 9039 6198029 YP_001831080.1 CDS Bind_3793 NC_010580.1 102746 104059 D PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL4218 putative mannitol-binding component of ABC transporter; extracellular solute-binding protein 102746..104059 Beijerinckia indica subsp. indica ATCC 9039 6198028 YP_001831081.1 CDS Bind_3794 NC_010580.1 104157 105062 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4217 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport systems inner membrane component 104157..105062 Beijerinckia indica subsp. indica ATCC 9039 6198027 YP_001831082.1 CDS Bind_3795 NC_010580.1 105065 105895 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4216 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport systems inner membrane component 105065..105895 Beijerinckia indica subsp. indica ATCC 9039 6198026 YP_001831083.1 CDS Bind_3796 NC_010580.1 105906 106904 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_3278 ATP-binding transport protein SmoK (POLK); ABC transporter related 105906..106904 Beijerinckia indica subsp. indica ATCC 9039 6198025 YP_001831084.1 CDS Bind_3797 NC_010580.1 106999 108978 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH); mannitol dehydrogenase domain-containing protein 106999..108978 Beijerinckia indica subsp. indica ATCC 9039 6198024 YP_001831085.1 CDS Bind_3800 NC_010580.1 109838 110467 D KEGG: gox:GOX2097 sorbitol dehydrogenase small subunit; sorbitol dehydrogenase small subunit 109838..110467 Beijerinckia indica subsp. indica ATCC 9039 6198021 YP_001831086.1 CDS Bind_3801 NC_010580.1 110490 112127 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: zmo:ZMO1285 solbitol dehydrogenase large subunit; glucose-methanol-choline oxidoreductase 110490..112127 Beijerinckia indica subsp. indica ATCC 9039 6198019 YP_001831087.1 CDS Bind_3802 NC_010580.1 112120 113487 D PFAM: cytochrome c class I; KEGG: gox:GOX2094 sorbitol dehydrogenase cytochrome c subunit; gluconate 2-dehydrogenase (acceptor) 112120..113487 Beijerinckia indica subsp. indica ATCC 9039 6198018 YP_001831088.1 CDS Bind_3803 NC_010580.1 113582 114361 R KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; putative insertion sequence transposase-like protein complement(113582..114361) Beijerinckia indica subsp. indica ATCC 9039 6198016 YP_001831089.1 CDS Bind_3804 NC_010580.1 114694 114870 R hypothetical protein complement(114694..114870) Beijerinckia indica subsp. indica ATCC 9039 6198015 YP_001831090.1 CDS Bind_3805 NC_010580.1 114861 116858 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(114861..116858) Beijerinckia indica subsp. indica ATCC 9039 6198014 YP_001831091.1 CDS Bind_3806 NC_010580.1 116930 117910 R KEGG: atc:AGR_L_812 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(116930..117910) Beijerinckia indica subsp. indica ATCC 9039 6198013 YP_001831092.1 CDS Bind_3807 NC_010580.1 118025 119470 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bja:bll5785 xylulokinase; xylulokinase complement(118025..119470) Beijerinckia indica subsp. indica ATCC 9039 6198012 YP_001831093.1 CDS Bind_3808 NC_010580.1 119454 120419 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr4907 transcriptional regulator (AraC/XylS family); AraC family transcriptional regulator complement(119454..120419) Beijerinckia indica subsp. indica ATCC 9039 6198011 YP_001831094.1 CDS Bind_3809 NC_010580.1 120412 120693 R hypothetical protein complement(120412..120693) Beijerinckia indica subsp. indica ATCC 9039 6198010 YP_001831095.1 CDS Bind_3810 NC_010580.1 120695 121741 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr4915 xylitol (sorbitol) dehydrogenase; alcohol dehydrogenase complement(120695..121741) Beijerinckia indica subsp. indica ATCC 9039 6198009 YP_001831096.1 CDS Bind_3811 NC_010580.1 121900 122901 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_1506 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(121900..122901) Beijerinckia indica subsp. indica ATCC 9039 6198008 YP_001831097.1 CDS Bind_3812 NC_010580.1 123072 123353 D hypothetical protein 123072..123353 Beijerinckia indica subsp. indica ATCC 9039 6198007 YP_001831098.1 CDS Bind_3814 NC_010580.1 124252 125901 D PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: smd:Smed_5451 transposase IS204/IS1001/IS1096/IS1165 family protein; transposase IS204/IS1001/IS1096/IS1165 family protein 124252..125901 Beijerinckia indica subsp. indica ATCC 9039 6198005 YP_001831099.1 CDS Bind_3815 NC_010580.1 126419 126703 R hypothetical protein complement(126419..126703) Beijerinckia indica subsp. indica ATCC 9039 6198004 YP_001831100.1 CDS Bind_3816 NC_010580.1 126958 127434 D PFAM: heat shock protein Hsp20; KEGG: mlo:mll9627 small heat shock protein; heat shock protein Hsp20 126958..127434 Beijerinckia indica subsp. indica ATCC 9039 6198003 YP_001831101.1 CDS Bind_3817 NC_010580.1 127500 127910 D KEGG: nha:Nham_4549 hypothetical protein; hypothetical protein 127500..127910 Beijerinckia indica subsp. indica ATCC 9039 6198002 YP_001831102.1 CDS Bind_3822 NC_010580.1 130105 131553 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: nar:Saro_0180 hemerythrin HHE cation binding region protein; hemerythrin HHE cation binding domain-containing protein 130105..131553 Beijerinckia indica subsp. indica ATCC 9039 6197996 YP_001831103.1 CDS Bind_3823 NC_010580.1 131736 132608 R PFAM: transglutaminase domain protein; KEGG: rle:RL1406 putative transglutaminase family protein; transglutaminase domain-containing protein complement(131736..132608) Beijerinckia indica subsp. indica ATCC 9039 6197995 YP_001831104.1 CDS Bind_3825 NC_010580.1 133117 133731 D PFAM: isochorismatase hydrolase; KEGG: mex:Mext_0062 isochorismatase hydrolase; isochorismatase hydrolase 133117..133731 Beijerinckia indica subsp. indica ATCC 9039 6197993 YP_001831105.1 CDS Bind_3826 NC_010580.1 133865 134689 R KEGG: bja:bll5207 hypothetical protein; hypothetical protein complement(133865..134689) Beijerinckia indica subsp. indica ATCC 9039 6197992 YP_001831106.1 CDS Bind_3827 NC_010580.1 135362 135811 D PFAM: protein of unknown function DUF892; KEGG: rpe:RPE_1822 protein of unknown function DUF892; hypothetical protein 135362..135811 Beijerinckia indica subsp. indica ATCC 9039 6197991 YP_001831107.1 CDS Bind_3828 NC_010580.1 135743 136524 R KEGG: gox:GOX2729 transposase; transposase complement(join(135743..136195,136195..136524)) Beijerinckia indica subsp. indica ATCC 9039 6197990 YP_001831108.1 CDS Bind_3829 NC_010580.1 136826 137332 R PFAM: protein of unknown function DUF892; KEGG: smd:Smed_4046 protein of unknown function DUF892; hypothetical protein complement(136826..137332) Beijerinckia indica subsp. indica ATCC 9039 6197989 YP_001831109.1 CDS Bind_3830 NC_010580.1 137667 138610 D KEGG: acr:Acry_3597 transposase and inactivated derivatives-like protein; transposase join(137667..138011,138011..138610) Beijerinckia indica subsp. indica ATCC 9039 6197988 YP_001831110.1 CDS Bind_3833 NC_010580.1 139994 140524 D KEGG: bra:BRADO3437 hypothetical protein; hypothetical protein 139994..140524 Beijerinckia indica subsp. indica ATCC 9039 6197985 YP_001831111.1 CDS Bind_3834 NC_010580.1 140808 141998 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 140808..141998 Beijerinckia indica subsp. indica ATCC 9039 6197984 YP_001831112.1 CDS Bind_3835 NC_010580.1 142166 145669 R KEGG: sme:SMb20515 putative chemotaxis methyltransferase protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor complement(142166..145669) Beijerinckia indica subsp. indica ATCC 9039 6197983 YP_001831113.1 CDS Bind_3836 NC_010580.1 145882 146865 D PFAM: CheB methylesterase; KEGG: smd:Smed_5775 CheB methylesterase; CheB methylesterase 145882..146865 Beijerinckia indica subsp. indica ATCC 9039 6197982 YP_001831114.1 CDS Bind_3837 NC_010580.1 147543 147782 D KEGG: rpe:RPE_1591 hypothetical protein; hypothetical protein 147543..147782 Beijerinckia indica subsp. indica ATCC 9039 6197981 YP_001831115.1 CDS Bind_3842 NC_010580.1 150469 150930 D PFAM: protein of unknown function DUF1348; KEGG: rle:RL1427 hypothetical protein; hypothetical protein 150469..150930 Beijerinckia indica subsp. indica ATCC 9039 6197976 YP_001831116.1 CDS Bind_3843 NC_010580.1 151002 151769 R KEGG: hch:HCH_04879 hypothetical protein; hypothetical protein complement(151002..151769) Beijerinckia indica subsp. indica ATCC 9039 6197975 YP_001831117.1 CDS Bind_3844 NC_010580.1 152123 152776 D PFAM: helix-turn-helix domain protein; KEGG: smd:Smed_1854 putative phage repressor; XRE family transcriptional regulator 152123..152776 Beijerinckia indica subsp. indica ATCC 9039 6197974 YP_001831118.1 CDS Bind_3845 NC_010580.1 153004 153585 R PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator complement(153004..153585) Beijerinckia indica subsp. indica ATCC 9039 6197973 YP_001831119.1 CDS Bind_3846 NC_010580.1 154232 154642 R hypothetical protein complement(154232..154642) Beijerinckia indica subsp. indica ATCC 9039 6197972 YP_001831120.1 CDS Bind_3847 NC_010580.1 154690 155973 R PFAM: replication protein C; KEGG: acr:Acry_3578 replication protein C; replication protein C complement(154690..155973) Beijerinckia indica subsp. indica ATCC 9039 6197971 YP_001831121.1 CDS Bind_3848 NC_010580.1 156275 156835 R PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_0065 nuclease (SNase domain protein); nuclease complement(156275..156835) Beijerinckia indica subsp. indica ATCC 9039 6197970 YP_001831122.1 CDS Bind_3849 NC_010580.1 157417 157806 D hypothetical protein 157417..157806 Beijerinckia indica subsp. indica ATCC 9039 6197969 YP_001831123.1 CDS Bind_3850 NC_010580.1 157937 159001 D KEGG: gox:GOX2606 hypothetical protein; hypothetical protein 157937..159001 Beijerinckia indica subsp. indica ATCC 9039 6197968 YP_001831124.1 CDS Bind_3851 NC_010580.1 159003 159530 D hypothetical protein 159003..159530 Beijerinckia indica subsp. indica ATCC 9039 6197967 YP_001831125.1 CDS Bind_3852 NC_010580.1 159587 159898 R KEGG: gox:GOX2608 hypothetical protein; hypothetical protein complement(159587..159898) Beijerinckia indica subsp. indica ATCC 9039 6197966 YP_001831126.1 CDS Bind_3853 NC_010580.1 159946 160407 R hypothetical protein complement(159946..160407) Beijerinckia indica subsp. indica ATCC 9039 6197965 YP_001831127.1 CDS Bind_3854 NC_010580.1 160410 162740 R KEGG: gox:GOX2610 hypothetical membrane protein; hypothetical protein complement(160410..162740) Beijerinckia indica subsp. indica ATCC 9039 6197964 YP_001831128.1 CDS Bind_3855 NC_010580.1 162804 164261 R KEGG: gox:GOX2611 hypothetical protein; hypothetical protein complement(162804..164261) Beijerinckia indica subsp. indica ATCC 9039 6197963 YP_001831129.1 CDS Bind_3856 NC_010580.1 164279 165448 R KEGG: gox:GOX2612 TraW; hypothetical protein complement(164279..165448) Beijerinckia indica subsp. indica ATCC 9039 6197962 YP_001831130.1 CDS Bind_3857 NC_010580.1 165457 166002 R KEGG: gox:GOX2613 hypothetical protein; hypothetical protein complement(165457..166002) Beijerinckia indica subsp. indica ATCC 9039 6197961 YP_001831131.1 CDS Bind_3858 NC_010580.1 166002 166460 R hypothetical protein complement(166002..166460) Beijerinckia indica subsp. indica ATCC 9039 6197960 YP_001831132.1 CDS Bind_3859 NC_010580.1 166527 166970 R hypothetical protein complement(166527..166970) Beijerinckia indica subsp. indica ATCC 9039 6197959 YP_001831133.1 CDS Bind_3860 NC_010580.1 167133 167588 D PFAM: helix-turn-helix domain protein; KEGG: rpa:RPA4787 anaerobic benzoate catabolism transcriptional regulator; XRE family transcriptional regulator 167133..167588 Beijerinckia indica subsp. indica ATCC 9039 6197958 YP_001831134.1 CDS Bind_3861 NC_010580.1 167697 168671 D hypothetical protein 167697..168671 Beijerinckia indica subsp. indica ATCC 9039 6197957 YP_001831135.1 CDS Bind_3862 NC_010580.1 168721 169350 D KEGG: lpc:LPC_2894 IcmL (DotI); hypothetical protein 168721..169350 Beijerinckia indica subsp. indica ATCC 9039 6197956 YP_001831136.1 CDS Bind_3863 NC_010580.1 169359 170321 D KEGG: gox:GOX2617 DotH; DotH 169359..170321 Beijerinckia indica subsp. indica ATCC 9039 6197955 YP_001831137.1 CDS Bind_3864 NC_010580.1 170323 171624 D KEGG: gox:GOX2618 DotG; hypothetical protein 170323..171624 Beijerinckia indica subsp. indica ATCC 9039 6197954 YP_001831138.1 CDS Bind_3865 NC_010580.1 171680 173110 D KEGG: gox:GOX2619 hypothetical protein; hypothetical protein 171680..173110 Beijerinckia indica subsp. indica ATCC 9039 6197953 YP_001831139.1 CDS Bind_3866 NC_010580.1 173120 173656 D hypothetical protein 173120..173656 Beijerinckia indica subsp. indica ATCC 9039 6197952 YP_001831140.1 CDS Bind_3867 NC_010580.1 173677 173838 D hypothetical protein 173677..173838 Beijerinckia indica subsp. indica ATCC 9039 6197951 YP_001831141.1 CDS Bind_3868 NC_010580.1 174056 174514 D KEGG: mbb:BCG_0318c PE-PGRS family protein; hypothetical protein 174056..174514 Beijerinckia indica subsp. indica ATCC 9039 6197950 YP_001831142.1 CDS Bind_3869 NC_010580.1 174532 175179 D KEGG: gox:GOX2621 hypothetical protein; hypothetical protein 174532..175179 Beijerinckia indica subsp. indica ATCC 9039 6197949 YP_001831143.1 CDS Bind_3870 NC_010580.1 175191 178247 D KEGG: gox:GOX2622 DotO; DotO 175191..178247 Beijerinckia indica subsp. indica ATCC 9039 6197948 YP_001831144.1 CDS Bind_3871 NC_010580.1 178511 178993 D KEGG: eci:UTI89_P001 hypothetical protein; hypothetical protein 178511..178993 Beijerinckia indica subsp. indica ATCC 9039 6197947 YP_001831145.1 CDS Bind_3872 NC_010580.1 179025 179573 D hypothetical protein 179025..179573 Beijerinckia indica subsp. indica ATCC 9039 6197946 YP_001831146.1 CDS Bind_3873 NC_010580.1 179592 179936 R PFAM: histone family protein DNA-binding protein; KEGG: pla:Plav_0506 histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(179592..179936) Beijerinckia indica subsp. indica ATCC 9039 6197945 YP_001831147.1 CDS Bind_3874 NC_010580.1 180120 180524 D hypothetical protein 180120..180524 Beijerinckia indica subsp. indica ATCC 9039 6197944 YP_001831148.1 CDS Bind_3875 NC_010580.1 180485 181450 R KEGG: psb:Psyr_1149 hypothetical protein; hypothetical protein complement(180485..181450) Beijerinckia indica subsp. indica ATCC 9039 6197943 YP_001831149.1 CDS rpsT NC_010581.1 8 271 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 8..271 Beijerinckia indica subsp. indica ATCC 9039 6200612 YP_001831150.1 CDS Bind_0002 NC_010581.1 413 748 D hypothetical protein 413..748 Beijerinckia indica subsp. indica ATCC 9039 6201461 YP_001831151.1 CDS dnaA NC_010581.1 1509 3041 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1509..3041 Beijerinckia indica subsp. indica ATCC 9039 6201424 YP_001831152.1 CDS ruvC NC_010581.1 3144 3671 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3144..3671 Beijerinckia indica subsp. indica ATCC 9039 6201463 YP_001831153.1 CDS Bind_0005 NC_010581.1 3668 4285 D TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: rpa:RPA1100 Holliday junction DNA helicase motor protein; Holliday junction DNA helicase RuvA 3668..4285 Beijerinckia indica subsp. indica ATCC 9039 6201467 YP_001831154.1 CDS Bind_0006 NC_010581.1 4319 5377 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(4319..5377) Beijerinckia indica subsp. indica ATCC 9039 6201650 YP_001831155.1 CDS Bind_0007 NC_010581.1 5533 6546 D KEGG: nwi:Nwi_0471 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 5533..6546 Beijerinckia indica subsp. indica ATCC 9039 6201674 YP_001831156.1 CDS Bind_0008 NC_010581.1 6552 7292 D KEGG: xau:Xaut_1159 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 6552..7292 Beijerinckia indica subsp. indica ATCC 9039 6201675 YP_001831157.1 CDS Bind_0009 NC_010581.1 7307 8101 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6190 ABC transporter ATP-binding protein; ABC transporter-like protein 7307..8101 Beijerinckia indica subsp. indica ATCC 9039 6201805 YP_001831158.1 CDS Bind_0010 NC_010581.1 8098 8931 D PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein; ABC-2 type transporter 8098..8931 Beijerinckia indica subsp. indica ATCC 9039 6201422 YP_001831159.1 CDS Bind_0011 NC_010581.1 8947 9345 R PFAM: cytochrome c class I; KEGG: nwi:Nwi_2582 cytochrome c, class I; cytochrome c class I complement(8947..9345) Beijerinckia indica subsp. indica ATCC 9039 6201432 YP_001831160.1 CDS Bind_0012 NC_010581.1 9744 10217 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bbk:BARBAKC583_0805 thioredoxin family protein; alkyl hydroperoxide reductase complement(9744..10217) Beijerinckia indica subsp. indica ATCC 9039 6201496 YP_001831161.1 CDS Bind_0013 NC_010581.1 10660 14382 D KEGG: mex:Mext_2985 hypothetical protein; hypothetical protein 10660..14382 Beijerinckia indica subsp. indica ATCC 9039 6200712 YP_001831162.1 CDS Bind_0014 NC_010581.1 14538 16481 D PFAM: phosphoesterase; KEGG: aba:Acid345_2127 phosphoesterase; phosphoesterase 14538..16481 Beijerinckia indica subsp. indica ATCC 9039 6198616 YP_001831163.1 CDS Bind_0015 NC_010581.1 16797 18278 D KEGG: spe:Spro_0124 hypothetical protein; hypothetical protein 16797..18278 Beijerinckia indica subsp. indica ATCC 9039 6201707 YP_001831164.1 CDS Bind_0016 NC_010581.1 18360 19787 R PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_C7472 aldehyde dehydrogenase; aldehyde dehydrogenase complement(18360..19787) Beijerinckia indica subsp. indica ATCC 9039 6199409 YP_001831165.1 CDS Bind_0017 NC_010581.1 19888 20514 D PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7473 transcriptional regulator, TetR family; TetR family transcriptional regulator 19888..20514 Beijerinckia indica subsp. indica ATCC 9039 6201503 YP_001831166.1 CDS Bind_0018 NC_010581.1 20652 21485 R hypothetical protein complement(20652..21485) Beijerinckia indica subsp. indica ATCC 9039 6201598 YP_001831167.1 CDS Bind_0019 NC_010581.1 21485 22681 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: gme:Gmet_3140 DNA adenine methylase; D12 class N6 adenine-specific DNA methyltransferase complement(21485..22681) Beijerinckia indica subsp. indica ATCC 9039 6201421 YP_001831168.1 CDS Bind_0020 NC_010581.1 22725 23990 R KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase complement(22725..23990) Beijerinckia indica subsp. indica ATCC 9039 6201445 YP_001831169.1 CDS anmK NC_010581.1 24079 25302 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 24079..25302 Beijerinckia indica subsp. indica ATCC 9039 6201568 YP_001831170.1 CDS Bind_0022 NC_010581.1 25411 25632 D hypothetical protein 25411..25632 Beijerinckia indica subsp. indica ATCC 9039 6201430 YP_001831171.1 CDS Bind_0023 NC_010581.1 25723 26049 R hypothetical protein complement(25723..26049) Beijerinckia indica subsp. indica ATCC 9039 6198958 YP_001831172.1 CDS Bind_0024 NC_010581.1 26639 27619 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mca:MCA1165 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 26639..27619 Beijerinckia indica subsp. indica ATCC 9039 6198455 YP_001831173.1 CDS Bind_0025 NC_010581.1 27769 28857 R PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein complement(27769..28857) Beijerinckia indica subsp. indica ATCC 9039 6199263 YP_001831174.1 CDS Bind_0026 NC_010581.1 29298 29627 D KEGG: rle:RL0365 hypothetical protein; hypothetical protein 29298..29627 Beijerinckia indica subsp. indica ATCC 9039 6200711 YP_001831175.1 CDS Bind_0027 NC_010581.1 29947 30522 D PFAM: regulatory protein TetR; KEGG: scl:sce2153 transcriptional regulator, TetR family; TetR family transcriptional regulator 29947..30522 Beijerinckia indica subsp. indica ATCC 9039 6200847 YP_001831176.1 CDS Bind_0028 NC_010581.1 30519 31511 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: pla:Plav_1506 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase 30519..31511 Beijerinckia indica subsp. indica ATCC 9039 6200659 YP_001831177.1 CDS Bind_0029 NC_010581.1 31894 32730 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4288 short chain dehydrogenase; short chain dehydrogenase 31894..32730 Beijerinckia indica subsp. indica ATCC 9039 6200648 YP_001831178.1 CDS Bind_0030 NC_010581.1 32743 33768 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS03889 probable transcription regulator protein; AraC family transcriptional regulator 32743..33768 Beijerinckia indica subsp. indica ATCC 9039 6201177 YP_001831179.1 CDS Bind_0031 NC_010581.1 33829 34503 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: nar:Saro_1849 NAD-dependent epimerase/dehydratase; hypothetical protein 33829..34503 Beijerinckia indica subsp. indica ATCC 9039 6199723 YP_001831180.1 CDS Bind_0032 NC_010581.1 34593 35495 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kra:Krad_2789 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(34593..35495) Beijerinckia indica subsp. indica ATCC 9039 6199563 YP_001831181.1 CDS Bind_0033 NC_010581.1 35593 36258 D PFAM: regulatory protein TetR; KEGG: kra:Krad_2790 transcriptional regulator, TetR family; TetR family transcriptional regulator 35593..36258 Beijerinckia indica subsp. indica ATCC 9039 6201414 YP_001831182.1 CDS Bind_0034 NC_010581.1 36650 37558 R PFAM: alpha/beta hydrolase fold; KEGG: gbe:GbCGDNIH1_1155 carboxylesterase; alpha/beta hydrolase fold protein complement(36650..37558) Beijerinckia indica subsp. indica ATCC 9039 6201613 YP_001831183.1 CDS Bind_0035 NC_010581.1 37555 38016 R KEGG: gbe:GbCGDNIH1_1154 hypothetical secreted protein; hypothetical protein complement(37555..38016) Beijerinckia indica subsp. indica ATCC 9039 6198872 YP_001831184.1 CDS Bind_0036 NC_010581.1 38013 38675 R KEGG: gbe:GbCGDNIH1_1153 hypothetical cytosolic protein; hypothetical protein complement(38013..38675) Beijerinckia indica subsp. indica ATCC 9039 6201579 YP_001831185.1 CDS Bind_0037 NC_010581.1 39217 40068 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msm:MSMEG_1114 short chain dehydrogenase; short chain dehydrogenase 39217..40068 Beijerinckia indica subsp. indica ATCC 9039 6201559 YP_001831186.1 CDS Bind_0038 NC_010581.1 40125 40589 D KEGG: rso:RS03893 putative signal peptide protein; putative signal peptide protein 40125..40589 Beijerinckia indica subsp. indica ATCC 9039 6201540 YP_001831187.1 CDS Bind_0039 NC_010581.1 40669 40974 D KEGG: mes:Meso_0915 methyltransferase type 12; hypothetical protein 40669..40974 Beijerinckia indica subsp. indica ATCC 9039 6201529 YP_001831188.1 CDS Bind_0040 NC_010581.1 41211 42062 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4288 short chain dehydrogenase; short chain dehydrogenase 41211..42062 Beijerinckia indica subsp. indica ATCC 9039 6200290 YP_001831189.1 CDS Bind_0041 NC_010581.1 42077 43486 D PFAM: Aldehyde Dehydrogenase_; KEGG: cak:Caul_4341 aldehyde dehydrogenase_; aldehyde dehydrogenase 42077..43486 Beijerinckia indica subsp. indica ATCC 9039 6198397 YP_001831190.1 CDS Bind_0042 NC_010581.1 43489 44523 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS03889 probable transcription regulator protein; AraC family transcriptional regulator 43489..44523 Beijerinckia indica subsp. indica ATCC 9039 6200919 YP_001831191.1 CDS Bind_0043 NC_010581.1 44583 45068 D KEGG: pla:Plav_0855 male sterility domain; hypothetical protein 44583..45068 Beijerinckia indica subsp. indica ATCC 9039 6201406 YP_001831192.1 CDS Bind_0044 NC_010581.1 45089 45247 D hypothetical protein 45089..45247 Beijerinckia indica subsp. indica ATCC 9039 6201563 YP_001831193.1 CDS Bind_0045 NC_010581.1 45890 46147 R KEGG: atc:AGR_C_1076 hypothetical protein; hypothetical protein complement(45890..46147) Beijerinckia indica subsp. indica ATCC 9039 6201712 YP_001831194.1 CDS Bind_0046 NC_010581.1 46376 46528 R hypothetical protein complement(46376..46528) Beijerinckia indica subsp. indica ATCC 9039 6201175 YP_001831195.1 CDS Bind_0047 NC_010581.1 46724 48316 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(46724..48316) Beijerinckia indica subsp. indica ATCC 9039 6201587 YP_001831196.1 CDS Bind_0048 NC_010581.1 48563 50029 D PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpe:RPE_1394 transcriptional regulator, XRE family; XRE family transcriptional regulator 48563..50029 Beijerinckia indica subsp. indica ATCC 9039 6201201 YP_001831197.1 CDS Bind_0049 NC_010581.1 50242 50538 D KEGG: sco:SCO3894 transmembrane protein; hypothetical protein 50242..50538 Beijerinckia indica subsp. indica ATCC 9039 6200856 YP_001831198.1 CDS Bind_0050 NC_010581.1 50754 52025 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: atc:AGR_L_2454 diaminopimelate decarboxylase; diaminopimelate decarboxylase 50754..52025 Beijerinckia indica subsp. indica ATCC 9039 6199503 YP_001831199.1 CDS Bind_0051 NC_010581.1 52060 54639 D KEGG: mex:Mext_1537 hypothetical protein; hypothetical protein 52060..54639 Beijerinckia indica subsp. indica ATCC 9039 6198581 YP_001831200.1 CDS Bind_0052 NC_010581.1 54725 55258 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(54725..55258) Beijerinckia indica subsp. indica ATCC 9039 6200945 YP_001831201.1 CDS Bind_0053 NC_010581.1 55508 57445 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(55508..57445) Beijerinckia indica subsp. indica ATCC 9039 6201433 YP_001831202.1 CDS Bind_0054 NC_010581.1 57445 57657 R hypothetical protein complement(57445..57657) Beijerinckia indica subsp. indica ATCC 9039 6200807 YP_001831203.1 CDS Bind_0055 NC_010581.1 58350 59234 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1149 transcriptional regulator; LysR family transcriptional regulator complement(58350..59234) Beijerinckia indica subsp. indica ATCC 9039 6200817 YP_001831204.1 CDS Bind_0056 NC_010581.1 59373 60353 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_1092 thioredoxin reductase; thioredoxin reductase complement(59373..60353) Beijerinckia indica subsp. indica ATCC 9039 6198837 YP_001831205.1 CDS Bind_0057 NC_010581.1 60563 61072 R PFAM: protein of unknown function DUF992; KEGG: azc:AZC_3134 hypothetical protein; hypothetical protein complement(60563..61072) Beijerinckia indica subsp. indica ATCC 9039 6198574 YP_001831206.1 CDS Bind_0058 NC_010581.1 61410 61811 D PFAM: GtrA family protein; KEGG: azc:AZC_1144 hypothetical protein; GtrA family protein 61410..61811 Beijerinckia indica subsp. indica ATCC 9039 6198962 YP_001831207.1 CDS Bind_0059 NC_010581.1 61823 62071 R KEGG: xau:Xaut_2953 hypothetical protein; hypothetical protein complement(61823..62071) Beijerinckia indica subsp. indica ATCC 9039 6199383 YP_001831208.1 CDS Bind_0060 NC_010581.1 62473 63378 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(62473..63378) Beijerinckia indica subsp. indica ATCC 9039 6200130 YP_001831209.1 CDS Bind_0061 NC_010581.1 63730 64293 R PFAM: regulatory protein TetR; KEGG: bja:blr7984 transcriptional regulatory protein; TetR family transcriptional regulator complement(63730..64293) Beijerinckia indica subsp. indica ATCC 9039 6198462 YP_001831210.1 CDS Bind_0062 NC_010581.1 64407 65102 D PFAM: Glutathione S-transferase domain; KEGG: bja:bll7983 glutathione transferase; glutathione S-transferase domain-containing protein 64407..65102 Beijerinckia indica subsp. indica ATCC 9039 6199043 YP_001831211.1 CDS Bind_0063 NC_010581.1 65496 67340 D PFAM: thiamine biosynthesis protein ThiC; KEGG: acr:Acry_0965 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 65496..67340 Beijerinckia indica subsp. indica ATCC 9039 6199142 YP_001831212.1 CDS Bind_0064 NC_010581.1 67663 67932 D hypothetical protein 67663..67932 Beijerinckia indica subsp. indica ATCC 9039 6200771 YP_001831213.1 CDS Bind_0065 NC_010581.1 68109 69485 D PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rme:Rmet_5902 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 68109..69485 Beijerinckia indica subsp. indica ATCC 9039 6200365 YP_001831214.1 CDS Bind_0066 NC_010581.1 69482 70237 D PFAM: Ethanolamine ammonia-lyase light chain; KEGG: sma:SAV4545 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase 69482..70237 Beijerinckia indica subsp. indica ATCC 9039 6201029 YP_001831215.1 CDS Bind_0067 NC_010581.1 70335 70622 D KEGG: mex:Mext_3988 hypothetical protein; hypothetical protein 70335..70622 Beijerinckia indica subsp. indica ATCC 9039 6201615 YP_001831216.1 CDS Bind_0068 NC_010581.1 70630 71103 R PFAM: protein of unknown function DUF1052; KEGG: rpa:RPA0570 hypothetical protein; hypothetical protein complement(70630..71103) Beijerinckia indica subsp. indica ATCC 9039 6201250 YP_001831217.1 CDS Bind_0069 NC_010581.1 71133 71771 R hypothetical protein complement(71133..71771) Beijerinckia indica subsp. indica ATCC 9039 6201325 YP_001831218.1 CDS Bind_0070 NC_010581.1 71849 73807 R KEGG: mmr:Mmar10_2450 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit complement(71849..73807) Beijerinckia indica subsp. indica ATCC 9039 6201636 YP_001831219.1 CDS Bind_0071 NC_010581.1 73807 74715 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(73807..74715) Beijerinckia indica subsp. indica ATCC 9039 6201150 YP_001831220.1 CDS Bind_0072 NC_010581.1 74925 76265 R KEGG: xau:Xaut_2720 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(74925..76265) Beijerinckia indica subsp. indica ATCC 9039 6200914 YP_001831221.1 CDS Bind_0073 NC_010581.1 76589 79420 R TIGRFAM: outer membrane autotransporter barrel domain protein; KEGG: rpd:RPD_1013 outer membrane autotransporter barrel; outer membrane autotransporter complement(76589..79420) Beijerinckia indica subsp. indica ATCC 9039 6201519 YP_001831222.1 CDS Bind_0074 NC_010581.1 80216 83644 D PFAM: helicase domain protein; KEGG: mex:Mext_4394 helicase domain protein; helicase domain-containing protein 80216..83644 Beijerinckia indica subsp. indica ATCC 9039 6201416 YP_001831223.1 CDS Bind_0075 NC_010581.1 84000 84200 D KEGG: reu:Reut_B4493 hypothetical protein; hypothetical protein 84000..84200 Beijerinckia indica subsp. indica ATCC 9039 6201462 YP_001831224.1 CDS Bind_0076 NC_010581.1 84190 85686 D PFAM: Na+/solute symporter; KEGG: bja:bll5890 monocarboxylic acid permease; Na+/solute symporter 84190..85686 Beijerinckia indica subsp. indica ATCC 9039 6201391 YP_001831225.1 CDS Bind_0077 NC_010581.1 86073 86612 D KEGG: xau:Xaut_1175 hypothetical protein; hypothetical protein 86073..86612 Beijerinckia indica subsp. indica ATCC 9039 6201203 YP_001831226.1 CDS Bind_0078 NC_010581.1 86726 86947 R hypothetical protein complement(86726..86947) Beijerinckia indica subsp. indica ATCC 9039 6200829 YP_001831227.1 CDS Bind_0079 NC_010581.1 87352 88554 D PFAM: aminotransferase class I and II; KEGG: oan:Oant_1672 aminotransferase class I and II; class I and II aminotransferase 87352..88554 Beijerinckia indica subsp. indica ATCC 9039 6201616 YP_001831228.1 CDS Bind_0080 NC_010581.1 88607 90139 R PFAM: chemotaxis sensory transducer; KEGG: ccr:CC_0428 methyl-accepting chemotaxis protein McpB; methyl-accepting chemotaxis sensory transducer complement(88607..90139) Beijerinckia indica subsp. indica ATCC 9039 6201055 YP_001831229.1 CDS Bind_0081 NC_010581.1 90246 91397 R PFAM: high-affinity nickel-transporter; KEGG: rpb:RPB_4543 high-affinity nickel-transporter; high-affinity nickel-transporter complement(90246..91397) Beijerinckia indica subsp. indica ATCC 9039 6200830 YP_001831230.1 CDS Bind_0082 NC_010581.1 91491 92222 R PFAM: protein of unknown function DUF1007; KEGG: azc:AZC_0694 hypothetical protein; hypothetical protein complement(91491..92222) Beijerinckia indica subsp. indica ATCC 9039 6201497 YP_001831231.1 CDS Bind_0083 NC_010581.1 92599 96162 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 92599..96162 Beijerinckia indica subsp. indica ATCC 9039 6200879 YP_001831232.1 CDS Bind_0084 NC_010581.1 96172 96708 R PFAM: globin; KEGG: rpa:RPA3708 globin-like protein; globin complement(96172..96708) Beijerinckia indica subsp. indica ATCC 9039 6201672 YP_001831233.1 CDS Bind_0085 NC_010581.1 97040 97165 D TIGRFAM: ribosomal protein L36; KEGG: nwi:Nwi_0983 ribosomal protein L36; 50S ribosomal protein L36 97040..97165 Beijerinckia indica subsp. indica ATCC 9039 6201376 YP_001831234.1 CDS Bind_0086 NC_010581.1 97256 98179 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll7547 hypothetical protein; hypothetical protein 97256..98179 Beijerinckia indica subsp. indica ATCC 9039 6201402 YP_001831235.1 CDS Bind_0087 NC_010581.1 98679 100817 D PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: acr:Acry_0387 glycosyltransferase sugar-binding region containing DXD motif; glycosyl transferase family protein 98679..100817 Beijerinckia indica subsp. indica ATCC 9039 6201488 YP_001831236.1 CDS Bind_0088 NC_010581.1 101066 101818 R PFAM: glycosyl transferase family 2; KEGG: pmh:P9215_12991 hypothetical protein; glycosyl transferase family protein complement(101066..101818) Beijerinckia indica subsp. indica ATCC 9039 6201498 YP_001831237.1 CDS Bind_0089 NC_010581.1 102176 103288 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: reh:H16_B2164 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 102176..103288 Beijerinckia indica subsp. indica ATCC 9039 6200841 YP_001831238.1 CDS Bind_0090 NC_010581.1 103285 104181 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: gdi:GDI3479 putative nucleoside-diphosphate-sugar epimerase dehydratase protein; NAD-dependent epimerase/dehydratase 103285..104181 Beijerinckia indica subsp. indica ATCC 9039 6201558 YP_001831239.1 CDS Bind_0091 NC_010581.1 104195 104758 R KEGG: bcs:BCAN_A0104 hypothetical protein; hypothetical protein complement(104195..104758) Beijerinckia indica subsp. indica ATCC 9039 6201393 YP_001831240.1 CDS Bind_0092 NC_010581.1 104888 105544 R TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: xau:Xaut_2494 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase complement(104888..105544) Beijerinckia indica subsp. indica ATCC 9039 6201315 YP_001831241.1 CDS Bind_0093 NC_010581.1 105955 106665 D PFAM: protein of unknown function DUF1013; KEGG: azc:AZC_1470 hypothetical protein; hypothetical protein 105955..106665 Beijerinckia indica subsp. indica ATCC 9039 6201548 YP_001831242.1 CDS Bind_0094 NC_010581.1 106869 107210 D hypothetical protein 106869..107210 Beijerinckia indica subsp. indica ATCC 9039 6201628 YP_001831243.1 CDS Bind_0095 NC_010581.1 107644 108300 R PFAM: Intracellular septation protein A; KEGG: smd:Smed_3090 intracellular septation protein A; intracellular septation protein A complement(107644..108300) Beijerinckia indica subsp. indica ATCC 9039 6198279 YP_001831244.1 CDS Bind_0096 NC_010581.1 108409 109101 R KEGG: mex:Mext_3975 conserved hypothetical protein; putative alpha/beta hydrolase domain; hypothetical protein complement(108409..109101) Beijerinckia indica subsp. indica ATCC 9039 6198489 YP_001831245.1 CDS Bind_0097 NC_010581.1 109805 110986 D PFAM: aminotransferase class V; KEGG: bja:blr4338 cysteine desulfurase; class V aminotransferase 109805..110986 Beijerinckia indica subsp. indica ATCC 9039 6201644 YP_001831246.1 CDS Bind_0098 NC_010581.1 111090 112610 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: azc:AZC_1044 FeS assembly SufB protein; FeS assembly protein SufB 111090..112610 Beijerinckia indica subsp. indica ATCC 9039 6201061 YP_001831247.1 CDS Bind_0099 NC_010581.1 112922 113677 D KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 112922..113677 Beijerinckia indica subsp. indica ATCC 9039 6201582 YP_001831248.1 CDS Bind_0100 NC_010581.1 113704 115038 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability; FeS assembly protein SufD 113704..115038 Beijerinckia indica subsp. indica ATCC 9039 6201528 YP_001831249.1 CDS Bind_0101 NC_010581.1 115208 116452 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bra:BRADO5444 cysteine desulfurase; SufS subfamily cysteine desulfurase 115208..116452 Beijerinckia indica subsp. indica ATCC 9039 6200918 YP_001831250.1 CDS Bind_0102 NC_010581.1 116470 116862 D PFAM: protein of unknown function DUF59; KEGG: hne:HNE_2613 hypothetical protein; hypothetical protein 116470..116862 Beijerinckia indica subsp. indica ATCC 9039 6201286 YP_001831251.1 CDS Bind_0103 NC_010581.1 117065 117439 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_3609 HesB protein; iron-sulfur cluster assembly accessory protein 117065..117439 Beijerinckia indica subsp. indica ATCC 9039 6201542 YP_001831252.1 CDS Bind_0104 NC_010581.1 117724 118578 D KEGG: gdi:GDI0015 putative shikimate dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; shikimate 5-dehydrogenase 117724..118578 Beijerinckia indica subsp. indica ATCC 9039 6201690 YP_001831253.1 CDS Bind_0105 NC_010581.1 118665 120113 R KEGG: gdi:GDI0016 putative sugar transporter protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter complement(118665..120113) Beijerinckia indica subsp. indica ATCC 9039 6200772 YP_001831254.1 CDS Bind_0106 NC_010581.1 120432 121886 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mes:Meso_1773 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase complement(120432..121886) Beijerinckia indica subsp. indica ATCC 9039 6201460 YP_001831255.1 CDS Bind_0107 NC_010581.1 122304 123137 R PFAM: iron permease FTR1; KEGG: bra:BRADO0319 conserved hypothetical protein; putative high-affinity Fe2+/Pb2+ permease; iron permease FTR1 complement(122304..123137) Beijerinckia indica subsp. indica ATCC 9039 6200860 YP_001831256.1 CDS Bind_0108 NC_010581.1 123668 124402 D PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: azc:AZC_3727 outer membrane protein Omp31 precursor; porin 123668..124402 Beijerinckia indica subsp. indica ATCC 9039 6200710 YP_001831257.1 CDS Bind_0110 NC_010581.1 125255 127021 R KEGG: gdi:GDI1498 putative chemoreceptor McpA; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(125255..127021) Beijerinckia indica subsp. indica ATCC 9039 6200721 YP_001831258.1 CDS Bind_0111 NC_010581.1 127512 128558 R KEGG: bja:blr2721 probable serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(127512..128558) Beijerinckia indica subsp. indica ATCC 9039 6201716 YP_001831259.1 CDS Bind_0112 NC_010581.1 128940 129374 D PFAM: cytochrome c prime; KEGG: rpe:RPE_3086 cytochrome c, class II; cytochrome c prime 128940..129374 Beijerinckia indica subsp. indica ATCC 9039 6199651 YP_001831260.1 CDS Bind_0113 NC_010581.1 129371 130096 D PFAM: cytochrome B561; KEGG: rpe:RPE_3087 cytochrome b561; cytochrome B561 129371..130096 Beijerinckia indica subsp. indica ATCC 9039 6201428 YP_001831261.1 CDS Bind_0114 NC_010581.1 130073 131155 R PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase; group 1 glycosyl transferase complement(130073..131155) Beijerinckia indica subsp. indica ATCC 9039 6201602 YP_001831262.1 CDS Bind_0115 NC_010581.1 131157 131969 R PFAM: metallophosphoesterase; KEGG: xau:Xaut_4108 metallophosphoesterase; metallophosphoesterase complement(131157..131969) Beijerinckia indica subsp. indica ATCC 9039 6199904 YP_001831263.1 CDS Bind_0116 NC_010581.1 132371 132988 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4469 helix-turn-helix domain protein; XRE family transcriptional regulator 132371..132988 Beijerinckia indica subsp. indica ATCC 9039 6201394 YP_001831264.1 CDS Bind_0117 NC_010581.1 133040 134305 D PFAM: aminotransferase class-III; KEGG: swi:Swit_3034 aminotransferase class-III; class III aminotransferase 133040..134305 Beijerinckia indica subsp. indica ATCC 9039 6200623 YP_001831265.1 CDS Bind_0118 NC_010581.1 134392 135882 R KEGG: gdi:GDI0639 hypothetical protein; hypothetical protein complement(134392..135882) Beijerinckia indica subsp. indica ATCC 9039 6201459 YP_001831266.1 CDS Bind_0119 NC_010581.1 136076 137218 R PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1720 putative pyruvate dehydrogenase E2 component; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(136076..137218) Beijerinckia indica subsp. indica ATCC 9039 6201532 YP_001831267.1 CDS Bind_0120 NC_010581.1 137215 138240 R PFAM: Transketolase central region; Transketolase domain protein; KEGG: gdi:GDI1721 putative pyruvate dehydrogenase E1 component subunit beta; transketolase central region complement(137215..138240) Beijerinckia indica subsp. indica ATCC 9039 6201614 YP_001831268.1 CDS Bind_0121 NC_010581.1 138252 139217 R PFAM: dehydrogenase E1 component; KEGG: gdi:GDI1722 putative pyruvate dehydrogenase E1 component subunit alpha; pyruvate dehydrogenase complement(138252..139217) Beijerinckia indica subsp. indica ATCC 9039 6201561 YP_001831269.1 CDS Bind_0122 NC_010581.1 139904 143272 D PFAM: acriflavin resistance protein; KEGG: gbe:GbCGDNIH1_0231 acriflavin resistance plasma membrane protein; acriflavin resistance protein 139904..143272 Beijerinckia indica subsp. indica ATCC 9039 6198760 YP_001831270.1 CDS Bind_0123 NC_010581.1 143272 144525 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gdi:GDI3850 secretion protein, HlyD-family; RND family efflux transporter MFP subunit 143272..144525 Beijerinckia indica subsp. indica ATCC 9039 6198828 YP_001831271.1 CDS Bind_0124 NC_010581.1 144522 146099 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mca:MCA0176 outer membrane efflux protein; RND efflux system outer membrane lipoprotein 144522..146099 Beijerinckia indica subsp. indica ATCC 9039 6199617 YP_001831272.1 CDS Bind_0125 NC_010581.1 147095 147952 D KEGG: rle:pRL110441 putative phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 147095..147952 Beijerinckia indica subsp. indica ATCC 9039 6201476 YP_001831273.1 CDS Bind_0126 NC_010581.1 147977 148681 R KEGG: mex:Mext_4766 hypothetical protein; hypothetical protein complement(147977..148681) Beijerinckia indica subsp. indica ATCC 9039 6200818 YP_001831274.1 CDS Bind_0127 NC_010581.1 148825 149850 R KEGG: mex:Mext_2959 hypothetical protein; hypothetical protein complement(148825..149850) Beijerinckia indica subsp. indica ATCC 9039 6201569 YP_001831275.1 CDS Bind_0128 NC_010581.1 150289 152187 D KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 150289..152187 Beijerinckia indica subsp. indica ATCC 9039 6201543 YP_001831276.1 CDS Bind_0129 NC_010581.1 152599 153717 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ; chaperone protein DnaJ 152599..153717 Beijerinckia indica subsp. indica ATCC 9039 6201448 YP_001831277.1 CDS Bind_0130 NC_010581.1 153939 154733 D SMART: ribosomal RNA adenine methylase transferase; KEGG: azc:AZC_0161 phospholipid N-methyltransferase; ribosomal RNA adenine methylase transferase 153939..154733 Beijerinckia indica subsp. indica ATCC 9039 6201556 YP_001831278.1 CDS Bind_0131 NC_010581.1 154730 155485 D KEGG: mex:Mext_1520 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 154730..155485 Beijerinckia indica subsp. indica ATCC 9039 6200053 YP_001831279.1 CDS Bind_0132 NC_010581.1 155522 156337 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 155522..156337 Beijerinckia indica subsp. indica ATCC 9039 6201446 YP_001831280.1 CDS ruvB NC_010581.1 156383 157435 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 156383..157435 Beijerinckia indica subsp. indica ATCC 9039 6199432 YP_001831281.1 CDS Bind_0134 NC_010581.1 157457 159502 R PFAM: Fusaric acid resistance protein conserved region; KEGG: bra:BRADO4669 putative efflux transporter permease; putative fusaric acid resistance pump; fusaric acid resistance protein region complement(157457..159502) Beijerinckia indica subsp. indica ATCC 9039 6201724 YP_001831282.1 CDS Bind_0135 NC_010581.1 159499 159972 R PFAM: regulatory protein MarR; KEGG: bvi:Bcep1808_5466 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(159499..159972) Beijerinckia indica subsp. indica ATCC 9039 6200889 YP_001831283.1 CDS Bind_0136 NC_010581.1 160278 161213 D PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4588 glycosyl transferase, family 2; glycosyl transferase family protein 160278..161213 Beijerinckia indica subsp. indica ATCC 9039 6200669 YP_001831284.1 CDS Bind_0137 NC_010581.1 161253 164000 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(161253..164000) Beijerinckia indica subsp. indica ATCC 9039 6201285 YP_001831285.1 CDS Bind_0138 NC_010581.1 164257 167055 D PFAM: phosphoenolpyruvate carboxylase; KEGG: ajs:Ajs_2889 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 164257..167055 Beijerinckia indica subsp. indica ATCC 9039 6198215 YP_001831286.1 CDS Bind_0139 NC_010581.1 167209 169008 D PFAM: AMP-dependent synthetase and ligase; KEGG: ppg:PputGB1_4083 amino acid adenylation domain protein; AMP-dependent synthetase and ligase 167209..169008 Beijerinckia indica subsp. indica ATCC 9039 6201588 YP_001831287.1 CDS Bind_0140 NC_010581.1 169130 169663 R PFAM: Ferritin Dps family protein; KEGG: gdi:GDI0826 ferritin-like protein; ferritin Dps family protein complement(169130..169663) Beijerinckia indica subsp. indica ATCC 9039 6199635 YP_001831288.1 CDS Bind_0141 NC_010581.1 170001 171875 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_2752 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(170001..171875) Beijerinckia indica subsp. indica ATCC 9039 6200932 YP_001831289.1 CDS Bind_0142 NC_010581.1 172047 173600 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein; two component, sigma54 specific, Fis family transcriptional regulator complement(172047..173600) Beijerinckia indica subsp. indica ATCC 9039 6198968 YP_001831290.1 CDS Bind_0143 NC_010581.1 174279 174536 D hypothetical protein 174279..174536 Beijerinckia indica subsp. indica ATCC 9039 6199445 YP_001831291.1 CDS Bind_0144 NC_010581.1 174770 175036 D hypothetical protein 174770..175036 Beijerinckia indica subsp. indica ATCC 9039 6199030 YP_001831292.1 CDS Bind_0145 NC_010581.1 175153 177234 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: noc:Noc_1156 peptidase S9, prolyl oligopeptidase active site region; peptidase S9 prolyl oligopeptidase 175153..177234 Beijerinckia indica subsp. indica ATCC 9039 6198571 YP_001831293.1 CDS Bind_0146 NC_010581.1 177222 177740 R KEGG: pth:PTH_0205 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(177222..177740) Beijerinckia indica subsp. indica ATCC 9039 6198533 YP_001831294.1 CDS Bind_0147 NC_010581.1 177733 178506 R KEGG: rpe:RPE_1857 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(177733..178506) Beijerinckia indica subsp. indica ATCC 9039 6201567 YP_001831295.1 CDS Bind_0148 NC_010581.1 178808 179002 D KEGG: bbt:BBta_1138 hypothetical protein; hypothetical protein 178808..179002 Beijerinckia indica subsp. indica ATCC 9039 6201495 YP_001831296.1 CDS Bind_0149 NC_010581.1 179040 179630 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rle:RL4317 putative cobalamin adenosultransferase; ATP--cobalamin adenosyltransferase 179040..179630 Beijerinckia indica subsp. indica ATCC 9039 6200598 YP_001831297.1 CDS Bind_0150 NC_010581.1 179901 181118 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 179901..181118 Beijerinckia indica subsp. indica ATCC 9039 6199570 YP_001831298.1 CDS Bind_0151 NC_010581.1 181115 182074 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase; ornithine carbamoyltransferase 181115..182074 Beijerinckia indica subsp. indica ATCC 9039 6201859 YP_001831299.1 CDS hslO NC_010581.1 182071 183048 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 182071..183048 Beijerinckia indica subsp. indica ATCC 9039 6201068 YP_001831300.1 CDS Bind_0153 NC_010581.1 183052 183591 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(183052..183591) Beijerinckia indica subsp. indica ATCC 9039 6200855 YP_001831301.1 CDS Bind_0154 NC_010581.1 184015 184533 D TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_2957 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 184015..184533 Beijerinckia indica subsp. indica ATCC 9039 6199422 YP_001831302.1 CDS Bind_0155 NC_010581.1 184653 185909 D PFAM: Cytochrome b/b6 domain; KEGG: azc:AZC_3500 cytochrome b/c1; cytochrome b/b6 domain-containing protein 184653..185909 Beijerinckia indica subsp. indica ATCC 9039 6198241 YP_001831303.1 CDS Bind_0156 NC_010581.1 186077 186934 D PFAM: cytochrome c1; KEGG: rpd:RPD_1303 cytochrome c1; cytochrome c1 186077..186934 Beijerinckia indica subsp. indica ATCC 9039 6200755 YP_001831304.1 CDS Bind_0157 NC_010581.1 187010 187975 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(187010..187975) Beijerinckia indica subsp. indica ATCC 9039 6200859 YP_001831305.1 CDS Bind_0158 NC_010581.1 188182 189057 D Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 188182..189057 Beijerinckia indica subsp. indica ATCC 9039 6201002 YP_001831306.1 CDS Bind_0159 NC_010581.1 189054 189593 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 189054..189593 Beijerinckia indica subsp. indica ATCC 9039 6201455 YP_001831307.1 CDS Bind_0160 NC_010581.1 189641 190315 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2149 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 189641..190315 Beijerinckia indica subsp. indica ATCC 9039 6201472 YP_001831308.1 CDS Bind_0161 NC_010581.1 190404 191636 D PFAM: metallophosphoesterase; KEGG: rpd:RPD_3627 metallophosphoesterase; metallophosphoesterase 190404..191636 Beijerinckia indica subsp. indica ATCC 9039 6201477 YP_001831309.1 CDS Bind_0162 NC_010581.1 191659 195204 D KEGG: rpd:RPD_3628 hypothetical protein; hypothetical protein 191659..195204 Beijerinckia indica subsp. indica ATCC 9039 6201557 YP_001831310.1 CDS Bind_0163 NC_010581.1 195469 195696 R hypothetical protein complement(195469..195696) Beijerinckia indica subsp. indica ATCC 9039 6198127 YP_001831311.1 CDS Bind_0164 NC_010581.1 195851 197071 R PFAM: Patatin; KEGG: pnu:Pnuc_1086 patatin; patatin complement(195851..197071) Beijerinckia indica subsp. indica ATCC 9039 6198216 YP_001831312.1 CDS Bind_0166 NC_010581.1 197691 198161 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_4481 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 197691..198161 Beijerinckia indica subsp. indica ATCC 9039 6198373 YP_001831313.1 CDS Bind_0167 NC_010581.1 198162 198980 D PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mex:Mext_4482 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 198162..198980 Beijerinckia indica subsp. indica ATCC 9039 6201407 YP_001831314.1 CDS Bind_0168 NC_010581.1 199001 199711 R KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(199001..199711) Beijerinckia indica subsp. indica ATCC 9039 6201390 YP_001831315.1 CDS Bind_0169 NC_010581.1 199723 200727 R PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 MaoC domain protein dehydratase; dehydratase complement(199723..200727) Beijerinckia indica subsp. indica ATCC 9039 6198810 YP_001831316.1 CDS Bind_0170 NC_010581.1 200897 201994 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(200897..201994) Beijerinckia indica subsp. indica ATCC 9039 6201420 YP_001831317.1 CDS Bind_0171 NC_010581.1 202299 203282 D KEGG: ppg:PputGB1_1966 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 202299..203282 Beijerinckia indica subsp. indica ATCC 9039 6201413 YP_001831318.1 CDS Bind_0172 NC_010581.1 203510 205195 D KEGG: mex:Mext_3817 hypothetical protein; hypothetical protein 203510..205195 Beijerinckia indica subsp. indica ATCC 9039 6201746 YP_001831319.1 CDS Bind_0173 NC_010581.1 205282 206178 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: oan:Oant_1403 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(205282..206178) Beijerinckia indica subsp. indica ATCC 9039 6201759 YP_001831320.1 CDS Bind_0174 NC_010581.1 206349 207512 D PFAM: iron-containing alcohol dehydrogenase; KEGG: sal:Sala_0308 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 206349..207512 Beijerinckia indica subsp. indica ATCC 9039 6201649 YP_001831321.1 CDS Bind_0175 NC_010581.1 207527 209056 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 207527..209056 Beijerinckia indica subsp. indica ATCC 9039 6201819 YP_001831322.1 CDS Bind_0176 NC_010581.1 209216 210619 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: scl:sce2728 permease of the major facilitator superfamily,putative sugar transporter; major facilitator transporter 209216..210619 Beijerinckia indica subsp. indica ATCC 9039 6199555 YP_001831323.1 CDS Bind_0177 NC_010581.1 210690 212168 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bch:Bcen2424_2586 xylulokinase; xylulokinase complement(210690..212168) Beijerinckia indica subsp. indica ATCC 9039 6201327 YP_001831324.1 CDS Bind_0178 NC_010581.1 212571 213314 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH00969 probable zinc ABC transporter, ATP-binding protein; ABC transporter-like protein 212571..213314 Beijerinckia indica subsp. indica ATCC 9039 6200200 YP_001831325.1 CDS Bind_0179 NC_010581.1 213323 214195 D PFAM: ABC-3 protein; KEGG: rle:RL1048 putative transmembrane component of ABC transporter; ABC-3 protein 213323..214195 Beijerinckia indica subsp. indica ATCC 9039 6200735 YP_001831326.1 CDS Bind_0180 NC_010581.1 214201 215106 D PFAM: periplasmic solute binding protein; KEGG: ret:RHE_CH00971 probable zinc ABC transporter, substrate-binding protein; periplasmic solute binding protein 214201..215106 Beijerinckia indica subsp. indica ATCC 9039 6198328 YP_001831327.1 CDS Bind_0181 NC_010581.1 215277 216266 R KEGG: gdi:GDI0039 hypothetical protein; hypothetical protein complement(215277..216266) Beijerinckia indica subsp. indica ATCC 9039 6198184 YP_001831328.1 CDS Bind_0183 NC_010581.1 216679 217983 R PFAM: sodium:dicarboxylate symporter; KEGG: xau:Xaut_1774 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(216679..217983) Beijerinckia indica subsp. indica ATCC 9039 6198194 YP_001831329.1 CDS Bind_0184 NC_010581.1 218280 220094 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azc:AZC_3013 two-component sensor histidine kinase protein; histidine kinase 218280..220094 Beijerinckia indica subsp. indica ATCC 9039 6200374 YP_001831330.1 CDS Bind_0185 NC_010581.1 220094 221434 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azc:AZC_3012 two component response regulator; two component, sigma54 specific, Fis family transcriptional regulator 220094..221434 Beijerinckia indica subsp. indica ATCC 9039 6198705 YP_001831331.1 CDS Bind_0186 NC_010581.1 221573 222784 D PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_5036 putative metallo-hydrolase/oxidoreductase; beta-lactamase domain-containing protein 221573..222784 Beijerinckia indica subsp. indica ATCC 9039 6200172 YP_001831332.1 CDS Bind_0187 NC_010581.1 222814 223422 R PFAM: regulatory protein TetR; KEGG: mlo:mlr5353 transcriptional regulator; TetR family transcriptional regulator complement(222814..223422) Beijerinckia indica subsp. indica ATCC 9039 6200101 YP_001831333.1 CDS Bind_0188 NC_010581.1 223491 223739 R hypothetical protein complement(223491..223739) Beijerinckia indica subsp. indica ATCC 9039 6200146 YP_001831334.1 CDS Bind_0189 NC_010581.1 223785 223946 R hypothetical protein complement(223785..223946) Beijerinckia indica subsp. indica ATCC 9039 6198144 YP_001831335.1 CDS Bind_0190 NC_010581.1 224108 224269 R hypothetical protein complement(224108..224269) Beijerinckia indica subsp. indica ATCC 9039 6200472 YP_001831336.1 CDS Bind_0191 NC_010581.1 224578 226485 D PFAM: CBS domain containing protein; Chloride channel core; KEGG: bcs:BCAN_A0498 chloride channel protein ClcB-like protein; chloride channel core protein 224578..226485 Beijerinckia indica subsp. indica ATCC 9039 6200213 YP_001831337.1 CDS Bind_0192 NC_010581.1 226502 227305 D KEGG: pnu:Pnuc_0538 hypothetical protein; hypothetical protein 226502..227305 Beijerinckia indica subsp. indica ATCC 9039 6200209 YP_001831338.1 CDS Bind_0193 NC_010581.1 227299 228882 R PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2121 outer membrane efflux protein; outer membrane efflux protein complement(227299..228882) Beijerinckia indica subsp. indica ATCC 9039 6200405 YP_001831339.1 CDS Bind_0194 NC_010581.1 228869 230851 R PFAM: Fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_B2120 conserved hypothetical membrane protein, putative efflux pump; fusaric acid resistance protein region complement(228869..230851) Beijerinckia indica subsp. indica ATCC 9039 6199753 YP_001831340.1 CDS Bind_0195 NC_010581.1 230868 231956 R with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN complement(230868..231956) Beijerinckia indica subsp. indica ATCC 9039 6200173 YP_001831341.1 CDS Bind_0196 NC_010581.1 231953 232276 R KEGG: bxe:Bxe_B2118 hypothetical protein; hypothetical protein complement(231953..232276) Beijerinckia indica subsp. indica ATCC 9039 6198989 YP_001831342.1 CDS Bind_0197 NC_010581.1 232382 233179 R PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: swi:Swit_2867 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B complement(232382..233179) Beijerinckia indica subsp. indica ATCC 9039 6201262 YP_001831343.1 CDS Bind_0198 NC_010581.1 233198 234406 R KEGG: gme:Gmet_2448 hypothetical protein; hypothetical protein complement(233198..234406) Beijerinckia indica subsp. indica ATCC 9039 6201847 YP_001831344.1 CDS Bind_0199 NC_010581.1 234723 235949 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0563 acetate kinase; acetate kinase 234723..235949 Beijerinckia indica subsp. indica ATCC 9039 6200880 YP_001831345.1 CDS Bind_0200 NC_010581.1 236097 237086 R PFAM: phosphate acetyl/butaryl transferase; KEGG: bch:Bcen2424_4872 phosphate acetyltransferase; phosphate butyryltransferase complement(236097..237086) Beijerinckia indica subsp. indica ATCC 9039 6201082 YP_001831346.1 CDS Bind_0201 NC_010581.1 237089 237874 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(237089..237874) Beijerinckia indica subsp. indica ATCC 9039 6198948 YP_001831347.1 CDS Bind_0202 NC_010581.1 238077 240443 R KEGG: bbt:BBta_3001 hypothetical protein; hypothetical protein complement(238077..240443) Beijerinckia indica subsp. indica ATCC 9039 6199558 YP_001831348.1 CDS Bind_0203 NC_010581.1 241450 242490 D PFAM: Di-haem cytochrome c peroxidase; KEGG: gsu:GSU2813 cytochrome c551 peroxidase; cytochrome-c peroxidase 241450..242490 Beijerinckia indica subsp. indica ATCC 9039 6201074 YP_001831349.1 CDS Bind_0204 NC_010581.1 242617 242988 R hypothetical protein complement(242617..242988) Beijerinckia indica subsp. indica ATCC 9039 6198467 YP_001831350.1 CDS Bind_0205 NC_010581.1 243099 243470 R KEGG: mex:Mext_4746 hypothetical protein; hypothetical protein complement(243099..243470) Beijerinckia indica subsp. indica ATCC 9039 6199031 YP_001831351.1 CDS Bind_0206 NC_010581.1 243740 244285 D TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: rpe:RPE_2812 riboflavin synthase; 6,7-dimethyl-8-ribityllumazine synthase 243740..244285 Beijerinckia indica subsp. indica ATCC 9039 6198312 YP_001831352.1 CDS Bind_0207 NC_010581.1 244317 244784 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rpa:RPA2729 transcription antitermination protein NusB; NusB antitermination factor 244317..244784 Beijerinckia indica subsp. indica ATCC 9039 6198671 YP_001831353.1 CDS Bind_0208 NC_010581.1 244798 245793 D KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 244798..245793 Beijerinckia indica subsp. indica ATCC 9039 6198971 YP_001831354.1 CDS hppA NC_010581.1 246019 248157 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 246019..248157 Beijerinckia indica subsp. indica ATCC 9039 6198751 YP_001831355.1 CDS Bind_0210 NC_010581.1 248333 249238 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: nha:Nham_1059 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 248333..249238 Beijerinckia indica subsp. indica ATCC 9039 6198639 YP_001831356.1 CDS Bind_0211 NC_010581.1 249425 250363 D KEGG: rru:Rru_A0792 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 249425..250363 Beijerinckia indica subsp. indica ATCC 9039 6200720 YP_001831357.1 CDS Bind_0212 NC_010581.1 250609 250758 D hypothetical protein 250609..250758 Beijerinckia indica subsp. indica ATCC 9039 6199959 YP_001831358.1 CDS Bind_0213 NC_010581.1 250848 251837 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: atc:AGR_C_543 cysteine synthase A; cysteine synthase 250848..251837 Beijerinckia indica subsp. indica ATCC 9039 6200824 YP_001831359.1 CDS Bind_0214 NC_010581.1 252107 252232 D hypothetical protein 252107..252232 Beijerinckia indica subsp. indica ATCC 9039 6199645 YP_001831360.1 CDS Bind_0215 NC_010581.1 252475 253476 D PFAM: PfkB domain protein; KEGG: nwi:Nwi_0218 PfkB; ribokinase-like domain-containing protein 252475..253476 Beijerinckia indica subsp. indica ATCC 9039 6201035 YP_001831361.1 CDS Bind_0216 NC_010581.1 253564 254169 R KEGG: bja:blr0495 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit complement(253564..254169) Beijerinckia indica subsp. indica ATCC 9039 6199891 YP_001831362.1 CDS atpC NC_010581.1 254603 255007 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(254603..255007) Beijerinckia indica subsp. indica ATCC 9039 6199397 YP_001831363.1 CDS Bind_0218 NC_010581.1 255157 256605 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(255157..256605) Beijerinckia indica subsp. indica ATCC 9039 6199812 YP_001831364.1 CDS Bind_0219 NC_010581.1 256632 257513 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(256632..257513) Beijerinckia indica subsp. indica ATCC 9039 6198337 YP_001831365.1 CDS Bind_0220 NC_010581.1 257652 259181 R KEGG: bbt:BBta_0406 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit; ATP synthase F1 subunit alpha complement(257652..259181) Beijerinckia indica subsp. indica ATCC 9039 6200538 YP_001831366.1 CDS Bind_0221 NC_010581.1 259181 259753 R KEGG: azc:AZC_4128 H+-transporting two-sector ATPase delta (OSCP) subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta complement(259181..259753) Beijerinckia indica subsp. indica ATCC 9039 6201163 YP_001831367.1 CDS Bind_0222 NC_010581.1 260062 261084 R TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: rpc:RPC_0286 DNA polymerase III subunit delta; DNA polymerase III subunit delta complement(260062..261084) Beijerinckia indica subsp. indica ATCC 9039 6199276 YP_001831368.1 CDS Bind_0223 NC_010581.1 261303 261725 R KEGG: bja:bll6206 hypothetical protein; hypothetical protein complement(261303..261725) Beijerinckia indica subsp. indica ATCC 9039 6198879 YP_001831369.1 CDS Bind_0224 NC_010581.1 262172 262711 R KEGG: mex:Mext_1588 hypothetical protein; hypothetical protein complement(262172..262711) Beijerinckia indica subsp. indica ATCC 9039 6201757 YP_001831370.1 CDS Bind_0225 NC_010581.1 262698 265379 R TIGRFAM: leucyl-tRNA synthetase; KEGG: rpd:RPD_0436 leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(262698..265379) Beijerinckia indica subsp. indica ATCC 9039 6198698 YP_001831371.1 CDS Bind_0226 NC_010581.1 265435 266127 D PFAM: alanine racemase domain protein; KEGG: bbt:BBta_0174 putative exported protein of unknown function; alanine racemase domain-containing protein 265435..266127 Beijerinckia indica subsp. indica ATCC 9039 6200447 YP_001831372.1 CDS Bind_0227 NC_010581.1 266331 267443 D KEGG: jan:Jann_1817 hypothetical protein; hypothetical protein 266331..267443 Beijerinckia indica subsp. indica ATCC 9039 6200117 YP_001831373.1 CDS Bind_0228 NC_010581.1 267464 268141 R KEGG: mex:Mext_1577 hypothetical protein; hypothetical protein complement(267464..268141) Beijerinckia indica subsp. indica ATCC 9039 6198412 YP_001831374.1 CDS Bind_0229 NC_010581.1 268501 269187 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azc:AZC_0090 response regulator receiver; two component transcriptional regulator 268501..269187 Beijerinckia indica subsp. indica ATCC 9039 6201157 YP_001831375.1 CDS Bind_0230 NC_010581.1 269476 269928 D PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding; cyclic nucleotide-binding protein 269476..269928 Beijerinckia indica subsp. indica ATCC 9039 6201120 YP_001831376.1 CDS Bind_0231 NC_010581.1 269918 270163 D hypothetical protein 269918..270163 Beijerinckia indica subsp. indica ATCC 9039 6200035 YP_001831377.1 CDS Bind_0232 NC_010581.1 270471 271742 D hypothetical protein 270471..271742 Beijerinckia indica subsp. indica ATCC 9039 6200445 YP_001831378.1 CDS Bind_0233 NC_010581.1 271858 272667 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: nwi:Nwi_2038 TonB like protein; TonB family protein complement(271858..272667) Beijerinckia indica subsp. indica ATCC 9039 6198129 YP_001831379.1 CDS Bind_0234 NC_010581.1 272702 273235 R TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bme:BMEI0364 biopolymer transport ExbD protein; TonB system transport protein ExbD complement(272702..273235) Beijerinckia indica subsp. indica ATCC 9039 6200941 YP_001831380.1 CDS Bind_0235 NC_010581.1 273238 274305 R TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: xau:Xaut_4273 TonB-system energizer ExbB type-1; tonB-system energizer ExbB complement(273238..274305) Beijerinckia indica subsp. indica ATCC 9039 6198696 YP_001831381.1 CDS Bind_0236 NC_010581.1 274471 275151 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: azc:AZC_3753 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase complement(274471..275151) Beijerinckia indica subsp. indica ATCC 9039 6198972 YP_001831382.1 CDS Bind_0237 NC_010581.1 275239 276546 R PFAM: PepSY-associated TM helix domain protein; KEGG: nha:Nham_0971 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(275239..276546) Beijerinckia indica subsp. indica ATCC 9039 6198292 YP_001831383.1 CDS Bind_0238 NC_010581.1 276861 279194 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_4578 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 276861..279194 Beijerinckia indica subsp. indica ATCC 9039 6201415 YP_001831384.1 CDS Bind_0239 NC_010581.1 279202 279582 R hypothetical protein complement(279202..279582) Beijerinckia indica subsp. indica ATCC 9039 6200794 YP_001831385.1 CDS Bind_0240 NC_010581.1 279751 280092 R PFAM: CsbD family protein; KEGG: bra:BRADO1086 conserved hypothetical protein, hypothetical UPF0337 protein; CsbD family protein complement(279751..280092) Beijerinckia indica subsp. indica ATCC 9039 6198154 YP_001831386.1 CDS Bind_0241 NC_010581.1 280246 281238 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(280246..281238) Beijerinckia indica subsp. indica ATCC 9039 6199778 YP_001831387.1 CDS Bind_0242 NC_010581.1 281228 281548 R TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bra:BRADO0217 phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-ATP diphosphatase complement(281228..281548) Beijerinckia indica subsp. indica ATCC 9039 6199286 YP_001831388.1 CDS Bind_0243 NC_010581.1 281553 282383 R TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pla:Plav_1233 imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(281553..282383) Beijerinckia indica subsp. indica ATCC 9039 6200246 YP_001831389.1 CDS Bind_0244 NC_010581.1 282840 283886 D PFAM: protein of unknown function DUF475; KEGG: nar:Saro_2044 protein of unknown function DUF475; hypothetical protein 282840..283886 Beijerinckia indica subsp. indica ATCC 9039 6198272 YP_001831390.1 CDS Bind_0245 NC_010581.1 284018 284440 R PFAM: Class I peptide chain release factor; KEGG: pla:Plav_0634 class I peptide chain release factor; class I peptide chain release factor complement(284018..284440) Beijerinckia indica subsp. indica ATCC 9039 6201084 YP_001831391.1 CDS Bind_0246 NC_010581.1 284477 285205 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(284477..285205) Beijerinckia indica subsp. indica ATCC 9039 6200825 YP_001831392.1 CDS Bind_0247 NC_010581.1 285202 285882 R TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: azc:AZC_4500 imidazole glycerol phosphate synthase; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(285202..285882) Beijerinckia indica subsp. indica ATCC 9039 6200453 YP_001831393.1 CDS Bind_0248 NC_010581.1 285879 286442 R KEGG: rpc:RPC_0305 hypothetical protein; hypothetical protein complement(285879..286442) Beijerinckia indica subsp. indica ATCC 9039 6198534 YP_001831394.1 CDS hisB NC_010581.1 286478 287065 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(286478..287065) Beijerinckia indica subsp. indica ATCC 9039 6198259 YP_001831395.1 CDS Bind_0250 NC_010581.1 287367 287960 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 287367..287960 Beijerinckia indica subsp. indica ATCC 9039 6199568 YP_001831396.1 CDS hslU NC_010581.1 288011 289318 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 288011..289318 Beijerinckia indica subsp. indica ATCC 9039 6198307 YP_001831397.1 CDS Bind_0252 NC_010581.1 289534 290091 R KEGG: mex:Mext_2857 hypothetical protein; hypothetical protein complement(289534..290091) Beijerinckia indica subsp. indica ATCC 9039 6199860 YP_001831398.1 CDS Bind_0253 NC_010581.1 290386 291324 R KEGG: bbt:BBta_2002 hydrogenase expression/formation; hypothetical protein complement(290386..291324) Beijerinckia indica subsp. indica ATCC 9039 6198214 YP_001831399.1 CDS Bind_0254 NC_010581.1 291789 292394 R TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: oan:Oant_0023 recombination protein RecR; recombination protein RecR complement(291789..292394) Beijerinckia indica subsp. indica ATCC 9039 6200467 YP_001831400.1 CDS Bind_0255 NC_010581.1 292475 292780 R PFAM: conserved hypothetical protein; KEGG: xau:Xaut_2167 hypothetical protein; hypothetical protein complement(292475..292780) Beijerinckia indica subsp. indica ATCC 9039 6201075 YP_001831401.1 CDS Bind_0256 NC_010581.1 293029 294984 R KEGG: azc:AZC_0142 ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(293029..294984) Beijerinckia indica subsp. indica ATCC 9039 6199517 YP_001831402.1 CDS Bind_0257 NC_010581.1 295523 296500 D PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: bxe:Bxe_A2188 putative phosphohydrolase, MutT/NUDIX; NUDIX hydrolase 295523..296500 Beijerinckia indica subsp. indica ATCC 9039 6198615 YP_001831403.1 CDS Bind_0258 NC_010581.1 296560 297285 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: azc:AZC_3675 ExsB protein; exsB protein 296560..297285 Beijerinckia indica subsp. indica ATCC 9039 6198202 YP_001831404.1 CDS Bind_0259 NC_010581.1 297400 298527 D KEGG: scl:sce5181 probable 3-carboxymuconate cyclase; putative 3-carboxymuconate cyclase 297400..298527 Beijerinckia indica subsp. indica ATCC 9039 6199382 YP_001831405.1 CDS Bind_0260 NC_010581.1 298586 300319 R PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb4061 superfamily II DNA and RNA helicase; DEAD/DEAH box helicase complement(298586..300319) Beijerinckia indica subsp. indica ATCC 9039 6198334 YP_001831406.1 CDS Bind_0261 NC_010581.1 300468 300698 R PFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31; 50S ribosomal protein L31 complement(300468..300698) Beijerinckia indica subsp. indica ATCC 9039 6198599 YP_001831407.1 CDS Bind_0262 NC_010581.1 301068 302363 D PFAM: adenylosuccinate synthetase; KEGG: xau:Xaut_0037 adenylosuccinate synthase; adenylosuccinate synthase 301068..302363 Beijerinckia indica subsp. indica ATCC 9039 6199228 YP_001831408.1 CDS Bind_0264 NC_010581.1 304234 304647 R PFAM: helix-turn-helix HxlR type; KEGG: bvi:Bcep1808_5860 transcriptional regulator, HxlR family; HxlR family transcriptional regulator complement(304234..304647) Beijerinckia indica subsp. indica ATCC 9039 6199586 YP_001831409.1 CDS Bind_0265 NC_010581.1 304748 305560 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pst:PSPTO_0819 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 304748..305560 Beijerinckia indica subsp. indica ATCC 9039 6199192 YP_001831410.1 CDS Bind_0266 NC_010581.1 305606 306484 R PFAM: extracellular solute-binding protein family 3; KEGG: nwi:Nwi_0150 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(305606..306484) Beijerinckia indica subsp. indica ATCC 9039 6198605 YP_001831411.1 CDS Bind_0267 NC_010581.1 306960 308525 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_2375 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 306960..308525 Beijerinckia indica subsp. indica ATCC 9039 6198880 YP_001831412.1 CDS Bind_0268 NC_010581.1 308610 309011 R KEGG: nwi:Nwi_0527 hypothetical protein; hypothetical protein complement(308610..309011) Beijerinckia indica subsp. indica ATCC 9039 6200480 YP_001831413.1 CDS Bind_0269 NC_010581.1 309554 311695 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nwi:Nwi_3134 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 309554..311695 Beijerinckia indica subsp. indica ATCC 9039 6199353 YP_001831414.1 CDS Bind_0270 NC_010581.1 311688 313034 R TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: bja:bll7152 translocation protein TolB; beta-propeller repeat-containing to-pal system protein TolB complement(311688..313034) Beijerinckia indica subsp. indica ATCC 9039 6199029 YP_001831415.1 CDS Bind_0271 NC_010581.1 313031 314341 R KEGG: bcs:BCAN_A1737 TolA protein; TolA protein complement(313031..314341) Beijerinckia indica subsp. indica ATCC 9039 6201021 YP_001831416.1 CDS Bind_0272 NC_010581.1 314356 314805 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(314356..314805) Beijerinckia indica subsp. indica ATCC 9039 6198692 YP_001831417.1 CDS Bind_0273 NC_010581.1 314860 315585 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA1117 TolQ protein, inner membrane protein, tolerance to group A colicins; protein TolQ complement(314860..315585) Beijerinckia indica subsp. indica ATCC 9039 6199587 YP_001831418.1 CDS Bind_0275 NC_010581.1 316993 317574 R PFAM: regulatory protein TetR; KEGG: bam:Bamb_6109 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(316993..317574) Beijerinckia indica subsp. indica ATCC 9039 6199072 YP_001831419.1 CDS Bind_0276 NC_010581.1 317656 318960 D PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6110 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 317656..318960 Beijerinckia indica subsp. indica ATCC 9039 6199588 YP_001831420.1 CDS Bind_0277 NC_010581.1 319223 319657 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: azc:AZC_0520 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(319223..319657) Beijerinckia indica subsp. indica ATCC 9039 6199603 YP_001831421.1 CDS Bind_0278 NC_010581.1 319794 320003 R PFAM: TOBE domain protein; KEGG: rpa:RPA4719 molybdo-pterin binding protein; TOBE domain-containing protein complement(319794..320003) Beijerinckia indica subsp. indica ATCC 9039 6198431 YP_001831422.1 CDS Bind_0279 NC_010581.1 320330 321190 D TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: rpd:RPD_1188 ModD protein; modD protein 320330..321190 Beijerinckia indica subsp. indica ATCC 9039 6199054 YP_001831423.1 CDS Bind_0280 NC_010581.1 321523 322008 D PFAM: TOBE domain protein; KEGG: bra:BRADO1761 hypothetical protein; putative molybdenum ABC transporter (ATP-binding protein) (C-ter fragment); TOBE domain-containing protein 321523..322008 Beijerinckia indica subsp. indica ATCC 9039 6201814 YP_001831424.1 CDS Bind_0281 NC_010581.1 321938 322342 R PFAM: regulatory protein LysR; KEGG: bra:BRADO1762 putative transcriptional regulatory protein, LysR family; putative molybdenum transport regulator, ModE; ModE family transcriptional regulator complement(321938..322342) Beijerinckia indica subsp. indica ATCC 9039 6199071 YP_001831425.1 CDS Bind_0282 NC_010581.1 322555 323439 R KEGG: rpa:RPA4634 hypothetical protein; hypothetical protein complement(322555..323439) Beijerinckia indica subsp. indica ATCC 9039 6200450 YP_001831426.1 CDS Bind_0283 NC_010581.1 323750 324418 R PFAM: dienelactone hydrolase; KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase complement(323750..324418) Beijerinckia indica subsp. indica ATCC 9039 6200554 YP_001831427.1 CDS Bind_0284 NC_010581.1 324592 325755 R PFAM: fatty acid desaturase; KEGG: cme:CMP318C sphingolipid delta 4 desaturase protein DES-1; fatty acid desaturase complement(324592..325755) Beijerinckia indica subsp. indica ATCC 9039 6200424 YP_001831428.1 CDS Bind_0285 NC_010581.1 325977 327308 R PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1567 glycosyl transferase, family 2; glycosyl transferase family protein complement(325977..327308) Beijerinckia indica subsp. indica ATCC 9039 6200741 YP_001831429.1 CDS Bind_0286 NC_010581.1 327629 328432 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(327629..328432) Beijerinckia indica subsp. indica ATCC 9039 6200997 YP_001831430.1 CDS Bind_0287 NC_010581.1 328422 328901 R PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_B2727 putative MaoC-like dehydratase; dehydratase complement(328422..328901) Beijerinckia indica subsp. indica ATCC 9039 6200823 YP_001831431.1 CDS Bind_0288 NC_010581.1 329148 329885 R PFAM: manganese containing catalase; KEGG: ava:Ava_3821 manganese containing catalase; manganese containing catalase complement(329148..329885) Beijerinckia indica subsp. indica ATCC 9039 6199918 YP_001831432.1 CDS Bind_0289 NC_010581.1 330432 330620 D KEGG: mex:Mext_0168 hypothetical protein; hypothetical protein 330432..330620 Beijerinckia indica subsp. indica ATCC 9039 6201225 YP_001831433.1 CDS Bind_0290 NC_010581.1 330675 330923 D hypothetical protein 330675..330923 Beijerinckia indica subsp. indica ATCC 9039 6199859 YP_001831434.1 CDS Bind_0291 NC_010581.1 330987 333641 D KEGG: mex:Mext_4055 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicases; excinuclease ABC subunit B 330987..333641 Beijerinckia indica subsp. indica ATCC 9039 6199442 YP_001831435.1 CDS Bind_0292 NC_010581.1 333798 333995 D hypothetical protein 333798..333995 Beijerinckia indica subsp. indica ATCC 9039 6198921 YP_001831436.1 CDS Bind_0293 NC_010581.1 333992 334651 D PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 333992..334651 Beijerinckia indica subsp. indica ATCC 9039 6199441 YP_001831437.1 CDS Bind_0294 NC_010581.1 334798 335643 R PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: mex:Mext_2080 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD complement(334798..335643) Beijerinckia indica subsp. indica ATCC 9039 6198656 YP_001831438.1 CDS Bind_0295 NC_010581.1 335857 338424 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein complement(335857..338424) Beijerinckia indica subsp. indica ATCC 9039 6199222 YP_001831439.1 CDS Bind_0296 NC_010581.1 338684 339829 R TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: xau:Xaut_4432 putative membrane-associated zinc metalloprotease; membrane-associated zinc metalloprotease complement(338684..339829) Beijerinckia indica subsp. indica ATCC 9039 6199075 YP_001831440.1 CDS Bind_0297 NC_010581.1 339940 341169 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(339940..341169) Beijerinckia indica subsp. indica ATCC 9039 6198749 YP_001831441.1 CDS Bind_0298 NC_010581.1 341273 342163 R PFAM: phosphatidate cytidylyltransferase; KEGG: azc:AZC_1698 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(341273..342163) Beijerinckia indica subsp. indica ATCC 9039 6199268 YP_001831442.1 CDS Bind_0299 NC_010581.1 342160 342960 R KEGG: nha:Nham_1698 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(342160..342960) Beijerinckia indica subsp. indica ATCC 9039 6199562 YP_001831443.1 CDS frr NC_010581.1 343239 343799 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(343239..343799) Beijerinckia indica subsp. indica ATCC 9039 6199220 YP_001831444.1 CDS Bind_0301 NC_010581.1 343900 344658 R TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4437 uridylate kinase; uridylate kinase complement(343900..344658) Beijerinckia indica subsp. indica ATCC 9039 6198559 YP_001831445.1 CDS Bind_0302 NC_010581.1 344894 346576 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: gbe:GbCGDNIH1_0354 two component system histidine kinase; integral membrane sensor signal transduction histidine kinase 344894..346576 Beijerinckia indica subsp. indica ATCC 9039 6198558 YP_001831446.1 CDS Bind_0303 NC_010581.1 346582 347064 R PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL110290 putative acetyltransferase; N-acetyltransferase GCN5 complement(346582..347064) Beijerinckia indica subsp. indica ATCC 9039 6200007 YP_001831447.1 CDS Bind_0304 NC_010581.1 347183 347872 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: gbe:GbCGDNIH1_0355 two-component response regulator; two component LuxR family transcriptional regulator 347183..347872 Beijerinckia indica subsp. indica ATCC 9039 6200005 YP_001831448.1 CDS Bind_0305 NC_010581.1 348097 350514 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xau:Xaut_1786 TonB-dependent receptor; TonB-dependent receptor 348097..350514 Beijerinckia indica subsp. indica ATCC 9039 6198433 YP_001831449.1 CDS Bind_0306 NC_010581.1 350657 351532 D PFAM: Chorismate mutase; KEGG: xau:Xaut_0395 chorismate mutase; hypothetical protein 350657..351532 Beijerinckia indica subsp. indica ATCC 9039 6198409 YP_001831450.1 CDS Bind_0307 NC_010581.1 351685 352821 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 351685..352821 Beijerinckia indica subsp. indica ATCC 9039 6198408 YP_001831451.1 CDS Bind_0308 NC_010581.1 352814 353776 D PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: xau:Xaut_0393 arogenate dehydrogenase; arogenate dehydrogenase 352814..353776 Beijerinckia indica subsp. indica ATCC 9039 6199089 YP_001831452.1 CDS Bind_0309 NC_010581.1 353812 354711 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_pAT_270 hypothetical protein; LysR family transcriptional regulator complement(353812..354711) Beijerinckia indica subsp. indica ATCC 9039 6199088 YP_001831453.1 CDS Bind_0310 NC_010581.1 354810 355784 D PFAM: alpha/beta hydrolase fold; KEGG: bja:blr8188 putative dehalogenase; alpha/beta hydrolase fold protein 354810..355784 Beijerinckia indica subsp. indica ATCC 9039 6199028 YP_001831454.1 CDS Bind_0311 NC_010581.1 355939 356919 R PFAM: Ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: gdi:GDI2414 putative inward rectifier potassium channel; K+ channel inward rectifier domain-containing protein complement(355939..356919) Beijerinckia indica subsp. indica ATCC 9039 6198947 YP_001831455.1 CDS Bind_0312 NC_010581.1 357174 357392 D hypothetical protein 357174..357392 Beijerinckia indica subsp. indica ATCC 9039 6199219 YP_001831456.1 CDS Bind_0313 NC_010581.1 357643 358053 D hypothetical protein 357643..358053 Beijerinckia indica subsp. indica ATCC 9039 6199218 YP_001831457.1 CDS Bind_0314 NC_010581.1 358441 359901 D PFAM: outer membrane efflux protein; KEGG: xau:Xaut_4826 outer membrane efflux protein; outer membrane efflux protein 358441..359901 Beijerinckia indica subsp. indica ATCC 9039 6199103 YP_001831458.1 CDS Bind_0315 NC_010581.1 359916 361274 D PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bmu:Bmul_6291 multicopper oxidase type 3; multicopper oxidase type 3 359916..361274 Beijerinckia indica subsp. indica ATCC 9039 6198918 YP_001831459.1 CDS Bind_0316 NC_010581.1 361306 361608 D KEGG: bbt:BBta_p0116 hypothetical protein; hypothetical protein 361306..361608 Beijerinckia indica subsp. indica ATCC 9039 6199224 YP_001831460.1 CDS Bind_0317 NC_010581.1 361811 362329 D KEGG: gvi:glr3185 hypothetical protein; hypothetical protein 361811..362329 Beijerinckia indica subsp. indica ATCC 9039 6199099 YP_001831461.1 CDS rpsU NC_010581.1 362710 362949 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 362710..362949 Beijerinckia indica subsp. indica ATCC 9039 6198693 YP_001831462.1 CDS Bind_0319 NC_010581.1 363146 364051 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_1964 tetratricopeptide TPR_2 repeat protein; hypothetical protein 363146..364051 Beijerinckia indica subsp. indica ATCC 9039 6198652 YP_001831463.1 CDS Bind_0320 NC_010581.1 364293 364835 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_2958 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 364293..364835 Beijerinckia indica subsp. indica ATCC 9039 6200006 YP_001831464.1 CDS Bind_0321 NC_010581.1 364982 366190 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: swi:Swit_2959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 364982..366190 Beijerinckia indica subsp. indica ATCC 9039 6198427 YP_001831465.1 CDS Bind_0322 NC_010581.1 366384 366788 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_3223 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 366384..366788 Beijerinckia indica subsp. indica ATCC 9039 6198464 YP_001831466.1 CDS Bind_0323 NC_010581.1 366749 367003 R hypothetical protein complement(366749..367003) Beijerinckia indica subsp. indica ATCC 9039 6199696 YP_001831467.1 CDS Bind_0324 NC_010581.1 367056 367769 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3409 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(367056..367769) Beijerinckia indica subsp. indica ATCC 9039 6199619 YP_001831468.1 CDS Bind_0325 NC_010581.1 368129 368392 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mag:amb1606 glutaredoxin and related protein; glutaredoxin 3 368129..368392 Beijerinckia indica subsp. indica ATCC 9039 6199531 YP_001831469.1 CDS Bind_0326 NC_010581.1 368770 369747 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2784 putative dehydrogenase; short-chain dehydrogenase/reductase SDR complement(368770..369747) Beijerinckia indica subsp. indica ATCC 9039 6198823 YP_001831470.1 CDS Bind_0327 NC_010581.1 369815 370450 D PFAM: regulatory protein TetR; KEGG: gdi:GDI2783 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 369815..370450 Beijerinckia indica subsp. indica ATCC 9039 6198653 YP_001831471.1 CDS Bind_0328 NC_010581.1 370561 371913 D PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein 370561..371913 Beijerinckia indica subsp. indica ATCC 9039 6198840 YP_001831472.1 CDS Bind_0329 NC_010581.1 372248 375550 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dsy:DSY3421 hypothetical protein; hypothetical protein complement(372248..375550) Beijerinckia indica subsp. indica ATCC 9039 6199034 YP_001831473.1 CDS Bind_0330 NC_010581.1 375724 376209 R hypothetical protein complement(375724..376209) Beijerinckia indica subsp. indica ATCC 9039 6198973 YP_001831474.1 CDS Bind_0331 NC_010581.1 376501 377355 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_0052 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(376501..377355) Beijerinckia indica subsp. indica ATCC 9039 6198451 YP_001831475.1 CDS Bind_0332 NC_010581.1 377348 378571 R PFAM: Beta-ketoacyl synthase; KEGG: xau:Xaut_0053 beta-ketoacyl synthase; Beta-ketoacyl synthase complement(377348..378571) Beijerinckia indica subsp. indica ATCC 9039 6198964 YP_001831476.1 CDS Bind_0333 NC_010581.1 378669 379208 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(378669..379208) Beijerinckia indica subsp. indica ATCC 9039 6199440 YP_001831477.1 CDS Bind_0334 NC_010581.1 379626 380591 D PFAM: import inner membrane translocase subunit Tim44; KEGG: bra:BRADO5022 conserved hypothetical protein; putative signal peptide; import inner membrane translocase subunit Tim44 379626..380591 Beijerinckia indica subsp. indica ATCC 9039 6199533 YP_001831478.1 CDS Bind_0335 NC_010581.1 380797 381672 R KEGG: mlo:mlr0116 integral membrane lipid kinase-like protein; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase complement(380797..381672) Beijerinckia indica subsp. indica ATCC 9039 6199439 YP_001831479.1 CDS Bind_0336 NC_010581.1 381746 381934 R hypothetical protein complement(381746..381934) Beijerinckia indica subsp. indica ATCC 9039 6199093 YP_001831480.1 CDS Bind_0337 NC_010581.1 382025 382630 R PFAM: GrpE protein; KEGG: smd:Smed_0012 ribulose-phosphate 3-epimerase; GrpE protein HSP-70 cofactor complement(382025..382630) Beijerinckia indica subsp. indica ATCC 9039 6198919 YP_001831481.1 CDS Bind_0338 NC_010581.1 382804 383640 R KEGG: xau:Xaut_0977 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor complement(382804..383640) Beijerinckia indica subsp. indica ATCC 9039 6199105 YP_001831482.1 CDS Bind_0339 NC_010581.1 383637 384380 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_0976 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(383637..384380) Beijerinckia indica subsp. indica ATCC 9039 6200004 YP_001831483.1 CDS Bind_0340 NC_010581.1 384474 384866 R PFAM: blue (type 1) copper domain protein; KEGG: xau:Xaut_0975 blue (type 1) copper domain protein; blue (type1) copper domain-containing protein complement(384474..384866) Beijerinckia indica subsp. indica ATCC 9039 6198755 YP_001831484.1 CDS Bind_0341 NC_010581.1 384893 385900 R PFAM: metallophosphoesterase; KEGG: xau:Xaut_0974 metallophosphoesterase; metallophosphoesterase complement(384893..385900) Beijerinckia indica subsp. indica ATCC 9039 6199057 YP_001831485.1 CDS Bind_0342 NC_010581.1 386230 386607 R hypothetical protein complement(386230..386607) Beijerinckia indica subsp. indica ATCC 9039 6198655 YP_001831486.1 CDS Bind_0343 NC_010581.1 386806 387963 D KEGG: sme:SMc02491 hypothetical protein; hypothetical protein 386806..387963 Beijerinckia indica subsp. indica ATCC 9039 6199206 YP_001831487.1 CDS Bind_0344 NC_010581.1 388461 389162 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver; two component transcriptional regulator complement(388461..389162) Beijerinckia indica subsp. indica ATCC 9039 6199205 YP_001831488.1 CDS Bind_0345 NC_010581.1 389585 390331 R PFAM: protein of unknown function DUF28; KEGG: azc:AZC_0510 hypothetical protein; hypothetical protein complement(389585..390331) Beijerinckia indica subsp. indica ATCC 9039 6198748 YP_001831489.1 CDS Bind_0346 NC_010581.1 390458 391153 R PFAM: Glutathione S-transferase domain; KEGG: bpt:Bpet2488 putative glutathione transferase; glutathione S-transferase domain-containing protein complement(390458..391153) Beijerinckia indica subsp. indica ATCC 9039 6199095 YP_001831490.1 CDS Bind_0347 NC_010581.1 391322 392221 R TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpe:RPE_0818 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma-32 subunit RpoH complement(391322..392221) Beijerinckia indica subsp. indica ATCC 9039 6198967 YP_001831491.1 CDS Bind_0348 NC_010581.1 393029 394069 R KEGG: xau:Xaut_1985 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(393029..394069) Beijerinckia indica subsp. indica ATCC 9039 6198477 YP_001831492.1 CDS Bind_0349 NC_010581.1 394223 396025 D responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 394223..396025 Beijerinckia indica subsp. indica ATCC 9039 6198753 YP_001831493.1 CDS Bind_0350 NC_010581.1 396270 396923 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_0103 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 396270..396923 Beijerinckia indica subsp. indica ATCC 9039 6199035 YP_001831494.1 CDS Bind_0351 NC_010581.1 397055 398236 R PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein complement(397055..398236) Beijerinckia indica subsp. indica ATCC 9039 6198710 YP_001831495.1 CDS Bind_0352 NC_010581.1 398768 399910 R PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein complement(398768..399910) Beijerinckia indica subsp. indica ATCC 9039 6199213 YP_001831496.1 CDS Bind_0353 NC_010581.1 399939 400949 R KEGG: sfu:Sfum_0865 radical SAM domain protein; hypothetical protein complement(399939..400949) Beijerinckia indica subsp. indica ATCC 9039 6198945 YP_001831497.1 CDS Bind_0354 NC_010581.1 401158 402939 R PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase; shikimate kinase., 3-dehydroquinate synthase complement(401158..402939) Beijerinckia indica subsp. indica ATCC 9039 6198752 YP_001831498.1 CDS Bind_0355 NC_010581.1 403024 403503 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: xau:Xaut_3765 bacterioferritin; bacterioferritin complement(403024..403503) Beijerinckia indica subsp. indica ATCC 9039 6199104 YP_001831499.1 CDS Bind_0356 NC_010581.1 403801 404094 R KEGG: mex:Mext_1764 hypothetical protein; hypothetical protein complement(403801..404094) Beijerinckia indica subsp. indica ATCC 9039 6199132 YP_001831500.1 CDS Bind_0357 NC_010581.1 404866 406482 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 404866..406482 Beijerinckia indica subsp. indica ATCC 9039 6199289 YP_001831501.1 CDS Bind_0358 NC_010581.1 406828 407607 D TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ilo:IL0792 acetoin(diacetyl) reductase; acetoin reductase 406828..407607 Beijerinckia indica subsp. indica ATCC 9039 6199298 YP_001831502.1 CDS Bind_0359 NC_010581.1 407714 408877 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 407714..408877 Beijerinckia indica subsp. indica ATCC 9039 6199055 YP_001831503.1 CDS Bind_0360 NC_010581.1 408919 409953 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(408919..409953) Beijerinckia indica subsp. indica ATCC 9039 6198594 YP_001831504.1 CDS Bind_0361 NC_010581.1 410160 411386 R KEGG: nwi:Nwi_0316 cell division transporter substrate-binding protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(410160..411386) Beijerinckia indica subsp. indica ATCC 9039 6199621 YP_001831505.1 CDS Bind_0362 NC_010581.1 411599 412261 D KEGG: xau:Xaut_0022 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 411599..412261 Beijerinckia indica subsp. indica ATCC 9039 6199059 YP_001831506.1 CDS Bind_0363 NC_010581.1 412269 413300 D PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2864 protein of unknown function DUF214; hypothetical protein 412269..413300 Beijerinckia indica subsp. indica ATCC 9039 6199532 YP_001831507.1 CDS Bind_0364 NC_010581.1 413757 416798 D KEGG: psa:PST_4184 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 413757..416798 Beijerinckia indica subsp. indica ATCC 9039 6199267 YP_001831508.1 CDS Bind_0365 NC_010581.1 416990 418015 D KEGG: mex:Mext_3338 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 416990..418015 Beijerinckia indica subsp. indica ATCC 9039 6198917 YP_001831509.1 CDS Bind_0366 NC_010581.1 418390 420642 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor; TonB-dependent siderophore receptor 418390..420642 Beijerinckia indica subsp. indica ATCC 9039 6198478 YP_001831510.1 CDS Bind_0367 NC_010581.1 420722 421485 D KEGG: bcs:BCAN_A0546 hypothetical protein; transposase join(420722..421045,421045..421485) Beijerinckia indica subsp. indica ATCC 9039 6199535 YP_001831511.1 CDS Bind_0368 NC_010581.1 422079 422807 D PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3103 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 422079..422807 Beijerinckia indica subsp. indica ATCC 9039 6199049 YP_001831512.1 CDS Bind_0369 NC_010581.1 422900 425248 R PFAM: TonB-dependent receptor; KEGG: azo:azo3844 putative TonB-dependent receptor; TonB-dependent receptor complement(422900..425248) Beijerinckia indica subsp. indica ATCC 9039 6198649 YP_001831513.1 CDS Bind_0370 NC_010581.1 425554 427422 D TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: mex:Mext_2754 oligoendopeptidase, PepF/M3 family; pepF/M3 family oligoendopeptidase 425554..427422 Beijerinckia indica subsp. indica ATCC 9039 6198449 YP_001831514.1 CDS Bind_0371 NC_010581.1 427582 428589 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpd:BURPS668_3127 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase 427582..428589 Beijerinckia indica subsp. indica ATCC 9039 6199042 YP_001831515.1 CDS Bind_0372 NC_010581.1 428599 431142 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: azc:AZC_0109 helicase; DEAD/DEAH box helicase 428599..431142 Beijerinckia indica subsp. indica ATCC 9039 6198954 YP_001831516.1 CDS Bind_0373 NC_010581.1 431192 431923 D KEGG: bja:blr1149 hypothetical protein; hypothetical protein 431192..431923 Beijerinckia indica subsp. indica ATCC 9039 6198953 YP_001831517.1 CDS Bind_0374 NC_010581.1 432423 433220 R KEGG: mes:Meso_2586 hypothetical protein; hypothetical protein complement(432423..433220) Beijerinckia indica subsp. indica ATCC 9039 6198695 YP_001831518.1 CDS Bind_0376 NC_010581.1 433609 434124 R PFAM: histone family protein DNA-binding protein; KEGG: bbt:BBta_4630 integration host factor alpha-subunit (IHF-alpha); histone family protein DNA-binding protein complement(433609..434124) Beijerinckia indica subsp. indica ATCC 9039 6199133 YP_001831519.1 CDS Bind_0377 NC_010581.1 434557 435342 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: xcb:XC_0373 glycerol-3-phosphate regulon repressor; DeoR family transcriptional regulator complement(434557..435342) Beijerinckia indica subsp. indica ATCC 9039 6200256 YP_001831520.1 CDS Bind_0378 NC_010581.1 435676 437295 D PFAM: FAD dependent oxidoreductase; KEGG: rru:Rru_A1508 FAD dependent oxidoreductase; FAD dependent oxidoreductase 435676..437295 Beijerinckia indica subsp. indica ATCC 9039 6198407 YP_001831521.1 CDS Bind_0379 NC_010581.1 437444 438172 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: tma:TM1429 glycerol uptake facilitator protein; MIP family channel protein 437444..438172 Beijerinckia indica subsp. indica ATCC 9039 6199561 YP_001831522.1 CDS Bind_0380 NC_010581.1 438366 439889 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: cau:Caur_3292 glycerol kinase; glycerol kinase 438366..439889 Beijerinckia indica subsp. indica ATCC 9039 6199560 YP_001831523.1 CDS Bind_0381 NC_010581.1 440059 440922 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: sme:SMb21406 hypothetical protein; Ku protein 440059..440922 Beijerinckia indica subsp. indica ATCC 9039 6199106 YP_001831524.1 CDS Bind_0382 NC_010581.1 440927 442861 D TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mes:Meso_1150 ATP dependent DNA ligase; DNA ligase D 440927..442861 Beijerinckia indica subsp. indica ATCC 9039 6199130 YP_001831525.1 CDS Bind_0383 NC_010581.1 442996 443799 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: sme:SMa0426 hypothetical protein; Ku protein 442996..443799 Beijerinckia indica subsp. indica ATCC 9039 6198915 YP_001831526.1 CDS Bind_0384 NC_010581.1 443898 444761 R PFAM: filamentation induced by cAMP protein Fic; KEGG: bhe:BH13400 putative cell filamentation protein; filamentation induced by cAMP protein fic complement(443898..444761) Beijerinckia indica subsp. indica ATCC 9039 6199084 YP_001831527.1 CDS Bind_0385 NC_010581.1 444768 444998 R hypothetical protein complement(444768..444998) Beijerinckia indica subsp. indica ATCC 9039 6199102 YP_001831528.1 CDS Bind_0386 NC_010581.1 445207 445824 D KEGG: azc:AZC_2257 ATP corrinoid adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 445207..445824 Beijerinckia indica subsp. indica ATCC 9039 6199534 YP_001831529.1 CDS Bind_0387 NC_010581.1 445849 447315 D TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: azc:AZC_2258 cobyric acid synthase; cobyric acid synthase CobQ 445849..447315 Beijerinckia indica subsp. indica ATCC 9039 6199098 YP_001831530.1 CDS Bind_0388 NC_010581.1 447299 448312 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: bbt:BBta_3137 cobalamin biosynthetic protein (anaerobic pathway of cobalamin biosynthesis, CobD); cobalamin biosynthesis protein CobD complement(447299..448312) Beijerinckia indica subsp. indica ATCC 9039 6199097 YP_001831531.1 CDS Bind_0389 NC_010581.1 448356 449366 D TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: xau:Xaut_5025 aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase 448356..449366 Beijerinckia indica subsp. indica ATCC 9039 6199096 YP_001831532.1 CDS Bind_0390 NC_010581.1 449704 450255 D KEGG: bcs:BCAN_B0384 hypothetical protein; hypothetical protein 449704..450255 Beijerinckia indica subsp. indica ATCC 9039 6198952 YP_001831533.1 CDS Bind_0391 NC_010581.1 450257 450607 D KEGG: rpc:RPC_3632 hypothetical protein; hypothetical protein 450257..450607 Beijerinckia indica subsp. indica ATCC 9039 6199056 YP_001831534.1 CDS Bind_0392 NC_010581.1 451025 452479 D KEGG: bov:BOV_A0332 hypothetical protein; hypothetical protein 451025..452479 Beijerinckia indica subsp. indica ATCC 9039 6198424 YP_001831535.1 CDS Bind_0393 NC_010581.1 453040 454923 D KEGG: bra:BRADO5449 Mo/Fe nitrogenase specific transcriptional regulator, NifA; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; transcriptional regulator NifA 453040..454923 Beijerinckia indica subsp. indica ATCC 9039 6199209 YP_001831536.1 CDS Bind_0394 NC_010581.1 455322 455516 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_1043 ferredoxin; 4Fe-4S ferredoxin 455322..455516 Beijerinckia indica subsp. indica ATCC 9039 6199208 YP_001831537.1 CDS Bind_0395 NC_010581.1 455603 456409 D PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: gdi:GDI0432 hypothetical protein; LRV FeS4 cluster domain-containing protein 455603..456409 Beijerinckia indica subsp. indica ATCC 9039 6199207 YP_001831538.1 CDS Bind_0396 NC_010581.1 456878 458461 D TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 456878..458461 Beijerinckia indica subsp. indica ATCC 9039 6198825 YP_001831539.1 CDS Bind_0397 NC_010581.1 458553 458771 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_3415 2(4Fe-4S) ferredoxin; 4Fe-4S ferredoxin 458553..458771 Beijerinckia indica subsp. indica ATCC 9039 6198824 YP_001831540.1 CDS Bind_0398 NC_010581.1 458774 459130 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_3416 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 458774..459130 Beijerinckia indica subsp. indica ATCC 9039 6199076 YP_001831541.1 CDS Bind_0399 NC_010581.1 459142 459666 D KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein 459142..459666 Beijerinckia indica subsp. indica ATCC 9039 6198682 YP_001831542.1 CDS Bind_0400 NC_010581.1 459656 460456 D PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bra:BRADO5416 conserved hypothetical protein (superfamily of ARM repeat); LRV protein Fes4 cluster in N-terminus; LRV FeS4 cluster domain-containing protein 459656..460456 Beijerinckia indica subsp. indica ATCC 9039 6199160 YP_001831543.1 CDS Bind_0401 NC_010581.1 460540 460875 D PFAM: NifZ family protein; KEGG: azc:AZC_3419 iron-sulfur cofactor synthesis protein; NifZ family protein 460540..460875 Beijerinckia indica subsp. indica ATCC 9039 6198579 YP_001831544.1 CDS Bind_0402 NC_010581.1 460875 461123 D PFAM: NifZ family protein; KEGG: rpd:RPD_1069 hypothetical protein; NifZ family protein 460875..461123 Beijerinckia indica subsp. indica ATCC 9039 6198406 YP_001831545.1 CDS Bind_0403 NC_010581.1 461390 462526 D PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mca:MCA0212 cysteine desulfurase; class V aminotransferase 461390..462526 Beijerinckia indica subsp. indica ATCC 9039 6199060 YP_001831546.1 CDS Bind_0404 NC_010581.1 462662 462874 D TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mca:MCA0213 hypothetical protein; nitrogen fixation protein FixT 462662..462874 Beijerinckia indica subsp. indica ATCC 9039 6198426 YP_001831547.1 CDS Bind_0405 NC_010581.1 462883 463158 D KEGG: rpc:RPC_4465 hypothetical protein; hypothetical protein 462883..463158 Beijerinckia indica subsp. indica ATCC 9039 6198479 YP_001831548.1 CDS Bind_0406 NC_010581.1 463155 464306 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: xau:Xaut_0120 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 463155..464306 Beijerinckia indica subsp. indica ATCC 9039 6199159 YP_001831549.1 CDS Bind_0407 NC_010581.1 464379 464681 D KEGG: azc:AZC_3424 2Fe-2S ferredoxin; 2Fe-2S ferredoxin 464379..464681 Beijerinckia indica subsp. indica ATCC 9039 6199092 YP_001831550.1 CDS Bind_0408 NC_010581.1 464724 464948 D KEGG: mca:MCA0217 hypothetical protein; hypothetical protein 464724..464948 Beijerinckia indica subsp. indica ATCC 9039 6198423 YP_001831551.1 CDS Bind_0409 NC_010581.1 464948 465802 D KEGG: rpe:RPE_4534 hypothetical protein; hypothetical protein 464948..465802 Beijerinckia indica subsp. indica ATCC 9039 6198975 YP_001831552.1 CDS Bind_0410 NC_010581.1 465959 466393 D PFAM: globin; KEGG: bra:BRADO5406 putative hemoglobin protein (truncated hemoglobin); globin 465959..466393 Beijerinckia indica subsp. indica ATCC 9039 6198974 YP_001831553.1 CDS Bind_0411 NC_010581.1 466377 466967 D KEGG: pna:Pnap_2347 hypothetical protein; hypothetical protein 466377..466967 Beijerinckia indica subsp. indica ATCC 9039 6198577 YP_001831554.1 CDS Bind_0412 NC_010581.1 467032 467679 R TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: xau:Xaut_2059 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(467032..467679) Beijerinckia indica subsp. indica ATCC 9039 6200009 YP_001831555.1 CDS proA NC_010581.1 467654 468949 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(467654..468949) Beijerinckia indica subsp. indica ATCC 9039 6200008 YP_001831556.1 CDS Bind_0414 NC_010581.1 469034 470167 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(469034..470167) Beijerinckia indica subsp. indica ATCC 9039 6199210 YP_001831557.1 CDS Bind_0415 NC_010581.1 470191 471237 R TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: xau:Xaut_2055 GTP-binding protein Obg/CgtA; GTP-binding protein Obg/CgtA complement(470191..471237) Beijerinckia indica subsp. indica ATCC 9039 6199074 YP_001831558.1 CDS Bind_0416 NC_010581.1 471367 472023 R PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(471367..472023) Beijerinckia indica subsp. indica ATCC 9039 6199214 YP_001831559.1 CDS rpmA NC_010581.1 472421 472696 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(472421..472696) Beijerinckia indica subsp. indica ATCC 9039 6199226 YP_001831560.1 CDS rplU NC_010581.1 472737 473048 R PFAM: ribosomal protein L21; KEGG: ret:RHE_CH04062 50S ribosomal protein L21; 50S ribosomal protein L21 complement(472737..473048) Beijerinckia indica subsp. indica ATCC 9039 6198694 YP_001831561.1 CDS Bind_0419 NC_010581.1 473624 475711 D PFAM: Peptidase M23; KEGG: mex:Mext_1023 peptidase M23B; peptidase M23 473624..475711 Beijerinckia indica subsp. indica ATCC 9039 6198651 YP_001831562.1 CDS Bind_0420 NC_010581.1 475886 476440 D PFAM: protein of unknown function DUF925; KEGG: psa:PST_0216 hypothetical protein; hypothetical protein 475886..476440 Beijerinckia indica subsp. indica ATCC 9039 6199291 YP_001831563.1 CDS Bind_0421 NC_010581.1 476488 477147 R KEGG: rru:Rru_A1314 hypothetical protein; hypothetical protein complement(476488..477147) Beijerinckia indica subsp. indica ATCC 9039 6199290 YP_001831564.1 CDS Bind_0422 NC_010581.1 477217 477939 R PFAM: protein of unknown function DUF1345; KEGG: dar:Daro_0590 protein of unknown function DUF1345; hypothetical protein complement(477217..477939) Beijerinckia indica subsp. indica ATCC 9039 6198570 YP_001831565.1 CDS Bind_0423 NC_010581.1 477978 478910 R PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_0205 polyprenyl synthetase; polyprenyl synthetase complement(477978..478910) Beijerinckia indica subsp. indica ATCC 9039 6199285 YP_001831566.1 CDS Bind_0424 NC_010581.1 478979 479689 D TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 478979..479689 Beijerinckia indica subsp. indica ATCC 9039 6198425 YP_001831567.1 CDS rpmF NC_010581.1 479834 480025 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 479834..480025 Beijerinckia indica subsp. indica ATCC 9039 6199288 YP_001831568.1 CDS Bind_0426 NC_010581.1 480156 480881 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpd:RPD_0305 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase complement(480156..480881) Beijerinckia indica subsp. indica ATCC 9039 6199025 YP_001831569.1 CDS Bind_0427 NC_010581.1 481259 482434 R KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(481259..482434) Beijerinckia indica subsp. indica ATCC 9039 6199299 YP_001831570.1 CDS Bind_0428 NC_010581.1 482778 483395 D TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bja:blr0227 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR 482778..483395 Beijerinckia indica subsp. indica ATCC 9039 6199622 YP_001831571.1 CDS Bind_0429 NC_010581.1 483433 483867 R PFAM: protein of unknown function DUF985; KEGG: bja:blr0223 hypothetical protein; hypothetical protein complement(483433..483867) Beijerinckia indica subsp. indica ATCC 9039 6198452 YP_001831572.1 CDS Bind_0430 NC_010581.1 483869 484639 R KEGG: rpe:RPE_0164 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(483869..484639) Beijerinckia indica subsp. indica ATCC 9039 6198916 YP_001831573.1 CDS Bind_0431 NC_010581.1 484897 485670 D PFAM: Methyltransferase type 11; KEGG: mex:Mext_2509 methyltransferase type 11; type 11 methyltransferase 484897..485670 Beijerinckia indica subsp. indica ATCC 9039 6198557 YP_001831574.1 CDS Bind_0432 NC_010581.1 485862 486563 R PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_3842 phospholipase/carboxylesterase; phospholipase/carboxylesterase complement(485862..486563) Beijerinckia indica subsp. indica ATCC 9039 6199444 YP_001831575.1 CDS Bind_0433 NC_010581.1 487082 487984 D PFAM: glutamyl-tRNA synthetase class Ic; KEGG: rpc:RPC_4885 glutamyl-Q tRNA(Asp) synthetase; glutamyl-tRNA synthetase 487082..487984 Beijerinckia indica subsp. indica ATCC 9039 6199086 YP_001831576.1 CDS ispG NC_010581.1 488008 489309 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(488008..489309) Beijerinckia indica subsp. indica ATCC 9039 6200257 YP_001831577.1 CDS Bind_0435 NC_010581.1 490212 491099 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 490212..491099 Beijerinckia indica subsp. indica ATCC 9039 6199100 YP_001831578.1 CDS Bind_0436 NC_010581.1 491257 491640 R hypothetical protein complement(491257..491640) Beijerinckia indica subsp. indica ATCC 9039 6199618 YP_001831579.1 CDS Bind_0437 NC_010581.1 492069 492773 D KEGG: mag:amb3806 spore coat polysaccharide biosynthesis protein F; spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase-like protein 492069..492773 Beijerinckia indica subsp. indica ATCC 9039 6198839 YP_001831580.1 CDS Bind_0438 NC_010581.1 492805 493110 R hypothetical protein complement(492805..493110) Beijerinckia indica subsp. indica ATCC 9039 6198838 YP_001831581.1 CDS Bind_0439 NC_010581.1 493213 494298 R KEGG: azc:AZC_2414 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(493213..494298) Beijerinckia indica subsp. indica ATCC 9039 6198943 YP_001831582.1 CDS Bind_0440 NC_010581.1 494305 494802 R KEGG: bra:BRADO1206 phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AirC); TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(494305..494802) Beijerinckia indica subsp. indica ATCC 9039 6199990 YP_001831583.1 CDS Bind_0441 NC_010581.1 495190 498447 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1840 TPR repeat-containing protein; hypothetical protein complement(495190..498447) Beijerinckia indica subsp. indica ATCC 9039 6199101 YP_001831584.1 CDS Bind_0442 NC_010581.1 498528 498746 R PFAM: protein of unknown function DUF465; KEGG: rpb:RPB_1449 protein of unknown function DUF465; hypothetical protein complement(498528..498746) Beijerinckia indica subsp. indica ATCC 9039 6198922 YP_001831585.1 CDS Bind_0443 NC_010581.1 499167 499352 D PFAM: protein of unknown function DUF465; KEGG: xau:Xaut_2598 protein of unknown function DUF465; hypothetical protein 499167..499352 Beijerinckia indica subsp. indica ATCC 9039 6198541 YP_001831586.1 CDS Bind_0444 NC_010581.1 499499 500317 R TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xau:Xaut_0194 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth complement(499499..500317) Beijerinckia indica subsp. indica ATCC 9039 6198544 YP_001831587.1 CDS Bind_0445 NC_010581.1 500692 501498 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(500692..501498) Beijerinckia indica subsp. indica ATCC 9039 6198543 YP_001831588.1 CDS Bind_0446 NC_010581.1 501734 502465 D PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_1494 phospholipase/carboxylesterase; phospholipase/carboxylesterase 501734..502465 Beijerinckia indica subsp. indica ATCC 9039 6198545 YP_001831589.1 CDS Bind_0447 NC_010581.1 502598 503755 R PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_2255 glycosyltransferases probably involved in cell wall biogenesis-like; glycosyl transferase family protein complement(502598..503755) Beijerinckia indica subsp. indica ATCC 9039 6199131 YP_001831590.1 CDS Bind_0448 NC_010581.1 504108 505031 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO5242 hypothetical protein; putative SAM-dependent methyltransferase domain; type 12 methyltransferase 504108..505031 Beijerinckia indica subsp. indica ATCC 9039 6198580 YP_001831591.1 CDS Bind_0449 NC_010581.1 505107 505814 R PFAM: fatty acid hydroxylase; KEGG: osa:4352850 Os12g0628400; fatty acid hydroxylase complement(505107..505814) Beijerinckia indica subsp. indica ATCC 9039 6198942 YP_001831592.1 CDS mepA NC_010581.1 505981 506937 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(505981..506937) Beijerinckia indica subsp. indica ATCC 9039 6198561 YP_001831593.1 CDS Bind_0451 NC_010581.1 506970 508244 R KEGG: mlo:mlr5650 ceramide glucosyltransferase; ceramide glucosyltransferase complement(506970..508244) Beijerinckia indica subsp. indica ATCC 9039 6198560 YP_001831594.1 CDS Bind_0452 NC_010581.1 508434 509300 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 508434..509300 Beijerinckia indica subsp. indica ATCC 9039 6199221 YP_001831595.1 CDS Bind_0453 NC_010581.1 509389 510165 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(509389..510165) Beijerinckia indica subsp. indica ATCC 9039 6199828 YP_001831596.1 CDS Bind_0454 NC_010581.1 510452 512272 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: xau:Xaut_2798 GTP-binding protein TypA; GTP-binding protein TypA complement(510452..512272) Beijerinckia indica subsp. indica ATCC 9039 6198719 YP_001831597.1 CDS Bind_0455 NC_010581.1 513147 514844 R TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: azc:AZC_2290 putative Na+/phosphate symporter; Na/Pi-cotransporter II-like protein complement(513147..514844) Beijerinckia indica subsp. indica ATCC 9039 6199007 YP_001831598.1 CDS Bind_0456 NC_010581.1 515013 515738 R TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mex:Mext_4827 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(515013..515738) Beijerinckia indica subsp. indica ATCC 9039 6199186 YP_001831599.1 CDS Bind_0457 NC_010581.1 515796 516644 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: nha:Nham_3274 Cof protein; cof family hydrolase complement(515796..516644) Beijerinckia indica subsp. indica ATCC 9039 6198926 YP_001831600.1 CDS Bind_0458 NC_010581.1 516715 518322 R KEGG: mex:Mext_2523 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(516715..518322) Beijerinckia indica subsp. indica ATCC 9039 6199165 YP_001831601.1 CDS Bind_0459 NC_010581.1 518319 519323 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(518319..519323) Beijerinckia indica subsp. indica ATCC 9039 6199317 YP_001831602.1 CDS Bind_0460 NC_010581.1 519488 521584 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: mex:Mext_4501 transketolase; transketolase complement(519488..521584) Beijerinckia indica subsp. indica ATCC 9039 6198746 YP_001831603.1 CDS Bind_0461 NC_010581.1 522152 522874 R KEGG: scl:sce0923 haloacetate dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase complement(522152..522874) Beijerinckia indica subsp. indica ATCC 9039 6198976 YP_001831604.1 CDS Bind_0462 NC_010581.1 523013 523630 R PFAM: Glutathione S-transferase domain; KEGG: scl:sce6962 probable glutathione S-transferase; glutathione S-transferase domain-containing protein complement(523013..523630) Beijerinckia indica subsp. indica ATCC 9039 6198586 YP_001831605.1 CDS Bind_0463 NC_010581.1 523752 524654 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding; LysR family transcriptional regulator 523752..524654 Beijerinckia indica subsp. indica ATCC 9039 6199174 YP_001831606.1 CDS Bind_0464 NC_010581.1 524717 527383 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE; cell division protein FtsK complement(524717..527383) Beijerinckia indica subsp. indica ATCC 9039 6198961 YP_001831607.1 CDS Bind_0465 NC_010581.1 527600 527818 D hypothetical protein 527600..527818 Beijerinckia indica subsp. indica ATCC 9039 6198535 YP_001831608.1 CDS Bind_0466 NC_010581.1 527790 528017 D hypothetical protein 527790..528017 Beijerinckia indica subsp. indica ATCC 9039 6199145 YP_001831609.1 CDS Bind_0467 NC_010581.1 528094 528495 D KEGG: nha:Nham_2959 hypothetical protein; hypothetical protein 528094..528495 Beijerinckia indica subsp. indica ATCC 9039 6199166 YP_001831610.1 CDS Bind_0468 NC_010581.1 528578 529024 R KEGG: xau:Xaut_1672 hypothetical protein; hypothetical protein complement(528578..529024) Beijerinckia indica subsp. indica ATCC 9039 6198506 YP_001831611.1 CDS Bind_0469 NC_010581.1 529130 529948 R PFAM: Rhodanese domain protein; Ankyrin; KEGG: xau:Xaut_0147 rhodanese domain protein; rhodanese domain-containing protein complement(529130..529948) Beijerinckia indica subsp. indica ATCC 9039 6199146 YP_001831612.1 CDS Bind_0470 NC_010581.1 530008 531978 R PFAM: Rhodanese domain protein; KEGG: bbt:BBta_2171 hypothetical protein; rhodanese domain-containing protein complement(530008..531978) Beijerinckia indica subsp. indica ATCC 9039 6200233 YP_001831613.1 CDS Bind_0471 NC_010581.1 531993 532418 R TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: ter:Tery_3773 nitrogenase-associated protein; nitrogenase-associated protein complement(531993..532418) Beijerinckia indica subsp. indica ATCC 9039 6198527 YP_001831614.1 CDS Bind_0472 NC_010581.1 532883 533344 R PFAM: response regulator receiver; KEGG: bbt:BBta_5880 putative transcriptional regulatory protein (protein CheY); response regulator receiver protein complement(532883..533344) Beijerinckia indica subsp. indica ATCC 9039 6199928 YP_001831615.1 CDS nifH NC_010581.1 533912 534784 D nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 533912..534784 Beijerinckia indica subsp. indica ATCC 9039 6199524 YP_001831616.1 CDS Bind_0474 NC_010581.1 534854 536314 D KEGG: azc:AZC_1040 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 534854..536314 Beijerinckia indica subsp. indica ATCC 9039 6200670 YP_001831617.1 CDS Bind_0475 NC_010581.1 536398 537960 D KEGG: xau:Xaut_0090 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 536398..537960 Beijerinckia indica subsp. indica ATCC 9039 6198885 YP_001831618.1 CDS Bind_0476 NC_010581.1 538252 540141 D functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 538252..540141 Beijerinckia indica subsp. indica ATCC 9039 6200010 YP_001831619.1 CDS Bind_0477 NC_010581.1 540154 541533 D KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 540154..541533 Beijerinckia indica subsp. indica ATCC 9039 6200188 YP_001831620.1 CDS Bind_0478 NC_010581.1 541570 541974 D TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: bbt:BBta_5920 nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX 541570..541974 Beijerinckia indica subsp. indica ATCC 9039 6200671 YP_001831621.1 CDS Bind_0479 NC_010581.1 541983 542453 D TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269; nitrogen fixation protein 541983..542453 Beijerinckia indica subsp. indica ATCC 9039 6198720 YP_001831622.1 CDS Bind_0480 NC_010581.1 542480 542680 D PFAM: protein of unknown function DUF683; KEGG: bra:BRADO5433 conserved hypothetical protein (DUF683); hypothetical protein 542480..542680 Beijerinckia indica subsp. indica ATCC 9039 6198812 YP_001831623.1 CDS Bind_0481 NC_010581.1 542707 543018 D TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_1034 ferredoxin; ferredoxin III 542707..543018 Beijerinckia indica subsp. indica ATCC 9039 6198726 YP_001831624.1 CDS Bind_0482 NC_010581.1 543029 543676 D PFAM: NifQ family protein; KEGG: rpd:RPD_1082 NifQ; NifQ family protein 543029..543676 Beijerinckia indica subsp. indica ATCC 9039 6198553 YP_001831625.1 CDS Bind_0483 NC_010581.1 544187 544510 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpd:RPD_1083 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 544187..544510 Beijerinckia indica subsp. indica ATCC 9039 6201284 YP_001831626.1 CDS Bind_0484 NC_010581.1 544521 544841 D PFAM: nitrogen-fixing NifU domain protein; KEGG: rpb:RPB_0980 nitrogen-fixing NifU-like protein; NifU domain-containing protein 544521..544841 Beijerinckia indica subsp. indica ATCC 9039 6198552 YP_001831627.1 CDS Bind_0485 NC_010581.1 544916 546118 D TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rpa:RPA4607 putative homocitrate synthase; homocitrate synthase 544916..546118 Beijerinckia indica subsp. indica ATCC 9039 6198529 YP_001831628.1 CDS Bind_0486 NC_010581.1 546891 547220 D PFAM: nitrogen fixation protein NifW; KEGG: rpd:RPD_1087 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW 546891..547220 Beijerinckia indica subsp. indica ATCC 9039 6198817 YP_001831629.1 CDS Bind_0487 NC_010581.1 547376 548230 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mlo:mll5862 nitrogen fixation protein,FixA; electron transfer flavoprotein alpha/beta-subunit 547376..548230 Beijerinckia indica subsp. indica ATCC 9039 6200528 YP_001831630.1 CDS Bind_0488 NC_010581.1 548256 549368 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: azc:AZC_3448 FixB protein; electron transfer flavoprotein alpha/beta-subunit 548256..549368 Beijerinckia indica subsp. indica ATCC 9039 6198725 YP_001831631.1 CDS Bind_0489 NC_010581.1 549380 550681 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: azc:AZC_3449 protein FixC; electron-transferring-flavoprotein dehydrogenase 549380..550681 Beijerinckia indica subsp. indica ATCC 9039 6199475 YP_001831632.1 CDS Bind_0490 NC_010581.1 550739 551041 D KEGG: xau:Xaut_0139 putative ferredoxin protein, FixX; putative ferredoxin protein, FixX 550739..551041 Beijerinckia indica subsp. indica ATCC 9039 6198903 YP_001831633.1 CDS Bind_0491 NC_010581.1 551248 551733 D PFAM: ferric-uptake regulator; KEGG: azc:AZC_0367 putative Fe2+/Zn2+ uptake regulation protein; ferric uptake regulator family protein 551248..551733 Beijerinckia indica subsp. indica ATCC 9039 6198904 YP_001831634.1 CDS Bind_0492 NC_010581.1 551872 552183 R KEGG: xau:Xaut_2910 hypothetical protein; hypothetical protein complement(551872..552183) Beijerinckia indica subsp. indica ATCC 9039 6198912 YP_001831635.1 CDS Bind_0493 NC_010581.1 552377 552676 D hypothetical protein 552377..552676 Beijerinckia indica subsp. indica ATCC 9039 6200523 YP_001831636.1 CDS Bind_0494 NC_010581.1 552873 553496 D catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 552873..553496 Beijerinckia indica subsp. indica ATCC 9039 6201443 YP_001831637.1 CDS Bind_0495 NC_010581.1 553658 554230 D PFAM: response regulator receiver; KEGG: psa:PST_4184 sensory box histidine kinase/response regulator; response regulator receiver protein 553658..554230 Beijerinckia indica subsp. indica ATCC 9039 6198514 YP_001831638.1 CDS Bind_0496 NC_010581.1 554349 554930 D KEGG: nha:Nham_3693 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 554349..554930 Beijerinckia indica subsp. indica ATCC 9039 6201212 YP_001831639.1 CDS Bind_0497 NC_010581.1 555008 555961 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: azc:AZC_0797 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 555008..555961 Beijerinckia indica subsp. indica ATCC 9039 6198486 YP_001831640.1 CDS truA NC_010581.1 555948 556730 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 555948..556730 Beijerinckia indica subsp. indica ATCC 9039 6198728 YP_001831641.1 CDS Bind_0499 NC_010581.1 556709 557038 R KEGG: nwi:Nwi_0402 hypothetical protein; hypothetical protein complement(556709..557038) Beijerinckia indica subsp. indica ATCC 9039 6201223 YP_001831642.1 CDS Bind_0500 NC_010581.1 557168 557533 R KEGG: gvi:gll2512 hypothetical protein; hypothetical protein complement(557168..557533) Beijerinckia indica subsp. indica ATCC 9039 6200234 YP_001831643.1 CDS Bind_0501 NC_010581.1 557591 557983 R KEGG: azc:AZC_4001 inner membrane protein; inner membrane protein complement(557591..557983) Beijerinckia indica subsp. indica ATCC 9039 6200301 YP_001831644.1 CDS Bind_0502 NC_010581.1 558076 558876 R KEGG: rca:Rcas_3511 hypothetical protein; hypothetical protein complement(558076..558876) Beijerinckia indica subsp. indica ATCC 9039 6199986 YP_001831645.1 CDS Bind_0503 NC_010581.1 559101 560261 D KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 559101..560261 Beijerinckia indica subsp. indica ATCC 9039 6198738 YP_001831646.1 CDS Bind_0504 NC_010581.1 560248 560706 D PFAM: cyclic nucleotide-binding; KEGG: ace:Acel_1016 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 560248..560706 Beijerinckia indica subsp. indica ATCC 9039 6198505 YP_001831647.1 CDS Bind_0505 NC_010581.1 560708 561577 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: scl:sce4573 hydroxylase or oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit 560708..561577 Beijerinckia indica subsp. indica ATCC 9039 6198699 YP_001831648.1 CDS Bind_0506 NC_010581.1 561579 562400 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fra:Francci3_4497 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 561579..562400 Beijerinckia indica subsp. indica ATCC 9039 6198530 YP_001831649.1 CDS Bind_0507 NC_010581.1 562375 563664 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: ace:Acel_1019 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 562375..563664 Beijerinckia indica subsp. indica ATCC 9039 6199452 YP_001831650.1 CDS Bind_0508 NC_010581.1 563661 564203 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 563661..564203 Beijerinckia indica subsp. indica ATCC 9039 6201222 YP_001831651.1 CDS Bind_0510 NC_010581.1 564495 565073 R PFAM: protein of unknown function DUF1058; KEGG: azc:AZC_0237 hypothetical protein; hypothetical protein complement(564495..565073) Beijerinckia indica subsp. indica ATCC 9039 6200131 YP_001831652.1 CDS Bind_0511 NC_010581.1 565360 566355 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_4126 glyoxylate reductase; glyoxylate reductase 565360..566355 Beijerinckia indica subsp. indica ATCC 9039 6201280 YP_001831653.1 CDS Bind_0512 NC_010581.1 566414 566914 D PFAM: heat shock protein Hsp20; KEGG: rpe:RPE_0435 heat shock protein HSP20; heat shock protein Hsp20 566414..566914 Beijerinckia indica subsp. indica ATCC 9039 6200012 YP_001831654.1 CDS Bind_0513 NC_010581.1 567022 567288 D PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150; hypothetical protein 567022..567288 Beijerinckia indica subsp. indica ATCC 9039 6198743 YP_001831655.1 CDS Bind_0514 NC_010581.1 567399 567851 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(567399..567851) Beijerinckia indica subsp. indica ATCC 9039 6200236 YP_001831656.1 CDS Bind_0515 NC_010581.1 568207 569364 D TIGRFAM: methyltransferase FkbM family; KEGG: gbe:GbCGDNIH1_1535 methyltransferase; FkbM family methyltransferase 568207..569364 Beijerinckia indica subsp. indica ATCC 9039 6199306 YP_001831657.1 CDS Bind_0516 NC_010581.1 569493 571271 D KEGG: mex:Mext_3709 hypothetical protein; hypothetical protein 569493..571271 Beijerinckia indica subsp. indica ATCC 9039 6201444 YP_001831658.1 CDS Bind_0517 NC_010581.1 571299 572318 D KEGG: eba:ebA1583 hypothetical protein; hypothetical protein 571299..572318 Beijerinckia indica subsp. indica ATCC 9039 6200011 YP_001831659.1 CDS Bind_0518 NC_010581.1 572403 573428 R PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3168 glycosyl transferase, family 2; glycosyl transferase family protein complement(572403..573428) Beijerinckia indica subsp. indica ATCC 9039 6200704 YP_001831660.1 CDS Bind_0519 NC_010581.1 573425 574126 R KEGG: spc:Sputcn32_3895 hypothetical protein; hypothetical protein complement(573425..574126) Beijerinckia indica subsp. indica ATCC 9039 6200242 YP_001831661.1 CDS Bind_0520 NC_010581.1 574119 575618 R PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3169 glycosyl transferase, group 1; group 1 glycosyl transferase complement(574119..575618) Beijerinckia indica subsp. indica ATCC 9039 6198701 YP_001831662.1 CDS Bind_0521 NC_010581.1 576054 576551 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(576054..576551) Beijerinckia indica subsp. indica ATCC 9039 6199796 YP_001831663.1 CDS Bind_0522 NC_010581.1 576625 577656 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cak:Caul_2660 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(576625..577656) Beijerinckia indica subsp. indica ATCC 9039 6199614 YP_001831664.1 CDS Bind_0523 NC_010581.1 577693 578916 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppu:PP_3226 acyl-CoA dehydrogenase-related protein; acyl-CoA dehydrogenase type 2 complement(577693..578916) Beijerinckia indica subsp. indica ATCC 9039 6199466 YP_001831665.1 CDS Bind_0524 NC_010581.1 578922 579947 R KEGG: pfl:PFL_1382 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family, putative; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein complement(578922..579947) Beijerinckia indica subsp. indica ATCC 9039 6199330 YP_001831666.1 CDS Bind_0525 NC_010581.1 580129 581079 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0795 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 580129..581079 Beijerinckia indica subsp. indica ATCC 9039 6199449 YP_001831667.1 CDS Bind_0526 NC_010581.1 581203 582177 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3674 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein complement(581203..582177) Beijerinckia indica subsp. indica ATCC 9039 6198484 YP_001831668.1 CDS Bind_0527 NC_010581.1 582308 582775 R TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_1617 protein TolR; protein TolR complement(582308..582775) Beijerinckia indica subsp. indica ATCC 9039 6198603 YP_001831669.1 CDS Bind_0528 NC_010581.1 582756 583496 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: mag:amb3214 biopolymer transport protein; MotA/TolQ/ExbB proton channel complement(582756..583496) Beijerinckia indica subsp. indica ATCC 9039 6198648 YP_001831670.1 CDS Bind_0529 NC_010581.1 583637 584464 R TIGRFAM: TonB family protein; KEGG: pfo:Pfl_3737 TonB-like; TonB family protein complement(583637..584464) Beijerinckia indica subsp. indica ATCC 9039 6199386 YP_001831671.1 CDS Bind_0530 NC_010581.1 584869 585375 R PFAM: protein of unknown function DUF55; KEGG: ret:RHE_CH00838 hypothetical protein; hypothetical protein complement(584869..585375) Beijerinckia indica subsp. indica ATCC 9039 6199387 YP_001831672.1 CDS Bind_0531 NC_010581.1 585372 585746 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00839 putative glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(585372..585746) Beijerinckia indica subsp. indica ATCC 9039 6198909 YP_001831673.1 CDS Bind_0532 NC_010581.1 585823 586518 R PFAM: Helix-turn-helix type 11 domain protein; KEGG: bpt:Bpet1599 hypothetical protein; helix-turn-helix type 11 domain-containing protein complement(585823..586518) Beijerinckia indica subsp. indica ATCC 9039 6200597 YP_001831674.1 CDS Bind_0533 NC_010581.1 586654 587631 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pla:Plav_2215 methyltransferase type 11; type 12 methyltransferase 586654..587631 Beijerinckia indica subsp. indica ATCC 9039 6199447 YP_001831675.1 CDS Bind_0534 NC_010581.1 587897 588427 R KEGG: vpa:VP2004 hypothetical protein; hypothetical protein complement(587897..588427) Beijerinckia indica subsp. indica ATCC 9039 6200678 YP_001831676.1 CDS Bind_0535 NC_010581.1 588664 589626 R KEGG: zmo:ZMO0094 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(588664..589626) Beijerinckia indica subsp. indica ATCC 9039 6200045 YP_001831677.1 CDS Bind_0536 NC_010581.1 589747 591117 R PFAM: Malonyl-CoA decarboxylase; KEGG: bja:blr6729 putative decarboxylase; malonyl-CoA decarboxylase complement(589747..591117) Beijerinckia indica subsp. indica ATCC 9039 6200046 YP_001831678.1 CDS Bind_0537 NC_010581.1 591531 592310 D PFAM: Integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC; integral membrane protein TerC 591531..592310 Beijerinckia indica subsp. indica ATCC 9039 6200592 YP_001831679.1 CDS Bind_0538 NC_010581.1 592380 594590 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 592380..594590 Beijerinckia indica subsp. indica ATCC 9039 6200047 YP_001831680.1 CDS Bind_0539 NC_010581.1 594649 594969 D PFAM: ferredoxin; KEGG: mlo:msl0793 ferredoxin; ferredoxin 594649..594969 Beijerinckia indica subsp. indica ATCC 9039 6199456 YP_001831681.1 CDS Bind_0540 NC_010581.1 595121 596215 R PFAM: CBS domain containing protein; peptidase M50; KEGG: mes:Meso_2201 peptidase M50; peptidase M50 complement(595121..596215) Beijerinckia indica subsp. indica ATCC 9039 6200189 YP_001831682.1 CDS Bind_0541 NC_010581.1 596524 598029 R PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq; carboxypeptidase Taq complement(596524..598029) Beijerinckia indica subsp. indica ATCC 9039 6198550 YP_001831683.1 CDS Bind_0542 NC_010581.1 598222 599445 D PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4457 protein of unknown function DUF949; hypothetical protein 598222..599445 Beijerinckia indica subsp. indica ATCC 9039 6200522 YP_001831684.1 CDS Bind_0543 NC_010581.1 599535 601517 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(599535..601517) Beijerinckia indica subsp. indica ATCC 9039 6198481 YP_001831685.1 CDS Bind_0544 NC_010581.1 601761 602882 D PFAM: monooxygenase FAD-binding; KEGG: atc:AGR_L_226 hypothetical protein; hypothetical protein 601761..602882 Beijerinckia indica subsp. indica ATCC 9039 6199068 YP_001831686.1 CDS Bind_0545 NC_010581.1 602894 603457 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ava:Ava_4090 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(602894..603457) Beijerinckia indica subsp. indica ATCC 9039 6198895 YP_001831687.1 CDS Bind_0546 NC_010581.1 603905 604819 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3480 putative transcriptional regulator LysR; LysR family transcriptional regulator 603905..604819 Beijerinckia indica subsp. indica ATCC 9039 6199128 YP_001831688.1 CDS Bind_0547 NC_010581.1 604867 605190 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_4871 putative ferrodoxin; 4Fe-4S ferredoxin complement(604867..605190) Beijerinckia indica subsp. indica ATCC 9039 6198737 YP_001831689.1 CDS Bind_0548 NC_010581.1 605204 606814 R PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_4872 putative fumarate/succinate reductase flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(605204..606814) Beijerinckia indica subsp. indica ATCC 9039 6200270 YP_001831690.1 CDS Bind_0549 NC_010581.1 606875 609373 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_1708 TonB-dependent receptor; TonB-dependent receptor complement(606875..609373) Beijerinckia indica subsp. indica ATCC 9039 6200194 YP_001831691.1 CDS Bind_0550 NC_010581.1 609757 610587 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_0748 ABC transporter related; ABC transporter-like protein complement(609757..610587) Beijerinckia indica subsp. indica ATCC 9039 6199448 YP_001831692.1 CDS Bind_0551 NC_010581.1 610584 611384 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3168 sulfate ester transporter permease component; binding-protein-dependent transport system inner membrane protein complement(610584..611384) Beijerinckia indica subsp. indica ATCC 9039 6199378 YP_001831693.1 CDS Bind_0552 NC_010581.1 611381 612241 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3169 sulfate ester transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(611381..612241) Beijerinckia indica subsp. indica ATCC 9039 6199516 YP_001831694.1 CDS Bind_0553 NC_010581.1 612355 613464 R KEGG: azc:AZC_3170 sulfate ester transport system substrate-binding protein; sulfate ester transport system substrate-binding protein complement(612355..613464) Beijerinckia indica subsp. indica ATCC 9039 6201850 YP_001831695.1 CDS Bind_0554 NC_010581.1 613604 614542 R PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ppg:PputGB1_0233 taurine dioxygenase; taurine dioxygenase complement(613604..614542) Beijerinckia indica subsp. indica ATCC 9039 6200593 YP_001831696.1 CDS Bind_0555 NC_010581.1 614747 616207 R PFAM: sulfatase; KEGG: nar:Saro_0474 sulfatase; sulfatase complement(614747..616207) Beijerinckia indica subsp. indica ATCC 9039 6198516 YP_001831697.1 CDS Bind_0556 NC_010581.1 616467 617711 D PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0358 major facilitator superfamily MFS_1; major facilitator transporter 616467..617711 Beijerinckia indica subsp. indica ATCC 9039 6200268 YP_001831698.1 CDS Bind_0557 NC_010581.1 617776 618432 R KEGG: xau:Xaut_1107 hypothetical protein; hypothetical protein complement(617776..618432) Beijerinckia indica subsp. indica ATCC 9039 6199514 YP_001831699.1 CDS Bind_0558 NC_010581.1 618436 619086 R PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2924 protein of unknown function DUF162; hypothetical protein complement(618436..619086) Beijerinckia indica subsp. indica ATCC 9039 6200259 YP_001831700.1 CDS Bind_0559 NC_010581.1 619083 620549 R PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2925 iron-sulfur cluster binding protein; hypothetical protein complement(619083..620549) Beijerinckia indica subsp. indica ATCC 9039 6200095 YP_001831701.1 CDS Bind_0560 NC_010581.1 620555 621352 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pde:Pden_2926 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(620555..621352) Beijerinckia indica subsp. indica ATCC 9039 6199176 YP_001831702.1 CDS Bind_0561 NC_010581.1 621551 623233 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: azc:AZC_4251 L-lactate transport precursor; L-lactate transport complement(621551..623233) Beijerinckia indica subsp. indica ATCC 9039 6199148 YP_001831703.1 CDS Bind_0562 NC_010581.1 623400 624050 R TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase; maleylacetoacetate isomerase complement(623400..624050) Beijerinckia indica subsp. indica ATCC 9039 6199394 YP_001831704.1 CDS Bind_0563 NC_010581.1 624126 624563 D PFAM: protein of unknown function UPF0066; KEGG: xau:Xaut_4390 protein of unknown function UPF0066; hypothetical protein 624126..624563 Beijerinckia indica subsp. indica ATCC 9039 6199325 YP_001831705.1 CDS Bind_0564 NC_010581.1 624679 626064 R PFAM: Citrate transporter; KEGG: rso:RSc2518 hypothetical protein; citrate transporter complement(624679..626064) Beijerinckia indica subsp. indica ATCC 9039 6200260 YP_001831706.1 CDS Bind_0565 NC_010581.1 626696 628234 D KEGG: rpe:RPE_0360 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 626696..628234 Beijerinckia indica subsp. indica ATCC 9039 6198702 YP_001831707.1 CDS Bind_0566 NC_010581.1 628327 629898 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_5661 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 628327..629898 Beijerinckia indica subsp. indica ATCC 9039 6198700 YP_001831708.1 CDS Bind_0567 NC_010581.1 629939 631519 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: rpc:RPC_0415 RNA polymerase factor sigma-54; RNA polymerase sigma-54 subunit RpoN complement(629939..631519) Beijerinckia indica subsp. indica ATCC 9039 6199155 YP_001831709.1 CDS Bind_0568 NC_010581.1 632053 632988 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3926 putative ABC transporter ATP-binding protein in NtrA/RpoN 5'region; ABC transporter-like protein complement(632053..632988) Beijerinckia indica subsp. indica ATCC 9039 6199476 YP_001831710.1 CDS Bind_0569 NC_010581.1 632985 633218 R hypothetical protein complement(632985..633218) Beijerinckia indica subsp. indica ATCC 9039 6198480 YP_001831711.1 CDS Bind_0570 NC_010581.1 633384 634022 R PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein; OstA family protein complement(633384..634022) Beijerinckia indica subsp. indica ATCC 9039 6199373 YP_001831712.1 CDS Bind_0571 NC_010581.1 634019 634744 R PFAM: protein of unknown function DUF1239; KEGG: bbt:BBta_0124 hypothetical protein; hypothetical protein complement(634019..634744) Beijerinckia indica subsp. indica ATCC 9039 6199454 YP_001831713.1 CDS Bind_0572 NC_010581.1 634832 635446 R PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease; 3'-5' exonuclease complement(634832..635446) Beijerinckia indica subsp. indica ATCC 9039 6200675 YP_001831714.1 CDS Bind_0573 NC_010581.1 635767 636999 D KEGG: azc:AZC_0229 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 635767..636999 Beijerinckia indica subsp. indica ATCC 9039 6198614 YP_001831715.1 CDS Bind_0574 NC_010581.1 637002 637649 D TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; methionine biosynthesis protein MetW 637002..637649 Beijerinckia indica subsp. indica ATCC 9039 6198438 YP_001831716.1 CDS Bind_0575 NC_010581.1 637724 639091 D PFAM: amino acid permease-associated region; KEGG: rso:RS02383 probable amino acid transporter transmembrane protein; amino acid permease-associated protein 637724..639091 Beijerinckia indica subsp. indica ATCC 9039 6200269 YP_001831717.1 CDS Bind_0576 NC_010581.1 639099 640721 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_0622 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(639099..640721) Beijerinckia indica subsp. indica ATCC 9039 6199179 YP_001831718.1 CDS Bind_0577 NC_010581.1 640923 641837 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_2363 transcriptional regulator, LysR family; LysR family transcriptional regulator 640923..641837 Beijerinckia indica subsp. indica ATCC 9039 6199512 YP_001831719.1 CDS Bind_0578 NC_010581.1 641957 642835 D PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0756 beta-lactamase domain protein; beta-lactamase domain-containing protein 641957..642835 Beijerinckia indica subsp. indica ATCC 9039 6199479 YP_001831720.1 CDS Bind_0579 NC_010581.1 642844 643758 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3780 putative LysR family transcriptional regulator; LysR family transcriptional regulator complement(642844..643758) Beijerinckia indica subsp. indica ATCC 9039 6198483 YP_001831721.1 CDS Bind_0580 NC_010581.1 643870 644637 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR 643870..644637 Beijerinckia indica subsp. indica ATCC 9039 6200097 YP_001831722.1 CDS Bind_0581 NC_010581.1 644655 645548 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rle:RL3778 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 644655..645548 Beijerinckia indica subsp. indica ATCC 9039 6198554 YP_001831723.1 CDS Bind_0582 NC_010581.1 645606 647222 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bmu:Bmul_4948 Na+/H+ antiporter; Na+/H+ antiporter complement(645606..647222) Beijerinckia indica subsp. indica ATCC 9039 6198555 YP_001831724.1 CDS Bind_0583 NC_010581.1 647390 647923 R PFAM: Inorganic pyrophosphatase; KEGG: xau:Xaut_2496 inorganic diphosphatase; inorganic diphosphatase complement(647390..647923) Beijerinckia indica subsp. indica ATCC 9039 6198740 YP_001831725.1 CDS Bind_0584 NC_010581.1 648109 648633 R PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0410 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(648109..648633) Beijerinckia indica subsp. indica ATCC 9039 6200521 YP_001831726.1 CDS Bind_0585 NC_010581.1 648895 650271 R KEGG: mex:Mext_2339 hypothetical protein; hypothetical protein complement(648895..650271) Beijerinckia indica subsp. indica ATCC 9039 6199392 YP_001831727.1 CDS Bind_0586 NC_010581.1 650306 651058 R PFAM: Nucleotidyl transferase; KEGG: rpc:RPC_0385 nucleotidyl transferase; nucleotidyl transferase complement(650306..651058) Beijerinckia indica subsp. indica ATCC 9039 6201283 YP_001831728.1 CDS Bind_0587 NC_010581.1 651165 652853 R PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: mex:Mext_4431 protein of unknown function UPF0079; hypothetical protein complement(651165..652853) Beijerinckia indica subsp. indica ATCC 9039 6200043 YP_001831729.1 CDS Bind_0588 NC_010581.1 653445 656156 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4432 ATP-binding region ATPase domain protein; histidine kinase complement(653445..656156) Beijerinckia indica subsp. indica ATCC 9039 6199326 YP_001831730.1 CDS Bind_0589 NC_010581.1 656484 657893 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(656484..657893) Beijerinckia indica subsp. indica ATCC 9039 6198899 YP_001831731.1 CDS Bind_0590 NC_010581.1 657967 659211 R PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A0734 glycosyltransferase-like protein; group 1 glycosyl transferase complement(657967..659211) Beijerinckia indica subsp. indica ATCC 9039 6200016 YP_001831732.1 CDS Bind_0591 NC_010581.1 659588 660784 R PFAM: glycosyl transferase family 2; KEGG: gvi:gll1794 probable glycosyltransferase; glycosyl transferase family protein complement(659588..660784) Beijerinckia indica subsp. indica ATCC 9039 6199150 YP_001831733.1 CDS Bind_0592 NC_010581.1 661447 662301 D KEGG: ana:alr0587 unknown protein; hypothetical protein 661447..662301 Beijerinckia indica subsp. indica ATCC 9039 6200676 YP_001831734.1 CDS Bind_0593 NC_010581.1 662465 663625 D KEGG: mag:amb3714 predicted permease; permease-like protein 662465..663625 Beijerinckia indica subsp. indica ATCC 9039 6200195 YP_001831735.1 CDS Bind_0594 NC_010581.1 663770 664552 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmt:PMT0108 ABC transporter, ATP binding protein; ABC transporter-like protein complement(663770..664552) Beijerinckia indica subsp. indica ATCC 9039 6199320 YP_001831736.1 CDS Bind_0595 NC_010581.1 664542 665345 R PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A3799 ABC O-antigen/lipopolysaccharide exporter, inner membrane subunit; ABC-2 type transporter complement(664542..665345) Beijerinckia indica subsp. indica ATCC 9039 6201215 YP_001831737.1 CDS Bind_0596 NC_010581.1 665986 667584 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: azc:AZC_3545 2-isopropylmalate synthase; 2-isopropylmalate synthase 665986..667584 Beijerinckia indica subsp. indica ATCC 9039 6200303 YP_001831738.1 CDS Bind_0598 NC_010581.1 669431 669634 D KEGG: xau:Xaut_4348 hypothetical protein; hypothetical protein 669431..669634 Beijerinckia indica subsp. indica ATCC 9039 6201852 YP_001831739.1 CDS Bind_0599 NC_010581.1 669780 669995 R hypothetical protein complement(669780..669995) Beijerinckia indica subsp. indica ATCC 9039 6198528 YP_001831740.1 CDS Bind_0600 NC_010581.1 670223 670615 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sus:Acid_1340 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(670223..670615) Beijerinckia indica subsp. indica ATCC 9039 6200245 YP_001831741.1 CDS Bind_0601 NC_010581.1 670972 671478 D KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein 670972..671478 Beijerinckia indica subsp. indica ATCC 9039 6199125 YP_001831742.1 CDS Bind_0602 NC_010581.1 671530 671781 R KEGG: bja:bll7386 hypothetical protein; hypothetical protein complement(671530..671781) Beijerinckia indica subsp. indica ATCC 9039 6200196 YP_001831743.1 CDS Bind_0603 NC_010581.1 671892 672338 R KEGG: gox:GOX1434 hypothetical protein; hypothetical protein complement(671892..672338) Beijerinckia indica subsp. indica ATCC 9039 6201213 YP_001831744.1 CDS Bind_0604 NC_010581.1 672567 678041 D PFAM: alpha-2-macroglobulin domain protein; N/apple PAN domain protein; alpha-2-macroglobulin domain protein 2; KEGG: sme:SMb21298 conserved hypothetical protein, possibly exported; alpha-2-macroglobulin domain-containing protein 672567..678041 Beijerinckia indica subsp. indica ATCC 9039 6201214 YP_001831745.1 CDS Bind_0605 NC_010581.1 678038 680113 D TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: rle:pRL110012 putative penicillin-binding family protein; penicillin-binding protein 1C 678038..680113 Beijerinckia indica subsp. indica ATCC 9039 6200529 YP_001831746.1 CDS Bind_0607 NC_010581.1 687310 688011 R PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; integrase catalytic subunit complement(687310..688011) Beijerinckia indica subsp. indica ATCC 9039 6199321 YP_001831747.1 CDS Bind_0608 NC_010581.1 688091 689008 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mes:Meso_3689 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(688091..689008) Beijerinckia indica subsp. indica ATCC 9039 6198822 YP_001831748.1 CDS Bind_0609 NC_010581.1 689591 690037 D KEGG: rle:RL3207 hypothetical protein; hypothetical protein 689591..690037 Beijerinckia indica subsp. indica ATCC 9039 6199232 YP_001831749.1 CDS Bind_0610 NC_010581.1 690127 690486 D hypothetical protein 690127..690486 Beijerinckia indica subsp. indica ATCC 9039 6198741 YP_001831750.1 CDS Bind_0611 NC_010581.1 690683 691354 D KEGG: mlo:mll4938 hypothetical protein; hypothetical protein 690683..691354 Beijerinckia indica subsp. indica ATCC 9039 6201441 YP_001831751.1 CDS Bind_0612 NC_010581.1 691422 692105 D PFAM: carbonic anhydrase; KEGG: gdi:GDI2188 carbonic anhydrase 1; carbonate dehydratase 691422..692105 Beijerinckia indica subsp. indica ATCC 9039 6199477 YP_001831752.1 CDS Bind_0613 NC_010581.1 692186 694117 R PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_1499 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(692186..694117) Beijerinckia indica subsp. indica ATCC 9039 6198867 YP_001831753.1 CDS Bind_0614 NC_010581.1 694305 695093 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mag:amb0634 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase complement(694305..695093) Beijerinckia indica subsp. indica ATCC 9039 6199301 YP_001831754.1 CDS Bind_0615 NC_010581.1 695134 696021 R KEGG: rle:pRL110406 putative 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(695134..696021) Beijerinckia indica subsp. indica ATCC 9039 6198911 YP_001831755.1 CDS Bind_0616 NC_010581.1 696068 697102 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: atc:AGR_L_2647 probable enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(696068..697102) Beijerinckia indica subsp. indica ATCC 9039 6201442 YP_001831756.1 CDS Bind_0617 NC_010581.1 697127 698269 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2190 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein complement(697127..698269) Beijerinckia indica subsp. indica ATCC 9039 6199513 YP_001831757.1 CDS Bind_0618 NC_010581.1 698286 699785 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: azc:AZC_0575 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(698286..699785) Beijerinckia indica subsp. indica ATCC 9039 6201853 YP_001831758.1 CDS Bind_0619 NC_010581.1 699934 700839 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2194 transcriptional regulator, LysR family; LysR family transcriptional regulator 699934..700839 Beijerinckia indica subsp. indica ATCC 9039 6199354 YP_001831759.1 CDS Bind_0620 NC_010581.1 700952 701719 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3524 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(700952..701719) Beijerinckia indica subsp. indica ATCC 9039 6199518 YP_001831760.1 CDS Bind_0621 NC_010581.1 701745 702428 R KEGG: bmu:Bmul_6011 hypothetical protein; hypothetical protein complement(701745..702428) Beijerinckia indica subsp. indica ATCC 9039 6199519 YP_001831761.1 CDS Bind_0622 NC_010581.1 702502 703425 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI1197 D-2-hydroxyacid dehydrogensase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(702502..703425) Beijerinckia indica subsp. indica ATCC 9039 6199178 YP_001831762.1 CDS Bind_0623 NC_010581.1 703640 704401 R KEGG: gdi:GDI1198 putative 2-keto-4-pentenoate hydratase-like; putative 2-keto-4-pentenoate hydratase-like protein complement(703640..704401) Beijerinckia indica subsp. indica ATCC 9039 6200679 YP_001831763.1 CDS Bind_0624 NC_010581.1 704398 705444 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: csa:Csal_0272 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(704398..705444) Beijerinckia indica subsp. indica ATCC 9039 6200680 YP_001831764.1 CDS Bind_0625 NC_010581.1 705799 706299 D KEGG: gdi:GDI3115 shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase 705799..706299 Beijerinckia indica subsp. indica ATCC 9039 6199149 YP_001831765.1 CDS Bind_0626 NC_010581.1 706949 707953 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI1200 oxidoreductase protein; oxidoreductase domain-containing protein 706949..707953 Beijerinckia indica subsp. indica ATCC 9039 6199303 YP_001831766.1 CDS Bind_0627 NC_010581.1 707950 709386 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecc:c5022 putative transmembrane transport protein; major facilitator transporter 707950..709386 Beijerinckia indica subsp. indica ATCC 9039 6200258 YP_001831767.1 CDS Bind_0628 NC_010581.1 709626 711215 D PFAM: porin; KEGG: mex:Mext_3186 porin; porin 709626..711215 Beijerinckia indica subsp. indica ATCC 9039 6200018 YP_001831768.1 CDS Bind_0629 NC_010581.1 711247 711903 D KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 711247..711903 Beijerinckia indica subsp. indica ATCC 9039 6199480 YP_001831769.1 CDS Bind_0630 NC_010581.1 711960 713393 D KEGG: reh:H16_A3602 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 711960..713393 Beijerinckia indica subsp. indica ATCC 9039 6198724 YP_001831770.1 CDS Bind_0631 NC_010581.1 713653 714267 D hypothetical protein 713653..714267 Beijerinckia indica subsp. indica ATCC 9039 6199374 YP_001831771.1 CDS Bind_0632 NC_010581.1 714310 714669 D KEGG: xfa:XF1673 hypothetical protein; hypothetical protein 714310..714669 Beijerinckia indica subsp. indica ATCC 9039 6199799 YP_001831772.1 CDS Bind_0633 NC_010581.1 714666 716195 D PFAM: protein of unknown function DUF264; KEGG: bvi:Bcep1808_1170 protein of unknown function DUF264; hypothetical protein 714666..716195 Beijerinckia indica subsp. indica ATCC 9039 6198902 YP_001831773.1 CDS Bind_0634 NC_010581.1 716295 717659 D KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein; putative phage associated protein 716295..717659 Beijerinckia indica subsp. indica ATCC 9039 6198732 YP_001831774.1 CDS Bind_0635 NC_010581.1 717723 719054 D KEGG: ngo:NGO0497 hypothetical protein, putative phage associated protein; hypothetical protein 717723..719054 Beijerinckia indica subsp. indica ATCC 9039 6199327 YP_001831775.1 CDS Bind_0636 NC_010581.1 719156 720670 D KEGG: ngo:NGO0498 hypothetical protein, putative phage associated protein; putative phage associated protein 719156..720670 Beijerinckia indica subsp. indica ATCC 9039 6199377 YP_001831776.1 CDS Bind_0637 NC_010581.1 720697 721047 D hypothetical protein 720697..721047 Beijerinckia indica subsp. indica ATCC 9039 6201282 YP_001831777.1 CDS Bind_0638 NC_010581.1 721057 721884 D KEGG: mag:amb1781 hypothetical protein; hypothetical protein 721057..721884 Beijerinckia indica subsp. indica ATCC 9039 6199450 YP_001831778.1 CDS Bind_0639 NC_010581.1 721878 722303 D hypothetical protein 721878..722303 Beijerinckia indica subsp. indica ATCC 9039 6199129 YP_001831779.1 CDS Bind_0640 NC_010581.1 722300 722734 D KEGG: aci:ACIAD2161 hypothetical protein; hypothetical protein 722300..722734 Beijerinckia indica subsp. indica ATCC 9039 6199370 YP_001831780.1 CDS Bind_0641 NC_010581.1 722843 723586 D KEGG: aci:ACIAD2160 hypothetical protein; hypothetical protein 722843..723586 Beijerinckia indica subsp. indica ATCC 9039 6199612 YP_001831781.1 CDS Bind_0642 NC_010581.1 723588 723926 D hypothetical protein 723588..723926 Beijerinckia indica subsp. indica ATCC 9039 6198637 YP_001831782.1 CDS Bind_0643 NC_010581.1 724210 725559 D KEGG: aci:ACIAD2156 hypothetical protein; putative phage tail tape meausure protein; hypothetical protein 724210..725559 Beijerinckia indica subsp. indica ATCC 9039 6199107 YP_001831783.1 CDS Bind_0644 NC_010581.1 725568 726149 R KEGG: aba:Acid345_4695 nuclease-related protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein complement(725568..726149) Beijerinckia indica subsp. indica ATCC 9039 6200744 YP_001831784.1 CDS Bind_0645 NC_010581.1 726475 726759 R hypothetical protein complement(726475..726759) Beijerinckia indica subsp. indica ATCC 9039 6201067 YP_001831785.1 CDS Bind_0646 NC_010581.1 726915 727466 D KEGG: azo:azo2957 hypothetical protein; hypothetical protein 726915..727466 Beijerinckia indica subsp. indica ATCC 9039 6198636 YP_001831786.1 CDS Bind_0647 NC_010581.1 727636 728172 R PFAM: Chromate transporter; KEGG: ana:all1110 chromate transport protein; chromate transporter complement(727636..728172) Beijerinckia indica subsp. indica ATCC 9039 6199121 YP_001831787.1 CDS Bind_0648 NC_010581.1 728169 728765 R PFAM: Chromate transporter; KEGG: ccr:CC_1097 chromate transporter, putative; chromate transporter complement(728169..728765) Beijerinckia indica subsp. indica ATCC 9039 6201796 YP_001831788.1 CDS Bind_0649 NC_010581.1 728865 729335 R PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC complement(728865..729335) Beijerinckia indica subsp. indica ATCC 9039 6200666 YP_001831789.1 CDS Bind_0650 NC_010581.1 729346 730974 R PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bja:blr4108 leucyl aminopeptidase; leucyl aminopeptidase complement(729346..730974) Beijerinckia indica subsp. indica ATCC 9039 6201176 YP_001831790.1 CDS Bind_0651 NC_010581.1 731720 732808 D PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 731720..732808 Beijerinckia indica subsp. indica ATCC 9039 6201092 YP_001831791.1 CDS Bind_0652 NC_010581.1 732808 735486 D PFAM: Organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein; organic solvent tolerance protein 732808..735486 Beijerinckia indica subsp. indica ATCC 9039 6199408 YP_001831792.1 CDS Bind_0653 NC_010581.1 735658 736578 D KEGG: rpa:RPA3064 hypothetical protein; hypothetical protein 735658..736578 Beijerinckia indica subsp. indica ATCC 9039 6200793 YP_001831793.1 CDS Bind_0654 NC_010581.1 736755 737648 D TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: xau:Xaut_2833 dimethyladenosine transferase; dimethyladenosine transferase 736755..737648 Beijerinckia indica subsp. indica ATCC 9039 6200092 YP_001831794.1 CDS Bind_0655 NC_010581.1 737765 738868 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0340 NADPH dehydrogenase; NADH:flavin oxidoreductase 737765..738868 Beijerinckia indica subsp. indica ATCC 9039 6199915 YP_001831795.1 CDS Bind_0656 NC_010581.1 738947 739495 D PFAM: membrane protein of uknown function UCP014873; KEGG: mex:Mext_1191 membrane protein of uknown function UCP014873; hypothetical protein 738947..739495 Beijerinckia indica subsp. indica ATCC 9039 6200250 YP_001831796.1 CDS Bind_0657 NC_010581.1 739559 740269 D PFAM: MgtC/SapB transporter; KEGG: nha:Nham_0456 MgtC/SapB transporter; MgtC/SapB transporter 739559..740269 Beijerinckia indica subsp. indica ATCC 9039 6199921 YP_001831797.1 CDS Bind_0658 NC_010581.1 740293 741768 R TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(740293..741768) Beijerinckia indica subsp. indica ATCC 9039 6198663 YP_001831798.1 CDS Bind_0659 NC_010581.1 742065 742577 D KEGG: xau:Xaut_2732 putative exported protein of unknown function; hypothetical protein 742065..742577 Beijerinckia indica subsp. indica ATCC 9039 6198670 YP_001831799.1 CDS Bind_0660 NC_010581.1 742586 743302 D PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2; ribonuclease T2 742586..743302 Beijerinckia indica subsp. indica ATCC 9039 6201241 YP_001831800.1 CDS Bind_0661 NC_010581.1 743306 744151 D PFAM: protein of unknown function DUF519; KEGG: mlo:mlr7888 hypothetical protein; hypothetical protein 743306..744151 Beijerinckia indica subsp. indica ATCC 9039 6200110 YP_001831801.1 CDS Bind_0662 NC_010581.1 744514 744726 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rpd:RPD_1283 cold-shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 744514..744726 Beijerinckia indica subsp. indica ATCC 9039 6198809 YP_001831802.1 CDS Bind_0663 NC_010581.1 744723 745640 R KEGG: mex:Mext_0017 hypothetical protein; hypothetical protein complement(744723..745640) Beijerinckia indica subsp. indica ATCC 9039 6198435 YP_001831803.1 CDS Bind_0664 NC_010581.1 745698 746411 R hypothetical protein complement(745698..746411) Beijerinckia indica subsp. indica ATCC 9039 6198430 YP_001831804.1 CDS Bind_0665 NC_010581.1 746505 747593 D KEGG: rru:Rru_A0360 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor 746505..747593 Beijerinckia indica subsp. indica ATCC 9039 6199265 YP_001831805.1 CDS Bind_0666 NC_010581.1 747616 748068 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like); protein tyrosine phosphatase complement(747616..748068) Beijerinckia indica subsp. indica ATCC 9039 6201606 YP_001831806.1 CDS Bind_0667 NC_010581.1 748174 748662 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein; hypothetical protein complement(748174..748662) Beijerinckia indica subsp. indica ATCC 9039 6198523 YP_001831807.1 CDS Bind_0668 NC_010581.1 748646 749983 R PFAM: histidinol dehydrogenase; KEGG: rpb:RPB_4350 histidinol dehydrogenase; histidinol dehydrogenase complement(748646..749983) Beijerinckia indica subsp. indica ATCC 9039 6201470 YP_001831808.1 CDS Bind_0669 NC_010581.1 750364 750846 D KEGG: nwi:Nwi_2333 hypothetical protein; hypothetical protein 750364..750846 Beijerinckia indica subsp. indica ATCC 9039 6198969 YP_001831809.1 CDS Bind_0670 NC_010581.1 750981 751331 D KEGG: mex:Mext_2673 hypothetical protein; hypothetical protein 750981..751331 Beijerinckia indica subsp. indica ATCC 9039 6199023 YP_001831810.1 CDS Bind_0671 NC_010581.1 751322 752047 R PFAM: NUDIX hydrolase; KEGG: bbt:BBta_6065 hypothetical protein; NUDIX hydrolase complement(751322..752047) Beijerinckia indica subsp. indica ATCC 9039 6200267 YP_001831811.1 CDS Bind_0672 NC_010581.1 752208 754037 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_0473 ATPase; ABC transporter-like protein 752208..754037 Beijerinckia indica subsp. indica ATCC 9039 6199567 YP_001831812.1 CDS Bind_0673 NC_010581.1 754080 754952 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpt:Bpet3984 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(754080..754952) Beijerinckia indica subsp. indica ATCC 9039 6200943 YP_001831813.1 CDS Bind_0674 NC_010581.1 755044 756012 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpt:Bpet3983 quinone oxidoreductase; alcohol dehydrogenase 755044..756012 Beijerinckia indica subsp. indica ATCC 9039 6201314 YP_001831814.1 CDS Bind_0675 NC_010581.1 756190 757302 D KEGG: xau:Xaut_3460 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 756190..757302 Beijerinckia indica subsp. indica ATCC 9039 6201494 YP_001831815.1 CDS Bind_0676 NC_010581.1 757332 758171 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 757332..758171 Beijerinckia indica subsp. indica ATCC 9039 6201625 YP_001831816.1 CDS Bind_0677 NC_010581.1 758179 758967 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_3458 ABC transporter related; ABC transporter-like protein 758179..758967 Beijerinckia indica subsp. indica ATCC 9039 6201440 YP_001831817.1 CDS Bind_0678 NC_010581.1 758945 759091 D hypothetical protein 758945..759091 Beijerinckia indica subsp. indica ATCC 9039 6201204 YP_001831818.1 CDS Bind_0679 NC_010581.1 759149 759313 D hypothetical protein 759149..759313 Beijerinckia indica subsp. indica ATCC 9039 6201227 YP_001831819.1 CDS Bind_0680 NC_010581.1 759807 761993 D KEGG: bcs:BCAN_A1643 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 759807..761993 Beijerinckia indica subsp. indica ATCC 9039 6201566 YP_001831820.1 CDS Bind_0681 NC_010581.1 762175 762417 D hypothetical protein 762175..762417 Beijerinckia indica subsp. indica ATCC 9039 6201803 YP_001831821.1 CDS Bind_0682 NC_010581.1 762755 763444 D hypothetical protein 762755..763444 Beijerinckia indica subsp. indica ATCC 9039 6201172 YP_001831822.1 CDS Bind_0683 NC_010581.1 763829 764323 D PFAM: protein of unknown function UPF0040; KEGG: azc:AZC_4547 MraZ protein; hypothetical protein 763829..764323 Beijerinckia indica subsp. indica ATCC 9039 6201740 YP_001831823.1 CDS mraW NC_010581.1 764320 765387 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bja:bll6610 S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW 764320..765387 Beijerinckia indica subsp. indica ATCC 9039 6201760 YP_001831824.1 CDS Bind_0685 NC_010581.1 765388 765780 D KEGG: azc:AZC_4545 hypothetical protein; hypothetical protein 765388..765780 Beijerinckia indica subsp. indica ATCC 9039 6201276 YP_001831825.1 CDS Bind_0686 NC_010581.1 765790 767634 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 765790..767634 Beijerinckia indica subsp. indica ATCC 9039 6201789 YP_001831826.1 CDS Bind_0687 NC_010581.1 767634 769094 D TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpc:RPC_2189 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 767634..769094 Beijerinckia indica subsp. indica ATCC 9039 6201736 YP_001831827.1 CDS Bind_0688 NC_010581.1 769091 770551 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpd:RPD_3398 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 769091..770551 Beijerinckia indica subsp. indica ATCC 9039 6201752 YP_001831828.1 CDS mraY NC_010581.1 770690 771772 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 770690..771772 Beijerinckia indica subsp. indica ATCC 9039 6201774 YP_001831829.1 CDS murD NC_010581.1 771775 773163 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 771775..773163 Beijerinckia indica subsp. indica ATCC 9039 6201808 YP_001831830.1 CDS Bind_0691 NC_010581.1 773220 774362 D PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein; cell cycle protein 773220..774362 Beijerinckia indica subsp. indica ATCC 9039 6201830 YP_001831831.1 CDS Bind_0692 NC_010581.1 774359 775486 D KEGG: azc:AZC_4555 N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 774359..775486 Beijerinckia indica subsp. indica ATCC 9039 6201861 YP_001831832.1 CDS murC NC_010581.1 775483 776913 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 775483..776913 Beijerinckia indica subsp. indica ATCC 9039 6199725 YP_001831833.1 CDS Bind_0694 NC_010581.1 776915 777847 D KEGG: xau:Xaut_0324 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 776915..777847 Beijerinckia indica subsp. indica ATCC 9039 6198673 YP_001831834.1 CDS ddl NC_010581.1 777866 778789 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 777866..778789 Beijerinckia indica subsp. indica ATCC 9039 6198336 YP_001831835.1 CDS Bind_0696 NC_010581.1 778756 779739 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain protein FtsQ-type; polypeptide-transport-associated domain-containing protein 778756..779739 Beijerinckia indica subsp. indica ATCC 9039 6198384 YP_001831836.1 CDS Bind_0697 NC_010581.1 779746 781062 D PFAM: cell division protein FtsA; KEGG: mex:Mext_2948 cell division protein FtsA; cell division protein FtsA 779746..781062 Beijerinckia indica subsp. indica ATCC 9039 6198390 YP_001831837.1 CDS Bind_0698 NC_010581.1 781258 783090 D TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: xau:Xaut_0328 cell division protein FtsZ; cell division protein FtsZ 781258..783090 Beijerinckia indica subsp. indica ATCC 9039 6198394 YP_001831838.1 CDS Bind_0699 NC_010581.1 783553 784728 D KEGG: mex:Mext_2951 putative lipoprotein; DNA uptake lipoprotein-like protein 783553..784728 Beijerinckia indica subsp. indica ATCC 9039 6199369 YP_001831839.1 CDS Bind_0700 NC_010581.1 784849 786513 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bja:bll6593 DNA repair protein; DNA repair protein RecN 784849..786513 Beijerinckia indica subsp. indica ATCC 9039 6201431 YP_001831840.1 CDS Bind_0701 NC_010581.1 786907 787332 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2942 hypothetical protein; cupin 786907..787332 Beijerinckia indica subsp. indica ATCC 9039 6201673 YP_001831841.1 CDS Bind_0702 NC_010581.1 787405 788298 D PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_0555 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 787405..788298 Beijerinckia indica subsp. indica ATCC 9039 6201555 YP_001831842.1 CDS Bind_0703 NC_010581.1 788885 789226 D hypothetical protein 788885..789226 Beijerinckia indica subsp. indica ATCC 9039 6200751 YP_001831843.1 CDS Bind_0704 NC_010581.1 789387 789614 D hypothetical protein 789387..789614 Beijerinckia indica subsp. indica ATCC 9039 6200951 YP_001831844.1 CDS Bind_0705 NC_010581.1 790713 791476 D KEGG: bcs:BCAN_A0546 hypothetical protein; transposase join(790713..791039,791039..791476) Beijerinckia indica subsp. indica ATCC 9039 6200661 YP_001831845.1 CDS Bind_0706 NC_010581.1 791563 793662 D KEGG: xau:Xaut_1762 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase 791563..793662 Beijerinckia indica subsp. indica ATCC 9039 6200171 YP_001831846.1 CDS Bind_0707 NC_010581.1 794146 797718 D KEGG: rpa:RPA3316 possible chemotaxis CheB/CheR fusion protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; MCP methyltransferase/methylesterase 794146..797718 Beijerinckia indica subsp. indica ATCC 9039 6201056 YP_001831847.1 CDS Bind_0708 NC_010581.1 797715 798086 D SMART: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver; response regulator receiver protein 797715..798086 Beijerinckia indica subsp. indica ATCC 9039 6198638 YP_001831848.1 CDS Bind_0709 NC_010581.1 798091 798705 R TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpa:RPA0206 putative cytochrome c biogenesis protein, thiol:disulfide interchange protein; periplasmic protein thiol--disulfide oxidoreductase DsbE complement(798091..798705) Beijerinckia indica subsp. indica ATCC 9039 6199297 YP_001831849.1 CDS Bind_0710 NC_010581.1 798702 798872 R hypothetical protein complement(798702..798872) Beijerinckia indica subsp. indica ATCC 9039 6199225 YP_001831850.1 CDS Bind_0711 NC_010581.1 798872 799627 R TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rpe:RPE_0313 heme exporter protein CcmC; heme exporter protein CcmC complement(798872..799627) Beijerinckia indica subsp. indica ATCC 9039 6198569 YP_001831851.1 CDS Bind_0712 NC_010581.1 799839 800714 R TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpa:RPA1068 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ complement(799839..800714) Beijerinckia indica subsp. indica ATCC 9039 6200697 YP_001831852.1 CDS Bind_0713 NC_010581.1 800960 802282 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 800960..802282 Beijerinckia indica subsp. indica ATCC 9039 6199953 YP_001831853.1 CDS Bind_0714 NC_010581.1 802738 803037 D KEGG: bra:BRADO4333 hypothetical protein; hypothetical protein 802738..803037 Beijerinckia indica subsp. indica ATCC 9039 6201860 YP_001831854.1 CDS Bind_0715 NC_010581.1 803185 803829 R PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein; hypothetical protein complement(803185..803829) Beijerinckia indica subsp. indica ATCC 9039 6199211 YP_001831855.1 CDS Bind_0716 NC_010581.1 803846 804436 R PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase; NUDIX hydrolase complement(803846..804436) Beijerinckia indica subsp. indica ATCC 9039 6201835 YP_001831856.1 CDS Bind_0717 NC_010581.1 804433 805314 R KEGG: azc:AZC_0487 hypothetical protein; hypothetical protein complement(804433..805314) Beijerinckia indica subsp. indica ATCC 9039 6200335 YP_001831857.1 CDS Bind_0718 NC_010581.1 805456 806073 D PFAM: protein of unknown function DUF179; KEGG: rpe:RPE_0714 protein of unknown function DUF179; hypothetical protein 805456..806073 Beijerinckia indica subsp. indica ATCC 9039 6199954 YP_001831858.1 CDS Bind_0719 NC_010581.1 806138 808990 R KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(806138..808990) Beijerinckia indica subsp. indica ATCC 9039 6200734 YP_001831859.1 CDS Bind_0720 NC_010581.1 809335 809943 R PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_0597 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(809335..809943) Beijerinckia indica subsp. indica ATCC 9039 6199478 YP_001831860.1 CDS Bind_0721 NC_010581.1 810188 811453 R PFAM: peptidase M16 domain protein; KEGG: azc:AZC_2240 mitochondrial processing peptidase-like protein; peptidase M16 domain-containing protein complement(810188..811453) Beijerinckia indica subsp. indica ATCC 9039 6198549 YP_001831861.1 CDS Bind_0722 NC_010581.1 811546 812961 R KEGG: xau:Xaut_3524 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase complement(811546..812961) Beijerinckia indica subsp. indica ATCC 9039 6200074 YP_001831862.1 CDS Bind_0723 NC_010581.1 813181 813924 R PFAM: Surfeit locus 1 family protein; KEGG: azc:AZC_2953 putative surfeit locus protein; surfeit locus 1 family protein complement(813181..813924) Beijerinckia indica subsp. indica ATCC 9039 6201833 YP_001831863.1 CDS Bind_0724 NC_010581.1 813945 814328 R PFAM: protein of unknown function DUF983; KEGG: rle:RL1028 putative transmembrane protein; hypothetical protein complement(813945..814328) Beijerinckia indica subsp. indica ATCC 9039 6199791 YP_001831864.1 CDS Bind_0725 NC_010581.1 814423 815286 R PFAM: cytochrome c oxidase subunit III; KEGG: rpd:RPD_0819 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(814423..815286) Beijerinckia indica subsp. indica ATCC 9039 6201798 YP_001831865.1 CDS Bind_0726 NC_010581.1 815660 816286 R PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bra:BRADO6703 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 complement(815660..816286) Beijerinckia indica subsp. indica ATCC 9039 6198672 YP_001831866.1 CDS Bind_0727 NC_010581.1 816288 816455 R KEGG: xau:Xaut_4645 conserved protein CoxF; protein CoxF complement(816288..816455) Beijerinckia indica subsp. indica ATCC 9039 6198470 YP_001831867.1 CDS Bind_0728 NC_010581.1 816474 817439 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(816474..817439) Beijerinckia indica subsp. indica ATCC 9039 6198507 YP_001831868.1 CDS Bind_0729 NC_010581.1 817699 819366 R KEGG: oan:Oant_0582 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I complement(817699..819366) Beijerinckia indica subsp. indica ATCC 9039 6201832 YP_001831869.1 CDS Bind_0730 NC_010581.1 819527 820414 R KEGG: azc:AZC_2960 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II complement(819527..820414) Beijerinckia indica subsp. indica ATCC 9039 6199085 YP_001831870.1 CDS Bind_0731 NC_010581.1 820948 821589 D PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein; invasion associated locus B family protein 820948..821589 Beijerinckia indica subsp. indica ATCC 9039 6199413 YP_001831871.1 CDS Bind_0732 NC_010581.1 821771 822469 D KEGG: azc:AZC_4244 hypothetical protein; hypothetical protein 821771..822469 Beijerinckia indica subsp. indica ATCC 9039 6198951 YP_001831872.1 CDS Bind_0733 NC_010581.1 822915 824069 D TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: azc:AZC_4245 glycine cleavage system T protein; glycine cleavage system T protein 822915..824069 Beijerinckia indica subsp. indica ATCC 9039 6199217 YP_001831873.1 CDS Bind_0734 NC_010581.1 824069 824443 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 824069..824443 Beijerinckia indica subsp. indica ATCC 9039 6198582 YP_001831874.1 CDS Bind_0735 NC_010581.1 824480 825823 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 824480..825823 Beijerinckia indica subsp. indica ATCC 9039 6199453 YP_001831875.1 CDS Bind_0736 NC_010581.1 825868 827424 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 825868..827424 Beijerinckia indica subsp. indica ATCC 9039 6198826 YP_001831876.1 CDS Bind_0737 NC_010581.1 827470 828834 R KEGG: psa:PST_1093 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(827470..828834) Beijerinckia indica subsp. indica ATCC 9039 6201490 YP_001831877.1 CDS Bind_0738 NC_010581.1 828934 829098 R KEGG: bja:bsr7045 hypothetical protein; hypothetical protein complement(828934..829098) Beijerinckia indica subsp. indica ATCC 9039 6200689 YP_001831878.1 CDS Bind_0739 NC_010581.1 829339 829890 R KEGG: azc:AZC_0893 hypothetical protein; hypothetical protein complement(829339..829890) Beijerinckia indica subsp. indica ATCC 9039 6198172 YP_001831879.1 CDS Bind_0740 NC_010581.1 830146 830631 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: xau:Xaut_1976 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(830146..830631) Beijerinckia indica subsp. indica ATCC 9039 6201434 YP_001831880.1 CDS Bind_0741 NC_010581.1 830713 831276 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(830713..831276) Beijerinckia indica subsp. indica ATCC 9039 6201842 YP_001831881.1 CDS Bind_0742 NC_010581.1 831399 831629 R PFAM: H+transporting two-sector ATPase C subunit; KEGG: xau:Xaut_1978 H+transporting two-sector ATPase C subunit; H+transporting two-sector ATPase subunit C complement(831399..831629) Beijerinckia indica subsp. indica ATCC 9039 6198593 YP_001831882.1 CDS Bind_0743 NC_010581.1 831686 832447 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(831686..832447) Beijerinckia indica subsp. indica ATCC 9039 6201107 YP_001831883.1 CDS Bind_0744 NC_010581.1 832637 833008 R KEGG: mag:amb3992 ATP synthase protein I; hypothetical protein complement(832637..833008) Beijerinckia indica subsp. indica ATCC 9039 6200244 YP_001831884.1 CDS Bind_0745 NC_010581.1 833212 836664 R TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: xau:Xaut_1981 chromosome segregation protein SMC; chromosome segregation protein SMC complement(833212..836664) Beijerinckia indica subsp. indica ATCC 9039 6198556 YP_001831885.1 CDS Bind_0746 NC_010581.1 836760 837437 R PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3177 DsbA oxidoreductase; DSBA oxidoreductase complement(836760..837437) Beijerinckia indica subsp. indica ATCC 9039 6199428 YP_001831886.1 CDS Bind_0747 NC_010581.1 837939 838454 R PFAM: protein of unknown function DUF1159; KEGG: azc:AZC_0457 hypothetical protein; hypothetical protein complement(837939..838454) Beijerinckia indica subsp. indica ATCC 9039 6201447 YP_001831887.1 CDS Bind_0748 NC_010581.1 838732 839883 D KEGG: azc:AZC_0456 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase 838732..839883 Beijerinckia indica subsp. indica ATCC 9039 6199695 YP_001831888.1 CDS Bind_0749 NC_010581.1 839844 840113 D hypothetical protein 839844..840113 Beijerinckia indica subsp. indica ATCC 9039 6198865 YP_001831889.1 CDS Bind_0750 NC_010581.1 840376 841563 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(840376..841563) Beijerinckia indica subsp. indica ATCC 9039 6199926 YP_001831890.1 CDS Bind_0751 NC_010581.1 841927 843315 D KEGG: azc:AZC_2332 DAHP synthetase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 841927..843315 Beijerinckia indica subsp. indica ATCC 9039 6200713 YP_001831891.1 CDS Bind_0752 NC_010581.1 843402 844190 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_6127 putative extradiol ring-cleavage dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 843402..844190 Beijerinckia indica subsp. indica ATCC 9039 6199229 YP_001831892.1 CDS Bind_0753 NC_010581.1 844546 846219 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 844546..846219 Beijerinckia indica subsp. indica ATCC 9039 6198562 YP_001831893.1 CDS Bind_0754 NC_010581.1 846360 847124 R KEGG: nar:Saro_3091 hypothetical protein; hypothetical protein complement(846360..847124) Beijerinckia indica subsp. indica ATCC 9039 6200631 YP_001831894.1 CDS Bind_0755 NC_010581.1 847231 849219 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein; hypothetical protein complement(847231..849219) Beijerinckia indica subsp. indica ATCC 9039 6199628 YP_001831895.1 CDS Bind_0756 NC_010581.1 849301 850107 R KEGG: gdi:GDI2237 hypothetical protein; hypothetical protein complement(849301..850107) Beijerinckia indica subsp. indica ATCC 9039 6198453 YP_001831896.1 CDS Bind_0757 NC_010581.1 850406 851038 D KEGG: rpe:RPE_0755 DedA family; DedA family protein 850406..851038 Beijerinckia indica subsp. indica ATCC 9039 6200264 YP_001831897.1 CDS Bind_0758 NC_010581.1 851038 851541 D KEGG: bja:blr1340 hypothetical protein; hypothetical protein 851038..851541 Beijerinckia indica subsp. indica ATCC 9039 6198439 YP_001831898.1 CDS Bind_0759 NC_010581.1 851543 852718 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mex:Mext_1640 radical SAM enzyme, Cfr family; radical SAM protein complement(851543..852718) Beijerinckia indica subsp. indica ATCC 9039 6198813 YP_001831899.1 CDS Bind_0760 NC_010581.1 853023 853799 D PFAM: protein of unknown function DUF541; KEGG: rpc:RPC_0217 protein of unknown function DUF541; hypothetical protein 853023..853799 Beijerinckia indica subsp. indica ATCC 9039 6198498 YP_001831900.1 CDS Bind_0761 NC_010581.1 854051 854464 R TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: xoo:XOO0606 XorII very-short-patch-repair endonuclease; DNA mismatch endonuclease Vsr complement(854051..854464) Beijerinckia indica subsp. indica ATCC 9039 6199069 YP_001831901.1 CDS Bind_0762 NC_010581.1 854467 854628 R hypothetical protein complement(854467..854628) Beijerinckia indica subsp. indica ATCC 9039 6200148 YP_001831902.1 CDS Bind_0763 NC_010581.1 854804 855757 R KEGG: ter:Tery_0137 hypothetical protein; hypothetical protein complement(854804..855757) Beijerinckia indica subsp. indica ATCC 9039 6200003 YP_001831903.1 CDS Bind_0764 NC_010581.1 855765 856880 R KEGG: sus:Acid_1680 hypothetical protein; hypothetical protein complement(855765..856880) Beijerinckia indica subsp. indica ATCC 9039 6199351 YP_001831904.1 CDS Bind_0765 NC_010581.1 856873 858726 R PFAM: protein of unknown function DUF262; KEGG: pth:PTH_0153 hypothetical protein; hypothetical protein complement(856873..858726) Beijerinckia indica subsp. indica ATCC 9039 6199216 YP_001831905.1 CDS Bind_0766 NC_010581.1 858726 860192 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: esa:ESA_pESA2p06562 hypothetical protein; DNA-cytosine methyltransferase complement(858726..860192) Beijerinckia indica subsp. indica ATCC 9039 6199266 YP_001831906.1 CDS Bind_0767 NC_010581.1 860732 862225 R KEGG: rru:Rru_A1927 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase complement(860732..862225) Beijerinckia indica subsp. indica ATCC 9039 6198434 YP_001831907.1 CDS Bind_0768 NC_010581.1 862471 863097 D TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: reu:Reut_C5986 NAD(P)H dehydrogenase (quinone):flavodoxin/nitric oxide synthase; flavoprotein WrbA 862471..863097 Beijerinckia indica subsp. indica ATCC 9039 6199620 YP_001831908.1 CDS thyX NC_010581.1 863122 864099 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(863122..864099) Beijerinckia indica subsp. indica ATCC 9039 6198963 YP_001831909.1 CDS Bind_0770 NC_010581.1 864170 864958 R PFAM: Abortive infection protein; KEGG: pcl:Pcal_0124 abortive infection protein; abortive infection protein complement(864170..864958) Beijerinckia indica subsp. indica ATCC 9039 6200334 YP_001831910.1 CDS Bind_0771 NC_010581.1 865429 865983 D PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 protein of unknown function DUF1321; hypothetical protein 865429..865983 Beijerinckia indica subsp. indica ATCC 9039 6198450 YP_001831911.1 CDS Bind_0772 NC_010581.1 866007 866216 D KEGG: azc:AZC_2567 hypothetical protein; hypothetical protein 866007..866216 Beijerinckia indica subsp. indica ATCC 9039 6198635 YP_001831912.1 CDS Bind_0773 NC_010581.1 866223 866486 D KEGG: atc:AGR_C_3716 hypothetical protein; hypothetical protein 866223..866486 Beijerinckia indica subsp. indica ATCC 9039 6199438 YP_001831913.1 CDS Bind_0774 NC_010581.1 866745 867773 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2473 alcohol dehydrogenase; alcohol dehydrogenase 866745..867773 Beijerinckia indica subsp. indica ATCC 9039 6200111 YP_001831914.1 CDS Bind_0775 NC_010581.1 867817 869208 D PFAM: Aldehyde Dehydrogenase_; KEGG: ppu:PP_2488 succinic-semialdehyde dehydrogenase, putative; aldehyde dehydrogenase 867817..869208 Beijerinckia indica subsp. indica ATCC 9039 6200041 YP_001831915.1 CDS Bind_0776 NC_010581.1 869268 870170 R PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: nwi:Nwi_2367 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase complement(869268..870170) Beijerinckia indica subsp. indica ATCC 9039 6200107 YP_001831916.1 CDS Bind_0777 NC_010581.1 870379 871182 R PFAM: OmpW family protein; KEGG: xau:Xaut_1968 OmpW family protein; OmpW family protein complement(870379..871182) Beijerinckia indica subsp. indica ATCC 9039 6200688 YP_001831917.1 CDS Bind_0778 NC_010581.1 872009 872722 D KEGG: mex:Mext_0401 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 872009..872722 Beijerinckia indica subsp. indica ATCC 9039 6200287 YP_001831918.1 CDS Bind_0779 NC_010581.1 872727 873374 D PFAM: Ham1 family protein; KEGG: mex:Mext_0402 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Ham1 family protein 872727..873374 Beijerinckia indica subsp. indica ATCC 9039 6201136 YP_001831919.1 CDS Bind_0780 NC_010581.1 873590 873904 D KEGG: rpd:RPD_2935 hypothetical protein; hypothetical protein 873590..873904 Beijerinckia indica subsp. indica ATCC 9039 6200653 YP_001831920.1 CDS Bind_0781 NC_010581.1 874017 874331 R hypothetical protein complement(874017..874331) Beijerinckia indica subsp. indica ATCC 9039 6201825 YP_001831921.1 CDS Bind_0782 NC_010581.1 874511 875371 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: pmt:PMT1382 hypothetical protein; phytanoyl-CoA dioxygenase 874511..875371 Beijerinckia indica subsp. indica ATCC 9039 6199433 YP_001831922.1 CDS Bind_0783 NC_010581.1 875431 875748 R hypothetical protein complement(875431..875748) Beijerinckia indica subsp. indica ATCC 9039 6201858 YP_001831923.1 CDS Bind_0784 NC_010581.1 875958 876842 D KEGG: bra:BRADO1008 hypothetical protein; hypothetical protein 875958..876842 Beijerinckia indica subsp. indica ATCC 9039 6199067 YP_001831924.1 CDS Bind_0785 NC_010581.1 876857 878257 D KEGG: bja:blr4318 hypothetical protein; hypothetical protein 876857..878257 Beijerinckia indica subsp. indica ATCC 9039 6199381 YP_001831925.1 CDS Bind_0786 NC_010581.1 878706 879080 D hypothetical protein 878706..879080 Beijerinckia indica subsp. indica ATCC 9039 6200633 YP_001831926.1 CDS Bind_0787 NC_010581.1 879153 881555 R PFAM: UvrD/REP helicase; KEGG: rpa:RPA3506 DNA helicase II; UvrD/REP helicase complement(879153..881555) Beijerinckia indica subsp. indica ATCC 9039 6201820 YP_001831927.1 CDS Bind_0788 NC_010581.1 881712 882659 D PFAM: aldo/keto reductase; KEGG: xau:Xaut_0990 aldo/keto reductase; aldo/keto reductase 881712..882659 Beijerinckia indica subsp. indica ATCC 9039 6200552 YP_001831928.1 CDS Bind_0789 NC_010581.1 882888 883232 R hypothetical protein complement(882888..883232) Beijerinckia indica subsp. indica ATCC 9039 6198857 YP_001831929.1 CDS Bind_0790 NC_010581.1 883687 883947 R hypothetical protein complement(883687..883947) Beijerinckia indica subsp. indica ATCC 9039 6201829 YP_001831930.1 CDS Bind_0791 NC_010581.1 884038 884982 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_1730 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(884038..884982) Beijerinckia indica subsp. indica ATCC 9039 6201758 YP_001831931.1 CDS Bind_0792 NC_010581.1 885075 886130 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: gdi:GDI2842 putative NAD dependent epimerase/dehydratase protein; NAD-dependent epimerase/dehydratase 885075..886130 Beijerinckia indica subsp. indica ATCC 9039 6201151 YP_001831932.1 CDS Bind_0793 NC_010581.1 886158 886367 R hypothetical protein complement(886158..886367) Beijerinckia indica subsp. indica ATCC 9039 6200607 YP_001831933.1 CDS Bind_0794 NC_010581.1 886417 886824 R hypothetical protein complement(886417..886824) Beijerinckia indica subsp. indica ATCC 9039 6200323 YP_001831934.1 CDS Bind_0795 NC_010581.1 887226 888530 R KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(887226..888530) Beijerinckia indica subsp. indica ATCC 9039 6201101 YP_001831935.1 CDS Bind_0796 NC_010581.1 889086 890120 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: maq:Maqu_1687 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 889086..890120 Beijerinckia indica subsp. indica ATCC 9039 6198411 YP_001831936.1 CDS Bind_0797 NC_010581.1 890259 891239 D SMART: PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_4304 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 890259..891239 Beijerinckia indica subsp. indica ATCC 9039 6199090 YP_001831937.1 CDS Bind_0798 NC_010581.1 891363 891734 D hypothetical protein 891363..891734 Beijerinckia indica subsp. indica ATCC 9039 6198542 YP_001831938.1 CDS Bind_0799 NC_010581.1 891749 892588 D PFAM: Gp37Gp68 family protein; KEGG: nfa:nfa39500 hypothetical protein; Gp37Gp68 family protein 891749..892588 Beijerinckia indica subsp. indica ATCC 9039 6199964 YP_001831939.1 CDS Bind_0800 NC_010581.1 892682 893026 D KEGG: rpe:RPE_2366 hypothetical protein; hypothetical protein 892682..893026 Beijerinckia indica subsp. indica ATCC 9039 6200875 YP_001831940.1 CDS Bind_0801 NC_010581.1 893051 893917 D KEGG: gur:Gura_3491 GTPase or GTP-binding protein-like protein; GTPase or GTP-binding protein-like protein 893051..893917 Beijerinckia indica subsp. indica ATCC 9039 6200991 YP_001831941.1 CDS Bind_0802 NC_010581.1 893905 894489 R PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rpa:RPA0951 nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(893905..894489) Beijerinckia indica subsp. indica ATCC 9039 6201392 YP_001831942.1 CDS Bind_0803 NC_010581.1 894569 895438 D PFAM: Aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase; aldose 1-epimerase 894569..895438 Beijerinckia indica subsp. indica ATCC 9039 6200792 YP_001831943.1 CDS Bind_0804 NC_010581.1 895488 895766 D KEGG: gdi:GDI3845 hypothetical protein; hypothetical protein 895488..895766 Beijerinckia indica subsp. indica ATCC 9039 6200990 YP_001831944.1 CDS Bind_0805 NC_010581.1 895903 896865 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mlo:mlr6508 methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase 895903..896865 Beijerinckia indica subsp. indica ATCC 9039 6200647 YP_001831945.1 CDS Bind_0806 NC_010581.1 896991 898514 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: azc:AZC_2186 putative ATPase; lipopolysaccharide biosynthesis protein 896991..898514 Beijerinckia indica subsp. indica ATCC 9039 6201605 YP_001831946.1 CDS Bind_0807 NC_010581.1 898628 898840 R KEGG: mex:Mext_1606 hypothetical protein; hypothetical protein complement(898628..898840) Beijerinckia indica subsp. indica ATCC 9039 6200642 YP_001831947.1 CDS Bind_0808 NC_010581.1 899011 900090 D PFAM: cytochrome oxidase assembly; KEGG: bja:bll4968 cytochrome oxidase assembly factor; cytochrome oxidase assembly 899011..900090 Beijerinckia indica subsp. indica ATCC 9039 6201570 YP_001831948.1 CDS Bind_0809 NC_010581.1 900382 901437 D PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_7850 putative HlyD-family secretion protein; secretion protein HlyD family protein 900382..901437 Beijerinckia indica subsp. indica ATCC 9039 6201489 YP_001831949.1 CDS Bind_0810 NC_010581.1 901394 904192 D PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bbt:BBta_7849 putative ABC transporter (protein fusion consisting of two ATP-binding domains and permease); ABC transporter-like protein 901394..904192 Beijerinckia indica subsp. indica ATCC 9039 6201499 YP_001831950.1 CDS Bind_0811 NC_010581.1 904254 905381 D PFAM: ABC-2 type transporter; KEGG: bbt:BBta_7848 putative ABC transporter (permease protein); ABC-2 type transporter 904254..905381 Beijerinckia indica subsp. indica ATCC 9039 6201821 YP_001831951.1 CDS Bind_0812 NC_010581.1 905472 906755 R catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase complement(905472..906755) Beijerinckia indica subsp. indica ATCC 9039 6201104 YP_001831952.1 CDS Bind_0813 NC_010581.1 906788 907477 R TIGRFAM: dethiobiotin synthase; KEGG: gbe:GbCGDNIH1_0496 dethiobiotin synthetase; dethiobiotin synthase complement(906788..907477) Beijerinckia indica subsp. indica ATCC 9039 6200580 YP_001831953.1 CDS Bind_0814 NC_010581.1 907706 908866 R KEGG: ccr:CC_1576 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; 8-amino-7-oxononanoate synthase complement(907706..908866) Beijerinckia indica subsp. indica ATCC 9039 6200974 YP_001831954.1 CDS Bind_0815 NC_010581.1 908995 910278 D TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gdi:GDI1919 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 908995..910278 Beijerinckia indica subsp. indica ATCC 9039 6200866 YP_001831955.1 CDS Bind_0816 NC_010581.1 910275 910487 R hypothetical protein complement(910275..910487) Beijerinckia indica subsp. indica ATCC 9039 6198920 YP_001831956.1 CDS Bind_0817 NC_010581.1 910698 911756 R PFAM: acyltransferase 3; KEGG: bcz:BCZK5150 probable membrane protein; acyltransferase 3 complement(910698..911756) Beijerinckia indica subsp. indica ATCC 9039 6198955 YP_001831957.1 CDS Bind_0818 NC_010581.1 911789 912067 R hypothetical protein complement(911789..912067) Beijerinckia indica subsp. indica ATCC 9039 6198949 YP_001831958.1 CDS Bind_0819 NC_010581.1 912153 914606 R KEGG: atc:AGR_C_19 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B complement(912153..914606) Beijerinckia indica subsp. indica ATCC 9039 6200465 YP_001831959.1 CDS Bind_0820 NC_010581.1 914875 915129 D KEGG: bbt:BBta_2168 hypothetical protein; hypothetical protein 914875..915129 Beijerinckia indica subsp. indica ATCC 9039 6199427 YP_001831960.1 CDS Bind_0821 NC_010581.1 915188 915613 R KEGG: xau:Xaut_0101 hypothetical protein; hypothetical protein complement(915188..915613) Beijerinckia indica subsp. indica ATCC 9039 6199782 YP_001831961.1 CDS Bind_0822 NC_010581.1 915832 916317 R KEGG: bra:BRADO5428 hypothetical protein; hypothetical protein complement(915832..916317) Beijerinckia indica subsp. indica ATCC 9039 6200066 YP_001831962.1 CDS Bind_0823 NC_010581.1 916565 919162 R KEGG: rpa:RPA4433 endopeptidase Clp: ATP-binding subunit B, ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(916565..919162) Beijerinckia indica subsp. indica ATCC 9039 6198882 YP_001831963.1 CDS Bind_0824 NC_010581.1 919528 920565 R KEGG: mex:Mext_0953 hypothetical protein; hypothetical protein complement(919528..920565) Beijerinckia indica subsp. indica ATCC 9039 6200657 YP_001831964.1 CDS Bind_0825 NC_010581.1 921132 922052 R TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: bbt:BBta_7605 putative protein methyltransferase HemK modifies release factors RF-1 and RF-2; protein-(glutamine-N5) methyltransferase complement(921132..922052) Beijerinckia indica subsp. indica ATCC 9039 6201531 YP_001831965.1 CDS Bind_0826 NC_010581.1 922049 924022 R molecular chaperone; heat shock protein 90 complement(922049..924022) Beijerinckia indica subsp. indica ATCC 9039 6201458 YP_001831966.1 CDS Bind_0827 NC_010581.1 924550 924957 D KEGG: bja:bll0464 hypothetical protein; hypothetical protein 924550..924957 Beijerinckia indica subsp. indica ATCC 9039 6200333 YP_001831967.1 CDS Bind_0828 NC_010581.1 925038 925808 R PFAM: protein of unknown function UPF0005; KEGG: azc:AZC_0959 hypothetical protein; hypothetical protein complement(925038..925808) Beijerinckia indica subsp. indica ATCC 9039 6201287 YP_001831968.1 CDS Bind_0829 NC_010581.1 926071 928686 R PFAM: protein of unknown function DUF214; KEGG: bja:blr0461 probable ABC transporter permease protein; hypothetical protein complement(926071..928686) Beijerinckia indica subsp. indica ATCC 9039 6201840 YP_001831969.1 CDS Bind_0830 NC_010581.1 928683 929396 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0285 ABC transporter related; ABC transporter-like protein complement(928683..929396) Beijerinckia indica subsp. indica ATCC 9039 6200731 YP_001831970.1 CDS Bind_0831 NC_010581.1 929582 930328 D PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 lipolytic protein G-D-S-L family; GDSL family lipase 929582..930328 Beijerinckia indica subsp. indica ATCC 9039 6200925 YP_001831971.1 CDS Bind_0832 NC_010581.1 930407 930940 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: bra:BRADO0401 putative 2'-5' RNA ligase; 2'-5' RNA ligase 930407..930940 Beijerinckia indica subsp. indica ATCC 9039 6200255 YP_001831972.1 CDS Bind_0833 NC_010581.1 930977 932419 R PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450; cytochrome P450 complement(930977..932419) Beijerinckia indica subsp. indica ATCC 9039 6201388 YP_001831973.1 CDS Bind_0834 NC_010581.1 933160 934617 D hypothetical protein 933160..934617 Beijerinckia indica subsp. indica ATCC 9039 6199073 YP_001831974.1 CDS Bind_0835 NC_010581.1 934732 935550 D PFAM: polysaccharide export protein; KEGG: har:HEAR0714 putative polysaccharide export protein; polysaccharide export protein 934732..935550 Beijerinckia indica subsp. indica ATCC 9039 6201822 YP_001831975.1 CDS Bind_0836 NC_010581.1 936525 937697 D PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7078 putative glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 936525..937697 Beijerinckia indica subsp. indica ATCC 9039 6201834 YP_001831976.1 CDS Bind_0837 NC_010581.1 937793 940072 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase; lipopolysaccharide biosynthesis protein 937793..940072 Beijerinckia indica subsp. indica ATCC 9039 6200266 YP_001831977.1 CDS Bind_0838 NC_010581.1 940080 941129 D PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A2618 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 940080..941129 Beijerinckia indica subsp. indica ATCC 9039 6199551 YP_001831978.1 CDS Bind_0839 NC_010581.1 941170 942246 D PFAM: glycosyl transferase group 1; KEGG: hau:Haur_4807 phosphatidylinositol alpha-mannosyltransferase; group 1 glycosyl transferase 941170..942246 Beijerinckia indica subsp. indica ATCC 9039 6200587 YP_001831979.1 CDS Bind_0840 NC_010581.1 942236 943432 D PFAM: glycosyl transferase group 1; KEGG: bmu:Bmul_4910 glycosyl transferase group 1; group 1 glycosyl transferase 942236..943432 Beijerinckia indica subsp. indica ATCC 9039 6198482 YP_001831980.1 CDS Bind_0841 NC_010581.1 943432 944583 D PFAM: glycosyl transferase group 1; KEGG: amr:AM1_1894 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 943432..944583 Beijerinckia indica subsp. indica ATCC 9039 6198440 YP_001831981.1 CDS Bind_0842 NC_010581.1 944591 946087 D KEGG: ava:Ava_1124 hypothetical protein; hypothetical protein 944591..946087 Beijerinckia indica subsp. indica ATCC 9039 6201180 YP_001831982.1 CDS Bind_0843 NC_010581.1 946113 947348 D KEGG: det:DET0108 endonuclease/exonuclease/phosphatase family protein; hypothetical protein 946113..947348 Beijerinckia indica subsp. indica ATCC 9039 6200701 YP_001831983.1 CDS Bind_0844 NC_010581.1 947491 948336 D PFAM: glycosyl transferase family 2; KEGG: reh:H16_B0041 predicted glycosyltransferase; glycosyl transferase family protein 947491..948336 Beijerinckia indica subsp. indica ATCC 9039 6198657 YP_001831984.1 CDS Bind_0845 NC_010581.1 949329 952688 D TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pst:PSPTO_2149 pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component; amino acid adenylation domain-containing protein 949329..952688 Beijerinckia indica subsp. indica ATCC 9039 6199094 YP_001831985.1 CDS Bind_0846 NC_010581.1 952956 961088 D TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase ; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; amino acid adenylation domain-containing protein 952956..961088 Beijerinckia indica subsp. indica ATCC 9039 6199027 YP_001831986.1 CDS Bind_0847 NC_010581.1 961085 963907 D PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2581 condensation domain; condensation domain-containing protein 961085..963907 Beijerinckia indica subsp. indica ATCC 9039 6199637 YP_001831987.1 CDS Bind_0848 NC_010581.1 964125 965300 D KEGG: bha:BH0727 hypothetical protein; hypothetical protein 964125..965300 Beijerinckia indica subsp. indica ATCC 9039 6198429 YP_001831988.1 CDS Bind_0849 NC_010581.1 965210 965920 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: mes:Meso_2583 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(965210..965920) Beijerinckia indica subsp. indica ATCC 9039 6199694 YP_001831989.1 CDS pepN NC_010581.1 966080 968737 R TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: xau:Xaut_4749 aminopeptidase N; aminopeptidase N complement(966080..968737) Beijerinckia indica subsp. indica ATCC 9039 6201336 YP_001831990.1 CDS Bind_0851 NC_010581.1 968937 969494 D KEGG: bja:bll4707 hypothetical protein; hypothetical protein 968937..969494 Beijerinckia indica subsp. indica ATCC 9039 6201562 YP_001831991.1 CDS Bind_0852 NC_010581.1 969534 970862 R PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1501 AMP-dependent synthetase and ligase; major facilitator transporter complement(969534..970862) Beijerinckia indica subsp. indica ATCC 9039 6201708 YP_001831992.1 CDS Bind_0853 NC_010581.1 970876 972315 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_2019 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(970876..972315) Beijerinckia indica subsp. indica ATCC 9039 6201147 YP_001831993.1 CDS Bind_0854 NC_010581.1 973045 973485 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hha:Hhal_0152 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 973045..973485 Beijerinckia indica subsp. indica ATCC 9039 6201700 YP_001831994.1 CDS Bind_0855 NC_010581.1 973785 974795 D PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_1373 polyprenyl synthetase; polyprenyl synthetase 973785..974795 Beijerinckia indica subsp. indica ATCC 9039 6201547 YP_001831995.1 CDS Bind_0856 NC_010581.1 974950 976182 D PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB; cell wall hydrolase SleB 974950..976182 Beijerinckia indica subsp. indica ATCC 9039 6198966 YP_001831996.1 CDS Bind_0857 NC_010581.1 976521 978239 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_3111 tetratricopeptide TPR_2 repeat protein; hypothetical protein 976521..978239 Beijerinckia indica subsp. indica ATCC 9039 6198841 YP_001831997.1 CDS Bind_0858 NC_010581.1 978394 979338 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 978394..979338 Beijerinckia indica subsp. indica ATCC 9039 6200466 YP_001831998.1 CDS Bind_0859 NC_010581.1 979472 981622 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0746 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 979472..981622 Beijerinckia indica subsp. indica ATCC 9039 6198950 YP_001831999.1 CDS Bind_0860 NC_010581.1 981626 982513 D KEGG: nwi:Nwi_0880 hypothetical protein; hypothetical protein 981626..982513 Beijerinckia indica subsp. indica ATCC 9039 6199625 YP_001832000.1 CDS Bind_0861 NC_010581.1 982526 983245 R KEGG: mes:Meso_1012 HpcH/HpaI aldolase; citrate lyase subunit beta-like protein complement(982526..983245) Beijerinckia indica subsp. indica ATCC 9039 6199932 YP_001832001.1 CDS Bind_0862 NC_010581.1 983299 983880 R PFAM: NUDIX hydrolase; KEGG: acr:Acry_0324 NUDIX hydrolase; NUDIX hydrolase complement(983299..983880) Beijerinckia indica subsp. indica ATCC 9039 6198674 YP_001832002.1 CDS Bind_0863 NC_010581.1 983884 984675 R PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase; NAD(+) kinase complement(983884..984675) Beijerinckia indica subsp. indica ATCC 9039 6198306 YP_001832003.1 CDS Bind_0864 NC_010581.1 984751 985320 R KEGG: bur:Bcep18194_C6733 hypothetical protein; hypothetical protein complement(984751..985320) Beijerinckia indica subsp. indica ATCC 9039 6199624 YP_001832004.1 CDS Bind_0865 NC_010581.1 985645 986757 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: ava:Ava_4847 glycoside hydrolase, family 3-like; glycoside hydrolase family 3 985645..986757 Beijerinckia indica subsp. indica ATCC 9039 6199623 YP_001832005.1 CDS Bind_0866 NC_010581.1 986778 987797 R PFAM: Bile acid:sodium symporter; KEGG: cak:Caul_0525 bile acid:sodium symporter; bile acid:sodium symporter complement(986778..987797) Beijerinckia indica subsp. indica ATCC 9039 6201411 YP_001832006.1 CDS Bind_0867 NC_010581.1 988310 988639 R hypothetical protein complement(988310..988639) Beijerinckia indica subsp. indica ATCC 9039 6200627 YP_001832007.1 CDS greA NC_010581.1 989004 989477 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(989004..989477) Beijerinckia indica subsp. indica ATCC 9039 6199426 YP_001832008.1 CDS Bind_0869 NC_010581.1 989594 992917 R TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: azc:AZC_1145 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase large subunit complement(989594..992917) Beijerinckia indica subsp. indica ATCC 9039 6200289 YP_001832009.1 CDS Bind_0870 NC_010581.1 993375 993962 R KEGG: mex:Mext_2468 hypothetical protein; hypothetical protein complement(993375..993962) Beijerinckia indica subsp. indica ATCC 9039 6199372 YP_001832010.1 CDS Bind_0871 NC_010581.1 993976 994956 R KEGG: mex:Mext_4039 hypothetical protein; hypothetical protein complement(993976..994956) Beijerinckia indica subsp. indica ATCC 9039 6200048 YP_001832011.1 CDS Bind_0872 NC_010581.1 995441 996064 D PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpe:RPE_2325 transglutaminase family protein cysteine peptidase, BTLCP; transglutaminase 995441..996064 Beijerinckia indica subsp. indica ATCC 9039 6198979 YP_001832012.1 CDS Bind_0873 NC_010581.1 996162 997157 D PFAM: aldo/keto reductase; KEGG: pap:PSPA7_4242 probable oxidoreductase; aldo/keto reductase 996162..997157 Beijerinckia indica subsp. indica ATCC 9039 6199277 YP_001832013.1 CDS Bind_0874 NC_010581.1 997228 997755 R KEGG: mex:Mext_4257 hypothetical protein; hypothetical protein complement(997228..997755) Beijerinckia indica subsp. indica ATCC 9039 6201403 YP_001832014.1 CDS Bind_0875 NC_010581.1 997952 999283 R PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: gbe:GbCGDNIH1_0861 nucleoside permease NupC; Na+ dependent nucleoside transporter complement(997952..999283) Beijerinckia indica subsp. indica ATCC 9039 6201773 YP_001832015.1 CDS Bind_0876 NC_010581.1 999353 1000120 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azc:AZC_4173 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(999353..1000120) Beijerinckia indica subsp. indica ATCC 9039 6200635 YP_001832016.1 CDS Bind_0877 NC_010581.1 1000180 1000863 R TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase; phosphoglycolate phosphatase complement(1000180..1000863) Beijerinckia indica subsp. indica ATCC 9039 6201423 YP_001832017.1 CDS Bind_0878 NC_010581.1 1001156 1001569 D KEGG: mex:Mext_2297 hypothetical protein; hypothetical protein 1001156..1001569 Beijerinckia indica subsp. indica ATCC 9039 6199489 YP_001832018.1 CDS Bind_0879 NC_010581.1 1001735 1002445 D KEGG: rpe:RPE_1987 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 1001735..1002445 Beijerinckia indica subsp. indica ATCC 9039 6198257 YP_001832019.1 CDS Bind_0880 NC_010581.1 1002452 1003027 D KEGG: azc:AZC_2357 hypothetical protein; hypothetical protein 1002452..1003027 Beijerinckia indica subsp. indica ATCC 9039 6201267 YP_001832020.1 CDS Bind_0881 NC_010581.1 1003260 1004672 D TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rpb:RPB_3384 glutathione reductase; glutathione-disulfide reductase 1003260..1004672 Beijerinckia indica subsp. indica ATCC 9039 6198894 YP_001832021.1 CDS Bind_0882 NC_010581.1 1004825 1005079 R hypothetical protein complement(1004825..1005079) Beijerinckia indica subsp. indica ATCC 9039 6200924 YP_001832022.1 CDS Bind_0883 NC_010581.1 1005289 1005861 D PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR; MarR family transcriptional regulator 1005289..1005861 Beijerinckia indica subsp. indica ATCC 9039 6200695 YP_001832023.1 CDS Bind_0884 NC_010581.1 1006360 1007730 D PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1377 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 1006360..1007730 Beijerinckia indica subsp. indica ATCC 9039 6199755 YP_001832024.1 CDS Bind_0885 NC_010581.1 1007887 1009143 R PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: xau:Xaut_4413 protein of unknown function DUF900 hydrolase family protein; hypothetical protein complement(1007887..1009143) Beijerinckia indica subsp. indica ATCC 9039 6201637 YP_001832025.1 CDS Bind_0886 NC_010581.1 1009312 1010154 R PFAM: transglutaminase domain protein; KEGG: rle:RL1406 putative transglutaminase family protein; transglutaminase domain-containing protein complement(1009312..1010154) Beijerinckia indica subsp. indica ATCC 9039 6200625 YP_001832026.1 CDS Bind_0887 NC_010581.1 1010758 1011330 R PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein; PEBP family protein complement(1010758..1011330) Beijerinckia indica subsp. indica ATCC 9039 6200662 YP_001832027.1 CDS prfA NC_010581.1 1011639 1012715 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(1011639..1012715) Beijerinckia indica subsp. indica ATCC 9039 6200747 YP_001832028.1 CDS Bind_0890 NC_010581.1 1012979 1015246 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: azc:AZC_4491 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase PtsP complement(1012979..1015246) Beijerinckia indica subsp. indica ATCC 9039 6201001 YP_001832029.1 CDS Bind_0891 NC_010581.1 1015522 1016757 R KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase complement(1015522..1016757) Beijerinckia indica subsp. indica ATCC 9039 6201817 YP_001832030.1 CDS Bind_0892 NC_010581.1 1016957 1017265 R KEGG: rpb:RPB_3901 transglycosylase-associated protein; hypothetical protein complement(1016957..1017265) Beijerinckia indica subsp. indica ATCC 9039 6199197 YP_001832031.1 CDS Bind_0893 NC_010581.1 1017520 1017816 D PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 protein of unknown function DUF339; hypothetical protein 1017520..1017816 Beijerinckia indica subsp. indica ATCC 9039 6199180 YP_001832032.1 CDS Bind_0894 NC_010581.1 1017855 1021376 D KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1017855..1021376 Beijerinckia indica subsp. indica ATCC 9039 6198242 YP_001832033.1 CDS Bind_0895 NC_010581.1 1021381 1021692 D hypothetical protein 1021381..1021692 Beijerinckia indica subsp. indica ATCC 9039 6198374 YP_001832034.1 CDS Bind_0896 NC_010581.1 1021780 1023798 R KEGG: bte:BTH_I3136 hypothetical protein; hypothetical protein complement(1021780..1023798) Beijerinckia indica subsp. indica ATCC 9039 6200366 YP_001832035.1 CDS Bind_0897 NC_010581.1 1024132 1024707 D PFAM: protein of unknown function DUF1275; KEGG: azc:AZC_4159 hypothetical protein; hypothetical protein 1024132..1024707 Beijerinckia indica subsp. indica ATCC 9039 6200690 YP_001832036.1 CDS Bind_0898 NC_010581.1 1024923 1025156 D hypothetical protein 1024923..1025156 Beijerinckia indica subsp. indica ATCC 9039 6200626 YP_001832037.1 CDS Bind_0899 NC_010581.1 1025517 1026830 D KEGG: dar:Daro_2929 hypothetical protein; hypothetical protein 1025517..1026830 Beijerinckia indica subsp. indica ATCC 9039 6201057 YP_001832038.1 CDS Bind_0900 NC_010581.1 1026844 1027425 R PFAM: regulatory protein TetR; KEGG: gbe:GbCGDNIH1_1544 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1026844..1027425) Beijerinckia indica subsp. indica ATCC 9039 6200605 YP_001832039.1 CDS Bind_0901 NC_010581.1 1027567 1030755 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: gbe:GbCGDNIH1_1542 acriflavin resistance plasma membrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(1027567..1030755) Beijerinckia indica subsp. indica ATCC 9039 6201305 YP_001832040.1 CDS Bind_0902 NC_010581.1 1030878 1032299 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1543 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit complement(1030878..1032299) Beijerinckia indica subsp. indica ATCC 9039 6200969 YP_001832041.1 CDS Bind_0903 NC_010581.1 1032346 1032495 R hypothetical protein complement(1032346..1032495) Beijerinckia indica subsp. indica ATCC 9039 6200709 YP_001832042.1 CDS Bind_0904 NC_010581.1 1032726 1033733 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family; aliphatic sulfonate ABC transporter substrate-binding protein 1032726..1033733 Beijerinckia indica subsp. indica ATCC 9039 6201812 YP_001832043.1 CDS Bind_0905 NC_010581.1 1033780 1034877 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ava:Ava_4760 flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1033780..1034877 Beijerinckia indica subsp. indica ATCC 9039 6199724 YP_001832044.1 CDS Bind_0906 NC_010581.1 1034971 1036296 R KEGG: mlo:mlr7299 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A complement(1034971..1036296) Beijerinckia indica subsp. indica ATCC 9039 6201754 YP_001832045.1 CDS Bind_0907 NC_010581.1 1036702 1038567 D PFAM: cytochrome c class I; KEGG: noc:Noc_2145 L-sorbosone dehydrogenase; cytochrome c class I 1036702..1038567 Beijerinckia indica subsp. indica ATCC 9039 6201755 YP_001832046.1 CDS Bind_0908 NC_010581.1 1038729 1040735 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1038729..1040735) Beijerinckia indica subsp. indica ATCC 9039 6201815 YP_001832047.1 CDS Bind_0909 NC_010581.1 1041032 1042018 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0902 alcohol dehydrogenase; zinc-binding alcohol dehydrogenase family protein complement(1041032..1042018) Beijerinckia indica subsp. indica ATCC 9039 6201824 YP_001832048.1 CDS Bind_0910 NC_010581.1 1042498 1042806 D KEGG: rpc:RPC_3285 hypothetical protein; hypothetical protein 1042498..1042806 Beijerinckia indica subsp. indica ATCC 9039 6200903 YP_001832049.1 CDS Bind_0911 NC_010581.1 1042997 1043302 D KEGG: gox:GOX2170 transmembrane protein; hypothetical protein 1042997..1043302 Beijerinckia indica subsp. indica ATCC 9039 6200706 YP_001832050.1 CDS Bind_0912 NC_010581.1 1043311 1044528 R PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_0630 major facilitator superfamily MFS_1; major facilitator transporter complement(1043311..1044528) Beijerinckia indica subsp. indica ATCC 9039 6200917 YP_001832051.1 CDS Bind_0913 NC_010581.1 1044525 1045583 R PFAM: aldo/keto reductase; KEGG: gdi:GDI1640 oxidoreductase; aldo/keto reductase complement(1044525..1045583) Beijerinckia indica subsp. indica ATCC 9039 6201263 YP_001832052.1 CDS Bind_0914 NC_010581.1 1045807 1047816 D PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2; glycosyl transferase family protein 1045807..1047816 Beijerinckia indica subsp. indica ATCC 9039 6201404 YP_001832053.1 CDS Bind_0915 NC_010581.1 1047926 1048747 D PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase; inositol monophosphatase 1047926..1048747 Beijerinckia indica subsp. indica ATCC 9039 6201733 YP_001832054.1 CDS Bind_0916 NC_010581.1 1048845 1049093 D KEGG: azc:AZC_2380 hypothetical protein; hypothetical protein 1048845..1049093 Beijerinckia indica subsp. indica ATCC 9039 6200649 YP_001832055.1 CDS Bind_0917 NC_010581.1 1049481 1049702 R KEGG: xau:Xaut_1414 hypothetical protein; hypothetical protein complement(1049481..1049702) Beijerinckia indica subsp. indica ATCC 9039 6201530 YP_001832056.1 CDS Bind_0918 NC_010581.1 1049957 1050190 R hypothetical protein complement(1049957..1050190) Beijerinckia indica subsp. indica ATCC 9039 6201734 YP_001832057.1 CDS Bind_0919 NC_010581.1 1050174 1050788 R PFAM: autoinducer synthesis protein; KEGG: bbt:BBta_5196 autoinducer synthesis protein; autoinducer synthesis protein complement(1050174..1050788) Beijerinckia indica subsp. indica ATCC 9039 6201787 YP_001832058.1 CDS Bind_0920 NC_010581.1 1050866 1051672 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: dsh:Dshi_2852 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1050866..1051672) Beijerinckia indica subsp. indica ATCC 9039 6200888 YP_001832059.1 CDS Bind_0921 NC_010581.1 1052492 1053124 R PFAM: ribonuclease HII/HIII; KEGG: sme:SMc00867 ribonuclease HII; ribonuclease H complement(1052492..1053124) Beijerinckia indica subsp. indica ATCC 9039 6201277 YP_001832060.1 CDS Bind_0922 NC_010581.1 1053251 1054414 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bmt:BSUIS_A0415 radical SAM domain protein; radical SAM domain-containing protein complement(1053251..1054414) Beijerinckia indica subsp. indica ATCC 9039 6201786 YP_001832061.1 CDS Bind_0923 NC_010581.1 1054481 1055719 R PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_2584 monooxygenase, FAD-binding; monooxygenase FAD-binding complement(1054481..1055719) Beijerinckia indica subsp. indica ATCC 9039 6201747 YP_001832062.1 CDS Bind_0924 NC_010581.1 1055765 1056025 R KEGG: mes:Meso_1118 hypothetical protein; hypothetical protein complement(1055765..1056025) Beijerinckia indica subsp. indica ATCC 9039 6201744 YP_001832063.1 CDS Bind_0925 NC_010581.1 1056247 1057014 D PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_3461 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 1056247..1057014 Beijerinckia indica subsp. indica ATCC 9039 6200702 YP_001832064.1 CDS Bind_0926 NC_010581.1 1057306 1058142 D KEGG: rpa:RPA3429 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; serine O-acetyltransferase 1057306..1058142 Beijerinckia indica subsp. indica ATCC 9039 6201732 YP_001832065.1 CDS Bind_0927 NC_010581.1 1058347 1058742 D KEGG: rpc:RPC_3143 hypothetical protein; hypothetical protein 1058347..1058742 Beijerinckia indica subsp. indica ATCC 9039 6201648 YP_001832066.1 CDS Bind_0928 NC_010581.1 1058915 1061272 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rpe:RPE_3166 ornithine decarboxylase; ornithine decarboxylase 1058915..1061272 Beijerinckia indica subsp. indica ATCC 9039 6201066 YP_001832067.1 CDS Bind_0929 NC_010581.1 1061512 1062072 D PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0639 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1061512..1062072 Beijerinckia indica subsp. indica ATCC 9039 6200049 YP_001832068.1 CDS Bind_0930 NC_010581.1 1062117 1062767 R PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 protein of unknown function DUF1457; hypothetical protein complement(1062117..1062767) Beijerinckia indica subsp. indica ATCC 9039 6201794 YP_001832069.1 CDS Bind_0931 NC_010581.1 1063055 1066072 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mex:Mext_3659 ribonuclease, Rne/Rng family; ribonuclease complement(1063055..1066072) Beijerinckia indica subsp. indica ATCC 9039 6201793 YP_001832070.1 CDS Bind_0932 NC_010581.1 1066218 1066439 D hypothetical protein 1066218..1066439 Beijerinckia indica subsp. indica ATCC 9039 6198195 YP_001832071.1 CDS Bind_0933 NC_010581.1 1067187 1068704 D PFAM: cell wall hydrolase/autolysin; KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1067187..1068704 Beijerinckia indica subsp. indica ATCC 9039 6199743 YP_001832072.1 CDS Bind_0934 NC_010581.1 1069249 1071660 D KEGG: mex:Mext_3662 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 1069249..1071660 Beijerinckia indica subsp. indica ATCC 9039 6199983 YP_001832073.1 CDS Bind_0935 NC_010581.1 1071872 1072579 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cak:Caul_3346 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1071872..1072579 Beijerinckia indica subsp. indica ATCC 9039 6201102 YP_001832074.1 CDS Bind_0937 NC_010581.1 1073128 1074465 D PFAM: Erythromycin esterase; KEGG: mes:Meso_3528 erythromycin esterase; erythromycin esterase 1073128..1074465 Beijerinckia indica subsp. indica ATCC 9039 6201647 YP_001832075.1 CDS Bind_0939 NC_010581.1 1076787 1077918 D KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein join(1076787..1076855,1076857..1077918) Beijerinckia indica subsp. indica ATCC 9039 6200050 YP_001832076.1 CDS Bind_0940 NC_010581.1 1078149 1078946 D PFAM: Rhomboid family protein; KEGG: xau:Xaut_2361 rhomboid family protein; rhomboid family protein 1078149..1078946 Beijerinckia indica subsp. indica ATCC 9039 6201658 YP_001832077.1 CDS Bind_0942 NC_010581.1 1079798 1081666 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2516 ABC transporter-related protein; ABC transporter-like protein complement(1079798..1081666) Beijerinckia indica subsp. indica ATCC 9039 6201412 YP_001832078.1 CDS Bind_0943 NC_010581.1 1081824 1082633 R KEGG: mex:Mext_2247 hypothetical protein; hypothetical protein complement(1081824..1082633) Beijerinckia indica subsp. indica ATCC 9039 6201248 YP_001832079.1 CDS Bind_0944 NC_010581.1 1082654 1083958 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; helix-turn-helix domain protein; KEGG: azc:AZC_3102 3,4-dihydroxy-2-butanone 4-phosphate synthase; XRE family transcriptional regulator 1082654..1083958 Beijerinckia indica subsp. indica ATCC 9039 6201273 YP_001832080.1 CDS Bind_0945 NC_010581.1 1083985 1084986 D KEGG: bmt:BSUIS_B1014 hypothetical protein; hypothetical protein 1083985..1084986 Beijerinckia indica subsp. indica ATCC 9039 6201398 YP_001832081.1 CDS Bind_0946 NC_010581.1 1085002 1086048 R PFAM: histone deacetylase superfamily; KEGG: xau:Xaut_1155 histone deacetylase superfamily; histone deacetylase superfamily protein complement(1085002..1086048) Beijerinckia indica subsp. indica ATCC 9039 6201659 YP_001832082.1 CDS Bind_0947 NC_010581.1 1086228 1087184 R PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein; metallophosphoesterase complement(1086228..1087184) Beijerinckia indica subsp. indica ATCC 9039 6200658 YP_001832083.1 CDS Bind_0948 NC_010581.1 1087715 1087948 R hypothetical protein complement(1087715..1087948) Beijerinckia indica subsp. indica ATCC 9039 6200754 YP_001832084.1 CDS Bind_0949 NC_010581.1 1088168 1088962 D KEGG: mex:Mext_2900 hypothetical protein; hypothetical protein 1088168..1088962 Beijerinckia indica subsp. indica ATCC 9039 6199334 YP_001832085.1 CDS Bind_0950 NC_010581.1 1088983 1089966 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: afw:Anae109_2819 quinone oxidoreductase putative YhdH/YhfP; quinone oxidoreductase complement(1088983..1089966) Beijerinckia indica subsp. indica ATCC 9039 6201776 YP_001832086.1 CDS Bind_0951 NC_010581.1 1090123 1091136 R KEGG: mlo:mlr7750 alginate lyase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein complement(1090123..1091136) Beijerinckia indica subsp. indica ATCC 9039 6201745 YP_001832087.1 CDS Bind_0952 NC_010581.1 1091261 1091614 D PFAM: helix-turn-helix HxlR type; KEGG: gox:GOX2595 hypothetical protein; HxlR family transcriptional regulator 1091261..1091614 Beijerinckia indica subsp. indica ATCC 9039 6198128 YP_001832088.1 CDS Bind_0953 NC_010581.1 1091684 1092610 R PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1091684..1092610) Beijerinckia indica subsp. indica ATCC 9039 6198271 YP_001832089.1 CDS Bind_0955 NC_010581.1 1092923 1093264 D PFAM: regulatory protein ArsR; KEGG: bja:bll5291 transcriptional regulatory protein; ArsR family transcriptional regulator 1092923..1093264 Beijerinckia indica subsp. indica ATCC 9039 6200524 YP_001832090.1 CDS Bind_0957 NC_010581.1 1093866 1095194 R PFAM: Chloride channel core; KEGG: bra:BRADO3095 putative H(+)/Cl(-) exchange transporter; chloride channel core protein complement(1093866..1095194) Beijerinckia indica subsp. indica ATCC 9039 6200378 YP_001832091.1 CDS Bind_0958 NC_010581.1 1095396 1096124 R PFAM: phosphoribosyltransferase; KEGG: mes:Meso_3530 phosphoribosyltransferase; phosphoribosyltransferase complement(1095396..1096124) Beijerinckia indica subsp. indica ATCC 9039 6198308 YP_001832092.1 CDS Bind_0959 NC_010581.1 1096127 1096789 R KEGG: mva:Mvan_1399 hypothetical protein; hypothetical protein complement(1096127..1096789) Beijerinckia indica subsp. indica ATCC 9039 6198166 YP_001832093.1 CDS Bind_0960 NC_010581.1 1097078 1097959 D PFAM: protein of unknown function DUF72; KEGG: ret:RHE_CH00317 hypothetical protein; hypothetical protein 1097078..1097959 Beijerinckia indica subsp. indica ATCC 9039 6201823 YP_001832094.1 CDS Bind_0961 NC_010581.1 1098001 1099056 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0232 flavin oxidoreductase; NADH:flavin oxidoreductase complement(1098001..1099056) Beijerinckia indica subsp. indica ATCC 9039 6201275 YP_001832095.1 CDS Bind_0962 NC_010581.1 1099222 1099824 R PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B1606 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1099222..1099824) Beijerinckia indica subsp. indica ATCC 9039 6198283 YP_001832096.1 CDS Bind_0963 NC_010581.1 1100079 1101425 R KEGG: xau:Xaut_3567 hypothetical protein; hypothetical protein complement(1100079..1101425) Beijerinckia indica subsp. indica ATCC 9039 6198207 YP_001832097.1 CDS Bind_0964 NC_010581.1 1101844 1102254 D KEGG: xau:Xaut_0417 hypothetical protein; hypothetical protein 1101844..1102254 Beijerinckia indica subsp. indica ATCC 9039 6198604 YP_001832098.1 CDS Bind_0965 NC_010581.1 1102512 1104833 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA1823 TonB dependent receptor; TonB-dependent receptor 1102512..1104833 Beijerinckia indica subsp. indica ATCC 9039 6199134 YP_001832099.1 CDS Bind_0966 NC_010581.1 1105042 1105287 D KEGG: rpd:RPD_0348 UspA; hypothetical protein 1105042..1105287 Beijerinckia indica subsp. indica ATCC 9039 6200207 YP_001832100.1 CDS Bind_0967 NC_010581.1 1105586 1105807 D KEGG: bra:BRADO6018 conserved hypothetical protein; putative signal peptide; hypothetical protein 1105586..1105807 Beijerinckia indica subsp. indica ATCC 9039 6199984 YP_001832101.1 CDS Bind_0968 NC_010581.1 1106150 1107076 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cak:Caul_4334 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1106150..1107076) Beijerinckia indica subsp. indica ATCC 9039 6199564 YP_001832102.1 CDS Bind_0969 NC_010581.1 1107642 1109267 D PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 1107642..1109267 Beijerinckia indica subsp. indica ATCC 9039 6200581 YP_001832103.1 CDS Bind_0970 NC_010581.1 1109457 1110644 D PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3477 major facilitator superfamily MFS_1; major facilitator transporter 1109457..1110644 Beijerinckia indica subsp. indica ATCC 9039 6201149 YP_001832104.1 CDS Bind_0971 NC_010581.1 1110772 1111635 D PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_4587 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1110772..1111635 Beijerinckia indica subsp. indica ATCC 9039 6200582 YP_001832105.1 CDS Bind_0972 NC_010581.1 1111678 1112232 D PFAM: MaoC domain protein dehydratase; KEGG: bja:blr0424 similar to monoamine oxidase regulatory protein; dehydratase 1111678..1112232 Beijerinckia indica subsp. indica ATCC 9039 6198617 YP_001832106.1 CDS Bind_0973 NC_010581.1 1112372 1114588 D TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: mlo:mlr6940 catalase/peroxidase; catalase/peroxidase HPI 1112372..1114588 Beijerinckia indica subsp. indica ATCC 9039 6200656 YP_001832107.1 CDS Bind_0974 NC_010581.1 1114812 1115741 R PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: azc:AZC_4108 two component transcriptional regulator; two component LuxR family transcriptional regulator complement(1114812..1115741) Beijerinckia indica subsp. indica ATCC 9039 6198410 YP_001832108.1 CDS Bind_0975 NC_010581.1 1115731 1119123 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azc:AZC_4107 multi-sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(1115731..1119123) Beijerinckia indica subsp. indica ATCC 9039 6198432 YP_001832109.1 CDS Bind_0976 NC_010581.1 1119427 1120707 D TIGRFAM: urea ABC transporter, urea binding protein; KEGG: azc:AZC_4106 amide-UreA binding protein precursor; urea ABC transporter urea binding protein 1119427..1120707 Beijerinckia indica subsp. indica ATCC 9039 6199613 YP_001832110.1 CDS Bind_0977 NC_010581.1 1120781 1121707 D TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: azc:AZC_4105 putative branched-chain amino acid transport system permease protein; urea ABC transporter permease UrtB 1120781..1121707 Beijerinckia indica subsp. indica ATCC 9039 6199361 YP_001832111.1 CDS Bind_0978 NC_010581.1 1121718 1122848 D TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: azc:AZC_4104 ABC transporter permease protein; urea ABC transporter permease UrtC 1121718..1122848 Beijerinckia indica subsp. indica ATCC 9039 6198845 YP_001832112.1 CDS Bind_0979 NC_010581.1 1122859 1123623 D TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: azc:AZC_4103 ABC transporter ATP-binding protein; urea ABC transporter ATP-binding protein UrtD 1122859..1123623 Beijerinckia indica subsp. indica ATCC 9039 6198416 YP_001832113.1 CDS Bind_0980 NC_010581.1 1123635 1124324 D KEGG: azc:AZC_4102 putative ABC transporter ATP-binding component; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 1123635..1124324 Beijerinckia indica subsp. indica ATCC 9039 6198618 YP_001832114.1 CDS Bind_0981 NC_010581.1 1124351 1125583 D PFAM: Acetamidase/Formamidase; KEGG: rpd:RPD_3859 formamidase; formamidase 1124351..1125583 Beijerinckia indica subsp. indica ATCC 9039 6198844 YP_001832115.1 CDS Bind_0982 NC_010581.1 1125659 1126009 D TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bra:BRADO6891 putative formamidase regulatory protein FmdB; FmdB family regulatory protein 1125659..1126009 Beijerinckia indica subsp. indica ATCC 9039 6200351 YP_001832116.1 CDS Bind_0983 NC_010581.1 1126230 1127480 R KEGG: mfa:Mfla_0157 hypothetical protein; hypothetical protein complement(1126230..1127480) Beijerinckia indica subsp. indica ATCC 9039 6200307 YP_001832117.1 CDS Bind_0984 NC_010581.1 1127814 1128677 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sco:SCO6555 LysR-family transcriptional regulator; LysR family transcriptional regulator complement(1127814..1128677) Beijerinckia indica subsp. indica ATCC 9039 6200533 YP_001832118.1 CDS Bind_0985 NC_010581.1 1128802 1130019 D KEGG: bld:BLi03580 OxdC; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; oxalate decarboxylase 1128802..1130019 Beijerinckia indica subsp. indica ATCC 9039 6198761 YP_001832119.1 CDS Bind_0986 NC_010581.1 1130143 1131813 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease; major facilitator transporter 1130143..1131813 Beijerinckia indica subsp. indica ATCC 9039 6198526 YP_001832120.1 CDS Bind_0987 NC_010581.1 1131856 1132806 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator; LysR family transcriptional regulator complement(1131856..1132806) Beijerinckia indica subsp. indica ATCC 9039 6200586 YP_001832121.1 CDS Bind_0988 NC_010581.1 1133046 1133519 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bja:bll3138 formate dehydrogenase subunit gamma; NADH dehydrogenase (ubiquinone) 24 kDa subunit 1133046..1133519 Beijerinckia indica subsp. indica ATCC 9039 6200684 YP_001832122.1 CDS Bind_0989 NC_010581.1 1133516 1135066 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bja:bll3137 NADH dehydrogenase I chain F; NADH dehydrogenase (quinone) 1133516..1135066 Beijerinckia indica subsp. indica ATCC 9039 6201436 YP_001832123.1 CDS Bind_0990 NC_010581.1 1135122 1137977 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 1135122..1137977 Beijerinckia indica subsp. indica ATCC 9039 6198934 YP_001832124.1 CDS Bind_0991 NC_010581.1 1137981 1138211 D KEGG: mex:Mext_4407 hypothetical protein; hypothetical protein 1137981..1138211 Beijerinckia indica subsp. indica ATCC 9039 6201337 YP_001832125.1 CDS Bind_0992 NC_010581.1 1138323 1139537 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: bmu:Bmul_5398 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 1138323..1139537 Beijerinckia indica subsp. indica ATCC 9039 6201064 YP_001832126.1 CDS Bind_0993 NC_010581.1 1139596 1140225 D KEGG: gdi:GDI0167 putative molybdopterin-guanine dinucleotide biosynthesis protein A; putative molybdopterin-guanine dinucleotide biosynthesis protein A 1139596..1140225 Beijerinckia indica subsp. indica ATCC 9039 6201244 YP_001832127.1 CDS Bind_0994 NC_010581.1 1140212 1141099 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: gdi:GDI1145 putative formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 1140212..1141099 Beijerinckia indica subsp. indica ATCC 9039 6199026 YP_001832128.1 CDS Bind_0995 NC_010581.1 1141102 1141554 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: noc:Noc_2767 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1141102..1141554) Beijerinckia indica subsp. indica ATCC 9039 6198650 YP_001832129.1 CDS Bind_0997 NC_010581.1 1142570 1144045 D PFAM: protein of unknown function UPF0061; KEGG: rpe:RPE_3277 protein of unknown function UPF0061; hypothetical protein 1142570..1144045 Beijerinckia indica subsp. indica ATCC 9039 6199872 YP_001832130.1 CDS Bind_0998 NC_010581.1 1144142 1145152 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_0946 dihydrouridine synthase DuS; YjbN family TIM-barrel protein 1144142..1145152 Beijerinckia indica subsp. indica ATCC 9039 6200161 YP_001832131.1 CDS Bind_0999 NC_010581.1 1145160 1146083 R PFAM: protein of unknown function DUF815; KEGG: mlo:mlr1073 hypothetical protein; hypothetical protein complement(1145160..1146083) Beijerinckia indica subsp. indica ATCC 9039 6201268 YP_001832132.1 CDS Bind_1000 NC_010581.1 1146514 1146849 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: xau:Xaut_4308 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 1146514..1146849 Beijerinckia indica subsp. indica ATCC 9039 6199446 YP_001832133.1 CDS Bind_1001 NC_010581.1 1146947 1148542 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4228 protein-export membrane protein SecD; protein-export membrane protein SecD 1146947..1148542 Beijerinckia indica subsp. indica ATCC 9039 6200001 YP_001832134.1 CDS Bind_1002 NC_010581.1 1148591 1149550 D TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: bbt:BBta_4405 preprotein translocase subunit SecF; protein-export membrane protein SecF 1148591..1149550 Beijerinckia indica subsp. indica ATCC 9039 6201078 YP_001832135.1 CDS Bind_1003 NC_010581.1 1149671 1150045 D PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 protein of unknown function DUF498; hypothetical protein 1149671..1150045 Beijerinckia indica subsp. indica ATCC 9039 6199616 YP_001832136.1 CDS Bind_1004 NC_010581.1 1150045 1150932 D KEGG: mex:Mext_4225 squalene/phytoene synthase; squalene/phytoene synthase 1150045..1150932 Beijerinckia indica subsp. indica ATCC 9039 6200816 YP_001832137.1 CDS Bind_1005 NC_010581.1 1151029 1152342 D KEGG: rfr:Rfer_3382 hypothetical protein; hypothetical protein 1151029..1152342 Beijerinckia indica subsp. indica ATCC 9039 6199609 YP_001832138.1 CDS ileS NC_010581.1 1152925 1155930 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1152925..1155930 Beijerinckia indica subsp. indica ATCC 9039 6198502 YP_001832139.1 CDS Bind_1007 NC_010581.1 1155959 1156462 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1155959..1156462 Beijerinckia indica subsp. indica ATCC 9039 6200809 YP_001832140.1 CDS Bind_1008 NC_010581.1 1156778 1157503 D KEGG: mex:Mext_2327 hypothetical protein; hypothetical protein 1156778..1157503 Beijerinckia indica subsp. indica ATCC 9039 6201405 YP_001832141.1 CDS Bind_1009 NC_010581.1 1157789 1159195 D PFAM: peptidase M16 domain protein; KEGG: azc:AZC_4242 putative protease precursor; peptidase M16 domain-containing protein 1157789..1159195 Beijerinckia indica subsp. indica ATCC 9039 6200437 YP_001832142.1 CDS Bind_1010 NC_010581.1 1159389 1160669 D PFAM: peptidase M16 domain protein; KEGG: bbt:BBta_1712 putative Zn-dependent protease; peptidase M16 domain-containing protein 1159389..1160669 Beijerinckia indica subsp. indica ATCC 9039 6198697 YP_001832143.1 CDS Bind_1011 NC_010581.1 1160705 1162618 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: nwi:Nwi_2548 DNA mismatch repair protein; DNA mismatch repair protein MutL 1160705..1162618 Beijerinckia indica subsp. indica ATCC 9039 6199443 YP_001832144.1 CDS Bind_1012 NC_010581.1 1162658 1163245 D KEGG: oan:Oant_3962 hypothetical protein; hypothetical protein 1162658..1163245 Beijerinckia indica subsp. indica ATCC 9039 6198727 YP_001832145.1 CDS Bind_1013 NC_010581.1 1163288 1164553 D KEGG: btr:Btr_0639 hypothetical protein; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 1163288..1164553 Beijerinckia indica subsp. indica ATCC 9039 6199754 YP_001832146.1 CDS Bind_1014 NC_010581.1 1164956 1165150 D KEGG: dre:573024 zgc:56152; hypothetical protein 1164956..1165150 Beijerinckia indica subsp. indica ATCC 9039 6201783 YP_001832147.1 CDS Bind_1015 NC_010581.1 1165485 1165919 R PFAM: helix-turn-helix HxlR type; transcriptional regulator PadR family protein; KEGG: bxe:Bxe_A1731 putative transcriptional regulator; HxlR family transcriptional regulator complement(1165485..1165919) Beijerinckia indica subsp. indica ATCC 9039 6198997 YP_001832148.1 CDS Bind_1016 NC_010581.1 1166025 1166798 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1732 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1166025..1166798 Beijerinckia indica subsp. indica ATCC 9039 6198176 YP_001832149.1 CDS Bind_1017 NC_010581.1 1167019 1167378 R PFAM: arsenate reductase and related; KEGG: cak:Caul_2487 arsenate reductase and related; arsenate reductase-like protein complement(1167019..1167378) Beijerinckia indica subsp. indica ATCC 9039 6200668 YP_001832150.1 CDS Bind_1018 NC_010581.1 1167533 1168066 R PFAM: heat shock protein Hsp20; KEGG: mes:Meso_2276 heat shock protein HSP20; heat shock protein Hsp20 complement(1167533..1168066) Beijerinckia indica subsp. indica ATCC 9039 6198956 YP_001832151.1 CDS Bind_1019 NC_010581.1 1168461 1169129 R KEGG: mex:Mext_1528 hypothetical protein; hypothetical protein complement(1168461..1169129) Beijerinckia indica subsp. indica ATCC 9039 6198563 YP_001832152.1 CDS Bind_1020 NC_010581.1 1169523 1170389 D TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: mmr:Mmar10_2449 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1169523..1170389 Beijerinckia indica subsp. indica ATCC 9039 6199033 YP_001832153.1 CDS Bind_1021 NC_010581.1 1170558 1171151 D PFAM: conserved hypothetical protein; KEGG: rpe:RPE_4288 uncharacterised conserved protein UCP033924; hypothetical protein 1170558..1171151 Beijerinckia indica subsp. indica ATCC 9039 6198499 YP_001832154.1 CDS Bind_1022 NC_010581.1 1171294 1172052 D KEGG: azc:AZC_1080 hypothetical protein; hypothetical protein 1171294..1172052 Beijerinckia indica subsp. indica ATCC 9039 6198565 YP_001832155.1 CDS Bind_1023 NC_010581.1 1172176 1172496 R hypothetical protein complement(1172176..1172496) Beijerinckia indica subsp. indica ATCC 9039 6200324 YP_001832156.1 CDS Bind_1024 NC_010581.1 1172685 1173362 R PFAM: ribulose-phosphate 3-epimerase; KEGG: bja:blr5680 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1172685..1173362) Beijerinckia indica subsp. indica ATCC 9039 6198914 YP_001832157.1 CDS Bind_1025 NC_010581.1 1173728 1174285 D KEGG: mlo:mll6729 hypothetical protein; hypothetical protein 1173728..1174285 Beijerinckia indica subsp. indica ATCC 9039 6199041 YP_001832158.1 CDS Bind_1026 NC_010581.1 1174710 1175522 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03424 short chain dehydrogenase; short chain dehydrogenase complement(1174710..1175522) Beijerinckia indica subsp. indica ATCC 9039 6198754 YP_001832159.1 CDS Bind_1027 NC_010581.1 1175731 1177065 R PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_7179 hypothetical protein; FAD linked oxidase domain-containing protein complement(1175731..1177065) Beijerinckia indica subsp. indica ATCC 9039 6198590 YP_001832160.1 CDS Bind_1028 NC_010581.1 1177056 1177511 R KEGG: ret:RHE_CH03426 hypothetical protein; hypothetical protein complement(1177056..1177511) Beijerinckia indica subsp. indica ATCC 9039 6199039 YP_001832161.1 CDS Bind_1029 NC_010581.1 1177519 1178976 R PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 putative integral membrane prenyltransferase protein; hypothetical protein complement(1177519..1178976) Beijerinckia indica subsp. indica ATCC 9039 6201841 YP_001832162.1 CDS Bind_1030 NC_010581.1 1179467 1180024 R TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: rru:Rru_A3564 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase family protein complement(1179467..1180024) Beijerinckia indica subsp. indica ATCC 9039 6199559 YP_001832163.1 CDS Bind_1031 NC_010581.1 1180224 1181729 R TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: pla:Plav_1895 RfaE bifunctional protein; rfaE bifunctional protein complement(1180224..1181729) Beijerinckia indica subsp. indica ATCC 9039 6198576 YP_001832164.1 CDS Bind_1032 NC_010581.1 1182355 1183485 R PFAM: N-acylglucosamine 2-epimerase; KEGG: xau:Xaut_3549 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase complement(1182355..1183485) Beijerinckia indica subsp. indica ATCC 9039 6198468 YP_001832165.1 CDS Bind_1033 NC_010581.1 1183796 1184998 R PFAM: polysaccharide export protein; KEGG: bra:BRADO2217 putative capsule polysaccharide export outer membrane protein precursor; polysaccharide export protein complement(1183796..1184998) Beijerinckia indica subsp. indica ATCC 9039 6198683 YP_001832166.1 CDS Bind_1034 NC_010581.1 1185432 1186904 R TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bra:BRADO2232 putative UDP-glucose lipid carrier transferase; putative membrane protein; undecaprenyl-phosphate glucose phosphotransferase complement(1185432..1186904) Beijerinckia indica subsp. indica ATCC 9039 6199987 YP_001832167.1 CDS Bind_1035 NC_010581.1 1187940 1188212 D hypothetical protein 1187940..1188212 Beijerinckia indica subsp. indica ATCC 9039 6198847 YP_001832168.1 CDS Bind_1036 NC_010581.1 1188613 1189218 D PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase; class II aldolase/adducin family protein 1188613..1189218 Beijerinckia indica subsp. indica ATCC 9039 6198313 YP_001832169.1 CDS Bind_1037 NC_010581.1 1189237 1190421 R Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase complement(1189237..1190421) Beijerinckia indica subsp. indica ATCC 9039 6200778 YP_001832170.1 CDS Bind_1038 NC_010581.1 1190599 1191825 D KEGG: xau:Xaut_0471 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase 1190599..1191825 Beijerinckia indica subsp. indica ATCC 9039 6201851 YP_001832171.1 CDS Bind_1039 NC_010581.1 1191933 1192325 D PFAM: ApaG domain protein; KEGG: bja:bll1101 ApaG; ApaG domain-containing protein 1191933..1192325 Beijerinckia indica subsp. indica ATCC 9039 6199673 YP_001832172.1 CDS Bind_1040 NC_010581.1 1192367 1193545 D TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE 1192367..1193545 Beijerinckia indica subsp. indica ATCC 9039 6198842 YP_001832173.1 CDS ureC NC_010581.1 1193551 1195263 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1193551..1195263) Beijerinckia indica subsp. indica ATCC 9039 6199952 YP_001832174.1 CDS Bind_1042 NC_010581.1 1195512 1195736 D KEGG: rpc:RPC_0822 hypothetical protein; hypothetical protein 1195512..1195736 Beijerinckia indica subsp. indica ATCC 9039 6199204 YP_001832175.1 CDS Bind_1043 NC_010581.1 1195733 1196089 D KEGG: rpc:RPC_0821 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 1195733..1196089 Beijerinckia indica subsp. indica ATCC 9039 6198428 YP_001832176.1 CDS Bind_1044 NC_010581.1 1196460 1197809 D KEGG: azc:AZC_0865 hypothetical protein; hypothetical protein 1196460..1197809 Beijerinckia indica subsp. indica ATCC 9039 6198592 YP_001832177.1 CDS Bind_1045 NC_010581.1 1198569 1199471 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(1198569..1199471) Beijerinckia indica subsp. indica ATCC 9039 6199508 YP_001832178.1 CDS rbfA NC_010581.1 1199514 1199939 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(1199514..1199939) Beijerinckia indica subsp. indica ATCC 9039 6198935 YP_001832179.1 CDS infB NC_010581.1 1200600 1203761 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(1200600..1203761) Beijerinckia indica subsp. indica ATCC 9039 6198654 YP_001832180.1 CDS Bind_1048 NC_010581.1 1203940 1204683 R PFAM: protein of unknown function DUF448; KEGG: rpa:RPA0437 hypothetical protein; hypothetical protein complement(1203940..1204683) Beijerinckia indica subsp. indica ATCC 9039 6198285 YP_001832181.1 CDS Bind_1049 NC_010581.1 1204755 1206371 R KEGG: azc:AZC_0018 transcription termination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor complement(1204755..1206371) Beijerinckia indica subsp. indica ATCC 9039 6198846 YP_001832182.1 CDS Bind_1050 NC_010581.1 1206383 1207327 R PFAM: protein of unknown function DUF150; KEGG: xau:Xaut_0296 protein of unknown function DUF150; hypothetical protein complement(1206383..1207327) Beijerinckia indica subsp. indica ATCC 9039 6200137 YP_001832183.1 CDS Bind_1051 NC_010581.1 1208115 1208678 D PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: rpb:RPB_0585 nitrogen-fixing NifU-like; scaffold protein Nfu/NifU 1208115..1208678 Beijerinckia indica subsp. indica ATCC 9039 6198302 YP_001832184.1 CDS Bind_1052 NC_010581.1 1208825 1209604 D PFAM: peptidase M22 glycoprotease; KEGG: azc:AZC_4704 glycoprotease; peptidase M22 glycoprotease 1208825..1209604 Beijerinckia indica subsp. indica ATCC 9039 6200448 YP_001832185.1 CDS Bind_1053 NC_010581.1 1209606 1210097 D PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll0798 putative acetyltransferase; N-acetyltransferase GCN5 1209606..1210097 Beijerinckia indica subsp. indica ATCC 9039 6199215 YP_001832186.1 CDS Bind_1054 NC_010581.1 1210280 1210846 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bpt:Bpet2481 bacterioferritin comigratory protein; alkyl hydroperoxide reductase 1210280..1210846 Beijerinckia indica subsp. indica ATCC 9039 6199769 YP_001832187.1 CDS Bind_1055 NC_010581.1 1211013 1212545 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1211013..1212545 Beijerinckia indica subsp. indica ATCC 9039 6198171 YP_001832188.1 CDS Bind_1056 NC_010581.1 1212596 1213621 D PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein; PhoH family protein 1212596..1213621 Beijerinckia indica subsp. indica ATCC 9039 6201139 YP_001832189.1 CDS Bind_1057 NC_010581.1 1213638 1214255 D PFAM: protein of unknown function UPF0054; KEGG: mag:amb4465 predicted metal-dependent hydrolase; hypothetical protein 1213638..1214255 Beijerinckia indica subsp. indica ATCC 9039 6200530 YP_001832190.1 CDS Bind_1058 NC_010581.1 1214252 1215286 D PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain containing protein; hypothetical protein 1214252..1215286 Beijerinckia indica subsp. indica ATCC 9039 6201022 YP_001832191.1 CDS Bind_1059 NC_010581.1 1215300 1216952 D TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3208 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1215300..1216952 Beijerinckia indica subsp. indica ATCC 9039 6198208 YP_001832192.1 CDS Bind_1060 NC_010581.1 1217220 1217474 R hypothetical protein complement(1217220..1217474) Beijerinckia indica subsp. indica ATCC 9039 6201799 YP_001832193.1 CDS Bind_1061 NC_010581.1 1217584 1218051 D PFAM: helix-turn-helix domain protein; KEGG: azc:AZC_0013 putative transcriptional regulator; XRE family transcriptional regulator 1217584..1218051 Beijerinckia indica subsp. indica ATCC 9039 6199135 YP_001832194.1 CDS Bind_1062 NC_010581.1 1218364 1219560 D PFAM: S-adenosylmethionine synthetase; KEGG: azc:AZC_0014 S-adenosylmethionine synthetase; methionine adenosyltransferase 1218364..1219560 Beijerinckia indica subsp. indica ATCC 9039 6200564 YP_001832195.1 CDS Bind_1063 NC_010581.1 1219588 1220325 D PFAM: putative methyltransferase; KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1219588..1220325 Beijerinckia indica subsp. indica ATCC 9039 6200382 YP_001832196.1 CDS Bind_1064 NC_010581.1 1220666 1222618 D PFAM: glycosyl transferase family 2; KEGG: xau:Xaut_2382 glycosyl transferase family 2; glycosyl transferase family protein 1220666..1222618 Beijerinckia indica subsp. indica ATCC 9039 6200464 YP_001832197.1 CDS lysK NC_010581.1 1222765 1224468 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 1222765..1224468 Beijerinckia indica subsp. indica ATCC 9039 6199974 YP_001832198.1 CDS Bind_1066 NC_010581.1 1224516 1225157 D PFAM: phospholipase/Carboxylesterase; KEGG: dge:Dgeo_0941 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1224516..1225157 Beijerinckia indica subsp. indica ATCC 9039 6199767 YP_001832199.1 CDS Bind_1067 NC_010581.1 1225215 1225568 D PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 protein of unknown function DUF952; hypothetical protein 1225215..1225568 Beijerinckia indica subsp. indica ATCC 9039 6200181 YP_001832200.1 CDS Bind_1068 NC_010581.1 1225574 1226659 D PFAM: dihydroorotate dehydrogenase; KEGG: rpc:RPC_0755 dihydroorotate dehydrogenase 2; dihydroorotate oxidase 1225574..1226659 Beijerinckia indica subsp. indica ATCC 9039 6199300 YP_001832201.1 CDS Bind_1069 NC_010581.1 1226596 1227981 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: xau:Xaut_1467 MATE efflux family protein; MATE efflux family protein complement(1226596..1227981) Beijerinckia indica subsp. indica ATCC 9039 6200815 YP_001832202.1 CDS Bind_1070 NC_010581.1 1227971 1228300 R KEGG: rpd:RPD_0792 hypothetical protein; hypothetical protein complement(1227971..1228300) Beijerinckia indica subsp. indica ATCC 9039 6201727 YP_001832203.1 CDS Bind_1071 NC_010581.1 1228328 1230052 R PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: azc:AZC_0393 putative ATP dependent DNA ligase; ATP dependent DNA ligase complement(1228328..1230052) Beijerinckia indica subsp. indica ATCC 9039 6199686 YP_001832204.1 CDS Bind_1072 NC_010581.1 1230049 1231083 R KEGG: xau:Xaut_1471 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor complement(1230049..1231083) Beijerinckia indica subsp. indica ATCC 9039 6201094 YP_001832205.1 CDS Bind_1073 NC_010581.1 1231299 1231679 R hypothetical protein complement(1231299..1231679) Beijerinckia indica subsp. indica ATCC 9039 6199521 YP_001832206.1 CDS Bind_1074 NC_010581.1 1232061 1232447 R KEGG: gdi:GDI1327 hypothetical protein; hypothetical protein complement(1232061..1232447) Beijerinckia indica subsp. indica ATCC 9039 6199091 YP_001832207.1 CDS Bind_1075 NC_010581.1 1232803 1233714 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_0727 methyltransferase type 11; type 12 methyltransferase 1232803..1233714 Beijerinckia indica subsp. indica ATCC 9039 6199248 YP_001832208.1 CDS Bind_1076 NC_010581.1 1233869 1235230 D PFAM: ABC-1 domain protein; KEGG: xau:Xaut_1153 ABC-1 domain protein; hypothetical protein 1233869..1235230 Beijerinckia indica subsp. indica ATCC 9039 6201541 YP_001832209.1 CDS Bind_1077 NC_010581.1 1235592 1237247 D KEGG: gbe:GbCGDNIH1_1436 hypothetical cytosolic protein; hypothetical protein 1235592..1237247 Beijerinckia indica subsp. indica ATCC 9039 6199923 YP_001832210.1 CDS Bind_1078 NC_010581.1 1237380 1238810 R PFAM: homospermidine synthase; KEGG: xau:Xaut_2138 homospermidine synthase; homospermidine synthase complement(1237380..1238810) Beijerinckia indica subsp. indica ATCC 9039 6199223 YP_001832211.1 CDS Bind_1079 NC_010581.1 1239006 1239695 R PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7760 hypothetical protein; N-acetyltransferase GCN5 complement(1239006..1239695) Beijerinckia indica subsp. indica ATCC 9039 6198684 YP_001832212.1 CDS Bind_1080 NC_010581.1 1239883 1241013 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: azc:AZC_0333 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(1239883..1241013) Beijerinckia indica subsp. indica ATCC 9039 6200219 YP_001832213.1 CDS mdoG NC_010581.1 1242373 1243974 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1242373..1243974 Beijerinckia indica subsp. indica ATCC 9039 6199087 YP_001832214.1 CDS Bind_1082 NC_010581.1 1244001 1244441 D PFAM: GCN5-related N-acetyltransferase; KEGG: mes:Meso_0956 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1244001..1244441 Beijerinckia indica subsp. indica ATCC 9039 6199878 YP_001832215.1 CDS Bind_1083 NC_010581.1 1244453 1245271 R PFAM: Creatininase; KEGG: mex:Mext_2133 creatininase; creatininase complement(1244453..1245271) Beijerinckia indica subsp. indica ATCC 9039 6199385 YP_001832216.1 CDS Bind_1085 NC_010581.1 1245615 1246433 R hypothetical protein complement(1245615..1246433) Beijerinckia indica subsp. indica ATCC 9039 6200994 YP_001832217.1 CDS Bind_1086 NC_010581.1 1246770 1247972 R PFAM: low temperature requirement A; KEGG: oan:Oant_2126 low temperature requirement A; low temperature requirement A complement(1246770..1247972) Beijerinckia indica subsp. indica ATCC 9039 6201753 YP_001832218.1 CDS Bind_1087 NC_010581.1 1247987 1248253 R KEGG: pap:PSPA7_2235 hypothetical protein; hypothetical protein complement(1247987..1248253) Beijerinckia indica subsp. indica ATCC 9039 6200492 YP_001832219.1 CDS Bind_1088 NC_010581.1 1248459 1248941 R KEGG: bxe:Bxe_B1808 hypothetical protein; hypothetical protein complement(1248459..1248941) Beijerinckia indica subsp. indica ATCC 9039 6200874 YP_001832220.1 CDS Bind_1089 NC_010581.1 1249382 1250440 D PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_7482 putative ABC transporter, periplasmic binding protein; NMT1/THI5-like domain-containing protein 1249382..1250440 Beijerinckia indica subsp. indica ATCC 9039 6200833 YP_001832221.1 CDS Bind_1090 NC_010581.1 1250437 1251222 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_3870 ABC transporter related; ABC transporter-like protein 1250437..1251222 Beijerinckia indica subsp. indica ATCC 9039 6198250 YP_001832222.1 CDS Bind_1091 NC_010581.1 1251219 1252007 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0333 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1251219..1252007 Beijerinckia indica subsp. indica ATCC 9039 6198889 YP_001832223.1 CDS Bind_1092 NC_010581.1 1252168 1253136 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: azc:AZC_4207 putative glycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1252168..1253136 Beijerinckia indica subsp. indica ATCC 9039 6201748 YP_001832224.1 CDS Bind_1093 NC_010581.1 1253491 1254405 D KEGG: mex:Mext_4353 hypothetical protein; hypothetical protein 1253491..1254405 Beijerinckia indica subsp. indica ATCC 9039 6200933 YP_001832225.1 CDS Bind_1094 NC_010581.1 1254419 1254898 R PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: azc:AZC_0511 regulatory protein; MerR family transcriptional regulator complement(1254419..1254898) Beijerinckia indica subsp. indica ATCC 9039 6200102 YP_001832226.1 CDS Bind_1095 NC_010581.1 1255217 1258228 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0814 hypothetical protein; Sel1 domain-containing protein 1255217..1258228 Beijerinckia indica subsp. indica ATCC 9039 6199922 YP_001832227.1 CDS Bind_1096 NC_010581.1 1258844 1260550 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1258844..1260550 Beijerinckia indica subsp. indica ATCC 9039 6198352 YP_001832228.1 CDS Bind_1097 NC_010581.1 1260572 1262617 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1260572..1262617 Beijerinckia indica subsp. indica ATCC 9039 6201270 YP_001832229.1 CDS Bind_1098 NC_010581.1 1262630 1263223 D KEGG: ccr:CC_1593 potassium-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 1262630..1263223 Beijerinckia indica subsp. indica ATCC 9039 6198665 YP_001832230.1 CDS Bind_1099 NC_010581.1 1263220 1265910 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; KEGG: cak:Caul_2695 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 1263220..1265910 Beijerinckia indica subsp. indica ATCC 9039 6199837 YP_001832231.1 CDS Bind_1100 NC_010581.1 1265907 1266599 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cak:Caul_2694 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1265907..1266599 Beijerinckia indica subsp. indica ATCC 9039 6200252 YP_001832232.1 CDS Bind_1101 NC_010581.1 1266777 1267706 D KEGG: xom:XOO_3233 hypothetical protein; hypothetical protein 1266777..1267706 Beijerinckia indica subsp. indica ATCC 9039 6201775 YP_001832233.1 CDS Bind_1102 NC_010581.1 1267875 1271912 R TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase; non-ribosomal peptide synthetase complement(1267875..1271912) Beijerinckia indica subsp. indica ATCC 9039 6200687 YP_001832234.1 CDS Bind_1103 NC_010581.1 1272251 1273099 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2151 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR complement(1272251..1273099) Beijerinckia indica subsp. indica ATCC 9039 6199331 YP_001832235.1 CDS Bind_1104 NC_010581.1 1273365 1273904 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0228 RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 1273365..1273904 Beijerinckia indica subsp. indica ATCC 9039 6200783 YP_001832236.1 CDS Bind_1105 NC_010581.1 1273925 1274776 D KEGG: bbr:BB1303 hypothetical protein; putative transmembrane anti-sigma factor 1273925..1274776 Beijerinckia indica subsp. indica ATCC 9039 6199679 YP_001832237.1 CDS Bind_1106 NC_010581.1 1274868 1275839 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bra:BRADO2148 putative heat shock protein DnaJ; chaperone DnaJ domain-containing protein complement(1274868..1275839) Beijerinckia indica subsp. indica ATCC 9039 6201735 YP_001832238.1 CDS Bind_1107 NC_010581.1 1275992 1276651 R KEGG: mex:Mext_4294 hypothetical protein; hypothetical protein complement(1275992..1276651) Beijerinckia indica subsp. indica ATCC 9039 6200124 YP_001832239.1 CDS Bind_1108 NC_010581.1 1276738 1277364 D KEGG: bcs:BCAN_A0421 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 1276738..1277364 Beijerinckia indica subsp. indica ATCC 9039 6198659 YP_001832240.1 CDS Bind_1109 NC_010581.1 1277621 1279624 R hypothetical protein complement(1277621..1279624) Beijerinckia indica subsp. indica ATCC 9039 6198353 YP_001832241.1 CDS Bind_1110 NC_010581.1 1279813 1280082 D hypothetical protein 1279813..1280082 Beijerinckia indica subsp. indica ATCC 9039 6201836 YP_001832242.1 CDS Bind_1111 NC_010581.1 1280537 1281889 R PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1280537..1281889) Beijerinckia indica subsp. indica ATCC 9039 6199704 YP_001832243.1 CDS Bind_1112 NC_010581.1 1282168 1282488 R hypothetical protein complement(1282168..1282488) Beijerinckia indica subsp. indica ATCC 9039 6200271 YP_001832244.1 CDS Bind_1113 NC_010581.1 1282451 1289929 R PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase; Beta-ketoacyl synthase complement(1282451..1289929) Beijerinckia indica subsp. indica ATCC 9039 6200022 YP_001832245.1 CDS Bind_1114 NC_010581.1 1290116 1290247 R hypothetical protein complement(1290116..1290247) Beijerinckia indica subsp. indica ATCC 9039 6198180 YP_001832246.1 CDS Bind_1115 NC_010581.1 1290795 1291439 R PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO1844 putative glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1290795..1291439) Beijerinckia indica subsp. indica ATCC 9039 6199690 YP_001832247.1 CDS Bind_1116 NC_010581.1 1291516 1293594 R KEGG: gsu:GSU0709 hypothetical protein; hypothetical protein complement(1291516..1293594) Beijerinckia indica subsp. indica ATCC 9039 6201435 YP_001832248.1 CDS Bind_1117 NC_010581.1 1293981 1295633 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1293981..1295633 Beijerinckia indica subsp. indica ATCC 9039 6200322 YP_001832249.1 CDS Bind_1118 NC_010581.1 1295710 1296579 R PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: ret:RHE_PF00140 hypothetical protein; hypothetical protein complement(1295710..1296579) Beijerinckia indica subsp. indica ATCC 9039 6201023 YP_001832250.1 CDS Bind_1119 NC_010581.1 1296576 1297151 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: aba:Acid345_4416 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein complement(1296576..1297151) Beijerinckia indica subsp. indica ATCC 9039 6198487 YP_001832251.1 CDS Bind_1120 NC_010581.1 1297291 1297680 R KEGG: nha:Nham_3496 hypothetical protein; hypothetical protein complement(1297291..1297680) Beijerinckia indica subsp. indica ATCC 9039 6198227 YP_001832252.1 CDS Bind_1121 NC_010581.1 1298118 1299140 D PFAM: O-methyltransferase family 2; regulatory protein ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_4339 regulatory protein; ArsR family transcriptional regulator 1298118..1299140 Beijerinckia indica subsp. indica ATCC 9039 6200694 YP_001832253.1 CDS Bind_1122 NC_010581.1 1299137 1300066 D KEGG: xau:Xaut_2831 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1299137..1300066 Beijerinckia indica subsp. indica ATCC 9039 6201165 YP_001832254.1 CDS metH NC_010581.1 1300067 1303807 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 1300067..1303807 Beijerinckia indica subsp. indica ATCC 9039 6198600 YP_001832255.1 CDS Bind_1124 NC_010581.1 1303813 1304235 D PFAM: protein of unknown function UPF0047; KEGG: bmu:Bmul_5223 protein of unknown function UPF0047; hypothetical protein 1303813..1304235 Beijerinckia indica subsp. indica ATCC 9039 6199347 YP_001832256.1 CDS Bind_1125 NC_010581.1 1304280 1305863 R KEGG: hau:Haur_0109 hypothetical protein; hypothetical protein complement(1304280..1305863) Beijerinckia indica subsp. indica ATCC 9039 6198469 YP_001832257.1 CDS Bind_1126 NC_010581.1 1306106 1306897 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B4504 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1306106..1306897 Beijerinckia indica subsp. indica ATCC 9039 6200913 YP_001832258.1 CDS Bind_1127 NC_010581.1 1306947 1307198 R KEGG: xau:Xaut_0133 hypothetical protein; hypothetical protein complement(1306947..1307198) Beijerinckia indica subsp. indica ATCC 9039 6198792 YP_001832259.1 CDS Bind_1128 NC_010581.1 1307573 1307920 R KEGG: xau:Xaut_2099 hypothetical protein; hypothetical protein complement(1307573..1307920) Beijerinckia indica subsp. indica ATCC 9039 6198335 YP_001832260.1 CDS Bind_1129 NC_010581.1 1308007 1308585 R KEGG: azo:azo2957 hypothetical protein; hypothetical protein complement(1308007..1308585) Beijerinckia indica subsp. indica ATCC 9039 6201000 YP_001832261.1 CDS Bind_1130 NC_010581.1 1308751 1309491 D PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain; molybdopterin binding domain-containing protein 1308751..1309491 Beijerinckia indica subsp. indica ATCC 9039 6199202 YP_001832262.1 CDS Bind_1131 NC_010581.1 1309502 1309981 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1309502..1309981 Beijerinckia indica subsp. indica ATCC 9039 6199831 YP_001832263.1 CDS Bind_1132 NC_010581.1 1310683 1311099 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator complement(1310683..1311099) Beijerinckia indica subsp. indica ATCC 9039 6201301 YP_001832264.1 CDS Bind_1133 NC_010581.1 1311305 1312522 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1311305..1312522) Beijerinckia indica subsp. indica ATCC 9039 6200511 YP_001832265.1 CDS Bind_1134 NC_010581.1 1312893 1313654 R PFAM: metallophosphoesterase; KEGG: nha:Nham_3024 metallophosphoesterase; metallophosphoesterase complement(1312893..1313654) Beijerinckia indica subsp. indica ATCC 9039 6201144 YP_001832266.1 CDS Bind_1135 NC_010581.1 1314275 1316512 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(1314275..1316512) Beijerinckia indica subsp. indica ATCC 9039 6200884 YP_001832267.1 CDS Bind_1136 NC_010581.1 1316769 1317665 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_3105 methyltransferase type 11; type 11 methyltransferase complement(1316769..1317665) Beijerinckia indica subsp. indica ATCC 9039 6201800 YP_001832268.1 CDS Bind_1137 NC_010581.1 1317969 1319399 D TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: zmo:ZMO0113 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 1317969..1319399 Beijerinckia indica subsp. indica ATCC 9039 6200723 YP_001832269.1 CDS Bind_1138 NC_010581.1 1319396 1319992 D TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 1319396..1319992 Beijerinckia indica subsp. indica ATCC 9039 6201049 YP_001832270.1 CDS Bind_1139 NC_010581.1 1319973 1320839 D PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV; class IV aminotransferase 1319973..1320839 Beijerinckia indica subsp. indica ATCC 9039 6198330 YP_001832271.1 CDS Bind_1140 NC_010581.1 1320843 1321637 D PFAM: phosphoribosyltransferase; KEGG: nwi:Nwi_0385 phosphoribosyltransferase; phosphoribosyltransferase 1320843..1321637 Beijerinckia indica subsp. indica ATCC 9039 6200340 YP_001832272.1 CDS Bind_1141 NC_010581.1 1321765 1322427 R KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(1321765..1322427) Beijerinckia indica subsp. indica ATCC 9039 6199552 YP_001832273.1 CDS Bind_1142 NC_010581.1 1322442 1323149 R KEGG: rpa:RPA4156 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(1322442..1323149) Beijerinckia indica subsp. indica ATCC 9039 6199495 YP_001832274.1 CDS Bind_1143 NC_010581.1 1323311 1323661 R hypothetical protein complement(1323311..1323661) Beijerinckia indica subsp. indica ATCC 9039 6201231 YP_001832275.1 CDS Bind_1144 NC_010581.1 1323900 1324901 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A1400 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 1323900..1324901 Beijerinckia indica subsp. indica ATCC 9039 6200499 YP_001832276.1 CDS Bind_1145 NC_010581.1 1325220 1326593 D KEGG: azc:AZC_0594 HupT protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1325220..1326593 Beijerinckia indica subsp. indica ATCC 9039 6200136 YP_001832277.1 CDS Bind_1146 NC_010581.1 1326787 1327788 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: xau:Xaut_0343 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1326787..1327788 Beijerinckia indica subsp. indica ATCC 9039 6200379 YP_001832278.1 CDS Bind_1147 NC_010581.1 1327796 1329262 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: azc:AZC_0596 HupV protein; nickel-dependent hydrogenase large subunit 1327796..1329262 Beijerinckia indica subsp. indica ATCC 9039 6200253 YP_001832279.1 CDS Bind_1148 NC_010581.1 1329272 1331611 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: azc:AZC_0597 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF 1329272..1331611 Beijerinckia indica subsp. indica ATCC 9039 6200487 YP_001832280.1 CDS Bind_1149 NC_010581.1 1331636 1332763 R KEGG: net:Neut_1100 hypothetical protein; hypothetical protein complement(1331636..1332763) Beijerinckia indica subsp. indica ATCC 9039 6200221 YP_001832281.1 CDS Bind_1150 NC_010581.1 1333335 1334411 D KEGG: azc:AZC_0598 Ni-Fe hydrogenase small subunit protein; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 1333335..1334411 Beijerinckia indica subsp. indica ATCC 9039 6201680 YP_001832282.1 CDS Bind_1151 NC_010581.1 1334411 1336228 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: azc:AZC_0599 hydrogenase large subunit protein; nickel-dependent hydrogenase large subunit 1334411..1336228 Beijerinckia indica subsp. indica ATCC 9039 6198504 YP_001832283.1 CDS Bind_1152 NC_010581.1 1336239 1337003 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: azc:AZC_0600 HupC protein; Ni/Fe-hydrogenase, b-type cytochrome subunit 1336239..1337003 Beijerinckia indica subsp. indica ATCC 9039 6201683 YP_001832284.1 CDS Bind_1153 NC_010581.1 1337225 1337881 D TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: azc:AZC_0601 hydrogen uptake protein; hydrogenase expression/formation protein 1337225..1337881 Beijerinckia indica subsp. indica ATCC 9039 6200398 YP_001832285.1 CDS Bind_1154 NC_010581.1 1337888 1338226 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: xau:Xaut_2177 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1337888..1338226 Beijerinckia indica subsp. indica ATCC 9039 6201041 YP_001832286.1 CDS Bind_1155 NC_010581.1 1338226 1338621 D PFAM: hydrogenase-1 expression HyaE; KEGG: azc:AZC_0603 hydrogenase expression/formation protein; hydrogenase-1 expression HyaE 1338226..1338621 Beijerinckia indica subsp. indica ATCC 9039 6200218 YP_001832287.1 CDS Bind_1156 NC_010581.1 1338631 1339518 D PFAM: HupH hydrogenase expression protein; KEGG: xau:Xaut_2179 HupH hydrogenase expression protein; HupH hydrogenase expression protein 1338631..1339518 Beijerinckia indica subsp. indica ATCC 9039 6200796 YP_001832288.1 CDS Bind_1157 NC_010581.1 1339515 1340402 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: xau:Xaut_2180 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1339515..1340402 Beijerinckia indica subsp. indica ATCC 9039 6201128 YP_001832289.1 CDS Bind_1158 NC_010581.1 1340399 1341388 D KEGG: xau:Xaut_2181 putative hydrogenase expression/formation protein HupK; putative hydrogenase expression/formation protein HupK 1340399..1341388 Beijerinckia indica subsp. indica ATCC 9039 6201332 YP_001832290.1 CDS Bind_1159 NC_010581.1 1341394 1341735 D TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: xau:Xaut_2182 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1341394..1341735 Beijerinckia indica subsp. indica ATCC 9039 6201294 YP_001832291.1 CDS Bind_1160 NC_010581.1 1341735 1342676 D TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: azc:AZC_0608 hydrogenase accessory protein; hydrogenase nickel incorporation protein HypB 1341735..1342676 Beijerinckia indica subsp. indica ATCC 9039 6201686 YP_001832292.1 CDS Bind_1161 NC_010581.1 1342683 1344173 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_2184 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 1342683..1344173 Beijerinckia indica subsp. indica ATCC 9039 6199884 YP_001832293.1 CDS Bind_1162 NC_010581.1 1344185 1344499 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: azc:AZC_0610 hydrogenase expression/formation protein; hydrogenase assembly chaperone HypC/HupF 1344185..1344499 Beijerinckia indica subsp. indica ATCC 9039 6199949 YP_001832294.1 CDS Bind_1163 NC_010581.1 1344508 1345629 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: azc:AZC_0611 hydrogenase formation protein; hydrogenase expression/formation protein HypD 1344508..1345629 Beijerinckia indica subsp. indica ATCC 9039 6201855 YP_001832295.1 CDS Bind_1164 NC_010581.1 1345626 1346684 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: azc:AZC_0612 hydrogenase expression/formation protein; hydrogenase expression/formation protein HypE 1345626..1346684 Beijerinckia indica subsp. indica ATCC 9039 6199231 YP_001832296.1 CDS Bind_1165 NC_010581.1 1346756 1347862 R PFAM: phosphoesterase; KEGG: aba:Acid345_1521 phosphoesterase; phosphoesterase complement(1346756..1347862) Beijerinckia indica subsp. indica ATCC 9039 6201131 YP_001832297.1 CDS Bind_1166 NC_010581.1 1347999 1350296 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: zmo:ZMO1807 TonB-dependent receptor; TonB-dependent receptor complement(1347999..1350296) Beijerinckia indica subsp. indica ATCC 9039 6198133 YP_001832298.1 CDS Bind_1167 NC_010581.1 1350539 1351606 D KEGG: nha:Nham_1869 hypothetical protein; hypothetical protein 1350539..1351606 Beijerinckia indica subsp. indica ATCC 9039 6199556 YP_001832299.1 CDS Bind_1168 NC_010581.1 1351669 1354785 R PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; acriflavin resistance protein complement(1351669..1354785) Beijerinckia indica subsp. indica ATCC 9039 6200314 YP_001832300.1 CDS Bind_1169 NC_010581.1 1354839 1356008 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1596 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1354839..1356008) Beijerinckia indica subsp. indica ATCC 9039 6200210 YP_001832301.1 CDS Bind_1170 NC_010581.1 1356309 1356995 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mca:MCA0263 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase complement(1356309..1356995) Beijerinckia indica subsp. indica ATCC 9039 6198709 YP_001832302.1 CDS Bind_1171 NC_010581.1 1357110 1357451 R TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: oan:Oant_0542 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit complement(1357110..1357451) Beijerinckia indica subsp. indica ATCC 9039 6200980 YP_001832303.1 CDS Bind_1172 NC_010581.1 1357518 1358873 D KEGG: cak:Caul_5093 monooxygenase, NtaA/SnaA/SoxA family; NtaA/SnaA/SoxA family monooxygenase 1357518..1358873 Beijerinckia indica subsp. indica ATCC 9039 6200968 YP_001832304.1 CDS Bind_1173 NC_010581.1 1358906 1359439 R KEGG: mex:Mext_4307 hypothetical protein; hypothetical protein complement(1358906..1359439) Beijerinckia indica subsp. indica ATCC 9039 6200177 YP_001832305.1 CDS Bind_1174 NC_010581.1 1359681 1360352 R KEGG: ajs:Ajs_4230 metal dependent phosphohydrolase, HD region; metal dependent phosphohydrolase, HD region complement(1359681..1360352) Beijerinckia indica subsp. indica ATCC 9039 6201333 YP_001832306.1 CDS Bind_1175 NC_010581.1 1360846 1362570 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mca:MCA0262 ATPase, AAA family; ATPase central domain-containing protein 1360846..1362570 Beijerinckia indica subsp. indica ATCC 9039 6199246 YP_001832307.1 CDS Bind_1176 NC_010581.1 1362656 1363279 R KEGG: pla:Plav_0747 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(1362656..1363279) Beijerinckia indica subsp. indica ATCC 9039 6200563 YP_001832308.1 CDS Bind_1177 NC_010581.1 1363316 1364515 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gur:Gura_0984 major facilitator superfamily MFS_1; major facilitator transporter complement(1363316..1364515) Beijerinckia indica subsp. indica ATCC 9039 6199825 YP_001832309.1 CDS Bind_1178 NC_010581.1 1364669 1366186 D PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: rle:pRL110232 putative transmembrane cyclic nucleotide-binding ion channel; cyclic nucleotide-regulated small mechanosensitive ion channel 1364669..1366186 Beijerinckia indica subsp. indica ATCC 9039 6200088 YP_001832310.1 CDS Bind_1179 NC_010581.1 1366208 1366873 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rpc:RPC_0206 heme exporter protein CcmB; heme exporter protein CcmB complement(1366208..1366873) Beijerinckia indica subsp. indica ATCC 9039 6201138 YP_001832311.1 CDS Bind_1180 NC_010581.1 1366894 1367511 R KEGG: rpa:RPA0203 heme exporter protein A (heme ABC transporter ATP-binding protein), cytochrome c biogenesis; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA complement(1366894..1367511) Beijerinckia indica subsp. indica ATCC 9039 6198389 YP_001832312.1 CDS Bind_1181 NC_010581.1 1367750 1370479 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1367750..1370479 Beijerinckia indica subsp. indica ATCC 9039 6200326 YP_001832313.1 CDS Bind_1182 NC_010581.1 1370623 1371732 D KEGG: bbt:BBta_0340 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1370623..1371732 Beijerinckia indica subsp. indica ATCC 9039 6201168 YP_001832314.1 CDS Bind_1183 NC_010581.1 1371964 1374237 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor; TonB-dependent siderophore receptor 1371964..1374237 Beijerinckia indica subsp. indica ATCC 9039 6198217 YP_001832315.1 CDS Bind_1184 NC_010581.1 1374333 1374773 R hypothetical protein complement(1374333..1374773) Beijerinckia indica subsp. indica ATCC 9039 6200477 YP_001832316.1 CDS Bind_1185 NC_010581.1 1375247 1375489 R KEGG: bpm:BURPS1710b_A1082 200 kDa antigen p200, putative; hypothetical protein complement(1375247..1375489) Beijerinckia indica subsp. indica ATCC 9039 6199712 YP_001832317.1 CDS Bind_1186 NC_010581.1 1376088 1377122 D TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: rpc:RPC_0237 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1376088..1377122 Beijerinckia indica subsp. indica ATCC 9039 6199338 YP_001832318.1 CDS Bind_1187 NC_010581.1 1377232 1377960 R PFAM: carbonic anhydrase; KEGG: azc:AZC_2766 carbonic anhydrase; carbonate dehydratase complement(1377232..1377960) Beijerinckia indica subsp. indica ATCC 9039 6200486 YP_001832319.1 CDS Bind_1188 NC_010581.1 1378082 1378960 D PFAM: HpcH/HpaI aldolase; KEGG: azc:AZC_3736 citrate lyase beta subunit; citryl-CoA lyase 1378082..1378960 Beijerinckia indica subsp. indica ATCC 9039 6200632 YP_001832320.1 CDS Bind_1189 NC_010581.1 1379427 1380761 D KEGG: rpd:RPD_0468 hypothetical protein; hypothetical protein 1379427..1380761 Beijerinckia indica subsp. indica ATCC 9039 6200390 YP_001832321.1 CDS Bind_1190 NC_010581.1 1380899 1382380 D PFAM: HemY domain protein; KEGG: mex:Mext_0735 HemY domain protein; HemY domain-containing protein 1380899..1382380 Beijerinckia indica subsp. indica ATCC 9039 6198500 YP_001832322.1 CDS Bind_1191 NC_010581.1 1382660 1383157 D KEGG: rru:Rru_A2704 hypothetical protein; hypothetical protein 1382660..1383157 Beijerinckia indica subsp. indica ATCC 9039 6199751 YP_001832323.1 CDS Bind_1192 NC_010581.1 1383306 1384718 R KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(1383306..1384718) Beijerinckia indica subsp. indica ATCC 9039 6200567 YP_001832324.1 CDS Bind_1193 NC_010581.1 1385045 1386622 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3; peptide chain release factor 3 complement(1385045..1386622) Beijerinckia indica subsp. indica ATCC 9039 6199862 YP_001832325.1 CDS Bind_1194 NC_010581.1 1386867 1387703 D KEGG: mlo:mll1046 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1386867..1387703 Beijerinckia indica subsp. indica ATCC 9039 6200132 YP_001832326.1 CDS Bind_1195 NC_010581.1 1387795 1389267 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: shn:Shewana3_3225 peptidase S10, serine carboxypeptidase; peptidase S10 serine carboxypeptidase complement(1387795..1389267) Beijerinckia indica subsp. indica ATCC 9039 6198493 YP_001832327.1 CDS Bind_1196 NC_010581.1 1389991 1391370 D PFAM: OmpA/MotB domain protein; transport-associated; KEGG: bbt:BBta_0753 putative outer membrane protein with OmpA domain; OmpA/MotB domain-containing protein 1389991..1391370 Beijerinckia indica subsp. indica ATCC 9039 6200291 YP_001832328.1 CDS Bind_1197 NC_010581.1 1391382 1392011 D KEGG: bra:BRADO2721 hypothetical protein; putative membrane protein; putative TolA family protein; hypothetical protein 1391382..1392011 Beijerinckia indica subsp. indica ATCC 9039 6201854 YP_001832329.1 CDS Bind_1198 NC_010581.1 1392221 1393204 R PFAM: aldo/keto reductase; KEGG: sil:SPOA0345 oxidoreductase, aldo/keto reductase family; aldo/keto reductase complement(1392221..1393204) Beijerinckia indica subsp. indica ATCC 9039 6200739 YP_001832330.1 CDS Bind_1199 NC_010581.1 1393267 1394208 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sil:SPOA0344 transcriptional regulator, LysR family; LysR family transcriptional regulator 1393267..1394208 Beijerinckia indica subsp. indica ATCC 9039 6200000 YP_001832331.1 CDS Bind_1200 NC_010581.1 1394276 1394743 R hypothetical protein complement(1394276..1394743) Beijerinckia indica subsp. indica ATCC 9039 6199897 YP_001832332.1 CDS Bind_1201 NC_010581.1 1394861 1396498 R PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone complement(1394861..1396498) Beijerinckia indica subsp. indica ATCC 9039 6199866 YP_001832333.1 CDS Bind_1202 NC_010581.1 1396569 1397696 R PFAM: Patatin; KEGG: rru:Rru_A1038 patatin; patatin complement(1396569..1397696) Beijerinckia indica subsp. indica ATCC 9039 6201771 YP_001832334.1 CDS Bind_1203 NC_010581.1 1398228 1398458 R PFAM: protein of unknown function DUF378; KEGG: rsq:Rsph17025_0607 protein of unknown function DUF378; hypothetical protein complement(1398228..1398458) Beijerinckia indica subsp. indica ATCC 9039 6200423 YP_001832335.1 CDS Bind_1204 NC_010581.1 1398736 1399509 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1398736..1399509) Beijerinckia indica subsp. indica ATCC 9039 6201581 YP_001832336.1 CDS Bind_1205 NC_010581.1 1399768 1400250 R PFAM: RDD domain containing protein; KEGG: sme:SMc01765 hypothetical protein; RDD domain-containing protein complement(1399768..1400250) Beijerinckia indica subsp. indica ATCC 9039 6200422 YP_001832337.1 CDS Bind_1206 NC_010581.1 1400426 1401109 D PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mex:Mext_0840 peptidase M15D VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 1400426..1401109 Beijerinckia indica subsp. indica ATCC 9039 6199927 YP_001832338.1 CDS Bind_1207 NC_010581.1 1401114 1402670 R KEGG: rrs:RoseRS_3992 hypothetical protein; hypothetical protein complement(1401114..1402670) Beijerinckia indica subsp. indica ATCC 9039 6198646 YP_001832339.1 CDS Bind_1208 NC_010581.1 1402812 1403879 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1402812..1403879) Beijerinckia indica subsp. indica ATCC 9039 6201348 YP_001832340.1 CDS Bind_1209 NC_010581.1 1404033 1404749 R PFAM: TENA/THI-4 domain protein; KEGG: gdi:GDI2186 thiaminase-2 protein; TenA family transcription regulator complement(1404033..1404749) Beijerinckia indica subsp. indica ATCC 9039 6198134 YP_001832341.1 CDS Bind_1210 NC_010581.1 1405185 1406156 D PFAM: Glutathione S-transferase domain; KEGG: syn:slr0605 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 1405185..1406156 Beijerinckia indica subsp. indica ATCC 9039 6198284 YP_001832342.1 CDS Bind_1211 NC_010581.1 1406168 1406476 R KEGG: rpc:RPC_3310 hypothetical protein; hypothetical protein complement(1406168..1406476) Beijerinckia indica subsp. indica ATCC 9039 6198383 YP_001832343.1 CDS Bind_1212 NC_010581.1 1406632 1407003 D PFAM: response regulator receiver; KEGG: mex:Mext_0966 response regulator receiver; response regulator receiver protein 1406632..1407003 Beijerinckia indica subsp. indica ATCC 9039 6198167 YP_001832344.1 CDS Bind_1213 NC_010581.1 1407058 1408431 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rpa:RPA3132 response regulator PleD; response regulator receiver modulated diguanylate cyclase 1407058..1408431 Beijerinckia indica subsp. indica ATCC 9039 6200075 YP_001832345.1 CDS Bind_1214 NC_010581.1 1408852 1410159 R PFAM: beta-lactamase; KEGG: bra:BRADO1130 putative penicillin binding protein; beta-lactamase complement(1408852..1410159) Beijerinckia indica subsp. indica ATCC 9039 6200885 YP_001832346.1 CDS Bind_1215 NC_010581.1 1410192 1412267 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(1410192..1412267) Beijerinckia indica subsp. indica ATCC 9039 6200395 YP_001832347.1 CDS Bind_1216 NC_010581.1 1412509 1413918 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I; glutamine synthetase, type I complement(1412509..1413918) Beijerinckia indica subsp. indica ATCC 9039 6200237 YP_001832348.1 CDS Bind_1217 NC_010581.1 1413976 1414314 R PFAM: nitrogen regulatory protein P-II; KEGG: mlo:mll0345 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(1413976..1414314) Beijerinckia indica subsp. indica ATCC 9039 6198234 YP_001832349.1 CDS Bind_1218 NC_010581.1 1414743 1415135 R KEGG: sus:Acid_7934 hypothetical protein; hypothetical protein complement(1414743..1415135) Beijerinckia indica subsp. indica ATCC 9039 6201047 YP_001832350.1 CDS Bind_1219 NC_010581.1 1415588 1416442 R PFAM: Rhodanese domain protein; KEGG: xau:Xaut_4678 rhodanese domain protein; rhodanese domain-containing protein complement(1415588..1416442) Beijerinckia indica subsp. indica ATCC 9039 6201343 YP_001832351.1 CDS Bind_1220 NC_010581.1 1416472 1417530 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: xau:Xaut_4677 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(1416472..1417530) Beijerinckia indica subsp. indica ATCC 9039 6198275 YP_001832352.1 CDS Bind_1221 NC_010581.1 1417764 1418330 D PFAM: Cold-shock protein DNA-binding; KEGG: noc:Noc_2438 sigma 54 modulation protein/ribosomal protein S30EA; DNA-binding cold-shock protein 1417764..1418330 Beijerinckia indica subsp. indica ATCC 9039 6200044 YP_001832353.1 CDS Bind_1222 NC_010581.1 1419030 1419806 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc01175 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1419030..1419806 Beijerinckia indica subsp. indica ATCC 9039 6200354 YP_001832354.1 CDS Bind_1223 NC_010581.1 1419808 1420131 R KEGG: xau:Xaut_3391 hypothetical protein; hypothetical protein complement(1419808..1420131) Beijerinckia indica subsp. indica ATCC 9039 6201065 YP_001832355.1 CDS Bind_1224 NC_010581.1 1420253 1421602 R KEGG: fre:Franean1_4104 putative monooxygenase, NtaA/SnaA/SoxA family; NtaA/SnaA/SoxA family monooxygenase complement(1420253..1421602) Beijerinckia indica subsp. indica ATCC 9039 6201146 YP_001832356.1 CDS glyA NC_010581.1 1421919 1423220 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1421919..1423220 Beijerinckia indica subsp. indica ATCC 9039 6198213 YP_001832357.1 CDS Bind_1226 NC_010581.1 1423365 1424570 D TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: rpa:RPA2726 putative riboflavin-specific deaminase / reductase; riboflavin biosynthesis protein RibD 1423365..1424570 Beijerinckia indica subsp. indica ATCC 9039 6198209 YP_001832358.1 CDS Bind_1227 NC_010581.1 1424573 1425181 D TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: rpb:RPB_2637 riboflavin synthase subunit alpha; riboflavin synthase subunit alpha 1424573..1425181 Beijerinckia indica subsp. indica ATCC 9039 6201784 YP_001832359.1 CDS Bind_1228 NC_010581.1 1425234 1426874 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: cak:Caul_3138 Na+/H+ antiporter; Na+/H+ antiporter 1425234..1426874 Beijerinckia indica subsp. indica ATCC 9039 6201816 YP_001832360.1 CDS Bind_1229 NC_010581.1 1426904 1429093 R PFAM: Amylo-alpha-16-glucosidase; KEGG: rpc:RPC_3211 amylo-alpha-1,6-glucosidase; amylo-alpha-16-glucosidase complement(1426904..1429093) Beijerinckia indica subsp. indica ATCC 9039 6201831 YP_001832361.1 CDS Bind_1230 NC_010581.1 1429086 1430210 R PFAM: glycosyl transferase group 1; KEGG: bja:bll5217 probable glycosyl transferase; group 1 glycosyl transferase complement(1429086..1430210) Beijerinckia indica subsp. indica ATCC 9039 6199702 YP_001832362.1 CDS Bind_1231 NC_010581.1 1430390 1432243 R KEGG: bbt:BBta_1839 cell division protein FtsH (ATP-dependent zinc-metallo protease); TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(1430390..1432243) Beijerinckia indica subsp. indica ATCC 9039 6199846 YP_001832363.1 CDS Bind_1232 NC_010581.1 1432419 1434308 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mag:amb1849 probable cysteine desulfurase 1; SufS subfamily cysteine desulfurase complement(1432419..1434308) Beijerinckia indica subsp. indica ATCC 9039 6200904 YP_001832364.1 CDS Bind_1233 NC_010581.1 1434289 1435212 R KEGG: chu:CHU_1814 hypothetical protein; hypothetical protein complement(1434289..1435212) Beijerinckia indica subsp. indica ATCC 9039 6199693 YP_001832365.1 CDS Bind_1234 NC_010581.1 1435733 1437034 D PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3517 major facilitator superfamily MFS_1; major facilitator transporter 1435733..1437034 Beijerinckia indica subsp. indica ATCC 9039 6199822 YP_001832366.1 CDS Bind_1235 NC_010581.1 1437027 1437461 D PFAM: regulatory protein MarR; KEGG: rru:Rru_A3519 transcriptional regulator, MarR family; MarR family transcriptional regulator 1437027..1437461 Beijerinckia indica subsp. indica ATCC 9039 6200220 YP_001832367.1 CDS Bind_1236 NC_010581.1 1437466 1437741 R hypothetical protein complement(1437466..1437741) Beijerinckia indica subsp. indica ATCC 9039 6199024 YP_001832368.1 CDS Bind_1237 NC_010581.1 1438168 1438485 R KEGG: mag:amb2048 hypothetical protein; hypothetical protein complement(1438168..1438485) Beijerinckia indica subsp. indica ATCC 9039 6200542 YP_001832369.1 CDS Bind_1238 NC_010581.1 1438587 1440236 R KEGG: azc:AZC_2385 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(1438587..1440236) Beijerinckia indica subsp. indica ATCC 9039 6201105 YP_001832370.1 CDS Bind_1239 NC_010581.1 1440540 1442366 D PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: cak:Caul_4668 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1440540..1442366 Beijerinckia indica subsp. indica ATCC 9039 6199924 YP_001832371.1 CDS Bind_1240 NC_010581.1 1442575 1443174 D PFAM: NnrUfamily protein; KEGG: gdi:GDI0566 putative nitrate reductase protein; NnrU family protein 1442575..1443174 Beijerinckia indica subsp. indica ATCC 9039 6201806 YP_001832372.1 CDS Bind_1241 NC_010581.1 1443227 1444558 R KEGG: nha:Nham_1076 hypothetical protein; hypothetical protein complement(1443227..1444558) Beijerinckia indica subsp. indica ATCC 9039 6201701 YP_001832373.1 CDS Bind_1242 NC_010581.1 1444651 1445985 R catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase complement(1444651..1445985) Beijerinckia indica subsp. indica ATCC 9039 6198258 YP_001832374.1 CDS Bind_1243 NC_010581.1 1446452 1446901 D KEGG: cak:Caul_1252 hypothetical protein; hypothetical protein 1446452..1446901 Beijerinckia indica subsp. indica ATCC 9039 6198488 YP_001832375.1 CDS Bind_1244 NC_010581.1 1447034 1447414 D hypothetical protein 1447034..1447414 Beijerinckia indica subsp. indica ATCC 9039 6200665 YP_001832376.1 CDS Bind_1245 NC_010581.1 1447583 1448599 D TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1621 quinone oxidoreductase putative PIG3; PIG3 family NAD(P)H quinone oxidoreductase 1447583..1448599 Beijerinckia indica subsp. indica ATCC 9039 6200854 YP_001832377.1 CDS Bind_1246 NC_010581.1 1448696 1449694 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: prw:PsycPRwf_0720 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1448696..1449694) Beijerinckia indica subsp. indica ATCC 9039 6198126 YP_001832378.1 CDS Bind_1247 NC_010581.1 1449809 1450381 D PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_5042 isochorismatase hydrolase; isochorismatase hydrolase 1449809..1450381 Beijerinckia indica subsp. indica ATCC 9039 6198742 YP_001832379.1 CDS Bind_1249 NC_010581.1 1450762 1452870 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sen:SACE_2844 TPR repeat; hypothetical protein complement(1450762..1452870) Beijerinckia indica subsp. indica ATCC 9039 6200017 YP_001832380.1 CDS Bind_1250 NC_010581.1 1453026 1453475 R hypothetical protein complement(1453026..1453475) Beijerinckia indica subsp. indica ATCC 9039 6199798 YP_001832381.1 CDS Bind_1251 NC_010581.1 1454107 1454268 R hypothetical protein complement(1454107..1454268) Beijerinckia indica subsp. indica ATCC 9039 6198870 YP_001832382.1 CDS Bind_1252 NC_010581.1 1454452 1454847 D PFAM: Domain of unknown function DUF1863; KEGG: cbf:CLI_1847 hypothetical protein; hypothetical protein 1454452..1454847 Beijerinckia indica subsp. indica ATCC 9039 6201802 YP_001832383.1 CDS Bind_1253 NC_010581.1 1455057 1456067 R PFAM: alpha/beta hydrolase fold; KEGG: pnu:Pnuc_1320 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1455057..1456067) Beijerinckia indica subsp. indica ATCC 9039 6199569 YP_001832384.1 CDS Bind_1254 NC_010581.1 1456159 1456614 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: xau:Xaut_2944 protein of unknown function DUF306 MetA and HslJ; hypothetical protein 1456159..1456614 Beijerinckia indica subsp. indica ATCC 9039 6199318 YP_001832385.1 CDS Bind_1255 NC_010581.1 1456717 1456917 D hypothetical protein 1456717..1456917 Beijerinckia indica subsp. indica ATCC 9039 6201005 YP_001832386.1 CDS rpsD NC_010581.1 1456889 1457506 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1456889..1457506 Beijerinckia indica subsp. indica ATCC 9039 6200098 YP_001832387.1 CDS Bind_1257 NC_010581.1 1457708 1458448 R PFAM: regulatory protein TetR; KEGG: mex:Mext_3768 putative transcriptional regulator, TetR family; regulatory protein TetR complement(1457708..1458448) Beijerinckia indica subsp. indica ATCC 9039 6200232 YP_001832388.1 CDS Bind_1258 NC_010581.1 1458776 1459606 R KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase complement(1458776..1459606) Beijerinckia indica subsp. indica ATCC 9039 6199946 YP_001832389.1 CDS Bind_1259 NC_010581.1 1459804 1460304 R PFAM: Protein of unknown function DUF1790; KEGG: mex:Mext_3770 protein of unknown function DUF1790; hypothetical protein complement(1459804..1460304) Beijerinckia indica subsp. indica ATCC 9039 6199610 YP_001832390.1 CDS Bind_1260 NC_010581.1 1460801 1461571 D PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 protein of unknown function DUF45; hypothetical protein 1460801..1461571 Beijerinckia indica subsp. indica ATCC 9039 6198685 YP_001832391.1 CDS Bind_1261 NC_010581.1 1461585 1464062 R KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB complement(1461585..1464062) Beijerinckia indica subsp. indica ATCC 9039 6201592 YP_001832392.1 CDS Bind_1262 NC_010581.1 1464889 1466820 D PFAM: K potassium transporter; KEGG: bja:blr3803 potassium uptake protein; K potassium transporter 1464889..1466820 Beijerinckia indica subsp. indica ATCC 9039 6200065 YP_001832393.1 CDS Bind_1263 NC_010581.1 1466902 1469661 D TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: bbt:BBta_7642 DNA mismatch repair protein; DNA mismatch repair protein MutS 1466902..1469661 Beijerinckia indica subsp. indica ATCC 9039 6200305 YP_001832394.1 CDS Bind_1264 NC_010581.1 1469897 1471375 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: gdi:GDI2957 putative sulfate transporter; sulfate transporter 1469897..1471375 Beijerinckia indica subsp. indica ATCC 9039 6198619 YP_001832395.1 CDS Bind_1265 NC_010581.1 1471482 1471787 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gfo:GFO_1743 carboxymuconolactone decarboxylase family protein-possibly antioxidant defence related; alkylhydroperoxidase 1471482..1471787 Beijerinckia indica subsp. indica ATCC 9039 6198827 YP_001832396.1 CDS hrcA NC_010581.1 1471789 1472889 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1471789..1472889) Beijerinckia indica subsp. indica ATCC 9039 6199939 YP_001832397.1 CDS Bind_1267 NC_010581.1 1472954 1473358 R PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator; response regulator receiver/SARP domain-containing protein complement(1472954..1473358) Beijerinckia indica subsp. indica ATCC 9039 6200064 YP_001832398.1 CDS Bind_1268 NC_010581.1 1473658 1475043 R KEGG: gdi:GDI0705 hypothetical protein; hypothetical protein complement(1473658..1475043) Beijerinckia indica subsp. indica ATCC 9039 6199523 YP_001832399.1 CDS Bind_1269 NC_010581.1 1475391 1476980 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(1475391..1476980) Beijerinckia indica subsp. indica ATCC 9039 6200198 YP_001832400.1 CDS Bind_1270 NC_010581.1 1477189 1478361 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(1477189..1478361) Beijerinckia indica subsp. indica ATCC 9039 6199790 YP_001832401.1 CDS Bind_1271 NC_010581.1 1478659 1479777 D PFAM: Catalase domain protein; KEGG: mex:Mext_0230 catalase domain protein; catalase domain-containing protein 1478659..1479777 Beijerinckia indica subsp. indica ATCC 9039 6201810 YP_001832402.1 CDS Bind_1272 NC_010581.1 1479774 1480346 D PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561; cytochrome B561 1479774..1480346 Beijerinckia indica subsp. indica ATCC 9039 6198243 YP_001832403.1 CDS Bind_1273 NC_010581.1 1480481 1481761 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1480481..1481761 Beijerinckia indica subsp. indica ATCC 9039 6199647 YP_001832404.1 CDS Bind_1274 NC_010581.1 1482096 1482440 D PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain protein; SWIB/MDM2 domain-containing protein 1482096..1482440 Beijerinckia indica subsp. indica ATCC 9039 6200240 YP_001832405.1 CDS Bind_1275 NC_010581.1 1482640 1483587 D PFAM: aldo/keto reductase; KEGG: afw:Anae109_1681 aldo/keto reductase; aldo/keto reductase 1482640..1483587 Beijerinckia indica subsp. indica ATCC 9039 6199919 YP_001832406.1 CDS Bind_1276 NC_010581.1 1483617 1484354 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_564 short chain dehydrogenase; short chain dehydrogenase complement(1483617..1484354) Beijerinckia indica subsp. indica ATCC 9039 6199975 YP_001832407.1 CDS Bind_1277 NC_010581.1 1484492 1485391 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH00344 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1484492..1485391 Beijerinckia indica subsp. indica ATCC 9039 6201651 YP_001832408.1 CDS Bind_1278 NC_010581.1 1485401 1486096 R PFAM: Rhodanese domain protein; regulatory protein ArsR; KEGG: bps:BPSS2118 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(1485401..1486096) Beijerinckia indica subsp. indica ATCC 9039 6200248 YP_001832409.1 CDS Bind_1279 NC_010581.1 1486137 1486352 D KEGG: acr:Acry_3467 beta-lactamase domain protein; hypothetical protein 1486137..1486352 Beijerinckia indica subsp. indica ATCC 9039 6200579 YP_001832410.1 CDS Bind_1280 NC_010581.1 1486476 1486841 D KEGG: mes:Meso_2278 hypothetical protein; hypothetical protein 1486476..1486841 Beijerinckia indica subsp. indica ATCC 9039 6201129 YP_001832411.1 CDS Bind_1281 NC_010581.1 1487128 1488288 D KEGG: bur:Bcep18194_B0205 hypothetical protein; hypothetical protein 1487128..1488288 Beijerinckia indica subsp. indica ATCC 9039 6200306 YP_001832412.1 CDS Bind_1282 NC_010581.1 1488551 1488961 R PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_2128 thioesterase superfamily protein; thioesterase superfamily protein complement(1488551..1488961) Beijerinckia indica subsp. indica ATCC 9039 6200162 YP_001832413.1 CDS Bind_1283 NC_010581.1 1489141 1491204 R PFAM: protein of unknown function DUF255; KEGG: xau:Xaut_1832 protein of unknown function DUF255; hypothetical protein complement(1489141..1491204) Beijerinckia indica subsp. indica ATCC 9039 6201378 YP_001832414.1 CDS trmE NC_010581.1 1491469 1492824 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1491469..1492824 Beijerinckia indica subsp. indica ATCC 9039 6200966 YP_001832415.1 CDS Bind_1285 NC_010581.1 1492866 1494722 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1492866..1494722 Beijerinckia indica subsp. indica ATCC 9039 6201797 YP_001832416.1 CDS Bind_1286 NC_010581.1 1494719 1495384 D TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: xau:Xaut_1835 glucose inhibited division protein; methyltransferase GidB 1494719..1495384 Beijerinckia indica subsp. indica ATCC 9039 6199997 YP_001832417.1 CDS Bind_1287 NC_010581.1 1495467 1497059 D KEGG: xau:Xaut_1732 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1495467..1497059 Beijerinckia indica subsp. indica ATCC 9039 6198704 YP_001832418.1 CDS Bind_1288 NC_010581.1 1497166 1497453 D PFAM: protein of unknown function DUF74; KEGG: ter:Tery_3795 protein of unknown function DUF74; hypothetical protein 1497166..1497453 Beijerinckia indica subsp. indica ATCC 9039 6198866 YP_001832419.1 CDS Bind_1289 NC_010581.1 1497607 1497861 D KEGG: vei:Veis_4393 hypothetical protein; hypothetical protein 1497607..1497861 Beijerinckia indica subsp. indica ATCC 9039 6199380 YP_001832420.1 CDS gmk NC_010581.1 1497901 1498518 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1497901..1498518) Beijerinckia indica subsp. indica ATCC 9039 6200383 YP_001832421.1 CDS Bind_1291 NC_010581.1 1498699 1499583 R PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: xau:Xaut_3135 domain of unknown function DUF1732; hypothetical protein complement(1498699..1499583) Beijerinckia indica subsp. indica ATCC 9039 6199163 YP_001832422.1 CDS Bind_1292 NC_010581.1 1499580 1500215 R TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: xau:Xaut_2324 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase complement(1499580..1500215) Beijerinckia indica subsp. indica ATCC 9039 6200308 YP_001832423.1 CDS Bind_1293 NC_010581.1 1500266 1501333 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(1500266..1501333) Beijerinckia indica subsp. indica ATCC 9039 6201788 YP_001832424.1 CDS Bind_1294 NC_010581.1 1502079 1503011 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_3121 transcriptional regulator; LysR family transcriptional regulator 1502079..1503011 Beijerinckia indica subsp. indica ATCC 9039 6198640 YP_001832425.1 CDS Bind_1295 NC_010581.1 1503106 1503342 D hypothetical protein 1503106..1503342 Beijerinckia indica subsp. indica ATCC 9039 6200608 YP_001832426.1 CDS Bind_1296 NC_010581.1 1503802 1504350 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpa:RPA3050 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1503802..1504350 Beijerinckia indica subsp. indica ATCC 9039 6199032 YP_001832427.1 CDS Bind_1297 NC_010581.1 1504507 1505655 D PFAM: protein of unknown function UPF0118; KEGG: mes:Meso_1964 protein of unknown function UPF0118; hypothetical protein 1504507..1505655 Beijerinckia indica subsp. indica ATCC 9039 6201188 YP_001832428.1 CDS Bind_1298 NC_010581.1 1505657 1506355 D PFAM: Chromosomal replication initiator DnaA; KEGG: mex:Mext_2066 chromosomal replication initiator DnaA; chromosomal replication initiator DnaA 1505657..1506355 Beijerinckia indica subsp. indica ATCC 9039 6200235 YP_001832429.1 CDS Bind_1299 NC_010581.1 1506413 1506733 R KEGG: ccr:CC_1835 hypothetical protein; hypothetical protein complement(1506413..1506733) Beijerinckia indica subsp. indica ATCC 9039 6199993 YP_001832430.1 CDS Bind_1300 NC_010581.1 1507015 1508061 D PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A0896 hypothetical protein; hypothetical protein 1507015..1508061 Beijerinckia indica subsp. indica ATCC 9039 6199050 YP_001832431.1 CDS Bind_1301 NC_010581.1 1508191 1508880 D PFAM: protein of unknown function DUF938; KEGG: mca:MCA0911 hypothetical protein; hypothetical protein 1508191..1508880 Beijerinckia indica subsp. indica ATCC 9039 6198591 YP_001832432.1 CDS Bind_1302 NC_010581.1 1508999 1510432 R PFAM: Amidase; KEGG: cak:Caul_3620 amidase; amidase complement(1508999..1510432) Beijerinckia indica subsp. indica ATCC 9039 6198537 YP_001832433.1 CDS Bind_1304 NC_010581.1 1511463 1511990 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0323 putative glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1511463..1511990) Beijerinckia indica subsp. indica ATCC 9039 6199636 YP_001832434.1 CDS Bind_1305 NC_010581.1 1512031 1512528 R KEGG: gdi:GDI0324 hypothetical protein; hypothetical protein complement(1512031..1512528) Beijerinckia indica subsp. indica ATCC 9039 6198329 YP_001832435.1 CDS Bind_1306 NC_010581.1 1512998 1513624 D PFAM: cytochrome B561; KEGG: bpt:Bpet1668 cytochrome b561 family protein; cytochrome B561 1512998..1513624 Beijerinckia indica subsp. indica ATCC 9039 6198944 YP_001832436.1 CDS Bind_1307 NC_010581.1 1513647 1514342 D PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 protein of unknown function DUF540; hypothetical protein 1513647..1514342 Beijerinckia indica subsp. indica ATCC 9039 6200996 YP_001832437.1 CDS Bind_1308 NC_010581.1 1514435 1515445 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bbt:BBta_0224 hypothetical protein; NADH dehydrogenase (ubiquinone) complement(1514435..1515445) Beijerinckia indica subsp. indica ATCC 9039 6198881 YP_001832438.1 CDS Bind_1309 NC_010581.1 1517201 1517590 R hypothetical protein complement(1517201..1517590) Beijerinckia indica subsp. indica ATCC 9039 6201148 YP_001832439.1 CDS Bind_1310 NC_010581.1 1518055 1518777 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpt:Bpet3236 2-haloalkanoic acid dehalogenase; haloacid dehalogenase complement(1518055..1518777) Beijerinckia indica subsp. indica ATCC 9039 6199979 YP_001832440.1 CDS Bind_1311 NC_010581.1 1518822 1519205 D TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: rpd:RPD_3620 CrcB protein; CrcB protein 1518822..1519205 Beijerinckia indica subsp. indica ATCC 9039 6201389 YP_001832441.1 CDS Bind_1312 NC_010581.1 1519202 1520254 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bja:bll5366 putative ribosomal large subunit pseudouridine synthase C; RluA family pseudouridine synthase 1519202..1520254 Beijerinckia indica subsp. indica ATCC 9039 6201583 YP_001832442.1 CDS Bind_1313 NC_010581.1 1520241 1520939 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 1520241..1520939 Beijerinckia indica subsp. indica ATCC 9039 6199544 YP_001832443.1 CDS Bind_1314 NC_010581.1 1520975 1521796 D PFAM: ATP12 ATPase; KEGG: rpb:RPB_2337 ATP12 ATPase; ATP12 ATPase 1520975..1521796 Beijerinckia indica subsp. indica ATCC 9039 6199324 YP_001832444.1 CDS Bind_1315 NC_010581.1 1521809 1522330 D PFAM: glutathione peroxidase; KEGG: spe:Spro_2152 glutathione peroxidase; glutathione peroxidase 1521809..1522330 Beijerinckia indica subsp. indica ATCC 9039 6201236 YP_001832445.1 CDS Bind_1316 NC_010581.1 1522343 1522870 D PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_2212 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1522343..1522870 Beijerinckia indica subsp. indica ATCC 9039 6199243 YP_001832446.1 CDS Bind_1317 NC_010581.1 1522975 1524507 D PFAM: carboxyl transferase; KEGG: ret:RHE_CH02232 propionyl-CoA carboxylase beta chain protein; carboxyl transferase 1522975..1524507 Beijerinckia indica subsp. indica ATCC 9039 6199668 YP_001832447.1 CDS Bind_1318 NC_010581.1 1524581 1526587 D PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: azc:AZC_1774 propionyl-coenzyme A carboxylase alpha polypeptide; carbamoyl-phosphate synthase L chain ATP-binding 1524581..1526587 Beijerinckia indica subsp. indica ATCC 9039 6199593 YP_001832448.1 CDS Bind_1319 NC_010581.1 1527782 1529899 D KEGG: afm:AFUA_5G00480 exoinulinase InuD; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; levanase 1527782..1529899 Beijerinckia indica subsp. indica ATCC 9039 6200176 YP_001832449.1 CDS Bind_1320 NC_010581.1 1530227 1532422 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1530227..1532422) Beijerinckia indica subsp. indica ATCC 9039 6199792 YP_001832450.1 CDS panC NC_010581.1 1532597 1533451 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1532597..1533451 Beijerinckia indica subsp. indica ATCC 9039 6200249 YP_001832451.1 CDS Bind_1322 NC_010581.1 1533462 1533767 D PFAM: acylphosphatase; KEGG: nha:Nham_2164 acylphosphatase; acylphosphatase 1533462..1533767 Beijerinckia indica subsp. indica ATCC 9039 6200283 YP_001832452.1 CDS Bind_1323 NC_010581.1 1533994 1534875 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr2811 hypothetical protein; hypothetical protein complement(1533994..1534875) Beijerinckia indica subsp. indica ATCC 9039 6201228 YP_001832453.1 CDS Bind_1324 NC_010581.1 1535007 1535270 R hypothetical protein complement(1535007..1535270) Beijerinckia indica subsp. indica ATCC 9039 6200123 YP_001832454.1 CDS Bind_1325 NC_010581.1 1535462 1536277 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pla:Plav_2581 RNA methyltransferase, TrmH family, group 1; tRNA/rRNA methyltransferase SpoU 1535462..1536277 Beijerinckia indica subsp. indica ATCC 9039 6200920 YP_001832455.1 CDS Bind_1326 NC_010581.1 1536523 1537386 D KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 1536523..1537386 Beijerinckia indica subsp. indica ATCC 9039 6199823 YP_001832456.1 CDS Bind_1327 NC_010581.1 1537381 1538361 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: xau:Xaut_1843 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF complement(1537381..1538361) Beijerinckia indica subsp. indica ATCC 9039 6200185 YP_001832457.1 CDS Bind_1328 NC_010581.1 1538523 1539422 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nwi:Nwi_2539 HAD-superfamily subfamily IIA hydrolase; HAD family hydrolase complement(1538523..1539422) Beijerinckia indica subsp. indica ATCC 9039 6200959 YP_001832458.1 CDS Bind_1329 NC_010581.1 1539680 1540561 D KEGG: rpb:RPB_4107 hypothetical protein; hypothetical protein 1539680..1540561 Beijerinckia indica subsp. indica ATCC 9039 6199811 YP_001832459.1 CDS Bind_1330 NC_010581.1 1540866 1541204 D PFAM: Rhodanese domain protein; KEGG: bra:BRADO3192 putative sulfurtransferase (rhodanese); rhodanese domain-containing protein 1540866..1541204 Beijerinckia indica subsp. indica ATCC 9039 6200507 YP_001832460.1 CDS Bind_1331 NC_010581.1 1541345 1541914 D KEGG: scl:sce6240 hypothetical protein; hypothetical protein 1541345..1541914 Beijerinckia indica subsp. indica ATCC 9039 6200740 YP_001832461.1 CDS Bind_1332 NC_010581.1 1541951 1542637 R KEGG: amr:AM1_2247 hypothetical protein; anti-ECF sigma factor ChrR complement(1541951..1542637) Beijerinckia indica subsp. indica ATCC 9039 6199774 YP_001832462.1 CDS Bind_1333 NC_010581.1 1542794 1543249 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: eba:ebA6753 hypothetical protein; alkylhydroperoxidase 1542794..1543249 Beijerinckia indica subsp. indica ATCC 9039 6200328 YP_001832463.1 CDS Bind_1334 NC_010581.1 1543296 1545002 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_0877 general substrate transporter; major facilitator transporter complement(1543296..1545002) Beijerinckia indica subsp. indica ATCC 9039 6200862 YP_001832464.1 CDS Bind_1335 NC_010581.1 1545416 1546015 D PFAM: protein of unknown function DUF461; KEGG: xau:Xaut_0418 protein of unknown function DUF461; hypothetical protein 1545416..1546015 Beijerinckia indica subsp. indica ATCC 9039 6200028 YP_001832465.1 CDS Bind_1336 NC_010581.1 1546035 1546916 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: azc:AZC_0878 RNA methyltransferase; RNA methyltransferase complement(1546035..1546916) Beijerinckia indica subsp. indica ATCC 9039 6199581 YP_001832466.1 CDS Bind_1337 NC_010581.1 1547579 1548649 D PFAM: GAF domain protein; HWE histidine kinase; KEGG: mex:Mext_3300 PAS sensor protein; signal transduction histidine kinase 1547579..1548649 Beijerinckia indica subsp. indica ATCC 9039 6200332 YP_001832467.1 CDS Bind_1338 NC_010581.1 1548659 1550020 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase complement(1548659..1550020) Beijerinckia indica subsp. indica ATCC 9039 6201679 YP_001832468.1 CDS Bind_1339 NC_010581.1 1550242 1550700 R TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(1550242..1550700) Beijerinckia indica subsp. indica ATCC 9039 6198913 YP_001832469.1 CDS Bind_1340 NC_010581.1 1550697 1550873 R hypothetical protein complement(1550697..1550873) Beijerinckia indica subsp. indica ATCC 9039 6200060 YP_001832470.1 CDS Bind_1341 NC_010581.1 1551122 1551313 D TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: azc:AZC_0881 putative translocation complex protein; preprotein translocase subunit SecE 1551122..1551313 Beijerinckia indica subsp. indica ATCC 9039 6199887 YP_001832471.1 CDS Bind_1342 NC_010581.1 1551369 1551899 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mex:Mext_3997 transcription termination/antitermination factor NusG; NusG antitermination factor 1551369..1551899 Beijerinckia indica subsp. indica ATCC 9039 6199750 YP_001832472.1 CDS rplK NC_010581.1 1552128 1552556 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1552128..1552556 Beijerinckia indica subsp. indica ATCC 9039 6198888 YP_001832473.1 CDS rplA NC_010581.1 1552563 1553258 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1552563..1553258 Beijerinckia indica subsp. indica ATCC 9039 6200286 YP_001832474.1 CDS rplJ NC_010581.1 1553847 1554365 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1553847..1554365 Beijerinckia indica subsp. indica ATCC 9039 6199705 YP_001832475.1 CDS rplL NC_010581.1 1554444 1554824 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1554444..1554824 Beijerinckia indica subsp. indica ATCC 9039 6199200 YP_001832476.1 CDS rpoB NC_010581.1 1555240 1559403 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1555240..1559403 Beijerinckia indica subsp. indica ATCC 9039 6199230 YP_001832477.1 CDS Bind_1348 NC_010581.1 1559534 1563718 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1559534..1563718 Beijerinckia indica subsp. indica ATCC 9039 6200281 YP_001832478.1 CDS rpsL NC_010581.1 1564288 1564659 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1564288..1564659 Beijerinckia indica subsp. indica ATCC 9039 6200681 YP_001832479.1 CDS Bind_1350 NC_010581.1 1564766 1565236 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1564766..1565236 Beijerinckia indica subsp. indica ATCC 9039 6201124 YP_001832480.1 CDS Bind_1351 NC_010581.1 1565279 1567354 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1565279..1567354 Beijerinckia indica subsp. indica ATCC 9039 6199245 YP_001832481.1 CDS Bind_1352 NC_010581.1 1567399 1568589 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1567399..1568589 Beijerinckia indica subsp. indica ATCC 9039 6200779 YP_001832482.1 CDS rpsJ NC_010581.1 1568759 1569067 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1568759..1569067 Beijerinckia indica subsp. indica ATCC 9039 6201309 YP_001832483.1 CDS rplC NC_010581.1 1569135 1569857 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1569135..1569857 Beijerinckia indica subsp. indica ATCC 9039 6201329 YP_001832484.1 CDS rplD NC_010581.1 1569861 1570481 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1569861..1570481 Beijerinckia indica subsp. indica ATCC 9039 6200909 YP_001832485.1 CDS Bind_1356 NC_010581.1 1570478 1570789 D PFAM: Ribosomal protein L25/L23; KEGG: rpd:RPD_3182 50S ribosomal protein L23; 50S ribosomal protein L25 1570478..1570789 Beijerinckia indica subsp. indica ATCC 9039 6199657 YP_001832486.1 CDS rplB NC_010581.1 1570811 1571650 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1570811..1571650 Beijerinckia indica subsp. indica ATCC 9039 6199319 YP_001832487.1 CDS rpsS NC_010581.1 1571654 1571932 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1571654..1571932 Beijerinckia indica subsp. indica ATCC 9039 6200543 YP_001832488.1 CDS rplV NC_010581.1 1571942 1572331 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1571942..1572331 Beijerinckia indica subsp. indica ATCC 9039 6198667 YP_001832489.1 CDS Bind_1360 NC_010581.1 1572342 1573067 D KEGG: bja:bll5394 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 1572342..1573067 Beijerinckia indica subsp. indica ATCC 9039 6200468 YP_001832490.1 CDS rplP NC_010581.1 1573104 1573517 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1573104..1573517 Beijerinckia indica subsp. indica ATCC 9039 6199464 YP_001832491.1 CDS Bind_1362 NC_010581.1 1573530 1573742 D PFAM: ribosomal protein L29; KEGG: mex:Mext_2170 ribosomal protein L29; 50S ribosomal protein L29 1573530..1573742 Beijerinckia indica subsp. indica ATCC 9039 6200504 YP_001832492.1 CDS rpsQ NC_010581.1 1573784 1574026 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1573784..1574026 Beijerinckia indica subsp. indica ATCC 9039 6199943 YP_001832493.1 CDS rplN NC_010581.1 1574123 1574491 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1574123..1574491 Beijerinckia indica subsp. indica ATCC 9039 6200832 YP_001832494.1 CDS Bind_1365 NC_010581.1 1574491 1574808 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1574491..1574808 Beijerinckia indica subsp. indica ATCC 9039 6198515 YP_001832495.1 CDS Bind_1366 NC_010581.1 1574912 1575505 D PFAM: ribosomal protein L5; KEGG: xau:Xaut_4786 ribosomal protein L5; 50S ribosomal protein L5 1574912..1575505 Beijerinckia indica subsp. indica ATCC 9039 6201678 YP_001832496.1 CDS rpsN NC_010581.1 1575543 1575848 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1575543..1575848 Beijerinckia indica subsp. indica ATCC 9039 6200346 YP_001832497.1 CDS rpsH NC_010581.1 1575861 1576259 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1575861..1576259 Beijerinckia indica subsp. indica ATCC 9039 6200279 YP_001832498.1 CDS rplF NC_010581.1 1576284 1576817 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1576284..1576817 Beijerinckia indica subsp. indica ATCC 9039 6200784 YP_001832499.1 CDS rplR NC_010581.1 1576842 1577204 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1576842..1577204 Beijerinckia indica subsp. indica ATCC 9039 6199018 YP_001832500.1 CDS rpsE NC_010581.1 1577304 1577873 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1577304..1577873 Beijerinckia indica subsp. indica ATCC 9039 6199836 YP_001832501.1 CDS rpmD NC_010581.1 1577887 1578081 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1577887..1578081 Beijerinckia indica subsp. indica ATCC 9039 6201187 YP_001832502.1 CDS rplO NC_010581.1 1578094 1578576 D late assembly protein; 50S ribosomal protein L15 1578094..1578576 Beijerinckia indica subsp. indica ATCC 9039 6201162 YP_001832503.1 CDS Bind_1374 NC_010581.1 1578931 1580265 D TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: azc:AZC_2534 preprotein translocase SecY subunit; preprotein translocase subunit SecY 1578931..1580265 Beijerinckia indica subsp. indica ATCC 9039 6199813 YP_001832504.1 CDS adk NC_010581.1 1580262 1580843 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1580262..1580843 Beijerinckia indica subsp. indica ATCC 9039 6200570 YP_001832505.1 CDS Bind_1376 NC_010581.1 1580918 1581367 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mlo:mlr1674 hypothetical protein; BadM/Rrf2 family transcriptional regulator complement(1580918..1581367) Beijerinckia indica subsp. indica ATCC 9039 6201230 YP_001832506.1 CDS Bind_1377 NC_010581.1 1581648 1582145 R KEGG: bcs:BCAN_A0053 hypothetical protein; hypothetical protein complement(1581648..1582145) Beijerinckia indica subsp. indica ATCC 9039 6199497 YP_001832507.1 CDS Bind_1378 NC_010581.1 1582589 1583059 D PFAM: ribosomal protein L13; KEGG: azc:AZC_2190 ribosomal protein L13; 50S ribosomal protein L13 1582589..1583059 Beijerinckia indica subsp. indica ATCC 9039 6201141 YP_001832508.1 CDS rpsI NC_010581.1 1583062 1583541 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1583062..1583541 Beijerinckia indica subsp. indica ATCC 9039 6199895 YP_001832509.1 CDS Bind_1380 NC_010581.1 1583638 1584564 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 1583638..1584564 Beijerinckia indica subsp. indica ATCC 9039 6200514 YP_001832510.1 CDS Bind_1381 NC_010581.1 1584647 1586968 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mlo:mlr0937 poly-beta-hydroxybutyrate synthase; poly(R)-hydroxyalkanoic acid synthase complement(1584647..1586968) Beijerinckia indica subsp. indica ATCC 9039 6199496 YP_001832511.1 CDS Bind_1382 NC_010581.1 1587164 1587559 D hypothetical protein 1587164..1587559 Beijerinckia indica subsp. indica ATCC 9039 6198666 YP_001832512.1 CDS Bind_1383 NC_010581.1 1587807 1588985 D PFAM: phosphoribosylglycinamide synthetase; KEGG: rpe:RPE_4612 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 1587807..1588985 Beijerinckia indica subsp. indica ATCC 9039 6200998 YP_001832513.1 CDS Bind_1384 NC_010581.1 1589095 1589580 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(1589095..1589580) Beijerinckia indica subsp. indica ATCC 9039 6200811 YP_001832514.1 CDS Bind_1385 NC_010581.1 1589828 1590142 R KEGG: xau:Xaut_1139 hypothetical protein; hypothetical protein complement(1589828..1590142) Beijerinckia indica subsp. indica ATCC 9039 6199917 YP_001832515.1 CDS Bind_1386 NC_010581.1 1590235 1590876 R PFAM: isochorismatase hydrolase; KEGG: hau:Haur_3125 isochorismatase hydrolase; isochorismatase hydrolase complement(1590235..1590876) Beijerinckia indica subsp. indica ATCC 9039 6200810 YP_001832516.1 CDS Bind_1387 NC_010581.1 1591052 1592353 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1591052..1592353 Beijerinckia indica subsp. indica ATCC 9039 6199998 YP_001832517.1 CDS glpX NC_010581.1 1592648 1593643 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1592648..1593643 Beijerinckia indica subsp. indica ATCC 9039 6200108 YP_001832518.1 CDS Bind_1389 NC_010581.1 1593837 1595003 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: xau:Xaut_3138 ribonuclease D; ribonuclease D complement(1593837..1595003) Beijerinckia indica subsp. indica ATCC 9039 6198598 YP_001832519.1 CDS Bind_1390 NC_010581.1 1595199 1595747 D PFAM: Invasion associated locus B family protein; KEGG: mmw:Mmwyl1_0483 invasion associated locus B family protein; invasion associated locus B family protein 1595199..1595747 Beijerinckia indica subsp. indica ATCC 9039 6198797 YP_001832520.1 CDS Bind_1391 NC_010581.1 1596058 1596885 D hypothetical protein 1596058..1596885 Beijerinckia indica subsp. indica ATCC 9039 6201356 YP_001832521.1 CDS Bind_1392 NC_010581.1 1597231 1598340 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bja:bll7313 RND efflux membrane fusion protein; RND family efflux transporter MFP subunit 1597231..1598340 Beijerinckia indica subsp. indica ATCC 9039 6201326 YP_001832522.1 CDS Bind_1393 NC_010581.1 1598337 1601381 D PFAM: acriflavin resistance protein; KEGG: bja:bll7312 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1598337..1601381 Beijerinckia indica subsp. indica ATCC 9039 6198572 YP_001832523.1 CDS Bind_1394 NC_010581.1 1601624 1601914 D PFAM: YCII-related; KEGG: shm:Shewmr7_2107 YCII-related; hypothetical protein 1601624..1601914 Beijerinckia indica subsp. indica ATCC 9039 6199856 YP_001832524.1 CDS Bind_1395 NC_010581.1 1602125 1603579 R PFAM: Citrate transporter; KEGG: azc:AZC_1305 putative H+/gluconate symporter; citrate transporter complement(1602125..1603579) Beijerinckia indica subsp. indica ATCC 9039 6198791 YP_001832525.1 CDS Bind_1396 NC_010581.1 1604348 1606141 D TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 1604348..1606141 Beijerinckia indica subsp. indica ATCC 9039 6199281 YP_001832526.1 CDS Bind_1397 NC_010581.1 1606161 1606481 R hypothetical protein complement(1606161..1606481) Beijerinckia indica subsp. indica ATCC 9039 6199900 YP_001832527.1 CDS Bind_1398 NC_010581.1 1606775 1607452 R PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: mes:Meso_1193 putative phage repressor; putative phage repressor complement(1606775..1607452) Beijerinckia indica subsp. indica ATCC 9039 6199332 YP_001832528.1 CDS Bind_1399 NC_010581.1 1608260 1609168 R PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4754 secretion protein HlyD family protein; secretion protein HlyD family protein complement(1608260..1609168) Beijerinckia indica subsp. indica ATCC 9039 6199455 YP_001832529.1 CDS Bind_1400 NC_010581.1 1609184 1609375 R PFAM: protein of unknown function DUF1656; KEGG: pfl:PFL_4603 hypothetical protein; hypothetical protein complement(1609184..1609375) Beijerinckia indica subsp. indica ATCC 9039 6200348 YP_001832530.1 CDS Bind_1401 NC_010581.1 1609543 1611687 R KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region; fusaric acid resistance protein region complement(1609543..1611687) Beijerinckia indica subsp. indica ATCC 9039 6200790 YP_001832531.1 CDS Bind_1402 NC_010581.1 1611684 1612460 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpc:RPC_2496 exodeoxyribonuclease III (xth); exodeoxyribonuclease III complement(1611684..1612460) Beijerinckia indica subsp. indica ATCC 9039 6200193 YP_001832532.1 CDS Bind_1403 NC_010581.1 1612553 1614070 R KEGG: bbt:BBta_7186 putative membrane protein of unknown function; hypothetical protein complement(1612553..1614070) Beijerinckia indica subsp. indica ATCC 9039 6198987 YP_001832533.1 CDS Bind_1404 NC_010581.1 1614176 1615684 R KEGG: bbt:BBta_7186 putative membrane protein of unknown function; hypothetical protein complement(1614176..1615684) Beijerinckia indica subsp. indica ATCC 9039 6199989 YP_001832534.1 CDS Bind_1405 NC_010581.1 1615951 1617249 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_3901 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase complement(1615951..1617249) Beijerinckia indica subsp. indica ATCC 9039 6200677 YP_001832535.1 CDS Bind_1406 NC_010581.1 1617586 1618560 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A3272 protein of unknown function DUF6, transmembrane; hypothetical protein 1617586..1618560 Beijerinckia indica subsp. indica ATCC 9039 6200606 YP_001832536.1 CDS Bind_1407 NC_010581.1 1618639 1619436 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mlo:mll7814 quinone reductase; ribosyldihydronicotinamide dehydrogenase complement(1618639..1619436) Beijerinckia indica subsp. indica ATCC 9039 6200463 YP_001832537.1 CDS Bind_1408 NC_010581.1 1619533 1620465 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator 1619533..1620465 Beijerinckia indica subsp. indica ATCC 9039 6201118 YP_001832538.1 CDS Bind_1409 NC_010581.1 1620584 1621873 R KEGG: azc:AZC_1710 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(1620584..1621873) Beijerinckia indica subsp. indica ATCC 9039 6199944 YP_001832539.1 CDS gltX NC_010581.1 1622028 1623449 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1622028..1623449) Beijerinckia indica subsp. indica ATCC 9039 6201052 YP_001832540.1 CDS Bind_1411 NC_010581.1 1623715 1626093 D PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein; ComEC/Rec2-like protein 1623715..1626093 Beijerinckia indica subsp. indica ATCC 9039 6199249 YP_001832541.1 CDS Bind_1412 NC_010581.1 1626181 1626483 D KEGG: bcs:BCAN_A1554 hypothetical protein; hypothetical protein 1626181..1626483 Beijerinckia indica subsp. indica ATCC 9039 6199687 YP_001832542.1 CDS Bind_1413 NC_010581.1 1626612 1627325 R PFAM: glutamine amidotransferase class-I; KEGG: rru:Rru_A3512 glutamine amidotransferase; glutamine amidotransferase complement(1626612..1627325) Beijerinckia indica subsp. indica ATCC 9039 6200599 YP_001832543.1 CDS Bind_1414 NC_010581.1 1627376 1627963 R PFAM: Phosphoglycerate mutase; KEGG: ret:RHE_PF00323 putative phosphoglycerate mutase protein; phosphoglycerate mutase complement(1627376..1627963) Beijerinckia indica subsp. indica ATCC 9039 6199357 YP_001832544.1 CDS Bind_1415 NC_010581.1 1628143 1628772 D PFAM: transcriptional regulator PadR family protein; KEGG: gdi:GDI0892 putative transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 1628143..1628772 Beijerinckia indica subsp. indica ATCC 9039 6199934 YP_001832545.1 CDS Bind_1416 NC_010581.1 1628945 1629781 D PFAM: Indole-3-glycerol phosphate synthase; KEGG: bmt:BSUIS_A1189 indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 1628945..1629781 Beijerinckia indica subsp. indica ATCC 9039 6201560 YP_001832546.1 CDS Bind_1417 NC_010581.1 1629792 1630274 D TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mlo:mlr0616 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 1629792..1630274 Beijerinckia indica subsp. indica ATCC 9039 6199336 YP_001832547.1 CDS Bind_1418 NC_010581.1 1630271 1631551 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 1630271..1631551 Beijerinckia indica subsp. indica ATCC 9039 6199486 YP_001832548.1 CDS Bind_1419 NC_010581.1 1631723 1632436 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1631723..1632436 Beijerinckia indica subsp. indica ATCC 9039 6200426 YP_001832549.1 CDS Bind_1420 NC_010581.1 1632660 1632899 D hypothetical protein 1632660..1632899 Beijerinckia indica subsp. indica ATCC 9039 6201051 YP_001832550.1 CDS Bind_1421 NC_010581.1 1633039 1633380 D hypothetical protein 1633039..1633380 Beijerinckia indica subsp. indica ATCC 9039 6199284 YP_001832551.1 CDS Bind_1422 NC_010581.1 1633663 1634763 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ppd:Ppro_2287 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1633663..1634763 Beijerinckia indica subsp. indica ATCC 9039 6199913 YP_001832552.1 CDS Bind_1423 NC_010581.1 1634760 1635488 D PFAM: RelA/SpoT domain protein; KEGG: ppd:Ppro_2286 RelA/SpoT domain protein; RelA/SpoT domain-containing protein 1634760..1635488 Beijerinckia indica subsp. indica ATCC 9039 6199546 YP_001832553.1 CDS Bind_1424 NC_010581.1 1635708 1636565 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ppr:PBPRA1334 hypothetical protein; HNH endonuclease 1635708..1636565 Beijerinckia indica subsp. indica ATCC 9039 6200781 YP_001832554.1 CDS Bind_1425 NC_010581.1 1636802 1637221 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rpa:RPA1907 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(1636802..1637221) Beijerinckia indica subsp. indica ATCC 9039 6199126 YP_001832555.1 CDS Bind_1426 NC_010581.1 1637465 1638385 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_2291 transcriptional regulator, LysR family; LysR family transcriptional regulator 1637465..1638385 Beijerinckia indica subsp. indica ATCC 9039 6201211 YP_001832556.1 CDS Bind_1427 NC_010581.1 1638382 1639719 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2144 major facilitator superfamily MFS_1; major facilitator transporter 1638382..1639719 Beijerinckia indica subsp. indica ATCC 9039 6198669 YP_001832557.1 CDS Bind_1428 NC_010581.1 1639800 1639991 R hypothetical protein complement(1639800..1639991) Beijerinckia indica subsp. indica ATCC 9039 6199017 YP_001832558.1 CDS Bind_1429 NC_010581.1 1640192 1640524 D KEGG: bxe:Bxe_B0588 hypothetical protein; hypothetical protein 1640192..1640524 Beijerinckia indica subsp. indica ATCC 9039 6199020 YP_001832559.1 CDS Bind_1430 NC_010581.1 1640590 1641513 D PFAM: protein of unknown function DUF692; KEGG: bxe:Bxe_B0587 hypothetical protein; hypothetical protein 1640590..1641513 Beijerinckia indica subsp. indica ATCC 9039 6200068 YP_001832560.1 CDS Bind_1431 NC_010581.1 1641510 1642364 D KEGG: bxe:Bxe_B0585 hypothetical protein; hypothetical protein 1641510..1642364 Beijerinckia indica subsp. indica ATCC 9039 6198924 YP_001832561.1 CDS Bind_1432 NC_010581.1 1642361 1642888 D PFAM: DoxX family protein; KEGG: bxe:Bxe_B0584 hypothetical protein; DoxX family protein 1642361..1642888 Beijerinckia indica subsp. indica ATCC 9039 6199162 YP_001832562.1 CDS Bind_1433 NC_010581.1 1642961 1643611 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: nha:Nham_4645 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 1642961..1643611 Beijerinckia indica subsp. indica ATCC 9039 6198990 YP_001832563.1 CDS Bind_1434 NC_010581.1 1643611 1644267 D KEGG: nha:Nham_4644 hypothetical protein; hypothetical protein 1643611..1644267 Beijerinckia indica subsp. indica ATCC 9039 6199869 YP_001832564.1 CDS Bind_1435 NC_010581.1 1644563 1645429 R PFAM: beta-lactamase; KEGG: gbe:GbCGDNIH1_1173 beta-lactamase; Beta-lactamase complement(1644563..1645429) Beijerinckia indica subsp. indica ATCC 9039 6199003 YP_001832565.1 CDS Bind_1436 NC_010581.1 1645771 1646688 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1311 putative transcriptional regulator; LysR family transcriptional regulator complement(1645771..1646688) Beijerinckia indica subsp. indica ATCC 9039 6199278 YP_001832566.1 CDS Bind_1437 NC_010581.1 1646822 1647370 D KEGG: azc:AZC_1312 hypothetical protein; hypothetical protein 1646822..1647370 Beijerinckia indica subsp. indica ATCC 9039 6201166 YP_001832567.1 CDS Bind_1438 NC_010581.1 1647367 1647507 D hypothetical protein 1647367..1647507 Beijerinckia indica subsp. indica ATCC 9039 6198508 YP_001832568.1 CDS Bind_1439 NC_010581.1 1647634 1648500 D KEGG: bra:BRADO6401 hypothetical protein; hypothetical protein 1647634..1648500 Beijerinckia indica subsp. indica ATCC 9039 6200015 YP_001832569.1 CDS Bind_1441 NC_010581.1 1648762 1649229 D KEGG: smd:Smed_5100 hypothetical protein; hypothetical protein 1648762..1649229 Beijerinckia indica subsp. indica ATCC 9039 6199883 YP_001832570.1 CDS Bind_1442 NC_010581.1 1649226 1649771 D PFAM: RES domain protein; KEGG: mlo:mll9650 hypothetical protein; RES domain-containing protein 1649226..1649771 Beijerinckia indica subsp. indica ATCC 9039 6199282 YP_001832571.1 CDS Bind_1443 NC_010581.1 1649788 1651383 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nwi:Nwi_2276 Fe-S oxidoreductase; radical SAM domain-containing protein complement(1649788..1651383) Beijerinckia indica subsp. indica ATCC 9039 6200407 YP_001832572.1 CDS trpD NC_010581.1 1651615 1652643 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1651615..1652643) Beijerinckia indica subsp. indica ATCC 9039 6199358 YP_001832573.1 CDS Bind_1445 NC_010581.1 1652653 1653267 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase complement(1652653..1653267) Beijerinckia indica subsp. indica ATCC 9039 6201202 YP_001832574.1 CDS Bind_1446 NC_010581.1 1653554 1654102 D KEGG: pde:Pden_1711 hypothetical protein; hypothetical protein 1653554..1654102 Beijerinckia indica subsp. indica ATCC 9039 6198890 YP_001832575.1 CDS Bind_1447 NC_010581.1 1654236 1655336 R PFAM: Choloylglycine hydrolase; KEGG: oan:Oant_1703 penicillin amidase; choloylglycine hydrolase complement(1654236..1655336) Beijerinckia indica subsp. indica ATCC 9039 6199765 YP_001832576.1 CDS Bind_1448 NC_010581.1 1655541 1657061 R KEGG: azc:AZC_2208 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; anthranilate synthase component I complement(1655541..1657061) Beijerinckia indica subsp. indica ATCC 9039 6199865 YP_001832577.1 CDS Bind_1449 NC_010581.1 1657133 1659055 R KEGG: rpc:RPC_2468 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1657133..1659055) Beijerinckia indica subsp. indica ATCC 9039 6200225 YP_001832578.1 CDS Bind_1450 NC_010581.1 1659311 1660069 D PFAM: triosephosphate isomerase; KEGG: nwi:Nwi_1835 triosephosphate isomerase; Triose-phosphate isomerase 1659311..1660069 Beijerinckia indica subsp. indica ATCC 9039 6199876 YP_001832579.1 CDS Bind_1451 NC_010581.1 1660298 1660717 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 1660298..1660717 Beijerinckia indica subsp. indica ATCC 9039 6199611 YP_001832580.1 CDS pyrG NC_010581.1 1660860 1662488 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1660860..1662488 Beijerinckia indica subsp. indica ATCC 9039 6200399 YP_001832581.1 CDS Bind_1454 NC_010581.1 1662879 1663769 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2638 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1662879..1663769) Beijerinckia indica subsp. indica ATCC 9039 6199854 YP_001832582.1 CDS Bind_1455 NC_010581.1 1663928 1664248 D KEGG: bch:Bcen2424_5410 hypothetical protein; hypothetical protein 1663928..1664248 Beijerinckia indica subsp. indica ATCC 9039 6200773 YP_001832583.1 CDS Bind_1456 NC_010581.1 1664272 1665018 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr7057 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 1664272..1665018 Beijerinckia indica subsp. indica ATCC 9039 6200104 YP_001832584.1 CDS Bind_1458 NC_010581.1 1665546 1666526 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH02989 hypothetical protein; NAD-dependent epimerase/dehydratase complement(1665546..1666526) Beijerinckia indica subsp. indica ATCC 9039 6198519 YP_001832585.1 CDS Bind_1459 NC_010581.1 1666629 1667570 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3334 probable transcription regulator protein; LysR family transcriptional regulator 1666629..1667570 Beijerinckia indica subsp. indica ATCC 9039 6199800 YP_001832586.1 CDS Bind_1460 NC_010581.1 1667703 1667945 D hypothetical protein 1667703..1667945 Beijerinckia indica subsp. indica ATCC 9039 6199044 YP_001832587.1 CDS Bind_1461 NC_010581.1 1668349 1668648 R TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; KEGG: bbt:BBta_4472 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase complement(1668349..1668648) Beijerinckia indica subsp. indica ATCC 9039 6199498 YP_001832588.1 CDS Bind_1462 NC_010581.1 1669102 1669629 R hypothetical protein complement(1669102..1669629) Beijerinckia indica subsp. indica ATCC 9039 6200798 YP_001832589.1 CDS Bind_1463 NC_010581.1 1669788 1670246 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(1669788..1670246) Beijerinckia indica subsp. indica ATCC 9039 6201091 YP_001832590.1 CDS Bind_1464 NC_010581.1 1670665 1671297 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_5351 putative transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 1670665..1671297 Beijerinckia indica subsp. indica ATCC 9039 6199253 YP_001832591.1 CDS Bind_1465 NC_010581.1 1671311 1672195 R PFAM: Lytic transglycosylase catalytic; KEGG: rpc:RPC_2909 lytic transglycosylase, catalytic; lytic transglycosylase complement(1671311..1672195) Beijerinckia indica subsp. indica ATCC 9039 6200548 YP_001832592.1 CDS eno NC_010581.1 1672577 1673860 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1672577..1673860 Beijerinckia indica subsp. indica ATCC 9039 6200853 YP_001832593.1 CDS Bind_1468 NC_010581.1 1675030 1675863 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: smd:Smed_1211 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1675030..1675863) Beijerinckia indica subsp. indica ATCC 9039 6201371 YP_001832594.1 CDS Bind_1469 NC_010581.1 1675881 1676408 R KEGG: ret:RHE_CH02036 hypothetical protein; hypothetical protein complement(1675881..1676408) Beijerinckia indica subsp. indica ATCC 9039 6199040 YP_001832595.1 CDS Bind_1470 NC_010581.1 1676453 1677268 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 short chain dehydrogenase; short chain dehydrogenase complement(1676453..1677268) Beijerinckia indica subsp. indica ATCC 9039 6199547 YP_001832596.1 CDS Bind_1471 NC_010581.1 1677326 1677727 R PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein; hypothetical protein complement(1677326..1677727) Beijerinckia indica subsp. indica ATCC 9039 6198832 YP_001832597.1 CDS Bind_1472 NC_010581.1 1677889 1678767 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02039 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator complement(1677889..1678767) Beijerinckia indica subsp. indica ATCC 9039 6200858 YP_001832598.1 CDS Bind_1474 NC_010581.1 1680202 1680900 D PFAM: ThiJ/PfpI domain protein; KEGG: acr:Acry_0492 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1680202..1680900 Beijerinckia indica subsp. indica ATCC 9039 6200312 YP_001832599.1 CDS Bind_1475 NC_010581.1 1680902 1681369 D PFAM: protein of unknown function DUF1348; KEGG: bmu:Bmul_5318 protein of unknown function DUF1348; hypothetical protein 1680902..1681369 Beijerinckia indica subsp. indica ATCC 9039 6198925 YP_001832600.1 CDS Bind_1476 NC_010581.1 1681462 1682499 R PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH02414 probable epoxide hydrolase protein; alpha/beta hydrolase fold protein complement(1681462..1682499) Beijerinckia indica subsp. indica ATCC 9039 6199399 YP_001832601.1 CDS Bind_1477 NC_010581.1 1682526 1683494 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3671 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(1682526..1683494) Beijerinckia indica subsp. indica ATCC 9039 6198404 YP_001832602.1 CDS Bind_1478 NC_010581.1 1683548 1684114 R PFAM: regulatory protein TetR; KEGG: bam:Bamb_3672 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1683548..1684114) Beijerinckia indica subsp. indica ATCC 9039 6198988 YP_001832603.1 CDS Bind_1480 NC_010581.1 1685026 1685778 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: esa:ESA_01962 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(1685026..1685778) Beijerinckia indica subsp. indica ATCC 9039 6198764 YP_001832604.1 CDS Bind_1481 NC_010581.1 1685893 1686798 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: esa:ESA_01963 hypothetical protein; LysR family transcriptional regulator 1685893..1686798 Beijerinckia indica subsp. indica ATCC 9039 6199144 YP_001832605.1 CDS Bind_1482 NC_010581.1 1687070 1687411 D PFAM: Protein of unknown function DUF1778; KEGG: rpa:RPA3583 hypothetical protein; hypothetical protein 1687070..1687411 Beijerinckia indica subsp. indica ATCC 9039 6199896 YP_001832606.1 CDS Bind_1484 NC_010581.1 1687950 1688909 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpa:RPA1804 hypothetical protein; NAD-dependent epimerase/dehydratase complement(1687950..1688909) Beijerinckia indica subsp. indica ATCC 9039 6199275 YP_001832607.1 CDS Bind_1485 NC_010581.1 1688964 1689908 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA1805 transcriptional regulator, LysR family; LysR family transcriptional regulator 1688964..1689908 Beijerinckia indica subsp. indica ATCC 9039 6201186 YP_001832608.1 CDS Bind_1486 NC_010581.1 1689959 1690855 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: sus:Acid_6732 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1689959..1690855) Beijerinckia indica subsp. indica ATCC 9039 6198518 YP_001832609.1 CDS Bind_1487 NC_010581.1 1690952 1691782 D SMART: helix-turn-helix domain protein; KEGG: bmu:Bmul_1288 transcriptional regulator, XRE family; XRE family transcriptional regulator 1690952..1691782 Beijerinckia indica subsp. indica ATCC 9039 6201308 YP_001832610.1 CDS Bind_1488 NC_010581.1 1691797 1692405 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: hch:HCH_03333 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(1691797..1692405) Beijerinckia indica subsp. indica ATCC 9039 6200517 YP_001832611.1 CDS Bind_1489 NC_010581.1 1692410 1692847 R KEGG: sal:Sala_0092 hypothetical protein; hypothetical protein complement(1692410..1692847) Beijerinckia indica subsp. indica ATCC 9039 6199838 YP_001832612.1 CDS Bind_1490 NC_010581.1 1692965 1693360 D PFAM: helix-turn-helix HxlR type; KEGG: fre:Franean1_4812 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1692965..1693360 Beijerinckia indica subsp. indica ATCC 9039 6199985 YP_001832613.1 CDS Bind_1491 NC_010581.1 1693468 1693725 R KEGG: cme:CMK267C hypothetical protein Pfam: DUF1640 HTH_10 PROSITE: GLY_RICH; hypothetical protein complement(1693468..1693725) Beijerinckia indica subsp. indica ATCC 9039 6200531 YP_001832614.1 CDS Bind_1492 NC_010581.1 1694152 1694826 D KEGG: aor:AO090023000157 predicted protein Pfam: SGL; hypothetical protein 1694152..1694826 Beijerinckia indica subsp. indica ATCC 9039 6201197 YP_001832615.1 CDS Bind_1493 NC_010581.1 1694795 1695178 D KEGG: ana:all0351 unknown protein; hypothetical protein 1694795..1695178 Beijerinckia indica subsp. indica ATCC 9039 6199699 YP_001832616.1 CDS Bind_1494 NC_010581.1 1695280 1695921 D PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_0928 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1695280..1695921 Beijerinckia indica subsp. indica ATCC 9039 6201174 YP_001832617.1 CDS Bind_1495 NC_010581.1 1696000 1696500 D PFAM: regulatory protein MarR; KEGG: mxa:MXAN_1760 transcriptional regulator, MarR family; MarR family transcriptional regulator 1696000..1696500 Beijerinckia indica subsp. indica ATCC 9039 6200850 YP_001832618.1 CDS Bind_1496 NC_010581.1 1696841 1697110 D PFAM: protein of unknown function DUF1044; KEGG: mex:Mext_1502 protein of unknown function DUF1044; hypothetical protein 1696841..1697110 Beijerinckia indica subsp. indica ATCC 9039 6199663 YP_001832619.1 CDS Bind_1497 NC_010581.1 1697094 1697417 D SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1503 putative DNA-binding protein; XRE family transcriptional regulator 1697094..1697417 Beijerinckia indica subsp. indica ATCC 9039 6201048 YP_001832620.1 CDS Bind_1498 NC_010581.1 1697458 1697721 D KEGG: noc:Noc_1294 hypothetical protein; hypothetical protein 1697458..1697721 Beijerinckia indica subsp. indica ATCC 9039 6201044 YP_001832621.1 CDS Bind_1499 NC_010581.1 1698127 1699329 D KEGG: xcb:XC_2635 hypothetical protein; hypothetical protein 1698127..1699329 Beijerinckia indica subsp. indica ATCC 9039 6201224 YP_001832622.1 CDS Bind_1500 NC_010581.1 1699310 1699813 D KEGG: mag:amb1133 hypothetical protein; hypothetical protein 1699310..1699813 Beijerinckia indica subsp. indica ATCC 9039 6201483 YP_001832623.1 CDS Bind_1501 NC_010581.1 1699810 1701729 D KEGG: bps:BPSL0770 hypothetical protein; hypothetical protein 1699810..1701729 Beijerinckia indica subsp. indica ATCC 9039 6200019 YP_001832624.1 CDS Bind_1502 NC_010581.1 1701884 1702372 R PFAM: heat shock protein DnaJ domain protein; KEGG: xau:Xaut_2284 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(1701884..1702372) Beijerinckia indica subsp. indica ATCC 9039 6199868 YP_001832625.1 CDS Bind_1503 NC_010581.1 1702605 1704173 D KEGG: bra:BRADO0256 putative alkaline phosphatase (PhoD); putative signal peptide; putative alkaline phosphatase (PhoD); putative signal peptide 1702605..1704173 Beijerinckia indica subsp. indica ATCC 9039 6199481 YP_001832626.1 CDS Bind_1504 NC_010581.1 1704253 1704573 D PFAM: Septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator; septum formation initiator 1704253..1704573 Beijerinckia indica subsp. indica ATCC 9039 6200400 YP_001832627.1 CDS Bind_1505 NC_010581.1 1704815 1705852 D KEGG: smd:Smed_1076 dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 1704815..1705852 Beijerinckia indica subsp. indica ATCC 9039 6201357 YP_001832628.1 CDS Bind_1506 NC_010581.1 1706049 1707425 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1706049..1707425 Beijerinckia indica subsp. indica ATCC 9039 6200442 YP_001832629.1 CDS Bind_1507 NC_010581.1 1707450 1708808 D KEGG: ret:RHE_CH01935 dihydrolipoamide acetyltransferase protein; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1707450..1708808 Beijerinckia indica subsp. indica ATCC 9039 6200327 YP_001832630.1 CDS Bind_1508 NC_010581.1 1708860 1710302 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1708860..1710302 Beijerinckia indica subsp. indica ATCC 9039 6201034 YP_001832631.1 CDS Bind_1509 NC_010581.1 1710367 1711344 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1710367..1711344 Beijerinckia indica subsp. indica ATCC 9039 6201039 YP_001832632.1 CDS Bind_1510 NC_010581.1 1711370 1711855 R PFAM: RES domain protein; KEGG: reh:H16_B1263 hypothetical membrane protein; RES domain-containing protein complement(1711370..1711855) Beijerinckia indica subsp. indica ATCC 9039 6200519 YP_001832633.1 CDS Bind_1511 NC_010581.1 1711852 1712340 R PFAM: conserved hypothetical protein; KEGG: acr:Acry_3436 hypothetical protein; hypothetical protein complement(1711852..1712340) Beijerinckia indica subsp. indica ATCC 9039 6201818 YP_001832634.1 CDS Bind_1512 NC_010581.1 1712430 1712888 D PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase; cyclase/dehydrase 1712430..1712888 Beijerinckia indica subsp. indica ATCC 9039 6199950 YP_001832635.1 CDS Bind_1513 NC_010581.1 1712896 1714068 R PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0831 hypothetical protein; major facilitator transporter complement(1712896..1714068) Beijerinckia indica subsp. indica ATCC 9039 6198162 YP_001832636.1 CDS Bind_1514 NC_010581.1 1714188 1714691 R PFAM: CinA domain protein; KEGG: mmr:Mmar10_1438 CinA domain protein; CinA domain-containing protein complement(1714188..1714691) Beijerinckia indica subsp. indica ATCC 9039 6199626 YP_001832637.1 CDS Bind_1515 NC_010581.1 1714688 1715416 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ava:Ava_3671 haloacid dehalogenase-like hydrolase; hydrolase complement(1714688..1715416) Beijerinckia indica subsp. indica ATCC 9039 6200061 YP_001832638.1 CDS Bind_1516 NC_010581.1 1715484 1716710 R TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: nha:Nham_1834 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1715484..1716710) Beijerinckia indica subsp. indica ATCC 9039 6200887 YP_001832639.1 CDS Bind_1517 NC_010581.1 1716935 1717987 D TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rpe:RPE_2756 putative TIM-barrel protein, nifR3 family; NifR3 family TIM-barrel protein 1716935..1717987 Beijerinckia indica subsp. indica ATCC 9039 6199871 YP_001832640.1 CDS Bind_1518 NC_010581.1 1717984 1719159 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: xau:Xaut_4400 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 1717984..1719159 Beijerinckia indica subsp. indica ATCC 9039 6201341 YP_001832641.1 CDS Bind_1519 NC_010581.1 1719273 1720754 D KEGG: xau:Xaut_4399 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 1719273..1720754 Beijerinckia indica subsp. indica ATCC 9039 6199968 YP_001832642.1 CDS Bind_1520 NC_010581.1 1720870 1723143 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: mex:Mext_2822 PAS sensor protein; multi-sensor signal transduction histidine kinase 1720870..1723143 Beijerinckia indica subsp. indica ATCC 9039 6199112 YP_001832643.1 CDS Bind_1521 NC_010581.1 1723334 1724701 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein; two component, sigma54 specific, Fis family transcriptional regulator 1723334..1724701 Beijerinckia indica subsp. indica ATCC 9039 6199459 YP_001832644.1 CDS Bind_1522 NC_010581.1 1724754 1725320 D PFAM: Chromate transporter; KEGG: reu:Reut_A2355 chromate transporter; chromate transporter 1724754..1725320 Beijerinckia indica subsp. indica ATCC 9039 6199196 YP_001832645.1 CDS Bind_1523 NC_010581.1 1725317 1725841 D PFAM: Chromate transporter; KEGG: rso:RSc0980 probable transmembrane protein; chromate transporter 1725317..1725841 Beijerinckia indica subsp. indica ATCC 9039 6200278 YP_001832646.1 CDS Bind_1524 NC_010581.1 1726064 1726924 D PFAM: aminotransferase class IV; KEGG: mes:Meso_1614 aminotransferase, class IV; class IV aminotransferase 1726064..1726924 Beijerinckia indica subsp. indica ATCC 9039 6200317 YP_001832647.1 CDS Bind_1525 NC_010581.1 1727075 1727329 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: xau:Xaut_4393 RNA chaperone Hfq; RNA chaperone Hfq 1727075..1727329 Beijerinckia indica subsp. indica ATCC 9039 6200304 YP_001832648.1 CDS Bind_1526 NC_010581.1 1727458 1728858 D TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_0068 GTP-binding protein HflX; GTP-binding proten HflX 1727458..1728858 Beijerinckia indica subsp. indica ATCC 9039 6200730 YP_001832649.1 CDS Bind_1527 NC_010581.1 1728847 1729755 R TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: xau:Xaut_4391 MazG family protein; MazG family protein complement(1728847..1729755) Beijerinckia indica subsp. indica ATCC 9039 6199761 YP_001832650.1 CDS Bind_1528 NC_010581.1 1729777 1730451 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: xau:Xaut_0192 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(1729777..1730451) Beijerinckia indica subsp. indica ATCC 9039 6199829 YP_001832651.1 CDS Bind_1529 NC_010581.1 1730957 1733353 R PFAM: Transketolase central region; KEGG: mlo:mlr9539 pyruvate dehydrogenase E1 component homolog; transketolase central region complement(1730957..1733353) Beijerinckia indica subsp. indica ATCC 9039 6200922 YP_001832652.1 CDS Bind_1530 NC_010581.1 1733488 1733961 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll9538 transcriptional regulator homolog; AsnC family transcriptional regulator 1733488..1733961 Beijerinckia indica subsp. indica ATCC 9039 6201480 YP_001832653.1 CDS Bind_1531 NC_010581.1 1734006 1735670 R KEGG: bpt:Bpet4207 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter complement(1734006..1735670) Beijerinckia indica subsp. indica ATCC 9039 6200490 YP_001832654.1 CDS Bind_1532 NC_010581.1 1735786 1736583 R KEGG: azc:AZC_2264 metal-dependent hydrolase; metal-dependent hydrolase complement(1735786..1736583) Beijerinckia indica subsp. indica ATCC 9039 6200728 YP_001832655.1 CDS Bind_1533 NC_010581.1 1736580 1737395 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mlo:mll0418 hypothetical protein; TatD family hydrolase complement(1736580..1737395) Beijerinckia indica subsp. indica ATCC 9039 6200886 YP_001832656.1 CDS Bind_1534 NC_010581.1 1737398 1738990 R TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: bov:BOV_0962 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1737398..1738990) Beijerinckia indica subsp. indica ATCC 9039 6201260 YP_001832657.1 CDS Bind_1535 NC_010581.1 1739092 1740210 R KEGG: azc:AZC_2174 putative DNA polymerase III delta prime subunit; putative DNA polymerase III delta prime subunit complement(1739092..1740210) Beijerinckia indica subsp. indica ATCC 9039 6199482 YP_001832658.1 CDS Bind_1536 NC_010581.1 1740200 1740913 R PFAM: thymidylate kinase; KEGG: xau:Xaut_4325 dTMP kinase; dTMP kinase complement(1740200..1740913) Beijerinckia indica subsp. indica ATCC 9039 6200937 YP_001832659.1 CDS Bind_1537 NC_010581.1 1740910 1742094 R PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(1740910..1742094) Beijerinckia indica subsp. indica ATCC 9039 6199662 YP_001832660.1 CDS Bind_1538 NC_010581.1 1742261 1743412 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bcs:BCAN_A1007 rare lipoprotein A; rare lipoprotein A complement(1742261..1743412) Beijerinckia indica subsp. indica ATCC 9039 6201809 YP_001832661.1 CDS Bind_1539 NC_010581.1 1743831 1744163 D KEGG: mca:MCA2292 hypothetical protein; hypothetical protein 1743831..1744163 Beijerinckia indica subsp. indica ATCC 9039 6201160 YP_001832662.1 CDS Bind_1540 NC_010581.1 1744160 1744606 D hypothetical protein 1744160..1744606 Beijerinckia indica subsp. indica ATCC 9039 6200144 YP_001832663.1 CDS Bind_1541 NC_010581.1 1745077 1745448 D KEGG: bvi:Bcep1808_7672 hypothetical protein; hypothetical protein 1745077..1745448 Beijerinckia indica subsp. indica ATCC 9039 6201142 YP_001832664.1 CDS Bind_1542 NC_010581.1 1745516 1745842 D KEGG: bxe:Bxe_A0211 hypothetical protein; hypothetical protein 1745516..1745842 Beijerinckia indica subsp. indica ATCC 9039 6199573 YP_001832665.1 CDS Bind_1543 NC_010581.1 1745839 1746942 D KEGG: bxe:Bxe_A0212 hypothetical protein; hypothetical protein 1745839..1746942 Beijerinckia indica subsp. indica ATCC 9039 6198613 YP_001832666.1 CDS Bind_1544 NC_010581.1 1746939 1747850 R KEGG: bxe:Bxe_A0213 hypothetical protein; hypothetical protein complement(1746939..1747850) Beijerinckia indica subsp. indica ATCC 9039 6199660 YP_001832667.1 CDS Bind_1545 NC_010581.1 1747828 1748856 R PFAM: thymidylate synthase; KEGG: bxe:Bxe_A0214 putative thymidylate synthase; thymidylate synthase complement(1747828..1748856) Beijerinckia indica subsp. indica ATCC 9039 6201312 YP_001832668.1 CDS Bind_1546 NC_010581.1 1749166 1749525 D KEGG: swi:Swit_4942 hypothetical protein; hypothetical protein 1749166..1749525 Beijerinckia indica subsp. indica ATCC 9039 6200341 YP_001832669.1 CDS Bind_1547 NC_010581.1 1749522 1750286 D KEGG: swi:Swit_4943 hypothetical protein; hypothetical protein 1749522..1750286 Beijerinckia indica subsp. indica ATCC 9039 6199820 YP_001832670.1 CDS Bind_1549 NC_010581.1 1750537 1751493 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rle:RL1232 putative AraC family transcriptional regulator; AraC family transcriptional regulator 1750537..1751493 Beijerinckia indica subsp. indica ATCC 9039 6200787 YP_001832671.1 CDS Bind_1550 NC_010581.1 1751843 1752148 R PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit conserved region; ETC complex I subunit complement(1751843..1752148) Beijerinckia indica subsp. indica ATCC 9039 6200892 YP_001832672.1 CDS Bind_1551 NC_010581.1 1752424 1752894 R PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 protein of unknown function DUF192; hypothetical protein complement(1752424..1752894) Beijerinckia indica subsp. indica ATCC 9039 6200083 YP_001832673.1 CDS Bind_1552 NC_010581.1 1753184 1753801 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein complement(1753184..1753801) Beijerinckia indica subsp. indica ATCC 9039 6199376 YP_001832674.1 CDS Bind_1553 NC_010581.1 1754022 1754783 R PFAM: Silent information regulator protein Sir2; KEGG: azc:AZC_1935 silent information regulator protein; silent information regulator protein Sir2 complement(1754022..1754783) Beijerinckia indica subsp. indica ATCC 9039 6200203 YP_001832675.1 CDS Bind_1554 NC_010581.1 1755123 1756664 D thiamine-pyrophosphate requiring enzyme; hypothetical protein 1755123..1756664 Beijerinckia indica subsp. indica ATCC 9039 6199710 YP_001832676.1 CDS Bind_1555 NC_010581.1 1756796 1757959 D KEGG: ftn:FTN_0894 GDSL-like lipolytic enzyme; hypothetical protein 1756796..1757959 Beijerinckia indica subsp. indica ATCC 9039 6199328 YP_001832677.1 CDS Bind_1556 NC_010581.1 1758244 1759395 D KEGG: ftn:FTN_0894 GDSL-like lipolytic enzyme; hypothetical protein 1758244..1759395 Beijerinckia indica subsp. indica ATCC 9039 6200204 YP_001832678.1 CDS Bind_1557 NC_010581.1 1759450 1761306 R PFAM: Carbamoyltransferase; KEGG: mag:amb0035 predicted carbamoyl transferase; carbamoyltransferase complement(1759450..1761306) Beijerinckia indica subsp. indica ATCC 9039 6199108 YP_001832679.1 CDS Bind_1558 NC_010581.1 1761542 1761691 R KEGG: mag:amb0034 hypothetical protein; hypothetical protein complement(1761542..1761691) Beijerinckia indica subsp. indica ATCC 9039 6199850 YP_001832680.1 CDS Bind_1559 NC_010581.1 1761701 1762117 R KEGG: mag:amb0033 hypothetical protein; hypothetical protein complement(1761701..1762117) Beijerinckia indica subsp. indica ATCC 9039 6199815 YP_001832681.1 CDS Bind_1560 NC_010581.1 1762323 1763165 R PFAM: histidine biosynthesis protein; Indole-3-glycerol phosphate synthase; KEGG: xau:Xaut_4302 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase complement(1762323..1763165) Beijerinckia indica subsp. indica ATCC 9039 6199393 YP_001832682.1 CDS Bind_1561 NC_010581.1 1763466 1763984 D PFAM: superoxide dismutase copper/zinc binding; KEGG: cak:Caul_2872 superoxide dismutase copper/zinc binding; Cu-Zn family superoxide dismutase 1763466..1763984 Beijerinckia indica subsp. indica ATCC 9039 6199689 YP_001832683.1 CDS Bind_1562 NC_010581.1 1763987 1764265 R KEGG: azc:AZC_2831 hypothetical protein; hypothetical protein complement(1763987..1764265) Beijerinckia indica subsp. indica ATCC 9039 6199805 YP_001832684.1 CDS Bind_1563 NC_010581.1 1764628 1766460 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: azc:AZC_1851 RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ complement(1764628..1766460) Beijerinckia indica subsp. indica ATCC 9039 6200852 YP_001832685.1 CDS Bind_1564 NC_010581.1 1766607 1767200 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1766607..1767200 Beijerinckia indica subsp. indica ATCC 9039 6200479 YP_001832686.1 CDS Bind_1565 NC_010581.1 1767256 1767495 D KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; hypothetical protein 1767256..1767495 Beijerinckia indica subsp. indica ATCC 9039 6199784 YP_001832687.1 CDS Bind_1566 NC_010581.1 1767488 1768183 D phosphorylates nucleosides or dinucleosides to make UMP or CMP as part of the pyrimidine salvage pathway; uridine kinase 1767488..1768183 Beijerinckia indica subsp. indica ATCC 9039 6201193 YP_001832688.1 CDS Bind_1567 NC_010581.1 1768327 1769844 R PFAM: Ppx/GppA phosphatase; KEGG: azc:AZC_3665 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(1768327..1769844) Beijerinckia indica subsp. indica ATCC 9039 6200410 YP_001832689.1 CDS Bind_1568 NC_010581.1 1769849 1772290 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1769849..1772290) Beijerinckia indica subsp. indica ATCC 9039 6200982 YP_001832690.1 CDS Bind_1569 NC_010581.1 1772565 1773083 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bja:bll3178 transcriptional regulatory protein; AsnC family transcriptional regulator complement(1772565..1773083) Beijerinckia indica subsp. indica ATCC 9039 6201684 YP_001832691.1 CDS Bind_1570 NC_010581.1 1773355 1774476 D TIGRFAM: alanine dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: bja:blr3179 probable alanine dehydrogenase oxidoreductase protein; alanine dehydrogenase 1773355..1774476 Beijerinckia indica subsp. indica ATCC 9039 6201304 YP_001832692.1 CDS Bind_1571 NC_010581.1 1774541 1775140 R PFAM: nitroreductase; KEGG: gbe:GbCGDNIH1_0027 nitroreductase family protein; nitroreductase complement(1774541..1775140) Beijerinckia indica subsp. indica ATCC 9039 6199830 YP_001832693.1 CDS Bind_1572 NC_010581.1 1775447 1776481 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rru:Rru_A3400 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein complement(1775447..1776481) Beijerinckia indica subsp. indica ATCC 9039 6200273 YP_001832694.1 CDS Bind_1573 NC_010581.1 1776680 1777051 R PFAM: protein of unknown function DUF37; KEGG: azc:AZC_0945 unknown function protein; hypothetical protein complement(1776680..1777051) Beijerinckia indica subsp. indica ATCC 9039 6200814 YP_001832695.1 CDS Bind_1574 NC_010581.1 1777454 1778251 D PFAM: MltA-interacting MipA family protein; KEGG: xau:Xaut_1031 MltA-interacting MipA family protein; MltA-interacting MipA family protein 1777454..1778251 Beijerinckia indica subsp. indica ATCC 9039 6201274 YP_001832696.1 CDS Bind_1575 NC_010581.1 1778390 1778869 R PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like; NifU domain-containing protein complement(1778390..1778869) Beijerinckia indica subsp. indica ATCC 9039 6200569 YP_001832697.1 CDS Bind_1576 NC_010581.1 1779032 1779673 D PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I; GTP cyclohydrolase I 1779032..1779673 Beijerinckia indica subsp. indica ATCC 9039 6200944 YP_001832698.1 CDS Bind_1577 NC_010581.1 1779791 1780462 R hypothetical protein complement(1779791..1780462) Beijerinckia indica subsp. indica ATCC 9039 6199227 YP_001832699.1 CDS Bind_1578 NC_010581.1 1780465 1780938 R hypothetical protein complement(1780465..1780938) Beijerinckia indica subsp. indica ATCC 9039 6200183 YP_001832700.1 CDS Bind_1579 NC_010581.1 1781250 1781708 D PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1781250..1781708 Beijerinckia indica subsp. indica ATCC 9039 6199262 YP_001832701.1 CDS Bind_1580 NC_010581.1 1781875 1782306 R PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain containing protein; signal-transduction protein complement(1781875..1782306) Beijerinckia indica subsp. indica ATCC 9039 6201173 YP_001832702.1 CDS Bind_1581 NC_010581.1 1782586 1783353 R KEGG: rpe:RPE_2658 prepilin-type cleavage/methylation-like protein; hypothetical protein complement(1782586..1783353) Beijerinckia indica subsp. indica ATCC 9039 6200760 YP_001832703.1 CDS Bind_1582 NC_010581.1 1783373 1784002 R KEGG: rpe:RPE_2659 prepilin-type cleavage/methylation-like protein; hypothetical protein complement(1783373..1784002) Beijerinckia indica subsp. indica ATCC 9039 6201020 YP_001832704.1 CDS Bind_1583 NC_010581.1 1783999 1784484 R KEGG: rpe:RPE_2660 putative general secretion pathway protein H precursor; putative general secretion pathway protein H complement(1783999..1784484) Beijerinckia indica subsp. indica ATCC 9039 6201339 YP_001832705.1 CDS Bind_1584 NC_010581.1 1784478 1784978 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rpe:RPE_2661 general secretion pathway protein G; general secretion pathway protein G complement(1784478..1784978) Beijerinckia indica subsp. indica ATCC 9039 6199858 YP_001832706.1 CDS Bind_1585 NC_010581.1 1785063 1786259 R PFAM: type II secretion system protein; KEGG: rpe:RPE_2662 type II secretion system protein; type II secretion system protein complement(1785063..1786259) Beijerinckia indica subsp. indica ATCC 9039 6200947 YP_001832707.1 CDS Bind_1586 NC_010581.1 1786460 1788076 R PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: rpe:RPE_2663 type II secretion system protein E; type II secretion system protein E complement(1786460..1788076) Beijerinckia indica subsp. indica ATCC 9039 6200344 YP_001832708.1 CDS Bind_1587 NC_010581.1 1788396 1790801 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpe:RPE_2669 general secretion pathway protein D; general secretion pathway protein D 1788396..1790801 Beijerinckia indica subsp. indica ATCC 9039 6200454 YP_001832709.1 CDS Bind_1588 NC_010581.1 1790811 1791506 D PFAM: peptidase A24A prepilin type IV; KEGG: rpe:RPE_2668 general secretion pathway protein O; peptidase A24A prepilin type IV 1790811..1791506 Beijerinckia indica subsp. indica ATCC 9039 6199914 YP_001832710.1 CDS Bind_1589 NC_010581.1 1791517 1792365 D KEGG: rpe:RPE_2667 hypothetical protein; hypothetical protein 1791517..1792365 Beijerinckia indica subsp. indica ATCC 9039 6199191 YP_001832711.1 CDS Bind_1590 NC_010581.1 1792373 1793440 D PFAM: Fimbrial assembly family protein; KEGG: rpe:RPE_2666 fimbrial assembly family protein; fimbrial assembly family protein 1792373..1793440 Beijerinckia indica subsp. indica ATCC 9039 6201288 YP_001832712.1 CDS Bind_1591 NC_010581.1 1793437 1794132 D KEGG: rpe:RPE_2665 hypothetical protein; hypothetical protein 1793437..1794132 Beijerinckia indica subsp. indica ATCC 9039 6199749 YP_001832713.1 CDS Bind_1592 NC_010581.1 1794129 1794572 D KEGG: bja:bll6012 hypothetical protein; hypothetical protein 1794129..1794572 Beijerinckia indica subsp. indica ATCC 9039 6200799 YP_001832714.1 CDS Bind_1593 NC_010581.1 1794655 1795287 D PFAM: isochorismatase hydrolase; KEGG: bbt:BBta_2415 nicotinamidase/pyrazinamidase; isochorismatase hydrolase 1794655..1795287 Beijerinckia indica subsp. indica ATCC 9039 6201272 YP_001832715.1 CDS Bind_1594 NC_010581.1 1795773 1797317 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: mlo:mlr2187 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 1795773..1797317 Beijerinckia indica subsp. indica ATCC 9039 6199909 YP_001832716.1 CDS Bind_1595 NC_010581.1 1797670 1799196 R PFAM: acyltransferase 3; KEGG: nar:Saro_1166 acyltransferase 3; acyltransferase 3 complement(1797670..1799196) Beijerinckia indica subsp. indica ATCC 9039 6199542 YP_001832717.1 CDS Bind_1596 NC_010581.1 1799336 1802815 R KEGG: rpe:RPE_2550 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(1799336..1802815) Beijerinckia indica subsp. indica ATCC 9039 6198805 YP_001832718.1 CDS Bind_1597 NC_010581.1 1803108 1803449 R KEGG: nve:NEMVE_v1g246176 predicted protein Pfam: RRM_1 PROSITE: GLY_RICH RRM; hypothetical protein complement(1803108..1803449) Beijerinckia indica subsp. indica ATCC 9039 6201079 YP_001832719.1 CDS Bind_1598 NC_010581.1 1803820 1804137 R hypothetical protein complement(1803820..1804137) Beijerinckia indica subsp. indica ATCC 9039 6199685 YP_001832720.1 CDS Bind_1599 NC_010581.1 1804269 1805054 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_1116 ABC transporter related; ABC transporter-like protein complement(1804269..1805054) Beijerinckia indica subsp. indica ATCC 9039 6200116 YP_001832721.1 CDS Bind_1600 NC_010581.1 1805054 1806211 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1525 putative ABC transport system, integral membrane protein; polar amino acid ABC transporter inner membrane subunit complement(1805054..1806211) Beijerinckia indica subsp. indica ATCC 9039 6201369 YP_001832722.1 CDS Bind_1601 NC_010581.1 1806214 1807389 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A1003 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; binding-protein-dependent transport system inner membrane protein complement(1806214..1807389) Beijerinckia indica subsp. indica ATCC 9039 6199465 YP_001832723.1 CDS Bind_1602 NC_010581.1 1807404 1808414 R TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bja:blr4446 ABC transporter amino acid-binding protein; cationic amino acid ABC transporter periplasmic binding protein complement(1807404..1808414) Beijerinckia indica subsp. indica ATCC 9039 6199807 YP_001832724.1 CDS Bind_1603 NC_010581.1 1808853 1810676 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: nha:Nham_0943 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 1808853..1810676 Beijerinckia indica subsp. indica ATCC 9039 6198873 YP_001832725.1 CDS Bind_1604 NC_010581.1 1810876 1812063 D TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase; cystathionine beta-lyase 1810876..1812063 Beijerinckia indica subsp. indica ATCC 9039 6200952 YP_001832726.1 CDS Bind_1605 NC_010581.1 1812188 1813009 D hypothetical protein 1812188..1813009 Beijerinckia indica subsp. indica ATCC 9039 6200897 YP_001832727.1 CDS Bind_1606 NC_010581.1 1813056 1813598 R PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_C_1598 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 complement(1813056..1813598) Beijerinckia indica subsp. indica ATCC 9039 6199680 YP_001832728.1 CDS Bind_1607 NC_010581.1 1814247 1815806 D KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 1814247..1815806 Beijerinckia indica subsp. indica ATCC 9039 6199794 YP_001832729.1 CDS Bind_1608 NC_010581.1 1816034 1816816 R KEGG: bra:BRADO4711 hypothetical protein; hypothetical protein complement(1816034..1816816) Beijerinckia indica subsp. indica ATCC 9039 6201024 YP_001832730.1 CDS Bind_1609 NC_010581.1 1816922 1817419 D hypothetical protein 1816922..1817419 Beijerinckia indica subsp. indica ATCC 9039 6200251 YP_001832731.1 CDS Bind_1611 NC_010581.1 1818078 1818491 D PFAM: protein of unknown function DUF983; KEGG: smd:Smed_1973 protein of unknown function DUF983; hypothetical protein 1818078..1818491 Beijerinckia indica subsp. indica ATCC 9039 6198811 YP_001832732.1 CDS Bind_1612 NC_010581.1 1818596 1820194 R TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: rle:pRL110285 putative acid phosphatase; acid phosphatase complement(1818596..1820194) Beijerinckia indica subsp. indica ATCC 9039 6201239 YP_001832733.1 CDS Bind_1613 NC_010581.1 1820462 1821736 D PFAM: Di-haem cytochrome c peroxidase; KEGG: bte:BTH_I2670 di-haem cytochrome c peroxidase family protein; di-heme cytochrome c peroxidase 1820462..1821736 Beijerinckia indica subsp. indica ATCC 9039 6200339 YP_001832734.1 CDS Bind_1614 NC_010581.1 1822069 1823112 D PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein; patatin 1822069..1823112 Beijerinckia indica subsp. indica ATCC 9039 6199203 YP_001832735.1 CDS Bind_1615 NC_010581.1 1823425 1824432 R PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family 25; glycoside hydrolase family protein complement(1823425..1824432) Beijerinckia indica subsp. indica ATCC 9039 6200906 YP_001832736.1 CDS Bind_1616 NC_010581.1 1824776 1826512 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1269 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1824776..1826512 Beijerinckia indica subsp. indica ATCC 9039 6200646 YP_001832737.1 CDS Bind_1617 NC_010581.1 1826523 1827857 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_1270 ABC transporter related; ABC transporter-like protein 1826523..1827857 Beijerinckia indica subsp. indica ATCC 9039 6201167 YP_001832738.1 CDS Bind_1618 NC_010581.1 1828215 1829129 D PFAM: glycosyl transferase family 2; KEGG: mac:MA2170 glycosyltransferase; glycosyl transferase family protein 1828215..1829129 Beijerinckia indica subsp. indica ATCC 9039 6200736 YP_001832739.1 CDS Bind_1619 NC_010581.1 1829140 1830585 R TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: bja:bll5251 putative transporter transmembrane protein; magnesium transporter complement(1829140..1830585) Beijerinckia indica subsp. indica ATCC 9039 6200867 YP_001832740.1 CDS Bind_1620 NC_010581.1 1830656 1831621 D PFAM: polysaccharide deacetylase; KEGG: azc:AZC_2836 polysaccharide deacetylase; polysaccharide deacetylase 1830656..1831621 Beijerinckia indica subsp. indica ATCC 9039 6200190 YP_001832741.1 CDS Bind_1621 NC_010581.1 1832423 1833142 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: rpa:RPA3169 lipoyltransferase; lipoate-protein ligase B 1832423..1833142 Beijerinckia indica subsp. indica ATCC 9039 6201525 YP_001832742.1 CDS Bind_1622 NC_010581.1 1833274 1833939 D hypothetical protein 1833274..1833939 Beijerinckia indica subsp. indica ATCC 9039 6199886 YP_001832743.1 CDS Bind_1623 NC_010581.1 1834026 1834463 R PFAM: regulatory protein MarR; KEGG: nwi:Nwi_2885 transcriptional regulatory protein, MarR family; MarR family transcriptional regulator complement(1834026..1834463) Beijerinckia indica subsp. indica ATCC 9039 6199956 YP_001832744.1 CDS Bind_1624 NC_010581.1 1834546 1835328 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc04054 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1834546..1835328 Beijerinckia indica subsp. indica ATCC 9039 6200201 YP_001832745.1 CDS Bind_1625 NC_010581.1 1835388 1835987 R KEGG: bra:BRADO6543 conserved hypothetical protein; putative signal peptide; putative signal peptide complement(1835388..1835987) Beijerinckia indica subsp. indica ATCC 9039 6199644 YP_001832746.1 CDS Bind_1626 NC_010581.1 1836309 1836797 R PFAM: protein of unknown function UPF0153; KEGG: rpd:RPD_1955 hypothetical protein; hypothetical protein complement(1836309..1836797) Beijerinckia indica subsp. indica ATCC 9039 6199585 YP_001832747.1 CDS Bind_1627 NC_010581.1 1837123 1839279 D KEGG: mex:Mext_0928 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 1837123..1839279 Beijerinckia indica subsp. indica ATCC 9039 6199656 YP_001832748.1 CDS Bind_1628 NC_010581.1 1839769 1840026 D KEGG: sit:TM1040_0419 hypothetical protein; hypothetical protein 1839769..1840026 Beijerinckia indica subsp. indica ATCC 9039 6198863 YP_001832749.1 CDS Bind_1629 NC_010581.1 1840039 1840542 D PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1615 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1840039..1840542 Beijerinckia indica subsp. indica ATCC 9039 6198385 YP_001832750.1 CDS Bind_1630 NC_010581.1 1840688 1841962 R KEGG: rle:RL0945 putative 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(1840688..1841962) Beijerinckia indica subsp. indica ATCC 9039 6200549 YP_001832751.1 CDS Bind_1631 NC_010581.1 1842520 1844916 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rle:pRL70183 hypothetical protein; hypothetical protein 1842520..1844916 Beijerinckia indica subsp. indica ATCC 9039 6199665 YP_001832752.1 CDS Bind_1632 NC_010581.1 1845062 1845628 D PFAM: protein of unknown function DUF1214; KEGG: nha:Nham_1402 protein of unknown function DUF1214; hypothetical protein 1845062..1845628 Beijerinckia indica subsp. indica ATCC 9039 6200330 YP_001832753.1 CDS Bind_1633 NC_010581.1 1845625 1846254 D KEGG: mex:Mext_0926 hypothetical protein; hypothetical protein 1845625..1846254 Beijerinckia indica subsp. indica ATCC 9039 6199594 YP_001832754.1 CDS Bind_1634 NC_010581.1 1847259 1847492 D hypothetical protein 1847259..1847492 Beijerinckia indica subsp. indica ATCC 9039 6199874 YP_001832755.1 CDS Bind_1635 NC_010581.1 1847579 1847962 R KEGG: mex:Mext_4416 hypothetical protein; hypothetical protein complement(1847579..1847962) Beijerinckia indica subsp. indica ATCC 9039 6200345 YP_001832756.1 CDS Bind_1636 NC_010581.1 1848185 1849765 D PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mex:Mext_4415 protein of unknown function DUF853 NPT hydrolase putative; hypothetical protein 1848185..1849765 Beijerinckia indica subsp. indica ATCC 9039 6201170 YP_001832757.1 CDS Bind_1637 NC_010581.1 1849848 1851467 D PFAM: phosphate transporter; KEGG: bra:BRADO6359 putative low-affinity inorganic phosphate transport protein (PiT family); phosphate transporter 1849848..1851467 Beijerinckia indica subsp. indica ATCC 9039 6200481 YP_001832758.1 CDS Bind_1638 NC_010581.1 1851781 1852611 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpa:RPA1859 hypothetical protein; peptidoglycan binding domain-containing protein complement(1851781..1852611) Beijerinckia indica subsp. indica ATCC 9039 6200753 YP_001832759.1 CDS Bind_1639 NC_010581.1 1852643 1854394 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_1779 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(1852643..1854394) Beijerinckia indica subsp. indica ATCC 9039 6199903 YP_001832760.1 CDS Bind_1640 NC_010581.1 1854711 1855112 D hypothetical protein 1854711..1855112 Beijerinckia indica subsp. indica ATCC 9039 6199776 YP_001832761.1 CDS Bind_1641 NC_010581.1 1855543 1855968 D PFAM: Fe-S metabolism associated SufE; KEGG: nha:Nham_2625 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1855543..1855968 Beijerinckia indica subsp. indica ATCC 9039 6199235 YP_001832762.1 CDS Bind_1642 NC_010581.1 1856124 1856540 R PFAM: ROSMUCR transcriptional regulator; KEGG: azc:AZC_1086 putative transcriptional regulator; MucR family transcriptional regulator complement(1856124..1856540) Beijerinckia indica subsp. indica ATCC 9039 6200462 YP_001832763.1 CDS Bind_1643 NC_010581.1 1856920 1857360 D TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: pla:Plav_0845 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 1856920..1857360 Beijerinckia indica subsp. indica ATCC 9039 6198766 YP_001832764.1 CDS Bind_1644 NC_010581.1 1857557 1859662 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: xau:Xaut_2839 oligopeptidase B; oligopeptidase B 1857557..1859662 Beijerinckia indica subsp. indica ATCC 9039 6198859 YP_001832765.1 CDS Bind_1645 NC_010581.1 1859761 1860942 R KEGG: azc:AZC_3052 hypothetical protein; hypothetical protein complement(1859761..1860942) Beijerinckia indica subsp. indica ATCC 9039 6198510 YP_001832766.1 CDS Bind_1646 NC_010581.1 1861702 1862301 D PFAM: manganese and iron superoxide dismutase; KEGG: xau:Xaut_3319 superoxide dismutase; superoxide dismutase 1861702..1862301 Beijerinckia indica subsp. indica ATCC 9039 6199557 YP_001832767.1 CDS Bind_1647 NC_010581.1 1862298 1863161 R PFAM: YdjC family protein; KEGG: azo:azo0748 cellobiose phosphorylase; hypothetical protein complement(1862298..1863161) Beijerinckia indica subsp. indica ATCC 9039 6201137 YP_001832768.1 CDS Bind_1648 NC_010581.1 1863983 1864618 R KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; hypothetical protein complement(1863983..1864618) Beijerinckia indica subsp. indica ATCC 9039 6200520 YP_001832769.1 CDS Bind_1649 NC_010581.1 1864754 1865332 R PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator complement(1864754..1865332) Beijerinckia indica subsp. indica ATCC 9039 6200999 YP_001832770.1 CDS Bind_1650 NC_010581.1 1866200 1867195 D PFAM: glycosyl transferase family 2; KEGG: syn:sll0501 putative glycosyl transferase; glycosyl transferase family protein 1866200..1867195 Beijerinckia indica subsp. indica ATCC 9039 6199826 YP_001832771.1 CDS Bind_1651 NC_010581.1 1867273 1868802 D TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral membrane protein MviN; integral membrane protein MviN 1867273..1868802 Beijerinckia indica subsp. indica ATCC 9039 6199640 YP_001832772.1 CDS Bind_1652 NC_010581.1 1869227 1869436 D KEGG: son:SO_A0168 ISSo9, nucleotidyltransferase domain protein; ISSo9, nucleotidyltransferase domain-containing protein 1869227..1869436 Beijerinckia indica subsp. indica ATCC 9039 6199991 YP_001832773.1 CDS Bind_1653 NC_010581.1 1869433 1869813 D PFAM: protein of unknown function DUF86; KEGG: mfa:Mfla_2451 protein of unknown function DUF86; hypothetical protein 1869433..1869813 Beijerinckia indica subsp. indica ATCC 9039 6200216 YP_001832774.1 CDS Bind_1654 NC_010581.1 1870025 1871692 R PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase complement(1870025..1871692) Beijerinckia indica subsp. indica ATCC 9039 6200473 YP_001832775.1 CDS Bind_1655 NC_010581.1 1871993 1873378 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: oan:Oant_0136 peptidase M20; hypothetical protein complement(1871993..1873378) Beijerinckia indica subsp. indica ATCC 9039 6200882 YP_001832776.1 CDS Bind_1656 NC_010581.1 1873553 1873891 D PFAM: protein of unknown function DUF1491; KEGG: rpe:RPE_1874 protein of unknown function DUF1491; hypothetical protein 1873553..1873891 Beijerinckia indica subsp. indica ATCC 9039 6201122 YP_001832777.1 CDS Bind_1657 NC_010581.1 1873903 1875129 R PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: ret:RHE_CH00450 hypothetical protein; hypothetical protein complement(1873903..1875129) Beijerinckia indica subsp. indica ATCC 9039 6201345 YP_001832778.1 CDS Bind_1658 NC_010581.1 1875325 1876002 D PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I 1875325..1876002 Beijerinckia indica subsp. indica ATCC 9039 6199770 YP_001832779.1 CDS Bind_1659 NC_010581.1 1876007 1876495 R KEGG: mpt:Mpe_A2419 MxaD protein; MxaD protein complement(1876007..1876495) Beijerinckia indica subsp. indica ATCC 9039 6199677 YP_001832780.1 CDS Bind_1660 NC_010581.1 1876615 1877787 R PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II; class I and II aminotransferase complement(1876615..1877787) Beijerinckia indica subsp. indica ATCC 9039 6200561 YP_001832781.1 CDS Bind_1661 NC_010581.1 1878378 1879205 D PFAM: DSBA oxidoreductase; KEGG: bja:bll4294 outer membrane protein; DSBA oxidoreductase 1878378..1879205 Beijerinckia indica subsp. indica ATCC 9039 6200802 YP_001832782.1 CDS Bind_1662 NC_010581.1 1879482 1880219 D KEGG: bra:BRADO3597 hypothetical protein; hypothetical protein 1879482..1880219 Beijerinckia indica subsp. indica ATCC 9039 6199345 YP_001832783.1 CDS Bind_1663 NC_010581.1 1880458 1881948 R PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region; amino acid permease-associated protein complement(1880458..1881948) Beijerinckia indica subsp. indica ATCC 9039 6201481 YP_001832784.1 CDS Bind_1664 NC_010581.1 1882268 1883536 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase; amine oxidase 1882268..1883536 Beijerinckia indica subsp. indica ATCC 9039 6200081 YP_001832785.1 CDS Bind_1665 NC_010581.1 1883650 1884906 D PFAM: protein of unknown function DUF482; KEGG: azc:AZC_2321 hypothetical protein; hypothetical protein 1883650..1884906 Beijerinckia indica subsp. indica ATCC 9039 6201116 YP_001832786.1 CDS Bind_1666 NC_010581.1 1884961 1885389 D PFAM: histidine triad (HIT) protein; KEGG: xau:Xaut_3536 histidine triad (HIT) protein; histidine triad (HIT) protein 1884961..1885389 Beijerinckia indica subsp. indica ATCC 9039 6200179 YP_001832787.1 CDS Bind_1667 NC_010581.1 1885504 1887993 R KEGG: mex:Mext_4802 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(1885504..1887993) Beijerinckia indica subsp. indica ATCC 9039 6198711 YP_001832788.1 CDS Bind_1668 NC_010581.1 1888007 1888420 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: xau:Xaut_4537 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(1888007..1888420) Beijerinckia indica subsp. indica ATCC 9039 6200578 YP_001832789.1 CDS Bind_1669 NC_010581.1 1889325 1889666 R KEGG: mlo:mll0665 hypothetical protein; hypothetical protein complement(1889325..1889666) Beijerinckia indica subsp. indica ATCC 9039 6200484 YP_001832790.1 CDS Bind_1670 NC_010581.1 1889954 1891645 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: bra:BRADO4549 putative D-alanyl-D-alanine carboxypeptidase (peptidase S11)(dd-carboxypeptidase); serine-type D-Ala-D-Ala carboxypeptidase 1889954..1891645 Beijerinckia indica subsp. indica ATCC 9039 6199525 YP_001832791.1 CDS Bind_1671 NC_010581.1 1891935 1892687 R PFAM: heat shock protein DnaJ domain protein; KEGG: rpe:RPE_3408 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(1891935..1892687) Beijerinckia indica subsp. indica ATCC 9039 6199120 YP_001832792.1 CDS Bind_1672 NC_010581.1 1892819 1893472 R PFAM: Glutathione S-transferase domain; KEGG: rru:Rru_A3193 glutathione S-transferase-like; glutathione S-transferase domain-containing protein complement(1892819..1893472) Beijerinckia indica subsp. indica ATCC 9039 6201730 YP_001832793.1 CDS Bind_1673 NC_010581.1 1893533 1894387 R PFAM: protein of unknown function DUF218; KEGG: bra:BRADO4236 hypothetical protein; hypothetical protein complement(1893533..1894387) Beijerinckia indica subsp. indica ATCC 9039 6201243 YP_001832794.1 CDS Bind_1674 NC_010581.1 1894519 1894737 R PFAM: protein of unknown function DUF329; KEGG: xau:Xaut_2724 protein of unknown function DUF329; hypothetical protein complement(1894519..1894737) Beijerinckia indica subsp. indica ATCC 9039 6199763 YP_001832795.1 CDS Bind_1675 NC_010581.1 1894850 1895536 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bbt:BBta_0900 Maf-like protein; maf protein complement(1894850..1895536) Beijerinckia indica subsp. indica ATCC 9039 6200983 YP_001832796.1 CDS infA NC_010581.1 1895565 1895783 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1895565..1895783) Beijerinckia indica subsp. indica ATCC 9039 6201290 YP_001832797.1 CDS Bind_1677 NC_010581.1 1896083 1896751 D PFAM: O-methyltransferase family 3; KEGG: bwe:BcerKBAB4_1827 O-methyltransferase family 3; O-methyltransferase family protein 1896083..1896751 Beijerinckia indica subsp. indica ATCC 9039 6200352 YP_001832798.1 CDS Bind_1678 NC_010581.1 1896954 1897790 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1896954..1897790) Beijerinckia indica subsp. indica ATCC 9039 6200138 YP_001832799.1 CDS Bind_1679 NC_010581.1 1898032 1898730 R KEGG: bja:blr3796 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase complement(1898032..1898730) Beijerinckia indica subsp. indica ATCC 9039 6199819 YP_001832800.1 CDS Bind_1680 NC_010581.1 1899873 1900184 D KEGG: bbt:BBta_6628 hypothetical protein; hypothetical protein 1899873..1900184 Beijerinckia indica subsp. indica ATCC 9039 6199892 YP_001832801.1 CDS Bind_1681 NC_010581.1 1900123 1900494 D PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_2943 putative phage-related transcriptional regulator; XRE family transcriptional regulator 1900123..1900494 Beijerinckia indica subsp. indica ATCC 9039 6199520 YP_001832802.1 CDS Bind_1682 NC_010581.1 1900586 1901503 R KEGG: zmo:ZMO0744 hypothetical protein; hypothetical protein complement(1900586..1901503) Beijerinckia indica subsp. indica ATCC 9039 6199806 YP_001832803.1 CDS Bind_1683 NC_010581.1 1902213 1903718 D PFAM: amino acid permease-associated region; KEGG: mbn:Mboo_1999 amino acid permease-associated region; amino acid permease-associated protein 1902213..1903718 Beijerinckia indica subsp. indica ATCC 9039 6199882 YP_001832804.1 CDS Bind_1684 NC_010581.1 1903765 1904046 D hypothetical protein 1903765..1904046 Beijerinckia indica subsp. indica ATCC 9039 6199502 YP_001832805.1 CDS Bind_1685 NC_010581.1 1904182 1904547 D KEGG: mca:MCA1026 hypothetical protein; hypothetical protein 1904182..1904547 Beijerinckia indica subsp. indica ATCC 9039 6199256 YP_001832806.1 CDS Bind_1686 NC_010581.1 1904938 1905573 D PFAM: heat shock protein DnaJ domain protein; KEGG: mlo:mll4676 contains weak similarity to thioredoxin reductase; heat shock protein DnaJ domain-containing protein 1904938..1905573 Beijerinckia indica subsp. indica ATCC 9039 6200143 YP_001832807.1 CDS Bind_1687 NC_010581.1 1906090 1907031 D PFAM: Exopolysaccharide synthesis ExoD; KEGG: rru:Rru_A2869 exopolysaccharide synthesis, ExoD; exopolysaccharide synthesis ExoD 1906090..1907031 Beijerinckia indica subsp. indica ATCC 9039 6199247 YP_001832808.1 CDS Bind_1688 NC_010581.1 1907034 1907363 D hypothetical protein 1907034..1907363 Beijerinckia indica subsp. indica ATCC 9039 6200100 YP_001832809.1 CDS Bind_1689 NC_010581.1 1907450 1909267 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: drm:Dred_1995 sulphate transporter; sulfate transporter complement(1907450..1909267) Beijerinckia indica subsp. indica ATCC 9039 6199969 YP_001832810.1 CDS Bind_1690 NC_010581.1 1909415 1910446 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: nha:Nham_3560 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein complement(1909415..1910446) Beijerinckia indica subsp. indica ATCC 9039 6199045 YP_001832811.1 CDS Bind_1691 NC_010581.1 1910635 1913412 R PFAM: E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein complement(1910635..1913412) Beijerinckia indica subsp. indica ATCC 9039 6200224 YP_001832812.1 CDS Bind_1692 NC_010581.1 1913710 1914186 D PFAM: OsmC family protein; KEGG: acr:Acry_2755 OsmC family protein; OsmC family protein 1913710..1914186 Beijerinckia indica subsp. indica ATCC 9039 6200412 YP_001832813.1 CDS Bind_1693 NC_010581.1 1914627 1915439 D PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0593 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1914627..1915439 Beijerinckia indica subsp. indica ATCC 9039 6198203 YP_001832814.1 CDS Bind_1694 NC_010581.1 1915452 1916285 D PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0592 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1915452..1916285 Beijerinckia indica subsp. indica ATCC 9039 6200949 YP_001832815.1 CDS Bind_1695 NC_010581.1 1916496 1919165 R PFAM: E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein complement(1916496..1919165) Beijerinckia indica subsp. indica ATCC 9039 6200280 YP_001832816.1 CDS Bind_1696 NC_010581.1 1919396 1920409 R PFAM: ribonuclease T2; KEGG: rru:Rru_A3450 ribonuclease T2; ribonuclease T2 complement(1919396..1920409) Beijerinckia indica subsp. indica ATCC 9039 6199167 YP_001832817.1 CDS Bind_1698 NC_010581.1 1921013 1921315 D KEGG: bbt:BBta_2494 putative exported protein of unknown function; hypothetical protein 1921013..1921315 Beijerinckia indica subsp. indica ATCC 9039 6199307 YP_001832818.1 CDS Bind_1699 NC_010581.1 1921343 1921633 D KEGG: bja:bll5766 hypothetical protein; hypothetical protein 1921343..1921633 Beijerinckia indica subsp. indica ATCC 9039 6199313 YP_001832819.1 CDS Bind_1700 NC_010581.1 1922077 1923105 R hypothetical protein complement(1922077..1923105) Beijerinckia indica subsp. indica ATCC 9039 6200175 YP_001832820.1 CDS Bind_1701 NC_010581.1 1923416 1923691 D hypothetical protein 1923416..1923691 Beijerinckia indica subsp. indica ATCC 9039 6201350 YP_001832821.1 CDS Bind_1702 NC_010581.1 1923869 1924153 R TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: smd:Smed_4342 cell division topological specificity factor MinE; cell division topological specificity factor MinE complement(1923869..1924153) Beijerinckia indica subsp. indica ATCC 9039 6200119 YP_001832822.1 CDS Bind_1703 NC_010581.1 1924150 1924968 R TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: acr:Acry_1991 septum site-determining protein MinD; septum site-determining protein MinD complement(1924150..1924968) Beijerinckia indica subsp. indica ATCC 9039 6201009 YP_001832823.1 CDS Bind_1704 NC_010581.1 1925078 1925812 R TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: bmb:BruAb2_0860 septum formation inhibitor; septum site-determining protein MinC complement(1925078..1925812) Beijerinckia indica subsp. indica ATCC 9039 6201115 YP_001832824.1 CDS Bind_1705 NC_010581.1 1925989 1926501 R PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein; flavin reductase domain-containing protein complement(1925989..1926501) Beijerinckia indica subsp. indica ATCC 9039 6198798 YP_001832825.1 CDS Bind_1706 NC_010581.1 1926796 1927980 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I1400 major facilitator family transporter; major facilitator transporter complement(1926796..1927980) Beijerinckia indica subsp. indica ATCC 9039 6198978 YP_001832826.1 CDS Bind_1707 NC_010581.1 1928176 1928460 R KEGG: nar:Saro_2521 protein of unknown function DUF1476; hypothetical protein complement(1928176..1928460) Beijerinckia indica subsp. indica ATCC 9039 6201195 YP_001832827.1 CDS Bind_1708 NC_010581.1 1928659 1928871 R KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein complement(1928659..1928871) Beijerinckia indica subsp. indica ATCC 9039 6201731 YP_001832828.1 CDS Bind_1709 NC_010581.1 1929200 1930132 R KEGG: azc:AZC_3998 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(1929200..1930132) Beijerinckia indica subsp. indica ATCC 9039 6200967 YP_001832829.1 CDS Bind_1710 NC_010581.1 1930337 1930741 R KEGG: bbt:BBta_2974 hypothetical protein; hypothetical protein complement(1930337..1930741) Beijerinckia indica subsp. indica ATCC 9039 6200513 YP_001832830.1 CDS Bind_1711 NC_010581.1 1931548 1932219 R KEGG: bbt:BBta_1762 putative exported protein of unknown function; hypothetical protein complement(1931548..1932219) Beijerinckia indica subsp. indica ATCC 9039 6198977 YP_001832831.1 CDS Bind_1712 NC_010581.1 1932431 1934509 D KEGG: mex:Mext_2878 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 1932431..1934509 Beijerinckia indica subsp. indica ATCC 9039 6199164 YP_001832832.1 CDS Bind_1713 NC_010581.1 1934514 1935110 D TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1934514..1935110 Beijerinckia indica subsp. indica ATCC 9039 6199575 YP_001832833.1 CDS Bind_1714 NC_010581.1 1935148 1935399 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mex:Mext_2876 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 1935148..1935399 Beijerinckia indica subsp. indica ATCC 9039 6200864 YP_001832834.1 CDS Bind_1715 NC_010581.1 1935404 1935883 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis MoaE protein 1935404..1935883 Beijerinckia indica subsp. indica ATCC 9039 6199666 YP_001832835.1 CDS Bind_1716 NC_010581.1 1936308 1938269 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: xau:Xaut_4224 surface antigen (D15); surface antigen (D15) 1936308..1938269 Beijerinckia indica subsp. indica ATCC 9039 6198818 YP_001832836.1 CDS Bind_1717 NC_010581.1 1938266 1942537 D PFAM: protein of unknown function DUF490; KEGG: xau:Xaut_4225 protein of unknown function DUF490; hypothetical protein 1938266..1942537 Beijerinckia indica subsp. indica ATCC 9039 6199582 YP_001832837.1 CDS Bind_1718 NC_010581.1 1942528 1943082 R KEGG: pla:Plav_0662 putative DNA topology modulation protein FlaR; putative DNA topology modulation protein FlaR complement(1942528..1943082) Beijerinckia indica subsp. indica ATCC 9039 6198442 YP_001832838.1 CDS Bind_1719 NC_010581.1 1943108 1943872 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mag:amb0238 transcriptional regulator; GntR family transcriptional regulator complement(1943108..1943872) Beijerinckia indica subsp. indica ATCC 9039 6200624 YP_001832839.1 CDS Bind_1720 NC_010581.1 1944057 1945052 R PFAM: putative sugar-binding domain protein; KEGG: atc:AGR_L_843 operon regulator; DeoR family transcriptional regulator complement(1944057..1945052) Beijerinckia indica subsp. indica ATCC 9039 6199692 YP_001832840.1 CDS Bind_1721 NC_010581.1 1945332 1946675 D PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase; hydroxypyruvate reductase 1945332..1946675 Beijerinckia indica subsp. indica ATCC 9039 6198524 YP_001832841.1 CDS Bind_1722 NC_010581.1 1946679 1947287 D PFAM: lipolytic protein G-D-S-L family; KEGG: ava:Ava_3904 lipolytic enzyme, G-D-S-L; GDSL family lipase 1946679..1947287 Beijerinckia indica subsp. indica ATCC 9039 6201331 YP_001832842.1 CDS Bind_1723 NC_010581.1 1947590 1950328 R TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase; valyl-tRNA synthetase complement(1947590..1950328) Beijerinckia indica subsp. indica ATCC 9039 6198939 YP_001832843.1 CDS Bind_1724 NC_010581.1 1950821 1951252 R KEGG: nwi:Nwi_1435 hypothetical protein; hypothetical protein complement(1950821..1951252) Beijerinckia indica subsp. indica ATCC 9039 6198957 YP_001832844.1 CDS Bind_1725 NC_010581.1 1951672 1953141 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(1951672..1953141) Beijerinckia indica subsp. indica ATCC 9039 6200870 YP_001832845.1 CDS Bind_1726 NC_010581.1 1954038 1954775 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: xau:Xaut_4234 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(1954038..1954775) Beijerinckia indica subsp. indica ATCC 9039 6199848 YP_001832846.1 CDS Bind_1727 NC_010581.1 1955122 1955448 D hypothetical protein 1955122..1955448 Beijerinckia indica subsp. indica ATCC 9039 6200413 YP_001832847.1 CDS Bind_1728 NC_010581.1 1955432 1955998 D PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll6511 acetyltransferase; N-acetyltransferase GCN5 1955432..1955998 Beijerinckia indica subsp. indica ATCC 9039 6199405 YP_001832848.1 CDS Bind_1729 NC_010581.1 1956084 1956680 D PFAM: dihydrofolate reductase region; KEGG: xau:Xaut_1420 dihydrofolate reductase; dihydrofolate reductase 1956084..1956680 Beijerinckia indica subsp. indica ATCC 9039 6200534 YP_001832849.1 CDS Bind_1730 NC_010581.1 1956760 1957929 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rpa:RPA3491 putative protease subunit HflK; HflK protein 1956760..1957929 Beijerinckia indica subsp. indica ATCC 9039 6199786 YP_001832850.1 CDS Bind_1731 NC_010581.1 1957926 1958813 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: xau:Xaut_1663 HflC protein; HflC protein 1957926..1958813 Beijerinckia indica subsp. indica ATCC 9039 6201154 YP_001832851.1 CDS Bind_1732 NC_010581.1 1958879 1959607 R KEGG: gdi:GDI3686 hypothetical protein; hypothetical protein complement(1958879..1959607) Beijerinckia indica subsp. indica ATCC 9039 6200217 YP_001832852.1 CDS Bind_1733 NC_010581.1 1960109 1961677 D KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1960109..1961677 Beijerinckia indica subsp. indica ATCC 9039 6199643 YP_001832853.1 CDS Bind_1734 NC_010581.1 1961925 1962992 R PFAM: Patatin; KEGG: bam:Bamb_5833 patatin; patatin complement(1961925..1962992) Beijerinckia indica subsp. indica ATCC 9039 6200025 YP_001832854.1 CDS Bind_1735 NC_010581.1 1963045 1964739 R PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_PE00049 adenylate cyclase protein; adenylate/guanylate cyclase complement(1963045..1964739) Beijerinckia indica subsp. indica ATCC 9039 6199789 YP_001832855.1 CDS Bind_1736 NC_010581.1 1964944 1965129 R hypothetical protein complement(1964944..1965129) Beijerinckia indica subsp. indica ATCC 9039 6200808 YP_001832856.1 CDS groES NC_010581.1 1965380 1965667 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1965380..1965667 Beijerinckia indica subsp. indica ATCC 9039 6200494 YP_001832857.1 CDS Bind_1738 NC_010581.1 1965730 1967376 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: azc:AZC_2312 chaperonin; chaperonin GroEL 1965730..1967376 Beijerinckia indica subsp. indica ATCC 9039 6200696 YP_001832858.1 CDS Bind_1739 NC_010581.1 1967746 1968114 D PFAM: histone family protein DNA-binding protein; KEGG: xau:Xaut_4386 integration host factor, alpha subunit; histone family protein DNA-binding protein 1967746..1968114 Beijerinckia indica subsp. indica ATCC 9039 6201353 YP_001832859.1 CDS Bind_1740 NC_010581.1 1968556 1970694 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mex:Mext_4485 ABC transporter domain protein; ABC transporter 1968556..1970694 Beijerinckia indica subsp. indica ATCC 9039 6198734 YP_001832860.1 CDS Bind_1741 NC_010581.1 1970839 1971222 R KEGG: rpd:RPD_2521 hypothetical protein; hypothetical protein complement(1970839..1971222) Beijerinckia indica subsp. indica ATCC 9039 6201367 YP_001832861.1 CDS Bind_1742 NC_010581.1 1971971 1973176 R PFAM: ABC-2 type transporter; KEGG: mex:Mext_0566 ABC-2 type transporter; ABC-2 type transporter complement(1971971..1973176) Beijerinckia indica subsp. indica ATCC 9039 6199591 YP_001832862.1 CDS Bind_1743 NC_010581.1 1973178 1975931 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mex:Mext_0565 ABC transporter related; ABC transporter-like protein complement(1973178..1975931) Beijerinckia indica subsp. indica ATCC 9039 6199574 YP_001832863.1 CDS Bind_1744 NC_010581.1 1975941 1976993 R PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein; secretion protein HlyD family protein complement(1975941..1976993) Beijerinckia indica subsp. indica ATCC 9039 6199242 YP_001832864.1 CDS Bind_1745 NC_010581.1 1977212 1977475 R KEGG: rpa:RPA4109 hypothetical protein; hypothetical protein complement(1977212..1977475) Beijerinckia indica subsp. indica ATCC 9039 6201365 YP_001832865.1 CDS Bind_1746 NC_010581.1 1977580 1978209 R PFAM: regulatory protein TetR; KEGG: rpa:RPA2189 possible transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1977580..1978209) Beijerinckia indica subsp. indica ATCC 9039 6199787 YP_001832866.1 CDS Bind_1747 NC_010581.1 1978598 1978984 R KEGG: rpa:RPA3831 hypothetical protein; hypothetical protein complement(1978598..1978984) Beijerinckia indica subsp. indica ATCC 9039 6199756 YP_001832867.1 CDS Bind_1748 NC_010581.1 1979081 1979863 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azc:AZC_2866 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(1979081..1979863) Beijerinckia indica subsp. indica ATCC 9039 6201077 YP_001832868.1 CDS Bind_1749 NC_010581.1 1979876 1980802 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: azc:AZC_0931 putative 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(1979876..1980802) Beijerinckia indica subsp. indica ATCC 9039 6200300 YP_001832869.1 CDS Bind_1750 NC_010581.1 1980814 1982415 R PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mag:amb4437 dehydrogenase; electron-transferring-flavoprotein dehydrogenase complement(1980814..1982415) Beijerinckia indica subsp. indica ATCC 9039 6198886 YP_001832870.1 CDS Bind_1751 NC_010581.1 1982541 1983476 R PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mag:amb3229 electron transfer flavoprotein; electron transfer flavoprotein subunit alpha complement(1982541..1983476) Beijerinckia indica subsp. indica ATCC 9039 6199940 YP_001832871.1 CDS Bind_1752 NC_010581.1 1983478 1984227 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dar:Daro_1211 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit complement(1983478..1984227) Beijerinckia indica subsp. indica ATCC 9039 6198668 YP_001832872.1 CDS Bind_1753 NC_010581.1 1984278 1984796 R PFAM: thioesterase superfamily protein; KEGG: rru:Rru_A1307 thioesterase superfamily; thioesterase superfamily protein complement(1984278..1984796) Beijerinckia indica subsp. indica ATCC 9039 6200503 YP_001832873.1 CDS Bind_1754 NC_010581.1 1984824 1986608 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rru:Rru_A1308 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1984824..1986608) Beijerinckia indica subsp. indica ATCC 9039 6200409 YP_001832874.1 CDS Bind_1755 NC_010581.1 1986644 1988965 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rru:Rru_A1309 acetoacetyl-CoA reductase; 3-hydroxyacyl-CoA dehydrogenase complement(1986644..1988965) Beijerinckia indica subsp. indica ATCC 9039 6200795 YP_001832875.1 CDS Bind_1756 NC_010581.1 1988965 1990101 R KEGG: rru:Rru_A1310 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(1988965..1990101) Beijerinckia indica subsp. indica ATCC 9039 6200767 YP_001832876.1 CDS Bind_1757 NC_010581.1 1990144 1991808 R PFAM: AMP-dependent synthetase and ligase; KEGG: rru:Rru_A1312 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1990144..1991808) Beijerinckia indica subsp. indica ATCC 9039 6200282 YP_001832877.1 CDS Bind_1758 NC_010581.1 1991881 1993173 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rru:Rru_A1313 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein complement(1991881..1993173) Beijerinckia indica subsp. indica ATCC 9039 6200318 YP_001832878.1 CDS Bind_1759 NC_010581.1 1993646 1994662 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pau:PA14_37400 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 1993646..1994662 Beijerinckia indica subsp. indica ATCC 9039 6200488 YP_001832879.1 CDS Bind_1760 NC_010581.1 1994748 1995515 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pca:Pcar_1081 oxidoreductase, putative short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1994748..1995515) Beijerinckia indica subsp. indica ATCC 9039 6200936 YP_001832880.1 CDS Bind_1761 NC_010581.1 1995529 1996248 R PFAM: Carboxymuconolactone decarboxylase; KEGG: rle:RL2355 putative carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(1995529..1996248) Beijerinckia indica subsp. indica ATCC 9039 6200907 YP_001832881.1 CDS Bind_1763 NC_010581.1 1997421 1998656 D PFAM: acyltransferase 3; KEGG: cak:Caul_3692 acyltransferase 3; acyltransferase 3 1997421..1998656 Beijerinckia indica subsp. indica ATCC 9039 6201192 YP_001832882.1 CDS Bind_1765 NC_010581.1 1999352 1999690 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_3342 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1999352..1999690 Beijerinckia indica subsp. indica ATCC 9039 6199898 YP_001832883.1 CDS Bind_1766 NC_010581.1 1999878 2000549 R KEGG: dre:552915 dynein, axonemal, heavy polypeptide 9 like; hypothetical protein complement(1999878..2000549) Beijerinckia indica subsp. indica ATCC 9039 6199323 YP_001832884.1 CDS Bind_1767 NC_010581.1 2000987 2001976 D PFAM: aldo/keto reductase; KEGG: xau:Xaut_3336 aldo/keto reductase; aldo/keto reductase 2000987..2001976 Beijerinckia indica subsp. indica ATCC 9039 6199356 YP_001832885.1 CDS Bind_1768 NC_010581.1 2002005 2002412 R PFAM: protein of unknown function DUF1311; KEGG: mes:Meso_2486 protein of unknown function DUF1311; hypothetical protein complement(2002005..2002412) Beijerinckia indica subsp. indica ATCC 9039 6201306 YP_001832886.1 CDS Bind_1769 NC_010581.1 2002559 2003797 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase; amine oxidase complement(2002559..2003797) Beijerinckia indica subsp. indica ATCC 9039 6201347 YP_001832887.1 CDS Bind_1770 NC_010581.1 2003853 2004911 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_2420 D-isomer specific 2-hydroxyacid dehydrogenase family protein; alcohol dehydrogenase complement(2003853..2004911) Beijerinckia indica subsp. indica ATCC 9039 6201164 YP_001832888.1 CDS Bind_1771 NC_010581.1 2005263 2006156 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3337 transcriptional regulator, LysR family; LysR family transcriptional regulator 2005263..2006156 Beijerinckia indica subsp. indica ATCC 9039 6200239 YP_001832889.1 CDS Bind_1772 NC_010581.1 2006406 2009351 D KEGG: scl:sce2280 hypothetical WD-repeat protein alr2800; WD repeat-containing protein 2006406..2009351 Beijerinckia indica subsp. indica ATCC 9039 6201161 YP_001832890.1 CDS Bind_1773 NC_010581.1 2009514 2010773 R PFAM: N-acylglucosamine 2-epimerase; KEGG: rle:RL3363 putative mannose-6-phosphate isomerase; N-acylglucosamine 2-epimerase complement(2009514..2010773) Beijerinckia indica subsp. indica ATCC 9039 6199342 YP_001832891.1 CDS hisG NC_010581.1 2011050 2012027 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(2011050..2012027) Beijerinckia indica subsp. indica ATCC 9039 6199501 YP_001832892.1 CDS Bind_1775 NC_010581.1 2012027 2013166 R PFAM: tRNA synthetase class II (G H P and S); KEGG: bja:blr7524 ATP phosphoribosyltransferase regulatory subunit; tRNA synthetase class II (G H P and S) complement(2012027..2013166) Beijerinckia indica subsp. indica ATCC 9039 6201234 YP_001832893.1 CDS hisS NC_010581.1 2013291 2014793 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2013291..2014793) Beijerinckia indica subsp. indica ATCC 9039 6199119 YP_001832894.1 CDS Bind_1777 NC_010581.1 2015182 2016036 D KEGG: atc:AGR_C_4127 hypothetical protein; putative periplasmic ligand-binding sensor protein 2015182..2016036 Beijerinckia indica subsp. indica ATCC 9039 6199818 YP_001832895.1 CDS Bind_1778 NC_010581.1 2016552 2017991 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cak:Caul_0933 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2016552..2017991 Beijerinckia indica subsp. indica ATCC 9039 6199597 YP_001832896.1 CDS Bind_1779 NC_010581.1 2018103 2019053 R KEGG: azo:azo1501 hypothetical protein; hypothetical protein complement(2018103..2019053) Beijerinckia indica subsp. indica ATCC 9039 6200724 YP_001832897.1 CDS Bind_1780 NC_010581.1 2019127 2019882 R PFAM: protein of unknown function UPF0153; KEGG: mca:MCA0219 hypothetical protein; hypothetical protein complement(2019127..2019882) Beijerinckia indica subsp. indica ATCC 9039 6198794 YP_001832898.1 CDS Bind_1781 NC_010581.1 2020116 2020814 R PFAM: 2OG-Fe(II) oxygenase; KEGG: hne:HNE_1522 alkylated DNA repair protein AlkB; 2OG-Fe(II) oxygenase complement(2020116..2020814) Beijerinckia indica subsp. indica ATCC 9039 6200766 YP_001832899.1 CDS Bind_1782 NC_010581.1 2021266 2021505 R PFAM: protein of unknown function DUF1467; KEGG: bja:bsl4900 hypothetical protein; hypothetical protein complement(2021266..2021505) Beijerinckia indica subsp. indica ATCC 9039 6199893 YP_001832900.1 CDS Bind_1783 NC_010581.1 2022004 2022603 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2022004..2022603 Beijerinckia indica subsp. indica ATCC 9039 6200935 YP_001832901.1 CDS Bind_1784 NC_010581.1 2022677 2023057 R PFAM: protein of unknown function DUF971; KEGG: bcs:BCAN_A0971 protein of unknown function DUF971; hypothetical protein complement(2022677..2023057) Beijerinckia indica subsp. indica ATCC 9039 6201846 YP_001832902.1 CDS Bind_1785 NC_010581.1 2023172 2024227 D KEGG: xau:Xaut_1387 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2023172..2024227 Beijerinckia indica subsp. indica ATCC 9039 6201346 YP_001832903.1 CDS Bind_1786 NC_010581.1 2024406 2025491 R KEGG: bcs:BCAN_A0058 nucleotide-binding protein-like protein; hypothetical protein complement(2024406..2025491) Beijerinckia indica subsp. indica ATCC 9039 6200452 YP_001832904.1 CDS Bind_1787 NC_010581.1 2026010 2026855 D PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00118 probable amino acid ABC transporter, substrate-binding protein; extracellular solute-binding protein 2026010..2026855 Beijerinckia indica subsp. indica ATCC 9039 6199634 YP_001832905.1 CDS Bind_1788 NC_010581.1 2026970 2027845 D PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpb:RPB_3394 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2026970..2027845 Beijerinckia indica subsp. indica ATCC 9039 6200819 YP_001832906.1 CDS Bind_1789 NC_010581.1 2027924 2028424 R KEGG: mex:Mext_4236 hypothetical protein; hypothetical protein complement(2027924..2028424) Beijerinckia indica subsp. indica ATCC 9039 6201785 YP_001832907.1 CDS Bind_1790 NC_010581.1 2028430 2029494 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4237 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2028430..2029494) Beijerinckia indica subsp. indica ATCC 9039 6199509 YP_001832908.1 CDS Bind_1791 NC_010581.1 2029613 2030521 R PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849; hypothetical protein complement(2029613..2030521) Beijerinckia indica subsp. indica ATCC 9039 6200438 YP_001832909.1 CDS Bind_1792 NC_010581.1 2030661 2031131 D PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP; endoribonuclease L-PSP 2030661..2031131 Beijerinckia indica subsp. indica ATCC 9039 6198800 YP_001832910.1 CDS Bind_1793 NC_010581.1 2031131 2031880 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2031131..2031880 Beijerinckia indica subsp. indica ATCC 9039 6198758 YP_001832911.1 CDS Bind_1794 NC_010581.1 2032037 2033680 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: dps:DP2330 similar to indole-3-pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 2032037..2033680 Beijerinckia indica subsp. indica ATCC 9039 6198687 YP_001832912.1 CDS Bind_1795 NC_010581.1 2033732 2034421 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1064 ABC transporter related; ABC transporter-like protein complement(2033732..2034421) Beijerinckia indica subsp. indica ATCC 9039 6198874 YP_001832913.1 CDS Bind_1796 NC_010581.1 2034418 2035737 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_2428 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein complement(2034418..2035737) Beijerinckia indica subsp. indica ATCC 9039 6200493 YP_001832914.1 CDS Bind_1797 NC_010581.1 2035734 2037053 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(2035734..2037053) Beijerinckia indica subsp. indica ATCC 9039 6200401 YP_001832915.1 CDS Bind_1798 NC_010581.1 2037526 2039373 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: acr:Acry_2590 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2037526..2039373 Beijerinckia indica subsp. indica ATCC 9039 6198802 YP_001832916.1 CDS Bind_1799 NC_010581.1 2039421 2040914 R hypothetical protein complement(2039421..2040914) Beijerinckia indica subsp. indica ATCC 9039 6198626 YP_001832917.1 CDS Bind_1800 NC_010581.1 2041165 2042457 R PFAM: glycosyl transferase family 28; KEGG: gvi:glr3757 probable glucosyltransferase; glycosyl transferase family protein complement(2041165..2042457) Beijerinckia indica subsp. indica ATCC 9039 6199864 YP_001832918.1 CDS Bind_1801 NC_010581.1 2042593 2044428 R TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rpd:RPD_2618 D-fructose-6-phosphate amidotransferase; glucosamine--fructose-6-phosphate aminotransferase complement(2042593..2044428) Beijerinckia indica subsp. indica ATCC 9039 6200964 YP_001832919.1 CDS Bind_1802 NC_010581.1 2044580 2045938 R TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: xau:Xaut_4419 nucleotidyl transferase; UDP-N-acetylglucosamine pyrophosphorylase complement(2044580..2045938) Beijerinckia indica subsp. indica ATCC 9039 6201728 YP_001832920.1 CDS Bind_1803 NC_010581.1 2045935 2046204 R hypothetical protein complement(2045935..2046204) Beijerinckia indica subsp. indica ATCC 9039 6200553 YP_001832921.1 CDS mdoD NC_010581.1 2046342 2047952 D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 2046342..2047952 Beijerinckia indica subsp. indica ATCC 9039 6200535 YP_001832922.1 CDS Bind_1805 NC_010581.1 2047940 2050165 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2047940..2050165 Beijerinckia indica subsp. indica ATCC 9039 6201524 YP_001832923.1 CDS Bind_1806 NC_010581.1 2050694 2051521 D KEGG: lpf:lpl2472 hypothetical protein; hypothetical protein 2050694..2051521 Beijerinckia indica subsp. indica ATCC 9039 6199678 YP_001832924.1 CDS Bind_1807 NC_010581.1 2052139 2053515 D PFAM: cytochrome P450; KEGG: atc:AGR_C_2890 cytochrome P450 hydroxylase; cytochrome P450 2052139..2053515 Beijerinckia indica subsp. indica ATCC 9039 6198680 YP_001832925.1 CDS Bind_1808 NC_010581.1 2053633 2054319 R PFAM: Ion transport 2 domain protein; KEGG: ppd:Ppro_0413 ion transport 2 domain protein; Ion transport 2 domain-containing protein complement(2053633..2054319) Beijerinckia indica subsp. indica ATCC 9039 6201004 YP_001832926.1 CDS Bind_1809 NC_010581.1 2054620 2057298 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(2054620..2057298) Beijerinckia indica subsp. indica ATCC 9039 6199368 YP_001832927.1 CDS Bind_1810 NC_010581.1 2057528 2058124 R KEGG: mes:Meso_0149 hypothetical protein; hypothetical protein complement(2057528..2058124) Beijerinckia indica subsp. indica ATCC 9039 6199122 YP_001832928.1 CDS Bind_1811 NC_010581.1 2059384 2061312 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2059384..2061312 Beijerinckia indica subsp. indica ATCC 9039 6201246 YP_001832929.1 CDS Bind_1812 NC_010581.1 2061305 2061796 D hypothetical protein 2061305..2061796 Beijerinckia indica subsp. indica ATCC 9039 6200729 YP_001832930.1 CDS Bind_1813 NC_010581.1 2061806 2062576 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: xau:Xaut_4163 hemolysin A; hemolysin A 2061806..2062576 Beijerinckia indica subsp. indica ATCC 9039 6200861 YP_001832931.1 CDS Bind_1814 NC_010581.1 2062576 2063868 D KEGG: xau:Xaut_4164 putative RNA methyltransferase; putative RNA methyltransferase 2062576..2063868 Beijerinckia indica subsp. indica ATCC 9039 6200298 YP_001832932.1 CDS Bind_1815 NC_010581.1 2064093 2064548 D KEGG: rsq:Rsph17025_4208 hypothetical protein; hypothetical protein 2064093..2064548 Beijerinckia indica subsp. indica ATCC 9039 6199254 YP_001832933.1 CDS Bind_1816 NC_010581.1 2064611 2065552 R KEGG: mex:Mext_2318 hypothetical protein; hypothetical protein complement(2064611..2065552) Beijerinckia indica subsp. indica ATCC 9039 6200127 YP_001832934.1 CDS Bind_1817 NC_010581.1 2065539 2068004 R KEGG: cph:Cpha266_2437 hypothetical protein; hypothetical protein complement(2065539..2068004) Beijerinckia indica subsp. indica ATCC 9039 6200738 YP_001832935.1 CDS Bind_1818 NC_010581.1 2068501 2069127 D PFAM: nitroreductase; KEGG: bbt:BBta_5206 hypothetical protein; nitroreductase 2068501..2069127 Beijerinckia indica subsp. indica ATCC 9039 6198897 YP_001832936.1 CDS Bind_1819 NC_010581.1 2069268 2069573 R KEGG: rpa:RPA3602 hypothetical protein; hypothetical protein complement(2069268..2069573) Beijerinckia indica subsp. indica ATCC 9039 6199783 YP_001832937.1 CDS Bind_1820 NC_010581.1 2070387 2071778 R PFAM: Aldehyde Dehydrogenase_; KEGG: bbt:BBta_3039 putative succinate-semialdehyde dehydrogenase; aldehyde dehydrogenase complement(2070387..2071778) Beijerinckia indica subsp. indica ATCC 9039 6201080 YP_001832938.1 CDS Bind_1821 NC_010581.1 2071846 2072037 R hypothetical protein complement(2071846..2072037) Beijerinckia indica subsp. indica ATCC 9039 6200164 YP_001832939.1 CDS Bind_1822 NC_010581.1 2072827 2073894 D KEGG: cpv:cgd8_1100 NRAP like nucleolar RNA associated protein; hypothetical protein 2072827..2073894 Beijerinckia indica subsp. indica ATCC 9039 6200329 YP_001832940.1 CDS Bind_1824 NC_010581.1 2074465 2075088 R PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2774 putative glutathionine S-transferase; glutathione S-transferase domain-containing protein complement(2074465..2075088) Beijerinckia indica subsp. indica ATCC 9039 6198960 YP_001832941.1 CDS Bind_1825 NC_010581.1 2075228 2076064 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr1899 short chain dehydrogenase; short chain dehydrogenase complement(2075228..2076064) Beijerinckia indica subsp. indica ATCC 9039 6199511 YP_001832942.1 CDS Bind_1826 NC_010581.1 2076123 2076980 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0550 putative hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein complement(2076123..2076980) Beijerinckia indica subsp. indica ATCC 9039 6200761 YP_001832943.1 CDS Bind_1827 NC_010581.1 2077073 2077534 R PFAM: regulatory protein MarR; KEGG: mlo:mlr1898 probable transcriptional regulator; MarR family transcriptional regulator complement(2077073..2077534) Beijerinckia indica subsp. indica ATCC 9039 6200566 YP_001832944.1 CDS Bind_1828 NC_010581.1 2077577 2078458 R PFAM: NmrA family protein; KEGG: mlo:mlr1895 hypothetical protein; NmrA family protein complement(2077577..2078458) Beijerinckia indica subsp. indica ATCC 9039 6200436 YP_001832945.1 CDS Bind_1829 NC_010581.1 2078700 2079659 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1385 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2078700..2079659) Beijerinckia indica subsp. indica ATCC 9039 6198588 YP_001832946.1 CDS Bind_1830 NC_010581.1 2079759 2080502 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_C1384 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2079759..2080502 Beijerinckia indica subsp. indica ATCC 9039 6199578 YP_001832947.1 CDS Bind_1832 NC_010581.1 2082005 2083471 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bja:blr4890 hypothetical protein; hypothetical protein 2082005..2083471 Beijerinckia indica subsp. indica ATCC 9039 6199667 YP_001832948.1 CDS Bind_1833 NC_010581.1 2083888 2084772 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3852 putative transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2083888..2084772) Beijerinckia indica subsp. indica ATCC 9039 6200393 YP_001832949.1 CDS Bind_1834 NC_010581.1 2084932 2086059 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B1269 putative NADH-flavin oxidoreductase / NADH oxidase; NADH:flavin oxidoreductase 2084932..2086059 Beijerinckia indica subsp. indica ATCC 9039 6199510 YP_001832950.1 CDS Bind_1835 NC_010581.1 2086100 2087089 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1273 putative oxidoreductase; alcohol dehydrogenase 2086100..2087089 Beijerinckia indica subsp. indica ATCC 9039 6200435 YP_001832951.1 CDS Bind_1836 NC_010581.1 2087879 2090263 D KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 2087879..2090263 Beijerinckia indica subsp. indica ATCC 9039 6198454 YP_001832952.1 CDS Bind_1837 NC_010581.1 2090393 2092516 D KEGG: bte:BTH_I1762 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific 2090393..2092516 Beijerinckia indica subsp. indica ATCC 9039 6200497 YP_001832953.1 CDS Bind_1839 NC_010581.1 2093612 2094298 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fre:Franean1_2518 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2093612..2094298 Beijerinckia indica subsp. indica ATCC 9039 6200208 YP_001832954.1 CDS Bind_1840 NC_010581.1 2094587 2095528 R PFAM: RimK domain protein ATP-grasp; KEGG: ade:Adeh_2122 hypothetical protein; RimK domain-containing protein complement(2094587..2095528) Beijerinckia indica subsp. indica ATCC 9039 6200229 YP_001832955.1 CDS Bind_1841 NC_010581.1 2095555 2096055 R hypothetical protein complement(2095555..2096055) Beijerinckia indica subsp. indica ATCC 9039 6201081 YP_001832956.1 CDS Bind_1843 NC_010581.1 2096521 2097087 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_3834 redoxin domain protein; redoxin domain-containing protein complement(2096521..2097087) Beijerinckia indica subsp. indica ATCC 9039 6200655 YP_001832957.1 CDS Bind_1844 NC_010581.1 2097378 2098625 D PFAM: Methyltransferase type 11; KEGG: mag:amb2283 hypothetical protein; type 11 methyltransferase 2097378..2098625 Beijerinckia indica subsp. indica ATCC 9039 6199483 YP_001832958.1 CDS Bind_1845 NC_010581.1 2098706 2100460 D PFAM: Cephalosporin hydroxylase; KEGG: syw:SYNW0087 hypothetical protein; cephalosporin hydroxylase 2098706..2100460 Beijerinckia indica subsp. indica ATCC 9039 6198436 YP_001832959.1 CDS Bind_1846 NC_010581.1 2101023 2103578 D PFAM: TonB-dependent receptor; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 2101023..2103578 Beijerinckia indica subsp. indica ATCC 9039 6200820 YP_001832960.1 CDS Bind_1847 NC_010581.1 2104084 2105232 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: smd:Smed_5653 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 2104084..2105232 Beijerinckia indica subsp. indica ATCC 9039 6200545 YP_001832961.1 CDS Bind_1848 NC_010581.1 2105250 2106692 D KEGG: bbt:BBta_4836 hypothetical protein; hypothetical protein 2105250..2106692 Beijerinckia indica subsp. indica ATCC 9039 6198485 YP_001832962.1 CDS Bind_1849 NC_010581.1 2106799 2108157 D KEGG: bbt:BBta_4857 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 2106799..2108157 Beijerinckia indica subsp. indica ATCC 9039 6199649 YP_001832963.1 CDS Bind_1850 NC_010581.1 2108195 2108542 D KEGG: xau:Xaut_2769 hypothetical protein; hypothetical protein 2108195..2108542 Beijerinckia indica subsp. indica ATCC 9039 6199844 YP_001832964.1 CDS Bind_1851 NC_010581.1 2108597 2109955 D KEGG: bxe:Bxe_A2175 putative nitrilotriacetate monooxygenase component A, NtaA/SnaA/SoxA/DszA family; nitrilotriacetate monooxygenase component A 2108597..2109955 Beijerinckia indica subsp. indica ATCC 9039 6198744 YP_001832965.1 CDS Bind_1852 NC_010581.1 2109996 2110862 D PFAM: nitroreductase; KEGG: cau:Caur_3170 nitroreductase; nitroreductase 2109996..2110862 Beijerinckia indica subsp. indica ATCC 9039 6201482 YP_001832966.1 CDS Bind_1853 NC_010581.1 2110989 2112239 D PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: smd:Smed_5663 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 2110989..2112239 Beijerinckia indica subsp. indica ATCC 9039 6198662 YP_001832967.1 CDS Bind_1854 NC_010581.1 2112332 2113501 D PFAM: Luciferase-like monooxygenase; KEGG: atc:AGR_L_2763 hypothetical protein; luciferase-like monooxygenase 2112332..2113501 Beijerinckia indica subsp. indica ATCC 9039 6199816 YP_001832968.1 CDS Bind_1855 NC_010581.1 2113810 2114997 D KEGG: bvi:Bcep1808_6885 hypothetical protein; hypothetical protein 2113810..2114997 Beijerinckia indica subsp. indica ATCC 9039 6200591 YP_001832969.1 CDS Bind_1856 NC_010581.1 2115469 2116671 D PFAM: Patatin; KEGG: bja:blr2776 putative patatin-like phospholipase; patatin 2115469..2116671 Beijerinckia indica subsp. indica ATCC 9039 6199269 YP_001832970.1 CDS Bind_1857 NC_010581.1 2117253 2117492 D hypothetical protein 2117253..2117492 Beijerinckia indica subsp. indica ATCC 9039 6199590 YP_001832971.1 CDS Bind_1858 NC_010581.1 2117674 2119515 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: ret:RHE_CH00633 putative potassium-efflux system protein; sodium/hydrogen exchanger complement(2117674..2119515) Beijerinckia indica subsp. indica ATCC 9039 6201097 YP_001832972.1 CDS Bind_1859 NC_010581.1 2119623 2120480 R PFAM: UspA domain protein; KEGG: mfa:Mfla_2660 UspA; UspA domain-containing protein complement(2119623..2120480) Beijerinckia indica subsp. indica ATCC 9039 6200938 YP_001832973.1 CDS Bind_1860 NC_010581.1 2120809 2121579 D KEGG: bpd:BURPS668_3911 hypothetical protein; hypothetical protein 2120809..2121579 Beijerinckia indica subsp. indica ATCC 9039 6200574 YP_001832974.1 CDS Bind_1861 NC_010581.1 2122026 2122259 D hypothetical protein 2122026..2122259 Beijerinckia indica subsp. indica ATCC 9039 6201303 YP_001832975.1 CDS Bind_1862 NC_010581.1 2122342 2122611 D KEGG: xau:Xaut_0099 hypothetical protein; hypothetical protein 2122342..2122611 Beijerinckia indica subsp. indica ATCC 9039 6200768 YP_001832976.1 CDS Bind_1863 NC_010581.1 2122727 2123755 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_2814 putative exopolysaccharide regulatory protein; Sel1 domain-containing protein complement(2122727..2123755) Beijerinckia indica subsp. indica ATCC 9039 6201025 YP_001832977.1 CDS Bind_1864 NC_010581.1 2124129 2125541 D KEGG: nwi:Nwi_0986 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2124129..2125541 Beijerinckia indica subsp. indica ATCC 9039 6200071 YP_001832978.1 CDS Bind_1865 NC_010581.1 2125553 2126569 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bba:Bd0664 similar to lipase LipA; alpha/beta hydrolase domain-containing protein 2125553..2126569 Beijerinckia indica subsp. indica ATCC 9039 6200321 YP_001832979.1 CDS Bind_1866 NC_010581.1 2126705 2127697 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2126705..2127697 Beijerinckia indica subsp. indica ATCC 9039 6201374 YP_001832980.1 CDS Bind_1867 NC_010581.1 2127740 2128543 D KEGG: pha:PSHAa1036 hypothetical protein ; membrane protein; hypothetical protein 2127740..2128543 Beijerinckia indica subsp. indica ATCC 9039 6198767 YP_001832981.1 CDS Bind_1868 NC_010581.1 2128559 2129680 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2128559..2129680) Beijerinckia indica subsp. indica ATCC 9039 6198852 YP_001832982.1 CDS smpB NC_010581.1 2129732 2130208 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(2129732..2130208) Beijerinckia indica subsp. indica ATCC 9039 6201328 YP_001832983.1 CDS Bind_1870 NC_010581.1 2130219 2131112 R KEGG: rpb:RPB_2602 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(2130219..2131112) Beijerinckia indica subsp. indica ATCC 9039 6199279 YP_001832984.1 CDS Bind_1871 NC_010581.1 2131515 2133686 D PFAM: Lytic transglycosylase catalytic; KEGG: mex:Mext_3190 lytic transglycosylase catalytic; lytic transglycosylase 2131515..2133686 Beijerinckia indica subsp. indica ATCC 9039 6199553 YP_001832985.1 CDS Bind_1872 NC_010581.1 2133891 2134790 D PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_1013 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2133891..2134790 Beijerinckia indica subsp. indica ATCC 9039 6199759 YP_001832986.1 CDS Bind_1873 NC_010581.1 2135091 2136641 R PFAM: porin; KEGG: mex:Mext_3186 porin; porin complement(2135091..2136641) Beijerinckia indica subsp. indica ATCC 9039 6200851 YP_001832987.1 CDS Bind_1874 NC_010581.1 2137698 2138375 D KEGG: mex:Mext_2011 hypothetical protein; hypothetical protein 2137698..2138375 Beijerinckia indica subsp. indica ATCC 9039 6201114 YP_001832988.1 CDS Bind_1875 NC_010581.1 2138484 2139023 D KEGG: osa:4326983 Os01g0329300; hypothetical protein 2138484..2139023 Beijerinckia indica subsp. indica ATCC 9039 6201145 YP_001832989.1 CDS Bind_1876 NC_010581.1 2139267 2140037 D KEGG: xcc:XCC2874 hypothetical protein; hypothetical protein 2139267..2140037 Beijerinckia indica subsp. indica ATCC 9039 6201003 YP_001832990.1 CDS Bind_1877 NC_010581.1 2140541 2142028 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B complement(2140541..2142028) Beijerinckia indica subsp. indica ATCC 9039 6201083 YP_001832991.1 CDS gatA NC_010581.1 2142132 2143613 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(2142132..2143613) Beijerinckia indica subsp. indica ATCC 9039 6199894 YP_001832992.1 CDS Bind_1879 NC_010581.1 2143669 2143956 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: nha:Nham_2277 aspartyl/glutamyl-tRNA amidotransferase subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C complement(2143669..2143956) Beijerinckia indica subsp. indica ATCC 9039 6200863 YP_001832993.1 CDS Bind_1880 NC_010581.1 2144108 2144737 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: smd:Smed_1240 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 2144108..2144737 Beijerinckia indica subsp. indica ATCC 9039 6199785 YP_001832994.1 CDS Bind_1881 NC_010581.1 2144828 2145487 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: reh:H16_A0049 putative protein-S-isoprenylcysteine methyltransferase; isoprenylcysteine carboxyl methyltransferase 2144828..2145487 Beijerinckia indica subsp. indica ATCC 9039 6201804 YP_001832995.1 CDS Bind_1882 NC_010581.1 2145871 2147829 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; KEGG: pla:Plav_1935 integral membrane sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 2145871..2147829 Beijerinckia indica subsp. indica ATCC 9039 6200962 YP_001832996.1 CDS Bind_1883 NC_010581.1 2147826 2148578 D PFAM: response regulator receiver; KEGG: scl:sce5166 two component response regulator; response regulator receiver protein 2147826..2148578 Beijerinckia indica subsp. indica ATCC 9039 6199855 YP_001832997.1 CDS Bind_1884 NC_010581.1 2148575 2149744 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb2850 signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2148575..2149744 Beijerinckia indica subsp. indica ATCC 9039 6199912 YP_001832998.1 CDS Bind_1885 NC_010581.1 2149773 2151725 R PFAM: malate synthase; KEGG: aeh:Mlg_1646 malate synthase G; malate synthase complement(2149773..2151725) Beijerinckia indica subsp. indica ATCC 9039 6198688 YP_001832999.1 CDS Bind_1886 NC_010581.1 2151903 2152796 R hypothetical protein complement(2151903..2152796) Beijerinckia indica subsp. indica ATCC 9039 6198587 YP_001833000.1 CDS Bind_1887 NC_010581.1 2152992 2153375 D PFAM: regulatory protein ArsR; KEGG: stp:Strop_3509 regulatory protein, ArsR; ArsR family transcriptional regulator 2152992..2153375 Beijerinckia indica subsp. indica ATCC 9039 6199890 YP_001833001.1 CDS Bind_1888 NC_010581.1 2153368 2153595 D hypothetical protein 2153368..2153595 Beijerinckia indica subsp. indica ATCC 9039 6199992 YP_001833002.1 CDS Bind_1889 NC_010581.1 2153630 2153968 D KEGG: bch:Bcen2424_5421 hypothetical protein; hypothetical protein 2153630..2153968 Beijerinckia indica subsp. indica ATCC 9039 6199757 YP_001833003.1 CDS Bind_1890 NC_010581.1 2153976 2154407 D KEGG: pol:Bpro_0110 hypothetical protein; hypothetical protein 2153976..2154407 Beijerinckia indica subsp. indica ATCC 9039 6201152 YP_001833004.1 CDS Bind_1891 NC_010581.1 2154410 2154991 R PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase; carbonic anhydrase complement(2154410..2154991) Beijerinckia indica subsp. indica ATCC 9039 6199711 YP_001833005.1 CDS Bind_1892 NC_010581.1 2155165 2155896 R PFAM: regulatory protein TetR; KEGG: kra:Krad_0136 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2155165..2155896) Beijerinckia indica subsp. indica ATCC 9039 6201291 YP_001833006.1 CDS Bind_1893 NC_010581.1 2155985 2156842 D PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: scl:sce1557 hypothetical protein; NmrA family protein 2155985..2156842 Beijerinckia indica subsp. indica ATCC 9039 6200427 YP_001833007.1 CDS Bind_1894 NC_010581.1 2156921 2159764 R PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: ppr:PBPRB0014 hypothetical acyltransferase family protein; AMP-dependent synthetase and ligase complement(2156921..2159764) Beijerinckia indica subsp. indica ATCC 9039 6201358 YP_001833008.1 CDS Bind_1895 NC_010581.1 2160130 2160627 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2160130..2160627) Beijerinckia indica subsp. indica ATCC 9039 6201539 YP_001833009.1 CDS Bind_1896 NC_010581.1 2160741 2162090 D KEGG: afw:Anae109_0029 major facilitator superfamily MFS_1; major facilitator transporter 2160741..2162090 Beijerinckia indica subsp. indica ATCC 9039 6200109 YP_001833010.1 CDS Bind_1897 NC_010581.1 2162193 2162987 R PFAM: alpha/beta hydrolase fold; KEGG: lpf:lpl0291 hypothetical protein; alpha/beta hydrolase fold protein complement(2162193..2162987) Beijerinckia indica subsp. indica ATCC 9039 6200822 YP_001833011.1 CDS Bind_1898 NC_010581.1 2163535 2165718 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2163535..2165718 Beijerinckia indica subsp. indica ATCC 9039 6199576 YP_001833012.1 CDS Bind_1899 NC_010581.1 2166075 2167565 D PFAM: FAD linked oxidase domain protein; KEGG: swi:Swit_0991 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 2166075..2167565 Beijerinckia indica subsp. indica ATCC 9039 6200732 YP_001833013.1 CDS Bind_1900 NC_010581.1 2167670 2168983 D PFAM: FAD linked oxidase domain protein; KEGG: mes:Meso_0363 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2167670..2168983 Beijerinckia indica subsp. indica ATCC 9039 6200121 YP_001833014.1 CDS Bind_1901 NC_010581.1 2168988 2170325 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit; hypothetical protein 2168988..2170325 Beijerinckia indica subsp. indica ATCC 9039 6198959 YP_001833015.1 CDS Bind_1902 NC_010581.1 2170373 2171329 R PFAM: protein of unknown function DUF535; KEGG: esa:ESA_02461 hypothetical protein; hypothetical protein complement(2170373..2171329) Beijerinckia indica subsp. indica ATCC 9039 6198606 YP_001833016.1 CDS Bind_1903 NC_010581.1 2171681 2171890 R PFAM: TOBE domain protein; KEGG: rpa:RPA4719 molybdo-pterin binding protein; TOBE domain-containing protein complement(2171681..2171890) Beijerinckia indica subsp. indica ATCC 9039 6200537 YP_001833017.1 CDS ispH NC_010581.1 2172525 2173484 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2172525..2173484) Beijerinckia indica subsp. indica ATCC 9039 6199867 YP_001833018.1 CDS Bind_1905 NC_010581.1 2174039 2174341 D PFAM: ferredoxin; KEGG: pna:Pnap_1587 ferredoxin; ferredoxin 2174039..2174341 Beijerinckia indica subsp. indica ATCC 9039 6199664 YP_001833019.1 CDS Bind_1906 NC_010581.1 2174454 2175593 D KEGG: amr:AM1_B0141 hypothetical protein; hypothetical protein 2174454..2175593 Beijerinckia indica subsp. indica ATCC 9039 6199958 YP_001833020.1 CDS Bind_1907 NC_010581.1 2175982 2176428 D hypothetical protein 2175982..2176428 Beijerinckia indica subsp. indica ATCC 9039 6200247 YP_001833021.1 CDS Bind_1908 NC_010581.1 2176461 2176916 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pla:Plav_0645 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase complement(2176461..2176916) Beijerinckia indica subsp. indica ATCC 9039 6198796 YP_001833022.1 CDS Bind_1909 NC_010581.1 2176921 2178939 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3504 putative ABC multidrug transporter, fused ATPase and permease domains; ABC transporter-like protein complement(2176921..2178939) Beijerinckia indica subsp. indica ATCC 9039 6199676 YP_001833023.1 CDS Bind_1910 NC_010581.1 2179196 2180344 R PFAM: Peptidoglycan-binding LysM; KEGG: bbt:BBta_3954 hypothetical protein; peptidoglycan-binding LysM complement(2179196..2180344) Beijerinckia indica subsp. indica ATCC 9039 6200478 YP_001833024.1 CDS Bind_1911 NC_010581.1 2180466 2181095 D PFAM: conserved hypothetical protein; KEGG: rpa:RPA2004 hypothetical protein; hypothetical protein 2180466..2181095 Beijerinckia indica subsp. indica ATCC 9039 6198799 YP_001833025.1 CDS Bind_1912 NC_010581.1 2181098 2182834 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mac:MA3293 hypothetical protein; hypothetical protein 2181098..2182834 Beijerinckia indica subsp. indica ATCC 9039 6201313 YP_001833026.1 CDS Bind_1913 NC_010581.1 2182847 2184457 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bbt:BBta_3501 putative alpha-isopropylmalate/homocitrate synthase family transferase; putative alpha-isopropylmalate/homocitrate synthase family transferase complement(2182847..2184457) Beijerinckia indica subsp. indica ATCC 9039 6199957 YP_001833027.1 CDS Bind_1914 NC_010581.1 2184454 2184957 R PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2088 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2184454..2184957) Beijerinckia indica subsp. indica ATCC 9039 6200168 YP_001833028.1 CDS cysS NC_010581.1 2184954 2186330 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2184954..2186330) Beijerinckia indica subsp. indica ATCC 9039 6199137 YP_001833029.1 CDS Bind_1916 NC_010581.1 2186576 2186743 D KEGG: rpb:RPB_4438 SpoVT/AbrB-like; SpoVT/AbrB-like protein 2186576..2186743 Beijerinckia indica subsp. indica ATCC 9039 6200506 YP_001833030.1 CDS Bind_1917 NC_010581.1 2187150 2187662 R KEGG: tpe:Tpen_0017 nucleoside 2-deoxyribosyltransferase; hypothetical protein complement(2187150..2187662) Beijerinckia indica subsp. indica ATCC 9039 6200725 YP_001833031.1 CDS Bind_1918 NC_010581.1 2187674 2188684 R KEGG: tcx:Tcr_0335 hypothetical protein; hypothetical protein complement(2187674..2188684) Beijerinckia indica subsp. indica ATCC 9039 6201126 YP_001833032.1 CDS Bind_1919 NC_010581.1 2188650 2188913 R hypothetical protein complement(2188650..2188913) Beijerinckia indica subsp. indica ATCC 9039 6200166 YP_001833033.1 CDS Bind_1920 NC_010581.1 2189080 2190150 D PFAM: Choloylglycine hydrolase; KEGG: dac:Daci_3467 choloylglycine hydrolase; choloylglycine hydrolase 2189080..2190150 Beijerinckia indica subsp. indica ATCC 9039 6198819 YP_001833034.1 CDS Bind_1921 NC_010581.1 2190284 2191576 R PFAM: Fmu (Sun) domain protein; KEGG: azc:AZC_3702 putative RNA methyltransferase; Fmu (Sun) domain-containing protein complement(2190284..2191576) Beijerinckia indica subsp. indica ATCC 9039 6201191 YP_001833035.1 CDS Bind_1922 NC_010581.1 2191576 2192013 R PFAM: protein of unknown function DUF1123; KEGG: nha:Nham_2544 protein of unknown function DUF1123; hypothetical protein complement(2191576..2192013) Beijerinckia indica subsp. indica ATCC 9039 6200727 YP_001833036.1 CDS Bind_1923 NC_010581.1 2192020 2193510 R KEGG: rpb:RPB_3193 inositol-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(2192020..2193510) Beijerinckia indica subsp. indica ATCC 9039 6201849 YP_001833037.1 CDS Bind_1924 NC_010581.1 2193916 2195367 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3371 putative multidrug efflux protein; EmrB/QacA family drug resistance transporter 2193916..2195367 Beijerinckia indica subsp. indica ATCC 9039 6198784 YP_001833038.1 CDS Bind_1925 NC_010581.1 2195534 2195968 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A3827 putative universal stress protein; UspA domain-containing protein 2195534..2195968 Beijerinckia indica subsp. indica ATCC 9039 6198836 YP_001833039.1 CDS Bind_1926 NC_010581.1 2196006 2196710 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ complement(2196006..2196710) Beijerinckia indica subsp. indica ATCC 9039 6200961 YP_001833040.1 CDS Bind_1927 NC_010581.1 2196721 2197857 R PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(2196721..2197857) Beijerinckia indica subsp. indica ATCC 9039 6200742 YP_001833041.1 CDS Bind_1928 NC_010581.1 2198117 2198794 R KEGG: azc:AZC_3364 hypothetical protein; hypothetical protein complement(2198117..2198794) Beijerinckia indica subsp. indica ATCC 9039 6200020 YP_001833042.1 CDS Bind_1929 NC_010581.1 2199043 2200827 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2199043..2200827 Beijerinckia indica subsp. indica ATCC 9039 6198804 YP_001833043.1 CDS Bind_1930 NC_010581.1 2200981 2202525 D PFAM: peptidase S10 serine carboxypeptidase; KEGG: bbt:BBta_5174 putative peptidase S10, serine carboxypeptidase; peptidase S10 serine carboxypeptidase 2200981..2202525 Beijerinckia indica subsp. indica ATCC 9039 6200939 YP_001833044.1 CDS Bind_1931 NC_010581.1 2202596 2202763 R KEGG: mca:MCA0267 hypothetical protein; hypothetical protein complement(2202596..2202763) Beijerinckia indica subsp. indica ATCC 9039 6200361 YP_001833045.1 CDS Bind_1932 NC_010581.1 2203038 2203637 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 2203038..2203637 Beijerinckia indica subsp. indica ATCC 9039 6199577 YP_001833046.1 CDS Bind_1933 NC_010581.1 2203678 2204301 D PFAM: YceI family protein; KEGG: gdi:GDI1483 hypothetical protein; hypothetical protein 2203678..2204301 Beijerinckia indica subsp. indica ATCC 9039 6199401 YP_001833047.1 CDS Bind_1934 NC_010581.1 2204309 2204881 D PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561; cytochrome B561 2204309..2204881 Beijerinckia indica subsp. indica ATCC 9039 6199116 YP_001833048.1 CDS Bind_1935 NC_010581.1 2204908 2205483 D PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein; hypothetical protein 2204908..2205483 Beijerinckia indica subsp. indica ATCC 9039 6201229 YP_001833049.1 CDS Bind_1937 NC_010581.1 2206564 2207265 D PFAM: Pirin domain protein; KEGG: gdi:GDI0848 hypothetical protein; pirin domain-containing protein 2206564..2207265 Beijerinckia indica subsp. indica ATCC 9039 6200080 YP_001833050.1 CDS Bind_1938 NC_010581.1 2207378 2208115 D converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 2207378..2208115 Beijerinckia indica subsp. indica ATCC 9039 6199933 YP_001833051.1 CDS Bind_1939 NC_010581.1 2208178 2209455 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1147 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2208178..2209455) Beijerinckia indica subsp. indica ATCC 9039 6200087 YP_001833052.1 CDS Bind_1940 NC_010581.1 2209639 2210337 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mex:Mext_3838 peroxiredoxin; peroxiredoxin 2209639..2210337 Beijerinckia indica subsp. indica ATCC 9039 6200180 YP_001833053.1 CDS Bind_1941 NC_010581.1 2210347 2211261 D PFAM: beta-lactamase domain protein; KEGG: sme:SMc00276 hypothetical protein; beta-lactamase domain-containing protein 2210347..2211261 Beijerinckia indica subsp. indica ATCC 9039 6199236 YP_001833054.1 CDS Bind_1942 NC_010581.1 2211277 2211666 D PFAM: regulatory protein ArsR; KEGG: bov:BOV_A0396 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2211277..2211666 Beijerinckia indica subsp. indica ATCC 9039 6201338 YP_001833055.1 CDS Bind_1943 NC_010581.1 2211714 2212496 D PFAM: protein of unknown function DUF81; KEGG: oan:Oant_4660 protein of unknown function DUF81; hypothetical protein 2211714..2212496 Beijerinckia indica subsp. indica ATCC 9039 6201110 YP_001833056.1 CDS Bind_1944 NC_010581.1 2212630 2214888 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2212630..2214888) Beijerinckia indica subsp. indica ATCC 9039 6200831 YP_001833057.1 CDS Bind_1945 NC_010581.1 2215119 2217605 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpd:RPD_1639 tetratricopeptide TPR_2; hypothetical protein complement(2215119..2217605) Beijerinckia indica subsp. indica ATCC 9039 6200763 YP_001833058.1 CDS Bind_1946 NC_010581.1 2217698 2219338 R PFAM: sulfatase; KEGG: bja:bll5074 putative arylsulfatase; sulfatase complement(2217698..2219338) Beijerinckia indica subsp. indica ATCC 9039 6201199 YP_001833059.1 CDS Bind_1947 NC_010581.1 2220122 2220325 D hypothetical protein 2220122..2220325 Beijerinckia indica subsp. indica ATCC 9039 6200508 YP_001833060.1 CDS Bind_1948 NC_010581.1 2220503 2221693 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2220503..2221693) Beijerinckia indica subsp. indica ATCC 9039 6201281 YP_001833061.1 CDS Bind_1949 NC_010581.1 2221813 2222166 R KEGG: bbt:BBta_5892 hypothetical protein; hypothetical protein complement(2221813..2222166) Beijerinckia indica subsp. indica ATCC 9039 6200112 YP_001833062.1 CDS Bind_1950 NC_010581.1 2222370 2223065 D PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: xau:Xaut_3496 leucyltransferase; leucyltransferase 2222370..2223065 Beijerinckia indica subsp. indica ATCC 9039 6200476 YP_001833063.1 CDS Bind_1951 NC_010581.1 2223079 2223822 R KEGG: mex:Mext_1100 conserved hypothetical protein; hypothetical protein complement(2223079..2223822) Beijerinckia indica subsp. indica ATCC 9039 6198878 YP_001833064.1 CDS Bind_1952 NC_010581.1 2223885 2224286 R PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: nwi:Nwi_1760 NADH-ubiquinone oxidoreductase; NADH:ubiquinone oxidoreductase subunit complement(2223885..2224286) Beijerinckia indica subsp. indica ATCC 9039 6201856 YP_001833065.1 CDS Bind_1953 NC_010581.1 2224447 2224902 D PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein; LrgA family protein 2224447..2224902 Beijerinckia indica subsp. indica ATCC 9039 6198774 YP_001833066.1 CDS Bind_1954 NC_010581.1 2224895 2225614 D PFAM: LrgB family protein; KEGG: reu:Reut_A2795 LrgB-like protein; LrgB family protein 2224895..2225614 Beijerinckia indica subsp. indica ATCC 9039 6199062 YP_001833067.1 CDS Bind_1955 NC_010581.1 2225851 2229561 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2225851..2229561 Beijerinckia indica subsp. indica ATCC 9039 6198970 YP_001833068.1 CDS Bind_1956 NC_010581.1 2229728 2230513 R PFAM: peptidase S16 lon domain protein; KEGG: bbt:BBta_3560 putative ATP-dependent protease La; endopeptidase La complement(2229728..2230513) Beijerinckia indica subsp. indica ATCC 9039 6198998 YP_001833069.1 CDS Bind_1957 NC_010581.1 2230925 2231308 R hypothetical protein complement(2230925..2231308) Beijerinckia indica subsp. indica ATCC 9039 6198795 YP_001833070.1 CDS Bind_1958 NC_010581.1 2231802 2234252 D KEGG: scl:sce7776 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2231802..2234252 Beijerinckia indica subsp. indica ATCC 9039 6200191 YP_001833071.1 CDS Bind_1959 NC_010581.1 2234311 2234964 R PFAM: Glutathione S-transferase domain; KEGG: reu:Reut_A0763 glutathione S-transferase, N-terminal; glutathione S-transferase domain-containing protein complement(2234311..2234964) Beijerinckia indica subsp. indica ATCC 9039 6198941 YP_001833072.1 CDS Bind_1960 NC_010581.1 2235148 2236365 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mpt:Mpe_A1565 hypothetical protein; polyhydroxyalkanoate depolymerase 2235148..2236365 Beijerinckia indica subsp. indica ATCC 9039 6199147 YP_001833073.1 CDS Bind_1961 NC_010581.1 2236417 2238066 R PFAM: response regulator receiver; Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: hau:Haur_4511 Glu/Leu/Phe/Val dehydrogenase; response regulator receiver protein complement(2236417..2238066) Beijerinckia indica subsp. indica ATCC 9039 6200316 YP_001833074.1 CDS Bind_1962 NC_010581.1 2238196 2238891 R KEGG: rha:RHA1_ro00070 hypothetical protein; hypothetical protein complement(2238196..2238891) Beijerinckia indica subsp. indica ATCC 9039 6200292 YP_001833075.1 CDS Bind_1963 NC_010581.1 2239031 2239759 R PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase domain-containing protein complement(2239031..2239759) Beijerinckia indica subsp. indica ATCC 9039 6199013 YP_001833076.1 CDS Bind_1964 NC_010581.1 2239811 2240986 D PFAM: amidinotransferase; KEGG: nwi:Nwi_2321 amidinotransferase; non-specific serine/threonine protein kinase 2239811..2240986 Beijerinckia indica subsp. indica ATCC 9039 6200350 YP_001833077.1 CDS Bind_1965 NC_010581.1 2241002 2241316 R PFAM: small multidrug resistance protein; KEGG: nha:Nham_1679 small multidrug resistance protein; small multidrug resistance protein complement(2241002..2241316) Beijerinckia indica subsp. indica ATCC 9039 6199935 YP_001833078.1 CDS Bind_1966 NC_010581.1 2241394 2241903 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gdi:GDI0166 putative molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B complement(2241394..2241903) Beijerinckia indica subsp. indica ATCC 9039 6200342 YP_001833079.1 CDS Bind_1967 NC_010581.1 2242035 2243003 R KEGG: cyb:CYB_0037 nitrate ABC transporter, ATP-binding protein NtrC; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein complement(2242035..2243003) Beijerinckia indica subsp. indica ATCC 9039 6201289 YP_001833080.1 CDS Bind_1968 NC_010581.1 2243000 2243581 R PFAM: response regulator receiver; ANTAR domain protein; KEGG: pat:Patl_2529 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(2243000..2243581) Beijerinckia indica subsp. indica ATCC 9039 6200170 YP_001833081.1 CDS Bind_1969 NC_010581.1 2243590 2247531 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mfa:Mfla_0317 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(2243590..2247531) Beijerinckia indica subsp. indica ATCC 9039 6200756 YP_001833082.1 CDS Bind_1970 NC_010581.1 2247597 2250497 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppf:Pput_4015 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit complement(2247597..2250497) Beijerinckia indica subsp. indica ATCC 9039 6200926 YP_001833083.1 CDS Bind_1971 NC_010581.1 2250684 2251955 R PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA1213 nitrate transporter; major facilitator transporter complement(2250684..2251955) Beijerinckia indica subsp. indica ATCC 9039 6199352 YP_001833084.1 CDS Bind_1972 NC_010581.1 2252320 2253531 R PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gdi:GDI0493 putative flavohemoprotein; oxidoreductase FAD-binding subunit complement(2252320..2253531) Beijerinckia indica subsp. indica ATCC 9039 6200376 YP_001833085.1 CDS Bind_1973 NC_010581.1 2253609 2254061 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: gdi:GDI0494 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2253609..2254061 Beijerinckia indica subsp. indica ATCC 9039 6199773 YP_001833086.1 CDS Bind_1974 NC_010581.1 2254237 2259186 D KEGG: rpd:RPD_0591 DNA helicase, putative; DNA helicase 2254237..2259186 Beijerinckia indica subsp. indica ATCC 9039 6200791 YP_001833087.1 CDS Bind_1975 NC_010581.1 2259341 2259628 R hypothetical protein complement(2259341..2259628) Beijerinckia indica subsp. indica ATCC 9039 6200455 YP_001833088.1 CDS Bind_1976 NC_010581.1 2259908 2260693 R KEGG: rsh:Rsph17029_2609 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase complement(2259908..2260693) Beijerinckia indica subsp. indica ATCC 9039 6201088 YP_001833089.1 CDS Bind_1977 NC_010581.1 2260765 2261541 D PFAM: methyltransferase small; KEGG: xau:Xaut_1375 methyltransferase small; methyltransferase small 2260765..2261541 Beijerinckia indica subsp. indica ATCC 9039 6200835 YP_001833090.1 CDS Bind_1978 NC_010581.1 2261664 2261966 R KEGG: bra:BRADO0368 hypothetical protein; hypothetical protein complement(2261664..2261966) Beijerinckia indica subsp. indica ATCC 9039 6201093 YP_001833091.1 CDS glyQ NC_010581.1 2262248 2263207 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2262248..2263207 Beijerinckia indica subsp. indica ATCC 9039 6199250 YP_001833092.1 CDS Bind_1980 NC_010581.1 2263350 2263853 D KEGG: mex:Mext_4423 hypothetical protein; hypothetical protein 2263350..2263853 Beijerinckia indica subsp. indica ATCC 9039 6199187 YP_001833093.1 CDS Bind_1981 NC_010581.1 2263872 2264108 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bja:bsr5907 probable transcriptional regulator; AsnC family transcriptional regulator complement(2263872..2264108) Beijerinckia indica subsp. indica ATCC 9039 6200418 YP_001833094.1 CDS Bind_1982 NC_010581.1 2264305 2264781 R hypothetical protein complement(2264305..2264781) Beijerinckia indica subsp. indica ATCC 9039 6201194 YP_001833095.1 CDS Bind_1983 NC_010581.1 2264942 2267485 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_1524 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(2264942..2267485) Beijerinckia indica subsp. indica ATCC 9039 6198546 YP_001833096.1 CDS Bind_1984 NC_010581.1 2268131 2268457 D hypothetical protein 2268131..2268457 Beijerinckia indica subsp. indica ATCC 9039 6200377 YP_001833097.1 CDS Bind_1985 NC_010581.1 2268592 2269674 D KEGG: mex:Mext_2609 hypothetical protein; hypothetical protein 2268592..2269674 Beijerinckia indica subsp. indica ATCC 9039 6200297 YP_001833098.1 CDS Bind_1986 NC_010581.1 2269851 2271167 R KEGG: xau:Xaut_1697 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2269851..2271167) Beijerinckia indica subsp. indica ATCC 9039 6200457 YP_001833099.1 CDS Bind_1987 NC_010581.1 2271177 2272046 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: azc:AZC_1024 acetyl-CoA carboxylase carboxyl transferase beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(2271177..2272046) Beijerinckia indica subsp. indica ATCC 9039 6200743 YP_001833100.1 CDS trpA NC_010581.1 2272110 2272943 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2272110..2272943) Beijerinckia indica subsp. indica ATCC 9039 6198983 YP_001833101.1 CDS Bind_1989 NC_010581.1 2273184 2273387 R hypothetical protein complement(2273184..2273387) Beijerinckia indica subsp. indica ATCC 9039 6199061 YP_001833102.1 CDS Bind_1990 NC_010581.1 2274131 2275375 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2274131..2275375) Beijerinckia indica subsp. indica ATCC 9039 6200757 YP_001833103.1 CDS Bind_1991 NC_010581.1 2275663 2276790 R PFAM: regulatory protein LuxR; KEGG: rle:pRL100454 putative transcriptional regulator; LuxR family transcriptional regulator complement(2275663..2276790) Beijerinckia indica subsp. indica ATCC 9039 6201182 YP_001833104.1 CDS Bind_1992 NC_010581.1 2277277 2278410 R PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B1619 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2277277..2278410) Beijerinckia indica subsp. indica ATCC 9039 6199549 YP_001833105.1 CDS Bind_1993 NC_010581.1 2278659 2279783 R PFAM: regulatory protein LuxR; KEGG: rpb:RPB_2794 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2278659..2279783) Beijerinckia indica subsp. indica ATCC 9039 6199674 YP_001833106.1 CDS Bind_1994 NC_010581.1 2280317 2280748 D PFAM: OsmC family protein; KEGG: cak:Caul_5086 OsmC family protein; OsmC family protein 2280317..2280748 Beijerinckia indica subsp. indica ATCC 9039 6199175 YP_001833107.1 CDS Bind_1995 NC_010581.1 2280846 2282564 R KEGG: bra:BRADO5888 hypothetical protein; hypothetical protein complement(2280846..2282564) Beijerinckia indica subsp. indica ATCC 9039 6200145 YP_001833108.1 CDS Bind_1996 NC_010581.1 2283058 2283780 D PFAM: MgtC/SapB transporter; KEGG: bja:bll7766 hypothetical protein; MgtC/SapB transporter 2283058..2283780 Beijerinckia indica subsp. indica ATCC 9039 6199589 YP_001833109.1 CDS Bind_1997 NC_010581.1 2283859 2284218 D KEGG: gdi:GDI0596 hypothetical protein; hypothetical protein 2283859..2284218 Beijerinckia indica subsp. indica ATCC 9039 6199592 YP_001833110.1 CDS Bind_1998 NC_010581.1 2284615 2285718 D KEGG: xau:Xaut_0561 hypothetical protein; hypothetical protein 2284615..2285718 Beijerinckia indica subsp. indica ATCC 9039 6200029 YP_001833111.1 CDS Bind_1999 NC_010581.1 2285724 2286311 D KEGG: xau:Xaut_0560 GCN5-related N-acetyltransferase; hypothetical protein 2285724..2286311 Beijerinckia indica subsp. indica ATCC 9039 6200444 YP_001833112.1 CDS Bind_2000 NC_010581.1 2286252 2286809 R KEGG: xau:Xaut_0559 adenylate kinase-like protein; adenylate kinase-like protein complement(2286252..2286809) Beijerinckia indica subsp. indica ATCC 9039 6198641 YP_001833113.1 CDS Bind_2001 NC_010581.1 2286800 2287222 R KEGG: cak:Caul_1163 protein of unknown function DUF437; hypothetical protein complement(2286800..2287222) Beijerinckia indica subsp. indica ATCC 9039 6198703 YP_001833114.1 CDS Bind_2002 NC_010581.1 2287200 2288249 R KEGG: xau:Xaut_0558 hypothetical protein; hypothetical protein complement(2287200..2288249) Beijerinckia indica subsp. indica ATCC 9039 6200441 YP_001833115.1 CDS Bind_2003 NC_010581.1 2288666 2289436 R PFAM: carbonic anhydrase; KEGG: rpb:RPB_4620 carbonic anhydrase; carbonic anhydrase complement(2288666..2289436) Beijerinckia indica subsp. indica ATCC 9039 6201125 YP_001833116.1 CDS Bind_2004 NC_010581.1 2289707 2290771 D KEGG: gdi:GDI2313 putative ABC-type Fe3+ transport system periplasmic component; putative ABC-type Fe3+ transport system periplasmic component 2289707..2290771 Beijerinckia indica subsp. indica ATCC 9039 6198414 YP_001833117.1 CDS Bind_2005 NC_010581.1 2290768 2291817 D PFAM: transport system permease protein; KEGG: gdi:GDI2312 putative ABC-type Fe3+ transport system permease component; transport system permease 2290768..2291817 Beijerinckia indica subsp. indica ATCC 9039 6201043 YP_001833118.1 CDS Bind_2006 NC_010581.1 2291814 2292551 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2311 putative ABC-type Fe3+ transport system ATP-binding component; ABC transporter-like protein 2291814..2292551 Beijerinckia indica subsp. indica ATCC 9039 6199861 YP_001833119.1 CDS Bind_2007 NC_010581.1 2292555 2293826 R PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_0023 major facilitator superfamily MFS_1; major facilitator transporter complement(2292555..2293826) Beijerinckia indica subsp. indica ATCC 9039 6199295 YP_001833120.1 CDS Bind_2009 NC_010581.1 2295915 2297141 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_2308 major facilitator superfamily MFS_1; major facilitator transporter 2295915..2297141 Beijerinckia indica subsp. indica ATCC 9039 6199526 YP_001833121.1 CDS Bind_2010 NC_010581.1 2297148 2297375 R KEGG: rpb:RPB_1508 hypothetical protein; hypothetical protein complement(2297148..2297375) Beijerinckia indica subsp. indica ATCC 9039 6198708 YP_001833122.1 CDS Bind_2011 NC_010581.1 2297549 2298310 R KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase complement(2297549..2298310) Beijerinckia indica subsp. indica ATCC 9039 6200708 YP_001833123.1 CDS Bind_2012 NC_010581.1 2298735 2299100 D hypothetical protein 2298735..2299100 Beijerinckia indica subsp. indica ATCC 9039 6199768 YP_001833124.1 CDS Bind_2013 NC_010581.1 2299166 2299402 R hypothetical protein complement(2299166..2299402) Beijerinckia indica subsp. indica ATCC 9039 6200288 YP_001833125.1 CDS Bind_2014 NC_010581.1 2299528 2300190 R KEGG: eba:ebA3304 hypoxanthine-guanine phosphoribosyltransferase; hypothetical protein complement(2299528..2300190) Beijerinckia indica subsp. indica ATCC 9039 6199294 YP_001833126.1 CDS Bind_2015 NC_010581.1 2301040 2302440 D PFAM: polysaccharide biosynthesis protein; KEGG: ppr:PBPRA2684 hypothetical protein; polysaccharide biosynthesis protein 2301040..2302440 Beijerinckia indica subsp. indica ATCC 9039 6199070 YP_001833127.1 CDS Bind_2016 NC_010581.1 2302468 2303892 D PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_1246 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2302468..2303892 Beijerinckia indica subsp. indica ATCC 9039 6199960 YP_001833128.1 CDS Bind_2017 NC_010581.1 2303940 2305247 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2291 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(2303940..2305247) Beijerinckia indica subsp. indica ATCC 9039 6200596 YP_001833129.1 CDS Bind_2018 NC_010581.1 2305682 2306062 D PFAM: 4-oxalocrotonate tautomerase; KEGG: pol:Bpro_0509 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2305682..2306062 Beijerinckia indica subsp. indica ATCC 9039 6199404 YP_001833130.1 CDS Bind_2019 NC_010581.1 2306067 2307374 R KEGG: bxe:Bxe_C0750 Mn2+/Fe2+ transporter, NRAMP family; Mn2+/Fe2+ transporter complement(2306067..2307374) Beijerinckia indica subsp. indica ATCC 9039 6199931 YP_001833131.1 CDS Bind_2020 NC_010581.1 2307626 2309266 R KEGG: bte:BTH_II1873 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; levanase complement(2307626..2309266) Beijerinckia indica subsp. indica ATCC 9039 6201344 YP_001833132.1 CDS Bind_2021 NC_010581.1 2309632 2311236 D PFAM: glycoside hydrolase family 68; KEGG: bch:Bcen2424_4270 levansucrase; levansucrase 2309632..2311236 Beijerinckia indica subsp. indica ATCC 9039 6201278 YP_001833133.1 CDS Bind_2022 NC_010581.1 2311418 2312176 R PFAM: protein of unknown function DUF159; KEGG: rpd:RPD_1245 protein of unknown function DUF159; hypothetical protein complement(2311418..2312176) Beijerinckia indica subsp. indica ATCC 9039 6198807 YP_001833134.1 CDS Bind_2023 NC_010581.1 2312260 2313240 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 2312260..2313240 Beijerinckia indica subsp. indica ATCC 9039 6199329 YP_001833135.1 CDS Bind_2024 NC_010581.1 2313243 2314820 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3796 putative outer membrane protein; RND efflux system outer membrane lipoprotein complement(2313243..2314820) Beijerinckia indica subsp. indica ATCC 9039 6200474 YP_001833136.1 CDS Bind_2025 NC_010581.1 2314934 2316514 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_1723 multidrug resistance protein B; EmrB/QacA family drug resistance transporter complement(2314934..2316514) Beijerinckia indica subsp. indica ATCC 9039 6198793 YP_001833137.1 CDS Bind_2026 NC_010581.1 2316511 2317716 R PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1724 multidrug resistance protein A; secretion protein HlyD family protein complement(2316511..2317716) Beijerinckia indica subsp. indica ATCC 9039 6200205 YP_001833138.1 CDS Bind_2027 NC_010581.1 2317955 2318581 D PFAM: regulatory protein TetR; KEGG: mca:MCA2256 transcriptional regulator, TetR family; TetR family transcriptional regulator 2317955..2318581 Beijerinckia indica subsp. indica ATCC 9039 6201089 YP_001833139.1 CDS Bind_2028 NC_010581.1 2318622 2319494 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: xau:Xaut_2373 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 2318622..2319494 Beijerinckia indica subsp. indica ATCC 9039 6199942 YP_001833140.1 CDS Bind_2029 NC_010581.1 2319506 2320474 R KEGG: xau:Xaut_3321 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2319506..2320474) Beijerinckia indica subsp. indica ATCC 9039 6199598 YP_001833141.1 CDS Bind_2030 NC_010581.1 2320512 2320763 D hypothetical protein 2320512..2320763 Beijerinckia indica subsp. indica ATCC 9039 6200667 YP_001833142.1 CDS Bind_2031 NC_010581.1 2320991 2323540 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_2607 TonB-dependent siderophore receptor, putative; TonB-dependent receptor 2320991..2323540 Beijerinckia indica subsp. indica ATCC 9039 6199863 YP_001833143.1 CDS Bind_2032 NC_010581.1 2323589 2324626 D KEGG: bch:Bcen2424_4026 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 2323589..2324626 Beijerinckia indica subsp. indica ATCC 9039 6198778 YP_001833144.1 CDS Bind_2033 NC_010581.1 2324637 2327030 R KEGG: azc:AZC_3122 PAS protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(2324637..2327030) Beijerinckia indica subsp. indica ATCC 9039 6200408 YP_001833145.1 CDS Bind_2034 NC_010581.1 2328055 2328858 D PFAM: regulatory protein LysR; TOBE domain protein; KEGG: rpd:RPD_2476 ModE molybdate transport repressor domain; ModE family transcriptional regulator 2328055..2328858 Beijerinckia indica subsp. indica ATCC 9039 6200125 YP_001833146.1 CDS Bind_2035 NC_010581.1 2329056 2329217 D hypothetical protein 2329056..2329217 Beijerinckia indica subsp. indica ATCC 9039 6201119 YP_001833147.1 CDS rpsM NC_010581.1 2329205 2329573 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 2329205..2329573 Beijerinckia indica subsp. indica ATCC 9039 6200105 YP_001833148.1 CDS Bind_2037 NC_010581.1 2329766 2330155 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 2329766..2330155 Beijerinckia indica subsp. indica ATCC 9039 6199748 YP_001833149.1 CDS Bind_2038 NC_010581.1 2330121 2330345 D hypothetical protein 2330121..2330345 Beijerinckia indica subsp. indica ATCC 9039 6199839 YP_001833150.1 CDS Bind_2039 NC_010581.1 2330415 2331431 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2330415..2331431 Beijerinckia indica subsp. indica ATCC 9039 6200215 YP_001833151.1 CDS rplQ NC_010581.1 2331533 2331955 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 2331533..2331955 Beijerinckia indica subsp. indica ATCC 9039 6201040 YP_001833152.1 CDS Bind_2041 NC_010581.1 2332174 2333616 D KEGG: xau:Xaut_4771 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2332174..2333616 Beijerinckia indica subsp. indica ATCC 9039 6198883 YP_001833153.1 CDS Bind_2042 NC_010581.1 2333671 2334978 D PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mlo:mlr0329 recombination factor protein RarA; ATPase central domain-containing protein 2333671..2334978 Beijerinckia indica subsp. indica ATCC 9039 6199113 YP_001833154.1 CDS Bind_2043 NC_010581.1 2335126 2336022 D PFAM: alpha/beta hydrolase fold; KEGG: bmn:BMA10247_0277 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2335126..2336022 Beijerinckia indica subsp. indica ATCC 9039 6198893 YP_001833155.1 CDS Bind_2044 NC_010581.1 2336169 2337014 R PFAM: fatty acid hydroxylase; KEGG: afm:AFUA_6G00740 conserved hypothetical protein; fatty acid hydroxylase complement(2336169..2337014) Beijerinckia indica subsp. indica ATCC 9039 6199349 YP_001833156.1 CDS pyrE NC_010581.1 2337296 2337994 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2337296..2337994 Beijerinckia indica subsp. indica ATCC 9039 6200362 YP_001833157.1 CDS Bind_2046 NC_010581.1 2338022 2338681 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rpc:RPC_3189 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 2338022..2338681 Beijerinckia indica subsp. indica ATCC 9039 6199707 YP_001833158.1 CDS Bind_2047 NC_010581.1 2338737 2339012 D KEGG: gdi:GDI3488 hypothetical protein; hypothetical protein 2338737..2339012 Beijerinckia indica subsp. indica ATCC 9039 6201484 YP_001833159.1 CDS Bind_2048 NC_010581.1 2339212 2340873 R PFAM: glycosyl transferase family 2; KEGG: sak:SAK_1253 capsular polysaccharide biosynthesis protein CpsJ; glycosyl transferase family protein complement(2339212..2340873) Beijerinckia indica subsp. indica ATCC 9039 6200078 YP_001833160.1 CDS Bind_2049 NC_010581.1 2340861 2341187 R hypothetical protein complement(2340861..2341187) Beijerinckia indica subsp. indica ATCC 9039 6198601 YP_001833161.1 CDS Bind_2050 NC_010581.1 2341478 2342926 R KEGG: gbe:GbCGDNIH1_0645 pyridine nucleotide-disulfide oxidoreductase family; pyridine nucleotide-disulfide oxidoreductase family protein complement(2341478..2342926) Beijerinckia indica subsp. indica ATCC 9039 6200084 YP_001833162.1 CDS Bind_2051 NC_010581.1 2343046 2344224 R PFAM: Luciferase-like monooxygenase; KEGG: xau:Xaut_1213 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase complement(2343046..2344224) Beijerinckia indica subsp. indica ATCC 9039 6200973 YP_001833163.1 CDS Bind_2052 NC_010581.1 2344246 2345637 R KEGG: bbt:BBta_3195 putative luciferase-like protein, putative alkanesulfonate monooxygenase; putative luciferase-like protein alkanesulfonate monooxygenase complement(2344246..2345637) Beijerinckia indica subsp. indica ATCC 9039 6199233 YP_001833164.1 CDS Bind_2053 NC_010581.1 2345649 2346860 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2915 hypothetical protein; acyl-CoA dehydrogenase type 2 complement(2345649..2346860) Beijerinckia indica subsp. indica ATCC 9039 6198898 YP_001833165.1 CDS Bind_2054 NC_010581.1 2346915 2348162 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 complement(2346915..2348162) Beijerinckia indica subsp. indica ATCC 9039 6200776 YP_001833166.1 CDS Bind_2055 NC_010581.1 2348471 2348947 D PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 regulatory protein AsnC/Lrp family; AsnC family transcriptional regulator 2348471..2348947 Beijerinckia indica subsp. indica ATCC 9039 6198745 YP_001833167.1 CDS Bind_2056 NC_010581.1 2349272 2349514 D KEGG: azc:AZC_0167 hypothetical protein; hypothetical protein 2349272..2349514 Beijerinckia indica subsp. indica ATCC 9039 6200086 YP_001833168.1 CDS Bind_2057 NC_010581.1 2349572 2350414 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2775 ABC transporter related; ABC transporter-like protein complement(2349572..2350414) Beijerinckia indica subsp. indica ATCC 9039 6200070 YP_001833169.1 CDS Bind_2058 NC_010581.1 2350408 2351454 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2350408..2351454) Beijerinckia indica subsp. indica ATCC 9039 6201200 YP_001833170.1 CDS Bind_2060 NC_010581.1 2352818 2353114 D hypothetical protein 2352818..2353114 Beijerinckia indica subsp. indica ATCC 9039 6200059 YP_001833171.1 CDS Bind_2061 NC_010581.1 2353193 2355583 D KEGG: bbt:BBta_2963 putative membrane transporter; putative membrane transporter 2353193..2355583 Beijerinckia indica subsp. indica ATCC 9039 6199941 YP_001833172.1 CDS Bind_2062 NC_010581.1 2355638 2356153 R KEGG: rpa:RPA4573 hypothetical protein; hypothetical protein complement(2355638..2356153) Beijerinckia indica subsp. indica ATCC 9039 6200660 YP_001833173.1 CDS Bind_2063 NC_010581.1 2356460 2358811 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(2356460..2358811) Beijerinckia indica subsp. indica ATCC 9039 6201038 YP_001833174.1 CDS Bind_2064 NC_010581.1 2359162 2360298 D KEGG: xau:Xaut_0236 hypothetical protein; hypothetical protein 2359162..2360298 Beijerinckia indica subsp. indica ATCC 9039 6201158 YP_001833175.1 CDS Bind_2065 NC_010581.1 2360372 2360944 R PFAM: DinB family protein; KEGG: oan:Oant_2595 DinB family protein; DinB family protein complement(2360372..2360944) Beijerinckia indica subsp. indica ATCC 9039 6201295 YP_001833176.1 CDS Bind_2066 NC_010581.1 2361029 2361895 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_0951 transcriptional regulator, LysR family; LysR family transcriptional regulator 2361029..2361895 Beijerinckia indica subsp. indica ATCC 9039 6200785 YP_001833177.1 CDS Bind_2067 NC_010581.1 2361952 2364741 R KEGG: bja:bll4696 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A complement(2361952..2364741) Beijerinckia indica subsp. indica ATCC 9039 6201366 YP_001833178.1 CDS Bind_2068 NC_010581.1 2364862 2365938 D KEGG: cvi:CV_0172 poly (3-hydroxybutyrate) depolymerase; poly (3-hydroxybutyrate) depolymerase 2364862..2365938 Beijerinckia indica subsp. indica ATCC 9039 6198463 YP_001833179.1 CDS Bind_2069 NC_010581.1 2366006 2366548 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mes:Meso_1397 single-strand binding protein; single-strand binding protein complement(2366006..2366548) Beijerinckia indica subsp. indica ATCC 9039 6200415 YP_001833180.1 CDS Bind_2070 NC_010581.1 2366694 2368439 R PFAM: Heparinase II/III family protein; KEGG: xau:Xaut_0039 heparinase II/III family protein; heparinase II/III family protein complement(2366694..2368439) Beijerinckia indica subsp. indica ATCC 9039 6199772 YP_001833181.1 CDS Bind_2071 NC_010581.1 2368584 2369975 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: xau:Xaut_0038 sun protein; sun protein complement(2368584..2369975) Beijerinckia indica subsp. indica ATCC 9039 6198354 YP_001833182.1 CDS Bind_2072 NC_010581.1 2370147 2370374 D PFAM: protein of unknown function DUF1674; KEGG: xau:Xaut_1806 protein of unknown function DUF1674; hypothetical protein 2370147..2370374 Beijerinckia indica subsp. indica ATCC 9039 6200347 YP_001833183.1 CDS Bind_2073 NC_010581.1 2370572 2372821 D PFAM: TonB-dependent receptor plug; KEGG: sat:SYN_01058 TonB dependent receptor family; TonB-dependent receptor plug 2370572..2372821 Beijerinckia indica subsp. indica ATCC 9039 6199241 YP_001833184.1 CDS Bind_2074 NC_010581.1 2372882 2373904 D PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein 2372882..2373904 Beijerinckia indica subsp. indica ATCC 9039 6198501 YP_001833185.1 CDS Bind_2075 NC_010581.1 2374049 2374780 D KEGG: sat:SYN_00840 hypothetical cytosolic protein; hypothetical protein 2374049..2374780 Beijerinckia indica subsp. indica ATCC 9039 6201113 YP_001833186.1 CDS Bind_2076 NC_010581.1 2375021 2376433 D KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein; O-antigen and teichoic acid-like protein export membrane protein 2375021..2376433 Beijerinckia indica subsp. indica ATCC 9039 6200950 YP_001833187.1 CDS Bind_2077 NC_010581.1 2376497 2376907 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rle:RL1132 putative transmembrane protein; hypothetical protein 2376497..2376907 Beijerinckia indica subsp. indica ATCC 9039 6201106 YP_001833188.1 CDS Bind_2078 NC_010581.1 2376904 2377338 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sme:SMa1052 hypothetical protein; hypothetical protein 2376904..2377338 Beijerinckia indica subsp. indica ATCC 9039 6200451 YP_001833189.1 CDS Bind_2079 NC_010581.1 2377499 2378248 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: smd:Smed_4324 GntR domain protein; regulatory protein GntR HTH 2377499..2378248 Beijerinckia indica subsp. indica ATCC 9039 6200560 YP_001833190.1 CDS Bind_2080 NC_010581.1 2378356 2379342 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: acr:Acry_2399 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2378356..2379342 Beijerinckia indica subsp. indica ATCC 9039 6200546 YP_001833191.1 CDS Bind_2081 NC_010581.1 2379472 2380785 D PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4374 major facilitator family transporter; major facilitator transporter 2379472..2380785 Beijerinckia indica subsp. indica ATCC 9039 6199469 YP_001833192.1 CDS Bind_2082 NC_010581.1 2380854 2381516 R PFAM: class II aldolase/adducin family protein; KEGG: xau:Xaut_1030 class II aldolase/adducin family protein; putative aldolase complement(2380854..2381516) Beijerinckia indica subsp. indica ATCC 9039 6200881 YP_001833193.1 CDS Bind_2083 NC_010581.1 2381550 2382569 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xau:Xaut_1029 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(2381550..2382569) Beijerinckia indica subsp. indica ATCC 9039 6199857 YP_001833194.1 CDS Bind_2084 NC_010581.1 2382856 2384169 D PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1028 major facilitator superfamily MFS_1; major facilitator transporter 2382856..2384169 Beijerinckia indica subsp. indica ATCC 9039 6201297 YP_001833195.1 CDS Bind_2085 NC_010581.1 2384261 2385187 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bbt:BBta_2897 putative dehydrogenase, NAD(P)-binding domain; 3-hydroxyisobutyrate dehydrogenase 2384261..2385187 Beijerinckia indica subsp. indica ATCC 9039 6199841 YP_001833196.1 CDS Bind_2086 NC_010581.1 2385323 2386132 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_1026 hydroxypyruvate isomerase; hydroxypyruvate isomerase 2385323..2386132 Beijerinckia indica subsp. indica ATCC 9039 6201293 YP_001833197.1 CDS Bind_2087 NC_010581.1 2386129 2387406 D PFAM: type III effector Hrp-dependent outers; KEGG: bja:blr2930 hypothetical protein; Hrp-dependent type III effector protein 2386129..2387406 Beijerinckia indica subsp. indica ATCC 9039 6200509 YP_001833198.1 CDS Bind_2088 NC_010581.1 2387488 2388381 R PFAM: alpha/beta hydrolase fold; KEGG: gvi:gll1281 hypothetical protein; alpha/beta hydrolase fold protein complement(2387488..2388381) Beijerinckia indica subsp. indica ATCC 9039 6199493 YP_001833199.1 CDS Bind_2089 NC_010581.1 2388506 2389429 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4867 transcriptional regulator, LysR family; LysR family transcriptional regulator 2388506..2389429 Beijerinckia indica subsp. indica ATCC 9039 6198664 YP_001833200.1 CDS Bind_2090 NC_010581.1 2389575 2390288 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb20210 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2389575..2390288 Beijerinckia indica subsp. indica ATCC 9039 6200370 YP_001833201.1 CDS Bind_2091 NC_010581.1 2390353 2391441 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: ret:RHE_PF00539 probable dioxygenase protein; 2-nitropropane dioxygenase 2390353..2391441 Beijerinckia indica subsp. indica ATCC 9039 6200518 YP_001833202.1 CDS Bind_2092 NC_010581.1 2392257 2394269 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0454 TonB-dependent outer membrane receptor for cobalamin and Fe transport; TonB-dependent receptor 2392257..2394269 Beijerinckia indica subsp. indica ATCC 9039 6200226 YP_001833203.1 CDS Bind_2093 NC_010581.1 2394280 2394930 D KEGG: fre:Franean1_3545 hypothetical protein; hypothetical protein 2394280..2394930 Beijerinckia indica subsp. indica ATCC 9039 6199153 YP_001833204.1 CDS Bind_2094 NC_010581.1 2394965 2395507 D KEGG: ret:RHE_CH02620 hypothetical protein; hypothetical protein 2394965..2395507 Beijerinckia indica subsp. indica ATCC 9039 6200557 YP_001833205.1 CDS Bind_2095 NC_010581.1 2395706 2396134 R PFAM: protein of unknown function DUF336; KEGG: bbt:BBta_5732 hypothetical protein; hypothetical protein complement(2395706..2396134) Beijerinckia indica subsp. indica ATCC 9039 6199911 YP_001833206.1 CDS Bind_2096 NC_010581.1 2396374 2396895 D KEGG: gdi:GDI0683 hypothetical protein; hypothetical protein 2396374..2396895 Beijerinckia indica subsp. indica ATCC 9039 6200923 YP_001833207.1 CDS Bind_2097 NC_010581.1 2396921 2398042 R PFAM: UMUC domain protein DNA-repair protein; KEGG: sme:SMa2355 DNA polymerase IV; DNA-directed DNA polymerase complement(2396921..2398042) Beijerinckia indica subsp. indica ATCC 9039 6200902 YP_001833208.1 CDS Bind_2098 NC_010581.1 2398099 2399865 R PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: cak:Caul_2971 poly-beta-hydroxybutyrate polymerase domain protein; poly-beta-hydroxybutyrate polymerase domain-containing protein complement(2398099..2399865) Beijerinckia indica subsp. indica ATCC 9039 6199375 YP_001833209.1 CDS Bind_2099 NC_010581.1 2399849 2400964 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: xau:Xaut_0368 PHB de-polymerase domain protein; polyhydroxyalkanoate depolymerase complement(2399849..2400964) Beijerinckia indica subsp. indica ATCC 9039 6200336 YP_001833210.1 CDS Bind_2101 NC_010581.1 2402625 2403905 D KEGG: rpe:RPE_0575 hypothetical protein; siderophore synthetase component-like protein 2402625..2403905 Beijerinckia indica subsp. indica ATCC 9039 6200315 YP_001833211.1 CDS Bind_2102 NC_010581.1 2403933 2404817 D PFAM: protein of unknown function LppY and LpqO; KEGG: aba:Acid345_3442 protein of unknown function LppY and LpqO; hypothetical protein 2403933..2404817 Beijerinckia indica subsp. indica ATCC 9039 6199615 YP_001833212.1 CDS Bind_2103 NC_010581.1 2404881 2406293 R KEGG: rle:RL4555 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit complement(2404881..2406293) Beijerinckia indica subsp. indica ATCC 9039 6200272 YP_001833213.1 CDS Bind_2104 NC_010581.1 2406268 2406486 R hypothetical protein complement(2406268..2406486) Beijerinckia indica subsp. indica ATCC 9039 6200683 YP_001833214.1 CDS Bind_2105 NC_010581.1 2406664 2407071 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_5680 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 2406664..2407071 Beijerinckia indica subsp. indica ATCC 9039 6199529 YP_001833215.1 CDS Bind_2106 NC_010581.1 2407077 2407433 R KEGG: cak:Caul_3766 hypothetical protein; hypothetical protein complement(2407077..2407433) Beijerinckia indica subsp. indica ATCC 9039 6199655 YP_001833216.1 CDS rplS NC_010581.1 2407586 2408032 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2407586..2408032) Beijerinckia indica subsp. indica ATCC 9039 6201857 YP_001833217.1 CDS Bind_2108 NC_010581.1 2408315 2409649 D KEGG: mex:Mext_1623 glycosyl transferase group 1; group 1 glycosyl transferase 2408315..2409649 Beijerinckia indica subsp. indica ATCC 9039 6198497 YP_001833218.1 CDS Bind_2109 NC_010581.1 2409694 2410353 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: azc:AZC_4444 translation initiation factor 3; translation initiation factor IF-3 2409694..2410353 Beijerinckia indica subsp. indica ATCC 9039 6199970 YP_001833219.1 CDS Bind_2110 NC_010581.1 2410513 2410836 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mes:Meso_3582 thioredoxin; thioredoxin 2410513..2410836 Beijerinckia indica subsp. indica ATCC 9039 6200558 YP_001833220.1 CDS Bind_2111 NC_010581.1 2410920 2412191 R KEGG: psb:Psyr_3318 hypothetical protein; hypothetical protein complement(2410920..2412191) Beijerinckia indica subsp. indica ATCC 9039 6200594 YP_001833221.1 CDS Bind_2112 NC_010581.1 2412333 2413451 R PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1810 hypothetical protein; secretion protein HlyD family protein complement(2412333..2413451) Beijerinckia indica subsp. indica ATCC 9039 6198771 YP_001833222.1 CDS Bind_2113 NC_010581.1 2413453 2414175 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eli:ELI_11040 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2413453..2414175) Beijerinckia indica subsp. indica ATCC 9039 6201121 YP_001833223.1 CDS Bind_2114 NC_010581.1 2414181 2415323 R PFAM: protein of unknown function DUF214; KEGG: mca:MCA1808 ABC-transporter permease protein, putative; hypothetical protein complement(2414181..2415323) Beijerinckia indica subsp. indica ATCC 9039 6200893 YP_001833224.1 CDS Bind_2115 NC_010581.1 2415470 2416111 D PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR; TetR family transcriptional regulator 2415470..2416111 Beijerinckia indica subsp. indica ATCC 9039 6200995 YP_001833225.1 CDS Bind_2116 NC_010581.1 2416150 2417043 D PFAM: Pirin domain protein; KEGG: cak:Caul_0818 pirin domain protein; pirin domain-containing protein 2416150..2417043 Beijerinckia indica subsp. indica ATCC 9039 6201007 YP_001833226.1 CDS Bind_2117 NC_010581.1 2417200 2417655 R hypothetical protein complement(2417200..2417655) Beijerinckia indica subsp. indica ATCC 9039 6200812 YP_001833227.1 CDS Bind_2118 NC_010581.1 2417681 2418781 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pde:Pden_4239 methylated-DNA--protein-cysteine methyltransferase; AraC family transcriptional regulator complement(2417681..2418781) Beijerinckia indica subsp. indica ATCC 9039 6201042 YP_001833228.1 CDS Bind_2119 NC_010581.1 2419073 2420296 D PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A0872 putative transport transmembrane protein; major facilitator transporter 2419073..2420296 Beijerinckia indica subsp. indica ATCC 9039 6199875 YP_001833229.1 CDS Bind_2120 NC_010581.1 2420329 2420853 D PFAM: protein of unknown function DUF336; KEGG: gox:GOX0922 hypothetical protein; hypothetical protein 2420329..2420853 Beijerinckia indica subsp. indica ATCC 9039 6200456 YP_001833230.1 CDS Bind_2121 NC_010581.1 2420883 2422022 D KEGG: gdi:GDI0861 putative major royal jelly-like protein; putative major royal jelly-like protein 2420883..2422022 Beijerinckia indica subsp. indica ATCC 9039 6200762 YP_001833231.1 CDS Bind_2122 NC_010581.1 2422571 2422702 R hypothetical protein complement(2422571..2422702) Beijerinckia indica subsp. indica ATCC 9039 6198551 YP_001833232.1 CDS Bind_2123 NC_010581.1 2422810 2423331 R KEGG: xac:XAC2169 methyl-accepting chemotaxis protein; hypothetical protein complement(2422810..2423331) Beijerinckia indica subsp. indica ATCC 9039 6200319 YP_001833233.1 CDS Bind_2124 NC_010581.1 2423505 2424557 R PFAM: acyltransferase 3; KEGG: gur:Gura_0699 acyltransferase 3; acyltransferase 3 complement(2423505..2424557) Beijerinckia indica subsp. indica ATCC 9039 6200275 YP_001833234.1 CDS Bind_2125 NC_010581.1 2424726 2425538 R KEGG: gdi:GDI0612 putative 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase complement(2424726..2425538) Beijerinckia indica subsp. indica ATCC 9039 6199661 YP_001833235.1 CDS Bind_2126 NC_010581.1 2425664 2428129 R KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(2425664..2428129) Beijerinckia indica subsp. indica ATCC 9039 6200142 YP_001833236.1 CDS Bind_2127 NC_010581.1 2428270 2429604 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_2087 putative MFS dicarboxylate transporter; major facilitator transporter complement(2428270..2429604) Beijerinckia indica subsp. indica ATCC 9039 6200072 YP_001833237.1 CDS Bind_2128 NC_010581.1 2430016 2430465 D hypothetical protein 2430016..2430465 Beijerinckia indica subsp. indica ATCC 9039 6199355 YP_001833238.1 CDS Bind_2129 NC_010581.1 2430730 2431119 R KEGG: atc:AGR_L_1520 hypothetical protein; hypothetical protein complement(2430730..2431119) Beijerinckia indica subsp. indica ATCC 9039 6198871 YP_001833239.1 CDS Bind_2130 NC_010581.1 2431601 2432002 D hypothetical protein 2431601..2432002 Beijerinckia indica subsp. indica ATCC 9039 6201685 YP_001833240.1 CDS Bind_2131 NC_010581.1 2432299 2434545 R KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; hypothetical protein complement(2432299..2434545) Beijerinckia indica subsp. indica ATCC 9039 6199343 YP_001833241.1 CDS Bind_2132 NC_010581.1 2434693 2437071 R KEGG: dre:799000 hypothetical protein LOC799000; hypothetical protein complement(2434693..2437071) Beijerinckia indica subsp. indica ATCC 9039 6200021 YP_001833242.1 CDS Bind_2133 NC_010581.1 2437306 2437590 R KEGG: kra:Krad_4676 hypothetical protein; hypothetical protein complement(2437306..2437590) Beijerinckia indica subsp. indica ATCC 9039 6199814 YP_001833243.1 CDS Bind_2134 NC_010581.1 2438221 2438394 R hypothetical protein complement(2438221..2438394) Beijerinckia indica subsp. indica ATCC 9039 6200443 YP_001833244.1 CDS Bind_2135 NC_010581.1 2439108 2439563 R KEGG: sme:SMc01448 hypothetical protein; hypothetical protein complement(2439108..2439563) Beijerinckia indica subsp. indica ATCC 9039 6199852 YP_001833245.1 CDS Bind_2136 NC_010581.1 2439706 2440461 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: swi:Swit_2241 arsenate resistance ArsH; arsenical resistance protein ArsH complement(2439706..2440461) Beijerinckia indica subsp. indica ATCC 9039 6201245 YP_001833246.1 CDS Bind_2137 NC_010581.1 2440469 2441551 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_3198 arsenical-resistance protein; arsenical-resistance protein complement(2440469..2441551) Beijerinckia indica subsp. indica ATCC 9039 6199596 YP_001833247.1 CDS Bind_2138 NC_010581.1 2441615 2442007 R PFAM: arsenate reductase and related; KEGG: smd:Smed_5055 arsenate reductase; arsenate reductase-like protein complement(2441615..2442007) Beijerinckia indica subsp. indica ATCC 9039 6201030 YP_001833248.1 CDS Bind_2139 NC_010581.1 2442007 2442546 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_0618 protein tyrosine phosphatase; protein tyrosine phosphatase complement(2442007..2442546) Beijerinckia indica subsp. indica ATCC 9039 6199824 YP_001833249.1 CDS Bind_2140 NC_010581.1 2442543 2442896 R SMART: regulatory protein ArsR; KEGG: rpc:RPC_0619 putative transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2442543..2442896) Beijerinckia indica subsp. indica ATCC 9039 6201086 YP_001833250.1 CDS Bind_2141 NC_010581.1 2443078 2445597 D KEGG: rpc:RPC_2461 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 2443078..2445597 Beijerinckia indica subsp. indica ATCC 9039 6200241 YP_001833251.1 CDS Bind_2142 NC_010581.1 2445605 2446300 R PFAM: protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_5570 putative membrane protein of unknown function; hypothetical protein complement(2445605..2446300) Beijerinckia indica subsp. indica ATCC 9039 6199384 YP_001833252.1 CDS Bind_2143 NC_010581.1 2446549 2447319 R PFAM: phosphoesterase PA-phosphatase related; KEGG: mlo:mll2704 probable acid phosphatase; PA-phosphatase-like protein complement(2446549..2447319) Beijerinckia indica subsp. indica ATCC 9039 6199777 YP_001833253.1 CDS Bind_2144 NC_010581.1 2447456 2448346 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpa:RPA0156 TonB like protein; TonB family protein complement(2447456..2448346) Beijerinckia indica subsp. indica ATCC 9039 6198884 YP_001833254.1 CDS Bind_2145 NC_010581.1 2448343 2448846 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gbe:GbCGDNIH1_1104 TolR protein; biopolymer transport protein ExbD/TolR complement(2448343..2448846) Beijerinckia indica subsp. indica ATCC 9039 6201848 YP_001833255.1 CDS Bind_2146 NC_010581.1 2448846 2449481 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA0154 possible MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(2448846..2449481) Beijerinckia indica subsp. indica ATCC 9039 6201307 YP_001833256.1 CDS Bind_2147 NC_010581.1 2449641 2451923 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: zmo:ZMO1807 TonB-dependent receptor; TonB-dependent receptor complement(2449641..2451923) Beijerinckia indica subsp. indica ATCC 9039 6201140 YP_001833257.1 CDS Bind_2148 NC_010581.1 2452171 2453202 R PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_1552 protein of unknown function DUF81; hypothetical protein complement(2452171..2453202) Beijerinckia indica subsp. indica ATCC 9039 6199632 YP_001833258.1 CDS Bind_2149 NC_010581.1 2453703 2454869 R PFAM: acyltransferase 3; KEGG: bxe:Bxe_B0486 hypothetical protein; acyltransferase 3 complement(2453703..2454869) Beijerinckia indica subsp. indica ATCC 9039 6200551 YP_001833259.1 CDS Bind_2150 NC_010581.1 2455223 2455744 D hypothetical protein 2455223..2455744 Beijerinckia indica subsp. indica ATCC 9039 6201292 YP_001833260.1 CDS Bind_2151 NC_010581.1 2455824 2457083 D PFAM: outer membrane efflux protein; KEGG: gdi:GDI1515 putative type I secretion outer membrane protein, TolC; outer membrane efflux protein 2455824..2457083 Beijerinckia indica subsp. indica ATCC 9039 6199271 YP_001833261.1 CDS Bind_2152 NC_010581.1 2457083 2458294 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1514 putative resistence protein; RND family efflux transporter MFP subunit 2457083..2458294 Beijerinckia indica subsp. indica ATCC 9039 6199788 YP_001833262.1 CDS Bind_2153 NC_010581.1 2458296 2461355 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI1513 putative heavy-metal ion transporter; CzcA family heavy metal efflux protein 2458296..2461355 Beijerinckia indica subsp. indica ATCC 9039 6200764 YP_001833263.1 CDS Bind_2154 NC_010581.1 2461352 2462008 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1512 putative two component response regulator; two component transcriptional regulator 2461352..2462008 Beijerinckia indica subsp. indica ATCC 9039 6200325 YP_001833264.1 CDS Bind_2155 NC_010581.1 2462014 2463363 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1511 putative sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2462014..2463363 Beijerinckia indica subsp. indica ATCC 9039 6199341 YP_001833265.1 CDS Bind_2156 NC_010581.1 2463534 2464970 D PFAM: Carbohydrate-selective porin OprB; KEGG: zmo:ZMO0064 carbohydrate-selective porin; carbohydrate-selective porin OprB 2463534..2464970 Beijerinckia indica subsp. indica ATCC 9039 6199670 YP_001833266.1 CDS pheS NC_010581.1 2465024 2466106 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2465024..2466106) Beijerinckia indica subsp. indica ATCC 9039 6200899 YP_001833267.1 CDS Bind_2158 NC_010581.1 2466200 2466523 R PFAM: CutA1 divalent ion tolerance protein; KEGG: shn:Shewana3_3575 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(2466200..2466523) Beijerinckia indica subsp. indica ATCC 9039 6201334 YP_001833268.1 CDS Bind_2159 NC_010581.1 2466520 2468358 R PFAM: creatinase; peptidase M24; KEGG: rpd:RPD_3379 peptidase M24; peptidase M24 complement(2466520..2468358) Beijerinckia indica subsp. indica ATCC 9039 6199473 YP_001833269.1 CDS Bind_2160 NC_010581.1 2468535 2468681 D hypothetical protein 2468535..2468681 Beijerinckia indica subsp. indica ATCC 9039 6199111 YP_001833270.1 CDS Bind_2161 NC_010581.1 2468961 2469515 D hypothetical protein 2468961..2469515 Beijerinckia indica subsp. indica ATCC 9039 6198457 YP_001833271.1 CDS Bind_2162 NC_010581.1 2469521 2470591 D PFAM: Radical SAM domain protein; KEGG: sus:Acid_4134 radical SAM domain protein; radical SAM domain-containing protein 2469521..2470591 Beijerinckia indica subsp. indica ATCC 9039 6199550 YP_001833272.1 CDS Bind_2163 NC_010581.1 2470619 2471224 R KEGG: smd:Smed_4170 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(2470619..2471224) Beijerinckia indica subsp. indica ATCC 9039 6198589 YP_001833273.1 CDS Bind_2164 NC_010581.1 2471224 2472027 R PFAM: thiazole biosynthesis family protein; KEGG: oan:Oant_0282 thiazole biosynthesis family protein; thiazole biosynthesis family protein complement(2471224..2472027) Beijerinckia indica subsp. indica ATCC 9039 6201123 YP_001833274.1 CDS Bind_2165 NC_010581.1 2472057 2472254 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rde:RD1_0748 thiamine biosynthesis protein ThiS, putative; thiamine biosynthesis protein ThiS complement(2472057..2472254) Beijerinckia indica subsp. indica ATCC 9039 6199633 YP_001833275.1 CDS Bind_2166 NC_010581.1 2472223 2473236 R TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll5793 thiamine biosynthesis oxidoreductase ThiO; glycine oxidase ThiO complement(2472223..2473236) Beijerinckia indica subsp. indica ATCC 9039 6198706 YP_001833276.1 CDS Bind_2167 NC_010581.1 2473812 2474411 D PFAM: Glutathione S-transferase domain; KEGG: mag:amb0787 glutathione S-transferase; glutathione S-transferase domain-containing protein 2473812..2474411 Beijerinckia indica subsp. indica ATCC 9039 6199797 YP_001833277.1 CDS Bind_2168 NC_010581.1 2474856 2475776 D KEGG: spc:Sputcn32_3843 hypothetical protein; hypothetical protein 2474856..2475776 Beijerinckia indica subsp. indica ATCC 9039 6199802 YP_001833278.1 CDS Bind_2169 NC_010581.1 2475766 2476251 D hypothetical protein 2475766..2476251 Beijerinckia indica subsp. indica ATCC 9039 6200079 YP_001833279.1 CDS Bind_2170 NC_010581.1 2476248 2478278 D KEGG: spc:Sputcn32_3840 hypothetical protein; hypothetical protein 2476248..2478278 Beijerinckia indica subsp. indica ATCC 9039 6200869 YP_001833280.1 CDS Bind_2171 NC_010581.1 2478503 2478931 D KEGG: mlo:mll5084 hypothetical protein; hypothetical protein 2478503..2478931 Beijerinckia indica subsp. indica ATCC 9039 6200705 YP_001833281.1 CDS Bind_2172 NC_010581.1 2478996 2479759 D KEGG: bcs:BCAN_A0546 hypothetical protein; transposase join(2478996..2479322,2479322..2479759) Beijerinckia indica subsp. indica ATCC 9039 6201342 YP_001833282.1 CDS Bind_2173 NC_010581.1 2479769 2480581 R PFAM: protein of unknown function DUF344; KEGG: mgm:Mmc1_0146 protein of unknown function DUF344; hypothetical protein complement(2479769..2480581) Beijerinckia indica subsp. indica ATCC 9039 6198575 YP_001833283.1 CDS Bind_2174 NC_010581.1 2480952 2484182 D TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB; double-strand break repair protein AddB 2480952..2484182 Beijerinckia indica subsp. indica ATCC 9039 6201795 YP_001833284.1 CDS Bind_2175 NC_010581.1 2484182 2487676 D TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: pla:Plav_0138 double-strand break repair helicase AddA; double-strand break repair helicase AddA 2484182..2487676 Beijerinckia indica subsp. indica ATCC 9039 6200774 YP_001833285.1 CDS Bind_2176 NC_010581.1 2487768 2488088 D TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin; thioredoxin 2487768..2488088 Beijerinckia indica subsp. indica ATCC 9039 6198735 YP_001833286.1 CDS Bind_2177 NC_010581.1 2488160 2488795 D PFAM: Radical SAM domain protein; KEGG: bpe:BP2659 hypothetical protein; radical SAM domain-containing protein 2488160..2488795 Beijerinckia indica subsp. indica ATCC 9039 6199700 YP_001833287.1 CDS Bind_2178 NC_010581.1 2488792 2489145 D TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mlo:mll8751 hypothetical protein; queuosine biosynthesis protein QueD 2488792..2489145 Beijerinckia indica subsp. indica ATCC 9039 6200536 YP_001833288.1 CDS Bind_2179 NC_010581.1 2489256 2489888 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B2672 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2489256..2489888) Beijerinckia indica subsp. indica ATCC 9039 6199832 YP_001833289.1 CDS Bind_2180 NC_010581.1 2489998 2490570 D PFAM: isochorismatase hydrolase; KEGG: zmo:ZMO1887 isochorismatase; isochorismatase hydrolase 2489998..2490570 Beijerinckia indica subsp. indica ATCC 9039 6199302 YP_001833290.1 CDS Bind_2181 NC_010581.1 2490583 2491671 D TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: zmo:ZMO1886 putative transport protein; membrane protein 2490583..2491671 Beijerinckia indica subsp. indica ATCC 9039 6201811 YP_001833291.1 CDS Bind_2182 NC_010581.1 2491969 2494383 R KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(2491969..2494383) Beijerinckia indica subsp. indica ATCC 9039 6201096 YP_001833292.1 CDS Bind_2183 NC_010581.1 2494641 2495906 R KEGG: mex:Mext_2417 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA ATPase central domain protein; zinc finger C4 domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX complement(2494641..2495906) Beijerinckia indica subsp. indica ATCC 9039 6201112 YP_001833293.1 CDS Bind_2184 NC_010581.1 2496448 2497101 R PFAM: peptidase S14 ClpP; KEGG: bcs:BCAN_A1128 ATP-dependent Clp protease proteolytic subunit; endopeptidase Clp complement(2496448..2497101) Beijerinckia indica subsp. indica ATCC 9039 6201770 YP_001833294.1 CDS tig NC_010581.1 2497905 2499287 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(2497905..2499287) Beijerinckia indica subsp. indica ATCC 9039 6199270 YP_001833295.1 CDS Bind_2186 NC_010581.1 2499715 2501241 D PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3; multicopper oxidase type 3 2499715..2501241 Beijerinckia indica subsp. indica ATCC 9039 6199371 YP_001833296.1 CDS Bind_2187 NC_010581.1 2501285 2501902 D PFAM: Putative ParB-like nuclease; KEGG: bbt:BBta_3524 hypothetical protein; putative ParB-like nuclease 2501285..2501902 Beijerinckia indica subsp. indica ATCC 9039 6200500 YP_001833297.1 CDS Bind_2188 NC_010581.1 2502018 2503067 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_3546 hypothetical protein; hypothetical protein 2502018..2503067 Beijerinckia indica subsp. indica ATCC 9039 6200577 YP_001833298.1 CDS Bind_2189 NC_010581.1 2503103 2503855 R PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_0988 hypothetical protein; GDSL family lipase complement(2503103..2503855) Beijerinckia indica subsp. indica ATCC 9039 6201127 YP_001833299.1 CDS Bind_2190 NC_010581.1 2503855 2504997 R KEGG: mex:Mext_0989 OpgC protein; OpgC protein complement(2503855..2504997) Beijerinckia indica subsp. indica ATCC 9039 6200149 YP_001833300.1 CDS Bind_2191 NC_010581.1 2505138 2506706 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rpc:RPC_2388 protein of unknown function UPF0031; carbohydrate kinase complement(2505138..2506706) Beijerinckia indica subsp. indica ATCC 9039 6201108 YP_001833301.1 CDS Bind_2192 NC_010581.1 2507098 2507427 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: rpa:RPA2669 hypothetical protein; hemimethylated DNA binding protein 2507098..2507427 Beijerinckia indica subsp. indica ATCC 9039 6199681 YP_001833302.1 CDS Bind_2193 NC_010581.1 2507522 2508277 R PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein; invasion associated locus B family protein complement(2507522..2508277) Beijerinckia indica subsp. indica ATCC 9039 6200099 YP_001833303.1 CDS Bind_2194 NC_010581.1 2508662 2510482 D PFAM: extracellular solute-binding protein family 5; KEGG: bov:BOV_A0542 peptide ABC transporter, periplasmic peptide-binding protein; extracellular solute-binding protein 2508662..2510482 Beijerinckia indica subsp. indica ATCC 9039 6199066 YP_001833304.1 CDS Bind_2195 NC_010581.1 2510625 2511272 D PFAM: DSBA oxidoreductase; KEGG: mlo:mlr0515 similar to FrnE protein; DSBA oxidoreductase 2510625..2511272 Beijerinckia indica subsp. indica ATCC 9039 6200343 YP_001833305.1 CDS Bind_2197 NC_010581.1 2511776 2512903 D PFAM: alpha/beta hydrolase fold; PHB de-polymerase domain protein; KEGG: bvi:Bcep1808_5356 PHB de-polymerase domain protein; PHB de-polymerase domain-containing protein 2511776..2512903 Beijerinckia indica subsp. indica ATCC 9039 6200446 YP_001833306.1 CDS Bind_2198 NC_010581.1 2513133 2513543 R KEGG: rle:RL1717 putative lactoylglutathione lyase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase complement(2513133..2513543) Beijerinckia indica subsp. indica ATCC 9039 6199709 YP_001833307.1 CDS Bind_2199 NC_010581.1 2513570 2515753 R KEGG: mex:Mext_4794 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit complement(2513570..2515753) Beijerinckia indica subsp. indica ATCC 9039 6200199 YP_001833308.1 CDS Bind_2200 NC_010581.1 2515753 2517627 R PFAM: methylmalonyl-CoA mutase; KEGG: bbt:BBta_3023 methylmalonyl-CoA mutase small subunit (MCM-beta); methylmalonyl-CoA mutase complement(2515753..2517627) Beijerinckia indica subsp. indica ATCC 9039 6200214 YP_001833309.1 CDS Bind_2201 NC_010581.1 2517976 2519850 D PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pde:Pden_5103 poly-beta-hydroxybutyrate polymerase domain protein; poly-beta-hydroxybutyrate polymerase domain-containing protein 2517976..2519850 Beijerinckia indica subsp. indica ATCC 9039 6201372 YP_001833310.1 CDS Bind_2202 NC_010581.1 2519908 2521311 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: azc:AZC_2420 phosphate acetyl/butyryltransferase family protein; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2519908..2521311 Beijerinckia indica subsp. indica ATCC 9039 6201103 YP_001833311.1 CDS Bind_2203 NC_010581.1 2521372 2523921 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_4377 magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 2521372..2523921 Beijerinckia indica subsp. indica ATCC 9039 6199114 YP_001833312.1 CDS Bind_2204 NC_010581.1 2524033 2526420 D PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: noc:Noc_2717 putative phosphoketolase; putative phosphoketolase 2524033..2526420 Beijerinckia indica subsp. indica ATCC 9039 6199758 YP_001833313.1 CDS Bind_2205 NC_010581.1 2526477 2528777 R PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bcs:BCAN_B0923 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein complement(2526477..2528777) Beijerinckia indica subsp. indica ATCC 9039 6200113 YP_001833314.1 CDS Bind_2206 NC_010581.1 2529247 2531775 D PFAM: sulfatase; KEGG: xau:Xaut_2420 sulfatase; sulfatase 2529247..2531775 Beijerinckia indica subsp. indica ATCC 9039 6199474 YP_001833315.1 CDS Bind_2207 NC_010581.1 2531824 2532045 D hypothetical protein 2531824..2532045 Beijerinckia indica subsp. indica ATCC 9039 6201352 YP_001833316.1 CDS Bind_2208 NC_010581.1 2532131 2532802 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI0682 putative transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2532131..2532802) Beijerinckia indica subsp. indica ATCC 9039 6201279 YP_001833317.1 CDS Bind_2209 NC_010581.1 2532914 2534248 R PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase; hydroxypyruvate reductase complement(2532914..2534248) Beijerinckia indica subsp. indica ATCC 9039 6198660 YP_001833318.1 CDS Bind_2210 NC_010581.1 2534245 2535612 R PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0681 putative glucarate transporter; major facilitator transporter complement(2534245..2535612) Beijerinckia indica subsp. indica ATCC 9039 6200703 YP_001833319.1 CDS Bind_2211 NC_010581.1 2535838 2537118 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gdi:GDI0680 putative acyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2535838..2537118 Beijerinckia indica subsp. indica ATCC 9039 6198419 YP_001833320.1 CDS Bind_2212 NC_010581.1 2537115 2537903 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI0679 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 2537115..2537903 Beijerinckia indica subsp. indica ATCC 9039 6199337 YP_001833321.1 CDS Bind_2213 NC_010581.1 2537910 2538281 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bch:Bcen2424_4927 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2537910..2538281) Beijerinckia indica subsp. indica ATCC 9039 6201302 YP_001833322.1 CDS Bind_2214 NC_010581.1 2538425 2538898 D PFAM: regulatory protein MarR; KEGG: rru:Rru_A1441 transcriptional regulator, MarR family; MarR family transcriptional regulator 2538425..2538898 Beijerinckia indica subsp. indica ATCC 9039 6200122 YP_001833323.1 CDS Bind_2216 NC_010581.1 2539745 2541388 D KEGG: nar:Saro_3404 hypothetical protein; hypothetical protein 2539745..2541388 Beijerinckia indica subsp. indica ATCC 9039 6199244 YP_001833324.1 CDS Bind_2217 NC_010581.1 2541706 2542779 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_L_281 hypothetical protein; alcohol dehydrogenase complement(2541706..2542779) Beijerinckia indica subsp. indica ATCC 9039 6198707 YP_001833325.1 CDS Bind_2218 NC_010581.1 2542961 2544916 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: smd:Smed_4035 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator complement(2542961..2544916) Beijerinckia indica subsp. indica ATCC 9039 6199154 YP_001833326.1 CDS Bind_2219 NC_010581.1 2545122 2545901 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: cko:CKO_01537 hypothetical protein; HAD family hydrolase complement(2545122..2545901) Beijerinckia indica subsp. indica ATCC 9039 6199109 YP_001833327.1 CDS Bind_2220 NC_010581.1 2546110 2546943 R PFAM: UspA domain protein; KEGG: nha:Nham_1935 UspA; UspA domain-containing protein complement(2546110..2546943) Beijerinckia indica subsp. indica ATCC 9039 6200845 YP_001833328.1 CDS Bind_2221 NC_010581.1 2547114 2548676 D KEGG: mlo:mll6593 hypothetical protein; hypothetical protein 2547114..2548676 Beijerinckia indica subsp. indica ATCC 9039 6199536 YP_001833329.1 CDS Bind_2222 NC_010581.1 2548777 2549508 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_3686 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 2548777..2549508 Beijerinckia indica subsp. indica ATCC 9039 6199391 YP_001833330.1 CDS rpsB NC_010581.1 2549684 2550769 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2549684..2550769 Beijerinckia indica subsp. indica ATCC 9039 6199845 YP_001833331.1 CDS tsf NC_010581.1 2550862 2551794 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2550862..2551794 Beijerinckia indica subsp. indica ATCC 9039 6198512 YP_001833332.1 CDS Bind_2225 NC_010581.1 2551951 2552592 D TIGRFAM: DNA ligase D, 3'-phosphoesterase domain protein; KEGG: bra:BRADO5823 ATP-dependent DNA ligase; DNA ligase 2551951..2552592 Beijerinckia indica subsp. indica ATCC 9039 6200285 YP_001833333.1 CDS Bind_2226 NC_010581.1 2552635 2553534 D TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: xau:Xaut_4365 DNA ligase D; DNA polymerase LigD polymerase subunit 2552635..2553534 Beijerinckia indica subsp. indica ATCC 9039 6199407 YP_001833334.1 CDS Bind_2227 NC_010581.1 2553740 2554090 D KEGG: mex:Mext_1412 hypothetical protein; hypothetical protein 2553740..2554090 Beijerinckia indica subsp. indica ATCC 9039 6199115 YP_001833335.1 CDS Bind_2228 NC_010581.1 2554272 2554979 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA1915 two-component transcriptional regulator FeuP, winged helix family; two component transcriptional regulator 2554272..2554979 Beijerinckia indica subsp. indica ATCC 9039 6198437 YP_001833336.1 CDS Bind_2229 NC_010581.1 2554976 2556367 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1409 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2554976..2556367 Beijerinckia indica subsp. indica ATCC 9039 6201006 YP_001833337.1 CDS Bind_2230 NC_010581.1 2556422 2557576 D KEGG: azc:AZC_1132 cytochrome c-type biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; cytochrome c-type biogenesis protein CcmI 2556422..2557576 Beijerinckia indica subsp. indica ATCC 9039 6200397 YP_001833338.1 CDS Bind_2231 NC_010581.1 2557850 2558332 D PFAM: CcmE/CycJ protein; KEGG: azc:AZC_1133 cytochrome c-type biogenesis protein; CcmE/CycJ protein 2557850..2558332 Beijerinckia indica subsp. indica ATCC 9039 6199346 YP_001833339.1 CDS Bind_2232 NC_010581.1 2558554 2560536 D TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpd:RPD_2003 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 2558554..2560536 Beijerinckia indica subsp. indica ATCC 9039 6199843 YP_001833340.1 CDS Bind_2233 NC_010581.1 2560540 2561070 D PFAM: cytochrome C biogenesis protein; KEGG: rpb:RPB_3447 cytochrome c biogenesis protein; cytochrome C biogenesis protein 2560540..2561070 Beijerinckia indica subsp. indica ATCC 9039 6200091 YP_001833341.1 CDS Bind_2234 NC_010581.1 2561065 2562396 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rle:RL3183 putative transmembrane protein; hypothetical protein complement(2561065..2562396) Beijerinckia indica subsp. indica ATCC 9039 6198155 YP_001833342.1 CDS Bind_2235 NC_010581.1 2562957 2564546 D KEGG: rpe:RPE_1939 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2562957..2564546 Beijerinckia indica subsp. indica ATCC 9039 6201155 YP_001833343.1 CDS Bind_2236 NC_010581.1 2564713 2565396 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver; two component transcriptional regulator 2564713..2565396 Beijerinckia indica subsp. indica ATCC 9039 6199766 YP_001833344.1 CDS Bind_2237 NC_010581.1 2565380 2566813 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2565380..2566813 Beijerinckia indica subsp. indica ATCC 9039 6198443 YP_001833345.1 CDS Bind_2238 NC_010581.1 2566824 2569796 D PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 2566824..2569796 Beijerinckia indica subsp. indica ATCC 9039 6198398 YP_001833346.1 CDS Bind_2240 NC_010581.1 2570967 2572661 R KEGG: mxa:MXAN_5387 hypothetical protein; hypothetical protein complement(2570967..2572661) Beijerinckia indica subsp. indica ATCC 9039 6201132 YP_001833347.1 CDS Bind_2241 NC_010581.1 2572911 2574242 R PFAM: sodium:dicarboxylate symporter; KEGG: bra:BRADO2301 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter complement(2572911..2574242) Beijerinckia indica subsp. indica ATCC 9039 6200417 YP_001833348.1 CDS Bind_2242 NC_010581.1 2574464 2577541 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: xau:Xaut_4315 excinuclease ABC, A subunit; excinuclease ABC subunit A 2574464..2577541 Beijerinckia indica subsp. indica ATCC 9039 6199658 YP_001833349.1 CDS Bind_2243 NC_010581.1 2578239 2579654 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 2578239..2579654 Beijerinckia indica subsp. indica ATCC 9039 6200470 YP_001833350.1 CDS Bind_2244 NC_010581.1 2579709 2579951 R hypothetical protein complement(2579709..2579951) Beijerinckia indica subsp. indica ATCC 9039 6201045 YP_001833351.1 CDS Bind_2245 NC_010581.1 2580470 2581291 D KEGG: azc:AZC_1792 hypothetical protein; hypothetical protein 2580470..2581291 Beijerinckia indica subsp. indica ATCC 9039 6200765 YP_001833352.1 CDS Bind_2246 NC_010581.1 2581434 2581607 R PFAM: protein of unknown function DUF1328; KEGG: atc:AGR_L_805 hypothetical protein; hypothetical protein complement(2581434..2581607) Beijerinckia indica subsp. indica ATCC 9039 6198765 YP_001833353.1 CDS Bind_2247 NC_010581.1 2581762 2582730 R TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase complement(2581762..2582730) Beijerinckia indica subsp. indica ATCC 9039 6198525 YP_001833354.1 CDS Bind_2248 NC_010581.1 2582730 2583179 R KEGG: xau:Xaut_1487 hypothetical protein; hypothetical protein complement(2582730..2583179) Beijerinckia indica subsp. indica ATCC 9039 6200089 YP_001833355.1 CDS Bind_2249 NC_010581.1 2583308 2584060 D PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 protein of unknown function DUF558; hypothetical protein 2583308..2584060 Beijerinckia indica subsp. indica ATCC 9039 6198891 YP_001833356.1 CDS Bind_2250 NC_010581.1 2584285 2584626 D KEGG: rpe:RPE_2414 hypothetical protein; hypothetical protein 2584285..2584626 Beijerinckia indica subsp. indica ATCC 9039 6198803 YP_001833357.1 CDS Bind_2251 NC_010581.1 2584700 2586082 R KEGG: xau:Xaut_4204 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate--cysteine ligase complement(2584700..2586082) Beijerinckia indica subsp. indica ATCC 9039 6200498 YP_001833358.1 CDS Bind_2252 NC_010581.1 2586382 2587212 R KEGG: mlo:mll6900 hypothetical protein; hypothetical protein complement(2586382..2587212) Beijerinckia indica subsp. indica ATCC 9039 6200821 YP_001833359.1 CDS Bind_2253 NC_010581.1 2587454 2588758 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: azc:AZC_2963 multi antimicrobial extrusion protein; MATE efflux family protein complement(2587454..2588758) Beijerinckia indica subsp. indica ATCC 9039 6200042 YP_001833360.1 CDS Bind_2254 NC_010581.1 2589053 2589400 R hypothetical protein complement(2589053..2589400) Beijerinckia indica subsp. indica ATCC 9039 6201019 YP_001833361.1 CDS Bind_2255 NC_010581.1 2589940 2590581 R PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4503 SNARE associated Golgi protein; hypothetical protein complement(2589940..2590581) Beijerinckia indica subsp. indica ATCC 9039 6199406 YP_001833362.1 CDS Bind_2256 NC_010581.1 2591326 2592000 R PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4503 SNARE associated Golgi protein; hypothetical protein complement(2591326..2592000) Beijerinckia indica subsp. indica ATCC 9039 6200789 YP_001833363.1 CDS Bind_2257 NC_010581.1 2592129 2593187 R KEGG: bcs:BCAN_A0113 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase complement(2592129..2593187) Beijerinckia indica subsp. indica ATCC 9039 6200843 YP_001833364.1 CDS Bind_2258 NC_010581.1 2593306 2594226 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A3402 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter permease complement(2593306..2594226) Beijerinckia indica subsp. indica ATCC 9039 6199682 YP_001833365.1 CDS Bind_2259 NC_010581.1 2594219 2595049 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00258 probable sulfate uptake ABC transporter, permease protein; sulfate ABC transporter permease complement(2594219..2595049) Beijerinckia indica subsp. indica ATCC 9039 6198864 YP_001833366.1 CDS Bind_2260 NC_010581.1 2595232 2595528 D KEGG: bmt:BSUIS_A0181 hypothetical protein; hypothetical protein 2595232..2595528 Beijerinckia indica subsp. indica ATCC 9039 6199403 YP_001833367.1 CDS Bind_2261 NC_010581.1 2595760 2597421 D PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: oan:Oant_0190 sulfite reductase (ferredoxin); sulfite reductase (ferredoxin) 2595760..2597421 Beijerinckia indica subsp. indica ATCC 9039 6199972 YP_001833368.1 CDS Bind_2262 NC_010581.1 2597408 2598148 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: sil:SPO2635 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 2597408..2598148 Beijerinckia indica subsp. indica ATCC 9039 6200547 YP_001833369.1 CDS Bind_2263 NC_010581.1 2598150 2598656 D PFAM: conserved hypothetical protein; KEGG: ccr:CC_1120 hypothetical protein; hypothetical protein 2598150..2598656 Beijerinckia indica subsp. indica ATCC 9039 6200430 YP_001833370.1 CDS Bind_2264 NC_010581.1 2598775 2599656 D PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: xau:Xaut_1265 protein of unknown function zinc metallopeptidase putative; hypothetical protein 2598775..2599656 Beijerinckia indica subsp. indica ATCC 9039 6198417 YP_001833371.1 CDS Bind_2265 NC_010581.1 2599733 2600251 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: pfo:Pfl_3712 cupin region; cupin complement(2599733..2600251) Beijerinckia indica subsp. indica ATCC 9039 6200320 YP_001833372.1 CDS Bind_2266 NC_010581.1 2600519 2601856 D KEGG: ana:all2748 hypothetical protein; hypothetical protein 2600519..2601856 Beijerinckia indica subsp. indica ATCC 9039 6200276 YP_001833373.1 CDS Bind_2267 NC_010581.1 2602014 2603366 R PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein complement(2602014..2603366) Beijerinckia indica subsp. indica ATCC 9039 6198757 YP_001833374.1 CDS Bind_2268 NC_010581.1 2603564 2604136 D PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3561 putative acetyltransferase; N-acetyltransferase GCN5 2603564..2604136 Beijerinckia indica subsp. indica ATCC 9039 6200495 YP_001833375.1 CDS Bind_2269 NC_010581.1 2604333 2605025 D KEGG: pla:Plav_1991 hypothetical protein; hypothetical protein 2604333..2605025 Beijerinckia indica subsp. indica ATCC 9039 6200118 YP_001833376.1 CDS Bind_2270 NC_010581.1 2605894 2606463 D PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 2605894..2606463 Beijerinckia indica subsp. indica ATCC 9039 6199340 YP_001833377.1 CDS Bind_2272 NC_010581.1 2607144 2607728 D KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 2607144..2607728 Beijerinckia indica subsp. indica ATCC 9039 6201159 YP_001833378.1 CDS Bind_2273 NC_010581.1 2607972 2608268 R hypothetical protein complement(2607972..2608268) Beijerinckia indica subsp. indica ATCC 9039 6199541 YP_001833379.1 CDS Bind_2274 NC_010581.1 2608298 2608507 R hypothetical protein complement(2608298..2608507) Beijerinckia indica subsp. indica ATCC 9039 6201190 YP_001833380.1 CDS Bind_2275 NC_010581.1 2608971 2609858 R KEGG: rci:LRC395 hypothetical protein; hypothetical protein complement(2608971..2609858) Beijerinckia indica subsp. indica ATCC 9039 6199395 YP_001833381.1 CDS Bind_2276 NC_010581.1 2609975 2611327 D PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein 2609975..2611327 Beijerinckia indica subsp. indica ATCC 9039 6199530 YP_001833382.1 CDS Bind_2277 NC_010581.1 2611550 2612239 R KEGG: mex:Mext_1008 hypothetical protein; hypothetical protein complement(2611550..2612239) Beijerinckia indica subsp. indica ATCC 9039 6200777 YP_001833383.1 CDS Bind_2278 NC_010581.1 2612244 2612744 R PFAM: GCN5-related N-acetyltransferase; KEGG: cak:Caul_0180 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2612244..2612744) Beijerinckia indica subsp. indica ATCC 9039 6201725 YP_001833384.1 CDS Bind_2279 NC_010581.1 2612812 2613363 R KEGG: bja:bll2513 hypothetical protein; hypothetical protein complement(2612812..2613363) Beijerinckia indica subsp. indica ATCC 9039 6201130 YP_001833385.1 CDS Bind_2280 NC_010581.1 2613363 2613827 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(2613363..2613827) Beijerinckia indica subsp. indica ATCC 9039 6199335 YP_001833386.1 CDS Bind_2281 NC_010581.1 2614166 2614777 D PFAM: HupE/UreJ protein; KEGG: xau:Xaut_2188 HupE/UreJ protein; HupE/UreJ protein 2614166..2614777 Beijerinckia indica subsp. indica ATCC 9039 6199697 YP_001833387.1 CDS Bind_2282 NC_010581.1 2614858 2615961 R KEGG: mex:Mext_3635 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(2614858..2615961) Beijerinckia indica subsp. indica ATCC 9039 6198661 YP_001833388.1 CDS Bind_2283 NC_010581.1 2615958 2616650 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit complement(2615958..2616650) Beijerinckia indica subsp. indica ATCC 9039 6199961 YP_001833389.1 CDS Bind_2284 NC_010581.1 2616939 2617751 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_4642 molybdate-binding periplasmic protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2616939..2617751) Beijerinckia indica subsp. indica ATCC 9039 6200786 YP_001833390.1 CDS Bind_2285 NC_010581.1 2618078 2618518 D PFAM: type IV pilus assembly PilZ; KEGG: bmf:BAB2_1083 hypothetical protein; type IV pilus assembly PilZ 2618078..2618518 Beijerinckia indica subsp. indica ATCC 9039 6201046 YP_001833391.1 CDS Bind_2287 NC_010581.1 2618927 2619433 R PFAM: protein of unknown function DUF892; KEGG: xau:Xaut_3218 protein of unknown function DUF892; hypothetical protein complement(2618927..2619433) Beijerinckia indica subsp. indica ATCC 9039 6200475 YP_001833392.1 CDS Bind_2288 NC_010581.1 2620254 2620454 D PFAM: CsbD family protein; KEGG: rpa:RPA4217 hypothetical protein; CsbD family protein 2620254..2620454 Beijerinckia indica subsp. indica ATCC 9039 6200147 YP_001833393.1 CDS Bind_2289 NC_010581.1 2620500 2620661 D hypothetical protein 2620500..2620661 Beijerinckia indica subsp. indica ATCC 9039 6200483 YP_001833394.1 CDS Bind_2290 NC_010581.1 2620834 2622123 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: mag:amb1842 beta-glucosidase-related glycosidase; glycoside hydrolase family 3 complement(2620834..2622123) Beijerinckia indica subsp. indica ATCC 9039 6198762 YP_001833395.1 CDS Bind_2293 NC_010581.1 2624183 2624377 D hypothetical protein 2624183..2624377 Beijerinckia indica subsp. indica ATCC 9039 6200076 YP_001833396.1 CDS Bind_2294 NC_010581.1 2624517 2625269 D PFAM: porin; KEGG: oan:Oant_0133 porin; porin 2624517..2625269 Beijerinckia indica subsp. indica ATCC 9039 6199080 YP_001833397.1 CDS Bind_2295 NC_010581.1 2625444 2626793 D KEGG: azc:AZC_1254 putative 2-methylthioadenine synthetase; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 2625444..2626793 Beijerinckia indica subsp. indica ATCC 9039 6199161 YP_001833398.1 CDS Bind_2296 NC_010581.1 2626865 2628664 R PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase; aminodeoxychorismate lyase complement(2626865..2628664) Beijerinckia indica subsp. indica ATCC 9039 6199771 YP_001833399.1 CDS Bind_2297 NC_010581.1 2629037 2630299 R TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: xau:Xaut_3133 beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(2629037..2630299) Beijerinckia indica subsp. indica ATCC 9039 6200979 YP_001833400.1 CDS Bind_2298 NC_010581.1 2630858 2631178 R TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: mes:Meso_1767 acyl carrier protein; acyl carrier protein complement(2630858..2631178) Beijerinckia indica subsp. indica ATCC 9039 6199273 YP_001833401.1 CDS Bind_2299 NC_010581.1 2631373 2632110 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rpc:RPC_2300 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(2631373..2632110) Beijerinckia indica subsp. indica ATCC 9039 6199988 YP_001833402.1 CDS Bind_2300 NC_010581.1 2632185 2633159 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rpd:RPD_2983 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2632185..2633159) Beijerinckia indica subsp. indica ATCC 9039 6198476 YP_001833403.1 CDS Bind_2301 NC_010581.1 2633331 2633747 D KEGG: bbt:BBta_7578 hypothetical protein; hypothetical protein 2633331..2633747 Beijerinckia indica subsp. indica ATCC 9039 6200440 YP_001833404.1 CDS Bind_2302 NC_010581.1 2633769 2635115 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3069 putative transporter transmembrane protein; major facilitator transporter complement(2633769..2635115) Beijerinckia indica subsp. indica ATCC 9039 6200501 YP_001833405.1 CDS rpsF NC_010581.1 2635501 2635956 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2635501..2635956 Beijerinckia indica subsp. indica ATCC 9039 6200894 YP_001833406.1 CDS rpsR NC_010581.1 2635956 2636198 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2635956..2636198 Beijerinckia indica subsp. indica ATCC 9039 6201580 YP_001833407.1 CDS Bind_2305 NC_010581.1 2636414 2637523 D KEGG: rpd:RPD_2987 hypothetical protein; hypothetical protein 2636414..2637523 Beijerinckia indica subsp. indica ATCC 9039 6199965 YP_001833408.1 CDS rplI NC_010581.1 2637585 2638154 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2637585..2638154 Beijerinckia indica subsp. indica ATCC 9039 6200094 YP_001833409.1 CDS Bind_2307 NC_010581.1 2638371 2639864 D KEGG: mex:Mext_3938 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 2638371..2639864 Beijerinckia indica subsp. indica ATCC 9039 6201008 YP_001833410.1 CDS Bind_2308 NC_010581.1 2639861 2641000 D KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2639861..2641000 Beijerinckia indica subsp. indica ATCC 9039 6199842 YP_001833411.1 CDS Bind_2309 NC_010581.1 2641013 2642428 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2641013..2642428 Beijerinckia indica subsp. indica ATCC 9039 6200505 YP_001833412.1 CDS Bind_2310 NC_010581.1 2642618 2643193 D PFAM: Colicin V production protein; KEGG: rpd:RPD_2996 colicin V production protein; colicin V production protein 2642618..2643193 Beijerinckia indica subsp. indica ATCC 9039 6199967 YP_001833413.1 CDS Bind_2311 NC_010581.1 2643984 2645489 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2643984..2645489 Beijerinckia indica subsp. indica ATCC 9039 6201726 YP_001833414.1 CDS Bind_2312 NC_010581.1 2645554 2646339 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2645554..2646339 Beijerinckia indica subsp. indica ATCC 9039 6199396 YP_001833415.1 CDS Bind_2313 NC_010581.1 2646877 2648130 D PFAM: AAA-4 family protein; KEGG: scl:sce6624 hypothetical protein; putative transcriptional regulator 2646877..2648130 Beijerinckia indica subsp. indica ATCC 9039 6198511 YP_001833416.1 CDS Bind_2314 NC_010581.1 2648608 2651322 D KEGG: fal:FRAAL3987 putative ATP/GTP-binding protein; hypothetical protein 2648608..2651322 Beijerinckia indica subsp. indica ATCC 9039 6199973 YP_001833417.1 CDS Bind_2315 NC_010581.1 2651700 2652221 R KEGG: atc:AGR_L_450 hypothetical protein; hypothetical protein complement(2651700..2652221) Beijerinckia indica subsp. indica ATCC 9039 6199877 YP_001833418.1 CDS Bind_2316 NC_010581.1 2652259 2652486 R hypothetical protein complement(2652259..2652486) Beijerinckia indica subsp. indica ATCC 9039 6201360 YP_001833419.1 CDS engA NC_010581.1 2652601 2654013 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2652601..2654013) Beijerinckia indica subsp. indica ATCC 9039 6200544 YP_001833420.1 CDS Bind_2318 NC_010581.1 2654013 2654777 R KEGG: rpe:RPE_3347 hypothetical protein; hypothetical protein complement(2654013..2654777) Beijerinckia indica subsp. indica ATCC 9039 6200228 YP_001833421.1 CDS Bind_2319 NC_010581.1 2655459 2655926 D PFAM: regulatory protein MarR; KEGG: bja:blr3851 transcriptional regulatory protein; MarR family transcriptional regulator 2655459..2655926 Beijerinckia indica subsp. indica ATCC 9039 6200093 YP_001833422.1 CDS Bind_2320 NC_010581.1 2655996 2658137 D PFAM: Fusaric acid resistance protein conserved region; KEGG: azc:AZC_1076 hypothetical protein; fusaric acid resistance protein region 2655996..2658137 Beijerinckia indica subsp. indica ATCC 9039 6199491 YP_001833423.1 CDS Bind_2321 NC_010581.1 2658134 2658343 D PFAM: protein of unknown function DUF1656; KEGG: rme:Rmet_4792 protein of unknown function DUF1656; hypothetical protein 2658134..2658343 Beijerinckia indica subsp. indica ATCC 9039 6198517 YP_001833424.1 CDS Bind_2322 NC_010581.1 2658349 2659296 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bov:BOV_A0706 HlyD family secretion protein; RND family efflux transporter MFP subunit 2658349..2659296 Beijerinckia indica subsp. indica ATCC 9039 6199691 YP_001833425.1 CDS Bind_2323 NC_010581.1 2659668 2659985 R hypothetical protein complement(2659668..2659985) Beijerinckia indica subsp. indica ATCC 9039 6200174 YP_001833426.1 CDS Bind_2324 NC_010581.1 2660435 2660836 D KEGG: bra:BRADO1841 hypothetical protein; hypothetical protein 2660435..2660836 Beijerinckia indica subsp. indica ATCC 9039 6201242 YP_001833427.1 CDS Bind_2325 NC_010581.1 2661030 2661734 R TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: nha:Nham_1234 aquaporin Z; MIP family channel protein complement(2661030..2661734) Beijerinckia indica subsp. indica ATCC 9039 6199304 YP_001833428.1 CDS Bind_2326 NC_010581.1 2661910 2662950 R PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein complement(2661910..2662950) Beijerinckia indica subsp. indica ATCC 9039 6198910 YP_001833429.1 CDS Bind_2327 NC_010581.1 2662954 2665326 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gvi:glr0349 ferrichrome-iron receptor; TonB-dependent siderophore receptor complement(2662954..2665326) Beijerinckia indica subsp. indica ATCC 9039 6200169 YP_001833430.1 CDS Bind_2328 NC_010581.1 2665681 2666499 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_0955 ABC transporter related; ABC transporter-like protein complement(2665681..2666499) Beijerinckia indica subsp. indica ATCC 9039 6198733 YP_001833431.1 CDS Bind_2329 NC_010581.1 2666496 2667542 R PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein; transport system permease complement(2666496..2667542) Beijerinckia indica subsp. indica ATCC 9039 6200927 YP_001833432.1 CDS Bind_2330 NC_010581.1 2667520 2668638 R PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein complement(2667520..2668638) Beijerinckia indica subsp. indica ATCC 9039 6200434 YP_001833433.1 CDS Bind_2331 NC_010581.1 2668844 2669281 D KEGG: mca:MCA1565 protozoan/cyanobacterial globin family protein; hypothetical protein 2668844..2669281 Beijerinckia indica subsp. indica ATCC 9039 6201090 YP_001833434.1 CDS Bind_2332 NC_010581.1 2669529 2669822 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bmu:Bmul_1768 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2669529..2669822) Beijerinckia indica subsp. indica ATCC 9039 6199296 YP_001833435.1 CDS Bind_2333 NC_010581.1 2670145 2670606 R PFAM: ribonuclease H; KEGG: azc:AZC_1466 ribonuclease H; ribonuclease H complement(2670145..2670606) Beijerinckia indica subsp. indica ATCC 9039 6200733 YP_001833436.1 CDS Bind_2334 NC_010581.1 2670603 2671568 R KEGG: xau:Xaut_2356 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase complement(2670603..2671568) Beijerinckia indica subsp. indica ATCC 9039 6198647 YP_001833437.1 CDS Bind_2335 NC_010581.1 2672362 2673522 R KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(2672362..2673522) Beijerinckia indica subsp. indica ATCC 9039 6199672 YP_001833438.1 CDS queA NC_010581.1 2673519 2674622 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(2673519..2674622) Beijerinckia indica subsp. indica ATCC 9039 6201054 YP_001833439.1 CDS Bind_2337 NC_010581.1 2674677 2675132 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bra:BRADO3995 peptidyl prolyl cis-trans isomerase (rotamase B); cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2674677..2675132) Beijerinckia indica subsp. indica ATCC 9039 6200439 YP_001833440.1 CDS Bind_2338 NC_010581.1 2675226 2676017 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03365 probable short-chain alcohol dehydrogenase protein; short-chain dehydrogenase/reductase SDR complement(2675226..2676017) Beijerinckia indica subsp. indica ATCC 9039 6201471 YP_001833441.1 CDS Bind_2339 NC_010581.1 2676109 2677020 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr4907 transcriptional regulator (AraC/XylS family); AraC family transcriptional regulator complement(2676109..2677020) Beijerinckia indica subsp. indica ATCC 9039 6200482 YP_001833442.1 CDS Bind_2340 NC_010581.1 2677179 2678099 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0209 ribose ABC transporter, periplasmic ribose-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2677179..2678099) Beijerinckia indica subsp. indica ATCC 9039 6199458 YP_001833443.1 CDS Bind_2341 NC_010581.1 2678198 2679244 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr4915 xylitol (sorbitol) dehydrogenase; alcohol dehydrogenase complement(2678198..2679244) Beijerinckia indica subsp. indica ATCC 9039 6200120 YP_001833444.1 CDS Bind_2342 NC_010581.1 2679553 2680038 R PFAM: protein of unknown function DUF336; KEGG: cak:Caul_1764 protein of unknown function DUF336; hypothetical protein complement(2679553..2680038) Beijerinckia indica subsp. indica ATCC 9039 6200039 YP_001833445.1 CDS Bind_2343 NC_010581.1 2680213 2680800 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2680213..2680800) Beijerinckia indica subsp. indica ATCC 9039 6200425 YP_001833446.1 CDS coaD NC_010581.1 2680826 2681329 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2680826..2681329) Beijerinckia indica subsp. indica ATCC 9039 6199264 YP_001833447.1 CDS Bind_2345 NC_010581.1 2681378 2682412 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_5550 putative thioredoxin reductase, FAD/NAD(P)-binding; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2681378..2682412) Beijerinckia indica subsp. indica ATCC 9039 6199143 YP_001833448.1 CDS Bind_2346 NC_010581.1 2682493 2682813 R PFAM: ferredoxin; KEGG: rpa:RPA3956 ferredoxin; ferredoxin complement(2682493..2682813) Beijerinckia indica subsp. indica ATCC 9039 6199251 YP_001833449.1 CDS Bind_2347 NC_010581.1 2683171 2683575 R PFAM: Hpt domain protein; KEGG: sme:SMc00191 hypothetical protein; Hpt domain-containing protein complement(2683171..2683575) Beijerinckia indica subsp. indica ATCC 9039 6199583 YP_001833450.1 CDS Bind_2348 NC_010581.1 2684559 2690609 D KEGG: rpa:RPA3958 hypothetical protein; hypothetical protein 2684559..2690609 Beijerinckia indica subsp. indica ATCC 9039 6200187 YP_001833451.1 CDS Bind_2349 NC_010581.1 2691335 2691649 D KEGG: acr:Acry_0749 hypothetical protein; hypothetical protein 2691335..2691649 Beijerinckia indica subsp. indica ATCC 9039 6198573 YP_001833452.1 CDS Bind_2350 NC_010581.1 2691766 2692680 D PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2691766..2692680 Beijerinckia indica subsp. indica ATCC 9039 6200331 YP_001833453.1 CDS Bind_2352 NC_010581.1 2693473 2693931 D KEGG: bbt:BBta_2161 hypothetical protein; hypothetical protein 2693473..2693931 Beijerinckia indica subsp. indica ATCC 9039 6200069 YP_001833454.1 CDS Bind_2353 NC_010581.1 2694003 2694182 D hypothetical protein 2694003..2694182 Beijerinckia indica subsp. indica ATCC 9039 6199708 YP_001833455.1 CDS Bind_2354 NC_010581.1 2694598 2695068 R hypothetical protein complement(2694598..2695068) Beijerinckia indica subsp. indica ATCC 9039 6199201 YP_001833456.1 CDS Bind_2355 NC_010581.1 2695403 2696008 D PFAM: regulatory protein TetR; KEGG: acr:Acry_3101 transcriptional regulator, TetR family; TetR family transcriptional regulator 2695403..2696008 Beijerinckia indica subsp. indica ATCC 9039 6200471 YP_001833457.1 CDS Bind_2356 NC_010581.1 2696005 2696700 D PFAM: Glutathione S-transferase domain; KEGG: mag:amb2655 glutathione S-transferase; glutathione S-transferase domain-containing protein 2696005..2696700 Beijerinckia indica subsp. indica ATCC 9039 6199870 YP_001833458.1 CDS Bind_2357 NC_010581.1 2696697 2697413 D PFAM: Glutathione S-transferase domain; KEGG: acr:Acry_3099 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 2696697..2697413 Beijerinckia indica subsp. indica ATCC 9039 6201361 YP_001833459.1 CDS Bind_2358 NC_010581.1 2697558 2697830 D hypothetical protein 2697558..2697830 Beijerinckia indica subsp. indica ATCC 9039 6199659 YP_001833460.1 CDS Bind_2359 NC_010581.1 2697872 2699170 R KEGG: dra:DR_1169 hypothetical protein; hypothetical protein complement(2697872..2699170) Beijerinckia indica subsp. indica ATCC 9039 6198602 YP_001833461.1 CDS Bind_2360 NC_010581.1 2699178 2700257 R KEGG: pca:Pcar_0522 ATPase, AAA superfamily; hypothetical protein complement(2699178..2700257) Beijerinckia indica subsp. indica ATCC 9039 6199484 YP_001833462.1 CDS Bind_2361 NC_010581.1 2700290 2700745 R hypothetical protein complement(2700290..2700745) Beijerinckia indica subsp. indica ATCC 9039 6198868 YP_001833463.1 CDS Bind_2362 NC_010581.1 2701085 2701282 D KEGG: azc:AZC_1023 hypothetical protein; hypothetical protein 2701085..2701282 Beijerinckia indica subsp. indica ATCC 9039 6199110 YP_001833464.1 CDS Bind_2363 NC_010581.1 2701263 2702786 D PFAM: Na+/solute symporter; KEGG: bja:bll5890 monocarboxylic acid permease; Na+/solute symporter 2701263..2702786 Beijerinckia indica subsp. indica ATCC 9039 6198631 YP_001833465.1 CDS Bind_2364 NC_010581.1 2702935 2703480 R PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02834 probable acetyltransferase protein; N-acetyltransferase GCN5 complement(2702935..2703480) Beijerinckia indica subsp. indica ATCC 9039 6199239 YP_001833466.1 CDS Bind_2365 NC_010581.1 2703732 2704706 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3302 putative aliphatic sulfonates-binding protein precursor (SsuA protein); aliphatic sulfonate ABC transporter substrate-binding protein complement(2703732..2704706) Beijerinckia indica subsp. indica ATCC 9039 6199234 YP_001833467.1 CDS Bind_2367 NC_010581.1 2706084 2706512 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bja:blr0943 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2706084..2706512) Beijerinckia indica subsp. indica ATCC 9039 6199675 YP_001833468.1 CDS thrS NC_010581.1 2706704 2708638 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2706704..2708638) Beijerinckia indica subsp. indica ATCC 9039 6201169 YP_001833469.1 CDS Bind_2369 NC_010581.1 2708798 2709004 R hypothetical protein complement(2708798..2709004) Beijerinckia indica subsp. indica ATCC 9039 6201050 YP_001833470.1 CDS Bind_2370 NC_010581.1 2709134 2710678 D PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: cak:Caul_4624 adenylate cyclase; adenylate cyclase 2709134..2710678 Beijerinckia indica subsp. indica ATCC 9039 6198806 YP_001833471.1 CDS Bind_2371 NC_010581.1 2710909 2711244 D KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein 2710909..2711244 Beijerinckia indica subsp. indica ATCC 9039 6199177 YP_001833472.1 CDS Bind_2372 NC_010581.1 2711584 2711814 D hypothetical protein 2711584..2711814 Beijerinckia indica subsp. indica ATCC 9039 6200212 YP_001833473.1 CDS Bind_2373 NC_010581.1 2712034 2712447 D KEGG: nwi:Nwi_0593 hypothetical protein; hypothetical protein 2712034..2712447 Beijerinckia indica subsp. indica ATCC 9039 6200337 YP_001833474.1 CDS Bind_2374 NC_010581.1 2712702 2712941 R hypothetical protein complement(2712702..2712941) Beijerinckia indica subsp. indica ATCC 9039 6200901 YP_001833475.1 CDS Bind_2375 NC_010581.1 2713045 2714514 D KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 2713045..2714514 Beijerinckia indica subsp. indica ATCC 9039 6198715 YP_001833476.1 CDS Bind_2376 NC_010581.1 2714654 2716240 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: azc:AZC_2390 pseudouridine synthase; RNA-binding S4 domain-containing protein 2714654..2716240 Beijerinckia indica subsp. indica ATCC 9039 6199487 YP_001833477.1 CDS Bind_2377 NC_010581.1 2716363 2717376 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pnu:Pnuc_1328 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2716363..2717376 Beijerinckia indica subsp. indica ATCC 9039 6199902 YP_001833478.1 CDS Bind_2378 NC_010581.1 2717467 2718039 D TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: xau:Xaut_3093 putative methyltransferase; methyltransferase 2717467..2718039 Beijerinckia indica subsp. indica ATCC 9039 6200565 YP_001833479.1 CDS Bind_2379 NC_010581.1 2718203 2718523 D KEGG: bra:BRADO1847 hypothetical protein; hypothetical protein 2718203..2718523 Beijerinckia indica subsp. indica ATCC 9039 6199152 YP_001833480.1 CDS Bind_2380 NC_010581.1 2718592 2720940 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bra:BRADO4157 putative TonB dependent receptor; TonB-dependent receptor complement(2718592..2720940) Beijerinckia indica subsp. indica ATCC 9039 6201355 YP_001833481.1 CDS Bind_2381 NC_010581.1 2721073 2721426 R KEGG: rpb:RPB_3553 hypothetical protein; hypothetical protein complement(2721073..2721426) Beijerinckia indica subsp. indica ATCC 9039 6201681 YP_001833482.1 CDS Bind_2382 NC_010581.1 2721601 2722218 R PFAM: electron transport protein SCO1/SenC; KEGG: mes:Meso_1992 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(2721601..2722218) Beijerinckia indica subsp. indica ATCC 9039 6200559 YP_001833483.1 CDS Bind_2383 NC_010581.1 2722330 2724000 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(2722330..2724000) Beijerinckia indica subsp. indica ATCC 9039 6199123 YP_001833484.1 CDS Bind_2384 NC_010581.1 2724153 2724947 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mes:Meso_1036 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase complement(2724153..2724947) Beijerinckia indica subsp. indica ATCC 9039 6199889 YP_001833485.1 CDS Bind_2385 NC_010581.1 2725011 2726444 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bra:BRADO4171 NADH dehydrogenase subunit N; proton-translocating NADH-quinone oxidoreductase subunit N complement(2725011..2726444) Beijerinckia indica subsp. indica ATCC 9039 6201143 YP_001833486.1 CDS Bind_2386 NC_010581.1 2726557 2728080 R KEGG: xau:Xaut_4621 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(2726557..2728080) Beijerinckia indica subsp. indica ATCC 9039 6199627 YP_001833487.1 CDS Bind_2387 NC_010581.1 2728080 2730080 R KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(2728080..2730080) Beijerinckia indica subsp. indica ATCC 9039 6199698 YP_001833488.1 CDS Bind_2388 NC_010581.1 2730088 2730396 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: smd:Smed_0900 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(2730088..2730396) Beijerinckia indica subsp. indica ATCC 9039 6200090 YP_001833489.1 CDS Bind_2389 NC_010581.1 2730422 2731030 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(2730422..2731030) Beijerinckia indica subsp. indica ATCC 9039 6199554 YP_001833490.1 CDS Bind_2390 NC_010581.1 2731041 2731529 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(2731041..2731529) Beijerinckia indica subsp. indica ATCC 9039 6199402 YP_001833491.1 CDS Bind_2391 NC_010581.1 2731596 2732624 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(2731596..2732624) Beijerinckia indica subsp. indica ATCC 9039 6200871 YP_001833492.1 CDS Bind_2392 NC_010581.1 2732648 2734708 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(2732648..2734708) Beijerinckia indica subsp. indica ATCC 9039 6200163 YP_001833493.1 CDS Bind_2393 NC_010581.1 2734788 2735120 R KEGG: rpc:RPC_2139 hypothetical protein; hypothetical protein complement(2734788..2735120) Beijerinckia indica subsp. indica ATCC 9039 6199021 YP_001833494.1 CDS Bind_2394 NC_010581.1 2735126 2736436 R part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(2735126..2736436) Beijerinckia indica subsp. indica ATCC 9039 6201813 YP_001833495.1 CDS Bind_2395 NC_010581.1 2736451 2737119 R KEGG: xau:Xaut_4629 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E complement(2736451..2737119) Beijerinckia indica subsp. indica ATCC 9039 6201756 YP_001833496.1 CDS Bind_2396 NC_010581.1 2737160 2738350 R KEGG: xau:Xaut_4630 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D complement(2737160..2738350) Beijerinckia indica subsp. indica ATCC 9039 6200274 YP_001833497.1 CDS Bind_2397 NC_010581.1 2738401 2739039 R KEGG: xau:Xaut_4631 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C complement(2738401..2739039) Beijerinckia indica subsp. indica ATCC 9039 6201370 YP_001833498.1 CDS Bind_2398 NC_010581.1 2739099 2739641 R KEGG: mex:Mext_1084 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B complement(2739099..2739641) Beijerinckia indica subsp. indica ATCC 9039 6200103 YP_001833499.1 CDS Bind_2399 NC_010581.1 2739632 2739997 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mex:Mext_1085 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 complement(2739632..2739997) Beijerinckia indica subsp. indica ATCC 9039 6199821 YP_001833500.1 CDS Bind_2400 NC_010581.1 2741103 2741750 R KEGG: bbt:BBta_5203 hypothetical protein; periplasmic protein-like protein complement(2741103..2741750) Beijerinckia indica subsp. indica ATCC 9039 6199398 YP_001833501.1 CDS Bind_2401 NC_010581.1 2742283 2742597 R KEGG: bra:BRADO5430 hypothetical protein; hypothetical protein complement(2742283..2742597) Beijerinckia indica subsp. indica ATCC 9039 6200182 YP_001833502.1 CDS Bind_2402 NC_010581.1 2742723 2743226 R KEGG: bra:BRADO5401 conserved hypothetical protein (TPR repeat); hypothetical protein complement(2742723..2743226) Beijerinckia indica subsp. indica ATCC 9039 6200883 YP_001833503.1 CDS Bind_2403 NC_010581.1 2743478 2744509 D KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 2743478..2744509 Beijerinckia indica subsp. indica ATCC 9039 6200458 YP_001833504.1 CDS Bind_2404 NC_010581.1 2745057 2746046 D KEGG: mex:Mext_0531 hypothetical protein; hypothetical protein 2745057..2746046 Beijerinckia indica subsp. indica ATCC 9039 6201185 YP_001833505.1 CDS alaS NC_010581.1 2746302 2749007 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2746302..2749007 Beijerinckia indica subsp. indica ATCC 9039 6199545 YP_001833506.1 CDS Bind_2406 NC_010581.1 2749194 2749373 D PFAM: protein of unknown function DUF1328; KEGG: mes:Meso_3110 protein of unknown function DUF1328; hypothetical protein 2749194..2749373 Beijerinckia indica subsp. indica ATCC 9039 6200550 YP_001833507.1 CDS Bind_2407 NC_010581.1 2749680 2750084 D KEGG: azc:AZC_1593 hypothetical protein; hypothetical protein 2749680..2750084 Beijerinckia indica subsp. indica ATCC 9039 6200429 YP_001833508.1 CDS Bind_2408 NC_010581.1 2750295 2750810 D PFAM: Phosphoglycerate mutase; KEGG: azc:AZC_1661 phosphohistidine phosphatase; putative phosphohistidine phosphatase SixA 2750295..2750810 Beijerinckia indica subsp. indica ATCC 9039 6200556 YP_001833509.1 CDS Bind_2409 NC_010581.1 2750951 2752102 D KEGG: mex:Mext_4626 hypothetical protein; hypothetical protein 2750951..2752102 Beijerinckia indica subsp. indica ATCC 9039 6201198 YP_001833510.1 CDS Bind_2410 NC_010581.1 2752226 2753707 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rpc:RPC_4270 protein of unknown function DUF463, YcjX-like protein; hypothetical protein 2752226..2753707 Beijerinckia indica subsp. indica ATCC 9039 6201478 YP_001833511.1 CDS Bind_2411 NC_010581.1 2753707 2754798 D PFAM: conserved hypothetical protein; KEGG: mes:Meso_1416 conserved hypothetical protein 1620; hypothetical protein 2753707..2754798 Beijerinckia indica subsp. indica ATCC 9039 6200431 YP_001833512.1 CDS Bind_2413 NC_010581.1 2756047 2756436 R PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3072 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(2756047..2756436) Beijerinckia indica subsp. indica ATCC 9039 6200222 YP_001833513.1 CDS Bind_2414 NC_010581.1 2756438 2756689 R KEGG: rpc:RPC_3073 plasmid stabilization system; plasmid stabilization system protein complement(2756438..2756689) Beijerinckia indica subsp. indica ATCC 9039 6201033 YP_001833514.1 CDS Bind_2415 NC_010581.1 2756777 2757763 R PFAM: Mg2 transporter protein CorA family protein; KEGG: dac:Daci_3048 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein complement(2756777..2757763) Beijerinckia indica subsp. indica ATCC 9039 6199995 YP_001833515.1 CDS Bind_2416 NC_010581.1 2758065 2758640 R KEGG: rpe:RPE_3533 hypothetical protein; hypothetical protein complement(2758065..2758640) Beijerinckia indica subsp. indica ATCC 9039 6200782 YP_001833516.1 CDS Bind_2418 NC_010581.1 2759397 2760416 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2759397..2760416) Beijerinckia indica subsp. indica ATCC 9039 6199835 YP_001833517.1 CDS Bind_2419 NC_010581.1 2760553 2761107 R TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rpe:RPE_2189 acetolactate synthase, small subunit; acetolactate synthase small subunit complement(2760553..2761107) Beijerinckia indica subsp. indica ATCC 9039 6200313 YP_001833518.1 CDS Bind_2420 NC_010581.1 2761107 2762867 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(2761107..2762867) Beijerinckia indica subsp. indica ATCC 9039 6199548 YP_001833519.1 CDS Bind_2421 NC_010581.1 2764292 2764744 R PFAM: helix-turn-helix domain protein; KEGG: btr:Btr_0553 hypothetical protein; XRE family transcriptional regulator complement(2764292..2764744) Beijerinckia indica subsp. indica ATCC 9039 6201526 YP_001833520.1 CDS Bind_2422 NC_010581.1 2765385 2765693 D hypothetical protein 2765385..2765693 Beijerinckia indica subsp. indica ATCC 9039 6201729 YP_001833521.1 CDS Bind_2423 NC_010581.1 2765697 2766188 D KEGG: oan:Oant_1534 hypothetical protein; hypothetical protein 2765697..2766188 Beijerinckia indica subsp. indica ATCC 9039 6200981 YP_001833522.1 CDS Bind_2424 NC_010581.1 2766370 2767020 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: amr:AM1_1199 thiopurine S-methyltransferase, putative; type 11 methyltransferase 2766370..2767020 Beijerinckia indica subsp. indica ATCC 9039 6200034 YP_001833523.1 CDS Bind_2425 NC_010581.1 2767027 2767500 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc00385 hypothetical protein; ybaK/ebsC protein 2767027..2767500 Beijerinckia indica subsp. indica ATCC 9039 6199272 YP_001833524.1 CDS Bind_2426 NC_010581.1 2767510 2767968 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(2767510..2767968) Beijerinckia indica subsp. indica ATCC 9039 6201527 YP_001833525.1 CDS Bind_2427 NC_010581.1 2768304 2769656 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: nwi:Nwi_1912 putative manganese transport protein MntH; manganese transport protein MntH 2768304..2769656 Beijerinckia indica subsp. indica ATCC 9039 6200309 YP_001833526.1 CDS Bind_2428 NC_010581.1 2769715 2771592 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_4267 ABC transporter related; ABC transporter-like protein complement(2769715..2771592) Beijerinckia indica subsp. indica ATCC 9039 6199124 YP_001833527.1 CDS Bind_2429 NC_010581.1 2771749 2773260 R KEGG: gox:GOX0651 hypothetical protein; hypothetical protein complement(2771749..2773260) Beijerinckia indica subsp. indica ATCC 9039 6199810 YP_001833528.1 CDS Bind_2430 NC_010581.1 2773787 2774341 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bcs:BCAN_B0712 thioredoxin peroxidase 2; alkyl hydroperoxide reductase 2773787..2774341 Beijerinckia indica subsp. indica ATCC 9039 6200002 YP_001833529.1 CDS Bind_2431 NC_010581.1 2774468 2775010 D TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpe:RPE_4514 alkylhydroperoxidase, AhpD family; alkylhydroperoxidase 2774468..2775010 Beijerinckia indica subsp. indica ATCC 9039 6200126 YP_001833530.1 CDS Bind_2432 NC_010581.1 2775084 2776046 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xfa:XF1532 oxidative stress transcriptional regulator; LysR family transcriptional regulator complement(2775084..2776046) Beijerinckia indica subsp. indica ATCC 9039 6201117 YP_001833531.1 CDS ndk NC_010581.1 2776167 2776589 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2776167..2776589 Beijerinckia indica subsp. indica ATCC 9039 6199118 YP_001833532.1 CDS Bind_2434 NC_010581.1 2776609 2777415 D PFAM: inositol monophosphatase; KEGG: saq:Sare_0440 inositol monophosphatase; inositol monophosphatase 2776609..2777415 Beijerinckia indica subsp. indica ATCC 9039 6201247 YP_001833533.1 CDS Bind_2435 NC_010581.1 2777501 2778796 D PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_4766 major facilitator superfamily MFS_1; major facilitator transporter 2777501..2778796 Beijerinckia indica subsp. indica ATCC 9039 6199240 YP_001833534.1 CDS Bind_2436 NC_010581.1 2778793 2779626 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_3195 ABC transporter related; ABC transporter-like protein complement(2778793..2779626) Beijerinckia indica subsp. indica ATCC 9039 6200027 YP_001833535.1 CDS Bind_2437 NC_010581.1 2779630 2780466 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpe:RPE_3194 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2779630..2780466) Beijerinckia indica subsp. indica ATCC 9039 6200769 YP_001833536.1 CDS Bind_2438 NC_010581.1 2780522 2781490 R KEGG: rpe:RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein complement(2780522..2781490) Beijerinckia indica subsp. indica ATCC 9039 6199490 YP_001833537.1 CDS Bind_2439 NC_010581.1 2781885 2782322 D PFAM: CBS domain containing protein; KEGG: mes:Meso_2788 CBS domain containing protein; hypothetical protein 2781885..2782322 Beijerinckia indica subsp. indica ATCC 9039 6200576 YP_001833538.1 CDS Bind_2440 NC_010581.1 2782446 2783396 R TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era; GTP-binding protein Era complement(2782446..2783396) Beijerinckia indica subsp. indica ATCC 9039 6200908 YP_001833539.1 CDS Bind_2441 NC_010581.1 2783393 2784100 R PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: xau:Xaut_3881 ribonuclease III; ribonuclease III complement(2783393..2784100) Beijerinckia indica subsp. indica ATCC 9039 6199543 YP_001833540.1 CDS Bind_2442 NC_010581.1 2784101 2784907 R KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(2784101..2784907) Beijerinckia indica subsp. indica ATCC 9039 6199274 YP_001833541.1 CDS Bind_2443 NC_010581.1 2785088 2785510 R KEGG: sme:SMc02654 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase complement(2785088..2785510) Beijerinckia indica subsp. indica ATCC 9039 6199669 YP_001833542.1 CDS Bind_2444 NC_010581.1 2785516 2786298 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(2785516..2786298) Beijerinckia indica subsp. indica ATCC 9039 6200358 YP_001833543.1 CDS Bind_2445 NC_010581.1 2786298 2788511 R KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(2786298..2788511) Beijerinckia indica subsp. indica ATCC 9039 6199537 YP_001833544.1 CDS Bind_2446 NC_010581.1 2788618 2789013 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2788618..2789013) Beijerinckia indica subsp. indica ATCC 9039 6200364 YP_001833545.1 CDS Bind_2447 NC_010581.1 2789683 2790294 D PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 protein of unknown function DUF88; hypothetical protein 2789683..2790294 Beijerinckia indica subsp. indica ATCC 9039 6200359 YP_001833546.1 CDS Bind_2448 NC_010581.1 2790354 2791064 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: nha:Nham_2258 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 2790354..2791064 Beijerinckia indica subsp. indica ATCC 9039 6199971 YP_001833547.1 CDS Bind_2449 NC_010581.1 2791097 2794288 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(2791097..2794288) Beijerinckia indica subsp. indica ATCC 9039 6200031 YP_001833548.1 CDS Bind_2450 NC_010581.1 2794293 2795414 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll5081 putative multidrug resistance protein; RND family efflux transporter MFP subunit complement(2794293..2795414) Beijerinckia indica subsp. indica ATCC 9039 6199703 YP_001833549.1 CDS Bind_2451 NC_010581.1 2796143 2796619 D KEGG: nha:Nham_0878 hypothetical protein; hypothetical protein 2796143..2796619 Beijerinckia indica subsp. indica ATCC 9039 6201183 YP_001833550.1 CDS Bind_2452 NC_010581.1 2796740 2798980 D KEGG: bja:blr3456 hypothetical protein; hypothetical protein 2796740..2798980 Beijerinckia indica subsp. indica ATCC 9039 6198905 YP_001833551.1 CDS Bind_2453 NC_010581.1 2799039 2800016 D PFAM: phosphate acetyl/butaryl transferase; KEGG: bch:Bcen2424_4872 phosphate acetyltransferase; phosphate acetyltransferase 2799039..2800016 Beijerinckia indica subsp. indica ATCC 9039 6200502 YP_001833552.1 CDS Bind_2454 NC_010581.1 2800239 2801483 D PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1474 STE24 endopeptidase; Ste24 endopeptidase 2800239..2801483 Beijerinckia indica subsp. indica ATCC 9039 6201184 YP_001833553.1 CDS Bind_2455 NC_010581.1 2801562 2802383 R PFAM: NLPA lipoprotein; KEGG: bmu:Bmul_3391 NlpA lipoprotein; NLPA lipoprotein complement(2801562..2802383) Beijerinckia indica subsp. indica ATCC 9039 6199706 YP_001833554.1 CDS Bind_2456 NC_010581.1 2802442 2803104 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3692 putative ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(2802442..2803104) Beijerinckia indica subsp. indica ATCC 9039 6200067 YP_001833555.1 CDS Bind_2457 NC_010581.1 2803094 2804200 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3691 ABC transporter ATP-binding protein; ABC transporter-like protein complement(2803094..2804200) Beijerinckia indica subsp. indica ATCC 9039 6200948 YP_001833556.1 CDS Bind_2458 NC_010581.1 2804534 2806327 D hypothetical protein 2804534..2806327 Beijerinckia indica subsp. indica ATCC 9039 6200837 YP_001833557.1 CDS Bind_2459 NC_010581.1 2806410 2808179 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH); mannitol dehydrogenase domain-containing protein complement(2806410..2808179) Beijerinckia indica subsp. indica ATCC 9039 6201699 YP_001833558.1 CDS Bind_2460 NC_010581.1 2808487 2809497 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_3278 ATP-binding transport protein SmoK (POLK); ABC transporter-like protein complement(2808487..2809497) Beijerinckia indica subsp. indica ATCC 9039 6201373 YP_001833559.1 CDS Bind_2461 NC_010581.1 2809509 2810339 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4216 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein complement(2809509..2810339) Beijerinckia indica subsp. indica ATCC 9039 6200898 YP_001833560.1 CDS Bind_2462 NC_010581.1 2810343 2811215 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4217 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein complement(2810343..2811215) Beijerinckia indica subsp. indica ATCC 9039 6201479 YP_001833561.1 CDS Bind_2463 NC_010581.1 2811502 2812815 R PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL4218 putative mannitol-binding component of ABC transporter; extracellular solute-binding protein complement(2811502..2812815) Beijerinckia indica subsp. indica ATCC 9039 6200978 YP_001833562.1 CDS Bind_2464 NC_010581.1 2813026 2814480 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_CH03649 xylulokinase protein; xylulokinase 2813026..2814480 Beijerinckia indica subsp. indica ATCC 9039 6200896 YP_001833563.1 CDS Bind_2465 NC_010581.1 2814611 2815174 D PFAM: AIG2 family protein; KEGG: cyb:CYB_1529 hypothetical protein; AIG2 family protein 2814611..2815174 Beijerinckia indica subsp. indica ATCC 9039 6199966 YP_001833564.1 CDS Bind_2466 NC_010581.1 2815258 2815539 D TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: ret:RHE_CH00244 hypothetical protein; putative selenoprotein 2815258..2815539 Beijerinckia indica subsp. indica ATCC 9039 6199539 YP_001833565.1 CDS Bind_2467 NC_010581.1 2816094 2816687 R hypothetical protein complement(2816094..2816687) Beijerinckia indica subsp. indica ATCC 9039 6199899 YP_001833566.1 CDS Bind_2469 NC_010581.1 2817621 2818562 R PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: cak:Caul_2635 transglutaminase domain protein; transglutaminase domain-containing protein complement(2817621..2818562) Beijerinckia indica subsp. indica ATCC 9039 6199199 YP_001833567.1 CDS Bind_2470 NC_010581.1 2818991 2822359 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3754 transglutaminase-like domain; transglutaminase domain-containing protein 2818991..2822359 Beijerinckia indica subsp. indica ATCC 9039 6200921 YP_001833568.1 CDS Bind_2471 NC_010581.1 2822467 2823372 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_1679 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2822467..2823372) Beijerinckia indica subsp. indica ATCC 9039 6199500 YP_001833569.1 CDS Bind_2472 NC_010581.1 2823528 2824787 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:Pfl_1664 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2823528..2824787 Beijerinckia indica subsp. indica ATCC 9039 6199198 YP_001833570.1 CDS Bind_2473 NC_010581.1 2825069 2825380 D SMART: helix-turn-helix domain protein; KEGG: bja:bll6346 hypothetical protein; helix-turn-helix domain-containing protein 2825069..2825380 Beijerinckia indica subsp. indica ATCC 9039 6199580 YP_001833571.1 CDS Bind_2474 NC_010581.1 2825386 2827395 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rle:pRL110297 hydrogenase 4 subunit B; hydrogenase 4 subunit B 2825386..2827395 Beijerinckia indica subsp. indica ATCC 9039 6199925 YP_001833572.1 CDS Bind_2475 NC_010581.1 2827386 2828342 D KEGG: azc:AZC_4359 NADH dehydrogenase; NADH dehydrogenase 2827386..2828342 Beijerinckia indica subsp. indica ATCC 9039 6200349 YP_001833573.1 CDS Bind_2476 NC_010581.1 2828343 2829005 D KEGG: bja:blr6341 hypothetical protein; hypothetical protein 2828343..2829005 Beijerinckia indica subsp. indica ATCC 9039 6200846 YP_001833574.1 CDS Bind_2477 NC_010581.1 2829002 2830447 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rle:pRL110294 hydrogenase 4 subunit F; hydrogenase 4 subunit F 2829002..2830447 Beijerinckia indica subsp. indica ATCC 9039 6200114 YP_001833575.1 CDS Bind_2478 NC_010581.1 2830510 2831988 D PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rle:pRL110293 putative formate hydrogenlyase subunit 5 precursor; NADH dehydrogenase (quinone) 2830510..2831988 Beijerinckia indica subsp. indica ATCC 9039 6199885 YP_001833576.1 CDS Bind_2479 NC_010581.1 2832000 2832533 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: xau:Xaut_0171 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2832000..2832533 Beijerinckia indica subsp. indica ATCC 9039 6201368 YP_001833577.1 CDS Bind_2480 NC_010581.1 2832632 2833696 D PFAM: integrase family protein; KEGG: xau:Xaut_4792 integrase family protein; integrase family protein 2832632..2833696 Beijerinckia indica subsp. indica ATCC 9039 6198413 YP_001833578.1 CDS Bind_2481 NC_010581.1 2833752 2834765 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: oan:Oant_0293 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(2833752..2834765) Beijerinckia indica subsp. indica ATCC 9039 6201171 YP_001833579.1 CDS Bind_2482 NC_010581.1 2834934 2835983 D PFAM: PfkB domain protein; KEGG: oan:Oant_0289 PfkB domain protein; ribokinase-like domain-containing protein 2834934..2835983 Beijerinckia indica subsp. indica ATCC 9039 6201156 YP_001833580.1 CDS Bind_2483 NC_010581.1 2835938 2836810 D PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: oan:Oant_0288 tagatose-6-phosphate kinase; tagatose-6-phosphate kinase 2835938..2836810 Beijerinckia indica subsp. indica ATCC 9039 6201087 YP_001833581.1 CDS Bind_2484 NC_010581.1 2836807 2837508 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO3430 putative haloacid dehalogenase-like hydrolase family protein; HAD family hydrolase 2836807..2837508 Beijerinckia indica subsp. indica ATCC 9039 6199638 YP_001833582.1 CDS Bind_2486 NC_010581.1 2838321 2839850 D KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 2838321..2839850 Beijerinckia indica subsp. indica ATCC 9039 6200085 YP_001833583.1 CDS Bind_2487 NC_010581.1 2840040 2840897 R KEGG: ret:RHE_CH02644 hypothetical protein; hypothetical protein complement(2840040..2840897) Beijerinckia indica subsp. indica ATCC 9039 6200972 YP_001833584.1 CDS Bind_2488 NC_010581.1 2840894 2842099 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ret:RHE_CH02643 ferredoxin reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2840894..2842099) Beijerinckia indica subsp. indica ATCC 9039 6199572 YP_001833585.1 CDS Bind_2489 NC_010581.1 2842124 2843068 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH02642 rhizopine ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2842124..2843068) Beijerinckia indica subsp. indica ATCC 9039 6201018 YP_001833586.1 CDS Bind_2490 NC_010581.1 2843247 2843558 R TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMa2053 MocE-like protein; Rieske (2Fe-2S) domain-containing protein complement(2843247..2843558) Beijerinckia indica subsp. indica ATCC 9039 6200024 YP_001833587.1 CDS Bind_2491 NC_010581.1 2843555 2844589 R PFAM: fatty acid hydroxylase; KEGG: ret:RHE_CH02640 probable desaturase protein; fatty acid hydroxylase complement(2843555..2844589) Beijerinckia indica subsp. indica ATCC 9039 6199571 YP_001833588.1 CDS Bind_2492 NC_010581.1 2844765 2845766 R PFAM: regulatory protein LacI; KEGG: sme:SMa2049 putative LacI-family transcription regulator; LacI family transcriptional regulator complement(2844765..2845766) Beijerinckia indica subsp. indica ATCC 9039 6200780 YP_001833589.1 CDS Bind_2493 NC_010581.1 2845881 2846831 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5967 putative transcriptional regulatory protein AraC/XylS family; AraC family transcriptional regulator complement(2845881..2846831) Beijerinckia indica subsp. indica ATCC 9039 6201237 YP_001833590.1 CDS Bind_2494 NC_010581.1 2846998 2847381 D KEGG: pha:PSHAb0115 putative enzyme protein; hypothetical protein 2846998..2847381 Beijerinckia indica subsp. indica ATCC 9039 6199804 YP_001833591.1 CDS Bind_2495 NC_010581.1 2847395 2848504 D TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:glr4425 glutathione dependent formaldehyde dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2847395..2848504 Beijerinckia indica subsp. indica ATCC 9039 6199881 YP_001833592.1 CDS Bind_2496 NC_010581.1 2848504 2849346 D KEGG: bmu:Bmul_0694 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 2848504..2849346 Beijerinckia indica subsp. indica ATCC 9039 6199752 YP_001833593.1 CDS Bind_2497 NC_010581.1 2849576 2849848 D KEGG: bbt:BBta_4248 hypothetical protein; hypothetical protein 2849576..2849848 Beijerinckia indica subsp. indica ATCC 9039 6200758 YP_001833594.1 CDS Bind_2498 NC_010581.1 2850200 2850742 D KEGG: pde:Pden_1062 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 2850200..2850742 Beijerinckia indica subsp. indica ATCC 9039 6201196 YP_001833595.1 CDS Bind_2499 NC_010581.1 2850913 2851749 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gox:GOX2105 transcriptional regulator; LysR family transcriptional regulator 2850913..2851749 Beijerinckia indica subsp. indica ATCC 9039 6199584 YP_001833596.1 CDS Bind_2500 NC_010581.1 2851891 2853624 D PFAM: major facilitator superfamily MFS_1; KEGG: gox:GOX2104 putative transport protein; major facilitator transporter 2851891..2853624 Beijerinckia indica subsp. indica ATCC 9039 6200202 YP_001833597.1 CDS Bind_2501 NC_010581.1 2853637 2854713 D PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0236 putative secretion protein, HlyD-family; secretion protein HlyD family protein 2853637..2854713 Beijerinckia indica subsp. indica ATCC 9039 6200891 YP_001833598.1 CDS Bind_2502 NC_010581.1 2854700 2856301 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0997 putative outer membrane protein OprJ; RND efflux system outer membrane lipoprotein 2854700..2856301 Beijerinckia indica subsp. indica ATCC 9039 6201363 YP_001833599.1 CDS Bind_2503 NC_010581.1 2856619 2857077 D PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 2856619..2857077 Beijerinckia indica subsp. indica ATCC 9039 6200115 YP_001833600.1 CDS Bind_2504 NC_010581.1 2857118 2858173 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(2857118..2858173) Beijerinckia indica subsp. indica ATCC 9039 6198940 YP_001833601.1 CDS Bind_2505 NC_010581.1 2858186 2858935 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gvi:gll1228 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2858186..2858935) Beijerinckia indica subsp. indica ATCC 9039 6200449 YP_001833602.1 CDS Bind_2506 NC_010581.1 2859427 2860302 D Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 2859427..2860302 Beijerinckia indica subsp. indica ATCC 9039 6199641 YP_001833603.1 CDS Bind_2507 NC_010581.1 2860299 2861018 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_2247 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2860299..2861018 Beijerinckia indica subsp. indica ATCC 9039 6201037 YP_001833604.1 CDS Bind_2508 NC_010581.1 2861116 2861388 D KEGG: reh:H16_B1343 short-chain dehydrogenase of various substrate specificities; short-chain dehydrogenase of various substrate specificities 2861116..2861388 Beijerinckia indica subsp. indica ATCC 9039 6200726 YP_001833605.1 CDS Bind_2510 NC_010581.1 2862487 2864205 D PFAM: Na+/Picotransporter; KEGG: sil:SPO0209 Na/Pi-cotransporter family protein; Na+/H+ antiporter 2862487..2864205 Beijerinckia indica subsp. indica ATCC 9039 6199920 YP_001833606.1 CDS Bind_2512 NC_010581.1 2866986 2867516 D PFAM: conserved hypothetical protein; KEGG: ccr:CC_1036 hypothetical protein; hypothetical protein 2866986..2867516 Beijerinckia indica subsp. indica ATCC 9039 6200946 YP_001833607.1 CDS Bind_2513 NC_010581.1 2867619 2868683 R KEGG: mpt:Mpe_A0156 hypothetical protein; hypothetical protein complement(2867619..2868683) Beijerinckia indica subsp. indica ATCC 9039 6200106 YP_001833608.1 CDS Bind_2514 NC_010581.1 2868929 2869504 D KEGG: gdi:GDI0537 hypothetical protein; TetR family transcriptional regulator 2868929..2869504 Beijerinckia indica subsp. indica ATCC 9039 6200803 YP_001833609.1 CDS Bind_2516 NC_010581.1 2871072 2872145 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: oih:OB3053 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase complement(2871072..2872145) Beijerinckia indica subsp. indica ATCC 9039 6199996 YP_001833610.1 CDS Bind_2519 NC_010581.1 2875006 2875701 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_0960 iron (III) ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2875006..2875701) Beijerinckia indica subsp. indica ATCC 9039 6201354 YP_001833611.1 CDS Bind_2520 NC_010581.1 2875698 2877284 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0959 iron (III) ABC transporter, permease; binding-protein-dependent transport system inner membrane protein complement(2875698..2877284) Beijerinckia indica subsp. indica ATCC 9039 6199947 YP_001833612.1 CDS Bind_2521 NC_010581.1 2877287 2878309 R PFAM: extracellular solute-binding protein family 1; KEGG: sun:SUN_0958 iron (III) ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2877287..2878309) Beijerinckia indica subsp. indica ATCC 9039 6199910 YP_001833613.1 CDS Bind_2522 NC_010581.1 2878395 2878964 R KEGG: pol:Bpro_2501 hypothetical protein; hypothetical protein complement(2878395..2878964) Beijerinckia indica subsp. indica ATCC 9039 6198808 YP_001833614.1 CDS Bind_2523 NC_010581.1 2879249 2880664 R TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: sme:SMc00808 putative chromate transport protein; chromate transporter complement(2879249..2880664) Beijerinckia indica subsp. indica ATCC 9039 6200363 YP_001833615.1 CDS Bind_2524 NC_010581.1 2880687 2881673 R KEGG: dvu:DVUA0094 ChrB protein; ChrB protein complement(2880687..2881673) Beijerinckia indica subsp. indica ATCC 9039 6200848 YP_001833616.1 CDS Bind_2525 NC_010581.1 2881827 2882297 D KEGG: bch:Bcen2424_5953 hypothetical protein; hypothetical protein 2881827..2882297 Beijerinckia indica subsp. indica ATCC 9039 6199499 YP_001833617.1 CDS Bind_2526 NC_010581.1 2882320 2882595 D KEGG: nha:Nham_1872 hypothetical protein; hypothetical protein 2882320..2882595 Beijerinckia indica subsp. indica ATCC 9039 6200895 YP_001833618.1 CDS Bind_2527 NC_010581.1 2882595 2883014 D KEGG: rme:Rmet_6198 hypothetical protein; hypothetical protein 2882595..2883014 Beijerinckia indica subsp. indica ATCC 9039 6199333 YP_001833619.1 CDS Bind_2528 NC_010581.1 2883094 2883978 D PFAM: protein of unknown function LppY and LpqO; KEGG: aba:Acid345_3442 protein of unknown function LppY and LpqO; hypothetical protein 2883094..2883978 Beijerinckia indica subsp. indica ATCC 9039 6198896 YP_001833620.1 CDS Bind_2529 NC_010581.1 2884096 2884689 D PFAM: manganese and iron superoxide dismutase; KEGG: bja:bll7559 probable Fe/Mn superoxide dismutase; manganese and iron superoxide dismutase 2884096..2884689 Beijerinckia indica subsp. indica ATCC 9039 6198892 YP_001833621.1 CDS Bind_2530 NC_010581.1 2884784 2886133 D PFAM: amino acid permease-associated region; KEGG: sen:SACE_3292 amino acid permease-associated region; amino acid permease-associated protein 2884784..2886133 Beijerinckia indica subsp. indica ATCC 9039 6198513 YP_001833622.1 CDS Bind_2531 NC_010581.1 2886248 2887471 D KEGG: rpe:RPE_0575 hypothetical protein; siderophore synthetase component-like protein 2886248..2887471 Beijerinckia indica subsp. indica ATCC 9039 6198441 YP_001833623.1 CDS Bind_2532 NC_010581.1 2887635 2888345 R KEGG: ret:RHE_PE00215 putative nickel ABC transporter, permease protein; putative nickel ABC transporter permease complement(2887635..2888345) Beijerinckia indica subsp. indica ATCC 9039 6199348 YP_001833624.1 CDS Bind_2533 NC_010581.1 2889053 2889580 R PFAM: MaoC domain protein dehydratase; KEGG: ypi:YpsIP31758_2157 MaoC domain protein; dehydratase complement(2889053..2889580) Beijerinckia indica subsp. indica ATCC 9039 6200562 YP_001833625.1 CDS Bind_2534 NC_010581.1 2889634 2890458 R PFAM: HpcH/HpaI aldolase; KEGG: yps:YPTB1926 putative citrate lyase beta chain; citryl-CoA lyase complement(2889634..2890458) Beijerinckia indica subsp. indica ATCC 9039 6199834 YP_001833626.1 CDS Bind_2535 NC_010581.1 2890731 2892050 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5395 major facilitator superfamily MFS_1; major facilitator transporter complement(2890731..2892050) Beijerinckia indica subsp. indica ATCC 9039 6200211 YP_001833627.1 CDS Bind_2536 NC_010581.1 2892101 2893285 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bcs:BCAN_B0166 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2892101..2893285) Beijerinckia indica subsp. indica ATCC 9039 6199022 YP_001833628.1 CDS Bind_2537 NC_010581.1 2893395 2894327 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding; LysR family transcriptional regulator 2893395..2894327 Beijerinckia indica subsp. indica ATCC 9039 6199853 YP_001833629.1 CDS Bind_2538 NC_010581.1 2894521 2894775 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rle:pRL90096 hypothetical protein; prevent-host-death family protein 2894521..2894775 Beijerinckia indica subsp. indica ATCC 9039 6199127 YP_001833630.1 CDS Bind_2539 NC_010581.1 2894775 2895185 D PFAM: PilT protein domain protein; KEGG: sme:SMa0453 Yle homolog, A. tumefaciens; PilT domain-containing protein 2894775..2895185 Beijerinckia indica subsp. indica ATCC 9039 6201238 YP_001833631.1 CDS Bind_2540 NC_010581.1 2895229 2896119 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3423 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2895229..2896119) Beijerinckia indica subsp. indica ATCC 9039 6199684 YP_001833632.1 CDS Bind_2541 NC_010581.1 2896270 2897319 D PFAM: Malate/L-lactate dehydrogenase; KEGG: bpt:Bpet3651 putative malate dehydrogenase; malate/L-lactate dehydrogenase 2896270..2897319 Beijerinckia indica subsp. indica ATCC 9039 6198736 YP_001833633.1 CDS Bind_2542 NC_010581.1 2897400 2898713 D PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4805 major facilitator superfamily MFS_1; major facilitator transporter 2897400..2898713 Beijerinckia indica subsp. indica ATCC 9039 6200129 YP_001833634.1 CDS Bind_2543 NC_010581.1 2898716 2900017 D KEGG: bld:BLi04142 YkgB; 3-carboxymuconate cyclase-like protein 2898716..2900017 Beijerinckia indica subsp. indica ATCC 9039 6198643 YP_001833635.1 CDS Bind_2544 NC_010581.1 2900396 2901937 D PFAM: porin; KEGG: mex:Mext_3186 porin; porin 2900396..2901937 Beijerinckia indica subsp. indica ATCC 9039 6200254 YP_001833636.1 CDS Bind_2545 NC_010581.1 2902136 2903353 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2902136..2903353 Beijerinckia indica subsp. indica ATCC 9039 6199901 YP_001833637.1 CDS Bind_2546 NC_010581.1 2903497 2905092 R PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_2772 probable oligopeptide binding protein AppA; extracellular solute-binding protein complement(2903497..2905092) Beijerinckia indica subsp. indica ATCC 9039 6200380 YP_001833638.1 CDS Bind_2547 NC_010581.1 2905105 2906709 R PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2585 putative ABC transporter, substrate binding subunit; extracellular solute-binding protein complement(2905105..2906709) Beijerinckia indica subsp. indica ATCC 9039 6198509 YP_001833639.1 CDS Bind_2548 NC_010581.1 2906932 2907918 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2660 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2906932..2907918 Beijerinckia indica subsp. indica ATCC 9039 6200842 YP_001833640.1 CDS Bind_2549 NC_010581.1 2907918 2908952 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2661 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2907918..2908952 Beijerinckia indica subsp. indica ATCC 9039 6201717 YP_001833641.1 CDS Bind_2550 NC_010581.1 2909030 2910280 D PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_2524 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 2909030..2910280 Beijerinckia indica subsp. indica ATCC 9039 6199283 YP_001833642.1 CDS Bind_2551 NC_010581.1 2910415 2911557 R PFAM: Rhodanese domain protein; KEGG: bbt:BBta_2586 putative thiosulfate sulfurtransferase; rhodanese domain-containing protein complement(2910415..2911557) Beijerinckia indica subsp. indica ATCC 9039 6199929 YP_001833643.1 CDS Bind_2552 NC_010581.1 2912094 2913095 D KEGG: sme:SMa2081 probable ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2912094..2913095 Beijerinckia indica subsp. indica ATCC 9039 6199280 YP_001833644.1 CDS Bind_2553 NC_010581.1 2913073 2914014 D KEGG: azc:AZC_2663 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2913073..2914014 Beijerinckia indica subsp. indica ATCC 9039 6198783 YP_001833645.1 CDS Bind_2554 NC_010581.1 2914186 2916771 D PFAM: TonB-dependent receptor; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 2914186..2916771 Beijerinckia indica subsp. indica ATCC 9039 6198763 YP_001833646.1 CDS Bind_2555 NC_010581.1 2916957 2919458 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA2335 probable TonB-dependent receptor; TonB-dependent receptor 2916957..2919458 Beijerinckia indica subsp. indica ATCC 9039 6200353 YP_001833647.1 CDS Bind_2556 NC_010581.1 2919731 2921098 D KEGG: mms:mma_0258 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 2919731..2921098 Beijerinckia indica subsp. indica ATCC 9039 6198418 YP_001833648.1 CDS Bind_2557 NC_010581.1 2921184 2921750 D KEGG: nwi:Nwi_2917 integrase, catalytic region; integrase catalytic subunit 2921184..2921750 Beijerinckia indica subsp. indica ATCC 9039 6198415 YP_001833649.1 CDS Bind_2558 NC_010581.1 2921833 2922405 R PFAM: regulatory protein TetR; KEGG: mlo:mlr5353 transcriptional regulator; TetR family transcriptional regulator complement(2921833..2922405) Beijerinckia indica subsp. indica ATCC 9039 6198933 YP_001833650.1 CDS Bind_2559 NC_010581.1 2922568 2922903 R hypothetical protein complement(2922568..2922903) Beijerinckia indica subsp. indica ATCC 9039 6199002 YP_001833651.1 CDS Bind_2560 NC_010581.1 2923125 2924408 R FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(2923125..2924408) Beijerinckia indica subsp. indica ATCC 9039 6198856 YP_001833652.1 CDS Bind_2561 NC_010581.1 2924431 2927547 R PFAM: acriflavin resistance protein; KEGG: ret:RHE_CH00528 probable cation/multidrug efflux transport protein; acriflavin resistance protein complement(2924431..2927547) Beijerinckia indica subsp. indica ATCC 9039 6198790 YP_001833653.1 CDS Bind_2562 NC_010581.1 2927547 2928662 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMa1885 putative membrane efflux protein; RND family efflux transporter MFP subunit complement(2927547..2928662) Beijerinckia indica subsp. indica ATCC 9039 6198789 YP_001833654.1 CDS Bind_2563 NC_010581.1 2928760 2929338 D PFAM: regulatory protein TetR; KEGG: sme:SMa1887 putative transcriptional regulator; TetR family transcriptional regulator 2928760..2929338 Beijerinckia indica subsp. indica ATCC 9039 6198772 YP_001833655.1 CDS Bind_2564 NC_010581.1 2929726 2930592 D PFAM: alpha/beta hydrolase fold; KEGG: ath:AT4G36530 hydrolase, alpha/beta fold family protein; alpha/beta hydrolase fold protein 2929726..2930592 Beijerinckia indica subsp. indica ATCC 9039 6198456 YP_001833656.1 CDS Bind_2565 NC_010581.1 2930697 2931170 D KEGG: pcr:Pcryo_1252 hypothetical protein; hypothetical protein 2930697..2931170 Beijerinckia indica subsp. indica ATCC 9039 6198461 YP_001833657.1 CDS Bind_2568 NC_010581.1 2932387 2933730 D KEGG: bra:BRADO4277 nitrilotriacetate monooxygenase component A (NtA monooxygenase component A) (NtA-MO A); nitrilotriacetate monooxygenase component A 2932387..2933730 Beijerinckia indica subsp. indica ATCC 9039 6199136 YP_001833658.1 CDS Bind_2569 NC_010581.1 2933748 2934827 D PFAM: aldo/keto reductase; KEGG: azc:AZC_2664 putative oxido-reductase; aldo/keto reductase 2933748..2934827 Beijerinckia indica subsp. indica ATCC 9039 6199255 YP_001833659.1 CDS Bind_2571 NC_010581.1 2935271 2936311 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rle:pRL110607 putative transposase family protein; transposase IS116/IS110/IS902 family protein complement(2935271..2936311) Beijerinckia indica subsp. indica ATCC 9039 6199182 YP_001833660.1 CDS Bind_2573 NC_010581.1 2937112 2938152 D PFAM: Di-haem cytochrome c peroxidase; KEGG: mlo:mlr5805 cytochrome c peroxidase; cytochrome-c peroxidase 2937112..2938152 Beijerinckia indica subsp. indica ATCC 9039 6201032 YP_001833661.1 CDS Bind_2576 NC_010581.1 2940481 2941908 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1718 major facilitator superfamily (MFS) transporter; major facilitator transporter complement(2940481..2941908) Beijerinckia indica subsp. indica ATCC 9039 6199999 YP_001833662.1 CDS Bind_2577 NC_010581.1 2942185 2943594 D KEGG: bxe:Bxe_A1720 hypothetical protein; hypothetical protein 2942185..2943594 Beijerinckia indica subsp. indica ATCC 9039 6201036 YP_001833663.1 CDS Bind_2578 NC_010581.1 2943594 2943902 D KEGG: bxe:Bxe_A1719 hypothetical protein; hypothetical protein 2943594..2943902 Beijerinckia indica subsp. indica ATCC 9039 6199538 YP_001833664.1 CDS Bind_2579 NC_010581.1 2943913 2944959 D KEGG: bxe:Bxe_A1722 predicted metal-dependent hydrolase; metal-dependent hydrolase 2943913..2944959 Beijerinckia indica subsp. indica ATCC 9039 6200311 YP_001833665.1 CDS Bind_2580 NC_010581.1 2945121 2946398 D PFAM: regulatory protein MerR; KEGG: cak:Caul_0483 DNA binding domain protein, excisionase family; regulatory protein MerR 2945121..2946398 Beijerinckia indica subsp. indica ATCC 9039 6200165 YP_001833666.1 CDS Bind_2582 NC_010581.1 2946956 2948794 R PFAM: protein of unknown function DUF1302; KEGG: cvi:CV_2103 hypothetical protein; hypothetical protein complement(2946956..2948794) Beijerinckia indica subsp. indica ATCC 9039 6200381 YP_001833667.1 CDS Bind_2583 NC_010581.1 2950080 2950319 D KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; putative insertion sequence transposase-like protein 2950080..2950319 Beijerinckia indica subsp. indica ATCC 9039 6200609 YP_001833668.1 CDS Bind_2584 NC_010581.1 2950626 2950880 D KEGG: sil:SPO1864 hypothetical protein; hypothetical protein 2950626..2950880 Beijerinckia indica subsp. indica ATCC 9039 6200928 YP_001833669.1 CDS Bind_2585 NC_010581.1 2951349 2952128 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1284 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2951349..2952128) Beijerinckia indica subsp. indica ATCC 9039 6201349 YP_001833670.1 CDS Bind_2586 NC_010581.1 2952118 2952786 R KEGG: xau:Xaut_1285 heme oxygenase family; heme oxygenase family complement(2952118..2952786) Beijerinckia indica subsp. indica ATCC 9039 6200489 YP_001833671.1 CDS Bind_2587 NC_010581.1 2952807 2954285 R PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_1286 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2952807..2954285) Beijerinckia indica subsp. indica ATCC 9039 6199494 YP_001833672.1 CDS Bind_2588 NC_010581.1 2954269 2954853 R KEGG: xau:Xaut_1287 hypothetical protein; hypothetical protein complement(2954269..2954853) Beijerinckia indica subsp. indica ATCC 9039 6200834 YP_001833673.1 CDS Bind_2589 NC_010581.1 2955800 2956513 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_4997 DNA-binding response regulator; two component transcriptional regulator 2955800..2956513 Beijerinckia indica subsp. indica ATCC 9039 6199747 YP_001833674.1 CDS Bind_2590 NC_010581.1 2956510 2957928 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_4996 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2956510..2957928 Beijerinckia indica subsp. indica ATCC 9039 6201261 YP_001833675.1 CDS Bind_2591 NC_010581.1 2958125 2958625 R hypothetical protein complement(2958125..2958625) Beijerinckia indica subsp. indica ATCC 9039 6200128 YP_001833676.1 CDS Bind_2594 NC_010581.1 2960518 2961330 D PFAM: VacJ family lipoprotein; KEGG: ppg:PputGB1_1970 VacJ family lipoprotein; VacJ family lipoprotein 2960518..2961330 Beijerinckia indica subsp. indica ATCC 9039 6201311 YP_001833677.1 CDS Bind_2595 NC_010581.1 2961528 2962031 D KEGG: mex:Mext_2011 hypothetical protein; hypothetical protein 2961528..2962031 Beijerinckia indica subsp. indica ATCC 9039 6201571 YP_001833678.1 CDS Bind_2596 NC_010581.1 2962321 2962950 D KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2962321..2962950 Beijerinckia indica subsp. indica ATCC 9039 6200416 YP_001833679.1 CDS Bind_2597 NC_010581.1 2962950 2963660 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1282 methyltransferase type 11; type 11 methyltransferase 2962950..2963660 Beijerinckia indica subsp. indica ATCC 9039 6199948 YP_001833680.1 CDS Bind_2598 NC_010581.1 2963686 2964087 D KEGG: bur:Bcep18194_A5701 hypothetical protein; hypothetical protein 2963686..2964087 Beijerinckia indica subsp. indica ATCC 9039 6200801 YP_001833681.1 CDS Bind_2599 NC_010581.1 2964349 2964861 D KEGG: psa:PST_1628 hypothetical protein; hypothetical protein 2964349..2964861 Beijerinckia indica subsp. indica ATCC 9039 6200030 YP_001833682.1 CDS Bind_2600 NC_010581.1 2965034 2965705 D KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2965034..2965705 Beijerinckia indica subsp. indica ATCC 9039 6200512 YP_001833683.1 CDS Bind_2601 NC_010581.1 2965914 2967269 D PFAM: aminotransferase class-III; KEGG: sus:Acid_1357 aminotransferase class-III; class III aminotransferase 2965914..2967269 Beijerinckia indica subsp. indica ATCC 9039 6200296 YP_001833684.1 CDS Bind_2602 NC_010581.1 2967284 2968348 D PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: aba:Acid345_3105 chalcone and stilbene synthases-like; 3-oxoacyl-ACP synthase 2967284..2968348 Beijerinckia indica subsp. indica ATCC 9039 6201271 YP_001833685.1 CDS Bind_2603 NC_010581.1 2968342 2969475 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: sus:Acid_1355 monooxygenase, FAD-binding; monooxygenase FAD-binding 2968342..2969475 Beijerinckia indica subsp. indica ATCC 9039 6199117 YP_001833686.1 CDS Bind_2604 NC_010581.1 2970093 2970856 D KEGG: bcs:BCAN_A0546 hypothetical protein; transposase join(2970093..2970419,2970419..2970856) Beijerinckia indica subsp. indica ATCC 9039 6200491 YP_001833687.1 CDS Bind_2606 NC_010581.1 2971437 2971727 R hypothetical protein complement(2971437..2971727) Beijerinckia indica subsp. indica ATCC 9039 6200890 YP_001833688.1 CDS Bind_2607 NC_010581.1 2971761 2972318 R KEGG: bte:BTH_I2760 hypothetical protein; hypothetical protein complement(2971761..2972318) Beijerinckia indica subsp. indica ATCC 9039 6200223 YP_001833689.1 CDS Bind_2609 NC_010581.1 2973740 2974681 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1769 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2973740..2974681) Beijerinckia indica subsp. indica ATCC 9039 6199688 YP_001833690.1 CDS Bind_2611 NC_010581.1 2975261 2976160 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bch:Bcen2424_4647 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2975261..2976160) Beijerinckia indica subsp. indica ATCC 9039 6200515 YP_001833691.1 CDS Bind_2612 NC_010581.1 2976331 2977284 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_C7134 aldo/keto reductase; aldo/keto reductase 2976331..2977284 Beijerinckia indica subsp. indica ATCC 9039 6200299 YP_001833692.1 CDS Bind_2613 NC_010581.1 2977795 2978685 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_A1770 putative dyhydroflavanol-4-reductase; NAD-dependent epimerase/dehydratase 2977795..2978685 Beijerinckia indica subsp. indica ATCC 9039 6200310 YP_001833693.1 CDS Bind_2614 NC_010581.1 2978731 2979717 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_A1771 putative nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2978731..2979717 Beijerinckia indica subsp. indica ATCC 9039 6198630 YP_001833694.1 CDS Bind_2615 NC_010581.1 2979824 2981623 D PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bxe:Bxe_A1772 putative esterase; X-Pro dipeptidyl-peptidase domain-containing protein 2979824..2981623 Beijerinckia indica subsp. indica ATCC 9039 6198739 YP_001833695.1 CDS Bind_2619 NC_010581.1 2984325 2985283 R KEGG: sil:SPO2406 ISSpo6, transposase orf A; transposase complement(join(2984325..2984936,2984936..2985283)) Beijerinckia indica subsp. indica ATCC 9039 6199492 YP_001833696.1 CDS Bind_2620 NC_010581.1 2985374 2986327 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A3662 putative AraC-type DNA-binding domain-containing protein; AraC family transcriptional regulator complement(2985374..2986327) Beijerinckia indica subsp. indica ATCC 9039 6200849 YP_001833697.1 CDS Bind_2622 NC_010581.1 2987646 2988842 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 2987646..2988842 Beijerinckia indica subsp. indica ATCC 9039 6199141 YP_001833698.1 CDS Bind_2623 NC_010581.1 2988899 2989627 D PFAM: ThiJ/PfpI domain protein; KEGG: vvy:VV0154 hypothetical protein; ThiJ/PfpI domain-containing protein 2988899..2989627 Beijerinckia indica subsp. indica ATCC 9039 6199457 YP_001833699.1 CDS Bind_2624 NC_010581.1 2989665 2990825 D PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_4260 luciferase family protein; alkanesulfonate monooxygenase 2989665..2990825 Beijerinckia indica subsp. indica ATCC 9039 6200392 YP_001833700.1 CDS Bind_2625 NC_010581.1 2990904 2991431 D PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein; flavin reductase domain-containing protein 2990904..2991431 Beijerinckia indica subsp. indica ATCC 9039 6199808 YP_001833701.1 CDS Bind_2626 NC_010581.1 2991681 2992535 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpt:Bpet3943 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2991681..2992535 Beijerinckia indica subsp. indica ATCC 9039 6200800 YP_001833702.1 CDS Bind_2627 NC_010581.1 2992860 2993540 D TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: rle:RL2726 putative riboflavin biosynthesis protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2992860..2993540 Beijerinckia indica subsp. indica ATCC 9039 6200634 YP_001833703.1 CDS Bind_2628 NC_010581.1 2993937 2994551 D KEGG: xau:Xaut_1352 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2993937..2994551 Beijerinckia indica subsp. indica ATCC 9039 6198689 YP_001833704.1 CDS Bind_2629 NC_010581.1 2994966 2995778 D KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein 2994966..2995778 Beijerinckia indica subsp. indica ATCC 9039 6198608 YP_001833705.1 CDS Bind_2633 NC_010581.1 2996670 2997677 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA303 alcohol dehydrogenase; alcohol dehydrogenase complement(2996670..2997677) Beijerinckia indica subsp. indica ATCC 9039 6199847 YP_001833706.1 CDS Bind_2634 NC_010581.1 2997674 2998900 R PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4134 major facilitator superfamily MFS_1; major facilitator transporter complement(2997674..2998900) Beijerinckia indica subsp. indica ATCC 9039 6199671 YP_001833707.1 CDS Bind_2635 NC_010581.1 2999002 2999895 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_3209 transcriptional regulator, LysR family; LysR family transcriptional regulator 2999002..2999895 Beijerinckia indica subsp. indica ATCC 9039 6200572 YP_001833708.1 CDS Bind_2637 NC_010581.1 3000708 3001430 R PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; KEGG: bvi:Bcep1808_6083 peptidase M10A and M12B, matrixin and adamalysin; peptidase M10A and M12B matrixin and adamalysin complement(3000708..3001430) Beijerinckia indica subsp. indica ATCC 9039 6198686 YP_001833709.1 CDS Bind_2639 NC_010581.1 3002507 3003811 R KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(3002507..3003811) Beijerinckia indica subsp. indica ATCC 9039 6200960 YP_001833710.1 CDS Bind_2640 NC_010581.1 3004057 3004848 R PFAM: regulatory protein LysR; TOBE domain protein; KEGG: azc:AZC_1791 molybdenum-binding protein; ModE family transcriptional regulator complement(3004057..3004848) Beijerinckia indica subsp. indica ATCC 9039 6199467 YP_001833711.1 CDS Bind_2641 NC_010581.1 3004890 3005138 R hypothetical protein complement(3004890..3005138) Beijerinckia indica subsp. indica ATCC 9039 6200737 YP_001833712.1 CDS Bind_2642 NC_010581.1 3005143 3006555 R KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(3005143..3006555) Beijerinckia indica subsp. indica ATCC 9039 6200360 YP_001833713.1 CDS Bind_2643 NC_010581.1 3007211 3009523 R PFAM: glycoside hydrolase family 10; glycosyl transferase group 1; KEGG: syf:Synpcc7942_1400 endo-1,4-beta-xylanase; endo-1,4-beta-xylanase complement(3007211..3009523) Beijerinckia indica subsp. indica ATCC 9039 6200759 YP_001833714.1 CDS Bind_2644 NC_010581.1 3009716 3011935 R KEGG: bja:bll2362 succinoglycan biosynthesis transport protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase complement(3009716..3011935) Beijerinckia indica subsp. indica ATCC 9039 6200707 YP_001833715.1 CDS Bind_2645 NC_010581.1 3012005 3013201 R PFAM: glycosyl transferase group 1; KEGG: gvi:gll2195 probable glycosyl transferase; group 1 glycosyl transferase complement(3012005..3013201) Beijerinckia indica subsp. indica ATCC 9039 6200414 YP_001833716.1 CDS Bind_2647 NC_010581.1 3014741 3015559 D KEGG: mgm:Mmc1_1231 hypothetical protein; hypothetical protein 3014741..3015559 Beijerinckia indica subsp. indica ATCC 9039 6200813 YP_001833717.1 CDS Bind_2648 NC_010581.1 3015709 3016521 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: jan:Jann_4258 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 3015709..3016521 Beijerinckia indica subsp. indica ATCC 9039 6199400 YP_001833718.1 CDS Bind_2650 NC_010581.1 3017357 3018397 D PFAM: glycosyl transferase group 1; KEGG: cak:Caul_2119 glycosyl transferase group 1; group 1 glycosyl transferase 3017357..3018397 Beijerinckia indica subsp. indica ATCC 9039 6199642 YP_001833719.1 CDS Bind_2651 NC_010581.1 3018450 3019541 D PFAM: acyltransferase 3; KEGG: mmr:Mmar10_0197 acyltransferase 3; acyltransferase 3 3018450..3019541 Beijerinckia indica subsp. indica ATCC 9039 6200573 YP_001833720.1 CDS Bind_2653 NC_010581.1 3020464 3021906 R PFAM: polysaccharide biosynthesis protein; KEGG: noc:Noc_2481 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3020464..3021906) Beijerinckia indica subsp. indica ATCC 9039 6199880 YP_001833721.1 CDS Bind_2655 NC_010581.1 3023096 3024181 D PFAM: acyltransferase 3; KEGG: psa:PST_2375 predicted membrane protein; acyltransferase 3 3023096..3024181 Beijerinckia indica subsp. indica ATCC 9039 6199599 YP_001833722.1 CDS Bind_2656 NC_010581.1 3024202 3025200 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_2378 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(3024202..3025200) Beijerinckia indica subsp. indica ATCC 9039 6200685 YP_001833723.1 CDS Bind_2657 NC_010581.1 3025753 3027153 D KEGG: mlo:mll2088 hypothetical protein; hypothetical protein 3025753..3027153 Beijerinckia indica subsp. indica ATCC 9039 6199775 YP_001833724.1 CDS Bind_2658 NC_010581.1 3027340 3027906 D KEGG: rpa:RPA3354 hypothetical protein; hypothetical protein 3027340..3027906 Beijerinckia indica subsp. indica ATCC 9039 6199237 YP_001833725.1 CDS Bind_2661 NC_010581.1 3029950 3030240 R hypothetical protein complement(3029950..3030240) Beijerinckia indica subsp. indica ATCC 9039 6199485 YP_001833726.1 CDS Bind_2665 NC_010581.1 3033408 3034631 R PFAM: integrase family protein; KEGG: oan:Oant_0882 phage integrase family protein; integrase family protein complement(3033408..3034631) Beijerinckia indica subsp. indica ATCC 9039 6199252 YP_001833727.1 CDS Bind_2666 NC_010581.1 3034737 3034925 D PFAM: YcfA family protein; KEGG: nha:Nham_0566 YcfA-like; hypothetical protein 3034737..3034925 Beijerinckia indica subsp. indica ATCC 9039 6200384 YP_001833728.1 CDS Bind_2667 NC_010581.1 3034930 3035328 D PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: nha:Nham_0567 protein of unknown function UPF0150; hypothetical protein 3034930..3035328 Beijerinckia indica subsp. indica ATCC 9039 6201153 YP_001833729.1 CDS Bind_2668 NC_010581.1 3035546 3036076 D hypothetical protein 3035546..3036076 Beijerinckia indica subsp. indica ATCC 9039 6201240 YP_001833730.1 CDS Bind_2669 NC_010581.1 3036080 3036325 D hypothetical protein 3036080..3036325 Beijerinckia indica subsp. indica ATCC 9039 6200026 YP_001833731.1 CDS Bind_2670 NC_010581.1 3036529 3037212 D hypothetical protein 3036529..3037212 Beijerinckia indica subsp. indica ATCC 9039 6198801 YP_001833732.1 CDS Bind_2671 NC_010581.1 3037301 3038359 D KEGG: nar:Saro_2712 hypothetical protein; hypothetical protein 3037301..3038359 Beijerinckia indica subsp. indica ATCC 9039 6199764 YP_001833733.1 CDS Bind_2672 NC_010581.1 3039000 3041444 D PFAM: N-6 DNA methylase; KEGG: dno:DNO_0223 type I restriction-modification system, M subunit; N-6 DNA methylase 3039000..3041444 Beijerinckia indica subsp. indica ATCC 9039 6198658 YP_001833734.1 CDS Bind_2673 NC_010581.1 3041441 3042688 D PFAM: restriction modification system DNA specificity domain; KEGG: saq:Sare_2852 restriction endonuclease S subunits-like protein; restriction modification system DNA specificity subunit 3041441..3042688 Beijerinckia indica subsp. indica ATCC 9039 6198858 YP_001833735.1 CDS Bind_2674 NC_010581.1 3042685 3045768 D KEGG: sbm:Shew185_2197 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 3042685..3045768 Beijerinckia indica subsp. indica ATCC 9039 6200265 YP_001833736.1 CDS Bind_2675 NC_010581.1 3045758 3046489 D PFAM: protein of unknown function DUF45; KEGG: mma:MM_2291 zinc metalloprotease; hypothetical protein 3045758..3046489 Beijerinckia indica subsp. indica ATCC 9039 6200040 YP_001833737.1 CDS Bind_2676 NC_010581.1 3046526 3048994 R KEGG: ret:RHE_PD00007 hypothetical protein; hypothetical protein complement(3046526..3048994) Beijerinckia indica subsp. indica ATCC 9039 6199916 YP_001833738.1 CDS Bind_2677 NC_010581.1 3049010 3049996 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PD00006 probable ATPase (ATP-binding) protein; ATPase central domain-containing protein complement(3049010..3049996) Beijerinckia indica subsp. indica ATCC 9039 6200900 YP_001833739.1 CDS Bind_2678 NC_010581.1 3050350 3050616 D hypothetical protein 3050350..3050616 Beijerinckia indica subsp. indica ATCC 9039 6199795 YP_001833740.1 CDS Bind_2679 NC_010581.1 3051772 3054345 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3051772..3054345 Beijerinckia indica subsp. indica ATCC 9039 6200338 YP_001833741.1 CDS Bind_2680 NC_010581.1 3054356 3054907 R PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 protein of unknown function DUF1234; hypothetical protein complement(3054356..3054907) Beijerinckia indica subsp. indica ATCC 9039 6200432 YP_001833742.1 CDS Bind_2681 NC_010581.1 3054917 3055561 R KEGG: lbl:LBL_1518 hypothetical protein; hypothetical protein complement(3054917..3055561) Beijerinckia indica subsp. indica ATCC 9039 6201111 YP_001833743.1 CDS Bind_2682 NC_010581.1 3055619 3056926 R TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase; adenylosuccinate lyase complement(3055619..3056926) Beijerinckia indica subsp. indica ATCC 9039 6198503 YP_001833744.1 CDS Bind_2683 NC_010581.1 3057114 3058142 R PFAM: peptidase S58 DmpA; KEGG: rpa:RPA3813 peptidase family T4; peptidase S58 DmpA complement(3057114..3058142) Beijerinckia indica subsp. indica ATCC 9039 6201359 YP_001833745.1 CDS Bind_2684 NC_010581.1 3058305 3058838 R PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein; lytic transglycosylase complement(3058305..3058838) Beijerinckia indica subsp. indica ATCC 9039 6199840 YP_001833746.1 CDS Bind_2685 NC_010581.1 3058822 3060531 R KEGG: dpo:Dpse_GA17283 GA17283-PA; hypothetical protein complement(3058822..3060531) Beijerinckia indica subsp. indica ATCC 9039 6198447 YP_001833747.1 CDS Bind_2686 NC_010581.1 3060528 3061790 R KEGG: mex:Mext_0632 putative chemotaxis protein precursor; putative chemotaxis protein complement(3060528..3061790) Beijerinckia indica subsp. indica ATCC 9039 6199809 YP_001833748.1 CDS Bind_2687 NC_010581.1 3061787 3063037 R PFAM: OmpA/MotB domain protein; KEGG: bja:bll6862 flagellar motor protein MotB; OmpA/MotB domain-containing protein complement(3061787..3063037) Beijerinckia indica subsp. indica ATCC 9039 6200277 YP_001833749.1 CDS Bind_2688 NC_010581.1 3063040 3063672 R KEGG: bja:bll6863 hypothetical protein; hypothetical protein complement(3063040..3063672) Beijerinckia indica subsp. indica ATCC 9039 6200167 YP_001833750.1 CDS fliF NC_010581.1 3063669 3065312 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(3063669..3065312) Beijerinckia indica subsp. indica ATCC 9039 6200788 YP_001833751.1 CDS Bind_2690 NC_010581.1 3065474 3066460 R PFAM: flagellin domain protein; KEGG: ret:RHE_CH00669 flagellin C protein; flagellin domain-containing protein complement(3065474..3066460) Beijerinckia indica subsp. indica ATCC 9039 6200940 YP_001833752.1 CDS Bind_2691 NC_010581.1 3067036 3068271 D PFAM: Rhodanese domain protein; KEGG: bja:bll7966 putative thiosulfate sulfurtransferase; rhodanese domain-containing protein 3067036..3068271 Beijerinckia indica subsp. indica ATCC 9039 6200082 YP_001833753.1 CDS Bind_2692 NC_010581.1 3068345 3069433 D PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_2509 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3068345..3069433 Beijerinckia indica subsp. indica ATCC 9039 6198777 YP_001833754.1 CDS Bind_2693 NC_010581.1 3069487 3070266 D PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO4286 hypothetical protein; hypothetical protein 3069487..3070266 Beijerinckia indica subsp. indica ATCC 9039 6198466 YP_001833755.1 CDS Bind_2694 NC_010581.1 3071086 3073377 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Patatin; KEGG: xau:Xaut_4913 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3071086..3073377 Beijerinckia indica subsp. indica ATCC 9039 6199019 YP_001833756.1 CDS Bind_2695 NC_010581.1 3073728 3074468 D converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 3073728..3074468 Beijerinckia indica subsp. indica ATCC 9039 6199817 YP_001833757.1 CDS Bind_2696 NC_010581.1 3074515 3075297 D TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1887 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 3074515..3075297 Beijerinckia indica subsp. indica ATCC 9039 6200062 YP_001833758.1 CDS Bind_2697 NC_010581.1 3075389 3076216 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase complement(3075389..3076216) Beijerinckia indica subsp. indica ATCC 9039 6199350 YP_001833759.1 CDS Bind_2698 NC_010581.1 3076282 3076704 R KEGG: rpc:RPC_1349 hypothetical protein; hypothetical protein complement(3076282..3076704) Beijerinckia indica subsp. indica ATCC 9039 6198843 YP_001833760.1 CDS Bind_2699 NC_010581.1 3076910 3078412 R PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: mex:Mext_4231 peptidase M23B; peptidase M23 complement(3076910..3078412) Beijerinckia indica subsp. indica ATCC 9039 6200063 YP_001833761.1 CDS Bind_2700 NC_010581.1 3078652 3079344 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: rpe:RPE_2705 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(3078652..3079344) Beijerinckia indica subsp. indica ATCC 9039 6199522 YP_001833762.1 CDS Bind_2701 NC_010581.1 3079351 3080142 R KEGG: mex:Mext_4233 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE complement(3079351..3080142) Beijerinckia indica subsp. indica ATCC 9039 6198773 YP_001833763.1 CDS Bind_2702 NC_010581.1 3080170 3081480 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(3080170..3081480) Beijerinckia indica subsp. indica ATCC 9039 6198532 YP_001833764.1 CDS Bind_2703 NC_010581.1 3081553 3082344 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bja:bll4749 sec-independent protein translocase protein; Sec-independent protein translocase subunit TatC complement(3081553..3082344) Beijerinckia indica subsp. indica ATCC 9039 6198405 YP_001833765.1 CDS Bind_2704 NC_010581.1 3082463 3082903 R TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: xau:Xaut_4406 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB complement(3082463..3082903) Beijerinckia indica subsp. indica ATCC 9039 6198548 YP_001833766.1 CDS tatA NC_010581.1 3083040 3083285 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3083040..3083285) Beijerinckia indica subsp. indica ATCC 9039 6198547 YP_001833767.1 CDS Bind_2706 NC_010581.1 3083663 3083902 D TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: xau:Xaut_4303 putative regulatory protein, FmdB family; FmdB family regulatory protein 3083663..3083902 Beijerinckia indica subsp. indica ATCC 9039 6200186 YP_001833768.1 CDS Bind_2707 NC_010581.1 3083946 3084704 R TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rpd:RPD_2791 chromosome segregation and condensation protein ScpB; segregation and condensation protein B complement(3083946..3084704) Beijerinckia indica subsp. indica ATCC 9039 6200682 YP_001833769.1 CDS Bind_2708 NC_010581.1 3084761 3085603 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: rpe:RPE_2694 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(3084761..3085603) Beijerinckia indica subsp. indica ATCC 9039 6198965 YP_001833770.1 CDS Bind_2709 NC_010581.1 3085783 3087318 R PFAM: Sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain protein; sporulation domain-containing protein complement(3085783..3087318) Beijerinckia indica subsp. indica ATCC 9039 6198946 YP_001833771.1 CDS Bind_2710 NC_010581.1 3087773 3089545 R KEGG: nha:Nham_1758 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(3087773..3089545) Beijerinckia indica subsp. indica ATCC 9039 6198923 YP_001833772.1 CDS Bind_2711 NC_010581.1 3089714 3090934 R KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase complement(3089714..3090934) Beijerinckia indica subsp. indica ATCC 9039 6198578 YP_001833773.1 CDS Bind_2712 NC_010581.1 3091126 3091482 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_2808 HesB protein; iron-sulfur cluster assembly accessory protein 3091126..3091482 Beijerinckia indica subsp. indica ATCC 9039 6199379 YP_001833774.1 CDS Bind_2713 NC_010581.1 3091895 3093715 D KEGG: mex:Mext_3391 hypothetical protein; hypothetical protein 3091895..3093715 Beijerinckia indica subsp. indica ATCC 9039 6199793 YP_001833775.1 CDS Bind_2714 NC_010581.1 3093828 3094061 D hypothetical protein 3093828..3094061 Beijerinckia indica subsp. indica ATCC 9039 6200396 YP_001833776.1 CDS Bind_2715 NC_010581.1 3094365 3094601 R hypothetical protein complement(3094365..3094601) Beijerinckia indica subsp. indica ATCC 9039 6198820 YP_001833777.1 CDS Bind_2716 NC_010581.1 3094832 3095128 R hypothetical protein complement(3094832..3095128) Beijerinckia indica subsp. indica ATCC 9039 6200302 YP_001833778.1 CDS Bind_2717 NC_010581.1 3095350 3097203 R KEGG: bra:BRADO2754 dihydroxyacid dehydratase (DAD); TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(3095350..3097203) Beijerinckia indica subsp. indica ATCC 9039 6199305 YP_001833779.1 CDS Bind_2718 NC_010581.1 3097496 3098149 D KEGG: mex:Mext_1120 hypothetical protein; hypothetical protein 3097496..3098149 Beijerinckia indica subsp. indica ATCC 9039 6199437 YP_001833780.1 CDS Bind_2719 NC_010581.1 3098154 3098600 R KEGG: ret:RHE_CH01335 hypothetical protein; hypothetical protein complement(3098154..3098600) Beijerinckia indica subsp. indica ATCC 9039 6198448 YP_001833781.1 CDS Bind_2720 NC_010581.1 3098731 3100026 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3098731..3100026) Beijerinckia indica subsp. indica ATCC 9039 6198750 YP_001833782.1 CDS Bind_2721 NC_010581.1 3100869 3102341 R KEGG: amr:AM1_E0108 hypothetical protein; hypothetical protein complement(3100869..3102341) Beijerinckia indica subsp. indica ATCC 9039 6199701 YP_001833783.1 CDS Bind_2722 NC_010581.1 3103152 3103568 D hypothetical protein 3103152..3103568 Beijerinckia indica subsp. indica ATCC 9039 6200965 YP_001833784.1 CDS Bind_2723 NC_010581.1 3103575 3104153 R KEGG: xau:Xaut_3172 hypothetical protein; hypothetical protein complement(3103575..3104153) Beijerinckia indica subsp. indica ATCC 9039 6199683 YP_001833785.1 CDS Bind_2724 NC_010581.1 3104198 3106309 R KEGG: ngo:NGO0510 hypothetical protein, putative phage associated protein; putative phage associated protein complement(3104198..3106309) Beijerinckia indica subsp. indica ATCC 9039 6199801 YP_001833786.1 CDS Bind_2725 NC_010581.1 3106306 3106770 R KEGG: ngo:NGO0508 hypothetical protein, putative phage associated protein; putative phage associated protein complement(3106306..3106770) Beijerinckia indica subsp. indica ATCC 9039 6201269 YP_001833787.1 CDS Bind_2726 NC_010581.1 3106779 3107645 R PFAM: conserved hypothetical protein; KEGG: ngo:NGO0507 hypothetical protein, putative phage associated protein; hypothetical protein complement(3106779..3107645) Beijerinckia indica subsp. indica ATCC 9039 6201181 YP_001833788.1 CDS Bind_2727 NC_010581.1 3107642 3108250 R KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein; putative phage associated protein complement(3107642..3108250) Beijerinckia indica subsp. indica ATCC 9039 6200516 YP_001833789.1 CDS Bind_2728 NC_010581.1 3108285 3110543 R KEGG: rsq:Rsph17025_3714 hypothetical protein; hypothetical protein complement(3108285..3110543) Beijerinckia indica subsp. indica ATCC 9039 6201076 YP_001833790.1 CDS Bind_2729 NC_010581.1 3111051 3111335 R KEGG: xau:Xaut_0128 hypothetical protein; hypothetical protein complement(3111051..3111335) Beijerinckia indica subsp. indica ATCC 9039 6201865 YP_001833791.1 CDS Bind_2730 NC_010581.1 3111597 3112928 D PFAM: protein of unknown function DUF763; KEGG: bpt:Bpet1643 hypothetical protein; hypothetical protein 3111597..3112928 Beijerinckia indica subsp. indica ATCC 9039 6199058 YP_001833792.1 CDS Bind_2731 NC_010581.1 3113140 3113397 D PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 protein of unknown function DUF343; hypothetical protein 3113140..3113397 Beijerinckia indica subsp. indica ATCC 9039 6199151 YP_001833793.1 CDS Bind_2732 NC_010581.1 3113517 3114362 D PFAM: acyl-CoA thioesterase; KEGG: nwi:Nwi_0078 acyl-CoA thioesterase; palmitoyl-CoA hydrolase 3113517..3114362 Beijerinckia indica subsp. indica ATCC 9039 6201085 YP_001833794.1 CDS Bind_2733 NC_010581.1 3114929 3115267 D PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr0612 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 3114929..3115267 Beijerinckia indica subsp. indica ATCC 9039 6200752 YP_001833795.1 CDS Bind_2734 NC_010581.1 3115439 3116968 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter; ammonium transporter 3115439..3116968 Beijerinckia indica subsp. indica ATCC 9039 6200510 YP_001833796.1 CDS Bind_2735 NC_010581.1 3117124 3118767 D PFAM: phosphoglucose isomerase (PGI); KEGG: smd:Smed_0109 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 3117124..3118767 Beijerinckia indica subsp. indica ATCC 9039 6201335 YP_001833797.1 CDS Bind_2736 NC_010581.1 3118865 3119674 R KEGG: nha:Nham_2267 tetratricopeptide TPR_2; hypothetical protein complement(3118865..3119674) Beijerinckia indica subsp. indica ATCC 9039 6201777 YP_001833798.1 CDS Bind_2737 NC_010581.1 3119835 3120209 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mex:Mext_1234 phosphocarrier, HPr family; phosphotransferase system, phosphocarrier protein HPr complement(3119835..3120209) Beijerinckia indica subsp. indica ATCC 9039 6199212 YP_001833799.1 CDS Bind_2738 NC_010581.1 3120210 3120611 R PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(3120210..3120611) Beijerinckia indica subsp. indica ATCC 9039 6199650 YP_001833800.1 CDS Bind_2739 NC_010581.1 3120986 3121444 R KEGG: mex:Mext_1236 HPr kinase; HPr kinase complement(3120986..3121444) Beijerinckia indica subsp. indica ATCC 9039 6201572 YP_001833801.1 CDS Bind_2740 NC_010581.1 3121467 3123350 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: azc:AZC_4066 histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3121467..3123350) Beijerinckia indica subsp. indica ATCC 9039 6200238 YP_001833802.1 CDS Bind_2741 NC_010581.1 3123483 3124178 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA0358 two-component transcriptional regulator ChvI, winged helix family; two component transcriptional regulator complement(3123483..3124178) Beijerinckia indica subsp. indica ATCC 9039 6199504 YP_001833803.1 CDS Bind_2742 NC_010581.1 3124997 3125779 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3124997..3125779 Beijerinckia indica subsp. indica ATCC 9039 6201429 YP_001833804.1 CDS Bind_2743 NC_010581.1 3125787 3127139 R PFAM: Citrate transporter; KEGG: mlo:mlr4884 hypothetical protein; citrate transporter complement(3125787..3127139) Beijerinckia indica subsp. indica ATCC 9039 6198756 YP_001833805.1 CDS Bind_2744 NC_010581.1 3127207 3130338 R KEGG: azc:AZC_4464 DNA polymerase A; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I complement(3127207..3130338) Beijerinckia indica subsp. indica ATCC 9039 6200686 YP_001833806.1 CDS Bind_2745 NC_010581.1 3130497 3130835 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_1795 hypothetical protein; antibiotic biosynthesis monooxygenase complement(3130497..3130835) Beijerinckia indica subsp. indica ATCC 9039 6200406 YP_001833807.1 CDS Bind_2746 NC_010581.1 3130943 3131722 R PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc01850 hypothetical protein; lytic transglycosylase complement(3130943..3131722) Beijerinckia indica subsp. indica ATCC 9039 6200192 YP_001833808.1 CDS Bind_2747 NC_010581.1 3131933 3132712 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: atc:AGR_C_4790 succinate dehydrogenase iron-sulfur protein subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(3131933..3132712) Beijerinckia indica subsp. indica ATCC 9039 6200532 YP_001833809.1 CDS Bind_2748 NC_010581.1 3132926 3133378 R KEGG: rpe:RPE_0513 hypothetical protein; hypothetical protein complement(3132926..3133378) Beijerinckia indica subsp. indica ATCC 9039 6199930 YP_001833810.1 CDS sdhA NC_010581.1 3133547 3135385 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(3133547..3135385) Beijerinckia indica subsp. indica ATCC 9039 6200394 YP_001833811.1 CDS Bind_2750 NC_010581.1 3135434 3135826 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bme:BMEI0160 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3135434..3135826) Beijerinckia indica subsp. indica ATCC 9039 6201013 YP_001833812.1 CDS Bind_2751 NC_010581.1 3135991 3136404 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: nwi:Nwi_2798 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3135991..3136404) Beijerinckia indica subsp. indica ATCC 9039 6201014 YP_001833813.1 CDS Bind_2752 NC_010581.1 3136931 3137860 D PFAM: phospholipase/Carboxylesterase; KEGG: bbt:BBta_3217 hypothetical protein; phospholipase/carboxylesterase 3136931..3137860 Beijerinckia indica subsp. indica ATCC 9039 6199565 YP_001833814.1 CDS Bind_2753 NC_010581.1 3137927 3139228 R KEGG: dar:Daro_2929 hypothetical protein; hypothetical protein complement(3137927..3139228) Beijerinckia indica subsp. indica ATCC 9039 6199566 YP_001833815.1 CDS Bind_2754 NC_010581.1 3139455 3139751 R KEGG: nha:Nham_0883 hypothetical protein; hypothetical protein complement(3139455..3139751) Beijerinckia indica subsp. indica ATCC 9039 6198900 YP_001833816.1 CDS Bind_2755 NC_010581.1 3139748 3140557 R KEGG: nha:Nham_0882 hypothetical protein; hypothetical protein complement(3139748..3140557) Beijerinckia indica subsp. indica ATCC 9039 6198901 YP_001833817.1 CDS Bind_2756 NC_010581.1 3141578 3143971 D PFAM: Domain of unknown function DUF1929; KEGG: bps:BPSL1707 putative exported oxidase; galactose oxidase 3141578..3143971 Beijerinckia indica subsp. indica ATCC 9039 6201385 YP_001833818.1 CDS Bind_2757 NC_010581.1 3144261 3145463 D PFAM: glycosyl transferase group 1; KEGG: rde:RD1_3845 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 3144261..3145463 Beijerinckia indica subsp. indica ATCC 9039 6201386 YP_001833819.1 CDS Bind_2758 NC_010581.1 3145450 3146496 D KEGG: sil:SPO0036 hypothetical protein; hypothetical protein 3145450..3146496 Beijerinckia indica subsp. indica ATCC 9039 6201387 YP_001833820.1 CDS Bind_2759 NC_010581.1 3146493 3147806 D PFAM: glycoside hydrolase family 5; KEGG: amr:AM1_1890 hypothetical protein; glycoside hydrolase family protein 3146493..3147806 Beijerinckia indica subsp. indica ATCC 9039 6201741 YP_001833821.1 CDS Bind_2760 NC_010581.1 3147803 3149266 D KEGG: cno:NT01CX_1531 hypothetical protein; hypothetical protein 3147803..3149266 Beijerinckia indica subsp. indica ATCC 9039 6201742 YP_001833822.1 CDS Bind_2761 NC_010581.1 3149396 3149980 D KEGG: bja:bll2363 hypothetical protein; hypothetical protein 3149396..3149980 Beijerinckia indica subsp. indica ATCC 9039 6201743 YP_001833823.1 CDS Bind_2762 NC_010581.1 3150045 3152291 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:bll2362 succinoglycan biosynthesis transport protein; lipopolysaccharide biosynthesis protein 3150045..3152291 Beijerinckia indica subsp. indica ATCC 9039 6201584 YP_001833824.1 CDS Bind_2763 NC_010581.1 3152380 3153354 D KEGG: rsp:RSP_2396 hypothetical protein; hypothetical protein 3152380..3153354 Beijerinckia indica subsp. indica ATCC 9039 6201585 YP_001833825.1 CDS Bind_2764 NC_010581.1 3153544 3154797 D KEGG: xau:Xaut_3565 polysaccharide biosynthesis protein; hypothetical protein 3153544..3154797 Beijerinckia indica subsp. indica ATCC 9039 6201586 YP_001833826.1 CDS Bind_2765 NC_010581.1 3155378 3156559 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmt:BSUIS_A0575 oxidoreductase domain protein; oxidoreductase domain-containing protein 3155378..3156559 Beijerinckia indica subsp. indica ATCC 9039 6199429 YP_001833827.1 CDS Bind_2766 NC_010581.1 3156640 3157650 R PFAM: regulatory protein LacI; KEGG: rle:pRL110623 putative transcriptional regulator; LacI family transcriptional regulator complement(3156640..3157650) Beijerinckia indica subsp. indica ATCC 9039 6199430 YP_001833828.1 CDS Bind_2767 NC_010581.1 3157962 3159053 D PFAM: fatty acid desaturase; KEGG: mlo:mlr4998 putative hydrocarbon oxygenase MocD; fatty acid desaturase 3157962..3159053 Beijerinckia indica subsp. indica ATCC 9039 6199431 YP_001833829.1 CDS Bind_2768 NC_010581.1 3159146 3159475 D TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: smd:Smed_5006 Rieske (2Fe-2S) domain protein, MocE subfamily; Rieske (2Fe-2S) domain-containing protein 3159146..3159475 Beijerinckia indica subsp. indica ATCC 9039 6198595 YP_001833830.1 CDS Bind_2769 NC_010581.1 3159623 3160612 D PFAM: aldo/keto reductase; KEGG: sus:Acid_5923 aldo/keto reductase; aldo/keto reductase 3159623..3160612 Beijerinckia indica subsp. indica ATCC 9039 6198596 YP_001833831.1 CDS Bind_2770 NC_010581.1 3160615 3161436 D KEGG: lmo:lmo1968 hypothetical protein; hypothetical protein 3160615..3161436 Beijerinckia indica subsp. indica ATCC 9039 6198597 YP_001833832.1 CDS Bind_2771 NC_010581.1 3161532 3162476 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_2900 putative rhizopine-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 3161532..3162476 Beijerinckia indica subsp. indica ATCC 9039 6200691 YP_001833833.1 CDS Bind_2772 NC_010581.1 3162674 3163588 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:RL1417 putative IolH myo-inositol catabolism protein; xylose isomerase domain-containing protein 3162674..3163588 Beijerinckia indica subsp. indica ATCC 9039 6200692 YP_001833834.1 CDS Bind_2773 NC_010581.1 3164011 3165462 D produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3164011..3165462 Beijerinckia indica subsp. indica ATCC 9039 6200693 YP_001833835.1 CDS Bind_2774 NC_010581.1 3165459 3165920 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 3165459..3165920 Beijerinckia indica subsp. indica ATCC 9039 6201641 YP_001833836.1 CDS Bind_2775 NC_010581.1 3165953 3166207 D KEGG: bxe:Bxe_A1881 putative H(+)-transporting ATP synthase, gene 1 protein; putative H(+)-transporting ATP synthase, gene 1 protein 3165953..3166207 Beijerinckia indica subsp. indica ATCC 9039 6201642 YP_001833837.1 CDS Bind_2776 NC_010581.1 3166281 3166973 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3166281..3166973 Beijerinckia indica subsp. indica ATCC 9039 6201643 YP_001833838.1 CDS Bind_2777 NC_010581.1 3166970 3167230 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3166970..3167230 Beijerinckia indica subsp. indica ATCC 9039 6201749 YP_001833839.1 CDS Bind_2778 NC_010581.1 3167244 3168023 D PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bxe:Bxe_C0044 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 3167244..3168023 Beijerinckia indica subsp. indica ATCC 9039 6201750 YP_001833840.1 CDS Bind_2779 NC_010581.1 3168020 3169534 D produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3168020..3169534 Beijerinckia indica subsp. indica ATCC 9039 6201751 YP_001833841.1 CDS Bind_2780 NC_010581.1 3169531 3170406 D PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: bxe:Bxe_C0042 H+-transporting two-sector ATPase, gamma subunit; H+transporting two-sector ATPase subunit gamma 3169531..3170406 Beijerinckia indica subsp. indica ATCC 9039 6201425 YP_001833842.1 CDS Bind_2783 NC_010581.1 3171866 3172615 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smd:Smed_5828 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3171866..3172615) Beijerinckia indica subsp. indica ATCC 9039 6201663 YP_001833843.1 CDS Bind_2784 NC_010581.1 3172710 3173606 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_5829 transcriptional regulator, LysR family; LysR family transcriptional regulator 3172710..3173606 Beijerinckia indica subsp. indica ATCC 9039 6201664 YP_001833844.1 CDS Bind_2785 NC_010581.1 3173674 3174609 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3225 putative LysR family transcriptional regulator; LysR family transcriptional regulator complement(3173674..3174609) Beijerinckia indica subsp. indica ATCC 9039 6201665 YP_001833845.1 CDS Bind_2786 NC_010581.1 3174738 3175217 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rle:RL3226 hypothetical protein; alkylhydroperoxidase 3174738..3175217 Beijerinckia indica subsp. indica ATCC 9039 6201610 YP_001833846.1 CDS Bind_2787 NC_010581.1 3175349 3176266 D PFAM: beta-lactamase domain protein; KEGG: atc:AGR_L_1113 hypothetical protein; beta-lactamase domain-containing protein 3175349..3176266 Beijerinckia indica subsp. indica ATCC 9039 6201611 YP_001833847.1 CDS Bind_2789 NC_010581.1 3176531 3176956 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20864 hypothetical protein; cupin 3176531..3176956 Beijerinckia indica subsp. indica ATCC 9039 6201721 YP_001833848.1 CDS Bind_2790 NC_010581.1 3177034 3178041 D PFAM: MscS Mechanosensitive ion channel; KEGG: smd:Smed_5823 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 3177034..3178041 Beijerinckia indica subsp. indica ATCC 9039 6201722 YP_001833849.1 CDS Bind_2791 NC_010581.1 3177992 3178480 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bpt:Bpet3860 probable RF2 family protein; BadM/Rrf2 family transcriptional regulator complement(3177992..3178480) Beijerinckia indica subsp. indica ATCC 9039 6201723 YP_001833850.1 CDS Bind_2792 NC_010581.1 3179216 3180139 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: xau:Xaut_1982 thioredoxin; thioredoxin 3179216..3180139 Beijerinckia indica subsp. indica ATCC 9039 6201457 YP_001833851.1 CDS Bind_2793 NC_010581.1 3180423 3181091 D PFAM: peptidase S16 lon domain protein; KEGG: mex:Mext_2252 peptidase S16 lon domain protein; peptidase S16 lon domain-containing protein 3180423..3181091 Beijerinckia indica subsp. indica ATCC 9039 6199736 YP_001833852.1 CDS Bind_2794 NC_010581.1 3181192 3181716 R hypothetical protein complement(3181192..3181716) Beijerinckia indica subsp. indica ATCC 9039 6199737 YP_001833853.1 CDS Bind_2795 NC_010581.1 3182040 3182462 R PFAM: PilT protein domain protein; KEGG: rpc:RPC_4151 PilT protein-like; PilT domain-containing protein complement(3182040..3182462) Beijerinckia indica subsp. indica ATCC 9039 6199738 YP_001833854.1 CDS Bind_2796 NC_010581.1 3182459 3182743 R KEGG: bxe:Bxe_B1881 plasmid stability protein; plasmid stability protein complement(3182459..3182743) Beijerinckia indica subsp. indica ATCC 9039 6200133 YP_001833855.1 CDS Bind_2797 NC_010581.1 3183149 3183721 D hypothetical protein 3183149..3183721 Beijerinckia indica subsp. indica ATCC 9039 6200134 YP_001833856.1 CDS Bind_2798 NC_010581.1 3183714 3186281 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bra:BRADO4942 hypothetical protein; putative CbxX/CfqX family protein (N-term) and peptidase (C-term); ATPase central domain-containing protein 3183714..3186281 Beijerinckia indica subsp. indica ATCC 9039 6200135 YP_001833857.1 CDS Bind_2799 NC_010581.1 3186369 3187169 D hypothetical protein 3186369..3187169 Beijerinckia indica subsp. indica ATCC 9039 6201638 YP_001833858.1 CDS Bind_2800 NC_010581.1 3187333 3188097 D KEGG: nha:Nham_3767 hypothetical protein; hypothetical protein 3187333..3188097 Beijerinckia indica subsp. indica ATCC 9039 6201639 YP_001833859.1 CDS Bind_2801 NC_010581.1 3188189 3189547 D KEGG: acr:Acry_3293 nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein; DNA repair nucleotidyltransferase/DNA polymerase-like protein 3188189..3189547 Beijerinckia indica subsp. indica ATCC 9039 6201640 YP_001833860.1 CDS Bind_2802 NC_010581.1 3189544 3192816 D KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3189544..3192816 Beijerinckia indica subsp. indica ATCC 9039 6200419 YP_001833861.1 CDS Bind_2803 NC_010581.1 3192840 3193283 D PFAM: Protein of unknown function DUF1810; KEGG: rru:Rru_A3158 hypothetical protein; hypothetical protein 3192840..3193283 Beijerinckia indica subsp. indica ATCC 9039 6200420 YP_001833862.1 CDS Bind_2804 NC_010581.1 3193433 3194323 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: oan:Oant_4217 chemotaxis MotA protein; MotA/TolQ/ExbB proton channel 3193433..3194323 Beijerinckia indica subsp. indica ATCC 9039 6200421 YP_001833863.1 CDS Bind_2805 NC_010581.1 3194328 3195269 D PFAM: flagellar motor switch protein FliM; KEGG: azc:AZC_0643 flagellar motor switch protein; flagellar motor switch protein FliM 3194328..3195269 Beijerinckia indica subsp. indica ATCC 9039 6199936 YP_001833864.1 CDS Bind_2806 NC_010581.1 3195360 3195689 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bja:bll6879 probable flagellar motor switch protein; flagellar motor switch protein FliN 3195360..3195689 Beijerinckia indica subsp. indica ATCC 9039 6199937 YP_001833865.1 CDS Bind_2807 NC_010581.1 3195692 3196726 D PFAM: flagellar motor switch protein FliG; KEGG: azc:AZC_0640 flagellar motor switch protein; flagellar motor switch protein FliG 3195692..3196726 Beijerinckia indica subsp. indica ATCC 9039 6199938 YP_001833866.1 CDS flhB NC_010581.1 3196964 3198046 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3196964..3198046 Beijerinckia indica subsp. indica ATCC 9039 6199652 YP_001833867.1 CDS Bind_2809 NC_010581.1 3198276 3199055 D PFAM: protein of unknown function DUF1217; KEGG: bov:BOV_A0118 hypothetical protein; hypothetical protein 3198276..3199055 Beijerinckia indica subsp. indica ATCC 9039 6199653 YP_001833868.1 CDS Bind_2810 NC_010581.1 3199059 3199781 D KEGG: rpe:RPE_1147 flagellar basal body rod protein; flagellar basal body rod protein 3199059..3199781 Beijerinckia indica subsp. indica ATCC 9039 6199654 YP_001833869.1 CDS fliI NC_010581.1 3199955 3201283 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3199955..3201283 Beijerinckia indica subsp. indica ATCC 9039 6201516 YP_001833870.1 CDS Bind_2812 NC_010581.1 3201587 3204685 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(3201587..3204685) Beijerinckia indica subsp. indica ATCC 9039 6201517 YP_001833871.1 CDS Bind_2813 NC_010581.1 3204801 3205712 R PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sen:SACE_3360 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase complement(3204801..3205712) Beijerinckia indica subsp. indica ATCC 9039 6201518 YP_001833872.1 CDS Bind_2814 NC_010581.1 3205709 3206947 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A2115 putative bifunctional arginase/ornithine aminotransferase; ornithine aminotransferase complement(3205709..3206947) Beijerinckia indica subsp. indica ATCC 9039 6201058 YP_001833873.1 CDS Bind_2815 NC_010581.1 3207141 3207641 D PFAM: regulatory protein AsnC/Lrp family; KEGG: pde:Pden_4957 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3207141..3207641 Beijerinckia indica subsp. indica ATCC 9039 6201059 YP_001833874.1 CDS Bind_2816 NC_010581.1 3207794 3208360 D KEGG: pfl:PFL_4129 hypothetical protein; hypothetical protein 3207794..3208360 Beijerinckia indica subsp. indica ATCC 9039 6201060 YP_001833875.1 CDS Bind_2817 NC_010581.1 3208519 3209292 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I2817 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(3208519..3209292) Beijerinckia indica subsp. indica ATCC 9039 6201737 YP_001833876.1 CDS Bind_2818 NC_010581.1 3209430 3210380 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_999 hypothetical protein; LysR family transcriptional regulator 3209430..3210380 Beijerinckia indica subsp. indica ATCC 9039 6201738 YP_001833877.1 CDS Bind_2819 NC_010581.1 3210561 3210956 D KEGG: tcr:510807.10 mucin TcMUCII, putative Pfam: Mucin PROSITE: THR_RICH; hypothetical protein 3210561..3210956 Beijerinckia indica subsp. indica ATCC 9039 6201739 YP_001833878.1 CDS Bind_2820 NC_010581.1 3210972 3213590 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3210972..3213590 Beijerinckia indica subsp. indica ATCC 9039 6201417 YP_001833879.1 CDS Bind_2821 NC_010581.1 3213698 3215428 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(3213698..3215428) Beijerinckia indica subsp. indica ATCC 9039 6201418 YP_001833880.1 CDS Bind_2822 NC_010581.1 3215591 3216607 R PFAM: inner-membrane translocator; KEGG: smd:Smed_4266 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase complement(3215591..3216607) Beijerinckia indica subsp. indica ATCC 9039 6201419 YP_001833881.1 CDS Bind_2823 NC_010581.1 3216653 3218188 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20713 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein complement(3216653..3218188) Beijerinckia indica subsp. indica ATCC 9039 6199156 YP_001833882.1 CDS Bind_2824 NC_010581.1 3218246 3219091 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator complement(3218246..3219091) Beijerinckia indica subsp. indica ATCC 9039 6199157 YP_001833883.1 CDS Bind_2825 NC_010581.1 3219228 3220403 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsh:Rsph17029_2906 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3219228..3220403) Beijerinckia indica subsp. indica ATCC 9039 6199158 YP_001833884.1 CDS Bind_2826 NC_010581.1 3220400 3221536 R PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bra:BRADO0446 conserved hypothetical protein; putative xylose isomerase-like; xylose isomerase domain-containing protein complement(3220400..3221536) Beijerinckia indica subsp. indica ATCC 9039 6199010 YP_001833885.1 CDS Bind_2827 NC_010581.1 3221536 3222657 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2330 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3221536..3222657) Beijerinckia indica subsp. indica ATCC 9039 6199011 YP_001833886.1 CDS Bind_2828 NC_010581.1 3222703 3223695 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2329 inositol 2-dehydrogenase; inositol 2-dehydrogenase complement(3222703..3223695) Beijerinckia indica subsp. indica ATCC 9039 6199012 YP_001833887.1 CDS Bind_2829 NC_010581.1 3223946 3224941 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: acr:Acry_2328 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(3223946..3224941) Beijerinckia indica subsp. indica ATCC 9039 6201660 YP_001833888.1 CDS Bind_2830 NC_010581.1 3224943 3225764 R PFAM: HpcH/HpaI aldolase; KEGG: acr:Acry_2327 HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(3224943..3225764) Beijerinckia indica subsp. indica ATCC 9039 6201661 YP_001833889.1 CDS Bind_2831 NC_010581.1 3225776 3227212 R PFAM: Aldehyde Dehydrogenase_; KEGG: pub:SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P)); aldehyde dehydrogenase complement(3225776..3227212) Beijerinckia indica subsp. indica ATCC 9039 6201662 YP_001833890.1 CDS Bind_2832 NC_010581.1 3227552 3228292 D PFAM: protein of unknown function DUF81; KEGG: xau:Xaut_0652 protein of unknown function DUF81; hypothetical protein 3227552..3228292 Beijerinckia indica subsp. indica ATCC 9039 6198991 YP_001833891.1 CDS Bind_2833 NC_010581.1 3228539 3229474 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: acr:Acry_2326 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3228539..3229474 Beijerinckia indica subsp. indica ATCC 9039 6198992 YP_001833892.1 CDS Bind_2834 NC_010581.1 3229588 3231429 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ppr:PBPRB0462 hypothetical acetolactate synthase, IolD; thiamine pyrophosphate protein central region 3229588..3231429 Beijerinckia indica subsp. indica ATCC 9039 6198993 YP_001833893.1 CDS Bind_2835 NC_010581.1 3231548 3232480 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: acr:Acry_2325 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3231548..3232480 Beijerinckia indica subsp. indica ATCC 9039 6201576 YP_001833894.1 CDS Bind_2836 NC_010581.1 3232461 3233270 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_2324 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3232461..3233270 Beijerinckia indica subsp. indica ATCC 9039 6201577 YP_001833895.1 CDS Bind_2837 NC_010581.1 3233584 3234513 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 3233584..3234513 Beijerinckia indica subsp. indica ATCC 9039 6201578 YP_001833896.1 CDS Bind_2838 NC_010581.1 3234773 3236140 D PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB 3234773..3236140 Beijerinckia indica subsp. indica ATCC 9039 6199434 YP_001833897.1 CDS Bind_2839 NC_010581.1 3236326 3236823 R KEGG: bja:bll5176 hypothetical protein; hypothetical protein complement(3236326..3236823) Beijerinckia indica subsp. indica ATCC 9039 6199435 YP_001833898.1 CDS Bind_2840 NC_010581.1 3237077 3237748 R PFAM: chromosome segregation and condensation protein ScpB; KEGG: nha:Nham_4583 putative transcriptional regulator; chromosome segregation and condensation protein ScpB complement(3237077..3237748) Beijerinckia indica subsp. indica ATCC 9039 6199436 YP_001833899.1 CDS Bind_2841 NC_010581.1 3237751 3238746 R PFAM: protein of unknown function DUF1403; KEGG: nha:Nham_4582 protein of unknown function DUF1403; hypothetical protein complement(3237751..3238746) Beijerinckia indica subsp. indica ATCC 9039 6199416 YP_001833900.1 CDS Bind_2842 NC_010581.1 3238873 3241692 R TIGRFAM: conserved hypothetical membrane protein; KEGG: mex:Mext_1457 hypothetical protein; hypothetical protein complement(3238873..3241692) Beijerinckia indica subsp. indica ATCC 9039 6199417 YP_001833901.1 CDS Bind_2843 NC_010581.1 3241692 3242630 R KEGG: mex:Mext_1458 protein of unknown function DUF58; hypothetical protein complement(3241692..3242630) Beijerinckia indica subsp. indica ATCC 9039 6199418 YP_001833902.1 CDS Bind_2844 NC_010581.1 3242635 3243636 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: azc:AZC_3509 putative methanol dehydrogenase regulator; ATPase complement(3242635..3243636) Beijerinckia indica subsp. indica ATCC 9039 6200672 YP_001833903.1 CDS Bind_2845 NC_010581.1 3243957 3244583 D PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein; hypothetical protein 3243957..3244583 Beijerinckia indica subsp. indica ATCC 9039 6200673 YP_001833904.1 CDS Bind_2846 NC_010581.1 3244667 3245920 D PFAM: Polynucleotide adenylyltransferase region; KEGG: azc:AZC_3505 putative poly(A) polymerase; polynucleotide adenylyltransferase 3244667..3245920 Beijerinckia indica subsp. indica ATCC 9039 6200674 YP_001833905.1 CDS Bind_2847 NC_010581.1 3246109 3246471 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: mca:MCA0225 Rieske 2Fe-2S family protein; Rieske (2Fe-2S) domain-containing protein complement(3246109..3246471) Beijerinckia indica subsp. indica ATCC 9039 6198721 YP_001833906.1 CDS Bind_2848 NC_010581.1 3246832 3247617 D KEGG: azc:AZC_1519 putative macrocin-O-methyltransferase domain protein; macrocin-O-methyltransferase domain-containing protein 3246832..3247617 Beijerinckia indica subsp. indica ATCC 9039 6198722 YP_001833907.1 CDS Bind_2849 NC_010581.1 3248024 3249178 D PFAM: acyltransferase 3; KEGG: mxa:MXAN_3238 acyltransferase family protein; acyltransferase 3 3248024..3249178 Beijerinckia indica subsp. indica ATCC 9039 6198723 YP_001833908.1 CDS Bind_2850 NC_010581.1 3249175 3250419 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3249175..3250419) Beijerinckia indica subsp. indica ATCC 9039 6200261 YP_001833909.1 CDS Bind_2851 NC_010581.1 3250659 3251033 R PFAM: protein of unknown function DUF779; KEGG: gbe:GbCGDNIH1_1023 hypothetical protein; hypothetical protein complement(3250659..3251033) Beijerinckia indica subsp. indica ATCC 9039 6200262 YP_001833910.1 CDS Bind_2852 NC_010581.1 3251130 3252650 R PFAM: Aldehyde Dehydrogenase_; KEGG: gbe:GbCGDNIH1_1022 aldehyde dehydrogenase; aldehyde dehydrogenase complement(3251130..3252650) Beijerinckia indica subsp. indica ATCC 9039 6200263 YP_001833911.1 CDS Bind_2853 NC_010581.1 3253192 3254100 R KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3253192..3254100) Beijerinckia indica subsp. indica ATCC 9039 6198729 YP_001833912.1 CDS Bind_2854 NC_010581.1 3254334 3255359 D TIGRFAM: TonB family protein; KEGG: rru:Rru_A2153 TonB-like; TonB family protein 3254334..3255359 Beijerinckia indica subsp. indica ATCC 9039 6198730 YP_001833913.1 CDS Bind_2855 NC_010581.1 3255387 3255881 R KEGG: pen:PSEEN4434 hypothetical protein; hypothetical protein complement(3255387..3255881) Beijerinckia indica subsp. indica ATCC 9039 6198731 YP_001833914.1 CDS Bind_2856 NC_010581.1 3256219 3257643 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: xau:Xaut_1067 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(3256219..3257643) Beijerinckia indica subsp. indica ATCC 9039 6199460 YP_001833915.1 CDS Bind_2857 NC_010581.1 3258224 3259921 R KEGG: gvi:gll4244 unknown protein; hypothetical protein complement(3258224..3259921) Beijerinckia indica subsp. indica ATCC 9039 6199461 YP_001833916.1 CDS Bind_2858 NC_010581.1 3260193 3261626 R KEGG: reh:H16_A3602 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(3260193..3261626) Beijerinckia indica subsp. indica ATCC 9039 6199462 YP_001833917.1 CDS Bind_2859 NC_010581.1 3261685 3263307 R PFAM: Aldehyde Dehydrogenase_; KEGG: bmu:Bmul_5161 aldehyde dehydrogenase; aldehyde dehydrogenase complement(3261685..3263307) Beijerinckia indica subsp. indica ATCC 9039 6200525 YP_001833918.1 CDS Bind_2860 NC_010581.1 3263483 3264847 R PFAM: Carbohydrate-selective porin OprB; KEGG: psb:Psyr_1117 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(3263483..3264847) Beijerinckia indica subsp. indica ATCC 9039 6200526 YP_001833919.1 CDS Bind_2861 NC_010581.1 3264953 3265882 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(3264953..3265882) Beijerinckia indica subsp. indica ATCC 9039 6200527 YP_001833920.1 CDS Bind_2862 NC_010581.1 3265956 3266993 R PFAM: inner-membrane translocator; KEGG: pin:Ping_2807 inner-membrane translocator; monosaccharide-transporting ATPase complement(3265956..3266993) Beijerinckia indica subsp. indica ATCC 9039 6198620 YP_001833921.1 CDS Bind_2863 NC_010581.1 3267048 3268604 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpd:BURPS668_A0286 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein; ABC transporter-like protein complement(3267048..3268604) Beijerinckia indica subsp. indica ATCC 9039 6198621 YP_001833922.1 CDS Bind_2864 NC_010581.1 3269027 3270262 D PFAM: ROK family protein; KEGG: rle:RL0488 putative ROK family transcriptional regulator; ROK family protein 3269027..3270262 Beijerinckia indica subsp. indica ATCC 9039 6198622 YP_001833923.1 CDS Bind_2865 NC_010581.1 3270256 3270708 D PFAM: RbsD or FucU transport; KEGG: xau:Xaut_2417 RbsD or FucU transport; transport protein RbsD/FucU 3270256..3270708 Beijerinckia indica subsp. indica ATCC 9039 6201510 YP_001833924.1 CDS Bind_2866 NC_010581.1 3270705 3271673 D PFAM: PfkB domain protein; KEGG: xau:Xaut_2416 PfkB domain protein; ribokinase-like domain-containing protein 3270705..3271673 Beijerinckia indica subsp. indica ATCC 9039 6201511 YP_001833925.1 CDS Bind_2867 NC_010581.1 3271970 3273448 D KEGG: azc:AZC_3629 glucose-6-phosphate dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 3271970..3273448 Beijerinckia indica subsp. indica ATCC 9039 6201512 YP_001833926.1 CDS Bind_2868 NC_010581.1 3273555 3275396 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3273555..3275396 Beijerinckia indica subsp. indica ATCC 9039 6198185 YP_001833927.1 CDS Bind_2869 NC_010581.1 3275393 3276052 D KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 3275393..3276052 Beijerinckia indica subsp. indica ATCC 9039 6198186 YP_001833928.1 CDS Bind_2870 NC_010581.1 3276276 3276929 R KEGG: pnu:Pnuc_1366 hypothetical protein; hypothetical protein complement(3276276..3276929) Beijerinckia indica subsp. indica ATCC 9039 6198187 YP_001833929.1 CDS Bind_2871 NC_010581.1 3277140 3277823 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3277140..3277823) Beijerinckia indica subsp. indica ATCC 9039 6198188 YP_001833930.1 CDS Bind_2872 NC_010581.1 3277820 3278794 R PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bbt:BBta_2068 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase complement(3277820..3278794) Beijerinckia indica subsp. indica ATCC 9039 6198189 YP_001833931.1 CDS Bind_2873 NC_010581.1 3278899 3279708 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: jan:Jann_3839 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(3278899..3279708) Beijerinckia indica subsp. indica ATCC 9039 6198190 YP_001833932.1 CDS Bind_2874 NC_010581.1 3279894 3281201 D PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL110019 putative transmembrane transporter; major facilitator transporter 3279894..3281201 Beijerinckia indica subsp. indica ATCC 9039 6201713 YP_001833933.1 CDS Bind_2875 NC_010581.1 3281361 3283160 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3281361..3283160 Beijerinckia indica subsp. indica ATCC 9039 6201714 YP_001833934.1 CDS Bind_2876 NC_010581.1 3283188 3284126 D PFAM: PfkB domain protein; KEGG: bra:BRADO1805 ketodeoxygluconokinase; ribokinase-like domain-containing protein 3283188..3284126 Beijerinckia indica subsp. indica ATCC 9039 6201715 YP_001833935.1 CDS Bind_2877 NC_010581.1 3284263 3285570 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3284263..3285570) Beijerinckia indica subsp. indica ATCC 9039 6198341 YP_001833936.1 CDS Bind_2878 NC_010581.1 3285567 3288779 R PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein; acriflavin resistance protein complement(3285567..3288779) Beijerinckia indica subsp. indica ATCC 9039 6198342 YP_001833937.1 CDS Bind_2879 NC_010581.1 3288962 3289252 R PFAM: protein of unknown function YGGT; KEGG: azc:AZC_3317 hypothetical protein; hypothetical protein complement(3288962..3289252) Beijerinckia indica subsp. indica ATCC 9039 6198343 YP_001833938.1 CDS Bind_2880 NC_010581.1 3290210 3290788 D PFAM: regulatory protein TetR; KEGG: atc:AGR_C_478 hypothetical protein; TetR family transcriptional regulator 3290210..3290788 Beijerinckia indica subsp. indica ATCC 9039 6198351 YP_001833939.1 CDS Bind_2881 NC_010581.1 3290927 3291415 D KEGG: atc:AGR_C_479 hypothetical protein; hypothetical protein 3290927..3291415 Beijerinckia indica subsp. indica ATCC 9039 6198331 YP_001833940.1 CDS Bind_2882 NC_010581.1 3291525 3291803 R PFAM: transposase IS3/IS911 family protein; KEGG: acr:Acry_3414 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3291525..3291803) Beijerinckia indica subsp. indica ATCC 9039 6198332 YP_001833941.1 CDS Bind_2883 NC_010581.1 3291967 3292638 D PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: rpb:RPB_2557 transcriptional regulator, TetR family; TetR family transcriptional regulator 3291967..3292638 Beijerinckia indica subsp. indica ATCC 9039 6198333 YP_001833942.1 CDS Bind_2884 NC_010581.1 3292715 3293323 D KEGG: xau:Xaut_4923 hypothetical protein; hypothetical protein 3292715..3293323 Beijerinckia indica subsp. indica ATCC 9039 6200620 YP_001833943.1 CDS Bind_2885 NC_010581.1 3293423 3293704 D KEGG: rpe:RPE_3838 hypothetical protein; hypothetical protein 3293423..3293704 Beijerinckia indica subsp. indica ATCC 9039 6200621 YP_001833944.1 CDS Bind_2886 NC_010581.1 3293735 3294184 D KEGG: rpe:RPE_3839 hypothetical protein; hypothetical protein 3293735..3294184 Beijerinckia indica subsp. indica ATCC 9039 6200622 YP_001833945.1 CDS Bind_2887 NC_010581.1 3294312 3294824 D PFAM: membrane protein of uknown function UCP014873; KEGG: smd:Smed_0077 membrane protein of uknown function UCP014873; hypothetical protein 3294312..3294824 Beijerinckia indica subsp. indica ATCC 9039 6200600 YP_001833946.1 CDS Bind_2888 NC_010581.1 3295195 3296322 D KEGG: ckl:CKL_2871 hypothetical protein; hypothetical protein 3295195..3296322 Beijerinckia indica subsp. indica ATCC 9039 6200601 YP_001833947.1 CDS Bind_2889 NC_010581.1 3296559 3296921 R KEGG: xau:Xaut_0788 hypothetical protein; hypothetical protein complement(3296559..3296921) Beijerinckia indica subsp. indica ATCC 9039 6200602 YP_001833948.1 CDS Bind_2890 NC_010581.1 3296918 3297106 R KEGG: xau:Xaut_0787 hypothetical protein; hypothetical protein complement(3296918..3297106) Beijerinckia indica subsp. indica ATCC 9039 6198251 YP_001833949.1 CDS Bind_2891 NC_010581.1 3297377 3298105 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1860 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(3297377..3298105) Beijerinckia indica subsp. indica ATCC 9039 6198252 YP_001833950.1 CDS Bind_2892 NC_010581.1 3298173 3298757 R PFAM: regulatory protein TetR; KEGG: bam:Bamb_3672 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3298173..3298757) Beijerinckia indica subsp. indica ATCC 9039 6198253 YP_001833951.1 CDS Bind_2893 NC_010581.1 3299265 3299552 D PFAM: Prophage CP4-57 regulatory; KEGG: mes:Meso_0497 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 3299265..3299552 Beijerinckia indica subsp. indica ATCC 9039 6198254 YP_001833952.1 CDS Bind_2895 NC_010581.1 3301041 3302642 R TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: atc:AGR_C_480 GMP synthase (glutamine-hydrolysing); GMP synthase complement(3301041..3302642) Beijerinckia indica subsp. indica ATCC 9039 6198256 YP_001833953.1 CDS Bind_2896 NC_010581.1 3302938 3303801 R TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 methyltransferase FkbM family; FkbM family methyltransferase complement(3302938..3303801) Beijerinckia indica subsp. indica ATCC 9039 6200583 YP_001833954.1 CDS Bind_2897 NC_010581.1 3304232 3305065 D KEGG: pla:Plav_2600 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 3304232..3305065 Beijerinckia indica subsp. indica ATCC 9039 6200584 YP_001833955.1 CDS Bind_2898 NC_010581.1 3305062 3305787 D PFAM: DNA repair protein RadC; KEGG: rpc:RPC_0575 DNA repair protein RadC; DNA repair protein RadC 3305062..3305787 Beijerinckia indica subsp. indica ATCC 9039 6200585 YP_001833956.1 CDS Bind_2899 NC_010581.1 3305889 3306773 D PFAM: EAL domain protein; KEGG: azc:AZC_4658 conserved putative membrane protein; diguanylate phosphodiesterase 3305889..3306773 Beijerinckia indica subsp. indica ATCC 9039 6200367 YP_001833957.1 CDS Bind_2900 NC_010581.1 3306724 3307023 R PFAM: Usg family protein; KEGG: bja:bsl5624 hypothetical protein; Usg family protein complement(3306724..3307023) Beijerinckia indica subsp. indica ATCC 9039 6200368 YP_001833958.1 CDS Bind_2901 NC_010581.1 3307251 3307859 R PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bbt:BBta_5312 hypothetical protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(3307251..3307859) Beijerinckia indica subsp. indica ATCC 9039 6200369 YP_001833959.1 CDS Bind_2902 NC_010581.1 3307886 3308638 R KEGG: rpc:RPC_1636 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor complement(3307886..3308638) Beijerinckia indica subsp. indica ATCC 9039 6199744 YP_001833960.1 CDS Bind_2903 NC_010581.1 3308638 3308955 R PFAM: protein of unknown function DUF182; KEGG: mex:Mext_1055 protein of unknown function DUF182; hypothetical protein complement(3308638..3308955) Beijerinckia indica subsp. indica ATCC 9039 6199745 YP_001833961.1 CDS Bind_2904 NC_010581.1 3309221 3310354 D TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_A1692 alpha/beta hydrolase; 3-oxoadipate enol-lactonase 3309221..3310354 Beijerinckia indica subsp. indica ATCC 9039 6199746 YP_001833962.1 CDS Bind_2905 NC_010581.1 3310375 3311022 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: cya:CYA_2030 TonB family protein; TonB family protein complement(3310375..3311022) Beijerinckia indica subsp. indica ATCC 9039 6198168 YP_001833963.1 CDS Bind_2906 NC_010581.1 3311134 3311928 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR0700 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3311134..3311928) Beijerinckia indica subsp. indica ATCC 9039 6198169 YP_001833964.1 CDS Bind_2907 NC_010581.1 3312233 3313012 D TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb2_1006 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 3312233..3313012 Beijerinckia indica subsp. indica ATCC 9039 6198170 YP_001833965.1 CDS Bind_2908 NC_010581.1 3313111 3314682 D TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: nha:Nham_0050 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 3313111..3314682 Beijerinckia indica subsp. indica ATCC 9039 6198163 YP_001833966.1 CDS Bind_2909 NC_010581.1 3314739 3315155 R KEGG: bur:Bcep18194_B1796 hypothetical protein; hypothetical protein complement(3314739..3315155) Beijerinckia indica subsp. indica ATCC 9039 6198164 YP_001833967.1 CDS Bind_2910 NC_010581.1 3315568 3316791 D KEGG: pla:Plav_3656 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3315568..3316791 Beijerinckia indica subsp. indica ATCC 9039 6198165 YP_001833968.1 CDS Bind_2911 NC_010581.1 3316788 3317270 D KEGG: xau:Xaut_0077 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 3316788..3317270 Beijerinckia indica subsp. indica ATCC 9039 6198173 YP_001833969.1 CDS Bind_2912 NC_010581.1 3317267 3317716 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: azc:AZC_0708 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 3317267..3317716 Beijerinckia indica subsp. indica ATCC 9039 6198174 YP_001833970.1 CDS Bind_2913 NC_010581.1 3317754 3318113 D hypothetical protein 3317754..3318113 Beijerinckia indica subsp. indica ATCC 9039 6198175 YP_001833971.1 CDS Bind_2914 NC_010581.1 3318854 3319318 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: xau:Xaut_2034 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3318854..3319318 Beijerinckia indica subsp. indica ATCC 9039 6198309 YP_001833972.1 CDS Bind_2915 NC_010581.1 3319355 3320359 R PFAM: Glucokinase; KEGG: smd:Smed_3369 glucokinase; glucokinase complement(3319355..3320359) Beijerinckia indica subsp. indica ATCC 9039 6198310 YP_001833973.1 CDS Bind_2916 NC_010581.1 3320556 3322172 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bmb:BruAb1_0967 FumB, fumarate hydratase, class I; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 3320556..3322172 Beijerinckia indica subsp. indica ATCC 9039 6198311 YP_001833974.1 CDS Bind_2917 NC_010581.1 3322278 3323915 R PFAM: protein of unknown function DUF949; KEGG: xau:Xaut_0510 protein of unknown function DUF949; hypothetical protein complement(3322278..3323915) Beijerinckia indica subsp. indica ATCC 9039 6198289 YP_001833975.1 CDS Bind_2918 NC_010581.1 3324111 3325064 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(3324111..3325064) Beijerinckia indica subsp. indica ATCC 9039 6198290 YP_001833976.1 CDS Bind_2919 NC_010581.1 3325231 3327555 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_5973 isoquinoline 1-oxidoreductase beta subunit; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(3325231..3327555) Beijerinckia indica subsp. indica ATCC 9039 6198291 YP_001833977.1 CDS Bind_2920 NC_010581.1 3327557 3328009 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_5972 isoquinoline 1-oxidoreductase alpha subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(3327557..3328009) Beijerinckia indica subsp. indica ATCC 9039 6198299 YP_001833978.1 CDS Bind_2921 NC_010581.1 3328438 3330033 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bja:blr4455 putative outer-membrane immunogenic protein precursor; RND efflux system outer membrane lipoprotein 3328438..3330033 Beijerinckia indica subsp. indica ATCC 9039 6198300 YP_001833979.1 CDS Bind_2922 NC_010581.1 3330030 3331409 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_2569 secretion protein HlyD; RND family efflux transporter MFP subunit 3330030..3331409 Beijerinckia indica subsp. indica ATCC 9039 6198301 YP_001833980.1 CDS Bind_2923 NC_010581.1 3331406 3334630 D PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2559 acriflavin resistance protein; acriflavin resistance protein 3331406..3334630 Beijerinckia indica subsp. indica ATCC 9039 6198364 YP_001833981.1 CDS Bind_2924 NC_010581.1 3334643 3337777 D PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2560 acriflavin resistance protein; acriflavin resistance protein 3334643..3337777 Beijerinckia indica subsp. indica ATCC 9039 6198365 YP_001833982.1 CDS Bind_2925 NC_010581.1 3337911 3338768 D PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: xau:Xaut_3512 ferric reductase domain protein transmembrane component domain; ferric reductase domain-containing protein 3337911..3338768 Beijerinckia indica subsp. indica ATCC 9039 6198366 YP_001833983.1 CDS Bind_2926 NC_010581.1 3338777 3339445 R PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: azc:AZC_1017 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase complement(3338777..3339445) Beijerinckia indica subsp. indica ATCC 9039 6198370 YP_001833984.1 CDS Bind_2927 NC_010581.1 3339523 3339819 R KEGG: xau:Xaut_2218 hypothetical protein; hypothetical protein complement(3339523..3339819) Beijerinckia indica subsp. indica ATCC 9039 6198371 YP_001833985.1 CDS Bind_2928 NC_010581.1 3340200 3340493 R TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_0395 integration host factor subunit beta; integration host factor subunit beta complement(3340200..3340493) Beijerinckia indica subsp. indica ATCC 9039 6198372 YP_001833986.1 CDS Bind_2929 NC_010581.1 3340553 3341527 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: azc:AZC_3717 peptidase S49 protein; signal peptide peptidase SppA, 36K type complement(3340553..3341527) Beijerinckia indica subsp. indica ATCC 9039 6198361 YP_001833987.1 CDS Bind_2930 NC_010581.1 3341639 3342142 R PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2145 NUDIX hydrolase; NUDIX hydrolase complement(3341639..3342142) Beijerinckia indica subsp. indica ATCC 9039 6198362 YP_001833988.1 CDS Bind_2931 NC_010581.1 3342343 3343680 R KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(3342343..3343680) Beijerinckia indica subsp. indica ATCC 9039 6198363 YP_001833989.1 CDS Bind_2932 NC_010581.1 3343680 3345059 R PFAM: Peptidase M23; KEGG: bja:blr0433 hypothetical protein; peptidase M23 complement(3343680..3345059) Beijerinckia indica subsp. indica ATCC 9039 6201408 YP_001833990.1 CDS Bind_2933 NC_010581.1 3345160 3345672 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(3345160..3345672) Beijerinckia indica subsp. indica ATCC 9039 6201409 YP_001833991.1 CDS Bind_2934 NC_010581.1 3345757 3346143 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mlo:mll4005 hypothetical protein; iojap family protein complement(3345757..3346143) Beijerinckia indica subsp. indica ATCC 9039 6201410 YP_001833992.1 CDS Bind_2935 NC_010581.1 3346287 3347618 R KEGG: bja:blr3152 HSP70 family molecular chaperone; HSP70 family molecular chaperone complement(3346287..3347618) Beijerinckia indica subsp. indica ATCC 9039 6201767 YP_001833993.1 CDS rpsA NC_010581.1 3347710 3349443 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3347710..3349443) Beijerinckia indica subsp. indica ATCC 9039 6201768 YP_001833994.1 CDS Bind_2937 NC_010581.1 3349716 3350951 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpd:RPD_4002 TonB-like; TonB family protein complement(3349716..3350951) Beijerinckia indica subsp. indica ATCC 9039 6201769 YP_001833995.1 CDS Bind_2938 NC_010581.1 3351282 3351917 R KEGG: xau:Xaut_1111 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase complement(3351282..3351917) Beijerinckia indica subsp. indica ATCC 9039 6198355 YP_001833996.1 CDS Bind_2939 NC_010581.1 3352341 3352706 D PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein; hypothetical protein 3352341..3352706 Beijerinckia indica subsp. indica ATCC 9039 6198356 YP_001833997.1 CDS Bind_2940 NC_010581.1 3353386 3353958 R KEGG: lic:LIC12825 hypothetical protein; hypothetical protein complement(3353386..3353958) Beijerinckia indica subsp. indica ATCC 9039 6198320 YP_001833998.1 CDS Bind_2941 NC_010581.1 3354103 3354723 R KEGG: rha:RHA1_ro00612 hypothetical protein; hypothetical protein complement(3354103..3354723) Beijerinckia indica subsp. indica ATCC 9039 6198321 YP_001833999.1 CDS Bind_2942 NC_010581.1 3354888 3355817 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5221 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3354888..3355817) Beijerinckia indica subsp. indica ATCC 9039 6199036 YP_001834000.1 CDS Bind_2943 NC_010581.1 3355849 3356799 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_3743 putative glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3355849..3356799 Beijerinckia indica subsp. indica ATCC 9039 6199037 YP_001834001.1 CDS Bind_2944 NC_010581.1 3356817 3357791 R PFAM: protein of unknown function UPF0074; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bja:blr7860 hypothetical protein; helix-turn-helix type 11 domain-containing protein complement(3356817..3357791) Beijerinckia indica subsp. indica ATCC 9039 6199038 YP_001834002.1 CDS Bind_2945 NC_010581.1 3357885 3358400 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: pfo:Pfl_3712 cupin region; cupin 3357885..3358400 Beijerinckia indica subsp. indica ATCC 9039 6198268 YP_001834003.1 CDS Bind_2946 NC_010581.1 3358436 3358984 D KEGG: nfa:nfa53680 putative methylated-DNA:protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3358436..3358984 Beijerinckia indica subsp. indica ATCC 9039 6198269 YP_001834004.1 CDS Bind_2947 NC_010581.1 3359030 3359434 D KEGG: pla:Plav_1985 hypothetical protein; hypothetical protein 3359030..3359434 Beijerinckia indica subsp. indica ATCC 9039 6198270 YP_001834005.1 CDS Bind_2948 NC_010581.1 3359700 3360272 D KEGG: rpb:RPB_2974 hypothetical protein; hypothetical protein 3359700..3360272 Beijerinckia indica subsp. indica ATCC 9039 6198391 YP_001834006.1 CDS Bind_2949 NC_010581.1 3360433 3360885 D PFAM: regulatory protein MarR; KEGG: gdi:GDI0347 putative transcriptional regulator, family MarR; MarR family transcriptional regulator 3360433..3360885 Beijerinckia indica subsp. indica ATCC 9039 6198392 YP_001834007.1 CDS Bind_2950 NC_010581.1 3360944 3361510 D PFAM: isochorismatase hydrolase; KEGG: gdi:GDI0348 isochorismatase hydrolase; isochorismatase hydrolase 3360944..3361510 Beijerinckia indica subsp. indica ATCC 9039 6198393 YP_001834008.1 CDS Bind_2951 NC_010581.1 3361512 3361841 D KEGG: bxe:Bxe_A1711 hypothetical protein; hypothetical protein 3361512..3361841 Beijerinckia indica subsp. indica ATCC 9039 6198386 YP_001834009.1 CDS Bind_2952 NC_010581.1 3361838 3363055 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bam:Bamb_3727 major facilitator superfamily MFS_1; major facilitator transporter 3361838..3363055 Beijerinckia indica subsp. indica ATCC 9039 6198387 YP_001834010.1 CDS Bind_2954 NC_010581.1 3363335 3364098 R KEGG: bcs:BCAN_A0546 hypothetical protein; transposase complement(join(3363335..3363772,3363772..3364098)) Beijerinckia indica subsp. indica ATCC 9039 6198380 YP_001834011.1 CDS Bind_2955 NC_010581.1 3364664 3365629 D PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO0452 putative bifunctional protein: class I glutamine amidotransferase-like (N-terminal), transcriptional regulator protein AraC/XylS family (C-terminal); AraC family transcriptional regulator 3364664..3365629 Beijerinckia indica subsp. indica ATCC 9039 6198381 YP_001834012.1 CDS Bind_2956 NC_010581.1 3365845 3366603 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_5206 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3365845..3366603 Beijerinckia indica subsp. indica ATCC 9039 6198382 YP_001834013.1 CDS Bind_2957 NC_010581.1 3366746 3367093 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN2135 carboxymuconolactone decarboxylase; alkylhydroperoxidase 3366746..3367093 Beijerinckia indica subsp. indica ATCC 9039 6201589 YP_001834014.1 CDS Bind_2958 NC_010581.1 3367274 3367534 D KEGG: bbt:BBta_3039 putative succinate-semialdehyde dehydrogenase; putative succinate-semialdehyde dehydrogenase 3367274..3367534 Beijerinckia indica subsp. indica ATCC 9039 6201590 YP_001834015.1 CDS Bind_2959 NC_010581.1 3367479 3367838 R KEGG: reh:H16_B1352 insecticidal toxin complex protein; hypothetical protein complement(3367479..3367838) Beijerinckia indica subsp. indica ATCC 9039 6201591 YP_001834016.1 CDS Bind_2960 NC_010581.1 3367984 3368202 R hypothetical protein complement(3367984..3368202) Beijerinckia indica subsp. indica ATCC 9039 6198367 YP_001834017.1 CDS Bind_2961 NC_010581.1 3368422 3369417 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0260 putative NADPH quinone oxidoreductase protein; alcohol dehydrogenase complement(3368422..3369417) Beijerinckia indica subsp. indica ATCC 9039 6198368 YP_001834018.1 CDS Bind_2962 NC_010581.1 3369517 3370392 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3081 transcriptional regulator, LysR family; LysR family transcriptional regulator 3369517..3370392 Beijerinckia indica subsp. indica ATCC 9039 6198369 YP_001834019.1 CDS Bind_2963 NC_010581.1 3370451 3371446 R PFAM: aldo/keto reductase; KEGG: psp:PSPPH_1746 oxidoreductase, aldo/keto reductase family; aldo/keto reductase complement(3370451..3371446) Beijerinckia indica subsp. indica ATCC 9039 6198358 YP_001834020.1 CDS Bind_2964 NC_010581.1 3371674 3372513 R PFAM: beta-lactamase domain protein; KEGG: rru:Rru_A0028 beta-lactamase-like; beta-lactamase domain-containing protein complement(3371674..3372513) Beijerinckia indica subsp. indica ATCC 9039 6198359 YP_001834021.1 CDS Bind_2965 NC_010581.1 3372534 3372860 R KEGG: rru:Rru_A0029 hypothetical protein; hypothetical protein complement(3372534..3372860) Beijerinckia indica subsp. indica ATCC 9039 6198360 YP_001834022.1 CDS Bind_2966 NC_010581.1 3372867 3373412 R KEGG: rru:Rru_A0030 hypothetical protein; hypothetical protein complement(3372867..3373412) Beijerinckia indica subsp. indica ATCC 9039 6198347 YP_001834023.1 CDS Bind_2967 NC_010581.1 3373583 3374461 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A0031 transcriptional regulator, LysR family; LysR family transcriptional regulator 3373583..3374461 Beijerinckia indica subsp. indica ATCC 9039 6198348 YP_001834024.1 CDS Bind_2968 NC_010581.1 3375071 3376408 D PFAM: extracellular solute-binding protein family 1; KEGG: azo:azo3835 putative regulatory lipoprotein; extracellular solute-binding protein 3375071..3376408 Beijerinckia indica subsp. indica ATCC 9039 6198349 YP_001834025.1 CDS Bind_2969 NC_010581.1 3376405 3377775 D PFAM: protein of unknown function DUF1111; KEGG: pen:PSEEN2346 hypothetical protein; hypothetical protein 3376405..3377775 Beijerinckia indica subsp. indica ATCC 9039 6198338 YP_001834026.1 CDS Bind_2970 NC_010581.1 3377810 3379966 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA0153 possible outer membrane receptor for Fe transport; TonB-dependent receptor 3377810..3379966 Beijerinckia indica subsp. indica ATCC 9039 6198339 YP_001834027.1 CDS Bind_2971 NC_010581.1 3380038 3380801 D KEGG: bcs:BCAN_A0546 hypothetical protein; transposase join(3380038..3380364,3380364..3380801) Beijerinckia indica subsp. indica ATCC 9039 6198340 YP_001834028.1 CDS Bind_2973 NC_010581.1 3382004 3382777 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sal:Sala_2525 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3382004..3382777 Beijerinckia indica subsp. indica ATCC 9039 6198131 YP_001834029.1 CDS Bind_2974 NC_010581.1 3382837 3383508 D PFAM: autoinducer synthesis protein; KEGG: sal:Sala_2589 autoinducer synthesis protein; autoinducer synthesis protein 3382837..3383508 Beijerinckia indica subsp. indica ATCC 9039 6198132 YP_001834030.1 CDS Bind_2975 NC_010581.1 3383498 3384394 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: sal:Sala_2590 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 3383498..3384394 Beijerinckia indica subsp. indica ATCC 9039 6198135 YP_001834031.1 CDS Bind_2976 NC_010581.1 3384461 3385228 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: swi:Swit_5012 regulatory protein, LuxR; LuxR family transcriptional regulator complement(3384461..3385228) Beijerinckia indica subsp. indica ATCC 9039 6198136 YP_001834032.1 CDS Bind_2977 NC_010581.1 3385761 3386669 D PFAM: 2OG-Fe(II) oxygenase; KEGG: plu:plu0930 hypothetical protein; 2OG-Fe(II) oxygenase 3385761..3386669 Beijerinckia indica subsp. indica ATCC 9039 6198137 YP_001834033.1 CDS Bind_2979 NC_010581.1 3387118 3388020 R KEGG: bpe:BP2856 hypothetical protein; hypothetical protein complement(3387118..3388020) Beijerinckia indica subsp. indica ATCC 9039 6201450 YP_001834034.1 CDS Bind_2980 NC_010581.1 3388158 3389057 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpe:BP2857 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 3388158..3389057 Beijerinckia indica subsp. indica ATCC 9039 6201451 YP_001834035.1 CDS Bind_2981 NC_010581.1 3389257 3389799 R PFAM: regulatory protein TetR; KEGG: ava:Ava_1596 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3389257..3389799) Beijerinckia indica subsp. indica ATCC 9039 6201026 YP_001834036.1 CDS Bind_2982 NC_010581.1 3389848 3390702 D KEGG: bmu:Bmul_4384 hypothetical protein; hypothetical protein 3389848..3390702 Beijerinckia indica subsp. indica ATCC 9039 6201027 YP_001834037.1 CDS Bind_2983 NC_010581.1 3391396 3391755 D hypothetical protein 3391396..3391755 Beijerinckia indica subsp. indica ATCC 9039 6201028 YP_001834038.1 CDS Bind_2984 NC_010581.1 3392392 3392886 R PFAM: protein of unknown function DUF892; KEGG: azc:AZC_2285 hypothetical protein; hypothetical protein complement(3392392..3392886) Beijerinckia indica subsp. indica ATCC 9039 6201253 YP_001834039.1 CDS Bind_2985 NC_010581.1 3393675 3394499 D KEGG: gdi:GDI1519 hypothetical protein; hypothetical protein 3393675..3394499 Beijerinckia indica subsp. indica ATCC 9039 6201254 YP_001834040.1 CDS Bind_2986 NC_010581.1 3394641 3395255 R PFAM: isochorismatase hydrolase; KEGG: mex:Mext_0062 isochorismatase hydrolase; isochorismatase hydrolase complement(3394641..3395255) Beijerinckia indica subsp. indica ATCC 9039 6201255 YP_001834041.1 CDS Bind_2987 NC_010581.1 3395280 3395879 R PFAM: Inorganic pyrophosphatase; KEGG: sus:Acid_3034 inorganic pyrophosphatase; inorganic pyrophosphatase complement(3395280..3395879) Beijerinckia indica subsp. indica ATCC 9039 6201399 YP_001834042.1 CDS Bind_2989 NC_010581.1 3396603 3397622 R PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein complement(3396603..3397622) Beijerinckia indica subsp. indica ATCC 9039 6201401 YP_001834043.1 CDS Bind_2990 NC_010581.1 3397876 3398886 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3397876..3398886) Beijerinckia indica subsp. indica ATCC 9039 6198325 YP_001834044.1 CDS Bind_2991 NC_010581.1 3398944 3399198 R KEGG: rpd:RPD_3215 hypothetical protein; hypothetical protein complement(3398944..3399198) Beijerinckia indica subsp. indica ATCC 9039 6198326 YP_001834045.1 CDS Bind_2992 NC_010581.1 3399404 3400261 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110421 putative oxidoreductase/stress-related protein; short-chain dehydrogenase/reductase SDR complement(3399404..3400261) Beijerinckia indica subsp. indica ATCC 9039 6198327 YP_001834046.1 CDS Bind_2993 NC_010581.1 3400778 3400999 R KEGG: mma:MM_0228 hypothetical protein; hypothetical protein complement(3400778..3400999) Beijerinckia indica subsp. indica ATCC 9039 6198317 YP_001834047.1 CDS Bind_2994 NC_010581.1 3401141 3402373 D KEGG: bta:789503 similar to mucin 5; hypothetical protein 3401141..3402373 Beijerinckia indica subsp. indica ATCC 9039 6198318 YP_001834048.1 CDS Bind_2995 NC_010581.1 3403150 3404283 R PFAM: protein of unknown function UPF0118; KEGG: gox:GOX0988 hypothetical protein; hypothetical protein complement(3403150..3404283) Beijerinckia indica subsp. indica ATCC 9039 6198319 YP_001834049.1 CDS Bind_2996 NC_010581.1 3405026 3405388 D hypothetical protein 3405026..3405388 Beijerinckia indica subsp. indica ATCC 9039 6198303 YP_001834050.1 CDS Bind_2997 NC_010581.1 3405964 3407436 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3245 putative two-component system sensor protein; integral membrane sensor signal transduction histidine kinase 3405964..3407436 Beijerinckia indica subsp. indica ATCC 9039 6198304 YP_001834051.1 CDS Bind_2998 NC_010581.1 3407421 3408803 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bra:BRADO3244 putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator; two component, sigma54 specific, Fis family transcriptional regulator 3407421..3408803 Beijerinckia indica subsp. indica ATCC 9039 6198305 YP_001834052.1 CDS Bind_3000 NC_010581.1 3409731 3410378 D KEGG: bra:BRADO3242 hypothetical protein; hypothetical protein 3409731..3410378 Beijerinckia indica subsp. indica ATCC 9039 6198297 YP_001834053.1 CDS Bind_3001 NC_010581.1 3410442 3410765 D hypothetical protein 3410442..3410765 Beijerinckia indica subsp. indica ATCC 9039 6198298 YP_001834054.1 CDS Bind_3002 NC_010581.1 3410762 3412006 D PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein; arsenical pump membrane protein 3410762..3412006 Beijerinckia indica subsp. indica ATCC 9039 6198286 YP_001834055.1 CDS Bind_3003 NC_010581.1 3412034 3412498 D KEGG: gbe:GbCGDNIH1_1401 hypothetical membrane spanning protein; hypothetical protein 3412034..3412498 Beijerinckia indica subsp. indica ATCC 9039 6198287 YP_001834056.1 CDS Bind_3004 NC_010581.1 3412491 3413762 D PFAM: major facilitator superfamily MFS_1; KEGG: bra:BRADO3241 major facilitator superfamily (MFS) transporter; major facilitator transporter 3412491..3413762 Beijerinckia indica subsp. indica ATCC 9039 6198288 YP_001834057.1 CDS Bind_3006 NC_010581.1 3420768 3421711 R KEGG: acr:Acry_3597 transposase and inactivated derivatives-like protein; transposase complement(join(3420768..3421367,3421367..3421711)) Beijerinckia indica subsp. indica ATCC 9039 6198264 YP_001834058.1 CDS Bind_3007 NC_010581.1 3421854 3422324 D PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_3906 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3421854..3422324 Beijerinckia indica subsp. indica ATCC 9039 6198265 YP_001834059.1 CDS Bind_3008 NC_010581.1 3422468 3423532 R PFAM: Patatin; KEGG: xau:Xaut_1886 patatin; patatin complement(3422468..3423532) Beijerinckia indica subsp. indica ATCC 9039 6198247 YP_001834060.1 CDS Bind_3009 NC_010581.1 3423779 3424564 R TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_6971 D-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase complement(3423779..3424564) Beijerinckia indica subsp. indica ATCC 9039 6198248 YP_001834061.1 CDS Bind_3010 NC_010581.1 3424740 3425219 D KEGG: nha:Nham_0618 putative ferric uptake regulator, FUR family; ferric uptake regulator family protein 3424740..3425219 Beijerinckia indica subsp. indica ATCC 9039 6198249 YP_001834062.1 CDS Bind_3011 NC_010581.1 3425261 3426391 R KEGG: ajs:Ajs_3068 hypothetical protein; hypothetical protein complement(3425261..3426391) Beijerinckia indica subsp. indica ATCC 9039 6198244 YP_001834063.1 CDS Bind_3012 NC_010581.1 3426476 3427702 R PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: sma:SAV101 polyketide synthase; 8-amino-7-oxononanoate synthase complement(3426476..3427702) Beijerinckia indica subsp. indica ATCC 9039 6198245 YP_001834064.1 CDS Bind_3013 NC_010581.1 3428789 3430318 D PFAM: glycosyl transferase family 20; KEGG: rle:RL0503 putative trehalose-6-phosphate synthase,glycosyltransferase; Alpha,alpha-trehalose-phosphate synthase 3428789..3430318 Beijerinckia indica subsp. indica ATCC 9039 6198246 YP_001834065.1 CDS Bind_3014 NC_010581.1 3430561 3433845 D KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 3430561..3433845 Beijerinckia indica subsp. indica ATCC 9039 6198238 YP_001834066.1 CDS Bind_3015 NC_010581.1 3433874 3436162 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_5251 histidine kinase; integral membrane sensor hybrid histidine kinase complement(3433874..3436162) Beijerinckia indica subsp. indica ATCC 9039 6198239 YP_001834067.1 CDS Bind_3016 NC_010581.1 3436461 3436670 R hypothetical protein complement(3436461..3436670) Beijerinckia indica subsp. indica ATCC 9039 6198240 YP_001834068.1 CDS Bind_3017 NC_010581.1 3436872 3437918 R KEGG: ade:Adeh_2750 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(3436872..3437918) Beijerinckia indica subsp. indica ATCC 9039 6198235 YP_001834069.1 CDS Bind_3018 NC_010581.1 3438150 3438983 R PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain protein; UspA domain-containing protein complement(3438150..3438983) Beijerinckia indica subsp. indica ATCC 9039 6198236 YP_001834070.1 CDS Bind_3019 NC_010581.1 3439175 3439558 D PFAM: PRC-barrel domain protein; KEGG: xau:Xaut_4137 PRC-barrel domain protein; PRC-barrel domain-containing protein 3439175..3439558 Beijerinckia indica subsp. indica ATCC 9039 6198237 YP_001834071.1 CDS Bind_3020 NC_010581.1 3439719 3440216 R PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20; heat shock protein Hsp20 complement(3439719..3440216) Beijerinckia indica subsp. indica ATCC 9039 6198231 YP_001834072.1 CDS Bind_3021 NC_010581.1 3440488 3441147 R PFAM: transcription activator effector binding; KEGG: bra:BRADO0382 conserved hypothetical protein; putative secreted protein; transcription activator effector binding complement(3440488..3441147) Beijerinckia indica subsp. indica ATCC 9039 6198232 YP_001834073.1 CDS Bind_3022 NC_010581.1 3441869 3442093 D KEGG: bch:Bcen2424_5289 hypothetical protein; hypothetical protein 3441869..3442093 Beijerinckia indica subsp. indica ATCC 9039 6198233 YP_001834074.1 CDS Bind_3023 NC_010581.1 3442262 3443053 D KEGG: azc:AZC_1536 hypothetical protein; hypothetical protein 3442262..3443053 Beijerinckia indica subsp. indica ATCC 9039 6198228 YP_001834075.1 CDS Bind_3024 NC_010581.1 3443308 3443757 D PFAM: protein of unknown function DUF983; KEGG: pla:Plav_2829 protein of unknown function DUF983; hypothetical protein 3443308..3443757 Beijerinckia indica subsp. indica ATCC 9039 6198229 YP_001834076.1 CDS Bind_3025 NC_010581.1 3444091 3445218 D PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator superfamily MFS_1; major facilitator transporter 3444091..3445218 Beijerinckia indica subsp. indica ATCC 9039 6198230 YP_001834077.1 CDS rpmG NC_010581.1 3445363 3445530 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3445363..3445530 Beijerinckia indica subsp. indica ATCC 9039 6198224 YP_001834078.1 CDS Bind_3027 NC_010581.1 3445630 3446382 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mex:Mext_1051 DNA repair protein RecO; DNA repair protein RecO complement(3445630..3446382) Beijerinckia indica subsp. indica ATCC 9039 6198225 YP_001834079.1 CDS Bind_3028 NC_010581.1 3446399 3447373 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: azc:AZC_1999 quinone oxidoreductase; alcohol dehydrogenase complement(3446399..3447373) Beijerinckia indica subsp. indica ATCC 9039 6198226 YP_001834080.1 CDS Bind_3029 NC_010581.1 3447401 3448474 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpb:RPB_4433 threonine aldolase; threonine aldolase complement(3447401..3448474) Beijerinckia indica subsp. indica ATCC 9039 6198218 YP_001834081.1 CDS Bind_3030 NC_010581.1 3448585 3449205 R hypothetical protein complement(3448585..3449205) Beijerinckia indica subsp. indica ATCC 9039 6198219 YP_001834082.1 CDS Bind_3031 NC_010581.1 3449420 3454081 D PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); glutamate synthase 3449420..3454081 Beijerinckia indica subsp. indica ATCC 9039 6198220 YP_001834083.1 CDS gltD NC_010581.1 3454220 3455638 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3454220..3455638 Beijerinckia indica subsp. indica ATCC 9039 6198141 YP_001834084.1 CDS Bind_3033 NC_010581.1 3455911 3456837 D PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase, family 2; glycosyl transferase family protein 3455911..3456837 Beijerinckia indica subsp. indica ATCC 9039 6198142 YP_001834085.1 CDS Bind_3034 NC_010581.1 3456954 3457184 R hypothetical protein complement(3456954..3457184) Beijerinckia indica subsp. indica ATCC 9039 6198143 YP_001834086.1 CDS Bind_3035 NC_010581.1 3457454 3457663 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1893 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein complement(3457454..3457663) Beijerinckia indica subsp. indica ATCC 9039 6198148 YP_001834087.1 CDS Bind_3036 NC_010581.1 3457995 3458684 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nha:Nham_0696 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase complement(3457995..3458684) Beijerinckia indica subsp. indica ATCC 9039 6198149 YP_001834088.1 CDS mnmA NC_010581.1 3458687 3459982 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3458687..3459982) Beijerinckia indica subsp. indica ATCC 9039 6198150 YP_001834089.1 CDS Bind_3038 NC_010581.1 3460599 3460874 D PFAM: protein of unknown function DUF1153; KEGG: rpe:RPE_0964 protein of unknown function DUF1153; hypothetical protein 3460599..3460874 Beijerinckia indica subsp. indica ATCC 9039 6198210 YP_001834090.1 CDS Bind_3039 NC_010581.1 3460969 3462003 R KEGG: mex:Mext_0821 hypothetical protein; hypothetical protein complement(3460969..3462003) Beijerinckia indica subsp. indica ATCC 9039 6198211 YP_001834091.1 CDS Bind_3040 NC_010581.1 3462716 3464191 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rpc:RPC_3720 leucyl aminopeptidase; leucyl aminopeptidase 3462716..3464191 Beijerinckia indica subsp. indica ATCC 9039 6198212 YP_001834092.1 CDS Bind_3041 NC_010581.1 3464205 3465071 D PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein; NLP/P60 protein 3464205..3465071 Beijerinckia indica subsp. indica ATCC 9039 6198204 YP_001834093.1 CDS rpmI NC_010581.1 3465258 3465458 D PFAM: ribosomal protein L35; KEGG: bbt:BBta_0216 50S ribosomal protein L35; 50S ribosomal protein L35 3465258..3465458 Beijerinckia indica subsp. indica ATCC 9039 6198205 YP_001834094.1 CDS rplT NC_010581.1 3465504 3465869 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3465504..3465869 Beijerinckia indica subsp. indica ATCC 9039 6198206 YP_001834095.1 CDS Bind_3044 NC_010581.1 3466894 3467637 D KEGG: afm:AFUA_1G10012 conserved hypothetical protein; hypothetical protein 3466894..3467637 Beijerinckia indica subsp. indica ATCC 9039 6198199 YP_001834096.1 CDS Bind_3045 NC_010581.1 3468068 3468595 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: cak:Caul_2070 carbohydrate kinase, thermoresistant glucokinase family; carbohydrate kinase complement(3468068..3468595) Beijerinckia indica subsp. indica ATCC 9039 6198200 YP_001834097.1 CDS Bind_3046 NC_010581.1 3468592 3470754 R KEGG: rpe:RPE_0224 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein complement(3468592..3470754) Beijerinckia indica subsp. indica ATCC 9039 6198201 YP_001834098.1 CDS Bind_3047 NC_010581.1 3470971 3472086 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3470971..3472086 Beijerinckia indica subsp. indica ATCC 9039 6198196 YP_001834099.1 CDS Bind_3048 NC_010581.1 3472182 3472532 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pau:PA14_58210 putative RplA family protein; rare lipoprotein A complement(3472182..3472532) Beijerinckia indica subsp. indica ATCC 9039 6198197 YP_001834100.1 CDS Bind_3049 NC_010581.1 3472816 3474075 D KEGG: oan:Oant_1728 hypothetical protein; hypothetical protein 3472816..3474075 Beijerinckia indica subsp. indica ATCC 9039 6198198 YP_001834101.1 CDS Bind_3050 NC_010581.1 3474086 3474760 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: oan:Oant_1727 methyltransferase type 12; type 12 methyltransferase 3474086..3474760 Beijerinckia indica subsp. indica ATCC 9039 6198191 YP_001834102.1 CDS Bind_3051 NC_010581.1 3474950 3475909 R PFAM: protein of unknown function DUF403; KEGG: bra:BRADO2904 hypothetical protein; hypothetical protein complement(3474950..3475909) Beijerinckia indica subsp. indica ATCC 9039 6198192 YP_001834103.1 CDS Bind_3052 NC_010581.1 3476203 3477651 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpd:RPD_2240 protein of unknown function DUF404; hypothetical protein complement(3476203..3477651) Beijerinckia indica subsp. indica ATCC 9039 6198193 YP_001834104.1 CDS Bind_3053 NC_010581.1 3478043 3478183 D hypothetical protein 3478043..3478183 Beijerinckia indica subsp. indica ATCC 9039 6201764 YP_001834105.1 CDS Bind_3054 NC_010581.1 3478275 3478814 D PFAM: beta-Ig-H3/fasciclin; KEGG: mex:Mext_3627 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 3478275..3478814 Beijerinckia indica subsp. indica ATCC 9039 6201765 YP_001834106.1 CDS Bind_3055 NC_010581.1 3479023 3480321 D PFAM: protein of unknown function DUF459; KEGG: mex:Mext_3271 protein of unknown function DUF459; hypothetical protein 3479023..3480321 Beijerinckia indica subsp. indica ATCC 9039 6201766 YP_001834107.1 CDS Bind_3056 NC_010581.1 3480550 3481272 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_1194 ErfK/YbiS/YcfS/YnhG precursor; ErfK/YbiS/YcfS/YnhG family protein 3480550..3481272 Beijerinckia indica subsp. indica ATCC 9039 6198138 YP_001834108.1 CDS Bind_3057 NC_010581.1 3481837 3482286 D PFAM: DoxX family protein; KEGG: gdi:GDI1220 hypothetical protein; DoxX family protein 3481837..3482286 Beijerinckia indica subsp. indica ATCC 9039 6198139 YP_001834109.1 CDS Bind_3058 NC_010581.1 3482479 3483663 R KEGG: azc:AZC_3903 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3482479..3483663) Beijerinckia indica subsp. indica ATCC 9039 6198140 YP_001834110.1 CDS Bind_3059 NC_010581.1 3484342 3491505 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: nha:Nham_0725 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 3484342..3491505 Beijerinckia indica subsp. indica ATCC 9039 6198177 YP_001834111.1 CDS Bind_3060 NC_010581.1 3491600 3493372 D PFAM: surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: nha:Nham_0727 hemolysin activation/secretion protein-like; polypeptide-transport-associated domain-containing protein 3491600..3493372 Beijerinckia indica subsp. indica ATCC 9039 6198178 YP_001834112.1 CDS Bind_3061 NC_010581.1 3493428 3493856 D TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: nha:Nham_0728 MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 3493428..3493856 Beijerinckia indica subsp. indica ATCC 9039 6198179 YP_001834113.1 CDS Bind_3062 NC_010581.1 3493849 3494232 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: xau:Xaut_2279 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3493849..3494232 Beijerinckia indica subsp. indica ATCC 9039 6201862 YP_001834114.1 CDS Bind_3063 NC_010581.1 3494237 3495031 D TIGRFAM: TonB family protein; KEGG: nha:Nham_0730 TonB-like; TonB family protein 3494237..3495031 Beijerinckia indica subsp. indica ATCC 9039 6201863 YP_001834115.1 CDS Bind_3064 NC_010581.1 3495080 3495991 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2987 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3495080..3495991 Beijerinckia indica subsp. indica ATCC 9039 6201864 YP_001834116.1 CDS Bind_3065 NC_010581.1 3496542 3498746 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_2672 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3496542..3498746 Beijerinckia indica subsp. indica ATCC 9039 6198159 YP_001834117.1 CDS Bind_3066 NC_010581.1 3499417 3500361 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: rpe:RPE_0764 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 3499417..3500361 Beijerinckia indica subsp. indica ATCC 9039 6198160 YP_001834118.1 CDS Bind_3067 NC_010581.1 3500646 3503057 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpe:RPE_2669 general secretion pathway protein D; general secretion pathway protein D 3500646..3503057 Beijerinckia indica subsp. indica ATCC 9039 6198161 YP_001834119.1 CDS Bind_3069 NC_010581.1 3503392 3504612 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:blr6437 gluconolactonase precursor; SMP-30/gluconolaconase/LRE domain-containing protein complement(3503392..3504612) Beijerinckia indica subsp. indica ATCC 9039 6198152 YP_001834120.1 CDS Bind_3070 NC_010581.1 3504786 3506153 R PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB complement(3504786..3506153) Beijerinckia indica subsp. indica ATCC 9039 6198153 YP_001834121.1 CDS Bind_3071 NC_010581.1 3506413 3507342 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(3506413..3507342) Beijerinckia indica subsp. indica ATCC 9039 6201473 YP_001834122.1 CDS Bind_3072 NC_010581.1 3507538 3508728 R PFAM: inner-membrane translocator; KEGG: bra:BRADO1819 putative L-arabinose transport system permease protein AraH; monosaccharide-transporting ATPase complement(3507538..3508728) Beijerinckia indica subsp. indica ATCC 9039 6201474 YP_001834123.1 CDS Bind_3073 NC_010581.1 3508725 3510260 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3209 sugar ABC transporter ATP-binding protein; ABC transporter-like protein complement(3508725..3510260) Beijerinckia indica subsp. indica ATCC 9039 6201475 YP_001834124.1 CDS Bind_3074 NC_010581.1 3510334 3511398 R KEGG: bbt:BBta_2137 multiple sugar-binding periplasmic receptor ChvE precursor; multiple sugar-binding periplasmic receptor ChvE complement(3510334..3511398) Beijerinckia indica subsp. indica ATCC 9039 6201504 YP_001834125.1 CDS Bind_3075 NC_010581.1 3511679 3512611 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bbt:BBta_2136 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein complement(3511679..3512611) Beijerinckia indica subsp. indica ATCC 9039 6201505 YP_001834126.1 CDS Bind_3076 NC_010581.1 3512645 3513733 R PFAM: Aldose 1-epimerase; KEGG: xau:Xaut_1020 aldose 1-epimerase; aldose 1-epimerase complement(3512645..3513733) Beijerinckia indica subsp. indica ATCC 9039 6201506 YP_001834127.1 CDS Bind_3077 NC_010581.1 3513736 3514707 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3205 dehydrogenase; galactose 1-dehydrogenase complement(3513736..3514707) Beijerinckia indica subsp. indica ATCC 9039 6201491 YP_001834128.1 CDS Bind_3078 NC_010581.1 3514704 3516290 R PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RS05368 probable ketoglutarate semialdehyde dehydrogenase protein; aldehyde dehydrogenase complement(3514704..3516290) Beijerinckia indica subsp. indica ATCC 9039 6201492 YP_001834129.1 CDS Bind_3079 NC_010581.1 3516296 3517669 R PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4924 major facilitator superfamily MFS_1; major facilitator transporter complement(3516296..3517669) Beijerinckia indica subsp. indica ATCC 9039 6201493 YP_001834130.1 CDS Bind_3080 NC_010581.1 3517749 3518681 R PFAM: dihydrodipicolinate synthetase; KEGG: xau:Xaut_1021 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(3517749..3518681) Beijerinckia indica subsp. indica ATCC 9039 6199604 YP_001834131.1 CDS Bind_3081 NC_010581.1 3518691 3520427 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(3518691..3520427) Beijerinckia indica subsp. indica ATCC 9039 6199605 YP_001834132.1 CDS Bind_3082 NC_010581.1 3520444 3521169 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bra:BRADO1811 putative transcriptional regulatory protein, GntR family; GntR family transcriptional regulator complement(3520444..3521169) Beijerinckia indica subsp. indica ATCC 9039 6199606 YP_001834133.1 CDS Bind_3083 NC_010581.1 3521295 3521525 R KEGG: bja:blr3200 ABC transporter sugar-binding protein; sugar ABC transporter substrate-binding protein complement(3521295..3521525) Beijerinckia indica subsp. indica ATCC 9039 6201219 YP_001834134.1 CDS Bind_3084 NC_010581.1 3521825 3522226 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_4871 putative ferrodoxin; 4Fe-4S ferredoxin complement(3521825..3522226) Beijerinckia indica subsp. indica ATCC 9039 6201220 YP_001834135.1 CDS Bind_3085 NC_010581.1 3522223 3523803 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_3287 putative oxidoreductase (AsfA-like), putative L-aspartate oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(3522223..3523803) Beijerinckia indica subsp. indica ATCC 9039 6201221 YP_001834136.1 CDS Bind_3086 NC_010581.1 3524283 3525155 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: fre:Franean1_2520 taurine dioxygenase; taurine dioxygenase 3524283..3525155 Beijerinckia indica subsp. indica ATCC 9039 6198814 YP_001834137.1 CDS Bind_3087 NC_010581.1 3525177 3526241 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: swi:Swit_2508 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 3525177..3526241 Beijerinckia indica subsp. indica ATCC 9039 6198815 YP_001834138.1 CDS Bind_3088 NC_010581.1 3526295 3528802 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 3526295..3528802 Beijerinckia indica subsp. indica ATCC 9039 6198816 YP_001834139.1 CDS Bind_3089 NC_010581.1 3529892 3530512 D PFAM: protein of unknown function DUF938; KEGG: bam:Bamb_3284 protein of unknown function DUF938; hypothetical protein 3529892..3530512 Beijerinckia indica subsp. indica ATCC 9039 6200052 YP_001834140.1 CDS Bind_3090 NC_010581.1 3530519 3532246 R PFAM: HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_3300 PAS sensor protein; signal transduction histidine kinase complement(3530519..3532246) Beijerinckia indica subsp. indica ATCC 9039 6200153 YP_001834141.1 CDS Bind_3091 NC_010581.1 3532601 3533881 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr7329 putative multidrug resistance protein; RND family efflux transporter MFP subunit 3532601..3533881 Beijerinckia indica subsp. indica ATCC 9039 6200154 YP_001834142.1 CDS Bind_3092 NC_010581.1 3533943 3537113 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3533943..3537113 Beijerinckia indica subsp. indica ATCC 9039 6200155 YP_001834143.1 CDS Bind_3093 NC_010581.1 3537116 3538384 D TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: psa:PST_3772 membrane-bound lytic murein transglycosylase, putative; lytic murein transglycosylase 3537116..3538384 Beijerinckia indica subsp. indica ATCC 9039 6200714 YP_001834144.1 CDS Bind_3094 NC_010581.1 3538486 3538779 R hypothetical protein complement(3538486..3538779) Beijerinckia indica subsp. indica ATCC 9039 6200715 YP_001834145.1 CDS Bind_3095 NC_010581.1 3539168 3540763 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: azc:AZC_2763 pyruvate phosphate dikinase; pyruvate phosphate dikinase complement(3539168..3540763) Beijerinckia indica subsp. indica ATCC 9039 6200716 YP_001834146.1 CDS Bind_3096 NC_010581.1 3540795 3542738 R KEGG: bbt:BBta_2339 hypothetical protein; hypothetical protein complement(3540795..3542738) Beijerinckia indica subsp. indica ATCC 9039 6199505 YP_001834147.1 CDS Bind_3097 NC_010581.1 3543036 3544910 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bja:bll7291 transcriptional regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator complement(3543036..3544910) Beijerinckia indica subsp. indica ATCC 9039 6199506 YP_001834148.1 CDS Bind_3098 NC_010581.1 3545356 3545565 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 3545356..3545565 Beijerinckia indica subsp. indica ATCC 9039 6199507 YP_001834149.1 CDS Bind_3099 NC_010581.1 3545670 3546086 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dsh:Dshi_0827 cytidine deaminase; cytidine deaminase complement(3545670..3546086) Beijerinckia indica subsp. indica ATCC 9039 6198181 YP_001834150.1 CDS Bind_3100 NC_010581.1 3546302 3546514 D KEGG: rru:Rru_A3018 hypothetical protein; hypothetical protein 3546302..3546514 Beijerinckia indica subsp. indica ATCC 9039 6198182 YP_001834151.1 CDS Bind_3101 NC_010581.1 3546652 3546948 R KEGG: azc:AZC_4179 hypothetical protein; hypothetical protein complement(3546652..3546948) Beijerinckia indica subsp. indica ATCC 9039 6198183 YP_001834152.1 CDS Bind_3102 NC_010581.1 3547911 3548789 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rpa:RPA4748 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 3547911..3548789 Beijerinckia indica subsp. indica ATCC 9039 6200639 YP_001834153.1 CDS Bind_3103 NC_010581.1 3549103 3549672 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: azc:AZC_0369 HNH endonuclease; HNH endonuclease 3549103..3549672 Beijerinckia indica subsp. indica ATCC 9039 6200640 YP_001834154.1 CDS Bind_3104 NC_010581.1 3550261 3552567 R KEGG: bur:Bcep18194_B0123 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific complement(3550261..3552567) Beijerinckia indica subsp. indica ATCC 9039 6200641 YP_001834155.1 CDS Bind_3105 NC_010581.1 3553349 3553735 D hypothetical protein 3553349..3553735 Beijerinckia indica subsp. indica ATCC 9039 6198261 YP_001834156.1 CDS Bind_3106 NC_010581.1 3553695 3554453 R KEGG: mes:Meso_3567 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III complement(3553695..3554453) Beijerinckia indica subsp. indica ATCC 9039 6198262 YP_001834157.1 CDS Bind_3107 NC_010581.1 3554664 3555212 D KEGG: bja:bll0688 hypothetical protein; hypothetical protein 3554664..3555212 Beijerinckia indica subsp. indica ATCC 9039 6198263 YP_001834158.1 CDS Bind_3108 NC_010581.1 3555318 3555584 R hypothetical protein complement(3555318..3555584) Beijerinckia indica subsp. indica ATCC 9039 6198344 YP_001834159.1 CDS Bind_3109 NC_010581.1 3555785 3556906 R KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(3555785..3556906) Beijerinckia indica subsp. indica ATCC 9039 6198345 YP_001834160.1 CDS Bind_3110 NC_010581.1 3557075 3557506 R PFAM: FxsA cytoplasmic membrane protein; KEGG: pfo:Pfl_4503 FxsA; FxsA cytoplasmic membrane protein complement(3557075..3557506) Beijerinckia indica subsp. indica ATCC 9039 6198346 YP_001834161.1 CDS Bind_3111 NC_010581.1 3557819 3558601 D PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 3557819..3558601 Beijerinckia indica subsp. indica ATCC 9039 6198322 YP_001834162.1 CDS Bind_3112 NC_010581.1 3558728 3559876 D PFAM: MltA domain protein; 3D domain protein; KEGG: azc:AZC_4601 membrane-bound lytic murein transglycosylase; MltA domain-containing protein 3558728..3559876 Beijerinckia indica subsp. indica ATCC 9039 6198323 YP_001834163.1 CDS Bind_3113 NC_010581.1 3559873 3560508 D PFAM: Smr protein/MutS2; KEGG: rpc:RPC_0301 Smr protein/MutS2; Smr protein/MutS2 3559873..3560508 Beijerinckia indica subsp. indica ATCC 9039 6198324 YP_001834164.1 CDS Bind_3114 NC_010581.1 3560505 3560867 D PFAM: helix-turn-helix domain protein; KEGG: rle:RL0011 putative transcriptional regulator; XRE family transcriptional regulator 3560505..3560867 Beijerinckia indica subsp. indica ATCC 9039 6198314 YP_001834165.1 CDS Bind_3115 NC_010581.1 3560890 3561306 D PFAM: protein of unknown function DUF1025; KEGG: mex:Mext_2340 protein of unknown function DUF1025; hypothetical protein 3560890..3561306 Beijerinckia indica subsp. indica ATCC 9039 6198315 YP_001834166.1 CDS Bind_3116 NC_010581.1 3561313 3562320 R SMART: WD-40 repeat protein; KEGG: mex:Mext_2336 WD-40 repeat protein; WD-40 repeat-containing protein complement(3561313..3562320) Beijerinckia indica subsp. indica ATCC 9039 6198316 YP_001834167.1 CDS Bind_3117 NC_010581.1 3562519 3562860 R TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: atc:AGR_C_3401 conserved hypothetical protein NMB0773; glutaredoxin-like protein complement(3562519..3562860) Beijerinckia indica subsp. indica ATCC 9039 6198375 YP_001834168.1 CDS Bind_3118 NC_010581.1 3563002 3563235 R PFAM: BolA family protein; KEGG: azc:AZC_2232 BolA-like protein; BolA family protein complement(3563002..3563235) Beijerinckia indica subsp. indica ATCC 9039 6198376 YP_001834169.1 CDS Bind_3119 NC_010581.1 3563497 3565707 R TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bra:BRADO2785 phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase II complement(3563497..3565707) Beijerinckia indica subsp. indica ATCC 9039 6198377 YP_001834170.1 CDS Bind_3120 NC_010581.1 3565709 3566407 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(3565709..3566407) Beijerinckia indica subsp. indica ATCC 9039 6200838 YP_001834171.1 CDS Bind_3121 NC_010581.1 3566529 3566777 R TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: rpd:RPD_1748 phosphoribosylformylglycinamidine synthase subunit PurS; phosphoribosylformylglycinamidine synthase PurS complement(3566529..3566777) Beijerinckia indica subsp. indica ATCC 9039 6200839 YP_001834172.1 CDS Bind_3122 NC_010581.1 3566861 3567655 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3566861..3567655) Beijerinckia indica subsp. indica ATCC 9039 6200840 YP_001834173.1 CDS Bind_3123 NC_010581.1 3568293 3568667 D PFAM: protein of unknown function DUF1476; KEGG: pla:Plav_2590 protein of unknown function DUF1476; hypothetical protein 3568293..3568667 Beijerinckia indica subsp. indica ATCC 9039 6198293 YP_001834174.1 CDS Bind_3124 NC_010581.1 3568723 3569694 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bbt:BBta_0401 site-specific tyrosine recombinase XerC; integrase family protein 3568723..3569694 Beijerinckia indica subsp. indica ATCC 9039 6198294 YP_001834175.1 CDS Bind_3125 NC_010581.1 3569863 3571713 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3569863..3571713 Beijerinckia indica subsp. indica ATCC 9039 6198295 YP_001834176.1 CDS Bind_3126 NC_010581.1 3571715 3572659 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3571715..3572659 Beijerinckia indica subsp. indica ATCC 9039 6198280 YP_001834177.1 CDS Bind_3127 NC_010581.1 3572656 3575517 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3572656..3575517 Beijerinckia indica subsp. indica ATCC 9039 6198281 YP_001834178.1 CDS Bind_3128 NC_010581.1 3575585 3576085 R PFAM: DoxX family protein; KEGG: azc:AZC_3487 DoxX family protein; DoxX family protein complement(3575585..3576085) Beijerinckia indica subsp. indica ATCC 9039 6198282 YP_001834179.1 CDS Bind_3129 NC_010581.1 3576096 3576863 R KEGG: azc:AZC_3486 hypothetical protein; hypothetical protein complement(3576096..3576863) Beijerinckia indica subsp. indica ATCC 9039 6198221 YP_001834180.1 CDS Bind_3130 NC_010581.1 3576875 3577753 R PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: azc:AZC_3485 hypothetical protein; hypothetical protein complement(3576875..3577753) Beijerinckia indica subsp. indica ATCC 9039 6198222 YP_001834181.1 CDS Bind_3131 NC_010581.1 3577870 3578166 R KEGG: bbt:BBta_3391 hypothetical protein; hypothetical protein complement(3577870..3578166) Beijerinckia indica subsp. indica ATCC 9039 6198223 YP_001834182.1 CDS Bind_3132 NC_010581.1 3578241 3578492 R KEGG: azc:AZC_3484 hypothetical protein; hypothetical protein complement(3578241..3578492) Beijerinckia indica subsp. indica ATCC 9039 6198145 YP_001834183.1 CDS Bind_3133 NC_010581.1 3578659 3579231 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3578659..3579231 Beijerinckia indica subsp. indica ATCC 9039 6198146 YP_001834184.1 CDS Bind_3134 NC_010581.1 3579228 3579860 D PFAM: protein of unknown function DUF1109; KEGG: rpe:RPE_1945 protein of unknown function DUF1109; hypothetical protein 3579228..3579860 Beijerinckia indica subsp. indica ATCC 9039 6198147 YP_001834185.1 CDS Bind_3135 NC_010581.1 3579916 3580215 D PFAM: RNA-binding S4 domain protein; KEGG: mes:Meso_3377 RNA-binding S4; RNA-binding S4 domain-containing protein 3579916..3580215 Beijerinckia indica subsp. indica ATCC 9039 6198156 YP_001834186.1 CDS Bind_3136 NC_010581.1 3580640 3580978 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rpa:RPA0489 ferredoxin II; 4Fe-4S ferredoxin 3580640..3580978 Beijerinckia indica subsp. indica ATCC 9039 6198157 YP_001834187.1 CDS Bind_3137 NC_010581.1 3581587 3581727 D hypothetical protein 3581587..3581727 Beijerinckia indica subsp. indica ATCC 9039 6198158 YP_001834188.1 CDS Bind_3138 NC_010581.1 3581907 3583013 D PFAM: transcription factor CarD; KEGG: rpc:RPC_0548 transcriptional regulator, CarD family; CarD family transcriptional regulator 3581907..3583013 Beijerinckia indica subsp. indica ATCC 9039 6201790 YP_001834189.1 CDS Bind_3139 NC_010581.1 3583245 3584222 D KEGG: rpb:RPB_3347 phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB, PSPase-like; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3583245..3584222 Beijerinckia indica subsp. indica ATCC 9039 6201791 YP_001834190.1 CDS Bind_3140 NC_010581.1 3584246 3585022 D PFAM: LamB/YcsF family protein; KEGG: rpa:RPA2681 hypothetical protein; LamB/YcsF family protein 3584246..3585022 Beijerinckia indica subsp. indica ATCC 9039 6201792 YP_001834191.1 CDS Bind_3141 NC_010581.1 3585019 3585738 D PFAM: Allophanate hydrolase subunit 1; KEGG: azc:AZC_4073 putative allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3585019..3585738 Beijerinckia indica subsp. indica ATCC 9039 6201382 YP_001834192.1 CDS Bind_3142 NC_010581.1 3585735 3586778 D TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: xau:Xaut_1495 UreA amidolyase related protein; urea amidolyase-like protein 3585735..3586778 Beijerinckia indica subsp. indica ATCC 9039 6201383 YP_001834193.1 CDS Bind_3143 NC_010581.1 3586769 3587137 R KEGG: bvi:Bcep1808_3111 flagellar basal body P-ring biosynthesis protein FlgA; flagellar basal body P-ring biosynthesis protein FlgA complement(3586769..3587137) Beijerinckia indica subsp. indica ATCC 9039 6201384 YP_001834194.1 CDS Bind_3144 NC_010581.1 3587482 3587940 R KEGG: nha:Nham_2175 hypothetical protein; hypothetical protein complement(3587482..3587940) Beijerinckia indica subsp. indica ATCC 9039 6199976 YP_001834195.1 CDS Bind_3145 NC_010581.1 3588423 3589115 R KEGG: nve:NEMVE_v1g222393 hypothetical protein Pfam: 7tm_1 OPT DUF486 ThiG ABC2_membrane PMT Coat_X Voltage_CLC DUF81 BPD_transp_2 DUF125 PROSITE: G_PROTEIN_RECEP_F1_1 HEXAPEP_TRANSFERASES ALA_RICH GLY_RICH VAL_RICH G_PROTEIN_RECEP_F1_2; hypothetical protein complement(3588423..3589115) Beijerinckia indica subsp. indica ATCC 9039 6199977 YP_001834196.1 CDS Bind_3146 NC_010581.1 3589413 3590624 R TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: mex:Mext_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF complement(3589413..3590624) Beijerinckia indica subsp. indica ATCC 9039 6199978 YP_001834197.1 CDS Bind_3147 NC_010581.1 3590772 3591239 D PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3590772..3591239 Beijerinckia indica subsp. indica ATCC 9039 6200910 YP_001834198.1 CDS Bind_3148 NC_010581.1 3591206 3591685 D hypothetical protein 3591206..3591685 Beijerinckia indica subsp. indica ATCC 9039 6200911 YP_001834199.1 CDS Bind_3149 NC_010581.1 3591915 3592379 R PFAM: ferredoxin; KEGG: mca:MCA0232 ferredoxin, 2Fe-2S; ferredoxin complement(3591915..3592379) Beijerinckia indica subsp. indica ATCC 9039 6200912 YP_001834200.1 CDS Bind_3150 NC_010581.1 3593146 3593505 D KEGG: mex:Mext_0048 hypothetical protein; hypothetical protein 3593146..3593505 Beijerinckia indica subsp. indica ATCC 9039 6201843 YP_001834201.1 CDS Bind_3151 NC_010581.1 3593685 3595544 R KEGG: rpa:RPA0919 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein complement(3593685..3595544) Beijerinckia indica subsp. indica ATCC 9039 6201844 YP_001834202.1 CDS Bind_3152 NC_010581.1 3596406 3597428 D TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_B0022 hypothetical protein; hopanoid-associated sugar epimerase 3596406..3597428 Beijerinckia indica subsp. indica ATCC 9039 6201845 YP_001834203.1 CDS Bind_3153 NC_010581.1 3597425 3598321 D TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: bja:blr3001 hypothetical protein; squalene synthase 3597425..3598321 Beijerinckia indica subsp. indica ATCC 9039 6201452 YP_001834204.1 CDS Bind_3154 NC_010581.1 3598324 3599181 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bpd:BURPS668_A3277 squalene/phytoene synthase family protein; squalene synthase 3598324..3599181 Beijerinckia indica subsp. indica ATCC 9039 6201453 YP_001834205.1 CDS Bind_3155 NC_010581.1 3599181 3600428 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase 3599181..3600428 Beijerinckia indica subsp. indica ATCC 9039 6201454 YP_001834206.1 CDS Bind_3156 NC_010581.1 3600459 3602447 D KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3600459..3602447 Beijerinckia indica subsp. indica ATCC 9039 6201551 YP_001834207.1 CDS Bind_3157 NC_010581.1 3602451 3603116 D KEGG: bma:BMAA2099 hypothetical protein; hypothetical protein 3602451..3603116 Beijerinckia indica subsp. indica ATCC 9039 6201552 YP_001834208.1 CDS Bind_3158 NC_010581.1 3603126 3604274 R TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: reh:H16_B2170 predicted Fe-S oxidoreductase; hopanoid biosynthesis associated radical SAM protein HpnH complement(3603126..3604274) Beijerinckia indica subsp. indica ATCC 9039 6201553 YP_001834209.1 CDS Bind_3159 NC_010581.1 3605311 3607974 D TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: rpd:RPD_3569 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN 3605311..3607974 Beijerinckia indica subsp. indica ATCC 9039 6201379 YP_001834210.1 CDS Bind_3160 NC_010581.1 3608055 3609599 R PFAM: peptidase M48 Ste24p; KEGG: azc:AZC_3720 putative peptidase M48 protein; peptidase M48 Ste24p complement(3608055..3609599) Beijerinckia indica subsp. indica ATCC 9039 6201380 YP_001834211.1 CDS Bind_3161 NC_010581.1 3609603 3610457 R PFAM: nuclease (SNase domain protein); KEGG: bja:blr0145 hypothetical protein; nuclease complement(3609603..3610457) Beijerinckia indica subsp. indica ATCC 9039 6201381 YP_001834212.1 CDS Bind_3162 NC_010581.1 3610921 3611352 R KEGG: oan:Oant_0883 hypothetical protein; hypothetical protein complement(3610921..3611352) Beijerinckia indica subsp. indica ATCC 9039 6200157 YP_001834213.1 CDS Bind_3163 NC_010581.1 3611760 3612044 D hypothetical protein 3611760..3612044 Beijerinckia indica subsp. indica ATCC 9039 6200293 YP_001834214.1 CDS Bind_3164 NC_010581.1 3612041 3612415 D hypothetical protein 3612041..3612415 Beijerinckia indica subsp. indica ATCC 9039 6200294 YP_001834215.1 CDS Bind_3165 NC_010581.1 3612412 3612801 D PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pna:Pnap_4720 hypothetical protein; single-strand binding protein/primosomal replication protein n 3612412..3612801 Beijerinckia indica subsp. indica ATCC 9039 6200295 YP_001834216.1 CDS Bind_3166 NC_010581.1 3612813 3614810 D KEGG: nwi:Nwi_1486 RecA-family ATPase; ATPase-like protein 3612813..3614810 Beijerinckia indica subsp. indica ATCC 9039 6201322 YP_001834217.1 CDS Bind_3167 NC_010581.1 3615229 3615756 D hypothetical protein 3615229..3615756 Beijerinckia indica subsp. indica ATCC 9039 6201323 YP_001834218.1 CDS Bind_3168 NC_010581.1 3616121 3616429 D hypothetical protein 3616121..3616429 Beijerinckia indica subsp. indica ATCC 9039 6201324 YP_001834219.1 CDS Bind_3169 NC_010581.1 3616431 3617219 D KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein; hypothetical protein 3616431..3617219 Beijerinckia indica subsp. indica ATCC 9039 6198677 YP_001834220.1 CDS Bind_3170 NC_010581.1 3617404 3617781 D KEGG: azc:AZC_2164 hypothetical protein; hypothetical protein 3617404..3617781 Beijerinckia indica subsp. indica ATCC 9039 6198678 YP_001834221.1 CDS Bind_3172 NC_010581.1 3620114 3620512 D KEGG: vha:VIBHAR_01981 hypothetical protein; hypothetical protein 3620114..3620512 Beijerinckia indica subsp. indica ATCC 9039 6199138 YP_001834222.1 CDS Bind_3173 NC_010581.1 3620718 3621200 D KEGG: oan:Oant_1534 hypothetical protein; hypothetical protein 3620718..3621200 Beijerinckia indica subsp. indica ATCC 9039 6199139 YP_001834223.1 CDS Bind_3174 NC_010581.1 3621294 3621572 R PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1487 helix-turn-helix domain protein; XRE family transcriptional regulator complement(3621294..3621572) Beijerinckia indica subsp. indica ATCC 9039 6199140 YP_001834224.1 CDS Bind_3175 NC_010581.1 3621646 3621951 R KEGG: btr:Btr_0514 hypothetical protein; hypothetical protein complement(3621646..3621951) Beijerinckia indica subsp. indica ATCC 9039 6198401 YP_001834225.1 CDS Bind_3176 NC_010581.1 3621935 3622192 R KEGG: azc:AZC_4142 hypothetical protein; hypothetical protein complement(3621935..3622192) Beijerinckia indica subsp. indica ATCC 9039 6198402 YP_001834226.1 CDS Bind_3177 NC_010581.1 3622541 3622978 R KEGG: rpc:RPC_1461 hypothetical protein; hypothetical protein complement(3622541..3622978) Beijerinckia indica subsp. indica ATCC 9039 6198403 YP_001834227.1 CDS Bind_3178 NC_010581.1 3622968 3623249 R hypothetical protein complement(3622968..3623249) Beijerinckia indica subsp. indica ATCC 9039 6199183 YP_001834228.1 CDS Bind_3179 NC_010581.1 3623363 3623602 R hypothetical protein complement(3623363..3623602) Beijerinckia indica subsp. indica ATCC 9039 6199184 YP_001834229.1 CDS Bind_3180 NC_010581.1 3623757 3624821 R hypothetical protein complement(3623757..3624821) Beijerinckia indica subsp. indica ATCC 9039 6199185 YP_001834230.1 CDS Bind_3181 NC_010581.1 3625485 3626039 R hypothetical protein complement(3625485..3626039) Beijerinckia indica subsp. indica ATCC 9039 6199362 YP_001834231.1 CDS Bind_3182 NC_010581.1 3626410 3627063 R KEGG: rle:pRL110239 hypothetical protein; XRE family transcriptional regulator complement(3626410..3627063) Beijerinckia indica subsp. indica ATCC 9039 6199363 YP_001834232.1 CDS Bind_3183 NC_010581.1 3627175 3627612 D KEGG: mlo:mlr4044 hypothetical protein; hypothetical protein 3627175..3627612 Beijerinckia indica subsp. indica ATCC 9039 6199364 YP_001834233.1 CDS Bind_3184 NC_010581.1 3627609 3628013 D KEGG: xau:Xaut_3424 hypothetical protein; hypothetical protein 3627609..3628013 Beijerinckia indica subsp. indica ATCC 9039 6198458 YP_001834234.1 CDS Bind_3185 NC_010581.1 3628016 3628300 D hypothetical protein 3628016..3628300 Beijerinckia indica subsp. indica ATCC 9039 6198459 YP_001834235.1 CDS Bind_3186 NC_010581.1 3628293 3628496 D hypothetical protein 3628293..3628496 Beijerinckia indica subsp. indica ATCC 9039 6198460 YP_001834236.1 CDS Bind_3187 NC_010581.1 3628489 3628707 D hypothetical protein 3628489..3628707 Beijerinckia indica subsp. indica ATCC 9039 6198444 YP_001834237.1 CDS Bind_3188 NC_010581.1 3628700 3628897 D hypothetical protein 3628700..3628897 Beijerinckia indica subsp. indica ATCC 9039 6198445 YP_001834238.1 CDS Bind_3189 NC_010581.1 3628935 3629714 D KEGG: oan:Oant_0882 phage integrase family protein; phage integrase family protein 3628935..3629714 Beijerinckia indica subsp. indica ATCC 9039 6198446 YP_001834239.1 CDS Bind_3190 NC_010581.1 3629787 3629999 D hypothetical protein 3629787..3629999 Beijerinckia indica subsp. indica ATCC 9039 6198520 YP_001834240.1 CDS Bind_3191 NC_010581.1 3630079 3630954 R hypothetical protein complement(3630079..3630954) Beijerinckia indica subsp. indica ATCC 9039 6198521 YP_001834241.1 CDS Bind_3192 NC_010581.1 3631021 3633168 R KEGG: mex:Mext_4027 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polyribonucleotide nucleotidyltransferase complement(3631021..3633168) Beijerinckia indica subsp. indica ATCC 9039 6198522 YP_001834242.1 CDS rpsO NC_010581.1 3633799 3634068 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(3633799..3634068) Beijerinckia indica subsp. indica ATCC 9039 6198768 YP_001834243.1 CDS Bind_3194 NC_010581.1 3634503 3635684 D KEGG: mex:Mext_2688 putative membrane protein of unknown function; integral membrane protein-like protein 3634503..3635684 Beijerinckia indica subsp. indica ATCC 9039 6198769 YP_001834244.1 CDS Bind_3195 NC_010581.1 3635811 3636740 R PFAM: protein of unknown function DUF344; KEGG: bcs:BCAN_A0303 protein of unknown function DUF344; hypothetical protein complement(3635811..3636740) Beijerinckia indica subsp. indica ATCC 9039 6198770 YP_001834245.1 CDS Bind_3196 NC_010581.1 3637251 3638321 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_0196 histidine kinase; histidine kinase 3637251..3638321 Beijerinckia indica subsp. indica ATCC 9039 6199310 YP_001834246.1 CDS Bind_3197 NC_010581.1 3638322 3638957 D KEGG: xau:Xaut_1830 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 3638322..3638957 Beijerinckia indica subsp. indica ATCC 9039 6199311 YP_001834247.1 CDS Bind_3198 NC_010581.1 3638972 3639682 D KEGG: bja:blr0640 DNA polymerase III epsilon chain; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 3638972..3639682 Beijerinckia indica subsp. indica ATCC 9039 6199312 YP_001834248.1 CDS Bind_3199 NC_010581.1 3639820 3640380 D KEGG: cel:F53H1.4 F53H1.4c; hypothetical protein 3639820..3640380 Beijerinckia indica subsp. indica ATCC 9039 6199168 YP_001834249.1 CDS Bind_3200 NC_010581.1 3640434 3640916 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(3640434..3640916) Beijerinckia indica subsp. indica ATCC 9039 6199169 YP_001834250.1 CDS Bind_3201 NC_010581.1 3641131 3643998 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein; hypothetical protein 3641131..3643998 Beijerinckia indica subsp. indica ATCC 9039 6199170 YP_001834251.1 CDS Bind_3202 NC_010581.1 3644206 3645774 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bbt:BBta_1705 putative oxidoreductase, GMC family; gluconate 2-dehydrogenase (acceptor) complement(3644206..3645774) Beijerinckia indica subsp. indica ATCC 9039 6201216 YP_001834252.1 CDS Bind_3203 NC_010581.1 3645801 3646352 R KEGG: oan:Oant_0061 hypothetical protein; hypothetical protein complement(3645801..3646352) Beijerinckia indica subsp. indica ATCC 9039 6201217 YP_001834253.1 CDS Bind_3204 NC_010581.1 3646447 3646842 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3646447..3646842) Beijerinckia indica subsp. indica ATCC 9039 6201218 YP_001834254.1 CDS Bind_3205 NC_010581.1 3646848 3647279 R PFAM: cytochrome c class I; KEGG: azc:AZC_0960 cytochrome c; cytochrome c class I complement(3646848..3647279) Beijerinckia indica subsp. indica ATCC 9039 6200386 YP_001834255.1 CDS Bind_3206 NC_010581.1 3647720 3648661 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: nar:Saro_3315 transport-associated; transport-associated 3647720..3648661 Beijerinckia indica subsp. indica ATCC 9039 6200387 YP_001834256.1 CDS Bind_3207 NC_010581.1 3648885 3649178 D KEGG: pde:Pden_3781 hypothetical protein; hypothetical protein 3648885..3649178 Beijerinckia indica subsp. indica ATCC 9039 6200388 YP_001834257.1 CDS Bind_3208 NC_010581.1 3649529 3649954 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bja:bll5071 mechanosensitive channel homolog; large conductance mechanosensitive channel protein 3649529..3649954 Beijerinckia indica subsp. indica ATCC 9039 6201208 YP_001834258.1 CDS Bind_3209 NC_010581.1 3650231 3651463 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3650231..3651463 Beijerinckia indica subsp. indica ATCC 9039 6201209 YP_001834259.1 CDS Bind_3210 NC_010581.1 3651727 3653034 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(3651727..3653034) Beijerinckia indica subsp. indica ATCC 9039 6201210 YP_001834260.1 CDS Bind_3211 NC_010581.1 3653436 3654020 R KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein complement(3653436..3654020) Beijerinckia indica subsp. indica ATCC 9039 6198566 YP_001834261.1 CDS Bind_3212 NC_010581.1 3654352 3654951 R KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein complement(3654352..3654951) Beijerinckia indica subsp. indica ATCC 9039 6198567 YP_001834262.1 CDS Bind_3213 NC_010581.1 3655478 3656284 D KEGG: gdi:GDI1670 hypothetical protein; hypothetical protein 3655478..3656284 Beijerinckia indica subsp. indica ATCC 9039 6198568 YP_001834263.1 CDS Bind_3214 NC_010581.1 3657236 3657901 D KEGG: rpb:RPB_3326 hypothetical protein; hypothetical protein 3657236..3657901 Beijerinckia indica subsp. indica ATCC 9039 6200158 YP_001834264.1 CDS Bind_3215 NC_010581.1 3658118 3659551 R PFAM: aminotransferase class-III; KEGG: rpe:RPE_1819 aminotransferase class-III; class III aminotransferase complement(3658118..3659551) Beijerinckia indica subsp. indica ATCC 9039 6200159 YP_001834265.1 CDS Bind_3216 NC_010581.1 3660411 3661202 R PFAM: inositol monophosphatase; KEGG: mlo:mlr3921 extragenic suppressor protein SuhB; inositol-phosphate phosphatase complement(3660411..3661202) Beijerinckia indica subsp. indica ATCC 9039 6198624 YP_001834266.1 CDS Bind_3217 NC_010581.1 3661560 3662126 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(3661560..3662126) Beijerinckia indica subsp. indica ATCC 9039 6198625 YP_001834267.1 CDS Bind_3218 NC_010581.1 3662253 3662687 R PFAM: protein of unknown function DUF55; KEGG: azc:AZC_0265 hypothetical protein; hypothetical protein complement(3662253..3662687) Beijerinckia indica subsp. indica ATCC 9039 6198980 YP_001834268.1 CDS gpsA NC_010581.1 3662720 3663727 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3662720..3663727) Beijerinckia indica subsp. indica ATCC 9039 6198981 YP_001834269.1 CDS Bind_3220 NC_010581.1 3663842 3664351 R KEGG: oan:Oant_3315 L-2-amino-thiazoline-4-carboxylic acid hydrolase; L-2-amino-thiazoline-4-carboxylic acid hydrolase complement(3663842..3664351) Beijerinckia indica subsp. indica ATCC 9039 6198982 YP_001834270.1 CDS Bind_3221 NC_010581.1 3664395 3664904 R PFAM: SCP-like extracellular; KEGG: xau:Xaut_2095 SCP-like extracellular; hypothetical protein complement(3664395..3664904) Beijerinckia indica subsp. indica ATCC 9039 6199046 YP_001834271.1 CDS Bind_3222 NC_010581.1 3664915 3667515 R PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel complement(3664915..3667515) Beijerinckia indica subsp. indica ATCC 9039 6199047 YP_001834272.1 CDS Bind_3223 NC_010581.1 3667763 3668833 R KEGG: sme:SMc00355 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(3667763..3668833) Beijerinckia indica subsp. indica ATCC 9039 6199048 YP_001834273.1 CDS Bind_3224 NC_010581.1 3668830 3669915 R PFAM: tRNA synthetase class II (D K and N); KEGG: sme:SMc00356 putative lysyl-tRNA synthetase protein; lysine--tRNA ligase complement(3668830..3669915) Beijerinckia indica subsp. indica ATCC 9039 6198936 YP_001834274.1 CDS Bind_3225 NC_010581.1 3670243 3670812 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3670243..3670812 Beijerinckia indica subsp. indica ATCC 9039 6198937 YP_001834275.1 CDS Bind_3226 NC_010581.1 3670890 3671840 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3999 threonine dehydratase; hypothetical protein 3670890..3671840 Beijerinckia indica subsp. indica ATCC 9039 6198938 YP_001834276.1 CDS Bind_3227 NC_010581.1 3671878 3672192 R KEGG: azc:AZC_0441 hypothetical protein; hypothetical protein complement(3671878..3672192) Beijerinckia indica subsp. indica ATCC 9039 6198833 YP_001834277.1 CDS Bind_3228 NC_010581.1 3672329 3672850 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rsh:Rsph17029_3841 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(3672329..3672850) Beijerinckia indica subsp. indica ATCC 9039 6198834 YP_001834278.1 CDS Bind_3229 NC_010581.1 3672940 3673662 R PFAM: protein of unknown function DUF1428; KEGG: sal:Sala_0015 protein of unknown function DUF1428; hypothetical protein complement(3672940..3673662) Beijerinckia indica subsp. indica ATCC 9039 6198835 YP_001834279.1 CDS Bind_3230 NC_010581.1 3673780 3674484 D PFAM: helix-turn-helix HxlR type; KEGG: oan:Oant_2549 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3673780..3674484 Beijerinckia indica subsp. indica ATCC 9039 6198829 YP_001834280.1 CDS Bind_3231 NC_010581.1 3674493 3675944 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpe:RPE_2748 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein complement(3674493..3675944) Beijerinckia indica subsp. indica ATCC 9039 6198830 YP_001834281.1 CDS Bind_3232 NC_010581.1 3676326 3677156 R PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(3676326..3677156) Beijerinckia indica subsp. indica ATCC 9039 6198831 YP_001834282.1 CDS Bind_3233 NC_010581.1 3677276 3677716 D PFAM: protein of unknown function DUF1036; KEGG: azc:AZC_0444 hypothetical protein; hypothetical protein 3677276..3677716 Beijerinckia indica subsp. indica ATCC 9039 6198779 YP_001834283.1 CDS Bind_3234 NC_010581.1 3677730 3678704 R KEGG: ret:RHE_CH03667 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(3677730..3678704) Beijerinckia indica subsp. indica ATCC 9039 6198780 YP_001834284.1 CDS Bind_3235 NC_010581.1 3679143 3681086 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4428 PAS sensor protein; histidine kinase complement(3679143..3681086) Beijerinckia indica subsp. indica ATCC 9039 6198781 YP_001834285.1 CDS Bind_3236 NC_010581.1 3681536 3681697 D KEGG: pla:Plav_0060 hypothetical protein; hypothetical protein 3681536..3681697 Beijerinckia indica subsp. indica ATCC 9039 6198610 YP_001834286.1 CDS Bind_3237 NC_010581.1 3681847 3682200 D KEGG: bja:bll1466 hypothetical protein; hypothetical protein 3681847..3682200 Beijerinckia indica subsp. indica ATCC 9039 6198611 YP_001834287.1 CDS Bind_3238 NC_010581.1 3682253 3682807 D hypothetical protein 3682253..3682807 Beijerinckia indica subsp. indica ATCC 9039 6198612 YP_001834288.1 CDS Bind_3239 NC_010581.1 3682811 3683518 R in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator complement(3682811..3683518) Beijerinckia indica subsp. indica ATCC 9039 6198984 YP_001834289.1 CDS Bind_3240 NC_010581.1 3684356 3684796 D KEGG: rpe:RPE_1750 hypothetical protein; hypothetical protein 3684356..3684796 Beijerinckia indica subsp. indica ATCC 9039 6198985 YP_001834290.1 CDS Bind_3241 NC_010581.1 3684895 3685467 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3684895..3685467 Beijerinckia indica subsp. indica ATCC 9039 6198986 YP_001834291.1 CDS Bind_3242 NC_010581.1 3685653 3687050 D TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: mex:Mext_2664 fumarate hydratase, class II; class II fumarate hydratase 3685653..3687050 Beijerinckia indica subsp. indica ATCC 9039 6198473 YP_001834292.1 CDS Bind_3243 NC_010581.1 3687135 3687863 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(3687135..3687863) Beijerinckia indica subsp. indica ATCC 9039 6198474 YP_001834293.1 CDS Bind_3244 NC_010581.1 3688152 3688940 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0281 putative short chain dehydrogenase/reductase family member; short-chain dehydrogenase/reductase SDR complement(3688152..3688940) Beijerinckia indica subsp. indica ATCC 9039 6198475 YP_001834294.1 CDS Bind_3245 NC_010581.1 3689022 3689495 R PFAM: protein of unknown function DUF1332; KEGG: bbt:BBta_0275 hypothetical protein; hypothetical protein complement(3689022..3689495) Beijerinckia indica subsp. indica ATCC 9039 6198927 YP_001834295.1 CDS Bind_3246 NC_010581.1 3689546 3689938 R hypothetical protein complement(3689546..3689938) Beijerinckia indica subsp. indica ATCC 9039 6198928 YP_001834296.1 CDS Bind_3247 NC_010581.1 3690289 3692709 D KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 3690289..3692709 Beijerinckia indica subsp. indica ATCC 9039 6198929 YP_001834297.1 CDS Bind_3248 NC_010581.1 3692712 3693920 R PFAM: HI0933 family protein; KEGG: nha:Nham_2553 HI0933-like protein; hypothetical protein complement(3692712..3693920) Beijerinckia indica subsp. indica ATCC 9039 6198786 YP_001834298.1 CDS Bind_3249 NC_010581.1 3693980 3694525 R PFAM: protein of unknown function DUF1465; KEGG: nwi:Nwi_2748 protein of unknown function DUF1465; hypothetical protein complement(3693980..3694525) Beijerinckia indica subsp. indica ATCC 9039 6198787 YP_001834299.1 CDS Bind_3250 NC_010581.1 3694625 3695533 R PFAM: ribonuclease BN; KEGG: xau:Xaut_0308 putative ribonuclease BN; ribonuclease BN complement(3694625..3695533) Beijerinckia indica subsp. indica ATCC 9039 6198788 YP_001834300.1 CDS Bind_3251 NC_010581.1 3695838 3697070 D PFAM: protein of unknown function DUF195; KEGG: azc:AZC_0799 RmuC family protein; hypothetical protein 3695838..3697070 Beijerinckia indica subsp. indica ATCC 9039 6198860 YP_001834301.1 CDS Bind_3252 NC_010581.1 3697089 3698459 R hypothetical protein complement(3697089..3698459) Beijerinckia indica subsp. indica ATCC 9039 6198861 YP_001834302.1 CDS Bind_3253 NC_010581.1 3698456 3699838 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA3835 hypothetical protein; Sel1 domain-containing protein complement(3698456..3699838) Beijerinckia indica subsp. indica ATCC 9039 6198862 YP_001834303.1 CDS Bind_3254 NC_010581.1 3700156 3703026 R TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, SecA subunit; preprotein translocase subunit SecA complement(3700156..3703026) Beijerinckia indica subsp. indica ATCC 9039 6198712 YP_001834304.1 CDS Bind_3255 NC_010581.1 3703612 3704511 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xau:Xaut_3112 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3703612..3704511 Beijerinckia indica subsp. indica ATCC 9039 6198713 YP_001834305.1 CDS Bind_3256 NC_010581.1 3705010 3706497 D KEGG: gox:GOX0013 hypothetical protein; hypothetical protein 3705010..3706497 Beijerinckia indica subsp. indica ATCC 9039 6198714 YP_001834306.1 CDS Bind_3257 NC_010581.1 3706632 3707012 D PFAM: protein of unknown function DUF488; KEGG: mlo:mll7394 hypothetical protein; hypothetical protein 3706632..3707012 Beijerinckia indica subsp. indica ATCC 9039 6199188 YP_001834307.1 CDS Bind_3258 NC_010581.1 3707047 3709116 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp complement(3707047..3709116) Beijerinckia indica subsp. indica ATCC 9039 6199189 YP_001834308.1 CDS Bind_3259 NC_010581.1 3709221 3709742 D PFAM: UreE urease accessory domain protein; KEGG: bra:BRADO1043 urease accessory protein UreE; UreE urease accessory domain-containing protein 3709221..3709742 Beijerinckia indica subsp. indica ATCC 9039 6199190 YP_001834309.1 CDS Bind_3260 NC_010581.1 3709735 3710421 D PFAM: Urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF; urease accessory protein UreF 3709735..3710421 Beijerinckia indica subsp. indica ATCC 9039 6199171 YP_001834310.1 CDS Bind_3261 NC_010581.1 3710536 3711201 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG; urease accessory protein UreG 3710536..3711201 Beijerinckia indica subsp. indica ATCC 9039 6199172 YP_001834311.1 CDS Bind_3262 NC_010581.1 3711361 3711675 R KEGG: mex:Mext_3140 hypothetical protein; hypothetical protein complement(3711361..3711675) Beijerinckia indica subsp. indica ATCC 9039 6199173 YP_001834312.1 CDS Bind_3263 NC_010581.1 3711780 3712160 R PFAM: Secreted repeat of unknown function; KEGG: tbd:Tbd_1655 probable transmembrane protein; hypothetical protein complement(3711780..3712160) Beijerinckia indica subsp. indica ATCC 9039 6199081 YP_001834313.1 CDS Bind_3264 NC_010581.1 3712213 3713202 R KEGG: pla:Plav_2197 hypothetical protein; hypothetical protein complement(3712213..3713202) Beijerinckia indica subsp. indica ATCC 9039 6199082 YP_001834314.1 CDS Bind_3265 NC_010581.1 3713205 3714518 R PFAM: protein of unknown function DUF323; KEGG: pla:Plav_2198 protein of unknown function DUF323; hypothetical protein complement(3713205..3714518) Beijerinckia indica subsp. indica ATCC 9039 6199083 YP_001834315.1 CDS Bind_3266 NC_010581.1 3714681 3716081 R KEGG: gsu:GSU2811 cytochrome c Hsc; cytochrome c Hsc complement(3714681..3716081) Beijerinckia indica subsp. indica ATCC 9039 6199014 YP_001834316.1 CDS Bind_3267 NC_010581.1 3716250 3717158 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1358 transcriptional regulator protein; LysR family transcriptional regulator complement(3716250..3717158) Beijerinckia indica subsp. indica ATCC 9039 6199015 YP_001834317.1 CDS Bind_3268 NC_010581.1 3717541 3719232 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 3717541..3719232 Beijerinckia indica subsp. indica ATCC 9039 6199016 YP_001834318.1 CDS Bind_3269 NC_010581.1 3719344 3721617 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_0624 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase 3719344..3721617 Beijerinckia indica subsp. indica ATCC 9039 6198583 YP_001834319.1 CDS Bind_3270 NC_010581.1 3721698 3723467 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_0623 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3721698..3723467 Beijerinckia indica subsp. indica ATCC 9039 6198584 YP_001834320.1 CDS Bind_3271 NC_010581.1 3723552 3724301 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sal:Sala_0178 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit 3723552..3724301 Beijerinckia indica subsp. indica ATCC 9039 6198585 YP_001834321.1 CDS Bind_3272 NC_010581.1 3724378 3725313 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: oan:Oant_1012 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha 3724378..3725313 Beijerinckia indica subsp. indica ATCC 9039 6198930 YP_001834322.1 CDS Bind_3273 NC_010581.1 3725648 3726325 D KEGG: rru:Rru_A1383 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3725648..3726325 Beijerinckia indica subsp. indica ATCC 9039 6198931 YP_001834323.1 CDS Bind_3274 NC_010581.1 3726339 3726995 D KEGG: rru:Rru_A1382 butyrate-acetoacetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3726339..3726995 Beijerinckia indica subsp. indica ATCC 9039 6198932 YP_001834324.1 CDS Bind_3275 NC_010581.1 3727126 3727935 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7857 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 3727126..3727935 Beijerinckia indica subsp. indica ATCC 9039 6200975 YP_001834325.1 CDS Bind_3276 NC_010581.1 3727964 3728407 R KEGG: ddi:DDBDRAFT_0167791 hypothetical protein; hypothetical protein complement(3727964..3728407) Beijerinckia indica subsp. indica ATCC 9039 6200976 YP_001834326.1 CDS Bind_3277 NC_010581.1 3728770 3730101 R KEGG: gox:GOX2647 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(3728770..3730101) Beijerinckia indica subsp. indica ATCC 9039 6200977 YP_001834327.1 CDS Bind_3278 NC_010581.1 3730422 3731150 D KEGG: bbt:BBta_7127 hypothetical protein; hypothetical protein 3730422..3731150 Beijerinckia indica subsp. indica ATCC 9039 6199388 YP_001834328.1 CDS Bind_3279 NC_010581.1 3731288 3731653 R KEGG: bra:BRADO0926 hypothetical protein containing two histidine-rich domains; putative signal peptide; hypothetical protein complement(3731288..3731653) Beijerinckia indica subsp. indica ATCC 9039 6199389 YP_001834329.1 CDS Bind_3280 NC_010581.1 3731933 3732811 R PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3752 transglutaminase-like domain; transglutaminase domain-containing protein complement(3731933..3732811) Beijerinckia indica subsp. indica ATCC 9039 6199390 YP_001834330.1 CDS Bind_3281 NC_010581.1 3732808 3735312 R PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: cak:Caul_2638 protein of unknown function DUF404; hypothetical protein complement(3732808..3735312) Beijerinckia indica subsp. indica ATCC 9039 6201599 YP_001834331.1 CDS Bind_3282 NC_010581.1 3735422 3735967 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: aae:aq_061 molybdenum cofactor biosynthesis MOG; molybdenum cofactor synthesis domain-containing protein complement(3735422..3735967) Beijerinckia indica subsp. indica ATCC 9039 6201600 YP_001834332.1 CDS Bind_3283 NC_010581.1 3736123 3736431 R TIGRFAM: addiction module antidote protein, HigA family; KEGG: rpc:RPC_3187 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein complement(3736123..3736431) Beijerinckia indica subsp. indica ATCC 9039 6201601 YP_001834333.1 CDS Bind_3284 NC_010581.1 3736780 3738057 D PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3736780..3738057 Beijerinckia indica subsp. indica ATCC 9039 6199419 YP_001834334.1 CDS Bind_3286 NC_010581.1 3739339 3740010 R KEGG: scl:sce2908 cell division membrane protein; hypothetical protein complement(3739339..3740010) Beijerinckia indica subsp. indica ATCC 9039 6199421 YP_001834335.1 CDS Bind_3287 NC_010581.1 3740052 3741065 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: xau:Xaut_1267 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(3740052..3741065) Beijerinckia indica subsp. indica ATCC 9039 6201622 YP_001834336.1 CDS Bind_3288 NC_010581.1 3741111 3742499 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mes:Meso_4066 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3741111..3742499) Beijerinckia indica subsp. indica ATCC 9039 6201623 YP_001834337.1 CDS Bind_3289 NC_010581.1 3743000 3743254 R hypothetical protein complement(3743000..3743254) Beijerinckia indica subsp. indica ATCC 9039 6201624 YP_001834338.1 CDS Bind_3290 NC_010581.1 3743256 3743414 R hypothetical protein complement(3743256..3743414) Beijerinckia indica subsp. indica ATCC 9039 6200717 YP_001834339.1 CDS Bind_3291 NC_010581.1 3743471 3743626 R PFAM: protein of unknown function DUF1127; KEGG: oan:Oant_2332 protein of unknown function DUF1127; hypothetical protein complement(3743471..3743626) Beijerinckia indica subsp. indica ATCC 9039 6200718 YP_001834340.1 CDS Bind_3292 NC_010581.1 3743922 3745208 R TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_1395 glucose/galactose transporter; glucose/galactose transporter complement(3743922..3745208) Beijerinckia indica subsp. indica ATCC 9039 6200719 YP_001834341.1 CDS Bind_3293 NC_010581.1 3745371 3746333 R KEGG: xau:Xaut_4319 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; glucokinase complement(3745371..3746333) Beijerinckia indica subsp. indica ATCC 9039 6199779 YP_001834342.1 CDS Bind_3294 NC_010581.1 3746475 3747293 R PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: fre:Franean1_7058 shikimate dehydrogenase substrate binding domain protein; shikimate dehydrogenase complement(3746475..3747293) Beijerinckia indica subsp. indica ATCC 9039 6199780 YP_001834343.1 CDS Bind_3295 NC_010581.1 3747341 3748627 R PFAM: ROK family protein; KEGG: sil:SPO0860 xylose repressor, putative; ROK family protein complement(3747341..3748627) Beijerinckia indica subsp. indica ATCC 9039 6199781 YP_001834344.1 CDS Bind_3296 NC_010581.1 3748936 3749388 D KEGG: mex:Mext_0614 GatB/YqeY; GatB/YqeY 3748936..3749388 Beijerinckia indica subsp. indica ATCC 9039 6201607 YP_001834345.1 CDS Bind_3297 NC_010581.1 3749399 3750220 R KEGG: dol:Dole_1084 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(3749399..3750220) Beijerinckia indica subsp. indica ATCC 9039 6201608 YP_001834346.1 CDS Bind_3298 NC_010581.1 3750545 3752542 D KEGG: rpb:RPB_4132 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 3750545..3752542 Beijerinckia indica subsp. indica ATCC 9039 6201609 YP_001834347.1 CDS Bind_3299 NC_010581.1 3753204 3755261 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3753204..3755261 Beijerinckia indica subsp. indica ATCC 9039 6200804 YP_001834348.1 CDS Bind_3300 NC_010581.1 3755505 3756459 R KEGG: nha:Nham_4014 ISSpo6, transposase orf A; transposase complement(join(3755505..3756116,3756115..3756459)) Beijerinckia indica subsp. indica ATCC 9039 6200805 YP_001834349.1 CDS Bind_3301 NC_010581.1 3756679 3758703 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3956 putative two-component system histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3756679..3758703) Beijerinckia indica subsp. indica ATCC 9039 6200806 YP_001834350.1 CDS Bind_3302 NC_010581.1 3758700 3759392 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mll4419 two-component response regulator; two component transcriptional regulator complement(3758700..3759392) Beijerinckia indica subsp. indica ATCC 9039 6201761 YP_001834351.1 CDS Bind_3303 NC_010581.1 3759400 3760941 R KEGG: bja:blr7618 hypothetical protein; hypothetical protein complement(3759400..3760941) Beijerinckia indica subsp. indica ATCC 9039 6201762 YP_001834352.1 CDS Bind_3304 NC_010581.1 3761100 3761375 D hypothetical protein 3761100..3761375 Beijerinckia indica subsp. indica ATCC 9039 6201763 YP_001834353.1 CDS Bind_3305 NC_010581.1 3761372 3763564 R TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA4387 possible ferrichrome-iron receptor; outer membrane insertion C-terminal signal complement(3761372..3763564) Beijerinckia indica subsp. indica ATCC 9039 6201395 YP_001834354.1 CDS Bind_3306 NC_010581.1 3763768 3764382 D KEGG: bja:bll2452 hypothetical protein; hypothetical protein 3763768..3764382 Beijerinckia indica subsp. indica ATCC 9039 6201396 YP_001834355.1 CDS Bind_3307 NC_010581.1 3764467 3765087 R KEGG: azc:AZC_1764 urease beta subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region; urease subunit gamma complement(3764467..3765087) Beijerinckia indica subsp. indica ATCC 9039 6201397 YP_001834356.1 CDS Bind_3308 NC_010581.1 3765284 3766096 R PFAM: Urease accessory protein UreD; KEGG: xau:Xaut_4154 urease accessory protein UreD; urease accessory protein UreD complement(3765284..3766096) Beijerinckia indica subsp. indica ATCC 9039 6200929 YP_001834357.1 CDS Bind_3309 NC_010581.1 3766173 3766691 R PFAM: protein of unknown function DUF1178; KEGG: bja:blr0212 hypothetical protein; hypothetical protein complement(3766173..3766691) Beijerinckia indica subsp. indica ATCC 9039 6200930 YP_001834358.1 CDS Bind_3310 NC_010581.1 3766697 3766984 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: pla:Plav_1737 glutaredoxin 3; glutaredoxin 3 complement(3766697..3766984) Beijerinckia indica subsp. indica ATCC 9039 6200931 YP_001834359.1 CDS Bind_3311 NC_010581.1 3767341 3767907 D KEGG: sme:SMc02769 hypothetical protein; hypothetical protein 3767341..3767907 Beijerinckia indica subsp. indica ATCC 9039 6201507 YP_001834360.1 CDS Bind_3312 NC_010581.1 3768023 3769084 D PFAM: Extensin family protein; KEGG: azc:AZC_4252 putative uncharacterized protein; extensin family protein 3768023..3769084 Beijerinckia indica subsp. indica ATCC 9039 6201508 YP_001834361.1 CDS Bind_3313 NC_010581.1 3769240 3769929 D PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 3769240..3769929 Beijerinckia indica subsp. indica ATCC 9039 6201509 YP_001834362.1 CDS Bind_3314 NC_010581.1 3770199 3771377 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: mes:Meso_3598 domain of unknown function DUF1730; iron-sulfur cluster binding protein 3770199..3771377 Beijerinckia indica subsp. indica ATCC 9039 6199716 YP_001834363.1 CDS Bind_3315 NC_010581.1 3771374 3772249 D PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bja:blr6839 hypothetical protein; 3-beta hydroxysteroid dehydrogenase/isomerase 3771374..3772249 Beijerinckia indica subsp. indica ATCC 9039 6199717 YP_001834364.1 CDS Bind_3316 NC_010581.1 3772480 3773895 D KEGG: nmu:Nmul_A0298 hypothetical protein; hypothetical protein 3772480..3773895 Beijerinckia indica subsp. indica ATCC 9039 6199718 YP_001834365.1 CDS Bind_3317 NC_010581.1 3773999 3774673 R KEGG: gdi:GDI0218 hypothetical protein; hypothetical protein complement(3773999..3774673) Beijerinckia indica subsp. indica ATCC 9039 6199730 YP_001834366.1 CDS Bind_3318 NC_010581.1 3774670 3775683 R KEGG: gdi:GDI0217 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(3774670..3775683) Beijerinckia indica subsp. indica ATCC 9039 6199731 YP_001834367.1 CDS Bind_3319 NC_010581.1 3775982 3777127 R TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_1799 coenzyme PQQ biosynthesis protein E; pyrroloquinoline quinone biosynthesis protein PqqE complement(3775982..3777127) Beijerinckia indica subsp. indica ATCC 9039 6199732 YP_001834368.1 CDS Bind_3320 NC_010581.1 3777124 3777411 R PFAM: coenzyme PQQ synthesis D; KEGG: rpa:RPA1949 pyrroloquinoline quinone biosynthesis protein D; coenzyme PQQ synthesis D complement(3777124..3777411) Beijerinckia indica subsp. indica ATCC 9039 6199733 YP_001834369.1 CDS Bind_3321 NC_010581.1 3777445 3778209 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(3777445..3778209) Beijerinckia indica subsp. indica ATCC 9039 6199734 YP_001834370.1 CDS Bind_3322 NC_010581.1 3778206 3779105 R TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: mex:Mext_1819 coenzyme PQQ biosynthesis protein B; coenzyme PQQ biosynthesis protein B complement(3778206..3779105) Beijerinckia indica subsp. indica ATCC 9039 6199735 YP_001834371.1 CDS Bind_3323 NC_010581.1 3779351 3780634 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase; polyhydroxyalkanoate depolymerase complement(3779351..3780634) Beijerinckia indica subsp. indica ATCC 9039 6200056 YP_001834372.1 CDS Bind_3324 NC_010581.1 3781610 3782956 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 3781610..3782956 Beijerinckia indica subsp. indica ATCC 9039 6200057 YP_001834373.1 CDS Bind_3325 NC_010581.1 3783270 3783869 D PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver; two component Fis family transcriptional regulator 3783270..3783869 Beijerinckia indica subsp. indica ATCC 9039 6200058 YP_001834374.1 CDS Bind_3326 NC_010581.1 3784133 3784267 D PFAM: ribosomal protein L34; KEGG: rpe:RPE_0642 ribosomal protein L34; 50S ribosomal protein L34 3784133..3784267 Beijerinckia indica subsp. indica ATCC 9039 6200150 YP_001834375.1 CDS Bind_3327 NC_010581.1 3784327 3785010 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component; ribonuclease P protein component 3784327..3785010 Beijerinckia indica subsp. indica ATCC 9039 6200151 YP_001834376.1 CDS Bind_3328 NC_010581.1 3785007 3786821 D PFAM: 60 kDa inner membrane insertion protein; KEGG: azc:AZC_4053 60 kDa inner membrane protein; 60 kDa inner membrane insertion protein 3785007..3786821 Beijerinckia indica subsp. indica ATCC 9039 6200152 YP_001834377.1 CDS engB NC_010581.1 3786824 3787558 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3786824..3787558 Beijerinckia indica subsp. indica ATCC 9039 6201544 YP_001834378.1 CDS Bind_3330 NC_010581.1 3787668 3788585 D TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_0013 acetylglutamate kinase; acetylglutamate kinase 3787668..3788585 Beijerinckia indica subsp. indica ATCC 9039 6201545 YP_001834379.1 CDS Bind_3331 NC_010581.1 3788582 3789388 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 3788582..3789388 Beijerinckia indica subsp. indica ATCC 9039 6201546 YP_001834380.1 CDS Bind_3332 NC_010581.1 3789459 3790316 D TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: pla:Plav_0267 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3789459..3790316 Beijerinckia indica subsp. indica ATCC 9039 6201693 YP_001834381.1 CDS Bind_3333 NC_010581.1 3790316 3790798 D KEGG: hau:Haur_5091 hypothetical protein; hypothetical protein 3790316..3790798 Beijerinckia indica subsp. indica ATCC 9039 6201694 YP_001834382.1 CDS Bind_3334 NC_010581.1 3790802 3791557 R PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA3846 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3790802..3791557) Beijerinckia indica subsp. indica ATCC 9039 6201695 YP_001834383.1 CDS Bind_3335 NC_010581.1 3791615 3792250 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bja:bll3023 hypothetical protein; phage SPO1 DNA polymerase-like protein complement(3791615..3792250) Beijerinckia indica subsp. indica ATCC 9039 6200459 YP_001834384.1 CDS Bind_3336 NC_010581.1 3792358 3793509 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3792358..3793509 Beijerinckia indica subsp. indica ATCC 9039 6200460 YP_001834385.1 CDS Bind_3337 NC_010581.1 3793639 3793869 D hypothetical protein 3793639..3793869 Beijerinckia indica subsp. indica ATCC 9039 6200461 YP_001834386.1 CDS Bind_3339 NC_010581.1 3794494 3795135 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: csa:Csal_0179 peroxidase; peroxidase 3794494..3795135 Beijerinckia indica subsp. indica ATCC 9039 6200540 YP_001834387.1 CDS Bind_3340 NC_010581.1 3795229 3796260 R PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase; aldo/keto reductase complement(3795229..3796260) Beijerinckia indica subsp. indica ATCC 9039 6200541 YP_001834388.1 CDS Bind_3341 NC_010581.1 3796419 3797282 R PFAM: cyclase family protein; KEGG: art:Arth_3556 cyclase family protein; cyclase family protein complement(3796419..3797282) Beijerinckia indica subsp. indica ATCC 9039 6200603 YP_001834389.1 CDS Bind_3342 NC_010581.1 3797224 3798702 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: spe:Spro_3095 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(3797224..3798702) Beijerinckia indica subsp. indica ATCC 9039 6200604 YP_001834390.1 CDS Bind_3343 NC_010581.1 3798929 3799990 D KEGG: rpc:RPC_0801 hypothetical protein; hypothetical protein 3798929..3799990 Beijerinckia indica subsp. indica ATCC 9039 6200636 YP_001834391.1 CDS Bind_3344 NC_010581.1 3799990 3801027 D PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_6939 hypothetical protein; OmpA/MotB domain-containing protein 3799990..3801027 Beijerinckia indica subsp. indica ATCC 9039 6200637 YP_001834392.1 CDS Bind_3345 NC_010581.1 3801141 3801470 D hypothetical protein 3801141..3801470 Beijerinckia indica subsp. indica ATCC 9039 6200638 YP_001834393.1 CDS Bind_3346 NC_010581.1 3801492 3802481 R PFAM: beta-lactamase domain protein; KEGG: atc:AGR_C_4888 hypothetical protein; beta-lactamase domain-containing protein complement(3801492..3802481) Beijerinckia indica subsp. indica ATCC 9039 6200650 YP_001834394.1 CDS Bind_3347 NC_010581.1 3802609 3803262 R protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC complement(3802609..3803262) Beijerinckia indica subsp. indica ATCC 9039 6200651 YP_001834395.1 CDS Bind_3349 NC_010581.1 3803807 3803998 D hypothetical protein 3803807..3803998 Beijerinckia indica subsp. indica ATCC 9039 6199257 YP_001834396.1 CDS Bind_3350 NC_010581.1 3804037 3804312 D KEGG: gbe:GbCGDNIH1_1600 hypothetical protein; hypothetical protein 3804037..3804312 Beijerinckia indica subsp. indica ATCC 9039 6199258 YP_001834397.1 CDS Bind_3351 NC_010581.1 3804661 3806316 D KEGG: rpa:RPA0245 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 3804661..3806316 Beijerinckia indica subsp. indica ATCC 9039 6200355 YP_001834398.1 CDS rpsP NC_010581.1 3806377 3806739 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3806377..3806739 Beijerinckia indica subsp. indica ATCC 9039 6200356 YP_001834399.1 CDS rimM NC_010581.1 3806793 3807314 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3806793..3807314 Beijerinckia indica subsp. indica ATCC 9039 6200357 YP_001834400.1 CDS Bind_3354 NC_010581.1 3807311 3808027 D KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 3807311..3808027 Beijerinckia indica subsp. indica ATCC 9039 6199980 YP_001834401.1 CDS Bind_3355 NC_010581.1 3808033 3808269 R hypothetical protein complement(3808033..3808269) Beijerinckia indica subsp. indica ATCC 9039 6199981 YP_001834402.1 CDS Bind_3356 NC_010581.1 3808279 3809145 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bja:bll1421 prephenate dehydratase; prephenate dehydratase complement(3808279..3809145) Beijerinckia indica subsp. indica ATCC 9039 6199982 YP_001834403.1 CDS Bind_3357 NC_010581.1 3809588 3810127 D PFAM: cytochrome c class I; KEGG: mex:Mext_0341 cytochrome c class I; cytochrome c class I 3809588..3810127 Beijerinckia indica subsp. indica ATCC 9039 6201626 YP_001834404.1 CDS Bind_3358 NC_010581.1 3810316 3812226 D PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_0134 putative ABC transporter solute-binding protein precursor; extracellular solute-binding protein 3810316..3812226 Beijerinckia indica subsp. indica ATCC 9039 6201627 YP_001834405.1 CDS Bind_3359 NC_010581.1 3812230 3813321 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7053 putative oligopeptide transport protein (ABC superfamily, membrane); binding-protein-dependent transport system inner membrane protein 3812230..3813321 Beijerinckia indica subsp. indica ATCC 9039 6198906 YP_001834406.1 CDS Bind_3360 NC_010581.1 3813323 3814519 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3813323..3814519 Beijerinckia indica subsp. indica ATCC 9039 6198907 YP_001834407.1 CDS Bind_3361 NC_010581.1 3814525 3816177 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1933 ABC transporter related; ABC transporter-like protein 3814525..3816177 Beijerinckia indica subsp. indica ATCC 9039 6198908 YP_001834408.1 CDS Bind_3362 NC_010581.1 3816250 3816648 D PFAM: protein of unknown function DUF423; KEGG: mlo:mll8379 hypothetical protein; hypothetical protein 3816250..3816648 Beijerinckia indica subsp. indica ATCC 9039 6199470 YP_001834409.1 CDS Bind_3363 NC_010581.1 3816822 3817223 D PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator; response regulator receiver protein 3816822..3817223 Beijerinckia indica subsp. indica ATCC 9039 6199471 YP_001834410.1 CDS Bind_3364 NC_010581.1 3817242 3817886 D hypothetical protein 3817242..3817886 Beijerinckia indica subsp. indica ATCC 9039 6199472 YP_001834411.1 CDS Bind_3365 NC_010581.1 3817883 3819850 D PFAM: AsmA family protein; KEGG: rpa:RPA4157 possible AsmA protein, assembly of outer membrane proteins; AsmA family protein 3817883..3819850 Beijerinckia indica subsp. indica ATCC 9039 6198690 YP_001834412.1 CDS Bind_3366 NC_010581.1 3820219 3821070 D TIGRFAM: lytic murein transglycosylase; KEGG: bbt:BBta_4395 putative exported protein of unknown function with transglycolase; lytic murein transglycosylase 3820219..3821070 Beijerinckia indica subsp. indica ATCC 9039 6198691 YP_001834413.1 CDS Bind_3367 NC_010581.1 3821192 3823519 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cak:Caul_3605 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(3821192..3823519) Beijerinckia indica subsp. indica ATCC 9039 6198853 YP_001834414.1 CDS Bind_3368 NC_010581.1 3823512 3823985 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: cak:Caul_3606 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(3823512..3823985) Beijerinckia indica subsp. indica ATCC 9039 6198854 YP_001834415.1 CDS Bind_3369 NC_010581.1 3824043 3825341 R PFAM: cytochrome c class I; KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) complement(3824043..3825341) Beijerinckia indica subsp. indica ATCC 9039 6198855 YP_001834416.1 CDS Bind_3370 NC_010581.1 3825514 3825927 R hypothetical protein complement(3825514..3825927) Beijerinckia indica subsp. indica ATCC 9039 6201633 YP_001834417.1 CDS Bind_3371 NC_010581.1 3826120 3828057 R KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; hypothetical protein complement(3826120..3828057) Beijerinckia indica subsp. indica ATCC 9039 6201634 YP_001834418.1 CDS Bind_3372 NC_010581.1 3828200 3828616 R hypothetical protein complement(3828200..3828616) Beijerinckia indica subsp. indica ATCC 9039 6201635 YP_001834419.1 CDS Bind_3373 NC_010581.1 3828616 3829020 R KEGG: lbl:LBL_0298 lipoprotein releasing system, LolE permease component; hypothetical protein complement(3828616..3829020) Beijerinckia indica subsp. indica ATCC 9039 6201631 YP_001834420.1 CDS Bind_3374 NC_010581.1 3829013 3829786 R PFAM: protein of unknown function DUF847; KEGG: mlo:mlr8547 hypothetical protein; hypothetical protein complement(3829013..3829786) Beijerinckia indica subsp. indica ATCC 9039 6201632 YP_001834421.1 CDS Bind_3375 NC_010581.1 3829848 3830090 R hypothetical protein complement(3829848..3830090) Beijerinckia indica subsp. indica ATCC 9039 6199077 YP_001834422.1 CDS Bind_3376 NC_010581.1 3830175 3830393 R hypothetical protein complement(3830175..3830393) Beijerinckia indica subsp. indica ATCC 9039 6199078 YP_001834423.1 CDS Bind_3377 NC_010581.1 3830963 3831589 R PFAM: regulatory protein MerR; KEGG: atu:Atu1181 hypothetical protein; MerR family transcriptional regulator complement(3830963..3831589) Beijerinckia indica subsp. indica ATCC 9039 6198471 YP_001834424.1 CDS Bind_3378 NC_010581.1 3831787 3832164 R TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: azc:AZC_2293 integration host factor alpha subunit; integration host factor subunit alpha complement(3831787..3832164) Beijerinckia indica subsp. indica ATCC 9039 6198472 YP_001834425.1 CDS Bind_3379 NC_010581.1 3832399 3833379 R KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(3832399..3833379) Beijerinckia indica subsp. indica ATCC 9039 6198399 YP_001834426.1 CDS Bind_3380 NC_010581.1 3833756 3834916 R TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: atc:AGR_C_2176 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX complement(3833756..3834916) Beijerinckia indica subsp. indica ATCC 9039 6198400 YP_001834427.1 CDS Bind_3381 NC_010581.1 3835302 3835916 R KEGG: xau:Xaut_4383 hypothetical protein; hypothetical protein complement(3835302..3835916) Beijerinckia indica subsp. indica ATCC 9039 6198627 YP_001834428.1 CDS Bind_3382 NC_010581.1 3836113 3836718 R KEGG: mex:Mext_2051 ubiquinol-cytochrome c chaperone; ubiquinol-cytochrome c chaperone complement(3836113..3836718) Beijerinckia indica subsp. indica ATCC 9039 6198628 YP_001834429.1 CDS Bind_3383 NC_010581.1 3837541 3838014 D PFAM: SmpA/OmlA domain protein; KEGG: rpa:RPA2737 hypothetical protein; SmpA/OmlA domain-containing protein 3837541..3838014 Beijerinckia indica subsp. indica ATCC 9039 6198629 YP_001834430.1 CDS Bind_3384 NC_010581.1 3838440 3839489 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tbr:Tb10.70.3610 hypothetical protein; endonuclease/exonuclease/phosphatase 3838440..3839489 Beijerinckia indica subsp. indica ATCC 9039 6201687 YP_001834431.1 CDS Bind_3385 NC_010581.1 3839569 3841413 R PFAM: glycoside hydrolase 15-related; KEGG: bxe:Bxe_A3307 hypothetical protein; glycoside hydrolase 15-like protein complement(3839569..3841413) Beijerinckia indica subsp. indica ATCC 9039 6201688 YP_001834432.1 CDS Bind_3386 NC_010581.1 3841836 3842783 R KEGG: bja:blr4624 hypothetical protein; hypothetical protein complement(3841836..3842783) Beijerinckia indica subsp. indica ATCC 9039 6201689 YP_001834433.1 CDS Bind_3387 NC_010581.1 3843056 3843733 R PFAM: transcriptional regulator domain protein; KEGG: rle:RL0727 putative two-component regulator transcriptional regulatory protein; two component transcriptional regulator complement(3843056..3843733) Beijerinckia indica subsp. indica ATCC 9039 6201705 YP_001834434.1 CDS Bind_3388 NC_010581.1 3844410 3846119 D KEGG: zmo:ZMO1458 hypothetical protein; hypothetical protein 3844410..3846119 Beijerinckia indica subsp. indica ATCC 9039 6201706 YP_001834435.1 CDS Bind_3389 NC_010581.1 3846864 3848552 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gdi:GDI0172 pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 3846864..3848552 Beijerinckia indica subsp. indica ATCC 9039 6201319 YP_001834436.1 CDS Bind_3390 NC_010581.1 3848656 3849981 D PFAM: major facilitator superfamily MFS_1; KEGG: zmo:ZMO1457 MFS permease; major facilitator transporter 3848656..3849981 Beijerinckia indica subsp. indica ATCC 9039 6201320 YP_001834437.1 CDS Bind_3391 NC_010581.1 3849953 3850324 R KEGG: azc:AZC_0964 hypothetical protein; hypothetical protein complement(3849953..3850324) Beijerinckia indica subsp. indica ATCC 9039 6201321 YP_001834438.1 CDS Bind_3392 NC_010581.1 3850468 3852537 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: azo:azo1225 sigma-54 dependent transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator complement(3850468..3852537) Beijerinckia indica subsp. indica ATCC 9039 6201702 YP_001834439.1 CDS groEL NC_010581.1 3852790 3854433 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(3852790..3854433) Beijerinckia indica subsp. indica ATCC 9039 6201703 YP_001834440.1 CDS Bind_3394 NC_010581.1 3854658 3855014 R KEGG: azo:azo1222 phenol 2-monooxygenase; phenol 2-monooxygenase complement(3854658..3855014) Beijerinckia indica subsp. indica ATCC 9039 6201704 YP_001834441.1 CDS Bind_3395 NC_010581.1 3855208 3856293 R PFAM: methane/phenol/toluene hydroxylase; KEGG: bbt:BBta_3632 putative methane/phenol/toluene monooxygenase (A subunit, beta chain); methane/phenol/toluene hydroxylase complement(3855208..3856293) Beijerinckia indica subsp. indica ATCC 9039 6201564 YP_001834442.1 CDS Bind_3396 NC_010581.1 3856357 3857415 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: azo:azo1220 conserved hypothetical aromatic/alkene monooxygenase, subunit gamma; oxidoreductase FAD/NAD(P)-binding subunit complement(3856357..3857415) Beijerinckia indica subsp. indica ATCC 9039 6201565 YP_001834443.1 CDS Bind_3397 NC_010581.1 3857579 3859237 R PFAM: methane/phenol/toluene hydroxylase; KEGG: bja:blr3677 putative monooxygenase component; methane monooxygenase complement(3857579..3859237) Beijerinckia indica subsp. indica ATCC 9039 6200588 YP_001834444.1 CDS Bind_3398 NC_010581.1 3859718 3860926 D KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 3859718..3860926 Beijerinckia indica subsp. indica ATCC 9039 6200589 YP_001834445.1 CDS Bind_3399 NC_010581.1 3860960 3861310 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pde:Pden_3135 arsenate reductase; arsenate reductase complement(3860960..3861310) Beijerinckia indica subsp. indica ATCC 9039 6200590 YP_001834446.1 CDS Bind_3400 NC_010581.1 3861310 3861828 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rpd:RPD_4144 OmpA/MotB; peptidoglycan-associated lipoprotein complement(3861310..3861828) Beijerinckia indica subsp. indica ATCC 9039 6201718 YP_001834447.1 CDS Bind_3401 NC_010581.1 3862144 3862452 D hypothetical protein 3862144..3862452 Beijerinckia indica subsp. indica ATCC 9039 6201719 YP_001834448.1 CDS Bind_3402 NC_010581.1 3862596 3863486 D PFAM: protein of unknown function UPF0187; KEGG: xcc:XCC3288 hypothetical protein; hypothetical protein 3862596..3863486 Beijerinckia indica subsp. indica ATCC 9039 6201720 YP_001834449.1 CDS Bind_3403 NC_010581.1 3863512 3863736 D hypothetical protein 3863512..3863736 Beijerinckia indica subsp. indica ATCC 9039 6201069 YP_001834450.1 CDS Bind_3404 NC_010581.1 3863733 3864626 D PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase; diaminopimelate epimerase 3863733..3864626 Beijerinckia indica subsp. indica ATCC 9039 6201070 YP_001834451.1 CDS Bind_3405 NC_010581.1 3864623 3865930 D KEGG: azc:AZC_3709 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 3864623..3865930 Beijerinckia indica subsp. indica ATCC 9039 6201593 YP_001834452.1 CDS Bind_3406 NC_010581.1 3865982 3866128 D KEGG: mex:Mext_2511 hypothetical protein; hypothetical protein 3865982..3866128 Beijerinckia indica subsp. indica ATCC 9039 6201594 YP_001834453.1 CDS Bind_3407 NC_010581.1 3866139 3867116 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_2512 tyrosine recombinase XerD; integrase family protein 3866139..3867116 Beijerinckia indica subsp. indica ATCC 9039 6201595 YP_001834454.1 CDS Bind_3408 NC_010581.1 3867464 3868555 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rpa:RPA4780 periplasmic phosphate-binding protein, (PBP); phosphate ABC transporter substrate-binding protein 3867464..3868555 Beijerinckia indica subsp. indica ATCC 9039 6201298 YP_001834455.1 CDS Bind_3409 NC_010581.1 3868730 3869716 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3722 phosphate ABC transporter, permease protein (PstC); phosphate ABC transporter permease 3868730..3869716 Beijerinckia indica subsp. indica ATCC 9039 6201299 YP_001834456.1 CDS Bind_3410 NC_010581.1 3869809 3870648 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3720 phosphate transport system permease protein PstA; phosphate ABC transporter permease 3869809..3870648 Beijerinckia indica subsp. indica ATCC 9039 6201300 YP_001834457.1 CDS Bind_3411 NC_010581.1 3870645 3871421 D KEGG: rpb:RPB_0779 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 3870645..3871421 Beijerinckia indica subsp. indica ATCC 9039 6200970 YP_001834458.1 CDS Bind_3412 NC_010581.1 3871491 3872222 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 3871491..3872222 Beijerinckia indica subsp. indica ATCC 9039 6200971 YP_001834459.1 CDS Bind_3413 NC_010581.1 3872219 3872977 D TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0202 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3872219..3872977 Beijerinckia indica subsp. indica ATCC 9039 6198538 YP_001834460.1 CDS Bind_3414 NC_010581.1 3873078 3874217 R KEGG: gbe:GbCGDNIH1_1127 hypothetical protein; hypothetical protein complement(3873078..3874217) Beijerinckia indica subsp. indica ATCC 9039 6198539 YP_001834461.1 CDS Bind_3415 NC_010581.1 3874269 3875249 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(3874269..3875249) Beijerinckia indica subsp. indica ATCC 9039 6198540 YP_001834462.1 CDS Bind_3416 NC_010581.1 3875299 3877674 R KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R complement(3875299..3877674) Beijerinckia indica subsp. indica ATCC 9039 6199004 YP_001834463.1 CDS Bind_3417 NC_010581.1 3877727 3880612 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(3877727..3880612) Beijerinckia indica subsp. indica ATCC 9039 6199005 YP_001834464.1 CDS pyrB NC_010581.1 3880910 3881863 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3880910..3881863 Beijerinckia indica subsp. indica ATCC 9039 6199006 YP_001834465.1 CDS Bind_3419 NC_010581.1 3881868 3883208 D KEGG: nwi:Nwi_2008 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 3881868..3883208 Beijerinckia indica subsp. indica ATCC 9039 6199008 YP_001834466.1 CDS Bind_3420 NC_010581.1 3883258 3883851 D PFAM: protein of unknown function DUF205; KEGG: rpb:RPB_2422 hypothetical protein; hypothetical protein 3883258..3883851 Beijerinckia indica subsp. indica ATCC 9039 6199009 YP_001834467.1 CDS Bind_3421 NC_010581.1 3883848 3885137 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA; DNA protecting protein DprA 3883848..3885137 Beijerinckia indica subsp. indica ATCC 9039 6199314 YP_001834468.1 CDS Bind_3422 NC_010581.1 3885167 3885667 R PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3230 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3885167..3885667) Beijerinckia indica subsp. indica ATCC 9039 6199315 YP_001834469.1 CDS Bind_3423 NC_010581.1 3885866 3886852 D PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_4784 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 3885866..3886852 Beijerinckia indica subsp. indica ATCC 9039 6199316 YP_001834470.1 CDS Bind_3424 NC_010581.1 3887146 3887898 D PFAM: PRC-barrel domain protein; KEGG: mlo:mll3685 hypothetical protein; PRC-barrel domain-containing protein 3887146..3887898 Beijerinckia indica subsp. indica ATCC 9039 6198875 YP_001834471.1 CDS rpmB NC_010581.1 3888276 3888572 D required for 70S ribosome assembly; 50S ribosomal protein L28 3888276..3888572 Beijerinckia indica subsp. indica ATCC 9039 6198876 YP_001834472.1 CDS Bind_3426 NC_010581.1 3888656 3890578 R KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit complement(3888656..3890578) Beijerinckia indica subsp. indica ATCC 9039 6198877 YP_001834473.1 CDS Bind_3427 NC_010581.1 3890699 3891703 R KEGG: nwi:Nwi_0403 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit complement(3890699..3891703) Beijerinckia indica subsp. indica ATCC 9039 6201258 YP_001834474.1 CDS Bind_3428 NC_010581.1 3891988 3892608 R PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(3891988..3892608) Beijerinckia indica subsp. indica ATCC 9039 6201259 YP_001834475.1 CDS Bind_3429 NC_010581.1 3892730 3893035 D PFAM: BolA family protein; KEGG: azc:AZC_3676 hypothetical protein; BolA family protein 3892730..3893035 Beijerinckia indica subsp. indica ATCC 9039 6201071 YP_001834476.1 CDS Bind_3430 NC_010581.1 3893371 3894756 D KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 3893371..3894756 Beijerinckia indica subsp. indica ATCC 9039 6201072 YP_001834477.1 CDS Bind_3431 NC_010581.1 3894887 3897034 R PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: sen:SACE_6308 glucan 1,4-alpha-glucosidase; glucan 1,4-alpha-glucosidase complement(3894887..3897034) Beijerinckia indica subsp. indica ATCC 9039 6201073 YP_001834478.1 CDS Bind_3432 NC_010581.1 3898364 3898813 D PFAM: FMN-binding domain protein; KEGG: rso:RSc0610 putative signal peptide protein; FMN-binding domain-containing protein 3898364..3898813 Beijerinckia indica subsp. indica ATCC 9039 6201264 YP_001834479.1 CDS Bind_3433 NC_010581.1 3898810 3899673 D PFAM: ApbE family lipoprotein; KEGG: rso:RSc0611 probable thiamine biosynthesis lipoprotein ApbE precursor transmembrane; ApbE family lipoprotein 3898810..3899673 Beijerinckia indica subsp. indica ATCC 9039 6201265 YP_001834480.1 CDS Bind_3434 NC_010581.1 3899670 3900164 D KEGG: rso:RSc0612 probable transmembrane protein; putative transmembrane protein 3899670..3900164 Beijerinckia indica subsp. indica ATCC 9039 6201266 YP_001834481.1 CDS Bind_3435 NC_010581.1 3900421 3901386 D KEGG: pnu:Pnuc_0361 conserved hypothetical secreted protein; hypothetical protein 3900421..3901386 Beijerinckia indica subsp. indica ATCC 9039 6200872 YP_001834482.1 CDS Bind_3436 NC_010581.1 3901558 3903318 R PFAM: AMP-dependent synthetase and ligase; Leucine-rich repeat 2 protein; KEGG: jan:Jann_1256 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(3901558..3903318) Beijerinckia indica subsp. indica ATCC 9039 6200873 YP_001834483.1 CDS Bind_3437 NC_010581.1 3903671 3903919 D KEGG: rpd:RPD_0857 hypothetical protein; hypothetical protein 3903671..3903919 Beijerinckia indica subsp. indica ATCC 9039 6201464 YP_001834484.1 CDS mdoD NC_010581.1 3904009 3905646 D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 3904009..3905646 Beijerinckia indica subsp. indica ATCC 9039 6201465 YP_001834485.1 CDS Bind_3439 NC_010581.1 3905816 3906229 D KEGG: xau:Xaut_3113 hypothetical protein; hypothetical protein 3905816..3906229 Beijerinckia indica subsp. indica ATCC 9039 6201466 YP_001834486.1 CDS Bind_3440 NC_010581.1 3906300 3907121 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mlo:mll0250 transcription regulator; IclR family transcriptional regulator 3906300..3907121 Beijerinckia indica subsp. indica ATCC 9039 6201652 YP_001834487.1 CDS Bind_3441 NC_010581.1 3907131 3907343 R hypothetical protein complement(3907131..3907343) Beijerinckia indica subsp. indica ATCC 9039 6201653 YP_001834488.1 CDS Bind_3442 NC_010581.1 3907406 3908326 R PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase; metallophosphoesterase complement(3907406..3908326) Beijerinckia indica subsp. indica ATCC 9039 6201654 YP_001834489.1 CDS Bind_3443 NC_010581.1 3908532 3909503 R PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bja:blr7895 hypothetical protein; rubrerythrin complement(3908532..3909503) Beijerinckia indica subsp. indica ATCC 9039 6201549 YP_001834490.1 CDS Bind_3444 NC_010581.1 3909742 3910281 D PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase; NUDIX hydrolase 3909742..3910281 Beijerinckia indica subsp. indica ATCC 9039 6201550 YP_001834491.1 CDS Bind_3445 NC_010581.1 3910526 3911017 D KEGG: swi:Swit_3661 hypothetical protein; hypothetical protein 3910526..3911017 Beijerinckia indica subsp. indica ATCC 9039 6201666 YP_001834492.1 CDS Bind_3446 NC_010581.1 3911087 3912553 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gox:GOX0394 two component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3911087..3912553) Beijerinckia indica subsp. indica ATCC 9039 6201667 YP_001834493.1 CDS Bind_3447 NC_010581.1 3912564 3913397 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI3420 two component transcriptional regulator; two component transcriptional regulator complement(3912564..3913397) Beijerinckia indica subsp. indica ATCC 9039 6201668 YP_001834494.1 CDS Bind_3448 NC_010581.1 3914330 3916309 D PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: mex:Mext_2751 protein of unknown function DUF882; hypothetical protein 3914330..3916309 Beijerinckia indica subsp. indica ATCC 9039 6201669 YP_001834495.1 CDS Bind_3449 NC_010581.1 3916749 3917054 D hypothetical protein 3916749..3917054 Beijerinckia indica subsp. indica ATCC 9039 6201670 YP_001834496.1 CDS Bind_3450 NC_010581.1 3917152 3917688 D KEGG: bbr:BB1818 hypothetical protein; hypothetical protein 3917152..3917688 Beijerinckia indica subsp. indica ATCC 9039 6201671 YP_001834497.1 CDS Bind_3451 NC_010581.1 3917752 3919491 R component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase complement(3917752..3919491) Beijerinckia indica subsp. indica ATCC 9039 6201691 YP_001834498.1 CDS Bind_3452 NC_010581.1 3919886 3920530 D KEGG: ehi:22.t00027 villin-related protein; hypothetical protein 3919886..3920530 Beijerinckia indica subsp. indica ATCC 9039 6201692 YP_001834499.1 CDS Bind_3453 NC_010581.1 3920631 3920891 D hypothetical protein 3920631..3920891 Beijerinckia indica subsp. indica ATCC 9039 6201655 YP_001834500.1 CDS Bind_3454 NC_010581.1 3920924 3921847 D PFAM: band 7 protein; KEGG: mbn:Mboo_1173 band 7 protein; hypothetical protein 3920924..3921847 Beijerinckia indica subsp. indica ATCC 9039 6201656 YP_001834501.1 CDS Bind_3455 NC_010581.1 3921935 3922192 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: swi:Swit_4667 prevent-host-death family protein; prevent-host-death family protein complement(3921935..3922192) Beijerinckia indica subsp. indica ATCC 9039 6201657 YP_001834502.1 CDS Bind_3456 NC_010581.1 3922302 3923219 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hne:HNE_1468 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3922302..3923219) Beijerinckia indica subsp. indica ATCC 9039 6201010 YP_001834503.1 CDS Bind_3457 NC_010581.1 3923320 3924753 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3923320..3924753 Beijerinckia indica subsp. indica ATCC 9039 6201011 YP_001834504.1 CDS Bind_3458 NC_010581.1 3924769 3925386 D KEGG: pfo:Pfl_2359 3-isopropylmalate dehydratase small subunit region; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 3924769..3925386 Beijerinckia indica subsp. indica ATCC 9039 6201012 YP_001834505.1 CDS Bind_3459 NC_010581.1 3925383 3926276 D PFAM: alpha/beta hydrolase fold; KEGG: sec:SC0377 putative hydrolase or acyltransferase; alpha/beta hydrolase fold protein 3925383..3926276 Beijerinckia indica subsp. indica ATCC 9039 6200745 YP_001834506.1 CDS Bind_3460 NC_010581.1 3926339 3927658 R PFAM: sodium:dicarboxylate symporter; KEGG: psp:PSPPH_1577 C4-dicarboxylate transport protein 3; sodium:dicarboxylate symporter complement(3926339..3927658) Beijerinckia indica subsp. indica ATCC 9039 6200746 YP_001834507.1 CDS Bind_3461 NC_010581.1 3934434 3935255 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: oan:Oant_4151 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3934434..3935255 Beijerinckia indica subsp. indica ATCC 9039 6201618 YP_001834508.1 CDS Bind_3462 NC_010581.1 3935400 3937058 D PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5; extracellular solute-binding protein 3935400..3937058 Beijerinckia indica subsp. indica ATCC 9039 6201062 YP_001834509.1 CDS Bind_3463 NC_010581.1 3937055 3937975 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3937055..3937975 Beijerinckia indica subsp. indica ATCC 9039 6201063 YP_001834510.1 CDS Bind_3464 NC_010581.1 3937977 3939038 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3937977..3939038 Beijerinckia indica subsp. indica ATCC 9039 6198378 YP_001834511.1 CDS Bind_3465 NC_010581.1 3939035 3940681 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related; ABC transporter-like protein 3939035..3940681 Beijerinckia indica subsp. indica ATCC 9039 6198379 YP_001834512.1 CDS Bind_3466 NC_010581.1 3940758 3941783 R PFAM: fructose-bisphosphate aldolase class-I; KEGG: azc:AZC_0501 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase complement(3940758..3941783) Beijerinckia indica subsp. indica ATCC 9039 6199410 YP_001834513.1 CDS Bind_3467 NC_010581.1 3942098 3943327 R PFAM: phosphoglycerate kinase; KEGG: rpd:RPD_4314 phosphoglycerate kinase; phosphoglycerate kinase complement(3942098..3943327) Beijerinckia indica subsp. indica ATCC 9039 6199411 YP_001834514.1 CDS Bind_3468 NC_010581.1 3943324 3944331 R KEGG: xau:Xaut_3075 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I complement(3943324..3944331) Beijerinckia indica subsp. indica ATCC 9039 6199412 YP_001834515.1 CDS Bind_3469 NC_010581.1 3945207 3945656 D KEGG: rpc:RPC_4765 hypothetical protein; hypothetical protein 3945207..3945656 Beijerinckia indica subsp. indica ATCC 9039 6201696 YP_001834516.1 CDS Bind_3470 NC_010581.1 3945806 3946246 D PFAM: protein of unknown function DUF710; KEGG: azc:AZC_0507 hypothetical protein; hypothetical protein 3945806..3946246 Beijerinckia indica subsp. indica ATCC 9039 6201697 YP_001834517.1 CDS Bind_3471 NC_010581.1 3946524 3947084 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rpa:RPA4454 antifreeze protein, type I:5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 3946524..3947084 Beijerinckia indica subsp. indica ATCC 9039 6201676 YP_001834518.1 CDS Bind_3472 NC_010581.1 3947137 3947961 D PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase; metallophosphoesterase 3947137..3947961 Beijerinckia indica subsp. indica ATCC 9039 6201677 YP_001834519.1 CDS Bind_3473 NC_010581.1 3948071 3948439 D PFAM: copper resistance protein CopC; KEGG: bbt:BBta_p0115 copper resistance protein C; copper resistance protein CopC 3948071..3948439 Beijerinckia indica subsp. indica ATCC 9039 6199719 YP_001834520.1 CDS Bind_3474 NC_010581.1 3948439 3949389 D PFAM: copper resistance D domain protein; KEGG: rpd:RPD_4272 copper resistance D; copper resistance D domain-containing protein 3948439..3949389 Beijerinckia indica subsp. indica ATCC 9039 6199720 YP_001834521.1 CDS Bind_3475 NC_010581.1 3949545 3951740 D KEGG: mex:Mext_1456 hypothetical protein; hypothetical protein 3949545..3951740 Beijerinckia indica subsp. indica ATCC 9039 6201098 YP_001834522.1 CDS Bind_3476 NC_010581.1 3951741 3952802 R PFAM: ferrochelatase; KEGG: xau:Xaut_2814 ferrochelatase; ferrochelatase complement(3951741..3952802) Beijerinckia indica subsp. indica ATCC 9039 6201099 YP_001834523.1 CDS Bind_3477 NC_010581.1 3952822 3953256 R PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_1411 thioesterase superfamily protein; thioesterase superfamily protein complement(3952822..3953256) Beijerinckia indica subsp. indica ATCC 9039 6201100 YP_001834524.1 CDS Bind_3478 NC_010581.1 3953528 3955054 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mex:Mext_1472 5'-nucleotidase; 5'-nucleotidase domain-containing protein 3953528..3955054 Beijerinckia indica subsp. indica ATCC 9039 6199739 YP_001834525.1 CDS Bind_3479 NC_010581.1 3955102 3956112 R hypothetical protein complement(3955102..3956112) Beijerinckia indica subsp. indica ATCC 9039 6199740 YP_001834526.1 CDS Bind_3480 NC_010581.1 3956165 3956773 R PFAM: protein of unknown function DUF477; KEGG: mlo:mll4125 hypothetical protein; hypothetical protein complement(3956165..3956773) Beijerinckia indica subsp. indica ATCC 9039 6199741 YP_001834527.1 CDS Bind_3481 NC_010581.1 3956795 3957667 R PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 protein of unknown function DUF477; hypothetical protein complement(3956795..3957667) Beijerinckia indica subsp. indica ATCC 9039 6199962 YP_001834528.1 CDS Bind_3482 NC_010581.1 3957838 3958443 R PFAM: LemA family protein; KEGG: azc:AZC_2562 LemA protein; LemA family protein complement(3957838..3958443) Beijerinckia indica subsp. indica ATCC 9039 6199963 YP_001834529.1 CDS Bind_3483 NC_010581.1 3958912 3959652 D PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_0383 putative exported protein of unknown function; hypothetical protein 3958912..3959652 Beijerinckia indica subsp. indica ATCC 9039 6201573 YP_001834530.1 CDS Bind_3484 NC_010581.1 3960198 3960881 D KEGG: azc:AZC_0753 hypothetical protein; hypothetical protein 3960198..3960881 Beijerinckia indica subsp. indica ATCC 9039 6201574 YP_001834531.1 CDS Bind_3485 NC_010581.1 3960918 3961808 R PFAM: major intrinsic protein; KEGG: gdi:GDI0872 putative aquaporin; major intrinsic protein complement(3960918..3961808) Beijerinckia indica subsp. indica ATCC 9039 6201575 YP_001834532.1 CDS Bind_3486 NC_010581.1 3962009 3962419 R hypothetical protein complement(3962009..3962419) Beijerinckia indica subsp. indica ATCC 9039 6200371 YP_001834533.1 CDS Bind_3487 NC_010581.1 3962546 3963802 R PFAM: Beta-ketoacyl synthase; KEGG: rru:Rru_A0045 beta-ketoacyl synthase; Beta-ketoacyl synthase complement(3962546..3963802) Beijerinckia indica subsp. indica ATCC 9039 6200372 YP_001834534.1 CDS Bind_3488 NC_010581.1 3963799 3964077 R KEGG: rru:Rru_A0044 acyl carrier protein; hypothetical protein complement(3963799..3964077) Beijerinckia indica subsp. indica ATCC 9039 6200373 YP_001834535.1 CDS Bind_3489 NC_010581.1 3964552 3965025 R TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: azc:AZC_1703 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(3964552..3965025) Beijerinckia indica subsp. indica ATCC 9039 6201596 YP_001834536.1 CDS Bind_3490 NC_010581.1 3965102 3966613 R PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1860 putative membrane transport protein; major facilitator transporter complement(3965102..3966613) Beijerinckia indica subsp. indica ATCC 9039 6201597 YP_001834537.1 CDS Bind_3491 NC_010581.1 3966649 3968556 R KEGG: rru:Rru_A0089 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ complement(3966649..3968556) Beijerinckia indica subsp. indica ATCC 9039 6200643 YP_001834538.1 CDS Bind_3492 NC_010581.1 3968919 3969788 R KEGG: nha:Nham_2821 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(3968919..3969788) Beijerinckia indica subsp. indica ATCC 9039 6200645 YP_001834539.1 CDS Bind_3493 NC_010581.1 3969804 3971372 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(3969804..3971372) Beijerinckia indica subsp. indica ATCC 9039 6201619 YP_001834540.1 CDS Bind_3494 NC_010581.1 3971369 3972400 R KEGG: nha:Nham_2819 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A complement(3971369..3972400) Beijerinckia indica subsp. indica ATCC 9039 6201620 YP_001834541.1 CDS Bind_3495 NC_010581.1 3972521 3973507 R KEGG: nha:Nham_2818 hypothetical protein; hypothetical protein complement(3972521..3973507) Beijerinckia indica subsp. indica ATCC 9039 6198775 YP_001834542.1 CDS Bind_3496 NC_010581.1 3973681 3974058 R PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 protein of unknown function UPF0102; hypothetical protein complement(3973681..3974058) Beijerinckia indica subsp. indica ATCC 9039 6198776 YP_001834543.1 CDS Bind_3497 NC_010581.1 3974055 3974975 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(3974055..3974975) Beijerinckia indica subsp. indica ATCC 9039 6198716 YP_001834544.1 CDS Bind_3498 NC_010581.1 3975204 3976340 R PFAM: Mammalian cell entry related domain protein; KEGG: nha:Nham_1923 mammalian cell entry related; hypothetical protein complement(3975204..3976340) Beijerinckia indica subsp. indica ATCC 9039 6198717 YP_001834545.1 CDS Bind_3499 NC_010581.1 3976340 3977140 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2214 ATP-binding component of ABC transporter; ABC transporter-like protein complement(3976340..3977140) Beijerinckia indica subsp. indica ATCC 9039 6198718 YP_001834546.1 CDS Bind_3500 NC_010581.1 3977144 3978274 R PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 protein of unknown function DUF140; hypothetical protein complement(3977144..3978274) Beijerinckia indica subsp. indica ATCC 9039 6199193 YP_001834547.1 CDS Bind_3501 NC_010581.1 3978532 3979431 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: xau:Xaut_3546 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(3978532..3979431) Beijerinckia indica subsp. indica ATCC 9039 6199194 YP_001834548.1 CDS Bind_3502 NC_010581.1 3979415 3980506 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpb:RPB_1562 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(3979415..3980506) Beijerinckia indica subsp. indica ATCC 9039 6199195 YP_001834549.1 CDS Bind_3503 NC_010581.1 3980503 3981078 R KEGG: xau:Xaut_3548 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(3980503..3981078) Beijerinckia indica subsp. indica ATCC 9039 6201629 YP_001834550.1 CDS Bind_3504 NC_010581.1 3981272 3981496 D KEGG: rpe:RPE_3364 hypothetical protein; hypothetical protein 3981272..3981496 Beijerinckia indica subsp. indica ATCC 9039 6201630 YP_001834551.1 CDS Bind_3505 NC_010581.1 3981603 3982694 R KEGG: mex:Mext_0674 conserved hypothetical protein; putative deoxyribonuclease; putative deoxyribonuclease complement(3981603..3982694) Beijerinckia indica subsp. indica ATCC 9039 6199414 YP_001834552.1 CDS Bind_3506 NC_010581.1 3983271 3984317 D TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bra:BRADO4908 putative cobalamin synthesis protein CobW; cobalamin biosynthesis protein CobW 3983271..3984317 Beijerinckia indica subsp. indica ATCC 9039 6199415 YP_001834553.1 CDS Bind_3507 NC_010581.1 3984320 3987634 D KEGG: bra:BRADO4907 cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 3984320..3987634 Beijerinckia indica subsp. indica ATCC 9039 6200402 YP_001834554.1 CDS Bind_3508 NC_010581.1 3987631 3988923 D TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bbt:BBta_3145 putative precorrin-3B synthase (CobG); precorrin-3B synthase 3987631..3988923 Beijerinckia indica subsp. indica ATCC 9039 6200403 YP_001834555.1 CDS Bind_3509 NC_010581.1 3988920 3989549 D PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bvi:Bcep1808_1609 precorrin-8X methylmutase; precorrin-8X methylmutase 3988920..3989549 Beijerinckia indica subsp. indica ATCC 9039 6200404 YP_001834556.1 CDS Bind_3510 NC_010581.1 3989546 3990295 D TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 3989546..3990295 Beijerinckia indica subsp. indica ATCC 9039 6199063 YP_001834557.1 CDS Bind_3511 NC_010581.1 3990292 3991065 D TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpe:RPE_2223 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 3990292..3991065 Beijerinckia indica subsp. indica ATCC 9039 6199064 YP_001834558.1 CDS Bind_3512 NC_010581.1 3991032 3991799 R KEGG: rpa:RPA2087 cobalt-precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase complement(3991032..3991799) Beijerinckia indica subsp. indica ATCC 9039 6199065 YP_001834559.1 CDS Bind_3513 NC_010581.1 3991829 3993055 D KEGG: xau:Xaut_3280 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 3991829..3993055 Beijerinckia indica subsp. indica ATCC 9039 6200992 YP_001834560.1 CDS Bind_3514 NC_010581.1 3993052 3993429 D KEGG: bbt:BBta_3151 putative CobE protein; putative CobE protein 3993052..3993429 Beijerinckia indica subsp. indica ATCC 9039 6200993 YP_001834561.1 CDS Bind_3515 NC_010581.1 3993426 3994199 D KEGG: bbt:BBta_3152 precorrin-4 C(11)-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 3993426..3994199 Beijerinckia indica subsp. indica ATCC 9039 6201513 YP_001834562.1 CDS Bind_3516 NC_010581.1 3994357 3994980 R PFAM: filamentation induced by cAMP protein Fic; KEGG: rpe:RPE_2126 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(3994357..3994980) Beijerinckia indica subsp. indica ATCC 9039 6201514 YP_001834563.1 CDS Bind_3517 NC_010581.1 3995394 3996497 R TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: bra:BRADO4898 cobalt-precorrin-6A synthase; cobalamin biosynthesis protein CbiD complement(3995394..3996497) Beijerinckia indica subsp. indica ATCC 9039 6201515 YP_001834564.1 CDS Bind_3518 NC_010581.1 3996629 3997897 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 3996629..3997897 Beijerinckia indica subsp. indica ATCC 9039 6199051 YP_001834565.1 CDS Bind_3519 NC_010581.1 3997923 3998627 D PFAM: pseudouridine synthase; KEGG: rpc:RPC_0213 pseudouridine synthase; pseudouridine synthase 3997923..3998627 Beijerinckia indica subsp. indica ATCC 9039 6199052 YP_001834566.1 CDS Bind_3520 NC_010581.1 3998731 3999156 R hypothetical protein complement(3998731..3999156) Beijerinckia indica subsp. indica ATCC 9039 6199053 YP_001834567.1 CDS Bind_3521 NC_010581.1 3999678 4000841 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein complement(3999678..4000841) Beijerinckia indica subsp. indica ATCC 9039 6199359 YP_001834568.1 CDS Bind_3522 NC_010581.1 4000841 4001485 R PFAM: thiamine monophosphate synthase; KEGG: rpe:RPE_4721 thiamine monophosphate synthase; thiamine monophosphate synthase complement(4000841..4001485) Beijerinckia indica subsp. indica ATCC 9039 6199360 YP_001834569.1 CDS Bind_3523 NC_010581.1 4001897 4002724 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4201 regulatory protein GntR HTH; GntR family transcriptional regulator 4001897..4002724 Beijerinckia indica subsp. indica ATCC 9039 6199629 YP_001834570.1 CDS Bind_3524 NC_010581.1 4003212 4004408 D PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V; serine--glyoxylate transaminase 4003212..4004408 Beijerinckia indica subsp. indica ATCC 9039 6199630 YP_001834571.1 CDS Bind_3525 NC_010581.1 4004759 4006045 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll6038 hypothetical transport protein; major facilitator transporter 4004759..4006045 Beijerinckia indica subsp. indica ATCC 9039 6199631 YP_001834572.1 CDS Bind_3526 NC_010581.1 4006260 4006715 R PFAM: PilT protein domain protein; KEGG: rru:Rru_A1709 PilT protein-like; PilT domain-containing protein complement(4006260..4006715) Beijerinckia indica subsp. indica ATCC 9039 6200628 YP_001834573.1 CDS Bind_3527 NC_010581.1 4006712 4006960 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rru:Rru_A1710 prevent-host-death protein; prevent-host-death family protein complement(4006712..4006960) Beijerinckia indica subsp. indica ATCC 9039 6200629 YP_001834574.1 CDS Bind_3528 NC_010581.1 4007298 4008236 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2334 putative AraC family transcriptional regulator; AraC family transcriptional regulator complement(4007298..4008236) Beijerinckia indica subsp. indica ATCC 9039 6200630 YP_001834575.1 CDS Bind_3529 NC_010581.1 4008463 4009233 D KEGG: rle:RL2333 hypothetical protein; hypothetical protein 4008463..4009233 Beijerinckia indica subsp. indica ATCC 9039 6200614 YP_001834576.1 CDS Bind_3530 NC_010581.1 4009958 4011454 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: azc:AZC_4070 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4009958..4011454) Beijerinckia indica subsp. indica ATCC 9039 6200616 YP_001834577.1 CDS Bind_3531 NC_010581.1 4012003 4013268 D TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 4012003..4013268 Beijerinckia indica subsp. indica ATCC 9039 6200613 YP_001834578.1 CDS Bind_3532 NC_010581.1 4013313 4014005 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_1143 putative methyltransferase; type 12 methyltransferase 4013313..4014005 Beijerinckia indica subsp. indica ATCC 9039 6200617 YP_001834579.1 CDS Bind_3533 NC_010581.1 4014015 4014785 R PFAM: protein of unknown function DUF152; KEGG: rpd:RPD_3877 protein of unknown function DUF152; hypothetical protein complement(4014015..4014785) Beijerinckia indica subsp. indica ATCC 9039 6200618 YP_001834580.1 CDS Bind_3534 NC_010581.1 4014793 4015953 R PFAM: protein of unknown function DUF185; KEGG: azc:AZC_3983 hypothetical protein; hypothetical protein complement(4014793..4015953) Beijerinckia indica subsp. indica ATCC 9039 6200619 YP_001834581.1 CDS Bind_3535 NC_010581.1 4015950 4016777 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(4015950..4016777) Beijerinckia indica subsp. indica ATCC 9039 6201709 YP_001834582.1 CDS Bind_3536 NC_010581.1 4017014 4017289 D PFAM: protein of unknown function DUF526; KEGG: mlo:mll2675 hypothetical protein; hypothetical protein 4017014..4017289 Beijerinckia indica subsp. indica ATCC 9039 6201710 YP_001834583.1 CDS Bind_3537 NC_010581.1 4017340 4017672 D hypothetical protein 4017340..4017672 Beijerinckia indica subsp. indica ATCC 9039 6201711 YP_001834584.1 CDS Bind_3538 NC_010581.1 4018093 4019235 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific); NAD(P) transhydrogenase subunit alpha 4018093..4019235 Beijerinckia indica subsp. indica ATCC 9039 6198850 YP_001834585.1 CDS Bind_3539 NC_010581.1 4019302 4019763 D KEGG: azc:AZC_0431 putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein; putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein 4019302..4019763 Beijerinckia indica subsp. indica ATCC 9039 6198851 YP_001834586.1 CDS Bind_3540 NC_010581.1 4019768 4021165 D PFAM: NAD(P) transhydrogenase beta subunit; KEGG: xau:Xaut_1950 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 4019768..4021165 Beijerinckia indica subsp. indica ATCC 9039 6198494 YP_001834587.1 CDS Bind_3541 NC_010581.1 4021242 4021487 R hypothetical protein complement(4021242..4021487) Beijerinckia indica subsp. indica ATCC 9039 6198495 YP_001834588.1 CDS Bind_3542 NC_010581.1 4022043 4024109 D KEGG: pna:Pnap_3987 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 4022043..4024109 Beijerinckia indica subsp. indica ATCC 9039 6198496 YP_001834589.1 CDS Bind_3543 NC_010581.1 4024150 4024752 R hypothetical protein complement(4024150..4024752) Beijerinckia indica subsp. indica ATCC 9039 6201826 YP_001834590.1 CDS Bind_3544 NC_010581.1 4025015 4025689 D KEGG: reh:H16_B1863 cysteine dioxygenase type I; cysteine dioxygenase type I 4025015..4025689 Beijerinckia indica subsp. indica ATCC 9039 6201827 YP_001834591.1 CDS Bind_3545 NC_010581.1 4025804 4026691 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(4025804..4026691) Beijerinckia indica subsp. indica ATCC 9039 6201828 YP_001834592.1 CDS Bind_3546 NC_010581.1 4027258 4028079 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_2558 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4027258..4028079 Beijerinckia indica subsp. indica ATCC 9039 6199292 YP_001834593.1 CDS Bind_3547 NC_010581.1 4028165 4029535 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpa:RPA4367 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4028165..4029535 Beijerinckia indica subsp. indica ATCC 9039 6199293 YP_001834594.1 CDS Bind_3548 NC_010581.1 4029507 4029809 R PFAM: SirA family protein; KEGG: xau:Xaut_4368 SirA family protein; SirA family protein complement(4029507..4029809) Beijerinckia indica subsp. indica ATCC 9039 6201437 YP_001834595.1 CDS Bind_3549 NC_010581.1 4030305 4031336 D PFAM: Luciferase-like monooxygenase; KEGG: xau:Xaut_3263 luciferase family protein; luciferase-like monooxygenase 4030305..4031336 Beijerinckia indica subsp. indica ATCC 9039 6201438 YP_001834596.1 CDS Bind_3550 NC_010581.1 4032318 4032593 D KEGG: bbt:BBta_4144 hypothetical protein; hypothetical protein 4032318..4032593 Beijerinckia indica subsp. indica ATCC 9039 6201439 YP_001834597.1 CDS fliQ NC_010581.1 4033076 4033342 R FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ complement(4033076..4033342) Beijerinckia indica subsp. indica ATCC 9039 6201533 YP_001834598.1 CDS flgD NC_010581.1 4033342 4033767 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein complement(4033342..4033767) Beijerinckia indica subsp. indica ATCC 9039 6201534 YP_001834599.1 CDS flbT NC_010581.1 4033828 4034229 R post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT complement(4033828..4034229) Beijerinckia indica subsp. indica ATCC 9039 6201535 YP_001834600.1 CDS flaF NC_010581.1 4034240 4034515 R acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF complement(4034240..4034515) Beijerinckia indica subsp. indica ATCC 9039 6201781 YP_001834601.1 CDS flgL NC_010581.1 4034610 4035656 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL complement(4034610..4035656) Beijerinckia indica subsp. indica ATCC 9039 6201782 YP_001834602.1 CDS flgK NC_010581.1 4035661 4037142 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(4035661..4037142) Beijerinckia indica subsp. indica ATCC 9039 6200698 YP_001834603.1 CDS flgE NC_010581.1 4037181 4038428 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(4037181..4038428) Beijerinckia indica subsp. indica ATCC 9039 6200699 YP_001834604.1 CDS Bind_3558 NC_010581.1 4038881 4040485 D PFAM: Carbohydrate-selective porin OprB; KEGG: zmo:ZMO0064 carbohydrate-selective porin; carbohydrate-selective porin OprB 4038881..4040485 Beijerinckia indica subsp. indica ATCC 9039 6200700 YP_001834605.1 CDS Bind_3559 NC_010581.1 4040528 4041559 R KEGG: mex:Mext_1590 conserved hypothetical protein; hypothetical protein complement(4040528..4041559) Beijerinckia indica subsp. indica ATCC 9039 6199600 YP_001834606.1 CDS Bind_3560 NC_010581.1 4041827 4042348 D PFAM: ChaC family protein; AIG2 family protein; KEGG: rpe:RPE_4828 ChaC family protein; ChaC family protein 4041827..4042348 Beijerinckia indica subsp. indica ATCC 9039 6199601 YP_001834607.1 CDS Bind_3561 NC_010581.1 4042354 4042911 R KEGG: mex:Mext_1589 hypothetical protein; hypothetical protein complement(4042354..4042911) Beijerinckia indica subsp. indica ATCC 9039 6199602 YP_001834608.1 CDS Bind_3562 NC_010581.1 4042969 4043763 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4864 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4042969..4043763) Beijerinckia indica subsp. indica ATCC 9039 6199527 YP_001834609.1 CDS Bind_3563 NC_010581.1 4043992 4044234 R PFAM: helix-turn-helix domain protein; KEGG: cak:Caul_2278 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(4043992..4044234) Beijerinckia indica subsp. indica ATCC 9039 6199528 YP_001834610.1 CDS Bind_3564 NC_010581.1 4044246 4044473 R hypothetical protein complement(4044246..4044473) Beijerinckia indica subsp. indica ATCC 9039 6201536 YP_001834611.1 CDS Bind_3565 NC_010581.1 4044463 4044924 R hypothetical protein complement(4044463..4044924) Beijerinckia indica subsp. indica ATCC 9039 6201537 YP_001834612.1 CDS Bind_3566 NC_010581.1 4045185 4046174 D PFAM: Catalase domain protein; KEGG: bra:BRADO1380 catalase, homologous to the protein SrpA precursor; catalase domain-containing protein 4045185..4046174 Beijerinckia indica subsp. indica ATCC 9039 6201538 YP_001834613.1 CDS rho NC_010581.1 4046230 4047498 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4046230..4047498) Beijerinckia indica subsp. indica ATCC 9039 6200876 YP_001834614.1 CDS Bind_3568 NC_010581.1 4047907 4048338 R PFAM: conserved hypothetical protein; KEGG: rpd:RPD_0427 conserved hypothetical protein 701; hypothetical protein complement(4047907..4048338) Beijerinckia indica subsp. indica ATCC 9039 6200877 YP_001834615.1 CDS Bind_3569 NC_010581.1 4048399 4049451 R KEGG: nha:Nham_2936 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(4048399..4049451) Beijerinckia indica subsp. indica ATCC 9039 6200878 YP_001834616.1 CDS Bind_3570 NC_010581.1 4050089 4050943 D PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 protein of unknown function DUF299; hypothetical protein 4050089..4050943 Beijerinckia indica subsp. indica ATCC 9039 6200230 YP_001834617.1 CDS Bind_3571 NC_010581.1 4050975 4051613 D PFAM: Maf family protein; KEGG: nha:Nham_0113 maf protein; Maf family protein 4050975..4051613 Beijerinckia indica subsp. indica ATCC 9039 6200231 YP_001834618.1 CDS Bind_3572 NC_010581.1 4051610 4052464 D TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bbt:BBta_1809 shikimate dehydrogenase; shikimate 5-dehydrogenase 4051610..4052464 Beijerinckia indica subsp. indica ATCC 9039 6201485 YP_001834619.1 CDS Bind_3574 NC_010581.1 4053801 4054133 D KEGG: xau:Xaut_2332 ferredoxin, 2Fe-2S (AaFd4); ferredoxin, 2Fe-2S (AaFd4) 4053801..4054133 Beijerinckia indica subsp. indica ATCC 9039 6201487 YP_001834620.1 CDS Bind_3575 NC_010581.1 4054248 4055837 D PFAM: amine oxidase; KEGG: mca:MCA2837 amine oxidase family, flavin-containing protein; amine oxidase 4054248..4055837 Beijerinckia indica subsp. indica ATCC 9039 6200748 YP_001834621.1 CDS Bind_3576 NC_010581.1 4055958 4056947 D PFAM: Luciferase-like monooxygenase; KEGG: bra:BRADO3786 conserved hypothetical protein, putative luciferase-alpha subunit; luciferase-like monooxygenase 4055958..4056947 Beijerinckia indica subsp. indica ATCC 9039 6200749 YP_001834622.1 CDS Bind_3577 NC_010581.1 4057030 4058223 D PFAM: dihydroneopterin aldolase; KEGG: gbe:GbCGDNIH1_0762 dihydroneopterin aldolase; dihydroneopterin aldolase 4057030..4058223 Beijerinckia indica subsp. indica ATCC 9039 6200750 YP_001834623.1 CDS Bind_3578 NC_010581.1 4058296 4058673 D PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 4058296..4058673 Beijerinckia indica subsp. indica ATCC 9039 6200915 YP_001834624.1 CDS Bind_3579 NC_010581.1 4058686 4058949 R PFAM: protein of unknown function DUF167; KEGG: pde:Pden_2174 protein of unknown function DUF167; hypothetical protein complement(4058686..4058949) Beijerinckia indica subsp. indica ATCC 9039 6200916 YP_001834625.1 CDS Bind_3580 NC_010581.1 4058998 4060497 R PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase subunit alpha/beta complement(4058998..4060497) Beijerinckia indica subsp. indica ATCC 9039 6200956 YP_001834626.1 CDS Bind_3581 NC_010581.1 4060950 4061546 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(4060950..4061546) Beijerinckia indica subsp. indica ATCC 9039 6200957 YP_001834627.1 CDS Bind_3582 NC_010581.1 4061817 4062482 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(4061817..4062482) Beijerinckia indica subsp. indica ATCC 9039 6200958 YP_001834628.1 CDS Bind_3583 NC_010581.1 4062627 4063529 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: csa:Csal_0960 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(4062627..4063529) Beijerinckia indica subsp. indica ATCC 9039 6200987 YP_001834629.1 CDS Bind_3584 NC_010581.1 4063796 4064296 R KEGG: ret:RHE_CH00657 hypothetical conserved membrane protein; hypothetical protein complement(4063796..4064296) Beijerinckia indica subsp. indica ATCC 9039 6200988 YP_001834630.1 CDS Bind_3585 NC_010581.1 4064616 4065065 R KEGG: bja:bll6847 hypothetical protein; hypothetical protein complement(4064616..4065065) Beijerinckia indica subsp. indica ATCC 9039 6200989 YP_001834631.1 CDS Bind_3586 NC_010581.1 4065059 4065502 R KEGG: mex:Mext_0694 hypothetical protein; hypothetical protein complement(4065059..4065502) Beijerinckia indica subsp. indica ATCC 9039 6201015 YP_001834632.1 CDS Bind_3587 NC_010581.1 4065548 4066057 R KEGG: ret:RHE_CH00689 hypothetical protein; hypothetical protein complement(4065548..4066057) Beijerinckia indica subsp. indica ATCC 9039 6201016 YP_001834633.1 CDS flhA NC_010581.1 4066406 4068496 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4066406..4068496 Beijerinckia indica subsp. indica ATCC 9039 6201133 YP_001834634.1 CDS Bind_3589 NC_010581.1 4068493 4069248 D KEGG: bja:bll6850 flagellar biosynthesis protein FliR; flagellar biosynthesis protein FliR 4068493..4069248 Beijerinckia indica subsp. indica ATCC 9039 6201134 YP_001834635.1 CDS Bind_3590 NC_010581.1 4069253 4069687 D hypothetical protein 4069253..4069687 Beijerinckia indica subsp. indica ATCC 9039 6201135 YP_001834636.1 CDS Bind_3591 NC_010581.1 4070217 4070918 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4070217..4070918) Beijerinckia indica subsp. indica ATCC 9039 6201205 YP_001834637.1 CDS Bind_3592 NC_010581.1 4071467 4072333 D KEGG: mex:Mext_4396 hypothetical protein; hypothetical protein 4071467..4072333 Beijerinckia indica subsp. indica ATCC 9039 6201206 YP_001834638.1 CDS Bind_3593 NC_010581.1 4072363 4072620 D KEGG: mms:mma_1043 transcriptional regulator, AraC family; hypothetical protein 4072363..4072620 Beijerinckia indica subsp. indica ATCC 9039 6201207 YP_001834639.1 CDS Bind_3595 NC_010581.1 4072840 4073541 D KEGG: mms:mma_1044 hypothetical protein; permease-like protein 4072840..4073541 Beijerinckia indica subsp. indica ATCC 9039 6201252 YP_001834640.1 CDS Bind_3596 NC_010581.1 4073862 4075445 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1436 ABC transporter, duplicated ATPase domains; ABC transporter-like protein 4073862..4075445 Beijerinckia indica subsp. indica ATCC 9039 6201316 YP_001834641.1 CDS Bind_3597 NC_010581.1 4075575 4076138 R PFAM: cobalbumin biosynthesis protein; KEGG: nar:Saro_0322 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein complement(4075575..4076138) Beijerinckia indica subsp. indica ATCC 9039 6201317 YP_001834642.1 CDS Bind_3598 NC_010581.1 4076135 4077568 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: xau:Xaut_4724 protein of unknown function DUF955; XRE family transcriptional regulator complement(4076135..4077568) Beijerinckia indica subsp. indica ATCC 9039 6201318 YP_001834643.1 CDS Bind_3599 NC_010581.1 4077695 4078402 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: dac:Daci_2921 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4077695..4078402 Beijerinckia indica subsp. indica ATCC 9039 6201520 YP_001834644.1 CDS Bind_3600 NC_010581.1 4078696 4079919 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(4078696..4079919) Beijerinckia indica subsp. indica ATCC 9039 6201521 YP_001834645.1 CDS Bind_3601 NC_010581.1 4080278 4081198 R hypothetical protein complement(4080278..4081198) Beijerinckia indica subsp. indica ATCC 9039 6201522 YP_001834646.1 CDS Bind_3602 NC_010581.1 4082059 4083231 D PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1-family ATPase; AFG1 family ATPase 4082059..4083231 Beijerinckia indica subsp. indica ATCC 9039 6201645 YP_001834647.1 CDS Bind_3603 NC_010581.1 4083348 4083965 D PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR; TetR family transcriptional regulator 4083348..4083965 Beijerinckia indica subsp. indica ATCC 9039 6201646 YP_001834648.1 CDS Bind_3604 NC_010581.1 4084457 4085419 D TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent; malate dehydrogenase 4084457..4085419 Beijerinckia indica subsp. indica ATCC 9039 6201778 YP_001834649.1 CDS Bind_3605 NC_010581.1 4085657 4086889 D KEGG: bbt:BBta_0393 succinyl-CoA synthetase subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 4085657..4086889 Beijerinckia indica subsp. indica ATCC 9039 6201779 YP_001834650.1 CDS Bind_3606 NC_010581.1 4086889 4087773 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: azc:AZC_4014 succinyl-CoA ligase alpha subunit; succinyl-CoA synthetase subunit alpha 4086889..4087773 Beijerinckia indica subsp. indica ATCC 9039 6201780 YP_001834651.1 CDS sucA NC_010581.1 4088441 4091461 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 4088441..4091461 Beijerinckia indica subsp. indica ATCC 9039 6198490 YP_001834652.1 CDS Bind_3608 NC_010581.1 4091690 4092907 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: azc:AZC_4011 dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 4091690..4092907 Beijerinckia indica subsp. indica ATCC 9039 6198491 YP_001834653.1 CDS Bind_3609 NC_010581.1 4093119 4094528 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: rpc:RPC_0183 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 4093119..4094528 Beijerinckia indica subsp. indica ATCC 9039 6198492 YP_001834654.1 CDS Bind_3610 NC_010581.1 4094682 4094912 D PFAM: SpoVT/AbrB domain protein; KEGG: aav:Aave_0579 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 4094682..4094912 Beijerinckia indica subsp. indica ATCC 9039 6198675 YP_001834655.1 CDS Bind_3611 NC_010581.1 4094902 4095309 D PFAM: PilT protein domain protein; KEGG: rso:RSc3055 hypothetical protein; PilT domain-containing protein 4094902..4095309 Beijerinckia indica subsp. indica ATCC 9039 6198676 YP_001834656.1 CDS Bind_3612 NC_010581.1 4096013 4097224 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: azc:AZC_0903 serine protease; hypothetical protein 4096013..4097224 Beijerinckia indica subsp. indica ATCC 9039 6199423 YP_001834657.1 CDS Bind_3614 NC_010581.1 4097836 4098369 R PFAM: regulatory protein RecX; KEGG: gbe:GbCGDNIH1_2275 regulatory protein RecX; regulatory protein RecX complement(4097836..4098369) Beijerinckia indica subsp. indica ATCC 9039 6199425 YP_001834658.1 CDS Bind_3616 NC_010581.1 4099841 4100521 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpe:RPE_4843 redoxin domain protein; redoxin domain-containing protein 4099841..4100521 Beijerinckia indica subsp. indica ATCC 9039 6199714 YP_001834659.1 CDS Bind_3617 NC_010581.1 4101179 4103314 D KEGG: rfr:Rfer_3735 twin-arginine translocation pathway signal; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific 4101179..4103314 Beijerinckia indica subsp. indica ATCC 9039 6199715 YP_001834660.1 CDS Bind_3618 NC_010581.1 4103505 4104023 R PFAM: membrane protein of uknown function UCP014873; KEGG: mlo:mlr6724 hypothetical protein; hypothetical protein complement(4103505..4104023) Beijerinckia indica subsp. indica ATCC 9039 6199721 YP_001834661.1 CDS Bind_3619 NC_010581.1 4104145 4105188 D PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr6726 hypothetical protein; hypothetical protein 4104145..4105188 Beijerinckia indica subsp. indica ATCC 9039 6199722 YP_001834662.1 CDS Bind_3620 NC_010581.1 4105495 4107528 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cak:Caul_5142 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4105495..4107528 Beijerinckia indica subsp. indica ATCC 9039 6199726 YP_001834663.1 CDS Bind_3621 NC_010581.1 4107607 4107957 D KEGG: acr:Acry_2706 hypothetical protein; hypothetical protein 4107607..4107957 Beijerinckia indica subsp. indica ATCC 9039 6199727 YP_001834664.1 CDS Bind_3622 NC_010581.1 4107954 4108319 D PFAM: response regulator receiver; KEGG: acr:Acry_2707 response regulator receiver protein; response regulator receiver protein 4107954..4108319 Beijerinckia indica subsp. indica ATCC 9039 6199728 YP_001834665.1 CDS Bind_3623 NC_010581.1 4108455 4110698 D PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: atc:AGR_C_912 chemotaxis protein; CheA signal transduction histidine kinase 4108455..4110698 Beijerinckia indica subsp. indica ATCC 9039 6200036 YP_001834666.1 CDS Bind_3624 NC_010581.1 4110747 4111226 D PFAM: CheW domain protein; KEGG: acr:Acry_2709 putative CheW protein; CheW protein 4110747..4111226 Beijerinckia indica subsp. indica ATCC 9039 6200037 YP_001834667.1 CDS Bind_3625 NC_010581.1 4111223 4112119 D PFAM: MCP methyltransferase CheR-type; KEGG: acr:Acry_2710 protein-glutamate O-methyltransferase; chemotaxis protein CheR 4111223..4112119 Beijerinckia indica subsp. indica ATCC 9039 6200038 YP_001834668.1 CDS Bind_3626 NC_010581.1 4112116 4113198 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 4112116..4113198 Beijerinckia indica subsp. indica ATCC 9039 6200610 YP_001834669.1 CDS Bind_3627 NC_010581.1 4113177 4113566 D PFAM: response regulator receiver; KEGG: cak:Caul_0283 response regulator receiver protein; response regulator receiver protein 4113177..4113566 Beijerinckia indica subsp. indica ATCC 9039 6200611 YP_001834670.1 CDS Bind_3628 NC_010581.1 4113686 4114228 D stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: acr:Acry_2713 CheD, stimulates methylation of MCP proteins; hypothetical protein 4113686..4114228 Beijerinckia indica subsp. indica ATCC 9039 6200984 YP_001834671.1 CDS Bind_3629 NC_010581.1 4114288 4114704 D KEGG: acr:Acry_2714 hypothetical protein; hypothetical protein 4114288..4114704 Beijerinckia indica subsp. indica ATCC 9039 6200985 YP_001834672.1 CDS Bind_3630 NC_010581.1 4114868 4115626 R PFAM: phospholipid/glycerol acyltransferase; KEGG: mes:Meso_3918 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4114868..4115626) Beijerinckia indica subsp. indica ATCC 9039 6200986 YP_001834673.1 CDS Bind_3632 NC_010581.1 4116001 4116918 D KEGG: mex:Mext_4417 hypothetical protein; hypothetical protein 4116001..4116918 Beijerinckia indica subsp. indica ATCC 9039 6198633 YP_001834674.1 CDS Bind_3633 NC_010581.1 4116949 4118718 R KEGG: mex:Mext_1754 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(4116949..4118718) Beijerinckia indica subsp. indica ATCC 9039 6198634 YP_001834675.1 CDS Bind_3634 NC_010581.1 4118819 4119607 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(4118819..4119607) Beijerinckia indica subsp. indica ATCC 9039 6200663 YP_001834676.1 CDS glmM NC_010581.1 4119774 4121129 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(4119774..4121129) Beijerinckia indica subsp. indica ATCC 9039 6200664 YP_001834677.1 CDS Bind_3636 NC_010581.1 4121963 4123150 D TIGRFAM: tol-pal system protein YbgF; KEGG: mex:Mext_4842 tol-pal system protein YbgF; tol-pal system protein YbgF 4121963..4123150 Beijerinckia indica subsp. indica ATCC 9039 6200139 YP_001834678.1 CDS Bind_3637 NC_010581.1 4123144 4124346 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: bja:bll7147 hypothetical protein; tRNA(Ile)-lysidine synthetase 4123144..4124346 Beijerinckia indica subsp. indica ATCC 9039 6200140 YP_001834679.1 CDS Bind_3638 NC_010581.1 4124536 4126458 D KEGG: azc:AZC_0528 FtsH peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 4124536..4126458 Beijerinckia indica subsp. indica ATCC 9039 6200141 YP_001834680.1 CDS Bind_3639 NC_010581.1 4127456 4129156 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: acr:Acry_1741 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase 4127456..4129156 Beijerinckia indica subsp. indica ATCC 9039 6200953 YP_001834681.1 CDS Bind_3640 NC_010581.1 4129175 4130428 D PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6161 cytochrome c, class I; cytochrome c class I 4129175..4130428 Beijerinckia indica subsp. indica ATCC 9039 6200954 YP_001834682.1 CDS Bind_3641 NC_010581.1 4130606 4131607 D PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_2819 alpha/beta hydrolase fold; lysophospholipase 4130606..4131607 Beijerinckia indica subsp. indica ATCC 9039 6200955 YP_001834683.1 CDS Bind_3642 NC_010581.1 4131637 4132440 R TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: xau:Xaut_2818 histidinol-phosphate phosphatase, putative; histidinol-phosphate phosphatase complement(4131637..4132440) Beijerinckia indica subsp. indica ATCC 9039 6199607 YP_001834684.1 CDS Bind_3643 NC_010581.1 4134211 4135176 R PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_1390 putative N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(4134211..4135176) Beijerinckia indica subsp. indica ATCC 9039 6199608 YP_001834685.1 CDS Bind_3644 NC_010581.1 4135592 4135975 D PFAM: response regulator receiver; KEGG: mex:Mext_3276 response regulator receiver; response regulator receiver protein 4135592..4135975 Beijerinckia indica subsp. indica ATCC 9039 6199905 YP_001834686.1 CDS Bind_3645 NC_010581.1 4136065 4137324 D TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pap:PSPA7_4208 probable transglycolase; lytic murein transglycosylase 4136065..4137324 Beijerinckia indica subsp. indica ATCC 9039 6199906 YP_001834687.1 CDS Bind_3646 NC_010581.1 4137605 4139041 D PFAM: short chain fatty acid transporter; KEGG: reu:Reut_B5759 short chain fatty acid transporter; short chain fatty acid transporter 4137605..4139041 Beijerinckia indica subsp. indica ATCC 9039 6199907 YP_001834688.1 CDS Bind_3647 NC_010581.1 4139295 4140035 R KEGG: mex:Mext_0627 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP complement(4139295..4140035) Beijerinckia indica subsp. indica ATCC 9039 6198994 YP_001834689.1 CDS Bind_3648 NC_010581.1 4140032 4140535 R PFAM: flagellar basal body-associated protein FliL; KEGG: rpe:RPE_1163 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL complement(4140032..4140535) Beijerinckia indica subsp. indica ATCC 9039 6198995 YP_001834690.1 CDS Bind_3649 NC_010581.1 4140672 4141706 R PFAM: flagellar L-ring protein; KEGG: rpc:RPC_1101 flagellar basal body L-ring protein; flagellar L-ring protein complement(4140672..4141706) Beijerinckia indica subsp. indica ATCC 9039 6198996 YP_001834691.1 CDS Bind_3650 NC_010581.1 4141708 4142292 R KEGG: rpc:RPC_1100 hypothetical protein; hypothetical protein complement(4141708..4142292) Beijerinckia indica subsp. indica ATCC 9039 6200826 YP_001834692.1 CDS flgI NC_010581.1 4142373 4143485 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein complement(4142373..4143485) Beijerinckia indica subsp. indica ATCC 9039 6200827 YP_001834693.1 CDS Bind_3652 NC_010581.1 4143485 4143985 R KEGG: azc:AZC_0633 flagellar basal-body P-ring formation protein; flagellar basal body P-ring biosynthesis protein-like protein complement(4143485..4143985) Beijerinckia indica subsp. indica ATCC 9039 6200828 YP_001834694.1 CDS flgG NC_010581.1 4143990 4144778 R makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG complement(4143990..4144778) Beijerinckia indica subsp. indica ATCC 9039 6201603 YP_001834695.1 CDS Bind_3654 NC_010581.1 4145001 4145345 R PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE complement(4145001..4145345) Beijerinckia indica subsp. indica ATCC 9039 6201604 YP_001834696.1 CDS flgC NC_010581.1 4145348 4145764 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC complement(4145348..4145764) Beijerinckia indica subsp. indica ATCC 9039 6199365 YP_001834697.1 CDS flgB NC_010581.1 4145767 4146147 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB complement(4145767..4146147) Beijerinckia indica subsp. indica ATCC 9039 6199366 YP_001834698.1 CDS Bind_3657 NC_010581.1 4146398 4147441 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nha:Nham_1928 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 4146398..4147441 Beijerinckia indica subsp. indica ATCC 9039 6199367 YP_001834699.1 CDS Bind_3658 NC_010581.1 4147455 4147862 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rpc:RPC_0523 NUDIX hydrolase; mutator MutT protein complement(4147455..4147862) Beijerinckia indica subsp. indica ATCC 9039 6201500 YP_001834700.1 CDS Bind_3659 NC_010581.1 4147859 4149100 R KEGG: nwi:Nwi_0388 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(4147859..4149100) Beijerinckia indica subsp. indica ATCC 9039 6201501 YP_001834701.1 CDS Bind_3660 NC_010581.1 4149895 4151040 D TIGRFAM: esterase, PHB depolymerase family; KEGG: rpc:RPC_0371 esterase, PHB depolymerase; PHB depolymerase family esterase 4149895..4151040 Beijerinckia indica subsp. indica ATCC 9039 6201502 YP_001834702.1 CDS Bind_3661 NC_010581.1 4151473 4152984 D KEGG: gdi:GDI0639 hypothetical protein; hypothetical protein 4151473..4152984 Beijerinckia indica subsp. indica ATCC 9039 6198420 YP_001834703.1 CDS Bind_3662 NC_010581.1 4153056 4153685 R PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_3224 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(4153056..4153685) Beijerinckia indica subsp. indica ATCC 9039 6198421 YP_001834704.1 CDS Bind_3663 NC_010581.1 4154008 4155099 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: azc:AZC_0565 putative CobW protein; cobalamin synthesis protein P47K 4154008..4155099 Beijerinckia indica subsp. indica ATCC 9039 6198422 YP_001834705.1 CDS Bind_3664 NC_010581.1 4155196 4156245 D PFAM: aldo/keto reductase; KEGG: gox:GOX1598 putative oxidoreductase; aldo/keto reductase 4155196..4156245 Beijerinckia indica subsp. indica ATCC 9039 6198644 YP_001834706.1 CDS Bind_3665 NC_010581.1 4156341 4156649 R KEGG: eba:ebB252 hypothetical protein; hypothetical protein complement(4156341..4156649) Beijerinckia indica subsp. indica ATCC 9039 6198645 YP_001834707.1 CDS Bind_3666 NC_010581.1 4156884 4157705 D KEGG: xau:Xaut_4140 hypothetical protein; hypothetical protein 4156884..4157705 Beijerinckia indica subsp. indica ATCC 9039 6201837 YP_001834708.1 CDS Bind_3667 NC_010581.1 4158679 4159248 D PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator; GcrA cell cycle regulator 4158679..4159248 Beijerinckia indica subsp. indica ATCC 9039 6201838 YP_001834709.1 CDS Bind_3668 NC_010581.1 4160067 4161200 D PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 protein of unknown function DUF140; hypothetical protein 4160067..4161200 Beijerinckia indica subsp. indica ATCC 9039 6201839 YP_001834710.1 CDS Bind_3669 NC_010581.1 4161197 4161997 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0892 ABC transporter related; ABC transporter-like protein 4161197..4161997 Beijerinckia indica subsp. indica ATCC 9039 6198999 YP_001834711.1 CDS Bind_3670 NC_010581.1 4162172 4163233 D PFAM: Mammalian cell entry related domain protein; KEGG: mex:Mext_0893 mammalian cell entry related domain protein; hypothetical protein 4162172..4163233 Beijerinckia indica subsp. indica ATCC 9039 6199000 YP_001834712.1 CDS Bind_3671 NC_010581.1 4163388 4163984 D PFAM: protein of unknown function DUF330; KEGG: mex:Mext_0894 protein of unknown function DUF330; hypothetical protein 4163388..4163984 Beijerinckia indica subsp. indica ATCC 9039 6199001 YP_001834713.1 CDS Bind_3672 NC_010581.1 4163989 4164978 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_0482 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(4163989..4164978) Beijerinckia indica subsp. indica ATCC 9039 6199259 YP_001834714.1 CDS Bind_3673 NC_010581.1 4165047 4166153 R KEGG: mex:Mext_0714 ceramide glucosyltransferase; ceramide glucosyltransferase complement(4165047..4166153) Beijerinckia indica subsp. indica ATCC 9039 6199260 YP_001834715.1 CDS Bind_3674 NC_010581.1 4166561 4167913 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 4166561..4167913 Beijerinckia indica subsp. indica ATCC 9039 6199261 YP_001834716.1 CDS Bind_3675 NC_010581.1 4167876 4169177 R KEGG: xau:Xaut_4721 hypothetical protein; hypothetical protein complement(4167876..4169177) Beijerinckia indica subsp. indica ATCC 9039 6198848 YP_001834717.1 CDS Bind_3676 NC_010581.1 4169400 4169942 D PFAM: CreA family protein; KEGG: nwi:Nwi_1583 CreA; CreA family protein 4169400..4169942 Beijerinckia indica subsp. indica ATCC 9039 6198849 Bind_R0001 tRNA Bind_R0001 NC_010581.1 45447 45536 R tRNA-Ser complement(45447..45536) Beijerinckia indica subsp. indica ATCC 9039 6201621 Bind_R0003 tRNA Bind_R0003 NC_010581.1 431977 432050 D tRNA-Gly 431977..432050 Beijerinckia indica subsp. indica ATCC 9039 6199287 Bind_R0004 tRNA Bind_R0004 NC_010581.1 667706 667781 D tRNA-Lys 667706..667781 Beijerinckia indica subsp. indica ATCC 9039 6200243 Bind_R0006 tRNA Bind_R0006 NC_010581.1 682219 682295 D tRNA-Ile 682219..682295 Beijerinckia indica subsp. indica ATCC 9039 6199322 Bind_R0007 tRNA Bind_R0007 NC_010581.1 682425 682500 D tRNA-Ala 682425..682500 Beijerinckia indica subsp. indica ATCC 9039 6198531 Bind_R0010 tRNA Bind_R0010 NC_010581.1 686093 686169 D tRNA-Met 686093..686169 Beijerinckia indica subsp. indica ATCC 9039 6198869 Bind_R0011 tRNA Bind_R0011 NC_010581.1 759369 759445 R tRNA-His complement(759369..759445) Beijerinckia indica subsp. indica ATCC 9039 6201375 Bind_R0012 tRNA Bind_R0012 NC_010581.1 932762 932837 D tRNA-Glu 932762..932837 Beijerinckia indica subsp. indica ATCC 9039 6199908 Bind_R0013 tRNA Bind_R0013 NC_010581.1 1164649 1164724 D tRNA-Phe 1164649..1164724 Beijerinckia indica subsp. indica ATCC 9039 6201807 Bind_R0014 tRNA Bind_R0014 NC_010581.1 1198305 1198394 R tRNA-Ser complement(1198305..1198394) Beijerinckia indica subsp. indica ATCC 9039 6198681 Bind_R0016 tRNA Bind_R0016 NC_010581.1 1307425 1307502 D tRNA-Trp 1307425..1307502 Beijerinckia indica subsp. indica ATCC 9039 6200055 Bind_R0017 tRNA Bind_R0017 NC_010581.1 1382498 1382573 D tRNA-Thr 1382498..1382573 Beijerinckia indica subsp. indica ATCC 9039 6200385 Bind_R0019 tRNA Bind_R0019 NC_010581.1 1515738 1515822 D tRNA-Leu 1515738..1515822 Beijerinckia indica subsp. indica ATCC 9039 6200077 Bind_R0020 tRNA Bind_R0020 NC_010581.1 1516464 1516535 D tRNA-Val 1516464..1516535 Beijerinckia indica subsp. indica ATCC 9039 6201257 Bind_R0021 tRNA Bind_R0021 NC_010581.1 1547235 1547317 D tRNA-Tyr 1547235..1547317 Beijerinckia indica subsp. indica ATCC 9039 6199579 Bind_R0022 tRNA Bind_R0022 NC_010581.1 1547422 1547495 D tRNA-Gly 1547422..1547495 Beijerinckia indica subsp. indica ATCC 9039 6201235 Bind_R0023 tRNA Bind_R0023 NC_010581.1 1751712 1751788 R tRNA-Arg complement(1751712..1751788) Beijerinckia indica subsp. indica ATCC 9039 6199646 Bind_R0024 tRNA Bind_R0024 NC_010581.1 1752184 1752260 R tRNA-Pro complement(1752184..1752260) Beijerinckia indica subsp. indica ATCC 9039 6200868 Bind_R0025 tRNA Bind_R0025 NC_010581.1 1764458 1764532 R tRNA-Glu complement(1764458..1764532) Beijerinckia indica subsp. indica ATCC 9039 6200865 Bind_R0026 tRNA Bind_R0026 NC_010581.1 1832129 1832213 R tRNA-Leu complement(1832129..1832213) Beijerinckia indica subsp. indica ATCC 9039 6199888 Bind_R0027 tRNA Bind_R0027 NC_010581.1 1899325 1899399 D tRNA-Val 1899325..1899399 Beijerinckia indica subsp. indica ATCC 9039 6201362 Bind_R0028 tRNA Bind_R0028 NC_010581.1 2021065 2021140 R tRNA-Lys complement(2021065..2021140) Beijerinckia indica subsp. indica ATCC 9039 6199238 Bind_R0029 tRNA Bind_R0029 NC_010581.1 2069942 2070017 R tRNA-Thr complement(2069942..2070017) Beijerinckia indica subsp. indica ATCC 9039 6200770 Bind_R0030 tRNA Bind_R0030 NC_010581.1 2137115 2137208 D tRNA-Ser 2137115..2137208 Beijerinckia indica subsp. indica ATCC 9039 6199595 Bind_R0031 tRNA Bind_R0031 NC_010581.1 2159952 2160025 R tRNA-Gln complement(2159952..2160025) Beijerinckia indica subsp. indica ATCC 9039 6198642 Bind_R0032 tRNA Bind_R0032 NC_010581.1 2391610 2391696 R tRNA-Leu complement(2391610..2391696) Beijerinckia indica subsp. indica ATCC 9039 6200375 Bind_R0033 tRNA Bind_R0033 NC_010581.1 2422185 2422259 D tRNA-Gln 2422185..2422259 Beijerinckia indica subsp. indica ATCC 9039 6201296 Bind_R0034 tRNA Bind_R0034 NC_010581.1 2438581 2438654 R tRNA-Cys complement(2438581..2438654) Beijerinckia indica subsp. indica ATCC 9039 6200485 Bind_R0035 tRNA Bind_R0035 NC_010581.1 2438863 2438938 D tRNA-Asn 2438863..2438938 Beijerinckia indica subsp. indica ATCC 9039 6200722 Bind_R0036 tRNA Bind_R0036 NC_010581.1 2491738 2491813 R tRNA-Val complement(2491738..2491813) Beijerinckia indica subsp. indica ATCC 9039 6199951 Bind_R0037 tRNA Bind_R0037 NC_010581.1 2499428 2499512 R tRNA-Leu complement(2499428..2499512) Beijerinckia indica subsp. indica ATCC 9039 6200496 Bind_R0038 tRNA Bind_R0038 NC_010581.1 2623895 2623984 R tRNA-Ser complement(2623895..2623984) Beijerinckia indica subsp. indica ATCC 9039 6200934 Bind_R0040 tRNA Bind_R0040 NC_010581.1 2740809 2740885 R tRNA-Asp complement(2740809..2740885) Beijerinckia indica subsp. indica ATCC 9039 6201189 Bind_R0041 tRNA Bind_R0041 NC_010581.1 2763263 2763339 R tRNA-Pro complement(2763263..2763339) Beijerinckia indica subsp. indica ATCC 9039 6200284 Bind_R0042 tRNA Bind_R0042 NC_010581.1 2869646 2869721 D tRNA-Thr 2869646..2869721 Beijerinckia indica subsp. indica ATCC 9039 6200227 Bind_R0043 tRNA Bind_R0043 NC_010581.1 3051419 3051495 R tRNA-Met complement(3051419..3051495) Beijerinckia indica subsp. indica ATCC 9039 6200023 Bind_R0044 tRNA Bind_R0044 NC_010581.1 3100608 3100682 D tRNA-Thr 3100608..3100682 Beijerinckia indica subsp. indica ATCC 9039 6199639 Bind_R0045 tRNA Bind_R0045 NC_010581.1 3178766 3178840 R tRNA-Gly complement(3178766..3178840) Beijerinckia indica subsp. indica ATCC 9039 6201456 Bind_R0046 tRNA Bind_R0046 NC_010581.1 3289472 3289547 D tRNA-Ala 3289472..3289547 Beijerinckia indica subsp. indica ATCC 9039 6198350 Bind_R0047 tRNA Bind_R0047 NC_010581.1 3352815 3352890 D tRNA-Ala 3352815..3352890 Beijerinckia indica subsp. indica ATCC 9039 6198357 Bind_R0048 tRNA Bind_R0048 NC_010581.1 3414330 3414406 R tRNA-Met complement(3414330..3414406) Beijerinckia indica subsp. indica ATCC 9039 6198277 Bind_R0051 tRNA Bind_R0051 NC_010581.1 3417989 3418064 R tRNA-Ala complement(3417989..3418064) Beijerinckia indica subsp. indica ATCC 9039 6198266 Bind_R0052 tRNA Bind_R0052 NC_010581.1 3418215 3418291 R tRNA-Ile complement(3418215..3418291) Beijerinckia indica subsp. indica ATCC 9039 6198267 Bind_R0054 tRNA Bind_R0054 NC_010581.1 3529643 3529719 R tRNA-Arg complement(3529643..3529719) Beijerinckia indica subsp. indica ATCC 9039 6200051 Bind_R0055 tRNA Bind_R0055 NC_010581.1 3610522 3610598 D tRNA-Arg 3610522..3610598 Beijerinckia indica subsp. indica ATCC 9039 6200156 Bind_R0056 tRNA Bind_R0056 NC_010581.1 3660107 3660181 R tRNA-Val complement(3660107..3660181) Beijerinckia indica subsp. indica ATCC 9039 6200160 Bind_R0057 tRNA Bind_R0057 NC_010581.1 3830838 3830915 R tRNA-Pro complement(3830838..3830915) Beijerinckia indica subsp. indica ATCC 9039 6199079 Bind_R0058 tRNA Bind_R0058 NC_010581.1 3927990 3928066 R tRNA-Met complement(3927990..3928066) Beijerinckia indica subsp. indica ATCC 9039 6201468 Bind_R0061 tRNA Bind_R0061 NC_010581.1 3931659 3931734 R tRNA-Ala complement(3931659..3931734) Beijerinckia indica subsp. indica ATCC 9039 6201179 Bind_R0062 tRNA Bind_R0062 NC_010581.1 3931864 3931940 R tRNA-Ile complement(3931864..3931940) Beijerinckia indica subsp. indica ATCC 9039 6201772 Bind_R0065 tRNA Bind_R0065 NC_010581.1 3968737 3968812 R tRNA-Met complement(3968737..3968812) Beijerinckia indica subsp. indica ATCC 9039 6200644 Bind_R0066 tRNA Bind_R0066 NC_010581.1 4009736 4009812 R tRNA-Arg complement(4009736..4009812) Beijerinckia indica subsp. indica ATCC 9039 6200615 Bind_R0005 rRNA Bind_R0005 NC_010581.1 680554 682033 D 16S ribosomal RNA 680554..682033 Beijerinckia indica subsp. indica ATCC 9039 6199451 Bind_R0008 rRNA Bind_R0008 NC_010581.1 683062 685730 D 23S ribosomal RNA 683062..685730 Beijerinckia indica subsp. indica ATCC 9039 6200014 Bind_R0009 rRNA Bind_R0009 NC_010581.1 685912 686026 D 5S ribosomal RNA 685912..686026 Beijerinckia indica subsp. indica ATCC 9039 6200013 Bind_R0049 rRNA Bind_R0049 NC_010581.1 3414473 3414587 R 5S ribosomal RNA complement(3414473..3414587) Beijerinckia indica subsp. indica ATCC 9039 6198278 Bind_R0050 rRNA Bind_R0050 NC_010581.1 3414769 3417586 R 23S ribosomal RNA complement(3414769..3417586) Beijerinckia indica subsp. indica ATCC 9039 6198274 Bind_R0053 rRNA Bind_R0053 NC_010581.1 3418477 3419956 R 16S ribosomal RNA complement(3418477..3419956) Beijerinckia indica subsp. indica ATCC 9039 6198260 Bind_R0059 rRNA Bind_R0059 NC_010581.1 3928133 3928247 R 5S ribosomal RNA complement(3928133..3928247) Beijerinckia indica subsp. indica ATCC 9039 6201469 Bind_R0060 rRNA Bind_R0060 NC_010581.1 3928429 3931097 R 23S ribosomal RNA complement(3928429..3931097) Beijerinckia indica subsp. indica ATCC 9039 6201178 Bind_R0063 rRNA Bind_R0063 NC_010581.1 3932126 3933605 R 16S ribosomal RNA complement(3932126..3933605) Beijerinckia indica subsp. indica ATCC 9039 6201617 Bind_R0064 rRNA Bind_R0064 NC_010581.1 3946313 3946467 D 6S ribosomal RNA 3946313..3946467 Beijerinckia indica subsp. indica ATCC 9039 6201698