-- dump date 20140619_001428 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001830894.1 182676786 6197926 580..1509 1 NC_010578.1 KEGG: gdi:GDI2531 hypothetical protein; hypothetical protein 1509 6197926 Bind_3876 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830894.1 580 D 395963 CDS YP_001830895.1 182676787 6197925 complement(1664..2749) 1 NC_010578.1 PFAM: glycosyl transferase family 9; KEGG: ppd:Ppro_2100 glycosyl transferase, family 9; glycosyl transferase family protein 2749 6197925 Bind_3877 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001830895.1 1664 R 395963 CDS YP_001830896.1 182676788 6197924 complement(2746..4068) 1 NC_010578.1 KEGG: rxy:Rxyl_0561 polysaccharide biosynthesis protein; O-antigen and teichoic acid-like export protein 4068 6197924 Bind_3878 Beijerinckia indica subsp. indica ATCC 9039 O-antigen and teichoic acid-like export protein YP_001830896.1 2746 R 395963 CDS YP_001830897.1 182676789 6197923 complement(4226..5533) 1 NC_010578.1 PFAM: glycosyl transferase group 1; KEGG: mva:Mvan_1684 glycosyl transferase, group 1; glycosyl transferase group 1 5533 6197923 Bind_3879 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase group 1 YP_001830897.1 4226 R 395963 CDS YP_001830898.1 182676790 6197922 6066..6209 1 NC_010578.1 hypothetical protein 6209 6197922 Bind_3880 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830898.1 6066 D 395963 CDS YP_001830899.1 182676791 6197921 6437..7507 1 NC_010578.1 PFAM: acyltransferase 3; KEGG: rle:RL0234 exopolysaccharide production protein ExoZ; acyltransferase 3 7507 6197921 Bind_3881 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001830899.1 6437 D 395963 CDS YP_001830900.1 182676792 6197920 complement(7998..10337) 1 NC_010578.1 TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase 10337 6197920 Bind_3882 Beijerinckia indica subsp. indica ATCC 9039 exopolysaccharide tyrosine-protein kinase YP_001830900.1 7998 R 395963 CDS YP_001830901.1 182676793 6197919 10906..12132 1 NC_010578.1 KEGG: rle:RL3831 putative O-acetyl transferase; putative O-acetyl transferase 12132 6197919 Bind_3883 Beijerinckia indica subsp. indica ATCC 9039 putative O-acetyl transferase YP_001830901.1 10906 D 395963 CDS YP_001830902.1 182676794 6197918 12727..14580 1 NC_010578.1 PFAM: Heparinase II/III family protein; KEGG: mva:Mvan_1686 heparinase II/III family protein; heparinase II/III family protein 14580 6197918 Bind_3884 Beijerinckia indica subsp. indica ATCC 9039 heparinase II/III family protein YP_001830902.1 12727 D 395963 CDS YP_001830903.1 182676795 6197917 complement(14689..15951) 1 NC_010578.1 KEGG: bja:blr6296 probable GDP-mannose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 15951 6197917 Bind_3885 Beijerinckia indica subsp. indica ATCC 9039 nucleotide sugar dehydrogenase YP_001830903.1 14689 R 395963 CDS YP_001830904.1 182676796 6197915 17753..18970 1 NC_010578.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_PA00180 plasmid partitioning protein RepAa1; cobyrinic acid ac-diamide synthase 18970 6197915 Bind_3887 Beijerinckia indica subsp. indica ATCC 9039 cobyrinic acid ac-diamide synthase YP_001830904.1 17753 D 395963 CDS YP_001830905.1 182676797 6197914 18967..20076 1 NC_010578.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ret:RHE_PA00181 plasmid partitioning protein RepBa1; parB-like partition protein 20076 6197914 Bind_3888 Beijerinckia indica subsp. indica ATCC 9039 parB-like partition protein YP_001830905.1 18967 D 395963 CDS YP_001830906.1 182676798 6197913 20270..20704 1 NC_010578.1 KEGG: gox:GOX2551 hypothetical protein; hypothetical protein 20704 6197913 Bind_3889 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830906.1 20270 D 395963 CDS YP_001830907.1 182676799 6197912 complement(21264..22511) 1 NC_010578.1 KEGG: rpa:pRPA1 replication protein; replication protein 22511 6197912 Bind_3890 Beijerinckia indica subsp. indica ATCC 9039 replication protein YP_001830907.1 21264 R 395963 CDS YP_001830908.1 182676800 6197911 complement(22914..24491) 1 NC_010578.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: azc:AZC_3075 acetyl-CoA carboxylase; acetyl-CoA carboxylase, biotin carboxylase 24491 6197911 Bind_3891 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA carboxylase, biotin carboxylase YP_001830908.1 22914 R 395963 CDS YP_001830909.1 182676801 6197910 complement(24719..25777) 1 NC_010578.1 PFAM: secretion protein HlyD family protein; KEGG: rpe:RPE_3322 secretion protein HlyD family protein; secretion protein HlyD family protein 25777 6197910 Bind_3892 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001830909.1 24719 R 395963 CDS YP_001830910.1 182676802 6197909 complement(25774..26502) 1 NC_010578.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_3321 ABC transporter related; ABC transporter related 26502 6197909 Bind_3893 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter related YP_001830910.1 25774 R 395963 CDS YP_001830911.1 182676803 6197908 complement(26499..27707) 1 NC_010578.1 PFAM: protein of unknown function DUF214; KEGG: rpe:RPE_3320 protein of unknown function DUF214; hypothetical protein 27707 6197908 Bind_3894 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830911.1 26499 R 395963 CDS YP_001830912.1 182676804 6197907 complement(27966..29342) 1 NC_010578.1 PFAM: glycosyl transferase group 1; KEGG: mta:Moth_1853 glycosyl transferase, group 1; glycosyl transferase group 1 29342 6197907 Bind_3895 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase group 1 YP_001830912.1 27966 R 395963 CDS YP_001830913.1 182676805 6197906 complement(29474..31363) 1 NC_010578.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sus:Acid_1973 beta-ketoacyl synthase; 4'-phosphopantetheinyl transferase 31363 6197906 Bind_3896 Beijerinckia indica subsp. indica ATCC 9039 4'-phosphopantetheinyl transferase YP_001830913.1 29474 R 395963 CDS YP_001830914.1 182676806 6197905 complement(31406..32626) 1 NC_010578.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: cph:Cpha266_1099 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C-terminal domain protein; chalcone/stilbene synthase domain-containing protein 32626 6197905 Bind_3897 Beijerinckia indica subsp. indica ATCC 9039 chalcone/stilbene synthase domain-containing protein YP_001830914.1 31406 R 395963 CDS YP_001830915.1 182676807 6197903 complement(33187..34407) 1 NC_010578.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: cph:Cpha266_1099 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III C-terminal domain protein; chalcone/stilbene synthase domain-containing protein 34407 6197903 Bind_3899 Beijerinckia indica subsp. indica ATCC 9039 chalcone/stilbene synthase domain-containing protein YP_001830915.1 33187 R 395963 CDS YP_001830916.1 182676808 6197902 complement(34444..42468) 1 NC_010578.1 PFAM: short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase NPD; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sus:Acid_1972 beta-ketoacyl synthase; erythronolide synthase 42468 6197902 Bind_3900 Beijerinckia indica subsp. indica ATCC 9039 erythronolide synthase YP_001830916.1 34444 R 395963 CDS YP_001830917.1 182676809 6197901 43665..43868 1 NC_010578.1 hypothetical protein 43868 6197901 Bind_3901 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830917.1 43665 D 395963 CDS YP_001830918.1 182676810 6197900 44081..44350 1 NC_010578.1 hypothetical protein 44350 6197900 Bind_3902 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830918.1 44081 D 395963 CDS YP_001830919.1 182676811 6197899 44364..44780 1 NC_010578.1 hypothetical protein 44780 6197899 Bind_3903 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830919.1 44364 D 395963 CDS YP_001830920.1 182676812 6197898 45462..47108 1 NC_010578.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1351 steroid monooxygenase; FAD dependent oxidoreductase 47108 6197898 Bind_3904 Beijerinckia indica subsp. indica ATCC 9039 FAD dependent oxidoreductase YP_001830920.1 45462 D 395963 CDS YP_001830921.1 182676813 6197897 47198..48391 1 NC_010578.1 PFAM: beta-lactamase; KEGG: dsh:Dshi_2284 beta-lactamase; beta-lactamase 48391 6197897 Bind_3905 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase YP_001830921.1 47198 D 395963 CDS YP_001830922.1 182676814 6197896 complement(48545..50587) 1 NC_010578.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_1337 GAF modulated sigma54 specific transcriptional regulator, fis family; sigma-54 factor interaction domain-containing protein 50587 6197896 Bind_3906 Beijerinckia indica subsp. indica ATCC 9039 sigma-54 factor interaction domain-containing protein YP_001830922.1 48545 R 395963 CDS YP_001830923.1 182676815 6197895 complement(51254..51892) 1 NC_010578.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_0612 transcriptional regulator, TetR family; regulatory protein TetR 51892 6197895 Bind_3907 Beijerinckia indica subsp. indica ATCC 9039 regulatory protein TetR YP_001830923.1 51254 R 395963 CDS YP_001830924.1 182676816 6197893 52727..53650 1 NC_010578.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: osa:4324493 Os01g0151700; short-chain dehydrogenase/reductase SDR 53650 6197893 Bind_3909 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001830924.1 52727 D 395963 CDS YP_001830925.1 182676817 6197891 complement(55063..55344) 1 NC_010578.1 hypothetical protein 55344 6197891 Bind_3911 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830925.1 55063 R 395963 CDS YP_001830926.1 182676818 6197890 complement(55697..57124) 1 NC_010578.1 KEGG: bvi:Bcep1808_6395 hypothetical protein; hypothetical protein 57124 6197890 Bind_3912 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830926.1 55697 R 395963 CDS YP_001830927.1 182676819 6197889 complement(58108..59532) 1 NC_010578.1 KEGG: rsq:Rsph17025_2588 Ig family protein; hypothetical protein 59532 6197889 Bind_3913 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830927.1 58108 R 395963 CDS YP_001830928.1 182676820 6197888 60316..61548 1 NC_010578.1 PFAM: acyltransferase 3; KEGG: cak:Caul_3692 acyltransferase 3; acyltransferase 3 61548 6197888 Bind_3914 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001830928.1 60316 D 395963 CDS YP_001830929.1 182676821 6197887 complement(61700..63064) 1 NC_010578.1 KEGG: shn:Shewana3_1383 hypothetical protein; hypothetical protein 63064 6197887 Bind_3915 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830929.1 61700 R 395963 CDS YP_001830930.1 182676822 6197886 complement(63117..63254) 1 NC_010578.1 hypothetical protein 63254 6197886 Bind_3916 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830930.1 63117 R 395963 CDS YP_001830931.1 182676823 6197885 complement(63349..64491) 1 NC_010578.1 PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1473 hypothetical protein; glycosyl transferase group 1 64491 6197885 Bind_3917 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase group 1 YP_001830931.1 63349 R 395963 CDS YP_001830932.1 182676824 6197884 65181..66692 1 NC_010578.1 hypothetical protein 66692 6197884 Bind_3918 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830932.1 65181 D 395963 CDS YP_001830973.1 182676826 6197938 46..585 1 NC_010580.1 KEGG: gox:GOX2635 hypothetical protein; hypothetical protein 585 6197938 Bind_3677 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830973.1 46 D 395963 CDS YP_001830974.1 182676827 6198054 578..1543 1 NC_010580.1 KEGG: gox:GOX2636 DotC; DotC 1543 6198054 Bind_3678 Beijerinckia indica subsp. indica ATCC 9039 DotC YP_001830974.1 578 D 395963 CDS YP_001830975.1 182676828 6197942 1540..2682 1 NC_010580.1 PFAM: type II secretion system protein E; KEGG: gox:GOX2639 twitching motility protein PilT; type II secretion system protein E 2682 6197942 Bind_3679 Beijerinckia indica subsp. indica ATCC 9039 type II secretion system protein E YP_001830975.1 1540 D 395963 CDS YP_001830976.1 182676829 6197930 2682..2930 1 NC_010580.1 KEGG: gox:GOX2640 IcmT; IcmT 2930 6197930 Bind_3680 Beijerinckia indica subsp. indica ATCC 9039 IcmT YP_001830976.1 2682 D 395963 CDS YP_001830977.1 182676830 6197941 2927..3355 1 NC_010580.1 hypothetical protein 3355 6197941 Bind_3681 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830977.1 2927 D 395963 CDS YP_001830978.1 182676831 6197940 3364..3876 1 NC_010580.1 PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7655 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 3876 6197940 Bind_3682 Beijerinckia indica subsp. indica ATCC 9039 lytic transglycosylase catalytic YP_001830978.1 3364 D 395963 CDS YP_001830979.1 182676832 6197999 3876..5024 1 NC_010580.1 KEGG: gox:GOX2637 hypothetical protein; hypothetical protein 5024 6197999 Bind_3683 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830979.1 3876 D 395963 CDS YP_001830980.1 182676833 6198048 5039..5578 1 NC_010580.1 hypothetical protein 5578 6198048 Bind_3684 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830980.1 5039 D 395963 CDS YP_001830981.1 182676834 6197928 5588..5854 1 NC_010580.1 KEGG: oan:Oant_1559 hypothetical protein; hypothetical protein 5854 6197928 Bind_3685 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830981.1 5588 D 395963 CDS YP_001830982.1 182676835 6197932 5886..8246 1 NC_010580.1 KEGG: gox:GOX2641 DotL; DotL 8246 6197932 Bind_3686 Beijerinckia indica subsp. indica ATCC 9039 DotL YP_001830982.1 5886 D 395963 CDS YP_001830983.1 182676836 6198020 8344..8592 1 NC_010580.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_4837 prevent-host-death family protein; prevent-host-death family protein 8592 6198020 Bind_3687 Beijerinckia indica subsp. indica ATCC 9039 prevent-host-death family protein YP_001830983.1 8344 D 395963 CDS YP_001830984.1 182676837 6197933 8582..8869 1 NC_010580.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: bam:Bamb_4836 addiction module toxin, RelE/StbE family; addiction module antitoxin 8869 6197933 Bind_3688 Beijerinckia indica subsp. indica ATCC 9039 addiction module antitoxin YP_001830984.1 8582 D 395963 CDS YP_001830985.1 182676838 6198017 9808..10167 1 NC_010580.1 hypothetical protein 10167 6198017 Bind_3689 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830985.1 9808 D 395963 CDS YP_001830986.1 182676839 6197936 complement(10218..11063) 1 NC_010580.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cak:Caul_2656 transcriptional regulator, LysR family; LysR family transcriptional regulator 11063 6197936 Bind_3690 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001830986.1 10218 R 395963 CDS YP_001830987.1 182676840 6197937 11154..11570 1 NC_010580.1 KEGG: xau:Xaut_1169 4-oxalocrotonate tautomerase; hypothetical protein 11570 6197937 Bind_3691 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830987.1 11154 D 395963 CDS YP_001830988.1 182676841 6197927 complement(11638..14844) 1 NC_010580.1 PFAM: TrwC relaxase; SMART: AAA ATPase; KEGG: gox:GOX2642 conjugal transfer protein TraA; TrwC relaxase 14844 6197927 Bind_3692 Beijerinckia indica subsp. indica ATCC 9039 TrwC relaxase YP_001830988.1 11638 R 395963 CDS YP_001830989.1 182676842 6198091 complement(14841..15140) 1 NC_010580.1 hypothetical protein 15140 6198091 Bind_3693 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830989.1 14841 R 395963 CDS YP_001830990.1 182676843 6197934 15688..16098 1 NC_010580.1 hypothetical protein 16098 6197934 Bind_3694 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830990.1 15688 D 395963 CDS YP_001830991.1 182676844 6197929 16129..24864 1 NC_010580.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Hemolysin-type calcium-binding region; Proprotein convertase P; Haemolysin-type calcium binding domain protein; KEGG: pol:Bpro_4929 hemolysin-type calcium-binding region; proprotein convertase P 24864 6197929 Bind_3695 Beijerinckia indica subsp. indica ATCC 9039 proprotein convertase P YP_001830991.1 16129 D 395963 CDS YP_001830992.1 182676845 6197935 24960..27122 1 NC_010580.1 KEGG: smd:Smed_0884 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 27122 6197935 Bind_3696 Beijerinckia indica subsp. indica ATCC 9039 type I secretion system ATPase YP_001830992.1 24960 D 395963 CDS YP_001830993.1 182676846 6197939 27119..28564 1 NC_010580.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_0883 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 28564 6197939 Bind_3697 Beijerinckia indica subsp. indica ATCC 9039 HlyD family type I secretion membrane fusion protein YP_001830993.1 27119 D 395963 CDS YP_001830994.1 182676847 6197931 complement(28835..29197) 1 NC_010580.1 PFAM: BRO domain protein; KEGG: ecv:APECO1_4056 putative anti-repressor protein; prophage antirepressor 29197 6197931 Bind_3698 Beijerinckia indica subsp. indica ATCC 9039 prophage antirepressor YP_001830994.1 28835 R 395963 CDS YP_001830995.1 182676848 6198125 29603..30187 1 NC_010580.1 KEGG: acr:Acry_3544 hypothetical protein; hypothetical protein 30187 6198125 Bind_3699 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830995.1 29603 D 395963 CDS YP_001830996.1 182676849 6198124 30201..30986 1 NC_010580.1 KEGG: gox:GOX2663 hypothetical protein; hypothetical protein 30986 6198124 Bind_3700 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830996.1 30201 D 395963 CDS YP_001830997.1 182676850 6198123 30959..31963 1 NC_010580.1 KEGG: acr:Acry_3545 hypothetical protein; hypothetical protein 31963 6198123 Bind_3701 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830997.1 30959 D 395963 CDS YP_001830998.1 182676851 6198122 31956..32573 1 NC_010580.1 hypothetical protein 32573 6198122 Bind_3702 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830998.1 31956 D 395963 CDS YP_001830999.1 182676852 6198121 32686..33387 1 NC_010580.1 KEGG: bxe:Bxe_B1040 hypothetical protein; hypothetical protein 33387 6198121 Bind_3703 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001830999.1 32686 D 395963 CDS YP_001831000.1 182676853 6198120 33371..33709 1 NC_010580.1 hypothetical protein 33709 6198120 Bind_3704 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831000.1 33371 D 395963 CDS YP_001831001.1 182676854 6198119 33800..34690 1 NC_010580.1 KEGG: gox:GOX2604 hypothetical protein; hypothetical protein 34690 6198119 Bind_3705 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831001.1 33800 D 395963 CDS YP_001831002.1 182676855 6198118 34705..35100 1 NC_010580.1 hypothetical protein 35100 6198118 Bind_3706 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831002.1 34705 D 395963 CDS YP_001831003.1 182676856 6198117 35259..35504 1 NC_010580.1 PFAM: Rv0623 family protein transcription factor; KEGG: bbt:BBta_p0292 hypothetical protein; transcription factor 35504 6198117 Bind_3707 Beijerinckia indica subsp. indica ATCC 9039 transcription factor YP_001831003.1 35259 D 395963 CDS YP_001831004.1 182676857 6198116 35504..35902 1 NC_010580.1 PFAM: PilT protein domain protein; KEGG: bbt:BBta_p0291 hypothetical protein; PilT domain-containing protein 35902 6198116 Bind_3708 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001831004.1 35504 D 395963 CDS YP_001831005.1 182676858 6198115 36023..36265 1 NC_010580.1 KEGG: nha:Nham_2476 hypothetical protein; hypothetical protein 36265 6198115 Bind_3709 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831005.1 36023 D 395963 CDS YP_001831006.1 182676859 6198114 complement(36323..36493) 1 NC_010580.1 hypothetical protein 36493 6198114 Bind_3710 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831006.1 36323 R 395963 CDS YP_001831007.1 182676860 6198113 complement(36577..36903) 1 NC_010580.1 PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_4988 protein of unknown function DUF736; hypothetical protein 36903 6198113 Bind_3711 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831007.1 36577 R 395963 CDS YP_001831008.1 182676861 6198112 complement(36854..37480) 1 NC_010580.1 KEGG: hsa:645586 hypothetical LOC645586; hypothetical protein 37480 6198112 Bind_3712 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831008.1 36854 R 395963 CDS YP_001831009.1 182676862 6198111 complement(37587..38006) 1 NC_010580.1 hypothetical protein 38006 6198111 Bind_3713 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831009.1 37587 R 395963 CDS YP_001831010.1 182676863 6198110 complement(38096..38281) 1 NC_010580.1 hypothetical protein 38281 6198110 Bind_3714 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831010.1 38096 R 395963 CDS YP_001831011.1 182676864 6198109 complement(38374..38691) 1 NC_010580.1 PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_4988 protein of unknown function DUF736; hypothetical protein 38691 6198109 Bind_3715 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831011.1 38374 R 395963 CDS YP_001831012.1 182676865 6198108 complement(39493..39726) 1 NC_010580.1 hypothetical protein 39726 6198108 Bind_3716 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831012.1 39493 R 395963 CDS YP_001831013.1 182676866 6198107 complement(39773..40366) 1 NC_010580.1 PFAM: protein of unknown function DUF820; KEGG: tth:TTC0860 hypothetical protein; hypothetical protein 40366 6198107 Bind_3717 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831013.1 39773 R 395963 CDS YP_001831014.1 182676867 6198106 complement(40420..40791) 1 NC_010580.1 hypothetical protein 40791 6198106 Bind_3718 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831014.1 40420 R 395963 CDS YP_001831015.1 182676868 6198105 complement(40861..41031) 1 NC_010580.1 hypothetical protein 41031 6198105 Bind_3719 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831015.1 40861 R 395963 CDS YP_001831016.1 182676869 6198104 complement(41112..41711) 1 NC_010580.1 KEGG: rle:pRL80110 hypothetical protein; hypothetical protein 41711 6198104 Bind_3720 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831016.1 41112 R 395963 CDS YP_001831017.1 182676870 6198103 42705..43283 1 NC_010580.1 hypothetical protein 43283 6198103 Bind_3721 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831017.1 42705 D 395963 CDS YP_001831018.1 182676871 6198102 complement(43333..43887) 1 NC_010580.1 KEGG: sal:Sala_2655 hypothetical protein; hypothetical protein 43887 6198102 Bind_3722 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831018.1 43333 R 395963 CDS YP_001831019.1 182676872 6198101 complement(44013..44210) 1 NC_010580.1 hypothetical protein 44210 6198101 Bind_3723 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831019.1 44013 R 395963 CDS YP_001831020.1 182676873 6198100 complement(44264..44485) 1 NC_010580.1 hypothetical protein 44485 6198100 Bind_3724 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831020.1 44264 R 395963 CDS YP_001831021.1 182676874 6198099 complement(44508..44867) 1 NC_010580.1 hypothetical protein 44867 6198099 Bind_3725 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831021.1 44508 R 395963 CDS YP_001831022.1 182676875 6198098 complement(44946..45140) 1 NC_010580.1 KEGG: bbt:BBta_7714 hypothetical protein; hypothetical protein 45140 6198098 Bind_3726 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831022.1 44946 R 395963 CDS YP_001831023.1 182676876 6198097 complement(45116..45556) 1 NC_010580.1 hypothetical protein 45556 6198097 Bind_3727 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831023.1 45116 R 395963 CDS YP_001831024.1 182676877 6198096 complement(45557..45823) 1 NC_010580.1 hypothetical protein 45823 6198096 Bind_3728 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831024.1 45557 R 395963 CDS YP_001831025.1 182676878 6198095 complement(45858..47555) 1 NC_010580.1 ParB family; plasmid partitioning protein 47555 6198095 Bind_3729 Beijerinckia indica subsp. indica ATCC 9039 plasmid partitioning protein YP_001831025.1 45858 R 395963 CDS YP_001831026.1 182676879 6198093 complement(48400..48960) 1 NC_010580.1 KEGG: gox:GOX2530 hypothetical protein; hypothetical protein 48960 6198093 Bind_3731 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831026.1 48400 R 395963 CDS YP_001831027.1 182676880 6198092 complement(49061..54142) 1 NC_010580.1 PFAM: helicase domain protein; KEGG: gox:GOX2542 DNA methylase; helicase domain-containing protein 54142 6198092 Bind_3732 Beijerinckia indica subsp. indica ATCC 9039 helicase domain-containing protein YP_001831027.1 49061 R 395963 CDS YP_001831028.1 182676881 6198090 complement(54228..54620) 1 NC_010580.1 hypothetical protein 54620 6198090 Bind_3733 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831028.1 54228 R 395963 CDS YP_001831029.1 182676882 6198089 complement(54624..54950) 1 NC_010580.1 hypothetical protein 54950 6198089 Bind_3734 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831029.1 54624 R 395963 CDS YP_001831030.1 182676883 6198088 complement(55225..55566) 1 NC_010580.1 hypothetical protein 55566 6198088 Bind_3735 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831030.1 55225 R 395963 CDS YP_001831031.1 182676884 6198087 complement(55665..55952) 1 NC_010580.1 hypothetical protein 55952 6198087 Bind_3736 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831031.1 55665 R 395963 CDS YP_001831032.1 182676885 6198086 complement(56028..56567) 1 NC_010580.1 KEGG: dol:Dole_3186 CO dehydrogenase/acetyl-CoA synthase delta subunit; hypothetical protein 56567 6198086 Bind_3737 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831032.1 56028 R 395963 CDS YP_001831033.1 182676886 6198085 complement(56800..56949) 1 NC_010580.1 hypothetical protein 56949 6198085 Bind_3738 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831033.1 56800 R 395963 CDS YP_001831034.1 182676887 6198084 complement(56984..57118) 1 NC_010580.1 hypothetical protein 57118 6198084 Bind_3739 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831034.1 56984 R 395963 CDS YP_001831035.1 182676888 6198083 complement(57207..57479) 1 NC_010580.1 hypothetical protein 57479 6198083 Bind_3740 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831035.1 57207 R 395963 CDS YP_001831036.1 182676889 6198082 complement(57681..57950) 1 NC_010580.1 hypothetical protein 57950 6198082 Bind_3741 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831036.1 57681 R 395963 CDS YP_001831037.1 182676890 6198080 complement(58763..58933) 1 NC_010580.1 hypothetical protein 58933 6198080 Bind_3743 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831037.1 58763 R 395963 CDS YP_001831038.1 182676891 6198079 complement(58930..59292) 1 NC_010580.1 KEGG: nha:Nham_2399 hypothetical protein; hypothetical protein 59292 6198079 Bind_3744 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831038.1 58930 R 395963 CDS YP_001831039.1 182676892 6198078 complement(59289..59495) 1 NC_010580.1 hypothetical protein 59495 6198078 Bind_3745 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831039.1 59289 R 395963 CDS YP_001831040.1 182676893 6198077 complement(59506..61698) 1 NC_010580.1 PFAM: UvrD/REP helicase; KEGG: gox:GOX2523 DNA helicase II UvrD; UvrD/REP helicase 61698 6198077 Bind_3746 Beijerinckia indica subsp. indica ATCC 9039 UvrD/REP helicase YP_001831040.1 59506 R 395963 CDS YP_001831041.1 182676894 6198076 complement(61878..62198) 1 NC_010580.1 hypothetical protein 62198 6198076 Bind_3747 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831041.1 61878 R 395963 CDS YP_001831042.1 182676895 6198075 complement(62195..63139) 1 NC_010580.1 KEGG: gox:GOX2525 hypothetical protein; hypothetical protein 63139 6198075 Bind_3748 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831042.1 62195 R 395963 CDS YP_001831043.1 182676896 6198074 complement(63136..63528) 1 NC_010580.1 KEGG: rno:684340 hypothetical protein; hypothetical protein 63528 6198074 Bind_3749 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831043.1 63136 R 395963 CDS YP_001831044.1 182676897 6198073 63770..64204 1 NC_010580.1 KEGG: nar:Saro_3916 WGR domain protein; hypothetical protein 64204 6198073 Bind_3750 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831044.1 63770 D 395963 CDS YP_001831045.1 182676898 6198072 64255..64704 1 NC_010580.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24 and S26 domain protein; peptidase S24/S26 domain-containing protein 64704 6198072 Bind_3751 Beijerinckia indica subsp. indica ATCC 9039 peptidase S24/S26 domain-containing protein YP_001831045.1 64255 D 395963 CDS YP_001831046.1 182676899 6198071 64704..65966 1 NC_010580.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mex:Mext_3517 DNA-directed DNA polymerase; DNA-directed DNA polymerase 65966 6198071 Bind_3752 Beijerinckia indica subsp. indica ATCC 9039 DNA-directed DNA polymerase YP_001831046.1 64704 D 395963 CDS YP_001831047.1 182676900 6198070 complement(66033..66743) 1 NC_010580.1 hypothetical protein 66743 6198070 Bind_3753 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831047.1 66033 R 395963 CDS YP_001831048.1 182676901 6198069 complement(66740..67384) 1 NC_010580.1 KEGG: pla:Plav_0032 cobyrinic acid ac-diamide synthase; hypothetical protein 67384 6198069 Bind_3754 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831048.1 66740 R 395963 CDS YP_001831049.1 182676902 6198065 69815..70114 1 NC_010580.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: xau:Xaut_4999 addiction module antitoxin, RelB/DinJ family; addiction module antitoxin 70114 6198065 Bind_3758 Beijerinckia indica subsp. indica ATCC 9039 addiction module antitoxin YP_001831049.1 69815 D 395963 CDS YP_001831050.1 182676903 6198064 70152..70391 1 NC_010580.1 PFAM: plasmid stabilization system; KEGG: ajs:Ajs_2238 addiction module toxin, RelE/StbE family; plasmid stabilization system protein 70391 6198064 Bind_3759 Beijerinckia indica subsp. indica ATCC 9039 plasmid stabilization system protein YP_001831050.1 70152 D 395963 CDS YP_001831051.1 182676904 6198063 70588..70944 1 NC_010580.1 hypothetical protein 70944 6198063 Bind_3760 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831051.1 70588 D 395963 CDS YP_001831052.1 182676905 6198061 complement(71869..73326) 1 NC_010580.1 KEGG: mlo:mlr6204 hypothetical protein; hypothetical protein 73326 6198061 Bind_3762 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831052.1 71869 R 395963 CDS YP_001831053.1 182676906 6198060 complement(73316..74650) 1 NC_010580.1 KEGG: mlo:mlr6203 hypothetical protein; hypothetical protein 74650 6198060 Bind_3763 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831053.1 73316 R 395963 CDS YP_001831054.1 182676907 6198059 74987..75784 1 NC_010580.1 KEGG: nha:Nham_1149 hypothetical protein; hypothetical protein 75784 6198059 Bind_3764 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831054.1 74987 D 395963 CDS YP_001831055.1 182676908 6198058 75777..79088 1 NC_010580.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: fjo:Fjoh_3576 DEAD/DEAH box helicase domain protein; helicase domain-containing protein 79088 6198058 Bind_3765 Beijerinckia indica subsp. indica ATCC 9039 helicase domain-containing protein YP_001831055.1 75777 D 395963 CDS YP_001831056.1 182676909 6198057 complement(79470..79715) 1 NC_010580.1 hypothetical protein 79715 6198057 Bind_3766 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831056.1 79470 R 395963 CDS YP_001831057.1 182676910 6198056 complement(79777..80442) 1 NC_010580.1 KEGG: ajs:Ajs_2631 hypothetical protein; hypothetical protein 80442 6198056 Bind_3767 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831057.1 79777 R 395963 CDS YP_001831058.1 182676911 6198055 complement(80439..81545) 1 NC_010580.1 KEGG: ajs:Ajs_2630 hypothetical protein; hypothetical protein 81545 6198055 Bind_3768 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831058.1 80439 R 395963 CDS YP_001831059.1 182676912 6198053 complement(81565..82203) 1 NC_010580.1 KEGG: rfr:Rfer_1064 hypothetical protein; hypothetical protein 82203 6198053 Bind_3769 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831059.1 81565 R 395963 CDS YP_001831060.1 182676913 6198052 complement(82203..82670) 1 NC_010580.1 PFAM: Domain of unknown function DUF1863; KEGG: ajs:Ajs_2628 hypothetical protein; hypothetical protein 82670 6198052 Bind_3770 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831060.1 82203 R 395963 CDS YP_001831061.1 182676914 6198051 82979..84136 1 NC_010580.1 KEGG: sdn:Sden_3578 hypothetical protein; hypothetical protein 84136 6198051 Bind_3771 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831061.1 82979 D 395963 CDS YP_001831062.1 182676915 6198050 84124..84792 1 NC_010580.1 KEGG: pca:Pcar_2915 hypothetical protein; hypothetical protein 84792 6198050 Bind_3772 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831062.1 84124 D 395963 CDS YP_001831063.1 182676916 6198049 complement(84891..86063) 1 NC_010580.1 PFAM: integrase family protein; KEGG: sme:SMa2257 possible integrase-like protein; integrase family protein 86063 6198049 Bind_3773 Beijerinckia indica subsp. indica ATCC 9039 integrase family protein YP_001831063.1 84891 R 395963 CDS YP_001831064.1 182676917 6198047 complement(86060..86476) 1 NC_010580.1 PFAM: PilT protein domain protein; KEGG: smd:Smed_6500 PilT protein domain protein; PilT domain-containing protein 86476 6198047 Bind_3774 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001831064.1 86060 R 395963 CDS YP_001831065.1 182676918 6198046 complement(86476..86718) 1 NC_010580.1 TIGRFAM: prevent-host-death family protein; KEGG: rpa:RPA1834 hypothetical protein; prevent-host-death family protein 86718 6198046 Bind_3775 Beijerinckia indica subsp. indica ATCC 9039 prevent-host-death family protein YP_001831065.1 86476 R 395963 CDS YP_001831066.1 182676919 6198045 87016..87324 1 NC_010580.1 hypothetical protein 87324 6198045 Bind_3776 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831066.1 87016 D 395963 CDS YP_001831067.1 182676920 6198044 87321..88394 1 NC_010580.1 PFAM: protein of unknown function DUF1612; KEGG: nha:Nham_4505 protein of unknown function DUF1612; hypothetical protein 88394 6198044 Bind_3777 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831067.1 87321 D 395963 CDS YP_001831068.1 182676921 6198043 complement(88840..89535) 1 NC_010580.1 KEGG: gbe:GbCGDNIH1_1414 hypothetical secreted protein; hypothetical protein 89535 6198043 Bind_3778 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831068.1 88840 R 395963 CDS YP_001831069.1 182676922 6198042 complement(89803..90072) 1 NC_010580.1 KEGG: rle:RL3601 hypothetical protein; hypothetical protein 90072 6198042 Bind_3779 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831069.1 89803 R 395963 CDS YP_001831070.1 182676923 6198041 complement(90078..91010) 1 NC_010580.1 PFAM: fatty acid hydroxylase; KEGG: rle:RL3600 putative transmembrane fatty acid synthesis protein; fatty acid hydroxylase 91010 6198041 Bind_3780 Beijerinckia indica subsp. indica ATCC 9039 fatty acid hydroxylase YP_001831070.1 90078 R 395963 CDS YP_001831071.1 182676924 6198040 91189..91905 1 NC_010580.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_3219 two-component response transcriptional regulator (OmpR family); two component transcriptional regulator 91905 6198040 Bind_3781 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001831071.1 91189 D 395963 CDS YP_001831072.1 182676925 6198039 91893..93278 1 NC_010580.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bbt:BBta_3220 putative two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 93278 6198039 Bind_3782 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001831072.1 91893 D 395963 CDS YP_001831073.1 182676926 6198038 93737..93961 1 NC_010580.1 hypothetical protein 93961 6198038 Bind_3783 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831073.1 93737 D 395963 CDS YP_001831074.1 182676927 6198037 complement(94775..95515) 1 NC_010580.1 KEGG: rpc:RPC_3230 hypothetical protein; hypothetical protein 95515 6198037 Bind_3784 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831074.1 94775 R 395963 CDS YP_001831075.1 182676928 6198036 complement(95800..96129) 1 NC_010580.1 KEGG: gbe:GbCGDNIH1_1860 hypothetical secreted protein; hypothetical protein 96129 6198036 Bind_3785 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831075.1 95800 R 395963 CDS YP_001831076.1 182676929 6198033 98911..99576 1 NC_010580.1 PFAM: chromosome segregation and condensation protein ScpB; KEGG: nha:Nham_4583 putative transcriptional regulator; chromosome segregation and condensation protein ScpB 99576 6198033 Bind_3788 Beijerinckia indica subsp. indica ATCC 9039 chromosome segregation and condensation protein ScpB YP_001831076.1 98911 D 395963 CDS YP_001831077.1 182676930 6198032 99690..100520 1 NC_010580.1 hypothetical protein 100520 6198032 Bind_3789 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831077.1 99690 D 395963 CDS YP_001831078.1 182676931 6198031 100633..100851 1 NC_010580.1 hypothetical protein 100851 6198031 Bind_3790 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831078.1 100633 D 395963 CDS YP_001831079.1 182676932 6198029 complement(102390..102587) 1 NC_010580.1 hypothetical protein 102587 6198029 Bind_3792 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831079.1 102390 R 395963 CDS YP_001831080.1 182676933 6198028 102746..104059 1 NC_010580.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL4218 putative mannitol-binding component of ABC transporter; extracellular solute-binding protein 104059 6198028 Bind_3793 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001831080.1 102746 D 395963 CDS YP_001831081.1 182676934 6198027 104157..105062 1 NC_010580.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4217 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport systems inner membrane component 105062 6198027 Bind_3794 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport systems inner membrane component YP_001831081.1 104157 D 395963 CDS YP_001831082.1 182676935 6198026 105065..105895 1 NC_010580.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4216 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport systems inner membrane component 105895 6198026 Bind_3795 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport systems inner membrane component YP_001831082.1 105065 D 395963 CDS YP_001831083.1 182676936 6198025 105906..106904 1 NC_010580.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_3278 ATP-binding transport protein SmoK (POLK); ABC transporter related 106904 6198025 Bind_3796 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter related YP_001831083.1 105906 D 395963 CDS YP_001831084.1 182676937 6198024 106999..108978 1 NC_010580.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH); mannitol dehydrogenase domain-containing protein 108978 6198024 Bind_3797 Beijerinckia indica subsp. indica ATCC 9039 mannitol dehydrogenase domain-containing protein YP_001831084.1 106999 D 395963 CDS YP_001831085.1 182676938 6198021 109838..110467 1 NC_010580.1 KEGG: gox:GOX2097 sorbitol dehydrogenase small subunit; sorbitol dehydrogenase small subunit 110467 6198021 Bind_3800 Beijerinckia indica subsp. indica ATCC 9039 sorbitol dehydrogenase small subunit YP_001831085.1 109838 D 395963 CDS YP_001831086.1 182676939 6198019 110490..112127 1 NC_010580.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: zmo:ZMO1285 solbitol dehydrogenase large subunit; glucose-methanol-choline oxidoreductase 112127 6198019 Bind_3801 Beijerinckia indica subsp. indica ATCC 9039 glucose-methanol-choline oxidoreductase YP_001831086.1 110490 D 395963 CDS YP_001831087.1 182676940 6198018 112120..113487 1 NC_010580.1 PFAM: cytochrome c class I; KEGG: gox:GOX2094 sorbitol dehydrogenase cytochrome c subunit; gluconate 2-dehydrogenase (acceptor) 113487 6198018 Bind_3802 Beijerinckia indica subsp. indica ATCC 9039 gluconate 2-dehydrogenase (acceptor) YP_001831087.1 112120 D 395963 CDS YP_001831088.1 182676941 6198016 complement(113582..114361) 1 NC_010580.1 KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; putative insertion sequence transposase-like protein 114361 6198016 Bind_3803 Beijerinckia indica subsp. indica ATCC 9039 putative insertion sequence transposase-like protein YP_001831088.1 113582 R 395963 CDS YP_001831089.1 182676942 6198015 complement(114694..114870) 1 NC_010580.1 hypothetical protein 114870 6198015 Bind_3804 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831089.1 114694 R 395963 CDS YP_001831090.1 182676943 6198014 complement(114861..116858) 1 NC_010580.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 116858 6198014 Bind_3805 Beijerinckia indica subsp. indica ATCC 9039 transketolase YP_001831090.1 114861 R 395963 CDS YP_001831091.1 182676944 6198013 complement(116930..117910) 1 NC_010580.1 KEGG: atc:AGR_L_812 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 117910 6198013 Bind_3806 Beijerinckia indica subsp. indica ATCC 9039 transaldolase B YP_001831091.1 116930 R 395963 CDS YP_001831092.1 182676945 6198012 complement(118025..119470) 1 NC_010580.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bja:bll5785 xylulokinase; xylulokinase 119470 6198012 Bind_3807 Beijerinckia indica subsp. indica ATCC 9039 xylulokinase YP_001831092.1 118025 R 395963 CDS YP_001831093.1 182676946 6198011 complement(119454..120419) 1 NC_010580.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr4907 transcriptional regulator (AraC/XylS family); AraC family transcriptional regulator 120419 6198011 Bind_3808 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001831093.1 119454 R 395963 CDS YP_001831094.1 182676947 6198010 complement(120412..120693) 1 NC_010580.1 hypothetical protein 120693 6198010 Bind_3809 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831094.1 120412 R 395963 CDS YP_001831095.1 182676948 6198009 complement(120695..121741) 1 NC_010580.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr4915 xylitol (sorbitol) dehydrogenase; alcohol dehydrogenase 121741 6198009 Bind_3810 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001831095.1 120695 R 395963 CDS YP_001831096.1 182676949 6198008 complement(121900..122901) 1 NC_010580.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_1506 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 122901 6198008 Bind_3811 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001831096.1 121900 R 395963 CDS YP_001831097.1 182676950 6198007 123072..123353 1 NC_010580.1 hypothetical protein 123353 6198007 Bind_3812 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831097.1 123072 D 395963 CDS YP_001831098.1 182676951 6198005 124252..125901 1 NC_010580.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: smd:Smed_5451 transposase IS204/IS1001/IS1096/IS1165 family protein; transposase IS204/IS1001/IS1096/IS1165 family protein 125901 6198005 Bind_3814 Beijerinckia indica subsp. indica ATCC 9039 transposase IS204/IS1001/IS1096/IS1165 family protein YP_001831098.1 124252 D 395963 CDS YP_001831099.1 182676952 6198004 complement(126419..126703) 1 NC_010580.1 hypothetical protein 126703 6198004 Bind_3815 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831099.1 126419 R 395963 CDS YP_001831100.1 182676953 6198003 126958..127434 1 NC_010580.1 PFAM: heat shock protein Hsp20; KEGG: mlo:mll9627 small heat shock protein; heat shock protein Hsp20 127434 6198003 Bind_3816 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein Hsp20 YP_001831100.1 126958 D 395963 CDS YP_001831101.1 182676954 6198002 127500..127910 1 NC_010580.1 KEGG: nha:Nham_4549 hypothetical protein; hypothetical protein 127910 6198002 Bind_3817 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831101.1 127500 D 395963 CDS YP_001831102.1 182676955 6197996 130105..131553 1 NC_010580.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: nar:Saro_0180 hemerythrin HHE cation binding region protein; hemerythrin HHE cation binding domain-containing protein 131553 6197996 Bind_3822 Beijerinckia indica subsp. indica ATCC 9039 hemerythrin HHE cation binding domain-containing protein YP_001831102.1 130105 D 395963 CDS YP_001831103.1 182676956 6197995 complement(131736..132608) 1 NC_010580.1 PFAM: transglutaminase domain protein; KEGG: rle:RL1406 putative transglutaminase family protein; transglutaminase domain-containing protein 132608 6197995 Bind_3823 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase domain-containing protein YP_001831103.1 131736 R 395963 CDS YP_001831104.1 182676957 6197993 133117..133731 1 NC_010580.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_0062 isochorismatase hydrolase; isochorismatase hydrolase 133731 6197993 Bind_3825 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001831104.1 133117 D 395963 CDS YP_001831105.1 182676958 6197992 complement(133865..134689) 1 NC_010580.1 KEGG: bja:bll5207 hypothetical protein; hypothetical protein 134689 6197992 Bind_3826 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831105.1 133865 R 395963 CDS YP_001831106.1 182676959 6197991 135362..135811 1 NC_010580.1 PFAM: protein of unknown function DUF892; KEGG: rpe:RPE_1822 protein of unknown function DUF892; hypothetical protein 135811 6197991 Bind_3827 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831106.1 135362 D 395963 CDS YP_001831107.1 182676960 6197990 complement(join(135743..136195,136195..136524)) 1 NC_010580.1 KEGG: gox:GOX2729 transposase; transposase 136524 6197990 Bind_3828 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001831107.1 135743 R 395963 CDS YP_001831108.1 182676961 6197989 complement(136826..137332) 1 NC_010580.1 PFAM: protein of unknown function DUF892; KEGG: smd:Smed_4046 protein of unknown function DUF892; hypothetical protein 137332 6197989 Bind_3829 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831108.1 136826 R 395963 CDS YP_001831109.1 182676962 6197988 join(137667..138011,138011..138610) 1 NC_010580.1 KEGG: acr:Acry_3597 transposase and inactivated derivatives-like protein; transposase 138610 6197988 Bind_3830 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001831109.1 137667 D 395963 CDS YP_001831110.1 182676963 6197985 139994..140524 1 NC_010580.1 KEGG: bra:BRADO3437 hypothetical protein; hypothetical protein 140524 6197985 Bind_3833 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831110.1 139994 D 395963 CDS YP_001831111.1 182676964 6197984 140808..141998 1 NC_010580.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 141998 6197984 Bind_3834 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase subunit D YP_001831111.1 140808 D 395963 CDS YP_001831112.1 182676965 6197983 complement(142166..145669) 1 NC_010580.1 KEGG: sme:SMb20515 putative chemotaxis methyltransferase protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor 145669 6197983 Bind_3835 Beijerinckia indica subsp. indica ATCC 9039 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor YP_001831112.1 142166 R 395963 CDS YP_001831113.1 182676966 6197982 145882..146865 1 NC_010580.1 PFAM: CheB methylesterase; KEGG: smd:Smed_5775 CheB methylesterase; CheB methylesterase 146865 6197982 Bind_3836 Beijerinckia indica subsp. indica ATCC 9039 CheB methylesterase YP_001831113.1 145882 D 395963 CDS YP_001831114.1 182676967 6197981 147543..147782 1 NC_010580.1 KEGG: rpe:RPE_1591 hypothetical protein; hypothetical protein 147782 6197981 Bind_3837 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831114.1 147543 D 395963 CDS YP_001831115.1 182676968 6197976 150469..150930 1 NC_010580.1 PFAM: protein of unknown function DUF1348; KEGG: rle:RL1427 hypothetical protein; hypothetical protein 150930 6197976 Bind_3842 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831115.1 150469 D 395963 CDS YP_001831116.1 182676969 6197975 complement(151002..151769) 1 NC_010580.1 KEGG: hch:HCH_04879 hypothetical protein; hypothetical protein 151769 6197975 Bind_3843 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831116.1 151002 R 395963 CDS YP_001831117.1 182676970 6197974 152123..152776 1 NC_010580.1 PFAM: helix-turn-helix domain protein; KEGG: smd:Smed_1854 putative phage repressor; XRE family transcriptional regulator 152776 6197974 Bind_3844 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001831117.1 152123 D 395963 CDS YP_001831118.1 182676971 6197973 complement(153004..153585) 1 NC_010580.1 PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 153585 6197973 Bind_3845 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831118.1 153004 R 395963 CDS YP_001831119.1 182676972 6197972 complement(154232..154642) 1 NC_010580.1 hypothetical protein 154642 6197972 Bind_3846 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831119.1 154232 R 395963 CDS YP_001831120.1 182676973 6197971 complement(154690..155973) 1 NC_010580.1 PFAM: replication protein C; KEGG: acr:Acry_3578 replication protein C; replication protein C 155973 6197971 Bind_3847 Beijerinckia indica subsp. indica ATCC 9039 replication protein C YP_001831120.1 154690 R 395963 CDS YP_001831121.1 182676974 6197970 complement(156275..156835) 1 NC_010580.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_0065 nuclease (SNase domain protein); nuclease 156835 6197970 Bind_3848 Beijerinckia indica subsp. indica ATCC 9039 nuclease YP_001831121.1 156275 R 395963 CDS YP_001831122.1 182676975 6197969 157417..157806 1 NC_010580.1 hypothetical protein 157806 6197969 Bind_3849 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831122.1 157417 D 395963 CDS YP_001831123.1 182676976 6197968 157937..159001 1 NC_010580.1 KEGG: gox:GOX2606 hypothetical protein; hypothetical protein 159001 6197968 Bind_3850 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831123.1 157937 D 395963 CDS YP_001831124.1 182676977 6197967 159003..159530 1 NC_010580.1 hypothetical protein 159530 6197967 Bind_3851 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831124.1 159003 D 395963 CDS YP_001831125.1 182676978 6197966 complement(159587..159898) 1 NC_010580.1 KEGG: gox:GOX2608 hypothetical protein; hypothetical protein 159898 6197966 Bind_3852 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831125.1 159587 R 395963 CDS YP_001831126.1 182676979 6197965 complement(159946..160407) 1 NC_010580.1 hypothetical protein 160407 6197965 Bind_3853 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831126.1 159946 R 395963 CDS YP_001831127.1 182676980 6197964 complement(160410..162740) 1 NC_010580.1 KEGG: gox:GOX2610 hypothetical membrane protein; hypothetical protein 162740 6197964 Bind_3854 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831127.1 160410 R 395963 CDS YP_001831128.1 182676981 6197963 complement(162804..164261) 1 NC_010580.1 KEGG: gox:GOX2611 hypothetical protein; hypothetical protein 164261 6197963 Bind_3855 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831128.1 162804 R 395963 CDS YP_001831129.1 182676982 6197962 complement(164279..165448) 1 NC_010580.1 KEGG: gox:GOX2612 TraW; hypothetical protein 165448 6197962 Bind_3856 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831129.1 164279 R 395963 CDS YP_001831130.1 182676983 6197961 complement(165457..166002) 1 NC_010580.1 KEGG: gox:GOX2613 hypothetical protein; hypothetical protein 166002 6197961 Bind_3857 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831130.1 165457 R 395963 CDS YP_001831131.1 182676984 6197960 complement(166002..166460) 1 NC_010580.1 hypothetical protein 166460 6197960 Bind_3858 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831131.1 166002 R 395963 CDS YP_001831132.1 182676985 6197959 complement(166527..166970) 1 NC_010580.1 hypothetical protein 166970 6197959 Bind_3859 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831132.1 166527 R 395963 CDS YP_001831133.1 182676986 6197958 167133..167588 1 NC_010580.1 PFAM: helix-turn-helix domain protein; KEGG: rpa:RPA4787 anaerobic benzoate catabolism transcriptional regulator; XRE family transcriptional regulator 167588 6197958 Bind_3860 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001831133.1 167133 D 395963 CDS YP_001831134.1 182676987 6197957 167697..168671 1 NC_010580.1 hypothetical protein 168671 6197957 Bind_3861 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831134.1 167697 D 395963 CDS YP_001831135.1 182676988 6197956 168721..169350 1 NC_010580.1 KEGG: lpc:LPC_2894 IcmL (DotI); hypothetical protein 169350 6197956 Bind_3862 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831135.1 168721 D 395963 CDS YP_001831136.1 182676989 6197955 169359..170321 1 NC_010580.1 KEGG: gox:GOX2617 DotH; DotH 170321 6197955 Bind_3863 Beijerinckia indica subsp. indica ATCC 9039 DotH YP_001831136.1 169359 D 395963 CDS YP_001831137.1 182676990 6197954 170323..171624 1 NC_010580.1 KEGG: gox:GOX2618 DotG; hypothetical protein 171624 6197954 Bind_3864 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831137.1 170323 D 395963 CDS YP_001831138.1 182676991 6197953 171680..173110 1 NC_010580.1 KEGG: gox:GOX2619 hypothetical protein; hypothetical protein 173110 6197953 Bind_3865 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831138.1 171680 D 395963 CDS YP_001831139.1 182676992 6197952 173120..173656 1 NC_010580.1 hypothetical protein 173656 6197952 Bind_3866 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831139.1 173120 D 395963 CDS YP_001831140.1 182676993 6197951 173677..173838 1 NC_010580.1 hypothetical protein 173838 6197951 Bind_3867 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831140.1 173677 D 395963 CDS YP_001831141.1 182676994 6197950 174056..174514 1 NC_010580.1 KEGG: mbb:BCG_0318c PE-PGRS family protein; hypothetical protein 174514 6197950 Bind_3868 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831141.1 174056 D 395963 CDS YP_001831142.1 182676995 6197949 174532..175179 1 NC_010580.1 KEGG: gox:GOX2621 hypothetical protein; hypothetical protein 175179 6197949 Bind_3869 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831142.1 174532 D 395963 CDS YP_001831143.1 182676996 6197948 175191..178247 1 NC_010580.1 KEGG: gox:GOX2622 DotO; DotO 178247 6197948 Bind_3870 Beijerinckia indica subsp. indica ATCC 9039 DotO YP_001831143.1 175191 D 395963 CDS YP_001831144.1 182676997 6197947 178511..178993 1 NC_010580.1 KEGG: eci:UTI89_P001 hypothetical protein; hypothetical protein 178993 6197947 Bind_3871 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831144.1 178511 D 395963 CDS YP_001831145.1 182676998 6197946 179025..179573 1 NC_010580.1 hypothetical protein 179573 6197946 Bind_3872 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831145.1 179025 D 395963 CDS YP_001831146.1 182676999 6197945 complement(179592..179936) 1 NC_010580.1 PFAM: histone family protein DNA-binding protein; KEGG: pla:Plav_0506 histone family protein DNA-binding protein; histone family protein DNA-binding protein 179936 6197945 Bind_3873 Beijerinckia indica subsp. indica ATCC 9039 histone family protein DNA-binding protein YP_001831146.1 179592 R 395963 CDS YP_001831147.1 182677000 6197944 180120..180524 1 NC_010580.1 hypothetical protein 180524 6197944 Bind_3874 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831147.1 180120 D 395963 CDS YP_001831148.1 182677001 6197943 complement(180485..181450) 1 NC_010580.1 KEGG: psb:Psyr_1149 hypothetical protein; hypothetical protein 181450 6197943 Bind_3875 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831148.1 180485 R 395963 CDS YP_001831149.1 182677003 6200612 8..271 1 NC_010581.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 271 rpsT 6200612 rpsT Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S20 YP_001831149.1 8 D 395963 CDS YP_001831150.1 182677004 6201461 413..748 1 NC_010581.1 hypothetical protein 748 6201461 Bind_0002 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831150.1 413 D 395963 CDS YP_001831151.1 182677005 6201424 1509..3041 1 NC_010581.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 3041 dnaA 6201424 dnaA Beijerinckia indica subsp. indica ATCC 9039 chromosomal replication initiation protein YP_001831151.1 1509 D 395963 CDS YP_001831152.1 182677006 6201463 3144..3671 1 NC_010581.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3671 ruvC 6201463 ruvC Beijerinckia indica subsp. indica ATCC 9039 Holliday junction resolvase YP_001831152.1 3144 D 395963 CDS YP_001831153.1 182677007 6201467 3668..4285 1 NC_010581.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; KEGG: rpa:RPA1100 Holliday junction DNA helicase motor protein; Holliday junction DNA helicase RuvA 4285 6201467 Bind_0005 Beijerinckia indica subsp. indica ATCC 9039 Holliday junction DNA helicase RuvA YP_001831153.1 3668 D 395963 CDS YP_001831154.1 182677008 6201650 complement(4319..5377) 1 NC_010581.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 5377 6201650 Bind_0006 Beijerinckia indica subsp. indica ATCC 9039 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001831154.1 4319 R 395963 CDS YP_001831155.1 182677009 6201674 5533..6546 1 NC_010581.1 KEGG: nwi:Nwi_0471 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 6546 6201674 Bind_0007 Beijerinckia indica subsp. indica ATCC 9039 porphobilinogen deaminase YP_001831155.1 5533 D 395963 CDS YP_001831156.1 182677010 6201675 6552..7292 1 NC_010581.1 KEGG: xau:Xaut_1159 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 7292 6201675 Bind_0008 Beijerinckia indica subsp. indica ATCC 9039 uroporphyrinogen III synthase HEM4 YP_001831156.1 6552 D 395963 CDS YP_001831157.1 182677011 6201805 7307..8101 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6190 ABC transporter ATP-binding protein; ABC transporter-like protein 8101 6201805 Bind_0009 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831157.1 7307 D 395963 CDS YP_001831158.1 182677012 6201422 8098..8931 1 NC_010581.1 PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein; ABC-2 type transporter 8931 6201422 Bind_0010 Beijerinckia indica subsp. indica ATCC 9039 ABC-2 type transporter YP_001831158.1 8098 D 395963 CDS YP_001831159.1 182677013 6201432 complement(8947..9345) 1 NC_010581.1 PFAM: cytochrome c class I; KEGG: nwi:Nwi_2582 cytochrome c, class I; cytochrome c class I 9345 6201432 Bind_0011 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c class I YP_001831159.1 8947 R 395963 CDS YP_001831160.1 182677014 6201496 complement(9744..10217) 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bbk:BARBAKC583_0805 thioredoxin family protein; alkyl hydroperoxide reductase 10217 6201496 Bind_0012 Beijerinckia indica subsp. indica ATCC 9039 alkyl hydroperoxide reductase YP_001831160.1 9744 R 395963 CDS YP_001831161.1 182677015 6200712 10660..14382 1 NC_010581.1 KEGG: mex:Mext_2985 hypothetical protein; hypothetical protein 14382 6200712 Bind_0013 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831161.1 10660 D 395963 CDS YP_001831162.1 182677016 6198616 14538..16481 1 NC_010581.1 PFAM: phosphoesterase; KEGG: aba:Acid345_2127 phosphoesterase; phosphoesterase 16481 6198616 Bind_0014 Beijerinckia indica subsp. indica ATCC 9039 phosphoesterase YP_001831162.1 14538 D 395963 CDS YP_001831163.1 182677017 6201707 16797..18278 1 NC_010581.1 KEGG: spe:Spro_0124 hypothetical protein; hypothetical protein 18278 6201707 Bind_0015 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831163.1 16797 D 395963 CDS YP_001831164.1 182677018 6199409 complement(18360..19787) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_C7472 aldehyde dehydrogenase; aldehyde dehydrogenase 19787 6199409 Bind_0016 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001831164.1 18360 R 395963 CDS YP_001831165.1 182677019 6201503 19888..20514 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C7473 transcriptional regulator, TetR family; TetR family transcriptional regulator 20514 6201503 Bind_0017 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831165.1 19888 D 395963 CDS YP_001831166.1 182677020 6201598 complement(20652..21485) 1 NC_010581.1 hypothetical protein 21485 6201598 Bind_0018 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831166.1 20652 R 395963 CDS YP_001831167.1 182677021 6201421 complement(21485..22681) 1 NC_010581.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: gme:Gmet_3140 DNA adenine methylase; D12 class N6 adenine-specific DNA methyltransferase 22681 6201421 Bind_0019 Beijerinckia indica subsp. indica ATCC 9039 D12 class N6 adenine-specific DNA methyltransferase YP_001831167.1 21485 R 395963 CDS YP_001831168.1 182677022 6201445 complement(22725..23990) 1 NC_010581.1 KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 23990 6201445 Bind_0020 Beijerinckia indica subsp. indica ATCC 9039 tyrosyl-tRNA synthetase YP_001831168.1 22725 R 395963 CDS YP_001831169.1 182677023 6201568 24079..25302 1 NC_010581.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 25302 anmK 6201568 anmK Beijerinckia indica subsp. indica ATCC 9039 anhydro-N-acetylmuramic acid kinase YP_001831169.1 24079 D 395963 CDS YP_001831170.1 182677024 6201430 25411..25632 1 NC_010581.1 hypothetical protein 25632 6201430 Bind_0022 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831170.1 25411 D 395963 CDS YP_001831171.1 182677025 6198958 complement(25723..26049) 1 NC_010581.1 hypothetical protein 26049 6198958 Bind_0023 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831171.1 25723 R 395963 CDS YP_001831172.1 182677026 6198455 26639..27619 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mca:MCA1165 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 27619 6198455 Bind_0024 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001831172.1 26639 D 395963 CDS YP_001831173.1 182677027 6199263 complement(27769..28857) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein 28857 6199263 Bind_0025 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831173.1 27769 R 395963 CDS YP_001831174.1 182677028 6200711 29298..29627 1 NC_010581.1 KEGG: rle:RL0365 hypothetical protein; hypothetical protein 29627 6200711 Bind_0026 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831174.1 29298 D 395963 CDS YP_001831175.1 182677029 6200847 29947..30522 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: scl:sce2153 transcriptional regulator, TetR family; TetR family transcriptional regulator 30522 6200847 Bind_0027 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831175.1 29947 D 395963 CDS YP_001831176.1 182677030 6200659 30519..31511 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: pla:Plav_1506 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase 31511 6200659 Bind_0028 Beijerinckia indica subsp. indica ATCC 9039 3-beta hydroxysteroid dehydrogenase/isomerase YP_001831176.1 30519 D 395963 CDS YP_001831177.1 182677031 6200648 31894..32730 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4288 short chain dehydrogenase; short chain dehydrogenase 32730 6200648 Bind_0029 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001831177.1 31894 D 395963 CDS YP_001831178.1 182677032 6201177 32743..33768 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS03889 probable transcription regulator protein; AraC family transcriptional regulator 33768 6201177 Bind_0030 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001831178.1 32743 D 395963 CDS YP_001831179.1 182677033 6199723 33829..34503 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: nar:Saro_1849 NAD-dependent epimerase/dehydratase; hypothetical protein 34503 6199723 Bind_0031 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831179.1 33829 D 395963 CDS YP_001831180.1 182677034 6199563 complement(34593..35495) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kra:Krad_2789 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 35495 6199563 Bind_0032 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001831180.1 34593 R 395963 CDS YP_001831181.1 182677035 6201414 35593..36258 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: kra:Krad_2790 transcriptional regulator, TetR family; TetR family transcriptional regulator 36258 6201414 Bind_0033 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831181.1 35593 D 395963 CDS YP_001831182.1 182677036 6201613 complement(36650..37558) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: gbe:GbCGDNIH1_1155 carboxylesterase; alpha/beta hydrolase fold protein 37558 6201613 Bind_0034 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001831182.1 36650 R 395963 CDS YP_001831183.1 182677037 6198872 complement(37555..38016) 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1154 hypothetical secreted protein; hypothetical protein 38016 6198872 Bind_0035 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831183.1 37555 R 395963 CDS YP_001831184.1 182677038 6201579 complement(38013..38675) 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1153 hypothetical cytosolic protein; hypothetical protein 38675 6201579 Bind_0036 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831184.1 38013 R 395963 CDS YP_001831185.1 182677039 6201559 39217..40068 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msm:MSMEG_1114 short chain dehydrogenase; short chain dehydrogenase 40068 6201559 Bind_0037 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001831185.1 39217 D 395963 CDS YP_001831186.1 182677040 6201540 40125..40589 1 NC_010581.1 KEGG: rso:RS03893 putative signal peptide protein; putative signal peptide protein 40589 6201540 Bind_0038 Beijerinckia indica subsp. indica ATCC 9039 putative signal peptide protein YP_001831186.1 40125 D 395963 CDS YP_001831187.1 182677041 6201529 40669..40974 1 NC_010581.1 KEGG: mes:Meso_0915 methyltransferase type 12; hypothetical protein 40974 6201529 Bind_0039 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831187.1 40669 D 395963 CDS YP_001831188.1 182677042 6200290 41211..42062 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4288 short chain dehydrogenase; short chain dehydrogenase 42062 6200290 Bind_0040 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001831188.1 41211 D 395963 CDS YP_001831189.1 182677043 6198397 42077..43486 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: cak:Caul_4341 aldehyde dehydrogenase_; aldehyde dehydrogenase 43486 6198397 Bind_0041 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001831189.1 42077 D 395963 CDS YP_001831190.1 182677044 6200919 43489..44523 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS03889 probable transcription regulator protein; AraC family transcriptional regulator 44523 6200919 Bind_0042 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001831190.1 43489 D 395963 CDS YP_001831191.1 182677045 6201406 44583..45068 1 NC_010581.1 KEGG: pla:Plav_0855 male sterility domain; hypothetical protein 45068 6201406 Bind_0043 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831191.1 44583 D 395963 CDS YP_001831192.1 182677046 6201563 45089..45247 1 NC_010581.1 hypothetical protein 45247 6201563 Bind_0044 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831192.1 45089 D 395963 CDS YP_001831193.1 182677047 6201712 complement(45890..46147) 1 NC_010581.1 KEGG: atc:AGR_C_1076 hypothetical protein; hypothetical protein 46147 6201712 Bind_0045 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831193.1 45890 R 395963 CDS YP_001831194.1 182677048 6201175 complement(46376..46528) 1 NC_010581.1 hypothetical protein 46528 6201175 Bind_0046 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831194.1 46376 R 395963 CDS YP_001831195.1 182677049 6201587 complement(46724..48316) 1 NC_010581.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 48316 6201587 Bind_0047 Beijerinckia indica subsp. indica ATCC 9039 isocitrate lyase YP_001831195.1 46724 R 395963 CDS YP_001831196.1 182677050 6201201 48563..50029 1 NC_010581.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpe:RPE_1394 transcriptional regulator, XRE family; XRE family transcriptional regulator 50029 6201201 Bind_0048 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001831196.1 48563 D 395963 CDS YP_001831197.1 182677051 6200856 50242..50538 1 NC_010581.1 KEGG: sco:SCO3894 transmembrane protein; hypothetical protein 50538 6200856 Bind_0049 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831197.1 50242 D 395963 CDS YP_001831198.1 182677052 6199503 50754..52025 1 NC_010581.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: atc:AGR_L_2454 diaminopimelate decarboxylase; diaminopimelate decarboxylase 52025 6199503 Bind_0050 Beijerinckia indica subsp. indica ATCC 9039 diaminopimelate decarboxylase YP_001831198.1 50754 D 395963 CDS YP_001831199.1 182677053 6198581 52060..54639 1 NC_010581.1 KEGG: mex:Mext_1537 hypothetical protein; hypothetical protein 54639 6198581 Bind_0051 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831199.1 52060 D 395963 CDS YP_001831200.1 182677054 6200945 complement(54725..55258) 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 55258 6200945 Bind_0052 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001831200.1 54725 R 395963 CDS YP_001831201.1 182677055 6201433 complement(55508..57445) 1 NC_010581.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 57445 6201433 Bind_0053 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA synthetase YP_001831201.1 55508 R 395963 CDS YP_001831202.1 182677056 6200807 complement(57445..57657) 1 NC_010581.1 hypothetical protein 57657 6200807 Bind_0054 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831202.1 57445 R 395963 CDS YP_001831203.1 182677057 6200817 complement(58350..59234) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1149 transcriptional regulator; LysR family transcriptional regulator 59234 6200817 Bind_0055 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831203.1 58350 R 395963 CDS YP_001831204.1 182677058 6198837 complement(59373..60353) 1 NC_010581.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_1092 thioredoxin reductase; thioredoxin reductase 60353 6198837 Bind_0056 Beijerinckia indica subsp. indica ATCC 9039 thioredoxin reductase YP_001831204.1 59373 R 395963 CDS YP_001831205.1 182677059 6198574 complement(60563..61072) 1 NC_010581.1 PFAM: protein of unknown function DUF992; KEGG: azc:AZC_3134 hypothetical protein; hypothetical protein 61072 6198574 Bind_0057 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831205.1 60563 R 395963 CDS YP_001831206.1 182677060 6198962 61410..61811 1 NC_010581.1 PFAM: GtrA family protein; KEGG: azc:AZC_1144 hypothetical protein; GtrA family protein 61811 6198962 Bind_0058 Beijerinckia indica subsp. indica ATCC 9039 GtrA family protein YP_001831206.1 61410 D 395963 CDS YP_001831207.1 182677061 6199383 complement(61823..62071) 1 NC_010581.1 KEGG: xau:Xaut_2953 hypothetical protein; hypothetical protein 62071 6199383 Bind_0059 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831207.1 61823 R 395963 CDS YP_001831208.1 182677062 6200130 complement(62473..63378) 1 NC_010581.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 63378 6200130 Bind_0060 Beijerinckia indica subsp. indica ATCC 9039 coproporphyrinogen III oxidase YP_001831208.1 62473 R 395963 CDS YP_001831209.1 182677063 6198462 complement(63730..64293) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bja:blr7984 transcriptional regulatory protein; TetR family transcriptional regulator 64293 6198462 Bind_0061 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831209.1 63730 R 395963 CDS YP_001831210.1 182677064 6199043 64407..65102 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll7983 glutathione transferase; glutathione S-transferase domain-containing protein 65102 6199043 Bind_0062 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001831210.1 64407 D 395963 CDS YP_001831211.1 182677065 6199142 65496..67340 1 NC_010581.1 PFAM: thiamine biosynthesis protein ThiC; KEGG: acr:Acry_0965 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 67340 6199142 Bind_0063 Beijerinckia indica subsp. indica ATCC 9039 thiamine biosynthesis protein ThiC YP_001831211.1 65496 D 395963 CDS YP_001831212.1 182677066 6200771 67663..67932 1 NC_010581.1 hypothetical protein 67932 6200771 Bind_0064 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831212.1 67663 D 395963 CDS YP_001831213.1 182677067 6200365 68109..69485 1 NC_010581.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rme:Rmet_5902 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 69485 6200365 Bind_0065 Beijerinckia indica subsp. indica ATCC 9039 ethanolamine ammonia lyase large subunit YP_001831213.1 68109 D 395963 CDS YP_001831214.1 182677068 6201029 69482..70237 1 NC_010581.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: sma:SAV4545 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase 70237 6201029 Bind_0066 Beijerinckia indica subsp. indica ATCC 9039 ethanolamine ammonia-lyase YP_001831214.1 69482 D 395963 CDS YP_001831215.1 182677069 6201615 70335..70622 1 NC_010581.1 KEGG: mex:Mext_3988 hypothetical protein; hypothetical protein 70622 6201615 Bind_0067 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831215.1 70335 D 395963 CDS YP_001831216.1 182677070 6201250 complement(70630..71103) 1 NC_010581.1 PFAM: protein of unknown function DUF1052; KEGG: rpa:RPA0570 hypothetical protein; hypothetical protein 71103 6201250 Bind_0068 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831216.1 70630 R 395963 CDS YP_001831217.1 182677071 6201325 complement(71133..71771) 1 NC_010581.1 hypothetical protein 71771 6201325 Bind_0069 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831217.1 71133 R 395963 CDS YP_001831218.1 182677072 6201636 complement(71849..73807) 1 NC_010581.1 KEGG: mmr:Mmar10_2450 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 73807 6201636 Bind_0070 Beijerinckia indica subsp. indica ATCC 9039 sulfate adenylyltransferase, large subunit YP_001831218.1 71849 R 395963 CDS YP_001831219.1 182677073 6201150 complement(73807..74715) 1 NC_010581.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 74715 6201150 Bind_0071 Beijerinckia indica subsp. indica ATCC 9039 sulfate adenylyltransferase subunit 2 YP_001831219.1 73807 R 395963 CDS YP_001831220.1 182677074 6200914 complement(74925..76265) 1 NC_010581.1 KEGG: xau:Xaut_2720 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 76265 6200914 Bind_0072 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001831220.1 74925 R 395963 CDS YP_001831221.1 182677075 6201519 complement(76589..79420) 1 NC_010581.1 TIGRFAM: outer membrane autotransporter barrel domain protein; KEGG: rpd:RPD_1013 outer membrane autotransporter barrel; outer membrane autotransporter 79420 6201519 Bind_0073 Beijerinckia indica subsp. indica ATCC 9039 outer membrane autotransporter YP_001831221.1 76589 R 395963 CDS YP_001831222.1 182677076 6201416 80216..83644 1 NC_010581.1 PFAM: helicase domain protein; KEGG: mex:Mext_4394 helicase domain protein; helicase domain-containing protein 83644 6201416 Bind_0074 Beijerinckia indica subsp. indica ATCC 9039 helicase domain-containing protein YP_001831222.1 80216 D 395963 CDS YP_001831223.1 182677077 6201462 84000..84200 1 NC_010581.1 KEGG: reu:Reut_B4493 hypothetical protein; hypothetical protein 84200 6201462 Bind_0075 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831223.1 84000 D 395963 CDS YP_001831224.1 182677078 6201391 84190..85686 1 NC_010581.1 PFAM: Na+/solute symporter; KEGG: bja:bll5890 monocarboxylic acid permease; Na+/solute symporter 85686 6201391 Bind_0076 Beijerinckia indica subsp. indica ATCC 9039 Na+/solute symporter YP_001831224.1 84190 D 395963 CDS YP_001831225.1 182677079 6201203 86073..86612 1 NC_010581.1 KEGG: xau:Xaut_1175 hypothetical protein; hypothetical protein 86612 6201203 Bind_0077 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831225.1 86073 D 395963 CDS YP_001831226.1 182677080 6200829 complement(86726..86947) 1 NC_010581.1 hypothetical protein 86947 6200829 Bind_0078 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831226.1 86726 R 395963 CDS YP_001831227.1 182677081 6201616 87352..88554 1 NC_010581.1 PFAM: aminotransferase class I and II; KEGG: oan:Oant_1672 aminotransferase class I and II; class I and II aminotransferase 88554 6201616 Bind_0079 Beijerinckia indica subsp. indica ATCC 9039 class I and II aminotransferase YP_001831227.1 87352 D 395963 CDS YP_001831228.1 182677082 6201055 complement(88607..90139) 1 NC_010581.1 PFAM: chemotaxis sensory transducer; KEGG: ccr:CC_0428 methyl-accepting chemotaxis protein McpB; methyl-accepting chemotaxis sensory transducer 90139 6201055 Bind_0080 Beijerinckia indica subsp. indica ATCC 9039 methyl-accepting chemotaxis sensory transducer YP_001831228.1 88607 R 395963 CDS YP_001831229.1 182677083 6200830 complement(90246..91397) 1 NC_010581.1 PFAM: high-affinity nickel-transporter; KEGG: rpb:RPB_4543 high-affinity nickel-transporter; high-affinity nickel-transporter 91397 6200830 Bind_0081 Beijerinckia indica subsp. indica ATCC 9039 high-affinity nickel-transporter YP_001831229.1 90246 R 395963 CDS YP_001831230.1 182677084 6201497 complement(91491..92222) 1 NC_010581.1 PFAM: protein of unknown function DUF1007; KEGG: azc:AZC_0694 hypothetical protein; hypothetical protein 92222 6201497 Bind_0082 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831230.1 91491 R 395963 CDS YP_001831231.1 182677085 6200879 92599..96162 1 NC_010581.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 96162 6200879 Bind_0083 Beijerinckia indica subsp. indica ATCC 9039 indolepyruvate ferredoxin oxidoreductase YP_001831231.1 92599 D 395963 CDS YP_001831232.1 182677086 6201672 complement(96172..96708) 1 NC_010581.1 PFAM: globin; KEGG: rpa:RPA3708 globin-like protein; globin 96708 6201672 Bind_0084 Beijerinckia indica subsp. indica ATCC 9039 globin YP_001831232.1 96172 R 395963 CDS YP_001831233.1 182677087 6201376 97040..97165 1 NC_010581.1 TIGRFAM: ribosomal protein L36; KEGG: nwi:Nwi_0983 ribosomal protein L36; 50S ribosomal protein L36 97165 6201376 Bind_0085 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L36 YP_001831233.1 97040 D 395963 CDS YP_001831234.1 182677088 6201402 97256..98179 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll7547 hypothetical protein; hypothetical protein 98179 6201402 Bind_0086 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831234.1 97256 D 395963 CDS YP_001831235.1 182677089 6201488 98679..100817 1 NC_010581.1 PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: acr:Acry_0387 glycosyltransferase sugar-binding region containing DXD motif; glycosyl transferase family protein 100817 6201488 Bind_0087 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831235.1 98679 D 395963 CDS YP_001831236.1 182677090 6201498 complement(101066..101818) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: pmh:P9215_12991 hypothetical protein; glycosyl transferase family protein 101818 6201498 Bind_0088 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831236.1 101066 R 395963 CDS YP_001831237.1 182677091 6200841 102176..103288 1 NC_010581.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: reh:H16_B2164 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 103288 6200841 Bind_0089 Beijerinckia indica subsp. indica ATCC 9039 NADH:flavin oxidoreductase YP_001831237.1 102176 D 395963 CDS YP_001831238.1 182677092 6201558 103285..104181 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: gdi:GDI3479 putative nucleoside-diphosphate-sugar epimerase dehydratase protein; NAD-dependent epimerase/dehydratase 104181 6201558 Bind_0090 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001831238.1 103285 D 395963 CDS YP_001831239.1 182677093 6201393 complement(104195..104758) 1 NC_010581.1 KEGG: bcs:BCAN_A0104 hypothetical protein; hypothetical protein 104758 6201393 Bind_0091 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831239.1 104195 R 395963 CDS YP_001831240.1 182677094 6201315 complement(104888..105544) 1 NC_010581.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: xau:Xaut_2494 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 105544 6201315 Bind_0092 Beijerinckia indica subsp. indica ATCC 9039 peptide methionine sulfoxide reductase YP_001831240.1 104888 R 395963 CDS YP_001831241.1 182677095 6201548 105955..106665 1 NC_010581.1 PFAM: protein of unknown function DUF1013; KEGG: azc:AZC_1470 hypothetical protein; hypothetical protein 106665 6201548 Bind_0093 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831241.1 105955 D 395963 CDS YP_001831242.1 182677096 6201628 106869..107210 1 NC_010581.1 hypothetical protein 107210 6201628 Bind_0094 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831242.1 106869 D 395963 CDS YP_001831243.1 182677097 6198279 complement(107644..108300) 1 NC_010581.1 PFAM: Intracellular septation protein A; KEGG: smd:Smed_3090 intracellular septation protein A; intracellular septation protein A 108300 6198279 Bind_0095 Beijerinckia indica subsp. indica ATCC 9039 intracellular septation protein A YP_001831243.1 107644 R 395963 CDS YP_001831244.1 182677098 6198489 complement(108409..109101) 1 NC_010581.1 KEGG: mex:Mext_3975 conserved hypothetical protein; putative alpha/beta hydrolase domain; hypothetical protein 109101 6198489 Bind_0096 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831244.1 108409 R 395963 CDS YP_001831245.1 182677099 6201644 109805..110986 1 NC_010581.1 PFAM: aminotransferase class V; KEGG: bja:blr4338 cysteine desulfurase; class V aminotransferase 110986 6201644 Bind_0097 Beijerinckia indica subsp. indica ATCC 9039 class V aminotransferase YP_001831245.1 109805 D 395963 CDS YP_001831246.1 182677100 6201061 111090..112610 1 NC_010581.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: azc:AZC_1044 FeS assembly SufB protein; FeS assembly protein SufB 112610 6201061 Bind_0098 Beijerinckia indica subsp. indica ATCC 9039 FeS assembly protein SufB YP_001831246.1 111090 D 395963 CDS YP_001831247.1 182677101 6201582 112922..113677 1 NC_010581.1 KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 113677 6201582 Bind_0099 Beijerinckia indica subsp. indica ATCC 9039 FeS assembly ATPase SufC YP_001831247.1 112922 D 395963 CDS YP_001831248.1 182677102 6201528 113704..115038 1 NC_010581.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability; FeS assembly protein SufD 115038 6201528 Bind_0100 Beijerinckia indica subsp. indica ATCC 9039 FeS assembly protein SufD YP_001831248.1 113704 D 395963 CDS YP_001831249.1 182677103 6200918 115208..116452 1 NC_010581.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bra:BRADO5444 cysteine desulfurase; SufS subfamily cysteine desulfurase 116452 6200918 Bind_0101 Beijerinckia indica subsp. indica ATCC 9039 SufS subfamily cysteine desulfurase YP_001831249.1 115208 D 395963 CDS YP_001831250.1 182677104 6201286 116470..116862 1 NC_010581.1 PFAM: protein of unknown function DUF59; KEGG: hne:HNE_2613 hypothetical protein; hypothetical protein 116862 6201286 Bind_0102 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831250.1 116470 D 395963 CDS YP_001831251.1 182677105 6201542 117065..117439 1 NC_010581.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_3609 HesB protein; iron-sulfur cluster assembly accessory protein 117439 6201542 Bind_0103 Beijerinckia indica subsp. indica ATCC 9039 iron-sulfur cluster assembly accessory protein YP_001831251.1 117065 D 395963 CDS YP_001831252.1 182677106 6201690 117724..118578 1 NC_010581.1 KEGG: gdi:GDI0015 putative shikimate dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; shikimate 5-dehydrogenase 118578 6201690 Bind_0104 Beijerinckia indica subsp. indica ATCC 9039 shikimate 5-dehydrogenase YP_001831252.1 117724 D 395963 CDS YP_001831253.1 182677107 6200772 complement(118665..120113) 1 NC_010581.1 KEGG: gdi:GDI0016 putative sugar transporter protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 120113 6200772 Bind_0105 Beijerinckia indica subsp. indica ATCC 9039 sugar transporter YP_001831253.1 118665 R 395963 CDS YP_001831254.1 182677108 6201460 complement(120432..121886) 1 NC_010581.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mes:Meso_1773 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 121886 6201460 Bind_0106 Beijerinckia indica subsp. indica ATCC 9039 DEAD/DEAH box helicase YP_001831254.1 120432 R 395963 CDS YP_001831255.1 182677109 6200860 complement(122304..123137) 1 NC_010581.1 PFAM: iron permease FTR1; KEGG: bra:BRADO0319 conserved hypothetical protein; putative high-affinity Fe2+/Pb2+ permease; iron permease FTR1 123137 6200860 Bind_0107 Beijerinckia indica subsp. indica ATCC 9039 iron permease FTR1 YP_001831255.1 122304 R 395963 CDS YP_001831256.1 182677110 6200710 123668..124402 1 NC_010581.1 PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: azc:AZC_3727 outer membrane protein Omp31 precursor; porin 124402 6200710 Bind_0108 Beijerinckia indica subsp. indica ATCC 9039 porin YP_001831256.1 123668 D 395963 CDS YP_001831257.1 182677111 6200721 complement(125255..127021) 1 NC_010581.1 KEGG: gdi:GDI1498 putative chemoreceptor McpA; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 127021 6200721 Bind_0110 Beijerinckia indica subsp. indica ATCC 9039 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_001831257.1 125255 R 395963 CDS YP_001831258.1 182677112 6201716 complement(127512..128558) 1 NC_010581.1 KEGG: bja:blr2721 probable serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase 128558 6201716 Bind_0111 Beijerinckia indica subsp. indica ATCC 9039 2-alkenal reductase YP_001831258.1 127512 R 395963 CDS YP_001831259.1 182677113 6199651 128940..129374 1 NC_010581.1 PFAM: cytochrome c prime; KEGG: rpe:RPE_3086 cytochrome c, class II; cytochrome c prime 129374 6199651 Bind_0112 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c prime YP_001831259.1 128940 D 395963 CDS YP_001831260.1 182677114 6201428 129371..130096 1 NC_010581.1 PFAM: cytochrome B561; KEGG: rpe:RPE_3087 cytochrome b561; cytochrome B561 130096 6201428 Bind_0113 Beijerinckia indica subsp. indica ATCC 9039 cytochrome B561 YP_001831260.1 129371 D 395963 CDS YP_001831261.1 182677115 6201602 complement(130073..131155) 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase; group 1 glycosyl transferase 131155 6201602 Bind_0114 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831261.1 130073 R 395963 CDS YP_001831262.1 182677116 6199904 complement(131157..131969) 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: xau:Xaut_4108 metallophosphoesterase; metallophosphoesterase 131969 6199904 Bind_0115 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001831262.1 131157 R 395963 CDS YP_001831263.1 182677117 6201394 132371..132988 1 NC_010581.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4469 helix-turn-helix domain protein; XRE family transcriptional regulator 132988 6201394 Bind_0116 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001831263.1 132371 D 395963 CDS YP_001831264.1 182677118 6200623 133040..134305 1 NC_010581.1 PFAM: aminotransferase class-III; KEGG: swi:Swit_3034 aminotransferase class-III; class III aminotransferase 134305 6200623 Bind_0117 Beijerinckia indica subsp. indica ATCC 9039 class III aminotransferase YP_001831264.1 133040 D 395963 CDS YP_001831265.1 182677119 6201459 complement(134392..135882) 1 NC_010581.1 KEGG: gdi:GDI0639 hypothetical protein; hypothetical protein 135882 6201459 Bind_0118 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831265.1 134392 R 395963 CDS YP_001831266.1 182677120 6201532 complement(136076..137218) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1720 putative pyruvate dehydrogenase E2 component; branched-chain alpha-keto acid dehydrogenase subunit E2 137218 6201532 Bind_0119 Beijerinckia indica subsp. indica ATCC 9039 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001831266.1 136076 R 395963 CDS YP_001831267.1 182677121 6201614 complement(137215..138240) 1 NC_010581.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gdi:GDI1721 putative pyruvate dehydrogenase E1 component subunit beta; transketolase central region 138240 6201614 Bind_0120 Beijerinckia indica subsp. indica ATCC 9039 transketolase central region YP_001831267.1 137215 R 395963 CDS YP_001831268.1 182677122 6201561 complement(138252..139217) 1 NC_010581.1 PFAM: dehydrogenase E1 component; KEGG: gdi:GDI1722 putative pyruvate dehydrogenase E1 component subunit alpha; pyruvate dehydrogenase 139217 6201561 Bind_0121 Beijerinckia indica subsp. indica ATCC 9039 pyruvate dehydrogenase YP_001831268.1 138252 R 395963 CDS YP_001831269.1 182677123 6198760 139904..143272 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: gbe:GbCGDNIH1_0231 acriflavin resistance plasma membrane protein; acriflavin resistance protein 143272 6198760 Bind_0122 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001831269.1 139904 D 395963 CDS YP_001831270.1 182677124 6198828 143272..144525 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gdi:GDI3850 secretion protein, HlyD-family; RND family efflux transporter MFP subunit 144525 6198828 Bind_0123 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001831270.1 143272 D 395963 CDS YP_001831271.1 182677125 6199617 144522..146099 1 NC_010581.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mca:MCA0176 outer membrane efflux protein; RND efflux system outer membrane lipoprotein 146099 6199617 Bind_0124 Beijerinckia indica subsp. indica ATCC 9039 RND efflux system outer membrane lipoprotein YP_001831271.1 144522 D 395963 CDS YP_001831272.1 182677126 6201476 147095..147952 1 NC_010581.1 KEGG: rle:pRL110441 putative phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 147952 6201476 Bind_0125 Beijerinckia indica subsp. indica ATCC 9039 phosphomethylpyrimidine kinase YP_001831272.1 147095 D 395963 CDS YP_001831273.1 182677127 6200818 complement(147977..148681) 1 NC_010581.1 KEGG: mex:Mext_4766 hypothetical protein; hypothetical protein 148681 6200818 Bind_0126 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831273.1 147977 R 395963 CDS YP_001831274.1 182677128 6201569 complement(148825..149850) 1 NC_010581.1 KEGG: mex:Mext_2959 hypothetical protein; hypothetical protein 149850 6201569 Bind_0127 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831274.1 148825 R 395963 CDS YP_001831275.1 182677129 6201543 150289..152187 1 NC_010581.1 KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 152187 6201543 Bind_0128 Beijerinckia indica subsp. indica ATCC 9039 chaperone protein DnaK YP_001831275.1 150289 D 395963 CDS YP_001831276.1 182677130 6201448 152599..153717 1 NC_010581.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ; chaperone protein DnaJ 153717 6201448 Bind_0129 Beijerinckia indica subsp. indica ATCC 9039 chaperone protein DnaJ YP_001831276.1 152599 D 395963 CDS YP_001831277.1 182677131 6201556 153939..154733 1 NC_010581.1 SMART: ribosomal RNA adenine methylase transferase; KEGG: azc:AZC_0161 phospholipid N-methyltransferase; ribosomal RNA adenine methylase transferase 154733 6201556 Bind_0130 Beijerinckia indica subsp. indica ATCC 9039 ribosomal RNA adenine methylase transferase YP_001831277.1 153939 D 395963 CDS YP_001831278.1 182677132 6200053 154730..155485 1 NC_010581.1 KEGG: mex:Mext_1520 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 155485 6200053 Bind_0131 Beijerinckia indica subsp. indica ATCC 9039 orotidine 5'-phosphate decarboxylase YP_001831278.1 154730 D 395963 CDS YP_001831279.1 182677133 6201446 155522..156337 1 NC_010581.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 156337 6201446 Bind_0132 Beijerinckia indica subsp. indica ATCC 9039 dihydrodipicolinate reductase YP_001831279.1 155522 D 395963 CDS YP_001831280.1 182677134 6199432 156383..157435 1 NC_010581.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 157435 ruvB 6199432 ruvB Beijerinckia indica subsp. indica ATCC 9039 Holliday junction DNA helicase RuvB YP_001831280.1 156383 D 395963 CDS YP_001831281.1 182677135 6201724 complement(157457..159502) 1 NC_010581.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bra:BRADO4669 putative efflux transporter permease; putative fusaric acid resistance pump; fusaric acid resistance protein region 159502 6201724 Bind_0134 Beijerinckia indica subsp. indica ATCC 9039 fusaric acid resistance protein region YP_001831281.1 157457 R 395963 CDS YP_001831282.1 182677136 6200889 complement(159499..159972) 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: bvi:Bcep1808_5466 transcriptional regulator, MarR family; MarR family transcriptional regulator 159972 6200889 Bind_0135 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001831282.1 159499 R 395963 CDS YP_001831283.1 182677137 6200669 160278..161213 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: ter:Tery_4588 glycosyl transferase, family 2; glycosyl transferase family protein 161213 6200669 Bind_0136 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831283.1 160278 D 395963 CDS YP_001831284.1 182677138 6201285 complement(161253..164000) 1 NC_010581.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 164000 6201285 Bind_0137 Beijerinckia indica subsp. indica ATCC 9039 peptidase C14 caspase catalytic subunit p20 YP_001831284.1 161253 R 395963 CDS YP_001831285.1 182677139 6198215 164257..167055 1 NC_010581.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: ajs:Ajs_2889 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 167055 6198215 Bind_0138 Beijerinckia indica subsp. indica ATCC 9039 phosphoenolpyruvate carboxylase YP_001831285.1 164257 D 395963 CDS YP_001831286.1 182677140 6201588 167209..169008 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ppg:PputGB1_4083 amino acid adenylation domain protein; AMP-dependent synthetase and ligase 169008 6201588 Bind_0139 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001831286.1 167209 D 395963 CDS YP_001831287.1 182677141 6199635 complement(169130..169663) 1 NC_010581.1 PFAM: Ferritin Dps family protein; KEGG: gdi:GDI0826 ferritin-like protein; ferritin Dps family protein 169663 6199635 Bind_0140 Beijerinckia indica subsp. indica ATCC 9039 ferritin Dps family protein YP_001831287.1 169130 R 395963 CDS YP_001831288.1 182677142 6200932 complement(170001..171875) 1 NC_010581.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_2752 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 171875 6200932 Bind_0141 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan binding domain-containing protein YP_001831288.1 170001 R 395963 CDS YP_001831289.1 182677143 6198968 complement(172047..173600) 1 NC_010581.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein; two component, sigma54 specific, Fis family transcriptional regulator 173600 6198968 Bind_0142 Beijerinckia indica subsp. indica ATCC 9039 two component, sigma54 specific, Fis family transcriptional regulator YP_001831289.1 172047 R 395963 CDS YP_001831290.1 182677144 6199445 174279..174536 1 NC_010581.1 hypothetical protein 174536 6199445 Bind_0143 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831290.1 174279 D 395963 CDS YP_001831291.1 182677145 6199030 174770..175036 1 NC_010581.1 hypothetical protein 175036 6199030 Bind_0144 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831291.1 174770 D 395963 CDS YP_001831292.1 182677146 6198571 175153..177234 1 NC_010581.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: noc:Noc_1156 peptidase S9, prolyl oligopeptidase active site region; peptidase S9 prolyl oligopeptidase 177234 6198571 Bind_0145 Beijerinckia indica subsp. indica ATCC 9039 peptidase S9 prolyl oligopeptidase YP_001831292.1 175153 D 395963 CDS YP_001831293.1 182677147 6198533 complement(177222..177740) 1 NC_010581.1 KEGG: pth:PTH_0205 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 177740 6198533 Bind_0146 Beijerinckia indica subsp. indica ATCC 9039 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001831293.1 177222 R 395963 CDS YP_001831294.1 182677148 6201567 complement(177733..178506) 1 NC_010581.1 KEGG: rpe:RPE_1857 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 178506 6201567 Bind_0147 Beijerinckia indica subsp. indica ATCC 9039 dihydropteroate synthase YP_001831294.1 177733 R 395963 CDS YP_001831295.1 182677149 6201495 178808..179002 1 NC_010581.1 KEGG: bbt:BBta_1138 hypothetical protein; hypothetical protein 179002 6201495 Bind_0148 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831295.1 178808 D 395963 CDS YP_001831296.1 182677150 6200598 179040..179630 1 NC_010581.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rle:RL4317 putative cobalamin adenosultransferase; ATP--cobalamin adenosyltransferase 179630 6200598 Bind_0149 Beijerinckia indica subsp. indica ATCC 9039 ATP--cobalamin adenosyltransferase YP_001831296.1 179040 D 395963 CDS YP_001831297.1 182677151 6199570 179901..181118 1 NC_010581.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 181118 6199570 Bind_0150 Beijerinckia indica subsp. indica ATCC 9039 acetylornithine and succinylornithine aminotransferase YP_001831297.1 179901 D 395963 CDS YP_001831298.1 182677152 6201859 181115..182074 1 NC_010581.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase; ornithine carbamoyltransferase 182074 6201859 Bind_0151 Beijerinckia indica subsp. indica ATCC 9039 ornithine carbamoyltransferase YP_001831298.1 181115 D 395963 CDS YP_001831299.1 182677153 6201068 182071..183048 1 NC_010581.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 183048 hslO 6201068 hslO Beijerinckia indica subsp. indica ATCC 9039 Hsp33-like chaperonin YP_001831299.1 182071 D 395963 CDS YP_001831300.1 182677154 6200855 complement(183052..183591) 1 NC_010581.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 183591 6200855 Bind_0153 Beijerinckia indica subsp. indica ATCC 9039 tRNA/rRNA methyltransferase SpoU YP_001831300.1 183052 R 395963 CDS YP_001831301.1 182677155 6199422 184015..184533 1 NC_010581.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_2957 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 184533 6199422 Bind_0154 Beijerinckia indica subsp. indica ATCC 9039 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001831301.1 184015 D 395963 CDS YP_001831302.1 182677156 6198241 184653..185909 1 NC_010581.1 PFAM: Cytochrome b/b6 domain; KEGG: azc:AZC_3500 cytochrome b/c1; cytochrome b/b6 domain-containing protein 185909 6198241 Bind_0155 Beijerinckia indica subsp. indica ATCC 9039 cytochrome b/b6 domain-containing protein YP_001831302.1 184653 D 395963 CDS YP_001831303.1 182677157 6200755 186077..186934 1 NC_010581.1 PFAM: cytochrome c1; KEGG: rpd:RPD_1303 cytochrome c1; cytochrome c1 186934 6200755 Bind_0156 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c1 YP_001831303.1 186077 D 395963 CDS YP_001831304.1 182677158 6200859 complement(187010..187975) 1 NC_010581.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 187975 6200859 Bind_0157 Beijerinckia indica subsp. indica ATCC 9039 putative sulfite oxidase subunit YedY YP_001831304.1 187010 R 395963 CDS YP_001831305.1 182677159 6201002 188182..189057 1 NC_010581.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 189057 6201002 Bind_0158 Beijerinckia indica subsp. indica ATCC 9039 5'-methylthioadenosine phosphorylase YP_001831305.1 188182 D 395963 CDS YP_001831306.1 182677160 6201455 189054..189593 1 NC_010581.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 189593 6201455 Bind_0159 Beijerinckia indica subsp. indica ATCC 9039 adenine phosphoribosyltransferase YP_001831306.1 189054 D 395963 CDS YP_001831307.1 182677161 6201472 189641..190315 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2149 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 190315 6201472 Bind_0160 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001831307.1 189641 D 395963 CDS YP_001831308.1 182677162 6201477 190404..191636 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: rpd:RPD_3627 metallophosphoesterase; metallophosphoesterase 191636 6201477 Bind_0161 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001831308.1 190404 D 395963 CDS YP_001831309.1 182677163 6201557 191659..195204 1 NC_010581.1 KEGG: rpd:RPD_3628 hypothetical protein; hypothetical protein 195204 6201557 Bind_0162 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831309.1 191659 D 395963 CDS YP_001831310.1 182677164 6198127 complement(195469..195696) 1 NC_010581.1 hypothetical protein 195696 6198127 Bind_0163 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831310.1 195469 R 395963 CDS YP_001831311.1 182677165 6198216 complement(195851..197071) 1 NC_010581.1 PFAM: Patatin; KEGG: pnu:Pnuc_1086 patatin; patatin 197071 6198216 Bind_0164 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001831311.1 195851 R 395963 CDS YP_001831312.1 182677166 6198373 197691..198161 1 NC_010581.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_4481 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 198161 6198373 Bind_0166 Beijerinckia indica subsp. indica ATCC 9039 protein tyrosine phosphatase YP_001831312.1 197691 D 395963 CDS YP_001831313.1 182677167 6201407 198162..198980 1 NC_010581.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: mex:Mext_4482 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 198980 6201407 Bind_0167 Beijerinckia indica subsp. indica ATCC 9039 aminoglycoside phosphotransferase YP_001831313.1 198162 D 395963 CDS YP_001831314.1 182677168 6201390 complement(199001..199711) 1 NC_010581.1 KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase 199711 6201390 Bind_0168 Beijerinckia indica subsp. indica ATCC 9039 cob(II)yrinic acid a,c-diamide reductase YP_001831314.1 199001 R 395963 CDS YP_001831315.1 182677169 6198810 complement(199723..200727) 1 NC_010581.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 MaoC domain protein dehydratase; dehydratase 200727 6198810 Bind_0169 Beijerinckia indica subsp. indica ATCC 9039 dehydratase YP_001831315.1 199723 R 395963 CDS YP_001831316.1 182677170 6201420 complement(200897..201994) 1 NC_010581.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 201994 6201420 Bind_0170 Beijerinckia indica subsp. indica ATCC 9039 GTP-dependent nucleic acid-binding protein EngD YP_001831316.1 200897 R 395963 CDS YP_001831317.1 182677171 6201413 202299..203282 1 NC_010581.1 KEGG: ppg:PputGB1_1966 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 203282 6201413 Bind_0171 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001831317.1 202299 D 395963 CDS YP_001831318.1 182677172 6201746 203510..205195 1 NC_010581.1 KEGG: mex:Mext_3817 hypothetical protein; hypothetical protein 205195 6201746 Bind_0172 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831318.1 203510 D 395963 CDS YP_001831319.1 182677173 6201759 complement(205282..206178) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: oan:Oant_1403 transcriptional regulator, LysR family; LysR family transcriptional regulator 206178 6201759 Bind_0173 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831319.1 205282 R 395963 CDS YP_001831320.1 182677174 6201649 206349..207512 1 NC_010581.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sal:Sala_0308 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 207512 6201649 Bind_0174 Beijerinckia indica subsp. indica ATCC 9039 iron-containing alcohol dehydrogenase YP_001831320.1 206349 D 395963 CDS YP_001831321.1 182677175 6201819 207527..209056 1 NC_010581.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: xau:Xaut_3248 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 209056 6201819 Bind_0175 Beijerinckia indica subsp. indica ATCC 9039 methylmalonate-semialdehyde dehydrogenase YP_001831321.1 207527 D 395963 CDS YP_001831322.1 182677176 6199555 209216..210619 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: scl:sce2728 permease of the major facilitator superfamily,putative sugar transporter; major facilitator transporter 210619 6199555 Bind_0176 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001831322.1 209216 D 395963 CDS YP_001831323.1 182677177 6201327 complement(210690..212168) 1 NC_010581.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bch:Bcen2424_2586 xylulokinase; xylulokinase 212168 6201327 Bind_0177 Beijerinckia indica subsp. indica ATCC 9039 xylulokinase YP_001831323.1 210690 R 395963 CDS YP_001831324.1 182677178 6200200 212571..213314 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH00969 probable zinc ABC transporter, ATP-binding protein; ABC transporter-like protein 213314 6200200 Bind_0178 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831324.1 212571 D 395963 CDS YP_001831325.1 182677179 6200735 213323..214195 1 NC_010581.1 PFAM: ABC-3 protein; KEGG: rle:RL1048 putative transmembrane component of ABC transporter; ABC-3 protein 214195 6200735 Bind_0179 Beijerinckia indica subsp. indica ATCC 9039 ABC-3 protein YP_001831325.1 213323 D 395963 CDS YP_001831326.1 182677180 6198328 214201..215106 1 NC_010581.1 PFAM: periplasmic solute binding protein; KEGG: ret:RHE_CH00971 probable zinc ABC transporter, substrate-binding protein; periplasmic solute binding protein 215106 6198328 Bind_0180 Beijerinckia indica subsp. indica ATCC 9039 periplasmic solute binding protein YP_001831326.1 214201 D 395963 CDS YP_001831327.1 182677181 6198184 complement(215277..216266) 1 NC_010581.1 KEGG: gdi:GDI0039 hypothetical protein; hypothetical protein 216266 6198184 Bind_0181 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831327.1 215277 R 395963 CDS YP_001831328.1 182677182 6198194 complement(216679..217983) 1 NC_010581.1 PFAM: sodium:dicarboxylate symporter; KEGG: xau:Xaut_1774 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 217983 6198194 Bind_0183 Beijerinckia indica subsp. indica ATCC 9039 sodium:dicarboxylate symporter YP_001831328.1 216679 R 395963 CDS YP_001831329.1 182677183 6200374 218280..220094 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azc:AZC_3013 two-component sensor histidine kinase protein; histidine kinase 220094 6200374 Bind_0184 Beijerinckia indica subsp. indica ATCC 9039 histidine kinase YP_001831329.1 218280 D 395963 CDS YP_001831330.1 182677184 6198705 220094..221434 1 NC_010581.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azc:AZC_3012 two component response regulator; two component, sigma54 specific, Fis family transcriptional regulator 221434 6198705 Bind_0185 Beijerinckia indica subsp. indica ATCC 9039 two component, sigma54 specific, Fis family transcriptional regulator YP_001831330.1 220094 D 395963 CDS YP_001831331.1 182677185 6200172 221573..222784 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: bbt:BBta_5036 putative metallo-hydrolase/oxidoreductase; beta-lactamase domain-containing protein 222784 6200172 Bind_0186 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001831331.1 221573 D 395963 CDS YP_001831332.1 182677186 6200101 complement(222814..223422) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr5353 transcriptional regulator; TetR family transcriptional regulator 223422 6200101 Bind_0187 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831332.1 222814 R 395963 CDS YP_001831333.1 182677187 6200146 complement(223491..223739) 1 NC_010581.1 hypothetical protein 223739 6200146 Bind_0188 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831333.1 223491 R 395963 CDS YP_001831334.1 182677188 6198144 complement(223785..223946) 1 NC_010581.1 hypothetical protein 223946 6198144 Bind_0189 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831334.1 223785 R 395963 CDS YP_001831335.1 182677189 6200472 complement(224108..224269) 1 NC_010581.1 hypothetical protein 224269 6200472 Bind_0190 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831335.1 224108 R 395963 CDS YP_001831336.1 182677190 6200213 224578..226485 1 NC_010581.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: bcs:BCAN_A0498 chloride channel protein ClcB-like protein; chloride channel core protein 226485 6200213 Bind_0191 Beijerinckia indica subsp. indica ATCC 9039 chloride channel core protein YP_001831336.1 224578 D 395963 CDS YP_001831337.1 182677191 6200209 226502..227305 1 NC_010581.1 KEGG: pnu:Pnuc_0538 hypothetical protein; hypothetical protein 227305 6200209 Bind_0192 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831337.1 226502 D 395963 CDS YP_001831338.1 182677192 6200405 complement(227299..228882) 1 NC_010581.1 PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2121 outer membrane efflux protein; outer membrane efflux protein 228882 6200405 Bind_0193 Beijerinckia indica subsp. indica ATCC 9039 outer membrane efflux protein YP_001831338.1 227299 R 395963 CDS YP_001831339.1 182677193 6199753 complement(228869..230851) 1 NC_010581.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_B2120 conserved hypothetical membrane protein, putative efflux pump; fusaric acid resistance protein region 230851 6199753 Bind_0194 Beijerinckia indica subsp. indica ATCC 9039 fusaric acid resistance protein region YP_001831339.1 228869 R 395963 CDS YP_001831340.1 182677194 6200173 complement(230868..231956) 1 NC_010581.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN 231956 6200173 Bind_0195 Beijerinckia indica subsp. indica ATCC 9039 multidrug resistance protein MdtN YP_001831340.1 230868 R 395963 CDS YP_001831341.1 182677195 6198989 complement(231953..232276) 1 NC_010581.1 KEGG: bxe:Bxe_B2118 hypothetical protein; hypothetical protein 232276 6198989 Bind_0196 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831341.1 231953 R 395963 CDS YP_001831342.1 182677196 6201262 complement(232382..233179) 1 NC_010581.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: swi:Swit_2867 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 233179 6201262 Bind_0197 Beijerinckia indica subsp. indica ATCC 9039 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001831342.1 232382 R 395963 CDS YP_001831343.1 182677197 6201847 complement(233198..234406) 1 NC_010581.1 KEGG: gme:Gmet_2448 hypothetical protein; hypothetical protein 234406 6201847 Bind_0198 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831343.1 233198 R 395963 CDS YP_001831344.1 182677198 6200880 234723..235949 1 NC_010581.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: mex:Mext_0563 acetate kinase; acetate kinase 235949 6200880 Bind_0199 Beijerinckia indica subsp. indica ATCC 9039 acetate kinase YP_001831344.1 234723 D 395963 CDS YP_001831345.1 182677199 6201082 complement(236097..237086) 1 NC_010581.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: bch:Bcen2424_4872 phosphate acetyltransferase; phosphate butyryltransferase 237086 6201082 Bind_0200 Beijerinckia indica subsp. indica ATCC 9039 phosphate butyryltransferase YP_001831345.1 236097 R 395963 CDS YP_001831346.1 182677200 6198948 complement(237089..237874) 1 NC_010581.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 237874 6198948 Bind_0201 Beijerinckia indica subsp. indica ATCC 9039 enoyl-(acyl carrier protein) reductase YP_001831346.1 237089 R 395963 CDS YP_001831347.1 182677201 6199558 complement(238077..240443) 1 NC_010581.1 KEGG: bbt:BBta_3001 hypothetical protein; hypothetical protein 240443 6199558 Bind_0202 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831347.1 238077 R 395963 CDS YP_001831348.1 182677202 6201074 241450..242490 1 NC_010581.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: gsu:GSU2813 cytochrome c551 peroxidase; cytochrome-c peroxidase 242490 6201074 Bind_0203 Beijerinckia indica subsp. indica ATCC 9039 cytochrome-c peroxidase YP_001831348.1 241450 D 395963 CDS YP_001831349.1 182677203 6198467 complement(242617..242988) 1 NC_010581.1 hypothetical protein 242988 6198467 Bind_0204 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831349.1 242617 R 395963 CDS YP_001831350.1 182677204 6199031 complement(243099..243470) 1 NC_010581.1 KEGG: mex:Mext_4746 hypothetical protein; hypothetical protein 243470 6199031 Bind_0205 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831350.1 243099 R 395963 CDS YP_001831351.1 182677205 6198312 243740..244285 1 NC_010581.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: rpe:RPE_2812 riboflavin synthase; 6,7-dimethyl-8-ribityllumazine synthase 244285 6198312 Bind_0206 Beijerinckia indica subsp. indica ATCC 9039 6,7-dimethyl-8-ribityllumazine synthase YP_001831351.1 243740 D 395963 CDS YP_001831352.1 182677206 6198671 244317..244784 1 NC_010581.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rpa:RPA2729 transcription antitermination protein NusB; NusB antitermination factor 244784 6198671 Bind_0207 Beijerinckia indica subsp. indica ATCC 9039 NusB antitermination factor YP_001831352.1 244317 D 395963 CDS YP_001831353.1 182677207 6198971 244798..245793 1 NC_010581.1 KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 245793 6198971 Bind_0208 Beijerinckia indica subsp. indica ATCC 9039 thiamine-monophosphate kinase YP_001831353.1 244798 D 395963 CDS YP_001831354.1 182677208 6198751 246019..248157 1 NC_010581.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 248157 hppA 6198751 hppA Beijerinckia indica subsp. indica ATCC 9039 membrane-bound proton-translocating pyrophosphatase YP_001831354.1 246019 D 395963 CDS YP_001831355.1 182677209 6198639 248333..249238 1 NC_010581.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: nha:Nham_1059 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 249238 6198639 Bind_0210 Beijerinckia indica subsp. indica ATCC 9039 glucose-1-phosphate thymidylyltransferase YP_001831355.1 248333 D 395963 CDS YP_001831356.1 182677210 6200720 249425..250363 1 NC_010581.1 KEGG: rru:Rru_A0792 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 250363 6200720 Bind_0211 Beijerinckia indica subsp. indica ATCC 9039 serine O-acetyltransferase YP_001831356.1 249425 D 395963 CDS YP_001831357.1 182677211 6199959 250609..250758 1 NC_010581.1 hypothetical protein 250758 6199959 Bind_0212 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831357.1 250609 D 395963 CDS YP_001831358.1 182677212 6200824 250848..251837 1 NC_010581.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: atc:AGR_C_543 cysteine synthase A; cysteine synthase 251837 6200824 Bind_0213 Beijerinckia indica subsp. indica ATCC 9039 cysteine synthase YP_001831358.1 250848 D 395963 CDS YP_001831359.1 182677213 6199645 252107..252232 1 NC_010581.1 hypothetical protein 252232 6199645 Bind_0214 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831359.1 252107 D 395963 CDS YP_001831360.1 182677214 6201035 252475..253476 1 NC_010581.1 PFAM: PfkB domain protein; KEGG: nwi:Nwi_0218 PfkB; ribokinase-like domain-containing protein 253476 6201035 Bind_0215 Beijerinckia indica subsp. indica ATCC 9039 ribokinase-like domain-containing protein YP_001831360.1 252475 D 395963 CDS YP_001831361.1 182677215 6199891 complement(253564..254169) 1 NC_010581.1 KEGG: bja:blr0495 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 254169 6199891 Bind_0216 Beijerinckia indica subsp. indica ATCC 9039 3-isopropylmalate dehydratase small subunit YP_001831361.1 253564 R 395963 CDS YP_001831362.1 182677216 6199397 complement(254603..255007) 1 NC_010581.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 255007 atpC 6199397 atpC Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit epsilon YP_001831362.1 254603 R 395963 CDS YP_001831363.1 182677217 6199812 complement(255157..256605) 1 NC_010581.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 256605 6199812 Bind_0218 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit beta YP_001831363.1 255157 R 395963 CDS YP_001831364.1 182677218 6198337 complement(256632..257513) 1 NC_010581.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 257513 6198337 Bind_0219 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit gamma YP_001831364.1 256632 R 395963 CDS YP_001831365.1 182677219 6200538 complement(257652..259181) 1 NC_010581.1 KEGG: bbt:BBta_0406 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit; ATP synthase F1 subunit alpha 259181 6200538 Bind_0220 Beijerinckia indica subsp. indica ATCC 9039 ATP synthase F1 subunit alpha YP_001831365.1 257652 R 395963 CDS YP_001831366.1 182677220 6201163 complement(259181..259753) 1 NC_010581.1 KEGG: azc:AZC_4128 H+-transporting two-sector ATPase delta (OSCP) subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 259753 6201163 Bind_0221 Beijerinckia indica subsp. indica ATCC 9039 ATP synthase F1 subunit delta YP_001831366.1 259181 R 395963 CDS YP_001831367.1 182677221 6199276 complement(260062..261084) 1 NC_010581.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: rpc:RPC_0286 DNA polymerase III subunit delta; DNA polymerase III subunit delta 261084 6199276 Bind_0222 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunit delta YP_001831367.1 260062 R 395963 CDS YP_001831368.1 182677222 6198879 complement(261303..261725) 1 NC_010581.1 KEGG: bja:bll6206 hypothetical protein; hypothetical protein 261725 6198879 Bind_0223 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831368.1 261303 R 395963 CDS YP_001831369.1 182677223 6201757 complement(262172..262711) 1 NC_010581.1 KEGG: mex:Mext_1588 hypothetical protein; hypothetical protein 262711 6201757 Bind_0224 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831369.1 262172 R 395963 CDS YP_001831370.1 182677224 6198698 complement(262698..265379) 1 NC_010581.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: rpd:RPD_0436 leucyl-tRNA synthetase; leucyl-tRNA synthetase 265379 6198698 Bind_0225 Beijerinckia indica subsp. indica ATCC 9039 leucyl-tRNA synthetase YP_001831370.1 262698 R 395963 CDS YP_001831371.1 182677225 6200447 265435..266127 1 NC_010581.1 PFAM: alanine racemase domain protein; KEGG: bbt:BBta_0174 putative exported protein of unknown function; alanine racemase domain-containing protein 266127 6200447 Bind_0226 Beijerinckia indica subsp. indica ATCC 9039 alanine racemase domain-containing protein YP_001831371.1 265435 D 395963 CDS YP_001831372.1 182677226 6200117 266331..267443 1 NC_010581.1 KEGG: jan:Jann_1817 hypothetical protein; hypothetical protein 267443 6200117 Bind_0227 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831372.1 266331 D 395963 CDS YP_001831373.1 182677227 6198412 complement(267464..268141) 1 NC_010581.1 KEGG: mex:Mext_1577 hypothetical protein; hypothetical protein 268141 6198412 Bind_0228 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831373.1 267464 R 395963 CDS YP_001831374.1 182677228 6201157 268501..269187 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azc:AZC_0090 response regulator receiver; two component transcriptional regulator 269187 6201157 Bind_0229 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001831374.1 268501 D 395963 CDS YP_001831375.1 182677229 6201120 269476..269928 1 NC_010581.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding; cyclic nucleotide-binding protein 269928 6201120 Bind_0230 Beijerinckia indica subsp. indica ATCC 9039 cyclic nucleotide-binding protein YP_001831375.1 269476 D 395963 CDS YP_001831376.1 182677230 6200035 269918..270163 1 NC_010581.1 hypothetical protein 270163 6200035 Bind_0231 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831376.1 269918 D 395963 CDS YP_001831377.1 182677231 6200445 270471..271742 1 NC_010581.1 hypothetical protein 271742 6200445 Bind_0232 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831377.1 270471 D 395963 CDS YP_001831378.1 182677232 6198129 complement(271858..272667) 1 NC_010581.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: nwi:Nwi_2038 TonB like protein; TonB family protein 272667 6198129 Bind_0233 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001831378.1 271858 R 395963 CDS YP_001831379.1 182677233 6200941 complement(272702..273235) 1 NC_010581.1 TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bme:BMEI0364 biopolymer transport ExbD protein; TonB system transport protein ExbD 273235 6200941 Bind_0234 Beijerinckia indica subsp. indica ATCC 9039 TonB system transport protein ExbD YP_001831379.1 272702 R 395963 CDS YP_001831380.1 182677234 6198696 complement(273238..274305) 1 NC_010581.1 TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: xau:Xaut_4273 TonB-system energizer ExbB type-1; tonB-system energizer ExbB 274305 6198696 Bind_0235 Beijerinckia indica subsp. indica ATCC 9039 tonB-system energizer ExbB YP_001831380.1 273238 R 395963 CDS YP_001831381.1 182677235 6198972 complement(274471..275151) 1 NC_010581.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: azc:AZC_3753 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase 275151 6198972 Bind_0236 Beijerinckia indica subsp. indica ATCC 9039 2OG-Fe(II) oxygenase YP_001831381.1 274471 R 395963 CDS YP_001831382.1 182677236 6198292 complement(275239..276546) 1 NC_010581.1 PFAM: PepSY-associated TM helix domain protein; KEGG: nha:Nham_0971 hypothetical protein; PepSY-associated TM helix domain-containing protein 276546 6198292 Bind_0237 Beijerinckia indica subsp. indica ATCC 9039 PepSY-associated TM helix domain-containing protein YP_001831382.1 275239 R 395963 CDS YP_001831383.1 182677237 6201415 276861..279194 1 NC_010581.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_4578 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 279194 6201415 Bind_0238 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent siderophore receptor YP_001831383.1 276861 D 395963 CDS YP_001831384.1 182677238 6200794 complement(279202..279582) 1 NC_010581.1 hypothetical protein 279582 6200794 Bind_0239 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831384.1 279202 R 395963 CDS YP_001831385.1 182677239 6198154 complement(279751..280092) 1 NC_010581.1 PFAM: CsbD family protein; KEGG: bra:BRADO1086 conserved hypothetical protein, hypothetical UPF0337 protein; CsbD family protein 280092 6198154 Bind_0240 Beijerinckia indica subsp. indica ATCC 9039 CsbD family protein YP_001831385.1 279751 R 395963 CDS YP_001831386.1 182677240 6199778 complement(280246..281238) 1 NC_010581.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 281238 6199778 Bind_0241 Beijerinckia indica subsp. indica ATCC 9039 pantothenate kinase YP_001831386.1 280246 R 395963 CDS YP_001831387.1 182677241 6199286 complement(281228..281548) 1 NC_010581.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bra:BRADO0217 phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-ATP diphosphatase 281548 6199286 Bind_0242 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosyl-ATP diphosphatase YP_001831387.1 281228 R 395963 CDS YP_001831388.1 182677242 6200246 complement(281553..282383) 1 NC_010581.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pla:Plav_1233 imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 282383 6200246 Bind_0243 Beijerinckia indica subsp. indica ATCC 9039 Imidazole glycerol phosphate synthase cyclase subunit YP_001831388.1 281553 R 395963 CDS YP_001831389.1 182677243 6198272 282840..283886 1 NC_010581.1 PFAM: protein of unknown function DUF475; KEGG: nar:Saro_2044 protein of unknown function DUF475; hypothetical protein 283886 6198272 Bind_0244 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831389.1 282840 D 395963 CDS YP_001831390.1 182677244 6201084 complement(284018..284440) 1 NC_010581.1 PFAM: Class I peptide chain release factor; KEGG: pla:Plav_0634 class I peptide chain release factor; class I peptide chain release factor 284440 6201084 Bind_0245 Beijerinckia indica subsp. indica ATCC 9039 class I peptide chain release factor YP_001831390.1 284018 R 395963 CDS YP_001831391.1 182677245 6200825 complement(284477..285205) 1 NC_010581.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 285205 6200825 Bind_0246 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001831391.1 284477 R 395963 CDS YP_001831392.1 182677246 6200453 complement(285202..285882) 1 NC_010581.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: azc:AZC_4500 imidazole glycerol phosphate synthase; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 285882 6200453 Bind_0247 Beijerinckia indica subsp. indica ATCC 9039 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_001831392.1 285202 R 395963 CDS YP_001831393.1 182677247 6198534 complement(285879..286442) 1 NC_010581.1 KEGG: rpc:RPC_0305 hypothetical protein; hypothetical protein 286442 6198534 Bind_0248 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831393.1 285879 R 395963 CDS YP_001831394.1 182677248 6198259 complement(286478..287065) 1 NC_010581.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 287065 hisB 6198259 hisB Beijerinckia indica subsp. indica ATCC 9039 imidazoleglycerol-phosphate dehydratase YP_001831394.1 286478 R 395963 CDS YP_001831395.1 182677249 6199568 287367..287960 1 NC_010581.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 287960 6199568 Bind_0250 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent protease peptidase subunit YP_001831395.1 287367 D 395963 CDS YP_001831396.1 182677250 6198307 288011..289318 1 NC_010581.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 289318 hslU 6198307 hslU Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent protease ATP-binding subunit HslU YP_001831396.1 288011 D 395963 CDS YP_001831397.1 182677251 6199860 complement(289534..290091) 1 NC_010581.1 KEGG: mex:Mext_2857 hypothetical protein; hypothetical protein 290091 6199860 Bind_0252 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831397.1 289534 R 395963 CDS YP_001831398.1 182677252 6198214 complement(290386..291324) 1 NC_010581.1 KEGG: bbt:BBta_2002 hydrogenase expression/formation; hypothetical protein 291324 6198214 Bind_0253 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831398.1 290386 R 395963 CDS YP_001831399.1 182677253 6200467 complement(291789..292394) 1 NC_010581.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: oan:Oant_0023 recombination protein RecR; recombination protein RecR 292394 6200467 Bind_0254 Beijerinckia indica subsp. indica ATCC 9039 recombination protein RecR YP_001831399.1 291789 R 395963 CDS YP_001831400.1 182677254 6201075 complement(292475..292780) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: xau:Xaut_2167 hypothetical protein; hypothetical protein 292780 6201075 Bind_0255 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831400.1 292475 R 395963 CDS YP_001831401.1 182677255 6199517 complement(293029..294984) 1 NC_010581.1 KEGG: azc:AZC_0142 ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 294984 6199517 Bind_0256 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunits gamma and tau YP_001831401.1 293029 R 395963 CDS YP_001831402.1 182677256 6198615 295523..296500 1 NC_010581.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: bxe:Bxe_A2188 putative phosphohydrolase, MutT/NUDIX; NUDIX hydrolase 296500 6198615 Bind_0257 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001831402.1 295523 D 395963 CDS YP_001831403.1 182677257 6198202 296560..297285 1 NC_010581.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: azc:AZC_3675 ExsB protein; exsB protein 297285 6198202 Bind_0258 Beijerinckia indica subsp. indica ATCC 9039 exsB protein YP_001831403.1 296560 D 395963 CDS YP_001831404.1 182677258 6199382 297400..298527 1 NC_010581.1 KEGG: scl:sce5181 probable 3-carboxymuconate cyclase; putative 3-carboxymuconate cyclase 298527 6199382 Bind_0259 Beijerinckia indica subsp. indica ATCC 9039 putative 3-carboxymuconate cyclase YP_001831404.1 297400 D 395963 CDS YP_001831405.1 182677259 6198334 complement(298586..300319) 1 NC_010581.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mag:amb4061 superfamily II DNA and RNA helicase; DEAD/DEAH box helicase 300319 6198334 Bind_0260 Beijerinckia indica subsp. indica ATCC 9039 DEAD/DEAH box helicase YP_001831405.1 298586 R 395963 CDS YP_001831406.1 182677260 6198599 complement(300468..300698) 1 NC_010581.1 PFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31; 50S ribosomal protein L31 300698 6198599 Bind_0261 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L31 YP_001831406.1 300468 R 395963 CDS YP_001831407.1 182677261 6199228 301068..302363 1 NC_010581.1 PFAM: adenylosuccinate synthetase; KEGG: xau:Xaut_0037 adenylosuccinate synthase; adenylosuccinate synthase 302363 6199228 Bind_0262 Beijerinckia indica subsp. indica ATCC 9039 adenylosuccinate synthase YP_001831407.1 301068 D 395963 CDS YP_001831408.1 182677262 6199586 complement(304234..304647) 1 NC_010581.1 PFAM: helix-turn-helix HxlR type; KEGG: bvi:Bcep1808_5860 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 304647 6199586 Bind_0264 Beijerinckia indica subsp. indica ATCC 9039 HxlR family transcriptional regulator YP_001831408.1 304234 R 395963 CDS YP_001831409.1 182677263 6199192 304748..305560 1 NC_010581.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pst:PSPTO_0819 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 305560 6199192 Bind_0265 Beijerinckia indica subsp. indica ATCC 9039 coenzyme F420-dependent NADP oxidoreductase YP_001831409.1 304748 D 395963 CDS YP_001831410.1 182677264 6198605 complement(305606..306484) 1 NC_010581.1 PFAM: extracellular solute-binding protein family 3; KEGG: nwi:Nwi_0150 extracellular solute-binding protein, family 3; extracellular solute-binding protein 306484 6198605 Bind_0266 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001831410.1 305606 R 395963 CDS YP_001831411.1 182677265 6198880 306960..308525 1 NC_010581.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: xau:Xaut_2375 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 308525 6198880 Bind_0267 Beijerinckia indica subsp. indica ATCC 9039 uroporphyrin-III C-methyltransferase YP_001831411.1 306960 D 395963 CDS YP_001831412.1 182677266 6200480 complement(308610..309011) 1 NC_010581.1 KEGG: nwi:Nwi_0527 hypothetical protein; hypothetical protein 309011 6200480 Bind_0268 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831412.1 308610 R 395963 CDS YP_001831413.1 182677267 6199353 309554..311695 1 NC_010581.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: nwi:Nwi_3134 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 311695 6199353 Bind_0269 Beijerinckia indica subsp. indica ATCC 9039 heavy metal translocating P-type ATPase YP_001831413.1 309554 D 395963 CDS YP_001831414.1 182677268 6199029 complement(311688..313034) 1 NC_010581.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: bja:bll7152 translocation protein TolB; beta-propeller repeat-containing to-pal system protein TolB 313034 6199029 Bind_0270 Beijerinckia indica subsp. indica ATCC 9039 beta-propeller repeat-containing to-pal system protein TolB YP_001831414.1 311688 R 395963 CDS YP_001831415.1 182677269 6201021 complement(313031..314341) 1 NC_010581.1 KEGG: bcs:BCAN_A1737 TolA protein; TolA protein 314341 6201021 Bind_0271 Beijerinckia indica subsp. indica ATCC 9039 TolA protein YP_001831415.1 313031 R 395963 CDS YP_001831416.1 182677270 6198692 complement(314356..314805) 1 NC_010581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 314805 6198692 Bind_0272 Beijerinckia indica subsp. indica ATCC 9039 biopolymer transport protein ExbD/TolR YP_001831416.1 314356 R 395963 CDS YP_001831417.1 182677271 6199587 complement(314860..315585) 1 NC_010581.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA1117 TolQ protein, inner membrane protein, tolerance to group A colicins; protein TolQ 315585 6199587 Bind_0273 Beijerinckia indica subsp. indica ATCC 9039 protein TolQ YP_001831417.1 314860 R 395963 CDS YP_001831418.1 182677272 6199072 complement(316993..317574) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_6109 transcriptional regulator, TetR family; TetR family transcriptional regulator 317574 6199072 Bind_0275 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831418.1 316993 R 395963 CDS YP_001831419.1 182677273 6199588 317656..318960 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6110 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 318960 6199588 Bind_0276 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001831419.1 317656 D 395963 CDS YP_001831420.1 182677274 6199603 complement(319223..319657) 1 NC_010581.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: azc:AZC_0520 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase 319657 6199603 Bind_0277 Beijerinckia indica subsp. indica ATCC 9039 tol-pal system-associated acyl-CoA thioesterase YP_001831420.1 319223 R 395963 CDS YP_001831421.1 182677275 6198431 complement(319794..320003) 1 NC_010581.1 PFAM: TOBE domain protein; KEGG: rpa:RPA4719 molybdo-pterin binding protein; TOBE domain-containing protein 320003 6198431 Bind_0278 Beijerinckia indica subsp. indica ATCC 9039 TOBE domain-containing protein YP_001831421.1 319794 R 395963 CDS YP_001831422.1 182677276 6199054 320330..321190 1 NC_010581.1 TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: rpd:RPD_1188 ModD protein; modD protein 321190 6199054 Bind_0279 Beijerinckia indica subsp. indica ATCC 9039 modD protein YP_001831422.1 320330 D 395963 CDS YP_001831423.1 182677277 6201814 321523..322008 1 NC_010581.1 PFAM: TOBE domain protein; KEGG: bra:BRADO1761 hypothetical protein; putative molybdenum ABC transporter (ATP-binding protein) (C-ter fragment); TOBE domain-containing protein 322008 6201814 Bind_0280 Beijerinckia indica subsp. indica ATCC 9039 TOBE domain-containing protein YP_001831423.1 321523 D 395963 CDS YP_001831424.1 182677278 6199071 complement(321938..322342) 1 NC_010581.1 PFAM: regulatory protein LysR; KEGG: bra:BRADO1762 putative transcriptional regulatory protein, LysR family; putative molybdenum transport regulator, ModE; ModE family transcriptional regulator 322342 6199071 Bind_0281 Beijerinckia indica subsp. indica ATCC 9039 ModE family transcriptional regulator YP_001831424.1 321938 R 395963 CDS YP_001831425.1 182677279 6200450 complement(322555..323439) 1 NC_010581.1 KEGG: rpa:RPA4634 hypothetical protein; hypothetical protein 323439 6200450 Bind_0282 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831425.1 322555 R 395963 CDS YP_001831426.1 182677280 6200554 complement(323750..324418) 1 NC_010581.1 PFAM: dienelactone hydrolase; KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 324418 6200554 Bind_0283 Beijerinckia indica subsp. indica ATCC 9039 carboxymethylenebutenolidase YP_001831426.1 323750 R 395963 CDS YP_001831427.1 182677281 6200424 complement(324592..325755) 1 NC_010581.1 PFAM: fatty acid desaturase; KEGG: cme:CMP318C sphingolipid delta 4 desaturase protein DES-1; fatty acid desaturase 325755 6200424 Bind_0284 Beijerinckia indica subsp. indica ATCC 9039 fatty acid desaturase YP_001831427.1 324592 R 395963 CDS YP_001831428.1 182677282 6200741 complement(325977..327308) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_1567 glycosyl transferase, family 2; glycosyl transferase family protein 327308 6200741 Bind_0285 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831428.1 325977 R 395963 CDS YP_001831429.1 182677283 6200997 complement(327629..328432) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 328432 6200997 Bind_0286 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831429.1 327629 R 395963 CDS YP_001831430.1 182677284 6200823 complement(328422..328901) 1 NC_010581.1 PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_B2727 putative MaoC-like dehydratase; dehydratase 328901 6200823 Bind_0287 Beijerinckia indica subsp. indica ATCC 9039 dehydratase YP_001831430.1 328422 R 395963 CDS YP_001831431.1 182677285 6199918 complement(329148..329885) 1 NC_010581.1 PFAM: manganese containing catalase; KEGG: ava:Ava_3821 manganese containing catalase; manganese containing catalase 329885 6199918 Bind_0288 Beijerinckia indica subsp. indica ATCC 9039 manganese containing catalase YP_001831431.1 329148 R 395963 CDS YP_001831432.1 182677286 6201225 330432..330620 1 NC_010581.1 KEGG: mex:Mext_0168 hypothetical protein; hypothetical protein 330620 6201225 Bind_0289 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831432.1 330432 D 395963 CDS YP_001831433.1 182677287 6199859 330675..330923 1 NC_010581.1 hypothetical protein 330923 6199859 Bind_0290 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831433.1 330675 D 395963 CDS YP_001831434.1 182677288 6199442 330987..333641 1 NC_010581.1 KEGG: mex:Mext_4055 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicases; excinuclease ABC subunit B 333641 6199442 Bind_0291 Beijerinckia indica subsp. indica ATCC 9039 excinuclease ABC subunit B YP_001831434.1 330987 D 395963 CDS YP_001831435.1 182677289 6198921 333798..333995 1 NC_010581.1 hypothetical protein 333995 6198921 Bind_0292 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831435.1 333798 D 395963 CDS YP_001831436.1 182677290 6199441 333992..334651 1 NC_010581.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 334651 6199441 Bind_0293 Beijerinckia indica subsp. indica ATCC 9039 filamentation induced by cAMP protein fic YP_001831436.1 333992 D 395963 CDS YP_001831437.1 182677291 6198656 complement(334798..335643) 1 NC_010581.1 PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: mex:Mext_2080 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD 335643 6198656 Bind_0294 Beijerinckia indica subsp. indica ATCC 9039 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD YP_001831437.1 334798 R 395963 CDS YP_001831438.1 182677292 6199222 complement(335857..338424) 1 NC_010581.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 338424 6199222 Bind_0295 Beijerinckia indica subsp. indica ATCC 9039 outer membrane protein assembly complex, YaeT protein YP_001831438.1 335857 R 395963 CDS YP_001831439.1 182677293 6199075 complement(338684..339829) 1 NC_010581.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: xau:Xaut_4432 putative membrane-associated zinc metalloprotease; membrane-associated zinc metalloprotease 339829 6199075 Bind_0296 Beijerinckia indica subsp. indica ATCC 9039 membrane-associated zinc metalloprotease YP_001831439.1 338684 R 395963 CDS YP_001831440.1 182677294 6198749 complement(339940..341169) 1 NC_010581.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 341169 6198749 Bind_0297 Beijerinckia indica subsp. indica ATCC 9039 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001831440.1 339940 R 395963 CDS YP_001831441.1 182677295 6199268 complement(341273..342163) 1 NC_010581.1 PFAM: phosphatidate cytidylyltransferase; KEGG: azc:AZC_1698 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 342163 6199268 Bind_0298 Beijerinckia indica subsp. indica ATCC 9039 phosphatidate cytidylyltransferase YP_001831441.1 341273 R 395963 CDS YP_001831442.1 182677296 6199562 complement(342160..342960) 1 NC_010581.1 KEGG: nha:Nham_1698 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 342960 6199562 Bind_0299 Beijerinckia indica subsp. indica ATCC 9039 undecaprenyl diphosphate synthase YP_001831442.1 342160 R 395963 CDS YP_001831443.1 182677297 6199220 complement(343239..343799) 1 NC_010581.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 343799 frr 6199220 frr Beijerinckia indica subsp. indica ATCC 9039 ribosome recycling factor YP_001831443.1 343239 R 395963 CDS YP_001831444.1 182677298 6198559 complement(343900..344658) 1 NC_010581.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_4437 uridylate kinase; uridylate kinase 344658 6198559 Bind_0301 Beijerinckia indica subsp. indica ATCC 9039 uridylate kinase YP_001831444.1 343900 R 395963 CDS YP_001831445.1 182677299 6198558 344894..346576 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: gbe:GbCGDNIH1_0354 two component system histidine kinase; integral membrane sensor signal transduction histidine kinase 346576 6198558 Bind_0302 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001831445.1 344894 D 395963 CDS YP_001831446.1 182677300 6200007 complement(346582..347064) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL110290 putative acetyltransferase; N-acetyltransferase GCN5 347064 6200007 Bind_0303 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001831446.1 346582 R 395963 CDS YP_001831447.1 182677301 6200005 347183..347872 1 NC_010581.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: gbe:GbCGDNIH1_0355 two-component response regulator; two component LuxR family transcriptional regulator 347872 6200005 Bind_0304 Beijerinckia indica subsp. indica ATCC 9039 two component LuxR family transcriptional regulator YP_001831447.1 347183 D 395963 CDS YP_001831448.1 182677302 6198433 348097..350514 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xau:Xaut_1786 TonB-dependent receptor; TonB-dependent receptor 350514 6198433 Bind_0305 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001831448.1 348097 D 395963 CDS YP_001831449.1 182677303 6198409 350657..351532 1 NC_010581.1 PFAM: Chorismate mutase; KEGG: xau:Xaut_0395 chorismate mutase; hypothetical protein 351532 6198409 Bind_0306 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831449.1 350657 D 395963 CDS YP_001831450.1 182677304 6198408 351685..352821 1 NC_010581.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 352821 6198408 Bind_0307 Beijerinckia indica subsp. indica ATCC 9039 histidinol-phosphate aminotransferase YP_001831450.1 351685 D 395963 CDS YP_001831451.1 182677305 6199089 352814..353776 1 NC_010581.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: xau:Xaut_0393 arogenate dehydrogenase; arogenate dehydrogenase 353776 6199089 Bind_0308 Beijerinckia indica subsp. indica ATCC 9039 arogenate dehydrogenase YP_001831451.1 352814 D 395963 CDS YP_001831452.1 182677306 6199088 complement(353812..354711) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_pAT_270 hypothetical protein; LysR family transcriptional regulator 354711 6199088 Bind_0309 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831452.1 353812 R 395963 CDS YP_001831453.1 182677307 6199028 354810..355784 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr8188 putative dehalogenase; alpha/beta hydrolase fold protein 355784 6199028 Bind_0310 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001831453.1 354810 D 395963 CDS YP_001831454.1 182677308 6198947 complement(355939..356919) 1 NC_010581.1 PFAM: Ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: gdi:GDI2414 putative inward rectifier potassium channel; K+ channel inward rectifier domain-containing protein 356919 6198947 Bind_0311 Beijerinckia indica subsp. indica ATCC 9039 K+ channel inward rectifier domain-containing protein YP_001831454.1 355939 R 395963 CDS YP_001831455.1 182677309 6199219 357174..357392 1 NC_010581.1 hypothetical protein 357392 6199219 Bind_0312 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831455.1 357174 D 395963 CDS YP_001831456.1 182677310 6199218 357643..358053 1 NC_010581.1 hypothetical protein 358053 6199218 Bind_0313 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831456.1 357643 D 395963 CDS YP_001831457.1 182677311 6199103 358441..359901 1 NC_010581.1 PFAM: outer membrane efflux protein; KEGG: xau:Xaut_4826 outer membrane efflux protein; outer membrane efflux protein 359901 6199103 Bind_0314 Beijerinckia indica subsp. indica ATCC 9039 outer membrane efflux protein YP_001831457.1 358441 D 395963 CDS YP_001831458.1 182677312 6198918 359916..361274 1 NC_010581.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bmu:Bmul_6291 multicopper oxidase type 3; multicopper oxidase type 3 361274 6198918 Bind_0315 Beijerinckia indica subsp. indica ATCC 9039 multicopper oxidase type 3 YP_001831458.1 359916 D 395963 CDS YP_001831459.1 182677313 6199224 361306..361608 1 NC_010581.1 KEGG: bbt:BBta_p0116 hypothetical protein; hypothetical protein 361608 6199224 Bind_0316 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831459.1 361306 D 395963 CDS YP_001831460.1 182677314 6199099 361811..362329 1 NC_010581.1 KEGG: gvi:glr3185 hypothetical protein; hypothetical protein 362329 6199099 Bind_0317 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831460.1 361811 D 395963 CDS YP_001831461.1 182677315 6198693 362710..362949 1 NC_010581.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 362949 rpsU 6198693 rpsU Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S21 YP_001831461.1 362710 D 395963 CDS YP_001831462.1 182677316 6198652 363146..364051 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_1964 tetratricopeptide TPR_2 repeat protein; hypothetical protein 364051 6198652 Bind_0319 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831462.1 363146 D 395963 CDS YP_001831463.1 182677317 6200006 364293..364835 1 NC_010581.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_2958 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 364835 6200006 Bind_0320 Beijerinckia indica subsp. indica ATCC 9039 BadM/Rrf2 family transcriptional regulator YP_001831463.1 364293 D 395963 CDS YP_001831464.1 182677318 6198427 364982..366190 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: swi:Swit_2959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 366190 6198427 Bind_0321 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001831464.1 364982 D 395963 CDS YP_001831465.1 182677319 6198464 366384..366788 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_3223 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 366788 6198464 Bind_0322 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001831465.1 366384 D 395963 CDS YP_001831466.1 182677320 6199696 complement(366749..367003) 1 NC_010581.1 hypothetical protein 367003 6199696 Bind_0323 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831466.1 366749 R 395963 CDS YP_001831467.1 182677321 6199619 complement(367056..367769) 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3409 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 367769 6199619 Bind_0324 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001831467.1 367056 R 395963 CDS YP_001831468.1 182677322 6199531 368129..368392 1 NC_010581.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mag:amb1606 glutaredoxin and related protein; glutaredoxin 3 368392 6199531 Bind_0325 Beijerinckia indica subsp. indica ATCC 9039 glutaredoxin 3 YP_001831468.1 368129 D 395963 CDS YP_001831469.1 182677323 6198823 complement(368770..369747) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2784 putative dehydrogenase; short-chain dehydrogenase/reductase SDR 369747 6198823 Bind_0326 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831469.1 368770 R 395963 CDS YP_001831470.1 182677324 6198653 369815..370450 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: gdi:GDI2783 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 370450 6198653 Bind_0327 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001831470.1 369815 D 395963 CDS YP_001831471.1 182677325 6198840 370561..371913 1 NC_010581.1 PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein 371913 6198840 Bind_0328 Beijerinckia indica subsp. indica ATCC 9039 transposase IS4 family protein YP_001831471.1 370561 D 395963 CDS YP_001831472.1 182677326 6199034 complement(372248..375550) 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dsy:DSY3421 hypothetical protein; hypothetical protein 375550 6199034 Bind_0329 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831472.1 372248 R 395963 CDS YP_001831473.1 182677327 6198973 complement(375724..376209) 1 NC_010581.1 hypothetical protein 376209 6198973 Bind_0330 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831473.1 375724 R 395963 CDS YP_001831474.1 182677328 6198451 complement(376501..377355) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_0052 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 377355 6198451 Bind_0331 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831474.1 376501 R 395963 CDS YP_001831475.1 182677329 6198964 complement(377348..378571) 1 NC_010581.1 PFAM: Beta-ketoacyl synthase; KEGG: xau:Xaut_0053 beta-ketoacyl synthase; Beta-ketoacyl synthase 378571 6198964 Bind_0332 Beijerinckia indica subsp. indica ATCC 9039 Beta-ketoacyl synthase YP_001831475.1 377348 R 395963 CDS YP_001831476.1 182677330 6199440 complement(378669..379208) 1 NC_010581.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 379208 6199440 Bind_0333 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxydecanoyl-ACP dehydratase YP_001831476.1 378669 R 395963 CDS YP_001831477.1 182677331 6199533 379626..380591 1 NC_010581.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bra:BRADO5022 conserved hypothetical protein; putative signal peptide; import inner membrane translocase subunit Tim44 380591 6199533 Bind_0334 Beijerinckia indica subsp. indica ATCC 9039 import inner membrane translocase subunit Tim44 YP_001831477.1 379626 D 395963 CDS YP_001831478.1 182677332 6199439 complement(380797..381672) 1 NC_010581.1 KEGG: mlo:mlr0116 integral membrane lipid kinase-like protein; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 381672 6199439 Bind_0335 Beijerinckia indica subsp. indica ATCC 9039 undecaprenol kinase YP_001831478.1 380797 R 395963 CDS YP_001831479.1 182677333 6199093 complement(381746..381934) 1 NC_010581.1 hypothetical protein 381934 6199093 Bind_0336 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831479.1 381746 R 395963 CDS YP_001831480.1 182677334 6198919 complement(382025..382630) 1 NC_010581.1 PFAM: GrpE protein; KEGG: smd:Smed_0012 ribulose-phosphate 3-epimerase; GrpE protein HSP-70 cofactor 382630 6198919 Bind_0337 Beijerinckia indica subsp. indica ATCC 9039 GrpE protein HSP-70 cofactor YP_001831480.1 382025 R 395963 CDS YP_001831481.1 182677335 6199105 complement(382804..383640) 1 NC_010581.1 KEGG: xau:Xaut_0977 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 383640 6199105 Bind_0338 Beijerinckia indica subsp. indica ATCC 9039 putative transmembrane anti-sigma factor YP_001831481.1 382804 R 395963 CDS YP_001831482.1 182677336 6200004 complement(383637..384380) 1 NC_010581.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_0976 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 384380 6200004 Bind_0339 Beijerinckia indica subsp. indica ATCC 9039 ECF subfamily RNA polymerase sigma-24 factor YP_001831482.1 383637 R 395963 CDS YP_001831483.1 182677337 6198755 complement(384474..384866) 1 NC_010581.1 PFAM: blue (type 1) copper domain protein; KEGG: xau:Xaut_0975 blue (type 1) copper domain protein; blue (type1) copper domain-containing protein 384866 6198755 Bind_0340 Beijerinckia indica subsp. indica ATCC 9039 blue (type1) copper domain-containing protein YP_001831483.1 384474 R 395963 CDS YP_001831484.1 182677338 6199057 complement(384893..385900) 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: xau:Xaut_0974 metallophosphoesterase; metallophosphoesterase 385900 6199057 Bind_0341 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001831484.1 384893 R 395963 CDS YP_001831485.1 182677339 6198655 complement(386230..386607) 1 NC_010581.1 hypothetical protein 386607 6198655 Bind_0342 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831485.1 386230 R 395963 CDS YP_001831486.1 182677340 6199206 386806..387963 1 NC_010581.1 KEGG: sme:SMc02491 hypothetical protein; hypothetical protein 387963 6199206 Bind_0343 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831486.1 386806 D 395963 CDS YP_001831487.1 182677341 6199205 complement(388461..389162) 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver; two component transcriptional regulator 389162 6199205 Bind_0344 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001831487.1 388461 R 395963 CDS YP_001831488.1 182677342 6198748 complement(389585..390331) 1 NC_010581.1 PFAM: protein of unknown function DUF28; KEGG: azc:AZC_0510 hypothetical protein; hypothetical protein 390331 6198748 Bind_0345 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831488.1 389585 R 395963 CDS YP_001831489.1 182677343 6199095 complement(390458..391153) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: bpt:Bpet2488 putative glutathione transferase; glutathione S-transferase domain-containing protein 391153 6199095 Bind_0346 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001831489.1 390458 R 395963 CDS YP_001831490.1 182677344 6198967 complement(391322..392221) 1 NC_010581.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpe:RPE_0818 RNA polymerase, sigma 32 subunit, RpoH; RNA polymerase sigma-32 subunit RpoH 392221 6198967 Bind_0347 Beijerinckia indica subsp. indica ATCC 9039 RNA polymerase sigma-32 subunit RpoH YP_001831490.1 391322 R 395963 CDS YP_001831491.1 182677345 6198477 complement(393029..394069) 1 NC_010581.1 KEGG: xau:Xaut_1985 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 394069 6198477 Bind_0348 Beijerinckia indica subsp. indica ATCC 9039 RluA family pseudouridine synthase YP_001831491.1 393029 R 395963 CDS YP_001831492.1 182677346 6198753 394223..396025 1 NC_010581.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 396025 6198753 Bind_0349 Beijerinckia indica subsp. indica ATCC 9039 cyclic beta-1,2-glucan ABc transporter YP_001831492.1 394223 D 395963 CDS YP_001831493.1 182677347 6199035 396270..396923 1 NC_010581.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_0103 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 396923 6199035 Bind_0350 Beijerinckia indica subsp. indica ATCC 9039 Rieske (2Fe-2S) domain-containing protein YP_001831493.1 396270 D 395963 CDS YP_001831494.1 182677348 6198710 complement(397055..398236) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein 398236 6198710 Bind_0351 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831494.1 397055 R 395963 CDS YP_001831495.1 182677349 6199213 complement(398768..399910) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: ava:Ava_1119 glycosyl transferase, family 2; glycosyl transferase family protein 399910 6199213 Bind_0352 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831495.1 398768 R 395963 CDS YP_001831496.1 182677350 6198945 complement(399939..400949) 1 NC_010581.1 KEGG: sfu:Sfum_0865 radical SAM domain protein; hypothetical protein 400949 6198945 Bind_0353 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831496.1 399939 R 395963 CDS YP_001831497.1 182677351 6198752 complement(401158..402939) 1 NC_010581.1 PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase; shikimate kinase., 3-dehydroquinate synthase 402939 6198752 Bind_0354 Beijerinckia indica subsp. indica ATCC 9039 shikimate kinase., 3-dehydroquinate synthase YP_001831497.1 401158 R 395963 CDS YP_001831498.1 182677352 6199104 complement(403024..403503) 1 NC_010581.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: xau:Xaut_3765 bacterioferritin; bacterioferritin 403503 6199104 Bind_0355 Beijerinckia indica subsp. indica ATCC 9039 bacterioferritin YP_001831498.1 403024 R 395963 CDS YP_001831499.1 182677353 6199132 complement(403801..404094) 1 NC_010581.1 KEGG: mex:Mext_1764 hypothetical protein; hypothetical protein 404094 6199132 Bind_0356 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831499.1 403801 R 395963 CDS YP_001831500.1 182677354 6199289 404866..406482 1 NC_010581.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 406482 6199289 Bind_0357 Beijerinckia indica subsp. indica ATCC 9039 serine-type D-Ala-D-Ala carboxypeptidase YP_001831500.1 404866 D 395963 CDS YP_001831501.1 182677355 6199298 406828..407607 1 NC_010581.1 TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ilo:IL0792 acetoin(diacetyl) reductase; acetoin reductase 407607 6199298 Bind_0358 Beijerinckia indica subsp. indica ATCC 9039 acetoin reductase YP_001831501.1 406828 D 395963 CDS YP_001831502.1 182677356 6199055 407714..408877 1 NC_010581.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 408877 6199055 Bind_0359 Beijerinckia indica subsp. indica ATCC 9039 cobalamin synthesis protein P47K YP_001831502.1 407714 D 395963 CDS YP_001831503.1 182677357 6198594 complement(408919..409953) 1 NC_010581.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 409953 6198594 Bind_0360 Beijerinckia indica subsp. indica ATCC 9039 tryptophanyl-tRNA synthetase YP_001831503.1 408919 R 395963 CDS YP_001831504.1 182677358 6199621 complement(410160..411386) 1 NC_010581.1 KEGG: nwi:Nwi_0316 cell division transporter substrate-binding protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 411386 6199621 Bind_0361 Beijerinckia indica subsp. indica ATCC 9039 signal recognition particle-docking protein FtsY YP_001831504.1 410160 R 395963 CDS YP_001831505.1 182677359 6199059 411599..412261 1 NC_010581.1 KEGG: xau:Xaut_0022 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 412261 6199059 Bind_0362 Beijerinckia indica subsp. indica ATCC 9039 cell division ATP-binding protein FtsE YP_001831505.1 411599 D 395963 CDS YP_001831506.1 182677360 6199532 412269..413300 1 NC_010581.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2864 protein of unknown function DUF214; hypothetical protein 413300 6199532 Bind_0363 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831506.1 412269 D 395963 CDS YP_001831507.1 182677361 6199267 413757..416798 1 NC_010581.1 KEGG: psa:PST_4184 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 416798 6199267 Bind_0364 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor hybrid histidine kinase YP_001831507.1 413757 D 395963 CDS YP_001831508.1 182677362 6198917 416990..418015 1 NC_010581.1 KEGG: mex:Mext_3338 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 418015 6198917 Bind_0365 Beijerinckia indica subsp. indica ATCC 9039 nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein YP_001831508.1 416990 D 395963 CDS YP_001831509.1 182677363 6198478 418390..420642 1 NC_010581.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor; TonB-dependent siderophore receptor 420642 6198478 Bind_0366 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent siderophore receptor YP_001831509.1 418390 D 395963 CDS YP_001831510.1 182677364 6199535 join(420722..421045,421045..421485) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 421485 6199535 Bind_0367 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001831510.1 420722 D 395963 CDS YP_001831511.1 182677365 6199049 422079..422807 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3103 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 422807 6199049 Bind_0368 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001831511.1 422079 D 395963 CDS YP_001831512.1 182677366 6198649 complement(422900..425248) 1 NC_010581.1 PFAM: TonB-dependent receptor; KEGG: azo:azo3844 putative TonB-dependent receptor; TonB-dependent receptor 425248 6198649 Bind_0369 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001831512.1 422900 R 395963 CDS YP_001831513.1 182677367 6198449 425554..427422 1 NC_010581.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: mex:Mext_2754 oligoendopeptidase, PepF/M3 family; pepF/M3 family oligoendopeptidase 427422 6198449 Bind_0370 Beijerinckia indica subsp. indica ATCC 9039 pepF/M3 family oligoendopeptidase YP_001831513.1 425554 D 395963 CDS YP_001831514.1 182677368 6199042 427582..428589 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpd:BURPS668_3127 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase 428589 6199042 Bind_0371 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001831514.1 427582 D 395963 CDS YP_001831515.1 182677369 6198954 428599..431142 1 NC_010581.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: azc:AZC_0109 helicase; DEAD/DEAH box helicase 431142 6198954 Bind_0372 Beijerinckia indica subsp. indica ATCC 9039 DEAD/DEAH box helicase YP_001831515.1 428599 D 395963 CDS YP_001831516.1 182677370 6198953 431192..431923 1 NC_010581.1 KEGG: bja:blr1149 hypothetical protein; hypothetical protein 431923 6198953 Bind_0373 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831516.1 431192 D 395963 CDS YP_001831517.1 182677371 6198695 complement(432423..433220) 1 NC_010581.1 KEGG: mes:Meso_2586 hypothetical protein; hypothetical protein 433220 6198695 Bind_0374 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831517.1 432423 R 395963 CDS YP_001831518.1 182677372 6199133 complement(433609..434124) 1 NC_010581.1 PFAM: histone family protein DNA-binding protein; KEGG: bbt:BBta_4630 integration host factor alpha-subunit (IHF-alpha); histone family protein DNA-binding protein 434124 6199133 Bind_0376 Beijerinckia indica subsp. indica ATCC 9039 histone family protein DNA-binding protein YP_001831518.1 433609 R 395963 CDS YP_001831519.1 182677373 6200256 complement(434557..435342) 1 NC_010581.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: xcb:XC_0373 glycerol-3-phosphate regulon repressor; DeoR family transcriptional regulator 435342 6200256 Bind_0377 Beijerinckia indica subsp. indica ATCC 9039 DeoR family transcriptional regulator YP_001831519.1 434557 R 395963 CDS YP_001831520.1 182677374 6198407 435676..437295 1 NC_010581.1 PFAM: FAD dependent oxidoreductase; KEGG: rru:Rru_A1508 FAD dependent oxidoreductase; FAD dependent oxidoreductase 437295 6198407 Bind_0378 Beijerinckia indica subsp. indica ATCC 9039 FAD dependent oxidoreductase YP_001831520.1 435676 D 395963 CDS YP_001831521.1 182677375 6199561 437444..438172 1 NC_010581.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: tma:TM1429 glycerol uptake facilitator protein; MIP family channel protein 438172 6199561 Bind_0379 Beijerinckia indica subsp. indica ATCC 9039 MIP family channel protein YP_001831521.1 437444 D 395963 CDS YP_001831522.1 182677376 6199560 438366..439889 1 NC_010581.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: cau:Caur_3292 glycerol kinase; glycerol kinase 439889 6199560 Bind_0380 Beijerinckia indica subsp. indica ATCC 9039 glycerol kinase YP_001831522.1 438366 D 395963 CDS YP_001831523.1 182677377 6199106 440059..440922 1 NC_010581.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: sme:SMb21406 hypothetical protein; Ku protein 440922 6199106 Bind_0381 Beijerinckia indica subsp. indica ATCC 9039 Ku protein YP_001831523.1 440059 D 395963 CDS YP_001831524.1 182677378 6199130 440927..442861 1 NC_010581.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mes:Meso_1150 ATP dependent DNA ligase; DNA ligase D 442861 6199130 Bind_0382 Beijerinckia indica subsp. indica ATCC 9039 DNA ligase D YP_001831524.1 440927 D 395963 CDS YP_001831525.1 182677379 6198915 442996..443799 1 NC_010581.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: sme:SMa0426 hypothetical protein; Ku protein 443799 6198915 Bind_0383 Beijerinckia indica subsp. indica ATCC 9039 Ku protein YP_001831525.1 442996 D 395963 CDS YP_001831526.1 182677380 6199084 complement(443898..444761) 1 NC_010581.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: bhe:BH13400 putative cell filamentation protein; filamentation induced by cAMP protein fic 444761 6199084 Bind_0384 Beijerinckia indica subsp. indica ATCC 9039 filamentation induced by cAMP protein fic YP_001831526.1 443898 R 395963 CDS YP_001831527.1 182677381 6199102 complement(444768..444998) 1 NC_010581.1 hypothetical protein 444998 6199102 Bind_0385 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831527.1 444768 R 395963 CDS YP_001831528.1 182677382 6199534 445207..445824 1 NC_010581.1 KEGG: azc:AZC_2257 ATP corrinoid adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 445824 6199534 Bind_0386 Beijerinckia indica subsp. indica ATCC 9039 cob(I)alamin adenosyltransferase YP_001831528.1 445207 D 395963 CDS YP_001831529.1 182677383 6199098 445849..447315 1 NC_010581.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: azc:AZC_2258 cobyric acid synthase; cobyric acid synthase CobQ 447315 6199098 Bind_0387 Beijerinckia indica subsp. indica ATCC 9039 cobyric acid synthase CobQ YP_001831529.1 445849 D 395963 CDS YP_001831530.1 182677384 6199097 complement(447299..448312) 1 NC_010581.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: bbt:BBta_3137 cobalamin biosynthetic protein (anaerobic pathway of cobalamin biosynthesis, CobD); cobalamin biosynthesis protein CobD 448312 6199097 Bind_0388 Beijerinckia indica subsp. indica ATCC 9039 cobalamin biosynthesis protein CobD YP_001831530.1 447299 R 395963 CDS YP_001831531.1 182677385 6199096 448356..449366 1 NC_010581.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: xau:Xaut_5025 aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase 449366 6199096 Bind_0389 Beijerinckia indica subsp. indica ATCC 9039 L-threonine-O-3-phosphate decarboxylase YP_001831531.1 448356 D 395963 CDS YP_001831532.1 182677386 6198952 449704..450255 1 NC_010581.1 KEGG: bcs:BCAN_B0384 hypothetical protein; hypothetical protein 450255 6198952 Bind_0390 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831532.1 449704 D 395963 CDS YP_001831533.1 182677387 6199056 450257..450607 1 NC_010581.1 KEGG: rpc:RPC_3632 hypothetical protein; hypothetical protein 450607 6199056 Bind_0391 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831533.1 450257 D 395963 CDS YP_001831534.1 182677388 6198424 451025..452479 1 NC_010581.1 KEGG: bov:BOV_A0332 hypothetical protein; hypothetical protein 452479 6198424 Bind_0392 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831534.1 451025 D 395963 CDS YP_001831535.1 182677389 6199209 453040..454923 1 NC_010581.1 KEGG: bra:BRADO5449 Mo/Fe nitrogenase specific transcriptional regulator, NifA; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; transcriptional regulator NifA 454923 6199209 Bind_0393 Beijerinckia indica subsp. indica ATCC 9039 transcriptional regulator NifA YP_001831535.1 453040 D 395963 CDS YP_001831536.1 182677390 6199208 455322..455516 1 NC_010581.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_1043 ferredoxin; 4Fe-4S ferredoxin 455516 6199208 Bind_0394 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001831536.1 455322 D 395963 CDS YP_001831537.1 182677391 6199207 455603..456409 1 NC_010581.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: gdi:GDI0432 hypothetical protein; LRV FeS4 cluster domain-containing protein 456409 6199207 Bind_0395 Beijerinckia indica subsp. indica ATCC 9039 LRV FeS4 cluster domain-containing protein YP_001831537.1 455603 D 395963 CDS YP_001831538.1 182677392 6198825 456878..458461 1 NC_010581.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 458461 6198825 Bind_0396 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase cofactor biosynthesis protein NifB YP_001831538.1 456878 D 395963 CDS YP_001831539.1 182677393 6198824 458553..458771 1 NC_010581.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_3415 2(4Fe-4S) ferredoxin; 4Fe-4S ferredoxin 458771 6198824 Bind_0397 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001831539.1 458553 D 395963 CDS YP_001831540.1 182677394 6199076 458774..459130 1 NC_010581.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_3416 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 459130 6199076 Bind_0398 Beijerinckia indica subsp. indica ATCC 9039 iron-sulfur cluster assembly accessory protein YP_001831540.1 458774 D 395963 CDS YP_001831541.1 182677395 6198682 459142..459666 1 NC_010581.1 KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein 459666 6198682 Bind_0399 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831541.1 459142 D 395963 CDS YP_001831542.1 182677396 6199160 459656..460456 1 NC_010581.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bra:BRADO5416 conserved hypothetical protein (superfamily of ARM repeat); LRV protein Fes4 cluster in N-terminus; LRV FeS4 cluster domain-containing protein 460456 6199160 Bind_0400 Beijerinckia indica subsp. indica ATCC 9039 LRV FeS4 cluster domain-containing protein YP_001831542.1 459656 D 395963 CDS YP_001831543.1 182677397 6198579 460540..460875 1 NC_010581.1 PFAM: NifZ family protein; KEGG: azc:AZC_3419 iron-sulfur cofactor synthesis protein; NifZ family protein 460875 6198579 Bind_0401 Beijerinckia indica subsp. indica ATCC 9039 NifZ family protein YP_001831543.1 460540 D 395963 CDS YP_001831544.1 182677398 6198406 460875..461123 1 NC_010581.1 PFAM: NifZ family protein; KEGG: rpd:RPD_1069 hypothetical protein; NifZ family protein 461123 6198406 Bind_0402 Beijerinckia indica subsp. indica ATCC 9039 NifZ family protein YP_001831544.1 460875 D 395963 CDS YP_001831545.1 182677399 6199060 461390..462526 1 NC_010581.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mca:MCA0212 cysteine desulfurase; class V aminotransferase 462526 6199060 Bind_0403 Beijerinckia indica subsp. indica ATCC 9039 class V aminotransferase YP_001831545.1 461390 D 395963 CDS YP_001831546.1 182677400 6198426 462662..462874 1 NC_010581.1 TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mca:MCA0213 hypothetical protein; nitrogen fixation protein FixT 462874 6198426 Bind_0404 Beijerinckia indica subsp. indica ATCC 9039 nitrogen fixation protein FixT YP_001831546.1 462662 D 395963 CDS YP_001831547.1 182677401 6198479 462883..463158 1 NC_010581.1 KEGG: rpc:RPC_4465 hypothetical protein; hypothetical protein 463158 6198479 Bind_0405 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831547.1 462883 D 395963 CDS YP_001831548.1 182677402 6199159 463155..464306 1 NC_010581.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: xau:Xaut_0120 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 464306 6199159 Bind_0406 Beijerinckia indica subsp. indica ATCC 9039 DegT/DnrJ/EryC1/StrS aminotransferase YP_001831548.1 463155 D 395963 CDS YP_001831549.1 182677403 6199092 464379..464681 1 NC_010581.1 KEGG: azc:AZC_3424 2Fe-2S ferredoxin; 2Fe-2S ferredoxin 464681 6199092 Bind_0407 Beijerinckia indica subsp. indica ATCC 9039 2Fe-2S ferredoxin YP_001831549.1 464379 D 395963 CDS YP_001831550.1 182677404 6198423 464724..464948 1 NC_010581.1 KEGG: mca:MCA0217 hypothetical protein; hypothetical protein 464948 6198423 Bind_0408 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831550.1 464724 D 395963 CDS YP_001831551.1 182677405 6198975 464948..465802 1 NC_010581.1 KEGG: rpe:RPE_4534 hypothetical protein; hypothetical protein 465802 6198975 Bind_0409 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831551.1 464948 D 395963 CDS YP_001831552.1 182677406 6198974 465959..466393 1 NC_010581.1 PFAM: globin; KEGG: bra:BRADO5406 putative hemoglobin protein (truncated hemoglobin); globin 466393 6198974 Bind_0410 Beijerinckia indica subsp. indica ATCC 9039 globin YP_001831552.1 465959 D 395963 CDS YP_001831553.1 182677407 6198577 466377..466967 1 NC_010581.1 KEGG: pna:Pnap_2347 hypothetical protein; hypothetical protein 466967 6198577 Bind_0411 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831553.1 466377 D 395963 CDS YP_001831554.1 182677408 6200009 complement(467032..467679) 1 NC_010581.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: xau:Xaut_2059 nicotinate (nicotinamide) nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 467679 6200009 Bind_0412 Beijerinckia indica subsp. indica ATCC 9039 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001831554.1 467032 R 395963 CDS YP_001831555.1 182677409 6200008 complement(467654..468949) 1 NC_010581.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 468949 proA 6200008 proA Beijerinckia indica subsp. indica ATCC 9039 gamma-glutamyl phosphate reductase YP_001831555.1 467654 R 395963 CDS YP_001831556.1 182677410 6199210 complement(469034..470167) 1 NC_010581.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 470167 6199210 Bind_0414 Beijerinckia indica subsp. indica ATCC 9039 gamma-glutamyl kinase YP_001831556.1 469034 R 395963 CDS YP_001831557.1 182677411 6199074 complement(470191..471237) 1 NC_010581.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: xau:Xaut_2055 GTP-binding protein Obg/CgtA; GTP-binding protein Obg/CgtA 471237 6199074 Bind_0415 Beijerinckia indica subsp. indica ATCC 9039 GTP-binding protein Obg/CgtA YP_001831557.1 470191 R 395963 CDS YP_001831558.1 182677412 6199214 complement(471367..472023) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 472023 6199214 Bind_0416 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001831558.1 471367 R 395963 CDS YP_001831559.1 182677413 6199226 complement(472421..472696) 1 NC_010581.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 472696 rpmA 6199226 rpmA Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L27 YP_001831559.1 472421 R 395963 CDS YP_001831560.1 182677414 6198694 complement(472737..473048) 1 NC_010581.1 PFAM: ribosomal protein L21; KEGG: ret:RHE_CH04062 50S ribosomal protein L21; 50S ribosomal protein L21 473048 rplU 6198694 rplU Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L21 YP_001831560.1 472737 R 395963 CDS YP_001831561.1 182677415 6198651 473624..475711 1 NC_010581.1 PFAM: Peptidase M23; KEGG: mex:Mext_1023 peptidase M23B; peptidase M23 475711 6198651 Bind_0419 Beijerinckia indica subsp. indica ATCC 9039 peptidase M23 YP_001831561.1 473624 D 395963 CDS YP_001831562.1 182677416 6199291 475886..476440 1 NC_010581.1 PFAM: protein of unknown function DUF925; KEGG: psa:PST_0216 hypothetical protein; hypothetical protein 476440 6199291 Bind_0420 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831562.1 475886 D 395963 CDS YP_001831563.1 182677417 6199290 complement(476488..477147) 1 NC_010581.1 KEGG: rru:Rru_A1314 hypothetical protein; hypothetical protein 477147 6199290 Bind_0421 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831563.1 476488 R 395963 CDS YP_001831564.1 182677418 6198570 complement(477217..477939) 1 NC_010581.1 PFAM: protein of unknown function DUF1345; KEGG: dar:Daro_0590 protein of unknown function DUF1345; hypothetical protein 477939 6198570 Bind_0422 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831564.1 477217 R 395963 CDS YP_001831565.1 182677419 6199285 complement(477978..478910) 1 NC_010581.1 PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_0205 polyprenyl synthetase; polyprenyl synthetase 478910 6199285 Bind_0423 Beijerinckia indica subsp. indica ATCC 9039 polyprenyl synthetase YP_001831565.1 477978 R 395963 CDS YP_001831566.1 182677420 6198425 478979..479689 1 NC_010581.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 479689 6198425 Bind_0424 Beijerinckia indica subsp. indica ATCC 9039 monofunctional biosynthetic peptidoglycan transglycosylase YP_001831566.1 478979 D 395963 CDS YP_001831567.1 182677421 6199288 479834..480025 1 NC_010581.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 480025 rpmF 6199288 rpmF Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L32 YP_001831567.1 479834 D 395963 CDS YP_001831568.1 182677422 6199025 complement(480156..480881) 1 NC_010581.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpd:RPD_0305 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 480881 6199025 Bind_0426 Beijerinckia indica subsp. indica ATCC 9039 acetoacetyl-CoA reductase YP_001831568.1 480156 R 395963 CDS YP_001831569.1 182677423 6199299 complement(481259..482434) 1 NC_010581.1 KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 482434 6199299 Bind_0427 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA acetyltransferase YP_001831569.1 481259 R 395963 CDS YP_001831570.1 182677424 6199622 482778..483395 1 NC_010581.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bja:blr0227 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR 483395 6199622 Bind_0428 Beijerinckia indica subsp. indica ATCC 9039 polyhydroxyalkonate synthesis repressor PhaR YP_001831570.1 482778 D 395963 CDS YP_001831571.1 182677425 6198452 complement(483433..483867) 1 NC_010581.1 PFAM: protein of unknown function DUF985; KEGG: bja:blr0223 hypothetical protein; hypothetical protein 483867 6198452 Bind_0429 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831571.1 483433 R 395963 CDS YP_001831572.1 182677426 6198916 complement(483869..484639) 1 NC_010581.1 KEGG: rpe:RPE_0164 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 484639 6198916 Bind_0430 Beijerinckia indica subsp. indica ATCC 9039 hydroxyacylglutathione hydrolase YP_001831572.1 483869 R 395963 CDS YP_001831573.1 182677427 6198557 484897..485670 1 NC_010581.1 PFAM: Methyltransferase type 11; KEGG: mex:Mext_2509 methyltransferase type 11; type 11 methyltransferase 485670 6198557 Bind_0431 Beijerinckia indica subsp. indica ATCC 9039 type 11 methyltransferase YP_001831573.1 484897 D 395963 CDS YP_001831574.1 182677428 6199444 complement(485862..486563) 1 NC_010581.1 PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_3842 phospholipase/carboxylesterase; phospholipase/carboxylesterase 486563 6199444 Bind_0432 Beijerinckia indica subsp. indica ATCC 9039 phospholipase/carboxylesterase YP_001831574.1 485862 R 395963 CDS YP_001831575.1 182677429 6199086 487082..487984 1 NC_010581.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: rpc:RPC_4885 glutamyl-Q tRNA(Asp) synthetase; glutamyl-tRNA synthetase 487984 6199086 Bind_0433 Beijerinckia indica subsp. indica ATCC 9039 glutamyl-tRNA synthetase YP_001831575.1 487082 D 395963 CDS YP_001831576.1 182677430 6200257 complement(488008..489309) 1 NC_010581.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 489309 ispG 6200257 ispG Beijerinckia indica subsp. indica ATCC 9039 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001831576.1 488008 R 395963 CDS YP_001831577.1 182677431 6199100 490212..491099 1 NC_010581.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 491099 6199100 Bind_0435 Beijerinckia indica subsp. indica ATCC 9039 UTP-glucose-1-phosphate uridylyltransferase YP_001831577.1 490212 D 395963 CDS YP_001831578.1 182677432 6199618 complement(491257..491640) 1 NC_010581.1 hypothetical protein 491640 6199618 Bind_0436 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831578.1 491257 R 395963 CDS YP_001831579.1 182677433 6198839 492069..492773 1 NC_010581.1 KEGG: mag:amb3806 spore coat polysaccharide biosynthesis protein F; spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase-like protein 492773 6198839 Bind_0437 Beijerinckia indica subsp. indica ATCC 9039 spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase-like protein YP_001831579.1 492069 D 395963 CDS YP_001831580.1 182677434 6198838 complement(492805..493110) 1 NC_010581.1 hypothetical protein 493110 6198838 Bind_0438 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831580.1 492805 R 395963 CDS YP_001831581.1 182677435 6198943 complement(493213..494298) 1 NC_010581.1 KEGG: azc:AZC_2414 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 494298 6198943 Bind_0439 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001831581.1 493213 R 395963 CDS YP_001831582.1 182677436 6199990 complement(494305..494802) 1 NC_010581.1 KEGG: bra:BRADO1206 phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AirC); TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 494802 6199990 Bind_0440 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001831582.1 494305 R 395963 CDS YP_001831583.1 182677437 6199101 complement(495190..498447) 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1840 TPR repeat-containing protein; hypothetical protein 498447 6199101 Bind_0441 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831583.1 495190 R 395963 CDS YP_001831584.1 182677438 6198922 complement(498528..498746) 1 NC_010581.1 PFAM: protein of unknown function DUF465; KEGG: rpb:RPB_1449 protein of unknown function DUF465; hypothetical protein 498746 6198922 Bind_0442 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831584.1 498528 R 395963 CDS YP_001831585.1 182677439 6198541 499167..499352 1 NC_010581.1 PFAM: protein of unknown function DUF465; KEGG: xau:Xaut_2598 protein of unknown function DUF465; hypothetical protein 499352 6198541 Bind_0443 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831585.1 499167 D 395963 CDS YP_001831586.1 182677440 6198544 complement(499499..500317) 1 NC_010581.1 TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xau:Xaut_0194 exodeoxyribonuclease III Xth; exodeoxyribonuclease III Xth 500317 6198544 Bind_0444 Beijerinckia indica subsp. indica ATCC 9039 exodeoxyribonuclease III Xth YP_001831586.1 499499 R 395963 CDS YP_001831587.1 182677441 6198543 complement(500692..501498) 1 NC_010581.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 501498 6198543 Bind_0445 Beijerinckia indica subsp. indica ATCC 9039 outer membrane lipoprotein carrier protein LolA YP_001831587.1 500692 R 395963 CDS YP_001831588.1 182677442 6198545 501734..502465 1 NC_010581.1 PFAM: phospholipase/Carboxylesterase; KEGG: xau:Xaut_1494 phospholipase/carboxylesterase; phospholipase/carboxylesterase 502465 6198545 Bind_0446 Beijerinckia indica subsp. indica ATCC 9039 phospholipase/carboxylesterase YP_001831588.1 501734 D 395963 CDS YP_001831589.1 182677443 6199131 complement(502598..503755) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_2255 glycosyltransferases probably involved in cell wall biogenesis-like; glycosyl transferase family protein 503755 6199131 Bind_0447 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831589.1 502598 R 395963 CDS YP_001831590.1 182677444 6198580 504108..505031 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO5242 hypothetical protein; putative SAM-dependent methyltransferase domain; type 12 methyltransferase 505031 6198580 Bind_0448 Beijerinckia indica subsp. indica ATCC 9039 type 12 methyltransferase YP_001831590.1 504108 D 395963 CDS YP_001831591.1 182677445 6198942 complement(505107..505814) 1 NC_010581.1 PFAM: fatty acid hydroxylase; KEGG: osa:4352850 Os12g0628400; fatty acid hydroxylase 505814 6198942 Bind_0449 Beijerinckia indica subsp. indica ATCC 9039 fatty acid hydroxylase YP_001831591.1 505107 R 395963 CDS YP_001831592.1 182677446 6198561 complement(505981..506937) 1 NC_010581.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 506937 mepA 6198561 mepA Beijerinckia indica subsp. indica ATCC 9039 penicillin-insensitive murein endopeptidase YP_001831592.1 505981 R 395963 CDS YP_001831593.1 182677447 6198560 complement(506970..508244) 1 NC_010581.1 KEGG: mlo:mlr5650 ceramide glucosyltransferase; ceramide glucosyltransferase 508244 6198560 Bind_0451 Beijerinckia indica subsp. indica ATCC 9039 ceramide glucosyltransferase YP_001831593.1 506970 R 395963 CDS YP_001831594.1 182677448 6199221 508434..509300 1 NC_010581.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 509300 6199221 Bind_0452 Beijerinckia indica subsp. indica ATCC 9039 formamidopyrimidine-DNA glycosylase YP_001831594.1 508434 D 395963 CDS YP_001831595.1 182677449 6199828 complement(509389..510165) 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 510165 6199828 Bind_0453 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001831595.1 509389 R 395963 CDS YP_001831596.1 182677450 6198719 complement(510452..512272) 1 NC_010581.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: xau:Xaut_2798 GTP-binding protein TypA; GTP-binding protein TypA 512272 6198719 Bind_0454 Beijerinckia indica subsp. indica ATCC 9039 GTP-binding protein TypA YP_001831596.1 510452 R 395963 CDS YP_001831597.1 182677451 6199007 complement(513147..514844) 1 NC_010581.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: azc:AZC_2290 putative Na+/phosphate symporter; Na/Pi-cotransporter II-like protein 514844 6199007 Bind_0455 Beijerinckia indica subsp. indica ATCC 9039 Na/Pi-cotransporter II-like protein YP_001831597.1 513147 R 395963 CDS YP_001831598.1 182677452 6199186 complement(515013..515738) 1 NC_010581.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mex:Mext_4827 6-phosphogluconolactonase; 6-phosphogluconolactonase 515738 6199186 Bind_0456 Beijerinckia indica subsp. indica ATCC 9039 6-phosphogluconolactonase YP_001831598.1 515013 R 395963 CDS YP_001831599.1 182677453 6198926 complement(515796..516644) 1 NC_010581.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: nha:Nham_3274 Cof protein; cof family hydrolase 516644 6198926 Bind_0457 Beijerinckia indica subsp. indica ATCC 9039 cof family hydrolase YP_001831599.1 515796 R 395963 CDS YP_001831600.1 182677454 6199165 complement(516715..518322) 1 NC_010581.1 KEGG: mex:Mext_2523 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 518322 6199165 Bind_0458 Beijerinckia indica subsp. indica ATCC 9039 glucose-6-phosphate 1-dehydrogenase YP_001831600.1 516715 R 395963 CDS YP_001831601.1 182677455 6199317 complement(518319..519323) 1 NC_010581.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 519323 6199317 Bind_0459 Beijerinckia indica subsp. indica ATCC 9039 6-phosphogluconate dehydrogenase YP_001831601.1 518319 R 395963 CDS YP_001831602.1 182677456 6198746 complement(519488..521584) 1 NC_010581.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: mex:Mext_4501 transketolase; transketolase 521584 6198746 Bind_0460 Beijerinckia indica subsp. indica ATCC 9039 transketolase YP_001831602.1 519488 R 395963 CDS YP_001831603.1 182677457 6198976 complement(522152..522874) 1 NC_010581.1 KEGG: scl:sce0923 haloacetate dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 522874 6198976 Bind_0461 Beijerinckia indica subsp. indica ATCC 9039 haloacid dehalogenase YP_001831603.1 522152 R 395963 CDS YP_001831604.1 182677458 6198586 complement(523013..523630) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: scl:sce6962 probable glutathione S-transferase; glutathione S-transferase domain-containing protein 523630 6198586 Bind_0462 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001831604.1 523013 R 395963 CDS YP_001831605.1 182677459 6199174 523752..524654 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4490 LysR substrate-binding; LysR family transcriptional regulator 524654 6199174 Bind_0463 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831605.1 523752 D 395963 CDS YP_001831606.1 182677460 6198961 complement(524717..527383) 1 NC_010581.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE; cell division protein FtsK 527383 6198961 Bind_0464 Beijerinckia indica subsp. indica ATCC 9039 cell division protein FtsK YP_001831606.1 524717 R 395963 CDS YP_001831607.1 182677461 6198535 527600..527818 1 NC_010581.1 hypothetical protein 527818 6198535 Bind_0465 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831607.1 527600 D 395963 CDS YP_001831608.1 182677462 6199145 527790..528017 1 NC_010581.1 hypothetical protein 528017 6199145 Bind_0466 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831608.1 527790 D 395963 CDS YP_001831609.1 182677463 6199166 528094..528495 1 NC_010581.1 KEGG: nha:Nham_2959 hypothetical protein; hypothetical protein 528495 6199166 Bind_0467 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831609.1 528094 D 395963 CDS YP_001831610.1 182677464 6198506 complement(528578..529024) 1 NC_010581.1 KEGG: xau:Xaut_1672 hypothetical protein; hypothetical protein 529024 6198506 Bind_0468 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831610.1 528578 R 395963 CDS YP_001831611.1 182677465 6199146 complement(529130..529948) 1 NC_010581.1 PFAM: Rhodanese domain protein; Ankyrin; KEGG: xau:Xaut_0147 rhodanese domain protein; rhodanese domain-containing protein 529948 6199146 Bind_0469 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001831611.1 529130 R 395963 CDS YP_001831612.1 182677466 6200233 complement(530008..531978) 1 NC_010581.1 PFAM: Rhodanese domain protein; KEGG: bbt:BBta_2171 hypothetical protein; rhodanese domain-containing protein 531978 6200233 Bind_0470 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001831612.1 530008 R 395963 CDS YP_001831613.1 182677467 6198527 complement(531993..532418) 1 NC_010581.1 TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: ter:Tery_3773 nitrogenase-associated protein; nitrogenase-associated protein 532418 6198527 Bind_0471 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase-associated protein YP_001831613.1 531993 R 395963 CDS YP_001831614.1 182677468 6199928 complement(532883..533344) 1 NC_010581.1 PFAM: response regulator receiver; KEGG: bbt:BBta_5880 putative transcriptional regulatory protein (protein CheY); response regulator receiver protein 533344 6199928 Bind_0472 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001831614.1 532883 R 395963 CDS YP_001831615.1 182677469 6199524 533912..534784 1 NC_010581.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 534784 nifH 6199524 nifH Beijerinckia indica subsp. indica ATCC 9039 nitrogenase reductase YP_001831615.1 533912 D 395963 CDS YP_001831616.1 182677470 6200670 534854..536314 1 NC_010581.1 KEGG: azc:AZC_1040 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 536314 6200670 Bind_0474 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase molybdenum-iron protein subunit alpha YP_001831616.1 534854 D 395963 CDS YP_001831617.1 182677471 6198885 536398..537960 1 NC_010581.1 KEGG: xau:Xaut_0090 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 537960 6198885 Bind_0475 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase molybdenum-iron protein subunit beta YP_001831617.1 536398 D 395963 CDS YP_001831618.1 182677472 6200010 538252..540141 1 NC_010581.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 540141 6200010 Bind_0476 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_001831618.1 538252 D 395963 CDS YP_001831619.1 182677473 6200188 540154..541533 1 NC_010581.1 KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 541533 6200188 Bind_0477 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN YP_001831619.1 540154 D 395963 CDS YP_001831620.1 182677474 6200671 541570..541974 1 NC_010581.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: bbt:BBta_5920 nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX 541974 6200671 Bind_0478 Beijerinckia indica subsp. indica ATCC 9039 nitrogen fixation protein NifX YP_001831620.1 541570 D 395963 CDS YP_001831621.1 182677475 6198720 541983..542453 1 NC_010581.1 TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269; nitrogen fixation protein 542453 6198720 Bind_0479 Beijerinckia indica subsp. indica ATCC 9039 nitrogen fixation protein YP_001831621.1 541983 D 395963 CDS YP_001831622.1 182677476 6198812 542480..542680 1 NC_010581.1 PFAM: protein of unknown function DUF683; KEGG: bra:BRADO5433 conserved hypothetical protein (DUF683); hypothetical protein 542680 6198812 Bind_0480 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831622.1 542480 D 395963 CDS YP_001831623.1 182677477 6198726 542707..543018 1 NC_010581.1 TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_1034 ferredoxin; ferredoxin III 543018 6198726 Bind_0481 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin III YP_001831623.1 542707 D 395963 CDS YP_001831624.1 182677478 6198553 543029..543676 1 NC_010581.1 PFAM: NifQ family protein; KEGG: rpd:RPD_1082 NifQ; NifQ family protein 543676 6198553 Bind_0482 Beijerinckia indica subsp. indica ATCC 9039 NifQ family protein YP_001831624.1 543029 D 395963 CDS YP_001831625.1 182677479 6201284 544187..544510 1 NC_010581.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpd:RPD_1083 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 544510 6201284 Bind_0483 Beijerinckia indica subsp. indica ATCC 9039 iron-sulfur cluster assembly accessory protein YP_001831625.1 544187 D 395963 CDS YP_001831626.1 182677480 6198552 544521..544841 1 NC_010581.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rpb:RPB_0980 nitrogen-fixing NifU-like protein; NifU domain-containing protein 544841 6198552 Bind_0484 Beijerinckia indica subsp. indica ATCC 9039 NifU domain-containing protein YP_001831626.1 544521 D 395963 CDS YP_001831627.1 182677481 6198529 544916..546118 1 NC_010581.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rpa:RPA4607 putative homocitrate synthase; homocitrate synthase 546118 6198529 Bind_0485 Beijerinckia indica subsp. indica ATCC 9039 homocitrate synthase YP_001831627.1 544916 D 395963 CDS YP_001831628.1 182677482 6198817 546891..547220 1 NC_010581.1 PFAM: nitrogen fixation protein NifW; KEGG: rpd:RPD_1087 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW 547220 6198817 Bind_0486 Beijerinckia indica subsp. indica ATCC 9039 nitrogen fixation protein NifW YP_001831628.1 546891 D 395963 CDS YP_001831629.1 182677483 6200528 547376..548230 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mlo:mll5862 nitrogen fixation protein,FixA; electron transfer flavoprotein alpha/beta-subunit 548230 6200528 Bind_0487 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein alpha/beta-subunit YP_001831629.1 547376 D 395963 CDS YP_001831630.1 182677484 6198725 548256..549368 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: azc:AZC_3448 FixB protein; electron transfer flavoprotein alpha/beta-subunit 549368 6198725 Bind_0488 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein alpha/beta-subunit YP_001831630.1 548256 D 395963 CDS YP_001831631.1 182677485 6199475 549380..550681 1 NC_010581.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: azc:AZC_3449 protein FixC; electron-transferring-flavoprotein dehydrogenase 550681 6199475 Bind_0489 Beijerinckia indica subsp. indica ATCC 9039 electron-transferring-flavoprotein dehydrogenase YP_001831631.1 549380 D 395963 CDS YP_001831632.1 182677486 6198903 550739..551041 1 NC_010581.1 KEGG: xau:Xaut_0139 putative ferredoxin protein, FixX; putative ferredoxin protein, FixX 551041 6198903 Bind_0490 Beijerinckia indica subsp. indica ATCC 9039 putative ferredoxin protein, FixX YP_001831632.1 550739 D 395963 CDS YP_001831633.1 182677487 6198904 551248..551733 1 NC_010581.1 PFAM: ferric-uptake regulator; KEGG: azc:AZC_0367 putative Fe2+/Zn2+ uptake regulation protein; ferric uptake regulator family protein 551733 6198904 Bind_0491 Beijerinckia indica subsp. indica ATCC 9039 ferric uptake regulator family protein YP_001831633.1 551248 D 395963 CDS YP_001831634.1 182677488 6198912 complement(551872..552183) 1 NC_010581.1 KEGG: xau:Xaut_2910 hypothetical protein; hypothetical protein 552183 6198912 Bind_0492 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831634.1 551872 R 395963 CDS YP_001831635.1 182677489 6200523 552377..552676 1 NC_010581.1 hypothetical protein 552676 6200523 Bind_0493 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831635.1 552377 D 395963 CDS YP_001831636.1 182677490 6201443 552873..553496 1 NC_010581.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 553496 6201443 Bind_0494 Beijerinckia indica subsp. indica ATCC 9039 phosphoglyceromutase YP_001831636.1 552873 D 395963 CDS YP_001831637.1 182677491 6198514 553658..554230 1 NC_010581.1 PFAM: response regulator receiver; KEGG: psa:PST_4184 sensory box histidine kinase/response regulator; response regulator receiver protein 554230 6198514 Bind_0495 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001831637.1 553658 D 395963 CDS YP_001831638.1 182677492 6201212 554349..554930 1 NC_010581.1 KEGG: nha:Nham_3693 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 554930 6201212 Bind_0496 Beijerinckia indica subsp. indica ATCC 9039 peptide deformylase YP_001831638.1 554349 D 395963 CDS YP_001831639.1 182677493 6198486 555008..555961 1 NC_010581.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: azc:AZC_0797 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 555961 6198486 Bind_0497 Beijerinckia indica subsp. indica ATCC 9039 methionyl-tRNA formyltransferase YP_001831639.1 555008 D 395963 CDS YP_001831640.1 182677494 6198728 555948..556730 1 NC_010581.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 556730 truA 6198728 truA Beijerinckia indica subsp. indica ATCC 9039 tRNA pseudouridine synthase A YP_001831640.1 555948 D 395963 CDS YP_001831641.1 182677495 6201223 complement(556709..557038) 1 NC_010581.1 KEGG: nwi:Nwi_0402 hypothetical protein; hypothetical protein 557038 6201223 Bind_0499 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831641.1 556709 R 395963 CDS YP_001831642.1 182677496 6200234 complement(557168..557533) 1 NC_010581.1 KEGG: gvi:gll2512 hypothetical protein; hypothetical protein 557533 6200234 Bind_0500 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831642.1 557168 R 395963 CDS YP_001831643.1 182677497 6200301 complement(557591..557983) 1 NC_010581.1 KEGG: azc:AZC_4001 inner membrane protein; inner membrane protein 557983 6200301 Bind_0501 Beijerinckia indica subsp. indica ATCC 9039 inner membrane protein YP_001831643.1 557591 R 395963 CDS YP_001831644.1 182677498 6199986 complement(558076..558876) 1 NC_010581.1 KEGG: rca:Rcas_3511 hypothetical protein; hypothetical protein 558876 6199986 Bind_0502 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831644.1 558076 R 395963 CDS YP_001831645.1 182677499 6198738 559101..560261 1 NC_010581.1 KEGG: fra:Francci3_4500 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 560261 6198738 Bind_0503 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001831645.1 559101 D 395963 CDS YP_001831646.1 182677500 6198505 560248..560706 1 NC_010581.1 PFAM: cyclic nucleotide-binding; KEGG: ace:Acel_1016 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 560706 6198505 Bind_0504 Beijerinckia indica subsp. indica ATCC 9039 cyclic nucleotide-binding protein YP_001831646.1 560248 D 395963 CDS YP_001831647.1 182677501 6198699 560708..561577 1 NC_010581.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: scl:sce4573 hydroxylase or oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit 561577 6198699 Bind_0505 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase FAD/NAD(P)-binding subunit YP_001831647.1 560708 D 395963 CDS YP_001831648.1 182677502 6198530 561579..562400 1 NC_010581.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fra:Francci3_4497 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 562400 6198530 Bind_0506 Beijerinckia indica subsp. indica ATCC 9039 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001831648.1 561579 D 395963 CDS YP_001831649.1 182677503 6199452 562375..563664 1 NC_010581.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: ace:Acel_1019 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 563664 6199452 Bind_0507 Beijerinckia indica subsp. indica ATCC 9039 nickel-dependent hydrogenase large subunit YP_001831649.1 562375 D 395963 CDS YP_001831650.1 182677504 6201222 563661..564203 1 NC_010581.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: fra:Francci3_4495 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 564203 6201222 Bind_0508 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase maturation protease YP_001831650.1 563661 D 395963 CDS YP_001831651.1 182677505 6200131 complement(564495..565073) 1 NC_010581.1 PFAM: protein of unknown function DUF1058; KEGG: azc:AZC_0237 hypothetical protein; hypothetical protein 565073 6200131 Bind_0510 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831651.1 564495 R 395963 CDS YP_001831652.1 182677506 6201280 565360..566355 1 NC_010581.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_4126 glyoxylate reductase; glyoxylate reductase 566355 6201280 Bind_0511 Beijerinckia indica subsp. indica ATCC 9039 glyoxylate reductase YP_001831652.1 565360 D 395963 CDS YP_001831653.1 182677507 6200012 566414..566914 1 NC_010581.1 PFAM: heat shock protein Hsp20; KEGG: rpe:RPE_0435 heat shock protein HSP20; heat shock protein Hsp20 566914 6200012 Bind_0512 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein Hsp20 YP_001831653.1 566414 D 395963 CDS YP_001831654.1 182677508 6198743 567022..567288 1 NC_010581.1 PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150; hypothetical protein 567288 6198743 Bind_0513 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831654.1 567022 D 395963 CDS YP_001831655.1 182677509 6200236 complement(567399..567851) 1 NC_010581.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 567851 6200236 Bind_0514 Beijerinckia indica subsp. indica ATCC 9039 aspartate alpha-decarboxylase YP_001831655.1 567399 R 395963 CDS YP_001831656.1 182677510 6199306 568207..569364 1 NC_010581.1 TIGRFAM: methyltransferase FkbM family; KEGG: gbe:GbCGDNIH1_1535 methyltransferase; FkbM family methyltransferase 569364 6199306 Bind_0515 Beijerinckia indica subsp. indica ATCC 9039 FkbM family methyltransferase YP_001831656.1 568207 D 395963 CDS YP_001831657.1 182677511 6201444 569493..571271 1 NC_010581.1 KEGG: mex:Mext_3709 hypothetical protein; hypothetical protein 571271 6201444 Bind_0516 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831657.1 569493 D 395963 CDS YP_001831658.1 182677512 6200011 571299..572318 1 NC_010581.1 KEGG: eba:ebA1583 hypothetical protein; hypothetical protein 572318 6200011 Bind_0517 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831658.1 571299 D 395963 CDS YP_001831659.1 182677513 6200704 complement(572403..573428) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3168 glycosyl transferase, family 2; glycosyl transferase family protein 573428 6200704 Bind_0518 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831659.1 572403 R 395963 CDS YP_001831660.1 182677514 6200242 complement(573425..574126) 1 NC_010581.1 KEGG: spc:Sputcn32_3895 hypothetical protein; hypothetical protein 574126 6200242 Bind_0519 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831660.1 573425 R 395963 CDS YP_001831661.1 182677515 6198701 complement(574119..575618) 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3169 glycosyl transferase, group 1; group 1 glycosyl transferase 575618 6198701 Bind_0520 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831661.1 574119 R 395963 CDS YP_001831662.1 182677516 6199796 complement(576054..576551) 1 NC_010581.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 576551 6199796 Bind_0521 Beijerinckia indica subsp. indica ATCC 9039 peptide deformylase YP_001831662.1 576054 R 395963 CDS YP_001831663.1 182677517 6199614 complement(576625..577656) 1 NC_010581.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cak:Caul_2660 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 577656 6199614 Bind_0522 Beijerinckia indica subsp. indica ATCC 9039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001831663.1 576625 R 395963 CDS YP_001831664.1 182677518 6199466 complement(577693..578916) 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ppu:PP_3226 acyl-CoA dehydrogenase-related protein; acyl-CoA dehydrogenase type 2 578916 6199466 Bind_0523 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001831664.1 577693 R 395963 CDS YP_001831665.1 182677519 6199330 complement(578922..579947) 1 NC_010581.1 KEGG: pfl:PFL_1382 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family, putative; aliphatic sulfonate ABC transporter periplasmic substrate-binding protein 579947 6199330 Bind_0524 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter periplasmic substrate-binding protein YP_001831665.1 578922 R 395963 CDS YP_001831666.1 182677520 6199449 580129..581079 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_0795 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 581079 6199449 Bind_0525 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831666.1 580129 D 395963 CDS YP_001831667.1 182677521 6198484 complement(581203..582177) 1 NC_010581.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3674 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 582177 6198484 Bind_0526 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001831667.1 581203 R 395963 CDS YP_001831668.1 182677522 6198603 complement(582308..582775) 1 NC_010581.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_1617 protein TolR; protein TolR 582775 6198603 Bind_0527 Beijerinckia indica subsp. indica ATCC 9039 protein TolR YP_001831668.1 582308 R 395963 CDS YP_001831669.1 182677523 6198648 complement(582756..583496) 1 NC_010581.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mag:amb3214 biopolymer transport protein; MotA/TolQ/ExbB proton channel 583496 6198648 Bind_0528 Beijerinckia indica subsp. indica ATCC 9039 MotA/TolQ/ExbB proton channel YP_001831669.1 582756 R 395963 CDS YP_001831670.1 182677524 6199386 complement(583637..584464) 1 NC_010581.1 TIGRFAM: TonB family protein; KEGG: pfo:Pfl_3737 TonB-like; TonB family protein 584464 6199386 Bind_0529 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001831670.1 583637 R 395963 CDS YP_001831671.1 182677525 6199387 complement(584869..585375) 1 NC_010581.1 PFAM: protein of unknown function DUF55; KEGG: ret:RHE_CH00838 hypothetical protein; hypothetical protein 585375 6199387 Bind_0530 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831671.1 584869 R 395963 CDS YP_001831672.1 182677526 6198909 complement(585372..585746) 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH00839 putative glyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 585746 6198909 Bind_0531 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001831672.1 585372 R 395963 CDS YP_001831673.1 182677527 6200597 complement(585823..586518) 1 NC_010581.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: bpt:Bpet1599 hypothetical protein; helix-turn-helix type 11 domain-containing protein 586518 6200597 Bind_0532 Beijerinckia indica subsp. indica ATCC 9039 helix-turn-helix type 11 domain-containing protein YP_001831673.1 585823 R 395963 CDS YP_001831674.1 182677528 6199447 586654..587631 1 NC_010581.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pla:Plav_2215 methyltransferase type 11; type 12 methyltransferase 587631 6199447 Bind_0533 Beijerinckia indica subsp. indica ATCC 9039 type 12 methyltransferase YP_001831674.1 586654 D 395963 CDS YP_001831675.1 182677529 6200678 complement(587897..588427) 1 NC_010581.1 KEGG: vpa:VP2004 hypothetical protein; hypothetical protein 588427 6200678 Bind_0534 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831675.1 587897 R 395963 CDS YP_001831676.1 182677530 6200045 complement(588664..589626) 1 NC_010581.1 KEGG: zmo:ZMO0094 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 589626 6200045 Bind_0535 Beijerinckia indica subsp. indica ATCC 9039 biotin synthase YP_001831676.1 588664 R 395963 CDS YP_001831677.1 182677531 6200046 complement(589747..591117) 1 NC_010581.1 PFAM: Malonyl-CoA decarboxylase; KEGG: bja:blr6729 putative decarboxylase; malonyl-CoA decarboxylase 591117 6200046 Bind_0536 Beijerinckia indica subsp. indica ATCC 9039 malonyl-CoA decarboxylase YP_001831677.1 589747 R 395963 CDS YP_001831678.1 182677532 6200592 591531..592310 1 NC_010581.1 PFAM: Integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC; integral membrane protein TerC 592310 6200592 Bind_0537 Beijerinckia indica subsp. indica ATCC 9039 integral membrane protein TerC YP_001831678.1 591531 D 395963 CDS YP_001831679.1 182677533 6200047 592380..594590 1 NC_010581.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 594590 6200047 Bind_0538 Beijerinckia indica subsp. indica ATCC 9039 primosome assembly protein PriA YP_001831679.1 592380 D 395963 CDS YP_001831680.1 182677534 6199456 594649..594969 1 NC_010581.1 PFAM: ferredoxin; KEGG: mlo:msl0793 ferredoxin; ferredoxin 594969 6199456 Bind_0539 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin YP_001831680.1 594649 D 395963 CDS YP_001831681.1 182677535 6200189 complement(595121..596215) 1 NC_010581.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: mes:Meso_2201 peptidase M50; peptidase M50 596215 6200189 Bind_0540 Beijerinckia indica subsp. indica ATCC 9039 peptidase M50 YP_001831681.1 595121 R 395963 CDS YP_001831682.1 182677536 6198550 complement(596524..598029) 1 NC_010581.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq; carboxypeptidase Taq 598029 6198550 Bind_0541 Beijerinckia indica subsp. indica ATCC 9039 carboxypeptidase Taq YP_001831682.1 596524 R 395963 CDS YP_001831683.1 182677537 6200522 598222..599445 1 NC_010581.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4457 protein of unknown function DUF949; hypothetical protein 599445 6200522 Bind_0542 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831683.1 598222 D 395963 CDS YP_001831684.1 182677538 6198481 complement(599535..601517) 1 NC_010581.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 601517 6198481 Bind_0543 Beijerinckia indica subsp. indica ATCC 9039 elongation factor G YP_001831684.1 599535 R 395963 CDS YP_001831685.1 182677539 6199068 601761..602882 1 NC_010581.1 PFAM: monooxygenase FAD-binding; KEGG: atc:AGR_L_226 hypothetical protein; hypothetical protein 602882 6199068 Bind_0544 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831685.1 601761 D 395963 CDS YP_001831686.1 182677540 6198895 complement(602894..603457) 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ava:Ava_4090 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 603457 6198895 Bind_0545 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001831686.1 602894 R 395963 CDS YP_001831687.1 182677541 6199128 603905..604819 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3480 putative transcriptional regulator LysR; LysR family transcriptional regulator 604819 6199128 Bind_0546 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831687.1 603905 D 395963 CDS YP_001831688.1 182677542 6198737 complement(604867..605190) 1 NC_010581.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_4871 putative ferrodoxin; 4Fe-4S ferredoxin 605190 6198737 Bind_0547 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001831688.1 604867 R 395963 CDS YP_001831689.1 182677543 6200270 complement(605204..606814) 1 NC_010581.1 PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_4872 putative fumarate/succinate reductase flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 606814 6200270 Bind_0548 Beijerinckia indica subsp. indica ATCC 9039 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001831689.1 605204 R 395963 CDS YP_001831690.1 182677544 6200194 complement(606875..609373) 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_1708 TonB-dependent receptor; TonB-dependent receptor 609373 6200194 Bind_0549 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001831690.1 606875 R 395963 CDS YP_001831691.1 182677545 6199448 complement(609757..610587) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_0748 ABC transporter related; ABC transporter-like protein 610587 6199448 Bind_0550 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831691.1 609757 R 395963 CDS YP_001831692.1 182677546 6199378 complement(610584..611384) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3168 sulfate ester transporter permease component; binding-protein-dependent transport system inner membrane protein 611384 6199378 Bind_0551 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001831692.1 610584 R 395963 CDS YP_001831693.1 182677547 6199516 complement(611381..612241) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3169 sulfate ester transport system permease protein; binding-protein-dependent transport system inner membrane protein 612241 6199516 Bind_0552 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001831693.1 611381 R 395963 CDS YP_001831694.1 182677548 6201850 complement(612355..613464) 1 NC_010581.1 KEGG: azc:AZC_3170 sulfate ester transport system substrate-binding protein; sulfate ester transport system substrate-binding protein 613464 6201850 Bind_0553 Beijerinckia indica subsp. indica ATCC 9039 sulfate ester transport system substrate-binding protein YP_001831694.1 612355 R 395963 CDS YP_001831695.1 182677549 6200593 complement(613604..614542) 1 NC_010581.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ppg:PputGB1_0233 taurine dioxygenase; taurine dioxygenase 614542 6200593 Bind_0554 Beijerinckia indica subsp. indica ATCC 9039 taurine dioxygenase YP_001831695.1 613604 R 395963 CDS YP_001831696.1 182677550 6198516 complement(614747..616207) 1 NC_010581.1 PFAM: sulfatase; KEGG: nar:Saro_0474 sulfatase; sulfatase 616207 6198516 Bind_0555 Beijerinckia indica subsp. indica ATCC 9039 sulfatase YP_001831696.1 614747 R 395963 CDS YP_001831697.1 182677551 6200268 616467..617711 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0358 major facilitator superfamily MFS_1; major facilitator transporter 617711 6200268 Bind_0556 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001831697.1 616467 D 395963 CDS YP_001831698.1 182677552 6199514 complement(617776..618432) 1 NC_010581.1 KEGG: xau:Xaut_1107 hypothetical protein; hypothetical protein 618432 6199514 Bind_0557 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831698.1 617776 R 395963 CDS YP_001831699.1 182677553 6200259 complement(618436..619086) 1 NC_010581.1 PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2924 protein of unknown function DUF162; hypothetical protein 619086 6200259 Bind_0558 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831699.1 618436 R 395963 CDS YP_001831700.1 182677554 6200095 complement(619083..620549) 1 NC_010581.1 PFAM: protein of unknown function DUF162; KEGG: pde:Pden_2925 iron-sulfur cluster binding protein; hypothetical protein 620549 6200095 Bind_0559 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831700.1 619083 R 395963 CDS YP_001831701.1 182677555 6199176 complement(620555..621352) 1 NC_010581.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pde:Pden_2926 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 621352 6199176 Bind_0560 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831701.1 620555 R 395963 CDS YP_001831702.1 182677556 6199148 complement(621551..623233) 1 NC_010581.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: azc:AZC_4251 L-lactate transport precursor; L-lactate transport 623233 6199148 Bind_0561 Beijerinckia indica subsp. indica ATCC 9039 L-lactate transport YP_001831702.1 621551 R 395963 CDS YP_001831703.1 182677557 6199394 complement(623400..624050) 1 NC_010581.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase; maleylacetoacetate isomerase 624050 6199394 Bind_0562 Beijerinckia indica subsp. indica ATCC 9039 maleylacetoacetate isomerase YP_001831703.1 623400 R 395963 CDS YP_001831704.1 182677558 6199325 624126..624563 1 NC_010581.1 PFAM: protein of unknown function UPF0066; KEGG: xau:Xaut_4390 protein of unknown function UPF0066; hypothetical protein 624563 6199325 Bind_0563 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831704.1 624126 D 395963 CDS YP_001831705.1 182677559 6200260 complement(624679..626064) 1 NC_010581.1 PFAM: Citrate transporter; KEGG: rso:RSc2518 hypothetical protein; citrate transporter 626064 6200260 Bind_0564 Beijerinckia indica subsp. indica ATCC 9039 citrate transporter YP_001831705.1 624679 R 395963 CDS YP_001831706.1 182677560 6198702 626696..628234 1 NC_010581.1 KEGG: rpe:RPE_0360 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 628234 6198702 Bind_0565 Beijerinckia indica subsp. indica ATCC 9039 Mg chelatase subunit ChlI YP_001831706.1 626696 D 395963 CDS YP_001831707.1 182677561 6198700 628327..629898 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bam:Bamb_5661 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 629898 6198700 Bind_0566 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001831707.1 628327 D 395963 CDS YP_001831708.1 182677562 6199155 complement(629939..631519) 1 NC_010581.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: rpc:RPC_0415 RNA polymerase factor sigma-54; RNA polymerase sigma-54 subunit RpoN 631519 6199155 Bind_0567 Beijerinckia indica subsp. indica ATCC 9039 RNA polymerase sigma-54 subunit RpoN YP_001831708.1 629939 R 395963 CDS YP_001831709.1 182677563 6199476 complement(632053..632988) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3926 putative ABC transporter ATP-binding protein in NtrA/RpoN 5'region; ABC transporter-like protein 632988 6199476 Bind_0568 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831709.1 632053 R 395963 CDS YP_001831710.1 182677564 6198480 complement(632985..633218) 1 NC_010581.1 hypothetical protein 633218 6198480 Bind_0569 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831710.1 632985 R 395963 CDS YP_001831711.1 182677565 6199373 complement(633384..634022) 1 NC_010581.1 PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein; OstA family protein 634022 6199373 Bind_0570 Beijerinckia indica subsp. indica ATCC 9039 OstA family protein YP_001831711.1 633384 R 395963 CDS YP_001831712.1 182677566 6199454 complement(634019..634744) 1 NC_010581.1 PFAM: protein of unknown function DUF1239; KEGG: bbt:BBta_0124 hypothetical protein; hypothetical protein 634744 6199454 Bind_0571 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831712.1 634019 R 395963 CDS YP_001831713.1 182677567 6200675 complement(634832..635446) 1 NC_010581.1 PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease; 3'-5' exonuclease 635446 6200675 Bind_0572 Beijerinckia indica subsp. indica ATCC 9039 3'-5' exonuclease YP_001831713.1 634832 R 395963 CDS YP_001831714.1 182677568 6198614 635767..636999 1 NC_010581.1 KEGG: azc:AZC_0229 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 636999 6198614 Bind_0573 Beijerinckia indica subsp. indica ATCC 9039 homoserine O-acetyltransferase YP_001831714.1 635767 D 395963 CDS YP_001831715.1 182677569 6198438 637002..637649 1 NC_010581.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; methionine biosynthesis protein MetW 637649 6198438 Bind_0574 Beijerinckia indica subsp. indica ATCC 9039 methionine biosynthesis protein MetW YP_001831715.1 637002 D 395963 CDS YP_001831716.1 182677570 6200269 637724..639091 1 NC_010581.1 PFAM: amino acid permease-associated region; KEGG: rso:RS02383 probable amino acid transporter transmembrane protein; amino acid permease-associated protein 639091 6200269 Bind_0575 Beijerinckia indica subsp. indica ATCC 9039 amino acid permease-associated protein YP_001831716.1 637724 D 395963 CDS YP_001831717.1 182677571 6199179 complement(639099..640721) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_0622 ABC transporter, ATP-binding protein; ABC transporter-like protein 640721 6199179 Bind_0576 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831717.1 639099 R 395963 CDS YP_001831718.1 182677572 6199512 640923..641837 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_2363 transcriptional regulator, LysR family; LysR family transcriptional regulator 641837 6199512 Bind_0577 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831718.1 640923 D 395963 CDS YP_001831719.1 182677573 6199479 641957..642835 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0756 beta-lactamase domain protein; beta-lactamase domain-containing protein 642835 6199479 Bind_0578 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001831719.1 641957 D 395963 CDS YP_001831720.1 182677574 6198483 complement(642844..643758) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3780 putative LysR family transcriptional regulator; LysR family transcriptional regulator 643758 6198483 Bind_0579 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831720.1 642844 R 395963 CDS YP_001831721.1 182677575 6200097 643870..644637 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR 644637 6200097 Bind_0580 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831721.1 643870 D 395963 CDS YP_001831722.1 182677576 6198554 644655..645548 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rle:RL3778 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 645548 6198554 Bind_0581 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831722.1 644655 D 395963 CDS YP_001831723.1 182677577 6198555 complement(645606..647222) 1 NC_010581.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bmu:Bmul_4948 Na+/H+ antiporter; Na+/H+ antiporter 647222 6198555 Bind_0582 Beijerinckia indica subsp. indica ATCC 9039 Na+/H+ antiporter YP_001831723.1 645606 R 395963 CDS YP_001831724.1 182677578 6198740 complement(647390..647923) 1 NC_010581.1 PFAM: Inorganic pyrophosphatase; KEGG: xau:Xaut_2496 inorganic diphosphatase; inorganic diphosphatase 647923 6198740 Bind_0583 Beijerinckia indica subsp. indica ATCC 9039 inorganic diphosphatase YP_001831724.1 647390 R 395963 CDS YP_001831725.1 182677579 6200521 complement(648109..648633) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0410 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 648633 6200521 Bind_0584 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001831725.1 648109 R 395963 CDS YP_001831726.1 182677580 6199392 complement(648895..650271) 1 NC_010581.1 KEGG: mex:Mext_2339 hypothetical protein; hypothetical protein 650271 6199392 Bind_0585 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831726.1 648895 R 395963 CDS YP_001831727.1 182677581 6201283 complement(650306..651058) 1 NC_010581.1 PFAM: Nucleotidyl transferase; KEGG: rpc:RPC_0385 nucleotidyl transferase; nucleotidyl transferase 651058 6201283 Bind_0586 Beijerinckia indica subsp. indica ATCC 9039 nucleotidyl transferase YP_001831727.1 650306 R 395963 CDS YP_001831728.1 182677582 6200043 complement(651165..652853) 1 NC_010581.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: mex:Mext_4431 protein of unknown function UPF0079; hypothetical protein 652853 6200043 Bind_0587 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831728.1 651165 R 395963 CDS YP_001831729.1 182677583 6199326 complement(653445..656156) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4432 ATP-binding region ATPase domain protein; histidine kinase 656156 6199326 Bind_0588 Beijerinckia indica subsp. indica ATCC 9039 histidine kinase YP_001831729.1 653445 R 395963 CDS YP_001831730.1 182677584 6198899 complement(656484..657893) 1 NC_010581.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 657893 6198899 Bind_0589 Beijerinckia indica subsp. indica ATCC 9039 S-adenosyl-L-homocysteine hydrolase YP_001831730.1 656484 R 395963 CDS YP_001831731.1 182677585 6200016 complement(657967..659211) 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A0734 glycosyltransferase-like protein; group 1 glycosyl transferase 659211 6200016 Bind_0590 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831731.1 657967 R 395963 CDS YP_001831732.1 182677586 6199150 complement(659588..660784) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: gvi:gll1794 probable glycosyltransferase; glycosyl transferase family protein 660784 6199150 Bind_0591 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831732.1 659588 R 395963 CDS YP_001831733.1 182677587 6200676 661447..662301 1 NC_010581.1 KEGG: ana:alr0587 unknown protein; hypothetical protein 662301 6200676 Bind_0592 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831733.1 661447 D 395963 CDS YP_001831734.1 182677588 6200195 662465..663625 1 NC_010581.1 KEGG: mag:amb3714 predicted permease; permease-like protein 663625 6200195 Bind_0593 Beijerinckia indica subsp. indica ATCC 9039 permease-like protein YP_001831734.1 662465 D 395963 CDS YP_001831735.1 182677589 6199320 complement(663770..664552) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmt:PMT0108 ABC transporter, ATP binding protein; ABC transporter-like protein 664552 6199320 Bind_0594 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831735.1 663770 R 395963 CDS YP_001831736.1 182677590 6201215 complement(664542..665345) 1 NC_010581.1 PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A3799 ABC O-antigen/lipopolysaccharide exporter, inner membrane subunit; ABC-2 type transporter 665345 6201215 Bind_0595 Beijerinckia indica subsp. indica ATCC 9039 ABC-2 type transporter YP_001831736.1 664542 R 395963 CDS YP_001831737.1 182677591 6200303 665986..667584 1 NC_010581.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: azc:AZC_3545 2-isopropylmalate synthase; 2-isopropylmalate synthase 667584 6200303 Bind_0596 Beijerinckia indica subsp. indica ATCC 9039 2-isopropylmalate synthase YP_001831737.1 665986 D 395963 CDS YP_001831738.1 182677592 6201852 669431..669634 1 NC_010581.1 KEGG: xau:Xaut_4348 hypothetical protein; hypothetical protein 669634 6201852 Bind_0598 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831738.1 669431 D 395963 CDS YP_001831739.1 182677593 6198528 complement(669780..669995) 1 NC_010581.1 hypothetical protein 669995 6198528 Bind_0599 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831739.1 669780 R 395963 CDS YP_001831740.1 182677594 6200245 complement(670223..670615) 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sus:Acid_1340 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 670615 6200245 Bind_0600 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001831740.1 670223 R 395963 CDS YP_001831741.1 182677595 6199125 670972..671478 1 NC_010581.1 KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein 671478 6199125 Bind_0601 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831741.1 670972 D 395963 CDS YP_001831742.1 182677596 6200196 complement(671530..671781) 1 NC_010581.1 KEGG: bja:bll7386 hypothetical protein; hypothetical protein 671781 6200196 Bind_0602 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831742.1 671530 R 395963 CDS YP_001831743.1 182677597 6201213 complement(671892..672338) 1 NC_010581.1 KEGG: gox:GOX1434 hypothetical protein; hypothetical protein 672338 6201213 Bind_0603 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831743.1 671892 R 395963 CDS YP_001831744.1 182677598 6201214 672567..678041 1 NC_010581.1 PFAM: alpha-2-macroglobulin domain protein; N/apple PAN domain protein; alpha-2-macroglobulin domain protein 2; KEGG: sme:SMb21298 conserved hypothetical protein, possibly exported; alpha-2-macroglobulin domain-containing protein 678041 6201214 Bind_0604 Beijerinckia indica subsp. indica ATCC 9039 alpha-2-macroglobulin domain-containing protein YP_001831744.1 672567 D 395963 CDS YP_001831745.1 182677599 6200529 678038..680113 1 NC_010581.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: rle:pRL110012 putative penicillin-binding family protein; penicillin-binding protein 1C 680113 6200529 Bind_0605 Beijerinckia indica subsp. indica ATCC 9039 penicillin-binding protein 1C YP_001831745.1 678038 D 395963 CDS YP_001831746.1 182677600 6199321 complement(687310..688011) 1 NC_010581.1 PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; integrase catalytic subunit 688011 6199321 Bind_0607 Beijerinckia indica subsp. indica ATCC 9039 integrase catalytic subunit YP_001831746.1 687310 R 395963 CDS YP_001831747.1 182677601 6198822 complement(688091..689008) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mes:Meso_3689 transcriptional regulator, AraC family; AraC family transcriptional regulator 689008 6198822 Bind_0608 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001831747.1 688091 R 395963 CDS YP_001831748.1 182677602 6199232 689591..690037 1 NC_010581.1 KEGG: rle:RL3207 hypothetical protein; hypothetical protein 690037 6199232 Bind_0609 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831748.1 689591 D 395963 CDS YP_001831749.1 182677603 6198741 690127..690486 1 NC_010581.1 hypothetical protein 690486 6198741 Bind_0610 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831749.1 690127 D 395963 CDS YP_001831750.1 182677604 6201441 690683..691354 1 NC_010581.1 KEGG: mlo:mll4938 hypothetical protein; hypothetical protein 691354 6201441 Bind_0611 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831750.1 690683 D 395963 CDS YP_001831751.1 182677605 6199477 691422..692105 1 NC_010581.1 PFAM: carbonic anhydrase; KEGG: gdi:GDI2188 carbonic anhydrase 1; carbonate dehydratase 692105 6199477 Bind_0612 Beijerinckia indica subsp. indica ATCC 9039 carbonate dehydratase YP_001831751.1 691422 D 395963 CDS YP_001831752.1 182677606 6198867 complement(692186..694117) 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_1499 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 694117 6198867 Bind_0613 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001831752.1 692186 R 395963 CDS YP_001831753.1 182677607 6199301 complement(694305..695093) 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mag:amb0634 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase 695093 6199301 Bind_0614 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001831753.1 694305 R 395963 CDS YP_001831754.1 182677608 6198911 complement(695134..696021) 1 NC_010581.1 KEGG: rle:pRL110406 putative 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 696021 6198911 Bind_0615 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxyisobutyrate dehydrogenase YP_001831754.1 695134 R 395963 CDS YP_001831755.1 182677609 6201442 complement(696068..697102) 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: atc:AGR_L_2647 probable enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 697102 6201442 Bind_0616 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001831755.1 696068 R 395963 CDS YP_001831756.1 182677610 6199513 complement(697127..698269) 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2190 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 698269 6199513 Bind_0617 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase domain-containing protein YP_001831756.1 697127 R 395963 CDS YP_001831757.1 182677611 6201853 complement(698286..699785) 1 NC_010581.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: azc:AZC_0575 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 699785 6201853 Bind_0618 Beijerinckia indica subsp. indica ATCC 9039 methylmalonate-semialdehyde dehydrogenase YP_001831757.1 698286 R 395963 CDS YP_001831758.1 182677612 6199354 699934..700839 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_2194 transcriptional regulator, LysR family; LysR family transcriptional regulator 700839 6199354 Bind_0619 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831758.1 699934 D 395963 CDS YP_001831759.1 182677613 6199518 complement(700952..701719) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3524 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 701719 6199518 Bind_0620 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001831759.1 700952 R 395963 CDS YP_001831760.1 182677614 6199519 complement(701745..702428) 1 NC_010581.1 KEGG: bmu:Bmul_6011 hypothetical protein; hypothetical protein 702428 6199519 Bind_0621 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831760.1 701745 R 395963 CDS YP_001831761.1 182677615 6199178 complement(702502..703425) 1 NC_010581.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI1197 D-2-hydroxyacid dehydrogensase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 703425 6199178 Bind_0622 Beijerinckia indica subsp. indica ATCC 9039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001831761.1 702502 R 395963 CDS YP_001831762.1 182677616 6200679 complement(703640..704401) 1 NC_010581.1 KEGG: gdi:GDI1198 putative 2-keto-4-pentenoate hydratase-like; putative 2-keto-4-pentenoate hydratase-like protein 704401 6200679 Bind_0623 Beijerinckia indica subsp. indica ATCC 9039 putative 2-keto-4-pentenoate hydratase-like protein YP_001831762.1 703640 R 395963 CDS YP_001831763.1 182677617 6200680 complement(704398..705444) 1 NC_010581.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: csa:Csal_0272 transcriptional regulator, LacI family; LacI family transcriptional regulator 705444 6200680 Bind_0624 Beijerinckia indica subsp. indica ATCC 9039 LacI family transcriptional regulator YP_001831763.1 704398 R 395963 CDS YP_001831764.1 182677618 6199149 705799..706299 1 NC_010581.1 KEGG: gdi:GDI3115 shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase 706299 6199149 Bind_0625 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate kinase YP_001831764.1 705799 D 395963 CDS YP_001831765.1 182677619 6199303 706949..707953 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI1200 oxidoreductase protein; oxidoreductase domain-containing protein 707953 6199303 Bind_0626 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase domain-containing protein YP_001831765.1 706949 D 395963 CDS YP_001831766.1 182677620 6200258 707950..709386 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ecc:c5022 putative transmembrane transport protein; major facilitator transporter 709386 6200258 Bind_0627 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001831766.1 707950 D 395963 CDS YP_001831767.1 182677621 6200018 709626..711215 1 NC_010581.1 PFAM: porin; KEGG: mex:Mext_3186 porin; porin 711215 6200018 Bind_0628 Beijerinckia indica subsp. indica ATCC 9039 porin YP_001831767.1 709626 D 395963 CDS YP_001831768.1 182677622 6199480 711247..711903 1 NC_010581.1 KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 711903 6199480 Bind_0629 Beijerinckia indica subsp. indica ATCC 9039 2-dehydro-3-deoxyphosphogluconate aldolase YP_001831768.1 711247 D 395963 CDS YP_001831769.1 182677623 6198724 711960..713393 1 NC_010581.1 KEGG: reh:H16_A3602 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 713393 6198724 Bind_0630 Beijerinckia indica subsp. indica ATCC 9039 pyruvate kinase YP_001831769.1 711960 D 395963 CDS YP_001831770.1 182677624 6199374 713653..714267 1 NC_010581.1 hypothetical protein 714267 6199374 Bind_0631 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831770.1 713653 D 395963 CDS YP_001831771.1 182677625 6199799 714310..714669 1 NC_010581.1 KEGG: xfa:XF1673 hypothetical protein; hypothetical protein 714669 6199799 Bind_0632 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831771.1 714310 D 395963 CDS YP_001831772.1 182677626 6198902 714666..716195 1 NC_010581.1 PFAM: protein of unknown function DUF264; KEGG: bvi:Bcep1808_1170 protein of unknown function DUF264; hypothetical protein 716195 6198902 Bind_0633 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831772.1 714666 D 395963 CDS YP_001831773.1 182677627 6198732 716295..717659 1 NC_010581.1 KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein; putative phage associated protein 717659 6198732 Bind_0634 Beijerinckia indica subsp. indica ATCC 9039 putative phage associated protein YP_001831773.1 716295 D 395963 CDS YP_001831774.1 182677628 6199327 717723..719054 1 NC_010581.1 KEGG: ngo:NGO0497 hypothetical protein, putative phage associated protein; hypothetical protein 719054 6199327 Bind_0635 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831774.1 717723 D 395963 CDS YP_001831775.1 182677629 6199377 719156..720670 1 NC_010581.1 KEGG: ngo:NGO0498 hypothetical protein, putative phage associated protein; putative phage associated protein 720670 6199377 Bind_0636 Beijerinckia indica subsp. indica ATCC 9039 putative phage associated protein YP_001831775.1 719156 D 395963 CDS YP_001831776.1 182677630 6201282 720697..721047 1 NC_010581.1 hypothetical protein 721047 6201282 Bind_0637 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831776.1 720697 D 395963 CDS YP_001831777.1 182677631 6199450 721057..721884 1 NC_010581.1 KEGG: mag:amb1781 hypothetical protein; hypothetical protein 721884 6199450 Bind_0638 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831777.1 721057 D 395963 CDS YP_001831778.1 182677632 6199129 721878..722303 1 NC_010581.1 hypothetical protein 722303 6199129 Bind_0639 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831778.1 721878 D 395963 CDS YP_001831779.1 182677633 6199370 722300..722734 1 NC_010581.1 KEGG: aci:ACIAD2161 hypothetical protein; hypothetical protein 722734 6199370 Bind_0640 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831779.1 722300 D 395963 CDS YP_001831780.1 182677634 6199612 722843..723586 1 NC_010581.1 KEGG: aci:ACIAD2160 hypothetical protein; hypothetical protein 723586 6199612 Bind_0641 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831780.1 722843 D 395963 CDS YP_001831781.1 182677635 6198637 723588..723926 1 NC_010581.1 hypothetical protein 723926 6198637 Bind_0642 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831781.1 723588 D 395963 CDS YP_001831782.1 182677636 6199107 724210..725559 1 NC_010581.1 KEGG: aci:ACIAD2156 hypothetical protein; putative phage tail tape meausure protein; hypothetical protein 725559 6199107 Bind_0643 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831782.1 724210 D 395963 CDS YP_001831783.1 182677637 6200744 complement(725568..726149) 1 NC_010581.1 KEGG: aba:Acid345_4695 nuclease-related protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein 726149 6200744 Bind_0644 Beijerinckia indica subsp. indica ATCC 9039 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein YP_001831783.1 725568 R 395963 CDS YP_001831784.1 182677638 6201067 complement(726475..726759) 1 NC_010581.1 hypothetical protein 726759 6201067 Bind_0645 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831784.1 726475 R 395963 CDS YP_001831785.1 182677639 6198636 726915..727466 1 NC_010581.1 KEGG: azo:azo2957 hypothetical protein; hypothetical protein 727466 6198636 Bind_0646 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831785.1 726915 D 395963 CDS YP_001831786.1 182677640 6199121 complement(727636..728172) 1 NC_010581.1 PFAM: Chromate transporter; KEGG: ana:all1110 chromate transport protein; chromate transporter 728172 6199121 Bind_0647 Beijerinckia indica subsp. indica ATCC 9039 chromate transporter YP_001831786.1 727636 R 395963 CDS YP_001831787.1 182677641 6201796 complement(728169..728765) 1 NC_010581.1 PFAM: Chromate transporter; KEGG: ccr:CC_1097 chromate transporter, putative; chromate transporter 728765 6201796 Bind_0648 Beijerinckia indica subsp. indica ATCC 9039 chromate transporter YP_001831787.1 728169 R 395963 CDS YP_001831788.1 182677642 6200666 complement(728865..729335) 1 NC_010581.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC; DNA polymerase III chi subunit HolC 729335 6200666 Bind_0649 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III chi subunit HolC YP_001831788.1 728865 R 395963 CDS YP_001831789.1 182677643 6201176 complement(729346..730974) 1 NC_010581.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bja:blr4108 leucyl aminopeptidase; leucyl aminopeptidase 730974 6201176 Bind_0650 Beijerinckia indica subsp. indica ATCC 9039 leucyl aminopeptidase YP_001831789.1 729346 R 395963 CDS YP_001831790.1 182677644 6201092 731720..732808 1 NC_010581.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 732808 6201092 Bind_0651 Beijerinckia indica subsp. indica ATCC 9039 YjgP/YjgQ family permease YP_001831790.1 731720 D 395963 CDS YP_001831791.1 182677645 6199408 732808..735486 1 NC_010581.1 PFAM: Organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein; organic solvent tolerance protein 735486 6199408 Bind_0652 Beijerinckia indica subsp. indica ATCC 9039 organic solvent tolerance protein YP_001831791.1 732808 D 395963 CDS YP_001831792.1 182677646 6200793 735658..736578 1 NC_010581.1 KEGG: rpa:RPA3064 hypothetical protein; hypothetical protein 736578 6200793 Bind_0653 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831792.1 735658 D 395963 CDS YP_001831793.1 182677647 6200092 736755..737648 1 NC_010581.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: xau:Xaut_2833 dimethyladenosine transferase; dimethyladenosine transferase 737648 6200092 Bind_0654 Beijerinckia indica subsp. indica ATCC 9039 dimethyladenosine transferase YP_001831793.1 736755 D 395963 CDS YP_001831794.1 182677648 6199915 737765..738868 1 NC_010581.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0340 NADPH dehydrogenase; NADH:flavin oxidoreductase 738868 6199915 Bind_0655 Beijerinckia indica subsp. indica ATCC 9039 NADH:flavin oxidoreductase YP_001831794.1 737765 D 395963 CDS YP_001831795.1 182677649 6200250 738947..739495 1 NC_010581.1 PFAM: membrane protein of uknown function UCP014873; KEGG: mex:Mext_1191 membrane protein of uknown function UCP014873; hypothetical protein 739495 6200250 Bind_0656 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831795.1 738947 D 395963 CDS YP_001831796.1 182677650 6199921 739559..740269 1 NC_010581.1 PFAM: MgtC/SapB transporter; KEGG: nha:Nham_0456 MgtC/SapB transporter; MgtC/SapB transporter 740269 6199921 Bind_0657 Beijerinckia indica subsp. indica ATCC 9039 MgtC/SapB transporter YP_001831796.1 739559 D 395963 CDS YP_001831797.1 182677651 6198663 complement(740293..741768) 1 NC_010581.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 741768 6198663 Bind_0658 Beijerinckia indica subsp. indica ATCC 9039 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_001831797.1 740293 R 395963 CDS YP_001831798.1 182677652 6198670 742065..742577 1 NC_010581.1 KEGG: xau:Xaut_2732 putative exported protein of unknown function; hypothetical protein 742577 6198670 Bind_0659 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831798.1 742065 D 395963 CDS YP_001831799.1 182677653 6201241 742586..743302 1 NC_010581.1 PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2; ribonuclease T2 743302 6201241 Bind_0660 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease T2 YP_001831799.1 742586 D 395963 CDS YP_001831800.1 182677654 6200110 743306..744151 1 NC_010581.1 PFAM: protein of unknown function DUF519; KEGG: mlo:mlr7888 hypothetical protein; hypothetical protein 744151 6200110 Bind_0661 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831800.1 743306 D 395963 CDS YP_001831801.1 182677655 6198809 744514..744726 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rpd:RPD_1283 cold-shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 744726 6198809 Bind_0662 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001831801.1 744514 D 395963 CDS YP_001831802.1 182677656 6198435 complement(744723..745640) 1 NC_010581.1 KEGG: mex:Mext_0017 hypothetical protein; hypothetical protein 745640 6198435 Bind_0663 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831802.1 744723 R 395963 CDS YP_001831803.1 182677657 6198430 complement(745698..746411) 1 NC_010581.1 hypothetical protein 746411 6198430 Bind_0664 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831803.1 745698 R 395963 CDS YP_001831804.1 182677658 6199265 746505..747593 1 NC_010581.1 KEGG: rru:Rru_A0360 methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor 747593 6199265 Bind_0665 Beijerinckia indica subsp. indica ATCC 9039 aIF-2BI family translation initiation factor YP_001831804.1 746505 D 395963 CDS YP_001831805.1 182677659 6201606 complement(747616..748068) 1 NC_010581.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like); protein tyrosine phosphatase 748068 6201606 Bind_0666 Beijerinckia indica subsp. indica ATCC 9039 protein tyrosine phosphatase YP_001831805.1 747616 R 395963 CDS YP_001831806.1 182677660 6198523 complement(748174..748662) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein; hypothetical protein 748662 6198523 Bind_0667 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831806.1 748174 R 395963 CDS YP_001831807.1 182677661 6201470 complement(748646..749983) 1 NC_010581.1 PFAM: histidinol dehydrogenase; KEGG: rpb:RPB_4350 histidinol dehydrogenase; histidinol dehydrogenase 749983 6201470 Bind_0668 Beijerinckia indica subsp. indica ATCC 9039 histidinol dehydrogenase YP_001831807.1 748646 R 395963 CDS YP_001831808.1 182677662 6198969 750364..750846 1 NC_010581.1 KEGG: nwi:Nwi_2333 hypothetical protein; hypothetical protein 750846 6198969 Bind_0669 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831808.1 750364 D 395963 CDS YP_001831809.1 182677663 6199023 750981..751331 1 NC_010581.1 KEGG: mex:Mext_2673 hypothetical protein; hypothetical protein 751331 6199023 Bind_0670 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831809.1 750981 D 395963 CDS YP_001831810.1 182677664 6200267 complement(751322..752047) 1 NC_010581.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_6065 hypothetical protein; NUDIX hydrolase 752047 6200267 Bind_0671 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001831810.1 751322 R 395963 CDS YP_001831811.1 182677665 6199567 752208..754037 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_0473 ATPase; ABC transporter-like protein 754037 6199567 Bind_0672 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831811.1 752208 D 395963 CDS YP_001831812.1 182677666 6200943 complement(754080..754952) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpt:Bpet3984 transcriptional regulator, LysR-family; LysR family transcriptional regulator 754952 6200943 Bind_0673 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831812.1 754080 R 395963 CDS YP_001831813.1 182677667 6201314 755044..756012 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpt:Bpet3983 quinone oxidoreductase; alcohol dehydrogenase 756012 6201314 Bind_0674 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001831813.1 755044 D 395963 CDS YP_001831814.1 182677668 6201494 756190..757302 1 NC_010581.1 KEGG: xau:Xaut_3460 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 757302 6201494 Bind_0675 Beijerinckia indica subsp. indica ATCC 9039 nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein YP_001831814.1 756190 D 395963 CDS YP_001831815.1 182677669 6201625 757332..758171 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 758171 6201625 Bind_0676 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001831815.1 757332 D 395963 CDS YP_001831816.1 182677670 6201440 758179..758967 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_3458 ABC transporter related; ABC transporter-like protein 758967 6201440 Bind_0677 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831816.1 758179 D 395963 CDS YP_001831817.1 182677671 6201204 758945..759091 1 NC_010581.1 hypothetical protein 759091 6201204 Bind_0678 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831817.1 758945 D 395963 CDS YP_001831818.1 182677672 6201227 759149..759313 1 NC_010581.1 hypothetical protein 759313 6201227 Bind_0679 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831818.1 759149 D 395963 CDS YP_001831819.1 182677673 6201566 759807..761993 1 NC_010581.1 KEGG: bcs:BCAN_A1643 PAS domain S-box; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 761993 6201566 Bind_0680 Beijerinckia indica subsp. indica ATCC 9039 PAS/PAC sensor signal transduction histidine kinase YP_001831819.1 759807 D 395963 CDS YP_001831820.1 182677674 6201803 762175..762417 1 NC_010581.1 hypothetical protein 762417 6201803 Bind_0681 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831820.1 762175 D 395963 CDS YP_001831821.1 182677675 6201172 762755..763444 1 NC_010581.1 hypothetical protein 763444 6201172 Bind_0682 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831821.1 762755 D 395963 CDS YP_001831822.1 182677676 6201740 763829..764323 1 NC_010581.1 PFAM: protein of unknown function UPF0040; KEGG: azc:AZC_4547 MraZ protein; hypothetical protein 764323 6201740 Bind_0683 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831822.1 763829 D 395963 CDS YP_001831823.1 182677677 6201760 764320..765387 1 NC_010581.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bja:bll6610 S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW 765387 mraW 6201760 mraW Beijerinckia indica subsp. indica ATCC 9039 S-adenosyl-methyltransferase MraW YP_001831823.1 764320 D 395963 CDS YP_001831824.1 182677678 6201276 765388..765780 1 NC_010581.1 KEGG: azc:AZC_4545 hypothetical protein; hypothetical protein 765780 6201276 Bind_0685 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831824.1 765388 D 395963 CDS YP_001831825.1 182677679 6201789 765790..767634 1 NC_010581.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 767634 6201789 Bind_0686 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan glycosyltransferase YP_001831825.1 765790 D 395963 CDS YP_001831826.1 182677680 6201736 767634..769094 1 NC_010581.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpc:RPC_2189 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 769094 6201736 Bind_0687 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylmuramyl tripeptide synthetase YP_001831826.1 767634 D 395963 CDS YP_001831827.1 182677681 6201752 769091..770551 1 NC_010581.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rpd:RPD_3398 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 770551 6201752 Bind_0688 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001831827.1 769091 D 395963 CDS YP_001831828.1 182677682 6201774 770690..771772 1 NC_010581.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 771772 mraY 6201774 mraY Beijerinckia indica subsp. indica ATCC 9039 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001831828.1 770690 D 395963 CDS YP_001831829.1 182677683 6201808 771775..773163 1 NC_010581.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 773163 murD 6201808 murD Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001831829.1 771775 D 395963 CDS YP_001831830.1 182677684 6201830 773220..774362 1 NC_010581.1 PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein; cell cycle protein 774362 6201830 Bind_0691 Beijerinckia indica subsp. indica ATCC 9039 cell cycle protein YP_001831830.1 773220 D 395963 CDS YP_001831831.1 182677685 6201861 774359..775486 1 NC_010581.1 KEGG: azc:AZC_4555 N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 775486 6201861 Bind_0692 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_001831831.1 774359 D 395963 CDS YP_001831832.1 182677686 6199725 775483..776913 1 NC_010581.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 776913 murC 6199725 murC Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylmuramate--L-alanine ligase YP_001831832.1 775483 D 395963 CDS YP_001831833.1 182677687 6198673 776915..777847 1 NC_010581.1 KEGG: xau:Xaut_0324 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 777847 6198673 Bind_0694 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001831833.1 776915 D 395963 CDS YP_001831834.1 182677688 6198336 777866..778789 1 NC_010581.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 778789 ddl 6198336 ddl Beijerinckia indica subsp. indica ATCC 9039 D-alanine--D-alanine ligase YP_001831834.1 777866 D 395963 CDS YP_001831835.1 182677689 6198384 778756..779739 1 NC_010581.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain protein FtsQ-type; polypeptide-transport-associated domain-containing protein 779739 6198384 Bind_0696 Beijerinckia indica subsp. indica ATCC 9039 polypeptide-transport-associated domain-containing protein YP_001831835.1 778756 D 395963 CDS YP_001831836.1 182677690 6198390 779746..781062 1 NC_010581.1 PFAM: cell division protein FtsA; KEGG: mex:Mext_2948 cell division protein FtsA; cell division protein FtsA 781062 6198390 Bind_0697 Beijerinckia indica subsp. indica ATCC 9039 cell division protein FtsA YP_001831836.1 779746 D 395963 CDS YP_001831837.1 182677691 6198394 781258..783090 1 NC_010581.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: xau:Xaut_0328 cell division protein FtsZ; cell division protein FtsZ 783090 6198394 Bind_0698 Beijerinckia indica subsp. indica ATCC 9039 cell division protein FtsZ YP_001831837.1 781258 D 395963 CDS YP_001831838.1 182677692 6199369 783553..784728 1 NC_010581.1 KEGG: mex:Mext_2951 putative lipoprotein; DNA uptake lipoprotein-like protein 784728 6199369 Bind_0699 Beijerinckia indica subsp. indica ATCC 9039 DNA uptake lipoprotein-like protein YP_001831838.1 783553 D 395963 CDS YP_001831839.1 182677693 6201431 784849..786513 1 NC_010581.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bja:bll6593 DNA repair protein; DNA repair protein RecN 786513 6201431 Bind_0700 Beijerinckia indica subsp. indica ATCC 9039 DNA repair protein RecN YP_001831839.1 784849 D 395963 CDS YP_001831840.1 182677694 6201673 786907..787332 1 NC_010581.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2942 hypothetical protein; cupin 787332 6201673 Bind_0701 Beijerinckia indica subsp. indica ATCC 9039 cupin YP_001831840.1 786907 D 395963 CDS YP_001831841.1 182677695 6201555 787405..788298 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: pla:Plav_0555 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 788298 6201555 Bind_0702 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001831841.1 787405 D 395963 CDS YP_001831842.1 182677696 6200751 788885..789226 1 NC_010581.1 hypothetical protein 789226 6200751 Bind_0703 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831842.1 788885 D 395963 CDS YP_001831843.1 182677697 6200951 789387..789614 1 NC_010581.1 hypothetical protein 789614 6200951 Bind_0704 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831843.1 789387 D 395963 CDS YP_001831844.1 182677698 6200661 join(790713..791039,791039..791476) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 791476 6200661 Bind_0705 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001831844.1 790713 D 395963 CDS YP_001831845.1 182677699 6200171 791563..793662 1 NC_010581.1 KEGG: xau:Xaut_1762 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase; NAD-dependent DNA ligase 793662 6200171 Bind_0706 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent DNA ligase YP_001831845.1 791563 D 395963 CDS YP_001831846.1 182677700 6201056 794146..797718 1 NC_010581.1 KEGG: rpa:RPA3316 possible chemotaxis CheB/CheR fusion protein; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; MCP methyltransferase/methylesterase 797718 6201056 Bind_0707 Beijerinckia indica subsp. indica ATCC 9039 MCP methyltransferase/methylesterase YP_001831846.1 794146 D 395963 CDS YP_001831847.1 182677701 6198638 797715..798086 1 NC_010581.1 SMART: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver; response regulator receiver protein 798086 6198638 Bind_0708 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001831847.1 797715 D 395963 CDS YP_001831848.1 182677702 6199297 complement(798091..798705) 1 NC_010581.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpa:RPA0206 putative cytochrome c biogenesis protein, thiol:disulfide interchange protein; periplasmic protein thiol--disulfide oxidoreductase DsbE 798705 6199297 Bind_0709 Beijerinckia indica subsp. indica ATCC 9039 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001831848.1 798091 R 395963 CDS YP_001831849.1 182677703 6199225 complement(798702..798872) 1 NC_010581.1 hypothetical protein 798872 6199225 Bind_0710 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831849.1 798702 R 395963 CDS YP_001831850.1 182677704 6198569 complement(798872..799627) 1 NC_010581.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rpe:RPE_0313 heme exporter protein CcmC; heme exporter protein CcmC 799627 6198569 Bind_0711 Beijerinckia indica subsp. indica ATCC 9039 heme exporter protein CcmC YP_001831850.1 798872 R 395963 CDS YP_001831851.1 182677705 6200697 complement(799839..800714) 1 NC_010581.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpa:RPA1068 glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ 800714 6200697 Bind_0712 Beijerinckia indica subsp. indica ATCC 9039 folate-binding protein YgfZ YP_001831851.1 799839 R 395963 CDS YP_001831852.1 182677706 6199953 800960..802282 1 NC_010581.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 802282 6199953 Bind_0713 Beijerinckia indica subsp. indica ATCC 9039 dihydroorotase YP_001831852.1 800960 D 395963 CDS YP_001831853.1 182677707 6201860 802738..803037 1 NC_010581.1 KEGG: bra:BRADO4333 hypothetical protein; hypothetical protein 803037 6201860 Bind_0714 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831853.1 802738 D 395963 CDS YP_001831854.1 182677708 6199211 complement(803185..803829) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein; hypothetical protein 803829 6199211 Bind_0715 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831854.1 803185 R 395963 CDS YP_001831855.1 182677709 6201835 complement(803846..804436) 1 NC_010581.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase; NUDIX hydrolase 804436 6201835 Bind_0716 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001831855.1 803846 R 395963 CDS YP_001831856.1 182677710 6200335 complement(804433..805314) 1 NC_010581.1 KEGG: azc:AZC_0487 hypothetical protein; hypothetical protein 805314 6200335 Bind_0717 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831856.1 804433 R 395963 CDS YP_001831857.1 182677711 6199954 805456..806073 1 NC_010581.1 PFAM: protein of unknown function DUF179; KEGG: rpe:RPE_0714 protein of unknown function DUF179; hypothetical protein 806073 6199954 Bind_0718 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831857.1 805456 D 395963 CDS YP_001831858.1 182677712 6200734 complement(806138..808990) 1 NC_010581.1 KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF sensor-containing diguanylate cyclase/phosphodiesterase 808990 6200734 Bind_0719 Beijerinckia indica subsp. indica ATCC 9039 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001831858.1 806138 R 395963 CDS YP_001831859.1 182677713 6199478 complement(809335..809943) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_0597 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 809943 6199478 Bind_0720 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001831859.1 809335 R 395963 CDS YP_001831860.1 182677714 6198549 complement(810188..811453) 1 NC_010581.1 PFAM: peptidase M16 domain protein; KEGG: azc:AZC_2240 mitochondrial processing peptidase-like protein; peptidase M16 domain-containing protein 811453 6198549 Bind_0721 Beijerinckia indica subsp. indica ATCC 9039 peptidase M16 domain-containing protein YP_001831860.1 810188 R 395963 CDS YP_001831861.1 182677715 6200074 complement(811546..812961) 1 NC_010581.1 KEGG: xau:Xaut_3524 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 812961 6200074 Bind_0722 Beijerinckia indica subsp. indica ATCC 9039 threonine synthase YP_001831861.1 811546 R 395963 CDS YP_001831862.1 182677716 6201833 complement(813181..813924) 1 NC_010581.1 PFAM: Surfeit locus 1 family protein; KEGG: azc:AZC_2953 putative surfeit locus protein; surfeit locus 1 family protein 813924 6201833 Bind_0723 Beijerinckia indica subsp. indica ATCC 9039 surfeit locus 1 family protein YP_001831862.1 813181 R 395963 CDS YP_001831863.1 182677717 6199791 complement(813945..814328) 1 NC_010581.1 PFAM: protein of unknown function DUF983; KEGG: rle:RL1028 putative transmembrane protein; hypothetical protein 814328 6199791 Bind_0724 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831863.1 813945 R 395963 CDS YP_001831864.1 182677718 6201798 complement(814423..815286) 1 NC_010581.1 PFAM: cytochrome c oxidase subunit III; KEGG: rpd:RPD_0819 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 815286 6201798 Bind_0725 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c oxidase subunit III YP_001831864.1 814423 R 395963 CDS YP_001831865.1 182677719 6198672 complement(815660..816286) 1 NC_010581.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bra:BRADO6703 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 816286 6198672 Bind_0726 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c oxidase assembly protein CtaG/Cox11 YP_001831865.1 815660 R 395963 CDS YP_001831866.1 182677720 6198470 complement(816288..816455) 1 NC_010581.1 KEGG: xau:Xaut_4645 conserved protein CoxF; protein CoxF 816455 6198470 Bind_0727 Beijerinckia indica subsp. indica ATCC 9039 protein CoxF YP_001831866.1 816288 R 395963 CDS YP_001831867.1 182677721 6198507 complement(816474..817439) 1 NC_010581.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 817439 6198507 Bind_0728 Beijerinckia indica subsp. indica ATCC 9039 protoheme IX farnesyltransferase YP_001831867.1 816474 R 395963 CDS YP_001831868.1 182677722 6201832 complement(817699..819366) 1 NC_010581.1 KEGG: oan:Oant_0582 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 819366 6201832 Bind_0729 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c oxidase subunit I YP_001831868.1 817699 R 395963 CDS YP_001831869.1 182677723 6199085 complement(819527..820414) 1 NC_010581.1 KEGG: azc:AZC_2960 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II 820414 6199085 Bind_0730 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c oxidase subunit II YP_001831869.1 819527 R 395963 CDS YP_001831870.1 182677724 6199413 820948..821589 1 NC_010581.1 PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein; invasion associated locus B family protein 821589 6199413 Bind_0731 Beijerinckia indica subsp. indica ATCC 9039 invasion associated locus B family protein YP_001831870.1 820948 D 395963 CDS YP_001831871.1 182677725 6198951 821771..822469 1 NC_010581.1 KEGG: azc:AZC_4244 hypothetical protein; hypothetical protein 822469 6198951 Bind_0732 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831871.1 821771 D 395963 CDS YP_001831872.1 182677726 6199217 822915..824069 1 NC_010581.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: azc:AZC_4245 glycine cleavage system T protein; glycine cleavage system T protein 824069 6199217 Bind_0733 Beijerinckia indica subsp. indica ATCC 9039 glycine cleavage system T protein YP_001831872.1 822915 D 395963 CDS YP_001831873.1 182677727 6198582 824069..824443 1 NC_010581.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 824443 6198582 Bind_0734 Beijerinckia indica subsp. indica ATCC 9039 glycine cleavage system protein H YP_001831873.1 824069 D 395963 CDS YP_001831874.1 182677728 6199453 824480..825823 1 NC_010581.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 825823 6199453 Bind_0735 Beijerinckia indica subsp. indica ATCC 9039 glycine dehydrogenase subunit 1 YP_001831874.1 824480 D 395963 CDS YP_001831875.1 182677729 6198826 825868..827424 1 NC_010581.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 827424 6198826 Bind_0736 Beijerinckia indica subsp. indica ATCC 9039 glycine dehydrogenase subunit 2 YP_001831875.1 825868 D 395963 CDS YP_001831876.1 182677730 6201490 complement(827470..828834) 1 NC_010581.1 KEGG: psa:PST_1093 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 828834 6201490 Bind_0737 Beijerinckia indica subsp. indica ATCC 9039 L-sorbosone dehydrogenase YP_001831876.1 827470 R 395963 CDS YP_001831877.1 182677731 6200689 complement(828934..829098) 1 NC_010581.1 KEGG: bja:bsr7045 hypothetical protein; hypothetical protein 829098 6200689 Bind_0738 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831877.1 828934 R 395963 CDS YP_001831878.1 182677732 6198172 complement(829339..829890) 1 NC_010581.1 KEGG: azc:AZC_0893 hypothetical protein; hypothetical protein 829890 6198172 Bind_0739 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831878.1 829339 R 395963 CDS YP_001831879.1 182677733 6201434 complement(830146..830631) 1 NC_010581.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: xau:Xaut_1976 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' 830631 6201434 Bind_0740 Beijerinckia indica subsp. indica ATCC 9039 H+transporting two-sector ATPase subunit B/B' YP_001831879.1 830146 R 395963 CDS YP_001831880.1 182677734 6201842 complement(830713..831276) 1 NC_010581.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit; H+transporting two-sector ATPase subunit B/B' 831276 6201842 Bind_0741 Beijerinckia indica subsp. indica ATCC 9039 H+transporting two-sector ATPase subunit B/B' YP_001831880.1 830713 R 395963 CDS YP_001831881.1 182677735 6198593 complement(831399..831629) 1 NC_010581.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: xau:Xaut_1978 H+transporting two-sector ATPase C subunit; H+transporting two-sector ATPase subunit C 831629 6198593 Bind_0742 Beijerinckia indica subsp. indica ATCC 9039 H+transporting two-sector ATPase subunit C YP_001831881.1 831399 R 395963 CDS YP_001831882.1 182677736 6201107 complement(831686..832447) 1 NC_010581.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 832447 6201107 Bind_0743 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit A YP_001831882.1 831686 R 395963 CDS YP_001831883.1 182677737 6200244 complement(832637..833008) 1 NC_010581.1 KEGG: mag:amb3992 ATP synthase protein I; hypothetical protein 833008 6200244 Bind_0744 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831883.1 832637 R 395963 CDS YP_001831884.1 182677738 6198556 complement(833212..836664) 1 NC_010581.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: xau:Xaut_1981 chromosome segregation protein SMC; chromosome segregation protein SMC 836664 6198556 Bind_0745 Beijerinckia indica subsp. indica ATCC 9039 chromosome segregation protein SMC YP_001831884.1 833212 R 395963 CDS YP_001831885.1 182677739 6199428 complement(836760..837437) 1 NC_010581.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3177 DsbA oxidoreductase; DSBA oxidoreductase 837437 6199428 Bind_0746 Beijerinckia indica subsp. indica ATCC 9039 DSBA oxidoreductase YP_001831885.1 836760 R 395963 CDS YP_001831886.1 182677740 6201447 complement(837939..838454) 1 NC_010581.1 PFAM: protein of unknown function DUF1159; KEGG: azc:AZC_0457 hypothetical protein; hypothetical protein 838454 6201447 Bind_0747 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831886.1 837939 R 395963 CDS YP_001831887.1 182677741 6199695 838732..839883 1 NC_010581.1 KEGG: azc:AZC_0456 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase 839883 6199695 Bind_0748 Beijerinckia indica subsp. indica ATCC 9039 A/G-specific adenine glycosylase YP_001831887.1 838732 D 395963 CDS YP_001831888.1 182677742 6198865 839844..840113 1 NC_010581.1 hypothetical protein 840113 6198865 Bind_0749 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831888.1 839844 D 395963 CDS YP_001831889.1 182677743 6199926 complement(840376..841563) 1 NC_010581.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 841563 6199926 Bind_0750 Beijerinckia indica subsp. indica ATCC 9039 DNA methylase N-4/N-6 domain-containing protein YP_001831889.1 840376 R 395963 CDS YP_001831890.1 182677744 6200713 841927..843315 1 NC_010581.1 KEGG: azc:AZC_2332 DAHP synthetase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 843315 6200713 Bind_0751 Beijerinckia indica subsp. indica ATCC 9039 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001831890.1 841927 D 395963 CDS YP_001831891.1 182677745 6199229 843402..844190 1 NC_010581.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_6127 putative extradiol ring-cleavage dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 844190 6199229 Bind_0752 Beijerinckia indica subsp. indica ATCC 9039 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001831891.1 843402 D 395963 CDS YP_001831892.1 182677746 6198562 844546..846219 1 NC_010581.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 846219 6198562 Bind_0753 Beijerinckia indica subsp. indica ATCC 9039 NAD synthetase YP_001831892.1 844546 D 395963 CDS YP_001831893.1 182677747 6200631 complement(846360..847124) 1 NC_010581.1 KEGG: nar:Saro_3091 hypothetical protein; hypothetical protein 847124 6200631 Bind_0754 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831893.1 846360 R 395963 CDS YP_001831894.1 182677748 6199628 complement(847231..849219) 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein; hypothetical protein 849219 6199628 Bind_0755 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831894.1 847231 R 395963 CDS YP_001831895.1 182677749 6198453 complement(849301..850107) 1 NC_010581.1 KEGG: gdi:GDI2237 hypothetical protein; hypothetical protein 850107 6198453 Bind_0756 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831895.1 849301 R 395963 CDS YP_001831896.1 182677750 6200264 850406..851038 1 NC_010581.1 KEGG: rpe:RPE_0755 DedA family; DedA family protein 851038 6200264 Bind_0757 Beijerinckia indica subsp. indica ATCC 9039 DedA family protein YP_001831896.1 850406 D 395963 CDS YP_001831897.1 182677751 6198439 851038..851541 1 NC_010581.1 KEGG: bja:blr1340 hypothetical protein; hypothetical protein 851541 6198439 Bind_0758 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831897.1 851038 D 395963 CDS YP_001831898.1 182677752 6198813 complement(851543..852718) 1 NC_010581.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mex:Mext_1640 radical SAM enzyme, Cfr family; radical SAM protein 852718 6198813 Bind_0759 Beijerinckia indica subsp. indica ATCC 9039 radical SAM protein YP_001831898.1 851543 R 395963 CDS YP_001831899.1 182677753 6198498 853023..853799 1 NC_010581.1 PFAM: protein of unknown function DUF541; KEGG: rpc:RPC_0217 protein of unknown function DUF541; hypothetical protein 853799 6198498 Bind_0760 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831899.1 853023 D 395963 CDS YP_001831900.1 182677754 6199069 complement(854051..854464) 1 NC_010581.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: xoo:XOO0606 XorII very-short-patch-repair endonuclease; DNA mismatch endonuclease Vsr 854464 6199069 Bind_0761 Beijerinckia indica subsp. indica ATCC 9039 DNA mismatch endonuclease Vsr YP_001831900.1 854051 R 395963 CDS YP_001831901.1 182677755 6200148 complement(854467..854628) 1 NC_010581.1 hypothetical protein 854628 6200148 Bind_0762 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831901.1 854467 R 395963 CDS YP_001831902.1 182677756 6200003 complement(854804..855757) 1 NC_010581.1 KEGG: ter:Tery_0137 hypothetical protein; hypothetical protein 855757 6200003 Bind_0763 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831902.1 854804 R 395963 CDS YP_001831903.1 182677757 6199351 complement(855765..856880) 1 NC_010581.1 KEGG: sus:Acid_1680 hypothetical protein; hypothetical protein 856880 6199351 Bind_0764 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831903.1 855765 R 395963 CDS YP_001831904.1 182677758 6199216 complement(856873..858726) 1 NC_010581.1 PFAM: protein of unknown function DUF262; KEGG: pth:PTH_0153 hypothetical protein; hypothetical protein 858726 6199216 Bind_0765 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831904.1 856873 R 395963 CDS YP_001831905.1 182677759 6199266 complement(858726..860192) 1 NC_010581.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: esa:ESA_pESA2p06562 hypothetical protein; DNA-cytosine methyltransferase 860192 6199266 Bind_0766 Beijerinckia indica subsp. indica ATCC 9039 DNA-cytosine methyltransferase YP_001831905.1 858726 R 395963 CDS YP_001831906.1 182677760 6198434 complement(860732..862225) 1 NC_010581.1 KEGG: rru:Rru_A1927 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 862225 6198434 Bind_0767 Beijerinckia indica subsp. indica ATCC 9039 succinate CoA transferase YP_001831906.1 860732 R 395963 CDS YP_001831907.1 182677761 6199620 862471..863097 1 NC_010581.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: reu:Reut_C5986 NAD(P)H dehydrogenase (quinone):flavodoxin/nitric oxide synthase; flavoprotein WrbA 863097 6199620 Bind_0768 Beijerinckia indica subsp. indica ATCC 9039 flavoprotein WrbA YP_001831907.1 862471 D 395963 CDS YP_001831908.1 182677762 6198963 complement(863122..864099) 1 NC_010581.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 864099 thyX 6198963 thyX Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent thymidylate synthase YP_001831908.1 863122 R 395963 CDS YP_001831909.1 182677763 6200334 complement(864170..864958) 1 NC_010581.1 PFAM: Abortive infection protein; KEGG: pcl:Pcal_0124 abortive infection protein; abortive infection protein 864958 6200334 Bind_0770 Beijerinckia indica subsp. indica ATCC 9039 abortive infection protein YP_001831909.1 864170 R 395963 CDS YP_001831910.1 182677764 6198450 865429..865983 1 NC_010581.1 PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 protein of unknown function DUF1321; hypothetical protein 865983 6198450 Bind_0771 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831910.1 865429 D 395963 CDS YP_001831911.1 182677765 6198635 866007..866216 1 NC_010581.1 KEGG: azc:AZC_2567 hypothetical protein; hypothetical protein 866216 6198635 Bind_0772 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831911.1 866007 D 395963 CDS YP_001831912.1 182677766 6199438 866223..866486 1 NC_010581.1 KEGG: atc:AGR_C_3716 hypothetical protein; hypothetical protein 866486 6199438 Bind_0773 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831912.1 866223 D 395963 CDS YP_001831913.1 182677767 6200111 866745..867773 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2473 alcohol dehydrogenase; alcohol dehydrogenase 867773 6200111 Bind_0774 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001831913.1 866745 D 395963 CDS YP_001831914.1 182677768 6200041 867817..869208 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: ppu:PP_2488 succinic-semialdehyde dehydrogenase, putative; aldehyde dehydrogenase 869208 6200041 Bind_0775 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001831914.1 867817 D 395963 CDS YP_001831915.1 182677769 6200107 complement(869268..870170) 1 NC_010581.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: nwi:Nwi_2367 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 870170 6200107 Bind_0776 Beijerinckia indica subsp. indica ATCC 9039 ribosomal L11 methyltransferase YP_001831915.1 869268 R 395963 CDS YP_001831916.1 182677770 6200688 complement(870379..871182) 1 NC_010581.1 PFAM: OmpW family protein; KEGG: xau:Xaut_1968 OmpW family protein; OmpW family protein 871182 6200688 Bind_0777 Beijerinckia indica subsp. indica ATCC 9039 OmpW family protein YP_001831916.1 870379 R 395963 CDS YP_001831917.1 182677771 6200287 872009..872722 1 NC_010581.1 KEGG: mex:Mext_0401 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 872722 6200287 Bind_0778 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease PH YP_001831917.1 872009 D 395963 CDS YP_001831918.1 182677772 6201136 872727..873374 1 NC_010581.1 PFAM: Ham1 family protein; KEGG: mex:Mext_0402 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Ham1 family protein 873374 6201136 Bind_0779 Beijerinckia indica subsp. indica ATCC 9039 Ham1 family protein YP_001831918.1 872727 D 395963 CDS YP_001831919.1 182677773 6200653 873590..873904 1 NC_010581.1 KEGG: rpd:RPD_2935 hypothetical protein; hypothetical protein 873904 6200653 Bind_0780 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831919.1 873590 D 395963 CDS YP_001831920.1 182677774 6201825 complement(874017..874331) 1 NC_010581.1 hypothetical protein 874331 6201825 Bind_0781 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831920.1 874017 R 395963 CDS YP_001831921.1 182677775 6199433 874511..875371 1 NC_010581.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: pmt:PMT1382 hypothetical protein; phytanoyl-CoA dioxygenase 875371 6199433 Bind_0782 Beijerinckia indica subsp. indica ATCC 9039 phytanoyl-CoA dioxygenase YP_001831921.1 874511 D 395963 CDS YP_001831922.1 182677776 6201858 complement(875431..875748) 1 NC_010581.1 hypothetical protein 875748 6201858 Bind_0783 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831922.1 875431 R 395963 CDS YP_001831923.1 182677777 6199067 875958..876842 1 NC_010581.1 KEGG: bra:BRADO1008 hypothetical protein; hypothetical protein 876842 6199067 Bind_0784 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831923.1 875958 D 395963 CDS YP_001831924.1 182677778 6199381 876857..878257 1 NC_010581.1 KEGG: bja:blr4318 hypothetical protein; hypothetical protein 878257 6199381 Bind_0785 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831924.1 876857 D 395963 CDS YP_001831925.1 182677779 6200633 878706..879080 1 NC_010581.1 hypothetical protein 879080 6200633 Bind_0786 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831925.1 878706 D 395963 CDS YP_001831926.1 182677780 6201820 complement(879153..881555) 1 NC_010581.1 PFAM: UvrD/REP helicase; KEGG: rpa:RPA3506 DNA helicase II; UvrD/REP helicase 881555 6201820 Bind_0787 Beijerinckia indica subsp. indica ATCC 9039 UvrD/REP helicase YP_001831926.1 879153 R 395963 CDS YP_001831927.1 182677781 6200552 881712..882659 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: xau:Xaut_0990 aldo/keto reductase; aldo/keto reductase 882659 6200552 Bind_0788 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001831927.1 881712 D 395963 CDS YP_001831928.1 182677782 6198857 complement(882888..883232) 1 NC_010581.1 hypothetical protein 883232 6198857 Bind_0789 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831928.1 882888 R 395963 CDS YP_001831929.1 182677783 6201829 complement(883687..883947) 1 NC_010581.1 hypothetical protein 883947 6201829 Bind_0790 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831929.1 883687 R 395963 CDS YP_001831930.1 182677784 6201758 complement(884038..884982) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_1730 transcriptional regulator, LysR family; LysR family transcriptional regulator 884982 6201758 Bind_0791 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001831930.1 884038 R 395963 CDS YP_001831931.1 182677785 6201151 885075..886130 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gdi:GDI2842 putative NAD dependent epimerase/dehydratase protein; NAD-dependent epimerase/dehydratase 886130 6201151 Bind_0792 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001831931.1 885075 D 395963 CDS YP_001831932.1 182677786 6200607 complement(886158..886367) 1 NC_010581.1 hypothetical protein 886367 6200607 Bind_0793 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831932.1 886158 R 395963 CDS YP_001831933.1 182677787 6200323 complement(886417..886824) 1 NC_010581.1 hypothetical protein 886824 6200323 Bind_0794 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831933.1 886417 R 395963 CDS YP_001831934.1 182677788 6201101 complement(887226..888530) 1 NC_010581.1 KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 888530 6201101 Bind_0795 Beijerinckia indica subsp. indica ATCC 9039 nucleotide sugar dehydrogenase YP_001831934.1 887226 R 395963 CDS YP_001831935.1 182677789 6198411 889086..890120 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: maq:Maqu_1687 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 890120 6198411 Bind_0796 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001831935.1 889086 D 395963 CDS YP_001831936.1 182677790 6199090 890259..891239 1 NC_010581.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_4304 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 891239 6199090 Bind_0797 Beijerinckia indica subsp. indica ATCC 9039 PDZ/DHR/GLGF domain-containing protein YP_001831936.1 890259 D 395963 CDS YP_001831937.1 182677791 6198542 891363..891734 1 NC_010581.1 hypothetical protein 891734 6198542 Bind_0798 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831937.1 891363 D 395963 CDS YP_001831938.1 182677792 6199964 891749..892588 1 NC_010581.1 PFAM: Gp37Gp68 family protein; KEGG: nfa:nfa39500 hypothetical protein; Gp37Gp68 family protein 892588 6199964 Bind_0799 Beijerinckia indica subsp. indica ATCC 9039 Gp37Gp68 family protein YP_001831938.1 891749 D 395963 CDS YP_001831939.1 182677793 6200875 892682..893026 1 NC_010581.1 KEGG: rpe:RPE_2366 hypothetical protein; hypothetical protein 893026 6200875 Bind_0800 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831939.1 892682 D 395963 CDS YP_001831940.1 182677794 6200991 893051..893917 1 NC_010581.1 KEGG: gur:Gura_3491 GTPase or GTP-binding protein-like protein; GTPase or GTP-binding protein-like protein 893917 6200991 Bind_0801 Beijerinckia indica subsp. indica ATCC 9039 GTPase or GTP-binding protein-like protein YP_001831940.1 893051 D 395963 CDS YP_001831941.1 182677795 6201392 complement(893905..894489) 1 NC_010581.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rpa:RPA0951 nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase 894489 6201392 Bind_0802 Beijerinckia indica subsp. indica ATCC 9039 nucleoside 2-deoxyribosyltransferase YP_001831941.1 893905 R 395963 CDS YP_001831942.1 182677796 6200792 894569..895438 1 NC_010581.1 PFAM: Aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase; aldose 1-epimerase 895438 6200792 Bind_0803 Beijerinckia indica subsp. indica ATCC 9039 aldose 1-epimerase YP_001831942.1 894569 D 395963 CDS YP_001831943.1 182677797 6200990 895488..895766 1 NC_010581.1 KEGG: gdi:GDI3845 hypothetical protein; hypothetical protein 895766 6200990 Bind_0804 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831943.1 895488 D 395963 CDS YP_001831944.1 182677798 6200647 895903..896865 1 NC_010581.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mlo:mlr6508 methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase 896865 6200647 Bind_0805 Beijerinckia indica subsp. indica ATCC 9039 methenyltetrahydrofolate cyclohydrolase YP_001831944.1 895903 D 395963 CDS YP_001831945.1 182677799 6201605 896991..898514 1 NC_010581.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: azc:AZC_2186 putative ATPase; lipopolysaccharide biosynthesis protein 898514 6201605 Bind_0806 Beijerinckia indica subsp. indica ATCC 9039 lipopolysaccharide biosynthesis protein YP_001831945.1 896991 D 395963 CDS YP_001831946.1 182677800 6200642 complement(898628..898840) 1 NC_010581.1 KEGG: mex:Mext_1606 hypothetical protein; hypothetical protein 898840 6200642 Bind_0807 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831946.1 898628 R 395963 CDS YP_001831947.1 182677801 6201570 899011..900090 1 NC_010581.1 PFAM: cytochrome oxidase assembly; KEGG: bja:bll4968 cytochrome oxidase assembly factor; cytochrome oxidase assembly 900090 6201570 Bind_0808 Beijerinckia indica subsp. indica ATCC 9039 cytochrome oxidase assembly YP_001831947.1 899011 D 395963 CDS YP_001831948.1 182677802 6201489 900382..901437 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_7850 putative HlyD-family secretion protein; secretion protein HlyD family protein 901437 6201489 Bind_0809 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001831948.1 900382 D 395963 CDS YP_001831949.1 182677803 6201499 901394..904192 1 NC_010581.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: bbt:BBta_7849 putative ABC transporter (protein fusion consisting of two ATP-binding domains and permease); ABC transporter-like protein 904192 6201499 Bind_0810 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831949.1 901394 D 395963 CDS YP_001831950.1 182677804 6201821 904254..905381 1 NC_010581.1 PFAM: ABC-2 type transporter; KEGG: bbt:BBta_7848 putative ABC transporter (permease protein); ABC-2 type transporter 905381 6201821 Bind_0811 Beijerinckia indica subsp. indica ATCC 9039 ABC-2 type transporter YP_001831950.1 904254 D 395963 CDS YP_001831951.1 182677805 6201104 complement(905472..906755) 1 NC_010581.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 906755 6201104 Bind_0812 Beijerinckia indica subsp. indica ATCC 9039 O-acetylhomoserine aminocarboxypropyltransferase YP_001831951.1 905472 R 395963 CDS YP_001831952.1 182677806 6200580 complement(906788..907477) 1 NC_010581.1 TIGRFAM: dethiobiotin synthase; KEGG: gbe:GbCGDNIH1_0496 dethiobiotin synthetase; dethiobiotin synthase 907477 6200580 Bind_0813 Beijerinckia indica subsp. indica ATCC 9039 dethiobiotin synthase YP_001831952.1 906788 R 395963 CDS YP_001831953.1 182677807 6200974 complement(907706..908866) 1 NC_010581.1 KEGG: ccr:CC_1576 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; 8-amino-7-oxononanoate synthase 908866 6200974 Bind_0814 Beijerinckia indica subsp. indica ATCC 9039 8-amino-7-oxononanoate synthase YP_001831953.1 907706 R 395963 CDS YP_001831954.1 182677808 6200866 908995..910278 1 NC_010581.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: gdi:GDI1919 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 910278 6200866 Bind_0815 Beijerinckia indica subsp. indica ATCC 9039 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001831954.1 908995 D 395963 CDS YP_001831955.1 182677809 6198920 complement(910275..910487) 1 NC_010581.1 hypothetical protein 910487 6198920 Bind_0816 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831955.1 910275 R 395963 CDS YP_001831956.1 182677810 6198955 complement(910698..911756) 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: bcz:BCZK5150 probable membrane protein; acyltransferase 3 911756 6198955 Bind_0817 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001831956.1 910698 R 395963 CDS YP_001831957.1 182677811 6198949 complement(911789..912067) 1 NC_010581.1 hypothetical protein 912067 6198949 Bind_0818 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831957.1 911789 R 395963 CDS YP_001831958.1 182677812 6200465 complement(912153..914606) 1 NC_010581.1 KEGG: atc:AGR_C_19 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 914606 6200465 Bind_0819 Beijerinckia indica subsp. indica ATCC 9039 DNA gyrase subunit B YP_001831958.1 912153 R 395963 CDS YP_001831959.1 182677813 6199427 914875..915129 1 NC_010581.1 KEGG: bbt:BBta_2168 hypothetical protein; hypothetical protein 915129 6199427 Bind_0820 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831959.1 914875 D 395963 CDS YP_001831960.1 182677814 6199782 complement(915188..915613) 1 NC_010581.1 KEGG: xau:Xaut_0101 hypothetical protein; hypothetical protein 915613 6199782 Bind_0821 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831960.1 915188 R 395963 CDS YP_001831961.1 182677815 6200066 complement(915832..916317) 1 NC_010581.1 KEGG: bra:BRADO5428 hypothetical protein; hypothetical protein 916317 6200066 Bind_0822 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831961.1 915832 R 395963 CDS YP_001831962.1 182677816 6198882 complement(916565..919162) 1 NC_010581.1 KEGG: rpa:RPA4433 endopeptidase Clp: ATP-binding subunit B, ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 919162 6198882 Bind_0823 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent chaperone ClpB YP_001831962.1 916565 R 395963 CDS YP_001831963.1 182677817 6200657 complement(919528..920565) 1 NC_010581.1 KEGG: mex:Mext_0953 hypothetical protein; hypothetical protein 920565 6200657 Bind_0824 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831963.1 919528 R 395963 CDS YP_001831964.1 182677818 6201531 complement(921132..922052) 1 NC_010581.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: bbt:BBta_7605 putative protein methyltransferase HemK modifies release factors RF-1 and RF-2; protein-(glutamine-N5) methyltransferase 922052 6201531 Bind_0825 Beijerinckia indica subsp. indica ATCC 9039 protein-(glutamine-N5) methyltransferase YP_001831964.1 921132 R 395963 CDS YP_001831965.1 182677819 6201458 complement(922049..924022) 1 NC_010581.1 molecular chaperone; heat shock protein 90 924022 6201458 Bind_0826 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein 90 YP_001831965.1 922049 R 395963 CDS YP_001831966.1 182677820 6200333 924550..924957 1 NC_010581.1 KEGG: bja:bll0464 hypothetical protein; hypothetical protein 924957 6200333 Bind_0827 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831966.1 924550 D 395963 CDS YP_001831967.1 182677821 6201287 complement(925038..925808) 1 NC_010581.1 PFAM: protein of unknown function UPF0005; KEGG: azc:AZC_0959 hypothetical protein; hypothetical protein 925808 6201287 Bind_0828 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831967.1 925038 R 395963 CDS YP_001831968.1 182677822 6201840 complement(926071..928686) 1 NC_010581.1 PFAM: protein of unknown function DUF214; KEGG: bja:blr0461 probable ABC transporter permease protein; hypothetical protein 928686 6201840 Bind_0829 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831968.1 926071 R 395963 CDS YP_001831969.1 182677823 6200731 complement(928683..929396) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0285 ABC transporter related; ABC transporter-like protein 929396 6200731 Bind_0830 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001831969.1 928683 R 395963 CDS YP_001831970.1 182677824 6200925 929582..930328 1 NC_010581.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 lipolytic protein G-D-S-L family; GDSL family lipase 930328 6200925 Bind_0831 Beijerinckia indica subsp. indica ATCC 9039 GDSL family lipase YP_001831970.1 929582 D 395963 CDS YP_001831971.1 182677825 6200255 930407..930940 1 NC_010581.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: bra:BRADO0401 putative 2'-5' RNA ligase; 2'-5' RNA ligase 930940 6200255 Bind_0832 Beijerinckia indica subsp. indica ATCC 9039 2'-5' RNA ligase YP_001831971.1 930407 D 395963 CDS YP_001831972.1 182677826 6201388 complement(930977..932419) 1 NC_010581.1 PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450; cytochrome P450 932419 6201388 Bind_0833 Beijerinckia indica subsp. indica ATCC 9039 cytochrome P450 YP_001831972.1 930977 R 395963 CDS YP_001831973.1 182677827 6199073 933160..934617 1 NC_010581.1 hypothetical protein 934617 6199073 Bind_0834 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831973.1 933160 D 395963 CDS YP_001831974.1 182677828 6201822 934732..935550 1 NC_010581.1 PFAM: polysaccharide export protein; KEGG: har:HEAR0714 putative polysaccharide export protein; polysaccharide export protein 935550 6201822 Bind_0835 Beijerinckia indica subsp. indica ATCC 9039 polysaccharide export protein YP_001831974.1 934732 D 395963 CDS YP_001831975.1 182677829 6201834 936525..937697 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7078 putative glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 937697 6201834 Bind_0836 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831975.1 936525 D 395963 CDS YP_001831976.1 182677830 6200266 937793..940072 1 NC_010581.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase; lipopolysaccharide biosynthesis protein 940072 6200266 Bind_0837 Beijerinckia indica subsp. indica ATCC 9039 lipopolysaccharide biosynthesis protein YP_001831976.1 937793 D 395963 CDS YP_001831977.1 182677831 6199551 940080..941129 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A2618 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 941129 6199551 Bind_0838 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831977.1 940080 D 395963 CDS YP_001831978.1 182677832 6200587 941170..942246 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: hau:Haur_4807 phosphatidylinositol alpha-mannosyltransferase; group 1 glycosyl transferase 942246 6200587 Bind_0839 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831978.1 941170 D 395963 CDS YP_001831979.1 182677833 6198482 942236..943432 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: bmu:Bmul_4910 glycosyl transferase group 1; group 1 glycosyl transferase 943432 6198482 Bind_0840 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831979.1 942236 D 395963 CDS YP_001831980.1 182677834 6198440 943432..944583 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: amr:AM1_1894 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 944583 6198440 Bind_0841 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001831980.1 943432 D 395963 CDS YP_001831981.1 182677835 6201180 944591..946087 1 NC_010581.1 KEGG: ava:Ava_1124 hypothetical protein; hypothetical protein 946087 6201180 Bind_0842 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831981.1 944591 D 395963 CDS YP_001831982.1 182677836 6200701 946113..947348 1 NC_010581.1 KEGG: det:DET0108 endonuclease/exonuclease/phosphatase family protein; hypothetical protein 947348 6200701 Bind_0843 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831982.1 946113 D 395963 CDS YP_001831983.1 182677837 6198657 947491..948336 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: reh:H16_B0041 predicted glycosyltransferase; glycosyl transferase family protein 948336 6198657 Bind_0844 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001831983.1 947491 D 395963 CDS YP_001831984.1 182677838 6199094 949329..952688 1 NC_010581.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pst:PSPTO_2149 pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component; amino acid adenylation domain-containing protein 952688 6199094 Bind_0845 Beijerinckia indica subsp. indica ATCC 9039 amino acid adenylation domain-containing protein YP_001831984.1 949329 D 395963 CDS YP_001831985.1 182677839 6199027 952956..961088 1 NC_010581.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase ; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; amino acid adenylation domain-containing protein 961088 6199027 Bind_0846 Beijerinckia indica subsp. indica ATCC 9039 amino acid adenylation domain-containing protein YP_001831985.1 952956 D 395963 CDS YP_001831986.1 182677840 6199637 961085..963907 1 NC_010581.1 PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2581 condensation domain; condensation domain-containing protein 963907 6199637 Bind_0847 Beijerinckia indica subsp. indica ATCC 9039 condensation domain-containing protein YP_001831986.1 961085 D 395963 CDS YP_001831987.1 182677841 6198429 964125..965300 1 NC_010581.1 KEGG: bha:BH0727 hypothetical protein; hypothetical protein 965300 6198429 Bind_0848 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831987.1 964125 D 395963 CDS YP_001831988.1 182677842 6199694 complement(965210..965920) 1 NC_010581.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mes:Meso_2583 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 965920 6199694 Bind_0849 Beijerinckia indica subsp. indica ATCC 9039 4'-phosphopantetheinyl transferase YP_001831988.1 965210 R 395963 CDS YP_001831989.1 182677843 6201336 complement(966080..968737) 1 NC_010581.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: xau:Xaut_4749 aminopeptidase N; aminopeptidase N 968737 pepN 6201336 pepN Beijerinckia indica subsp. indica ATCC 9039 aminopeptidase N YP_001831989.1 966080 R 395963 CDS YP_001831990.1 182677844 6201562 968937..969494 1 NC_010581.1 KEGG: bja:bll4707 hypothetical protein; hypothetical protein 969494 6201562 Bind_0851 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831990.1 968937 D 395963 CDS YP_001831991.1 182677845 6201708 complement(969534..970862) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1501 AMP-dependent synthetase and ligase; major facilitator transporter 970862 6201708 Bind_0852 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001831991.1 969534 R 395963 CDS YP_001831992.1 182677846 6201147 complement(970876..972315) 1 NC_010581.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_2019 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 972315 6201147 Bind_0853 Beijerinckia indica subsp. indica ATCC 9039 cation diffusion facilitator family transporter YP_001831992.1 970876 R 395963 CDS YP_001831993.1 182677847 6201700 973045..973485 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hha:Hhal_0152 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 973485 6201700 Bind_0854 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001831993.1 973045 D 395963 CDS YP_001831994.1 182677848 6201547 973785..974795 1 NC_010581.1 PFAM: Polyprenyl synthetase; KEGG: xau:Xaut_1373 polyprenyl synthetase; polyprenyl synthetase 974795 6201547 Bind_0855 Beijerinckia indica subsp. indica ATCC 9039 polyprenyl synthetase YP_001831994.1 973785 D 395963 CDS YP_001831995.1 182677849 6198966 974950..976182 1 NC_010581.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB; cell wall hydrolase SleB 976182 6198966 Bind_0856 Beijerinckia indica subsp. indica ATCC 9039 cell wall hydrolase SleB YP_001831995.1 974950 D 395963 CDS YP_001831996.1 182677850 6198841 976521..978239 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_3111 tetratricopeptide TPR_2 repeat protein; hypothetical protein 978239 6198841 Bind_0857 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831996.1 976521 D 395963 CDS YP_001831997.1 182677851 6200466 978394..979338 1 NC_010581.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 979338 6200466 Bind_0858 Beijerinckia indica subsp. indica ATCC 9039 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001831997.1 978394 D 395963 CDS YP_001831998.1 182677852 6198950 979472..981622 1 NC_010581.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0746 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 981622 6198950 Bind_0859 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent siderophore receptor YP_001831998.1 979472 D 395963 CDS YP_001831999.1 182677853 6199625 981626..982513 1 NC_010581.1 KEGG: nwi:Nwi_0880 hypothetical protein; hypothetical protein 982513 6199625 Bind_0860 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001831999.1 981626 D 395963 CDS YP_001832000.1 182677854 6199932 complement(982526..983245) 1 NC_010581.1 KEGG: mes:Meso_1012 HpcH/HpaI aldolase; citrate lyase subunit beta-like protein 983245 6199932 Bind_0861 Beijerinckia indica subsp. indica ATCC 9039 citrate lyase subunit beta-like protein YP_001832000.1 982526 R 395963 CDS YP_001832001.1 182677855 6198674 complement(983299..983880) 1 NC_010581.1 PFAM: NUDIX hydrolase; KEGG: acr:Acry_0324 NUDIX hydrolase; NUDIX hydrolase 983880 6198674 Bind_0862 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001832001.1 983299 R 395963 CDS YP_001832002.1 182677856 6198306 complement(983884..984675) 1 NC_010581.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase; NAD(+) kinase 984675 6198306 Bind_0863 Beijerinckia indica subsp. indica ATCC 9039 NAD(+) kinase YP_001832002.1 983884 R 395963 CDS YP_001832003.1 182677857 6199624 complement(984751..985320) 1 NC_010581.1 KEGG: bur:Bcep18194_C6733 hypothetical protein; hypothetical protein 985320 6199624 Bind_0864 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832003.1 984751 R 395963 CDS YP_001832004.1 182677858 6199623 985645..986757 1 NC_010581.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ava:Ava_4847 glycoside hydrolase, family 3-like; glycoside hydrolase family 3 986757 6199623 Bind_0865 Beijerinckia indica subsp. indica ATCC 9039 glycoside hydrolase family 3 YP_001832004.1 985645 D 395963 CDS YP_001832005.1 182677859 6201411 complement(986778..987797) 1 NC_010581.1 PFAM: Bile acid:sodium symporter; KEGG: cak:Caul_0525 bile acid:sodium symporter; bile acid:sodium symporter 987797 6201411 Bind_0866 Beijerinckia indica subsp. indica ATCC 9039 bile acid:sodium symporter YP_001832005.1 986778 R 395963 CDS YP_001832006.1 182677860 6200627 complement(988310..988639) 1 NC_010581.1 hypothetical protein 988639 6200627 Bind_0867 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832006.1 988310 R 395963 CDS YP_001832007.1 182677861 6199426 complement(989004..989477) 1 NC_010581.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 989477 greA 6199426 greA Beijerinckia indica subsp. indica ATCC 9039 transcription elongation factor GreA YP_001832007.1 989004 R 395963 CDS YP_001832008.1 182677862 6200289 complement(989594..992917) 1 NC_010581.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: azc:AZC_1145 carbamoyl-phosphate synthase large subunit; carbamoyl-phosphate synthase large subunit 992917 6200289 Bind_0869 Beijerinckia indica subsp. indica ATCC 9039 carbamoyl-phosphate synthase large subunit YP_001832008.1 989594 R 395963 CDS YP_001832009.1 182677863 6199372 complement(993375..993962) 1 NC_010581.1 KEGG: mex:Mext_2468 hypothetical protein; hypothetical protein 993962 6199372 Bind_0870 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832009.1 993375 R 395963 CDS YP_001832010.1 182677864 6200048 complement(993976..994956) 1 NC_010581.1 KEGG: mex:Mext_4039 hypothetical protein; hypothetical protein 994956 6200048 Bind_0871 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832010.1 993976 R 395963 CDS YP_001832011.1 182677865 6198979 995441..996064 1 NC_010581.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpe:RPE_2325 transglutaminase family protein cysteine peptidase, BTLCP; transglutaminase 996064 6198979 Bind_0872 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase YP_001832011.1 995441 D 395963 CDS YP_001832012.1 182677866 6199277 996162..997157 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: pap:PSPA7_4242 probable oxidoreductase; aldo/keto reductase 997157 6199277 Bind_0873 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001832012.1 996162 D 395963 CDS YP_001832013.1 182677867 6201403 complement(997228..997755) 1 NC_010581.1 KEGG: mex:Mext_4257 hypothetical protein; hypothetical protein 997755 6201403 Bind_0874 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832013.1 997228 R 395963 CDS YP_001832014.1 182677868 6201773 complement(997952..999283) 1 NC_010581.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: gbe:GbCGDNIH1_0861 nucleoside permease NupC; Na+ dependent nucleoside transporter 999283 6201773 Bind_0875 Beijerinckia indica subsp. indica ATCC 9039 Na+ dependent nucleoside transporter YP_001832014.1 997952 R 395963 CDS YP_001832015.1 182677869 6200635 complement(999353..1000120) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azc:AZC_4173 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1000120 6200635 Bind_0876 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832015.1 999353 R 395963 CDS YP_001832016.1 182677870 6201423 complement(1000180..1000863) 1 NC_010581.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase; phosphoglycolate phosphatase 1000863 6201423 Bind_0877 Beijerinckia indica subsp. indica ATCC 9039 phosphoglycolate phosphatase YP_001832016.1 1000180 R 395963 CDS YP_001832017.1 182677871 6199489 1001156..1001569 1 NC_010581.1 KEGG: mex:Mext_2297 hypothetical protein; hypothetical protein 1001569 6199489 Bind_0878 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832017.1 1001156 D 395963 CDS YP_001832018.1 182677872 6198257 1001735..1002445 1 NC_010581.1 KEGG: rpe:RPE_1987 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 1002445 6198257 Bind_0879 Beijerinckia indica subsp. indica ATCC 9039 ribose 5-phosphate isomerase YP_001832018.1 1001735 D 395963 CDS YP_001832019.1 182677873 6201267 1002452..1003027 1 NC_010581.1 KEGG: azc:AZC_2357 hypothetical protein; hypothetical protein 1003027 6201267 Bind_0880 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832019.1 1002452 D 395963 CDS YP_001832020.1 182677874 6198894 1003260..1004672 1 NC_010581.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rpb:RPB_3384 glutathione reductase; glutathione-disulfide reductase 1004672 6198894 Bind_0881 Beijerinckia indica subsp. indica ATCC 9039 glutathione-disulfide reductase YP_001832020.1 1003260 D 395963 CDS YP_001832021.1 182677875 6200924 complement(1004825..1005079) 1 NC_010581.1 hypothetical protein 1005079 6200924 Bind_0882 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832021.1 1004825 R 395963 CDS YP_001832022.1 182677876 6200695 1005289..1005861 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR; MarR family transcriptional regulator 1005861 6200695 Bind_0883 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001832022.1 1005289 D 395963 CDS YP_001832023.1 182677877 6199755 1006360..1007730 1 NC_010581.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1377 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 1007730 6199755 Bind_0884 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan binding domain-containing protein YP_001832023.1 1006360 D 395963 CDS YP_001832024.1 182677878 6201637 complement(1007887..1009143) 1 NC_010581.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: xau:Xaut_4413 protein of unknown function DUF900 hydrolase family protein; hypothetical protein 1009143 6201637 Bind_0885 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832024.1 1007887 R 395963 CDS YP_001832025.1 182677879 6200625 complement(1009312..1010154) 1 NC_010581.1 PFAM: transglutaminase domain protein; KEGG: rle:RL1406 putative transglutaminase family protein; transglutaminase domain-containing protein 1010154 6200625 Bind_0886 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase domain-containing protein YP_001832025.1 1009312 R 395963 CDS YP_001832026.1 182677880 6200662 complement(1010758..1011330) 1 NC_010581.1 PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein; PEBP family protein 1011330 6200662 Bind_0887 Beijerinckia indica subsp. indica ATCC 9039 PEBP family protein YP_001832026.1 1010758 R 395963 CDS YP_001832027.1 182677881 6200747 complement(1011639..1012715) 1 NC_010581.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1012715 prfA 6200747 prfA Beijerinckia indica subsp. indica ATCC 9039 peptide chain release factor 1 YP_001832027.1 1011639 R 395963 CDS YP_001832028.1 182677882 6201001 complement(1012979..1015246) 1 NC_010581.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: azc:AZC_4491 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase PtsP 1015246 6201001 Bind_0890 Beijerinckia indica subsp. indica ATCC 9039 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001832028.1 1012979 R 395963 CDS YP_001832029.1 182677883 6201817 complement(1015522..1016757) 1 NC_010581.1 KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 1016757 6201817 Bind_0891 Beijerinckia indica subsp. indica ATCC 9039 aspartate kinase YP_001832029.1 1015522 R 395963 CDS YP_001832030.1 182677884 6199197 complement(1016957..1017265) 1 NC_010581.1 KEGG: rpb:RPB_3901 transglycosylase-associated protein; hypothetical protein 1017265 6199197 Bind_0892 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832030.1 1016957 R 395963 CDS YP_001832031.1 182677885 6199180 1017520..1017816 1 NC_010581.1 PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 protein of unknown function DUF339; hypothetical protein 1017816 6199180 Bind_0893 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832031.1 1017520 D 395963 CDS YP_001832032.1 182677886 6198242 1017855..1021376 1 NC_010581.1 KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1021376 6198242 Bind_0894 Beijerinckia indica subsp. indica ATCC 9039 transcription-repair coupling factor YP_001832032.1 1017855 D 395963 CDS YP_001832033.1 182677887 6198374 1021381..1021692 1 NC_010581.1 hypothetical protein 1021692 6198374 Bind_0895 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832033.1 1021381 D 395963 CDS YP_001832034.1 182677888 6200366 complement(1021780..1023798) 1 NC_010581.1 KEGG: bte:BTH_I3136 hypothetical protein; hypothetical protein 1023798 6200366 Bind_0896 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832034.1 1021780 R 395963 CDS YP_001832035.1 182677889 6200690 1024132..1024707 1 NC_010581.1 PFAM: protein of unknown function DUF1275; KEGG: azc:AZC_4159 hypothetical protein; hypothetical protein 1024707 6200690 Bind_0897 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832035.1 1024132 D 395963 CDS YP_001832036.1 182677890 6200626 1024923..1025156 1 NC_010581.1 hypothetical protein 1025156 6200626 Bind_0898 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832036.1 1024923 D 395963 CDS YP_001832037.1 182677891 6201057 1025517..1026830 1 NC_010581.1 KEGG: dar:Daro_2929 hypothetical protein; hypothetical protein 1026830 6201057 Bind_0899 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832037.1 1025517 D 395963 CDS YP_001832038.1 182677892 6200605 complement(1026844..1027425) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: gbe:GbCGDNIH1_1544 transcriptional regulator, TetR family; TetR family transcriptional regulator 1027425 6200605 Bind_0900 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832038.1 1026844 R 395963 CDS YP_001832039.1 182677893 6201305 complement(1027567..1030755) 1 NC_010581.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: gbe:GbCGDNIH1_1542 acriflavin resistance plasma membrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1030755 6201305 Bind_0901 Beijerinckia indica subsp. indica ATCC 9039 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001832039.1 1027567 R 395963 CDS YP_001832040.1 182677894 6200969 complement(1030878..1032299) 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1543 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit 1032299 6200969 Bind_0902 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001832040.1 1030878 R 395963 CDS YP_001832041.1 182677895 6200709 complement(1032346..1032495) 1 NC_010581.1 hypothetical protein 1032495 6200709 Bind_0903 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832041.1 1032346 R 395963 CDS YP_001832042.1 182677896 6201812 1032726..1033733 1 NC_010581.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family; aliphatic sulfonate ABC transporter substrate-binding protein 1033733 6201812 Bind_0904 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001832042.1 1032726 D 395963 CDS YP_001832043.1 182677897 6199724 1033780..1034877 1 NC_010581.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ava:Ava_4760 flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1034877 6199724 Bind_0905 Beijerinckia indica subsp. indica ATCC 9039 NADH:flavin oxidoreductase YP_001832043.1 1033780 D 395963 CDS YP_001832044.1 182677898 6201754 complement(1034971..1036296) 1 NC_010581.1 KEGG: mlo:mlr7299 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 1036296 6201754 Bind_0906 Beijerinckia indica subsp. indica ATCC 9039 nitrilotriacetate monooxygenase component A YP_001832044.1 1034971 R 395963 CDS YP_001832045.1 182677899 6201755 1036702..1038567 1 NC_010581.1 PFAM: cytochrome c class I; KEGG: noc:Noc_2145 L-sorbosone dehydrogenase; cytochrome c class I 1038567 6201755 Bind_0907 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c class I YP_001832045.1 1036702 D 395963 CDS YP_001832046.1 182677900 6201815 complement(1038729..1040735) 1 NC_010581.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1040735 6201815 Bind_0908 Beijerinckia indica subsp. indica ATCC 9039 aconitate hydratase YP_001832046.1 1038729 R 395963 CDS YP_001832047.1 182677901 6201824 complement(1041032..1042018) 1 NC_010581.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0902 alcohol dehydrogenase; zinc-binding alcohol dehydrogenase family protein 1042018 6201824 Bind_0909 Beijerinckia indica subsp. indica ATCC 9039 zinc-binding alcohol dehydrogenase family protein YP_001832047.1 1041032 R 395963 CDS YP_001832048.1 182677902 6200903 1042498..1042806 1 NC_010581.1 KEGG: rpc:RPC_3285 hypothetical protein; hypothetical protein 1042806 6200903 Bind_0910 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832048.1 1042498 D 395963 CDS YP_001832049.1 182677903 6200706 1042997..1043302 1 NC_010581.1 KEGG: gox:GOX2170 transmembrane protein; hypothetical protein 1043302 6200706 Bind_0911 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832049.1 1042997 D 395963 CDS YP_001832050.1 182677904 6200917 complement(1043311..1044528) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_0630 major facilitator superfamily MFS_1; major facilitator transporter 1044528 6200917 Bind_0912 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832050.1 1043311 R 395963 CDS YP_001832051.1 182677905 6201263 complement(1044525..1045583) 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: gdi:GDI1640 oxidoreductase; aldo/keto reductase 1045583 6201263 Bind_0913 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001832051.1 1044525 R 395963 CDS YP_001832052.1 182677906 6201404 1045807..1047816 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2; glycosyl transferase family protein 1047816 6201404 Bind_0914 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001832052.1 1045807 D 395963 CDS YP_001832053.1 182677907 6201733 1047926..1048747 1 NC_010581.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase; inositol monophosphatase 1048747 6201733 Bind_0915 Beijerinckia indica subsp. indica ATCC 9039 inositol monophosphatase YP_001832053.1 1047926 D 395963 CDS YP_001832054.1 182677908 6200649 1048845..1049093 1 NC_010581.1 KEGG: azc:AZC_2380 hypothetical protein; hypothetical protein 1049093 6200649 Bind_0916 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832054.1 1048845 D 395963 CDS YP_001832055.1 182677909 6201530 complement(1049481..1049702) 1 NC_010581.1 KEGG: xau:Xaut_1414 hypothetical protein; hypothetical protein 1049702 6201530 Bind_0917 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832055.1 1049481 R 395963 CDS YP_001832056.1 182677910 6201734 complement(1049957..1050190) 1 NC_010581.1 hypothetical protein 1050190 6201734 Bind_0918 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832056.1 1049957 R 395963 CDS YP_001832057.1 182677911 6201787 complement(1050174..1050788) 1 NC_010581.1 PFAM: autoinducer synthesis protein; KEGG: bbt:BBta_5196 autoinducer synthesis protein; autoinducer synthesis protein 1050788 6201787 Bind_0919 Beijerinckia indica subsp. indica ATCC 9039 autoinducer synthesis protein YP_001832057.1 1050174 R 395963 CDS YP_001832058.1 182677912 6200888 complement(1050866..1051672) 1 NC_010581.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: dsh:Dshi_2852 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1051672 6200888 Bind_0920 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001832058.1 1050866 R 395963 CDS YP_001832059.1 182677913 6201277 complement(1052492..1053124) 1 NC_010581.1 PFAM: ribonuclease HII/HIII; KEGG: sme:SMc00867 ribonuclease HII; ribonuclease H 1053124 6201277 Bind_0921 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease H YP_001832059.1 1052492 R 395963 CDS YP_001832060.1 182677914 6201786 complement(1053251..1054414) 1 NC_010581.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bmt:BSUIS_A0415 radical SAM domain protein; radical SAM domain-containing protein 1054414 6201786 Bind_0922 Beijerinckia indica subsp. indica ATCC 9039 radical SAM domain-containing protein YP_001832060.1 1053251 R 395963 CDS YP_001832061.1 182677915 6201747 complement(1054481..1055719) 1 NC_010581.1 PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_2584 monooxygenase, FAD-binding; monooxygenase FAD-binding 1055719 6201747 Bind_0923 Beijerinckia indica subsp. indica ATCC 9039 monooxygenase FAD-binding YP_001832061.1 1054481 R 395963 CDS YP_001832062.1 182677916 6201744 complement(1055765..1056025) 1 NC_010581.1 KEGG: mes:Meso_1118 hypothetical protein; hypothetical protein 1056025 6201744 Bind_0924 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832062.1 1055765 R 395963 CDS YP_001832063.1 182677917 6200702 1056247..1057014 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_3461 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 1057014 6200702 Bind_0925 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832063.1 1056247 D 395963 CDS YP_001832064.1 182677918 6201732 1057306..1058142 1 NC_010581.1 KEGG: rpa:RPA3429 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein; serine O-acetyltransferase 1058142 6201732 Bind_0926 Beijerinckia indica subsp. indica ATCC 9039 serine O-acetyltransferase YP_001832064.1 1057306 D 395963 CDS YP_001832065.1 182677919 6201648 1058347..1058742 1 NC_010581.1 KEGG: rpc:RPC_3143 hypothetical protein; hypothetical protein 1058742 6201648 Bind_0927 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832065.1 1058347 D 395963 CDS YP_001832066.1 182677920 6201066 1058915..1061272 1 NC_010581.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rpe:RPE_3166 ornithine decarboxylase; ornithine decarboxylase 1061272 6201066 Bind_0928 Beijerinckia indica subsp. indica ATCC 9039 ornithine decarboxylase YP_001832066.1 1058915 D 395963 CDS YP_001832067.1 182677921 6200049 1061512..1062072 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0639 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1062072 6200049 Bind_0929 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832067.1 1061512 D 395963 CDS YP_001832068.1 182677922 6201794 complement(1062117..1062767) 1 NC_010581.1 PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 protein of unknown function DUF1457; hypothetical protein 1062767 6201794 Bind_0930 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832068.1 1062117 R 395963 CDS YP_001832069.1 182677923 6201793 complement(1063055..1066072) 1 NC_010581.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mex:Mext_3659 ribonuclease, Rne/Rng family; ribonuclease 1066072 6201793 Bind_0931 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease YP_001832069.1 1063055 R 395963 CDS YP_001832070.1 182677924 6198195 1066218..1066439 1 NC_010581.1 hypothetical protein 1066439 6198195 Bind_0932 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832070.1 1066218 D 395963 CDS YP_001832071.1 182677925 6199743 1067187..1068704 1 NC_010581.1 PFAM: cell wall hydrolase/autolysin; KEGG: rpe:RPE_2978 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1068704 6199743 Bind_0933 Beijerinckia indica subsp. indica ATCC 9039 N-acetylmuramoyl-L-alanine amidase YP_001832071.1 1067187 D 395963 CDS YP_001832072.1 182677926 6199983 1069249..1071660 1 NC_010581.1 KEGG: mex:Mext_3662 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 1071660 6199983 Bind_0934 Beijerinckia indica subsp. indica ATCC 9039 1A family penicillin-binding protein YP_001832072.1 1069249 D 395963 CDS YP_001832073.1 182677927 6201102 1071872..1072579 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cak:Caul_3346 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 1072579 6201102 Bind_0935 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001832073.1 1071872 D 395963 CDS YP_001832074.1 182677928 6201647 1073128..1074465 1 NC_010581.1 PFAM: Erythromycin esterase; KEGG: mes:Meso_3528 erythromycin esterase; erythromycin esterase 1074465 6201647 Bind_0937 Beijerinckia indica subsp. indica ATCC 9039 erythromycin esterase YP_001832074.1 1073128 D 395963 CDS YP_001832075.1 182677929 6200050 join(1076787..1076855,1076857..1077918) 1 NC_010581.1 KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein 1077918 6200050 Bind_0939 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832075.1 1076787 D 395963 CDS YP_001832076.1 182677930 6201658 1078149..1078946 1 NC_010581.1 PFAM: Rhomboid family protein; KEGG: xau:Xaut_2361 rhomboid family protein; rhomboid family protein 1078946 6201658 Bind_0940 Beijerinckia indica subsp. indica ATCC 9039 rhomboid family protein YP_001832076.1 1078149 D 395963 CDS YP_001832077.1 182677931 6201412 complement(1079798..1081666) 1 NC_010581.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2516 ABC transporter-related protein; ABC transporter-like protein 1081666 6201412 Bind_0942 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832077.1 1079798 R 395963 CDS YP_001832078.1 182677932 6201248 complement(1081824..1082633) 1 NC_010581.1 KEGG: mex:Mext_2247 hypothetical protein; hypothetical protein 1082633 6201248 Bind_0943 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832078.1 1081824 R 395963 CDS YP_001832079.1 182677933 6201273 1082654..1083958 1 NC_010581.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; helix-turn-helix domain protein; KEGG: azc:AZC_3102 3,4-dihydroxy-2-butanone 4-phosphate synthase; XRE family transcriptional regulator 1083958 6201273 Bind_0944 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001832079.1 1082654 D 395963 CDS YP_001832080.1 182677934 6201398 1083985..1084986 1 NC_010581.1 KEGG: bmt:BSUIS_B1014 hypothetical protein; hypothetical protein 1084986 6201398 Bind_0945 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832080.1 1083985 D 395963 CDS YP_001832081.1 182677935 6201659 complement(1085002..1086048) 1 NC_010581.1 PFAM: histone deacetylase superfamily; KEGG: xau:Xaut_1155 histone deacetylase superfamily; histone deacetylase superfamily protein 1086048 6201659 Bind_0946 Beijerinckia indica subsp. indica ATCC 9039 histone deacetylase superfamily protein YP_001832081.1 1085002 R 395963 CDS YP_001832082.1 182677936 6200658 complement(1086228..1087184) 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: mlo:mll3894 hypothetical protein; metallophosphoesterase 1087184 6200658 Bind_0947 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001832082.1 1086228 R 395963 CDS YP_001832083.1 182677937 6200754 complement(1087715..1087948) 1 NC_010581.1 hypothetical protein 1087948 6200754 Bind_0948 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832083.1 1087715 R 395963 CDS YP_001832084.1 182677938 6199334 1088168..1088962 1 NC_010581.1 KEGG: mex:Mext_2900 hypothetical protein; hypothetical protein 1088962 6199334 Bind_0949 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832084.1 1088168 D 395963 CDS YP_001832085.1 182677939 6201776 complement(1088983..1089966) 1 NC_010581.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: afw:Anae109_2819 quinone oxidoreductase putative YhdH/YhfP; quinone oxidoreductase 1089966 6201776 Bind_0950 Beijerinckia indica subsp. indica ATCC 9039 quinone oxidoreductase YP_001832085.1 1088983 R 395963 CDS YP_001832086.1 182677940 6201745 complement(1090123..1091136) 1 NC_010581.1 KEGG: mlo:mlr7750 alginate lyase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein 1091136 6201745 Bind_0951 Beijerinckia indica subsp. indica ATCC 9039 zinc-binding alcohol dehydrogenase family protein YP_001832086.1 1090123 R 395963 CDS YP_001832087.1 182677941 6198128 1091261..1091614 1 NC_010581.1 PFAM: helix-turn-helix HxlR type; KEGG: gox:GOX2595 hypothetical protein; HxlR family transcriptional regulator 1091614 6198128 Bind_0952 Beijerinckia indica subsp. indica ATCC 9039 HxlR family transcriptional regulator YP_001832087.1 1091261 D 395963 CDS YP_001832088.1 182677942 6198271 complement(1091684..1092610) 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein; beta-lactamase domain-containing protein 1092610 6198271 Bind_0953 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001832088.1 1091684 R 395963 CDS YP_001832089.1 182677943 6200524 1092923..1093264 1 NC_010581.1 PFAM: regulatory protein ArsR; KEGG: bja:bll5291 transcriptional regulatory protein; ArsR family transcriptional regulator 1093264 6200524 Bind_0955 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001832089.1 1092923 D 395963 CDS YP_001832090.1 182677944 6200378 complement(1093866..1095194) 1 NC_010581.1 PFAM: Chloride channel core; KEGG: bra:BRADO3095 putative H(+)/Cl(-) exchange transporter; chloride channel core protein 1095194 6200378 Bind_0957 Beijerinckia indica subsp. indica ATCC 9039 chloride channel core protein YP_001832090.1 1093866 R 395963 CDS YP_001832091.1 182677945 6198308 complement(1095396..1096124) 1 NC_010581.1 PFAM: phosphoribosyltransferase; KEGG: mes:Meso_3530 phosphoribosyltransferase; phosphoribosyltransferase 1096124 6198308 Bind_0958 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosyltransferase YP_001832091.1 1095396 R 395963 CDS YP_001832092.1 182677946 6198166 complement(1096127..1096789) 1 NC_010581.1 KEGG: mva:Mvan_1399 hypothetical protein; hypothetical protein 1096789 6198166 Bind_0959 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832092.1 1096127 R 395963 CDS YP_001832093.1 182677947 6201823 1097078..1097959 1 NC_010581.1 PFAM: protein of unknown function DUF72; KEGG: ret:RHE_CH00317 hypothetical protein; hypothetical protein 1097959 6201823 Bind_0960 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832093.1 1097078 D 395963 CDS YP_001832094.1 182677948 6201275 complement(1098001..1099056) 1 NC_010581.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0232 flavin oxidoreductase; NADH:flavin oxidoreductase 1099056 6201275 Bind_0961 Beijerinckia indica subsp. indica ATCC 9039 NADH:flavin oxidoreductase YP_001832094.1 1098001 R 395963 CDS YP_001832095.1 182677949 6198283 complement(1099222..1099824) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B1606 transcriptional regulator, TetR family; TetR family transcriptional regulator 1099824 6198283 Bind_0962 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832095.1 1099222 R 395963 CDS YP_001832096.1 182677950 6198207 complement(1100079..1101425) 1 NC_010581.1 KEGG: xau:Xaut_3567 hypothetical protein; hypothetical protein 1101425 6198207 Bind_0963 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832096.1 1100079 R 395963 CDS YP_001832097.1 182677951 6198604 1101844..1102254 1 NC_010581.1 KEGG: xau:Xaut_0417 hypothetical protein; hypothetical protein 1102254 6198604 Bind_0964 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832097.1 1101844 D 395963 CDS YP_001832098.1 182677952 6199134 1102512..1104833 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA1823 TonB dependent receptor; TonB-dependent receptor 1104833 6199134 Bind_0965 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001832098.1 1102512 D 395963 CDS YP_001832099.1 182677953 6200207 1105042..1105287 1 NC_010581.1 KEGG: rpd:RPD_0348 UspA; hypothetical protein 1105287 6200207 Bind_0966 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832099.1 1105042 D 395963 CDS YP_001832100.1 182677954 6199984 1105586..1105807 1 NC_010581.1 KEGG: bra:BRADO6018 conserved hypothetical protein; putative signal peptide; hypothetical protein 1105807 6199984 Bind_0967 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832100.1 1105586 D 395963 CDS YP_001832101.1 182677955 6199564 complement(1106150..1107076) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cak:Caul_4334 transcriptional regulator, LysR family; LysR family transcriptional regulator 1107076 6199564 Bind_0968 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832101.1 1106150 R 395963 CDS YP_001832102.1 182677956 6200581 1107642..1109267 1 NC_010581.1 PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 1109267 6200581 Bind_0969 Beijerinckia indica subsp. indica ATCC 9039 Pyrrolo-quinoline quinone YP_001832102.1 1107642 D 395963 CDS YP_001832103.1 182677957 6201149 1109457..1110644 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3477 major facilitator superfamily MFS_1; major facilitator transporter 1110644 6201149 Bind_0970 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832103.1 1109457 D 395963 CDS YP_001832104.1 182677958 6200582 1110772..1111635 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_4587 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1111635 6200582 Bind_0971 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832104.1 1110772 D 395963 CDS YP_001832105.1 182677959 6198617 1111678..1112232 1 NC_010581.1 PFAM: MaoC domain protein dehydratase; KEGG: bja:blr0424 similar to monoamine oxidase regulatory protein; dehydratase 1112232 6198617 Bind_0972 Beijerinckia indica subsp. indica ATCC 9039 dehydratase YP_001832105.1 1111678 D 395963 CDS YP_001832106.1 182677960 6200656 1112372..1114588 1 NC_010581.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: mlo:mlr6940 catalase/peroxidase; catalase/peroxidase HPI 1114588 6200656 Bind_0973 Beijerinckia indica subsp. indica ATCC 9039 catalase/peroxidase HPI YP_001832106.1 1112372 D 395963 CDS YP_001832107.1 182677961 6198410 complement(1114812..1115741) 1 NC_010581.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: azc:AZC_4108 two component transcriptional regulator; two component LuxR family transcriptional regulator 1115741 6198410 Bind_0974 Beijerinckia indica subsp. indica ATCC 9039 two component LuxR family transcriptional regulator YP_001832107.1 1114812 R 395963 CDS YP_001832108.1 182677962 6198432 complement(1115731..1119123) 1 NC_010581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azc:AZC_4107 multi-sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 1119123 6198432 Bind_0975 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor hybrid histidine kinase YP_001832108.1 1115731 R 395963 CDS YP_001832109.1 182677963 6199613 1119427..1120707 1 NC_010581.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: azc:AZC_4106 amide-UreA binding protein precursor; urea ABC transporter urea binding protein 1120707 6199613 Bind_0976 Beijerinckia indica subsp. indica ATCC 9039 urea ABC transporter urea binding protein YP_001832109.1 1119427 D 395963 CDS YP_001832110.1 182677964 6199361 1120781..1121707 1 NC_010581.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: azc:AZC_4105 putative branched-chain amino acid transport system permease protein; urea ABC transporter permease UrtB 1121707 6199361 Bind_0977 Beijerinckia indica subsp. indica ATCC 9039 urea ABC transporter permease UrtB YP_001832110.1 1120781 D 395963 CDS YP_001832111.1 182677965 6198845 1121718..1122848 1 NC_010581.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: azc:AZC_4104 ABC transporter permease protein; urea ABC transporter permease UrtC 1122848 6198845 Bind_0978 Beijerinckia indica subsp. indica ATCC 9039 urea ABC transporter permease UrtC YP_001832111.1 1121718 D 395963 CDS YP_001832112.1 182677966 6198416 1122859..1123623 1 NC_010581.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: azc:AZC_4103 ABC transporter ATP-binding protein; urea ABC transporter ATP-binding protein UrtD 1123623 6198416 Bind_0979 Beijerinckia indica subsp. indica ATCC 9039 urea ABC transporter ATP-binding protein UrtD YP_001832112.1 1122859 D 395963 CDS YP_001832113.1 182677967 6198618 1123635..1124324 1 NC_010581.1 KEGG: azc:AZC_4102 putative ABC transporter ATP-binding component; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 1124324 6198618 Bind_0980 Beijerinckia indica subsp. indica ATCC 9039 urea ABC transporter ATP-binding protein UrtE YP_001832113.1 1123635 D 395963 CDS YP_001832114.1 182677968 6198844 1124351..1125583 1 NC_010581.1 PFAM: Acetamidase/Formamidase; KEGG: rpd:RPD_3859 formamidase; formamidase 1125583 6198844 Bind_0981 Beijerinckia indica subsp. indica ATCC 9039 formamidase YP_001832114.1 1124351 D 395963 CDS YP_001832115.1 182677969 6200351 1125659..1126009 1 NC_010581.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: bra:BRADO6891 putative formamidase regulatory protein FmdB; FmdB family regulatory protein 1126009 6200351 Bind_0982 Beijerinckia indica subsp. indica ATCC 9039 FmdB family regulatory protein YP_001832115.1 1125659 D 395963 CDS YP_001832116.1 182677970 6200307 complement(1126230..1127480) 1 NC_010581.1 KEGG: mfa:Mfla_0157 hypothetical protein; hypothetical protein 1127480 6200307 Bind_0983 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832116.1 1126230 R 395963 CDS YP_001832117.1 182677971 6200533 complement(1127814..1128677) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sco:SCO6555 LysR-family transcriptional regulator; LysR family transcriptional regulator 1128677 6200533 Bind_0984 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832117.1 1127814 R 395963 CDS YP_001832118.1 182677972 6198761 1128802..1130019 1 NC_010581.1 KEGG: bld:BLi03580 OxdC; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; oxalate decarboxylase 1130019 6198761 Bind_0985 Beijerinckia indica subsp. indica ATCC 9039 oxalate decarboxylase YP_001832118.1 1128802 D 395963 CDS YP_001832119.1 182677973 6198526 1130143..1131813 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease; major facilitator transporter 1131813 6198526 Bind_0986 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832119.1 1130143 D 395963 CDS YP_001832120.1 182677974 6200586 complement(1131856..1132806) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1079 transcriptional regulator; LysR family transcriptional regulator 1132806 6200586 Bind_0987 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832120.1 1131856 R 395963 CDS YP_001832121.1 182677975 6200684 1133046..1133519 1 NC_010581.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bja:bll3138 formate dehydrogenase subunit gamma; NADH dehydrogenase (ubiquinone) 24 kDa subunit 1133519 6200684 Bind_0988 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001832121.1 1133046 D 395963 CDS YP_001832122.1 182677976 6201436 1133516..1135066 1 NC_010581.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bja:bll3137 NADH dehydrogenase I chain F; NADH dehydrogenase (quinone) 1135066 6201436 Bind_0989 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase (quinone) YP_001832122.1 1133516 D 395963 CDS YP_001832123.1 182677977 6198934 1135122..1137977 1 NC_010581.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 1137977 6198934 Bind_0990 Beijerinckia indica subsp. indica ATCC 9039 formate dehydrogenase subunit alpha YP_001832123.1 1135122 D 395963 CDS YP_001832124.1 182677978 6201337 1137981..1138211 1 NC_010581.1 KEGG: mex:Mext_4407 hypothetical protein; hypothetical protein 1138211 6201337 Bind_0991 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832124.1 1137981 D 395963 CDS YP_001832125.1 182677979 6201064 1138323..1139537 1 NC_010581.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: bmu:Bmul_5398 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 1139537 6201064 Bind_0992 Beijerinckia indica subsp. indica ATCC 9039 molybdenum cofactor synthesis domain-containing protein YP_001832125.1 1138323 D 395963 CDS YP_001832126.1 182677980 6201244 1139596..1140225 1 NC_010581.1 KEGG: gdi:GDI0167 putative molybdopterin-guanine dinucleotide biosynthesis protein A; putative molybdopterin-guanine dinucleotide biosynthesis protein A 1140225 6201244 Bind_0993 Beijerinckia indica subsp. indica ATCC 9039 putative molybdopterin-guanine dinucleotide biosynthesis protein A YP_001832126.1 1139596 D 395963 CDS YP_001832127.1 182677981 6199026 1140212..1141099 1 NC_010581.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: gdi:GDI1145 putative formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 1141099 6199026 Bind_0994 Beijerinckia indica subsp. indica ATCC 9039 formate dehydrogenase family accessory protein FdhD YP_001832127.1 1140212 D 395963 CDS YP_001832128.1 182677982 6198650 complement(1141102..1141554) 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: noc:Noc_2767 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1141554 6198650 Bind_0995 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001832128.1 1141102 R 395963 CDS YP_001832129.1 182677983 6199872 1142570..1144045 1 NC_010581.1 PFAM: protein of unknown function UPF0061; KEGG: rpe:RPE_3277 protein of unknown function UPF0061; hypothetical protein 1144045 6199872 Bind_0997 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832129.1 1142570 D 395963 CDS YP_001832130.1 182677984 6200161 1144142..1145152 1 NC_010581.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_0946 dihydrouridine synthase DuS; YjbN family TIM-barrel protein 1145152 6200161 Bind_0998 Beijerinckia indica subsp. indica ATCC 9039 YjbN family TIM-barrel protein YP_001832130.1 1144142 D 395963 CDS YP_001832131.1 182677985 6201268 complement(1145160..1146083) 1 NC_010581.1 PFAM: protein of unknown function DUF815; KEGG: mlo:mlr1073 hypothetical protein; hypothetical protein 1146083 6201268 Bind_0999 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832131.1 1145160 R 395963 CDS YP_001832132.1 182677986 6199446 1146514..1146849 1 NC_010581.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: xau:Xaut_4308 preprotein translocase, YajC subunit; preprotein translocase subunit YajC 1146849 6199446 Bind_1000 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit YajC YP_001832132.1 1146514 D 395963 CDS YP_001832133.1 182677987 6200001 1146947..1148542 1 NC_010581.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4228 protein-export membrane protein SecD; protein-export membrane protein SecD 1148542 6200001 Bind_1001 Beijerinckia indica subsp. indica ATCC 9039 protein-export membrane protein SecD YP_001832133.1 1146947 D 395963 CDS YP_001832134.1 182677988 6201078 1148591..1149550 1 NC_010581.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: bbt:BBta_4405 preprotein translocase subunit SecF; protein-export membrane protein SecF 1149550 6201078 Bind_1002 Beijerinckia indica subsp. indica ATCC 9039 protein-export membrane protein SecF YP_001832134.1 1148591 D 395963 CDS YP_001832135.1 182677989 6199616 1149671..1150045 1 NC_010581.1 PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 protein of unknown function DUF498; hypothetical protein 1150045 6199616 Bind_1003 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832135.1 1149671 D 395963 CDS YP_001832136.1 182677990 6200816 1150045..1150932 1 NC_010581.1 KEGG: mex:Mext_4225 squalene/phytoene synthase; squalene/phytoene synthase 1150932 6200816 Bind_1004 Beijerinckia indica subsp. indica ATCC 9039 squalene/phytoene synthase YP_001832136.1 1150045 D 395963 CDS YP_001832137.1 182677991 6199609 1151029..1152342 1 NC_010581.1 KEGG: rfr:Rfer_3382 hypothetical protein; hypothetical protein 1152342 6199609 Bind_1005 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832137.1 1151029 D 395963 CDS YP_001832138.1 182677992 6198502 1152925..1155930 1 NC_010581.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1155930 ileS 6198502 ileS Beijerinckia indica subsp. indica ATCC 9039 isoleucyl-tRNA synthetase YP_001832138.1 1152925 D 395963 CDS YP_001832139.1 182677993 6200809 1155959..1156462 1 NC_010581.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1156462 6200809 Bind_1007 Beijerinckia indica subsp. indica ATCC 9039 lipoprotein signal peptidase YP_001832139.1 1155959 D 395963 CDS YP_001832140.1 182677994 6201405 1156778..1157503 1 NC_010581.1 KEGG: mex:Mext_2327 hypothetical protein; hypothetical protein 1157503 6201405 Bind_1008 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832140.1 1156778 D 395963 CDS YP_001832141.1 182677995 6200437 1157789..1159195 1 NC_010581.1 PFAM: peptidase M16 domain protein; KEGG: azc:AZC_4242 putative protease precursor; peptidase M16 domain-containing protein 1159195 6200437 Bind_1009 Beijerinckia indica subsp. indica ATCC 9039 peptidase M16 domain-containing protein YP_001832141.1 1157789 D 395963 CDS YP_001832142.1 182677996 6198697 1159389..1160669 1 NC_010581.1 PFAM: peptidase M16 domain protein; KEGG: bbt:BBta_1712 putative Zn-dependent protease; peptidase M16 domain-containing protein 1160669 6198697 Bind_1010 Beijerinckia indica subsp. indica ATCC 9039 peptidase M16 domain-containing protein YP_001832142.1 1159389 D 395963 CDS YP_001832143.1 182677997 6199443 1160705..1162618 1 NC_010581.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: nwi:Nwi_2548 DNA mismatch repair protein; DNA mismatch repair protein MutL 1162618 6199443 Bind_1011 Beijerinckia indica subsp. indica ATCC 9039 DNA mismatch repair protein MutL YP_001832143.1 1160705 D 395963 CDS YP_001832144.1 182677998 6198727 1162658..1163245 1 NC_010581.1 KEGG: oan:Oant_3962 hypothetical protein; hypothetical protein 1163245 6198727 Bind_1012 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832144.1 1162658 D 395963 CDS YP_001832145.1 182677999 6199754 1163288..1164553 1 NC_010581.1 KEGG: btr:Btr_0639 hypothetical protein; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 1164553 6199754 Bind_1013 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylamine--glycine ligase YP_001832145.1 1163288 D 395963 CDS YP_001832146.1 182678000 6201783 1164956..1165150 1 NC_010581.1 KEGG: dre:573024 zgc:56152; hypothetical protein 1165150 6201783 Bind_1014 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832146.1 1164956 D 395963 CDS YP_001832147.1 182678001 6198997 complement(1165485..1165919) 1 NC_010581.1 PFAM: helix-turn-helix HxlR type; transcriptional regulator PadR family protein; KEGG: bxe:Bxe_A1731 putative transcriptional regulator; HxlR family transcriptional regulator 1165919 6198997 Bind_1015 Beijerinckia indica subsp. indica ATCC 9039 HxlR family transcriptional regulator YP_001832147.1 1165485 R 395963 CDS YP_001832148.1 182678002 6198176 1166025..1166798 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1732 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1166798 6198176 Bind_1016 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832148.1 1166025 D 395963 CDS YP_001832149.1 182678003 6200668 complement(1167019..1167378) 1 NC_010581.1 PFAM: arsenate reductase and related; KEGG: cak:Caul_2487 arsenate reductase and related; arsenate reductase-like protein 1167378 6200668 Bind_1017 Beijerinckia indica subsp. indica ATCC 9039 arsenate reductase-like protein YP_001832149.1 1167019 R 395963 CDS YP_001832150.1 182678004 6198956 complement(1167533..1168066) 1 NC_010581.1 PFAM: heat shock protein Hsp20; KEGG: mes:Meso_2276 heat shock protein HSP20; heat shock protein Hsp20 1168066 6198956 Bind_1018 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein Hsp20 YP_001832150.1 1167533 R 395963 CDS YP_001832151.1 182678005 6198563 complement(1168461..1169129) 1 NC_010581.1 KEGG: mex:Mext_1528 hypothetical protein; hypothetical protein 1169129 6198563 Bind_1019 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832151.1 1168461 R 395963 CDS YP_001832152.1 182678006 6199033 1169523..1170389 1 NC_010581.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: mmr:Mmar10_2449 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1170389 6199033 Bind_1020 Beijerinckia indica subsp. indica ATCC 9039 3'(2'),5'-bisphosphate nucleotidase YP_001832152.1 1169523 D 395963 CDS YP_001832153.1 182678007 6198499 1170558..1171151 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: rpe:RPE_4288 uncharacterised conserved protein UCP033924; hypothetical protein 1171151 6198499 Bind_1021 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832153.1 1170558 D 395963 CDS YP_001832154.1 182678008 6198565 1171294..1172052 1 NC_010581.1 KEGG: azc:AZC_1080 hypothetical protein; hypothetical protein 1172052 6198565 Bind_1022 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832154.1 1171294 D 395963 CDS YP_001832155.1 182678009 6200324 complement(1172176..1172496) 1 NC_010581.1 hypothetical protein 1172496 6200324 Bind_1023 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832155.1 1172176 R 395963 CDS YP_001832156.1 182678010 6198914 complement(1172685..1173362) 1 NC_010581.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: bja:blr5680 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1173362 6198914 Bind_1024 Beijerinckia indica subsp. indica ATCC 9039 ribulose-phosphate 3-epimerase YP_001832156.1 1172685 R 395963 CDS YP_001832157.1 182678011 6199041 1173728..1174285 1 NC_010581.1 KEGG: mlo:mll6729 hypothetical protein; hypothetical protein 1174285 6199041 Bind_1025 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832157.1 1173728 D 395963 CDS YP_001832158.1 182678012 6198754 complement(1174710..1175522) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03424 short chain dehydrogenase; short chain dehydrogenase 1175522 6198754 Bind_1026 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001832158.1 1174710 R 395963 CDS YP_001832159.1 182678013 6198590 complement(1175731..1177065) 1 NC_010581.1 PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_7179 hypothetical protein; FAD linked oxidase domain-containing protein 1177065 6198590 Bind_1027 Beijerinckia indica subsp. indica ATCC 9039 FAD linked oxidase domain-containing protein YP_001832159.1 1175731 R 395963 CDS YP_001832160.1 182678014 6199039 complement(1177056..1177511) 1 NC_010581.1 KEGG: ret:RHE_CH03426 hypothetical protein; hypothetical protein 1177511 6199039 Bind_1028 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832160.1 1177056 R 395963 CDS YP_001832161.1 182678015 6201841 complement(1177519..1178976) 1 NC_010581.1 PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 putative integral membrane prenyltransferase protein; hypothetical protein 1178976 6201841 Bind_1029 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832161.1 1177519 R 395963 CDS YP_001832162.1 182678016 6199559 complement(1179467..1180024) 1 NC_010581.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: rru:Rru_A3564 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase family protein 1180024 6199559 Bind_1030 Beijerinckia indica subsp. indica ATCC 9039 histidinol-phosphate phosphatase family protein YP_001832162.1 1179467 R 395963 CDS YP_001832163.1 182678017 6198576 complement(1180224..1181729) 1 NC_010581.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: pla:Plav_1895 RfaE bifunctional protein; rfaE bifunctional protein 1181729 6198576 Bind_1031 Beijerinckia indica subsp. indica ATCC 9039 rfaE bifunctional protein YP_001832163.1 1180224 R 395963 CDS YP_001832164.1 182678018 6198468 complement(1182355..1183485) 1 NC_010581.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: xau:Xaut_3549 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1183485 6198468 Bind_1032 Beijerinckia indica subsp. indica ATCC 9039 mannose-6-phosphate isomerase YP_001832164.1 1182355 R 395963 CDS YP_001832165.1 182678019 6198683 complement(1183796..1184998) 1 NC_010581.1 PFAM: polysaccharide export protein; KEGG: bra:BRADO2217 putative capsule polysaccharide export outer membrane protein precursor; polysaccharide export protein 1184998 6198683 Bind_1033 Beijerinckia indica subsp. indica ATCC 9039 polysaccharide export protein YP_001832165.1 1183796 R 395963 CDS YP_001832166.1 182678020 6199987 complement(1185432..1186904) 1 NC_010581.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bra:BRADO2232 putative UDP-glucose lipid carrier transferase; putative membrane protein; undecaprenyl-phosphate glucose phosphotransferase 1186904 6199987 Bind_1034 Beijerinckia indica subsp. indica ATCC 9039 undecaprenyl-phosphate glucose phosphotransferase YP_001832166.1 1185432 R 395963 CDS YP_001832167.1 182678021 6198847 1187940..1188212 1 NC_010581.1 hypothetical protein 1188212 6198847 Bind_1035 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832167.1 1187940 D 395963 CDS YP_001832168.1 182678022 6198313 1188613..1189218 1 NC_010581.1 PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase; class II aldolase/adducin family protein 1189218 6198313 Bind_1036 Beijerinckia indica subsp. indica ATCC 9039 class II aldolase/adducin family protein YP_001832168.1 1188613 D 395963 CDS YP_001832169.1 182678023 6200778 complement(1189237..1190421) 1 NC_010581.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 1190421 6200778 Bind_1037 Beijerinckia indica subsp. indica ATCC 9039 2'-deoxycytidine 5'-triphosphate deaminase YP_001832169.1 1189237 R 395963 CDS YP_001832170.1 182678024 6201851 1190599..1191825 1 NC_010581.1 KEGG: xau:Xaut_0471 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase 1191825 6201851 Bind_1038 Beijerinckia indica subsp. indica ATCC 9039 O-succinylhomoserine sulfhydrylase YP_001832170.1 1190599 D 395963 CDS YP_001832171.1 182678025 6199673 1191933..1192325 1 NC_010581.1 PFAM: ApaG domain protein; KEGG: bja:bll1101 ApaG; ApaG domain-containing protein 1192325 6199673 Bind_1039 Beijerinckia indica subsp. indica ATCC 9039 ApaG domain-containing protein YP_001832171.1 1191933 D 395963 CDS YP_001832172.1 182678026 6198842 1192367..1193545 1 NC_010581.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE); acetylornithine deacetylase ArgE 1193545 6198842 Bind_1040 Beijerinckia indica subsp. indica ATCC 9039 acetylornithine deacetylase ArgE YP_001832172.1 1192367 D 395963 CDS YP_001832173.1 182678027 6199952 complement(1193551..1195263) 1 NC_010581.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1195263 ureC 6199952 ureC Beijerinckia indica subsp. indica ATCC 9039 urease subunit alpha YP_001832173.1 1193551 R 395963 CDS YP_001832174.1 182678028 6199204 1195512..1195736 1 NC_010581.1 KEGG: rpc:RPC_0822 hypothetical protein; hypothetical protein 1195736 6199204 Bind_1042 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832174.1 1195512 D 395963 CDS YP_001832175.1 182678029 6198428 1195733..1196089 1 NC_010581.1 KEGG: rpc:RPC_0821 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 1196089 6198428 Bind_1043 Beijerinckia indica subsp. indica ATCC 9039 transcriptional modulator of MazE/toxin MazF YP_001832175.1 1195733 D 395963 CDS YP_001832176.1 182678030 6198592 1196460..1197809 1 NC_010581.1 KEGG: azc:AZC_0865 hypothetical protein; hypothetical protein 1197809 6198592 Bind_1044 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832176.1 1196460 D 395963 CDS YP_001832177.1 182678031 6199508 complement(1198569..1199471) 1 NC_010581.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 1199471 6199508 Bind_1045 Beijerinckia indica subsp. indica ATCC 9039 tRNA pseudouridine synthase B YP_001832177.1 1198569 R 395963 CDS YP_001832178.1 182678032 6198935 complement(1199514..1199939) 1 NC_010581.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1199939 rbfA 6198935 rbfA Beijerinckia indica subsp. indica ATCC 9039 ribosome-binding factor A YP_001832178.1 1199514 R 395963 CDS YP_001832179.1 182678033 6198654 complement(1200600..1203761) 1 NC_010581.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1203761 infB 6198654 infB Beijerinckia indica subsp. indica ATCC 9039 translation initiation factor IF-2 YP_001832179.1 1200600 R 395963 CDS YP_001832180.1 182678034 6198285 complement(1203940..1204683) 1 NC_010581.1 PFAM: protein of unknown function DUF448; KEGG: rpa:RPA0437 hypothetical protein; hypothetical protein 1204683 6198285 Bind_1048 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832180.1 1203940 R 395963 CDS YP_001832181.1 182678035 6198846 complement(1204755..1206371) 1 NC_010581.1 KEGG: azc:AZC_0018 transcription termination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor 1206371 6198846 Bind_1049 Beijerinckia indica subsp. indica ATCC 9039 NusA antitermination factor YP_001832181.1 1204755 R 395963 CDS YP_001832182.1 182678036 6200137 complement(1206383..1207327) 1 NC_010581.1 PFAM: protein of unknown function DUF150; KEGG: xau:Xaut_0296 protein of unknown function DUF150; hypothetical protein 1207327 6200137 Bind_1050 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832182.1 1206383 R 395963 CDS YP_001832183.1 182678037 6198302 1208115..1208678 1 NC_010581.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: rpb:RPB_0585 nitrogen-fixing NifU-like; scaffold protein Nfu/NifU 1208678 6198302 Bind_1051 Beijerinckia indica subsp. indica ATCC 9039 scaffold protein Nfu/NifU YP_001832183.1 1208115 D 395963 CDS YP_001832184.1 182678038 6200448 1208825..1209604 1 NC_010581.1 PFAM: peptidase M22 glycoprotease; KEGG: azc:AZC_4704 glycoprotease; peptidase M22 glycoprotease 1209604 6200448 Bind_1052 Beijerinckia indica subsp. indica ATCC 9039 peptidase M22 glycoprotease YP_001832184.1 1208825 D 395963 CDS YP_001832185.1 182678039 6199215 1209606..1210097 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll0798 putative acetyltransferase; N-acetyltransferase GCN5 1210097 6199215 Bind_1053 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832185.1 1209606 D 395963 CDS YP_001832186.1 182678040 6199769 1210280..1210846 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bpt:Bpet2481 bacterioferritin comigratory protein; alkyl hydroperoxide reductase 1210846 6199769 Bind_1054 Beijerinckia indica subsp. indica ATCC 9039 alkyl hydroperoxide reductase YP_001832186.1 1210280 D 395963 CDS YP_001832187.1 182678041 6198171 1211013..1212545 1 NC_010581.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1212545 6198171 Bind_1055 Beijerinckia indica subsp. indica ATCC 9039 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001832187.1 1211013 D 395963 CDS YP_001832188.1 182678042 6201139 1212596..1213621 1 NC_010581.1 PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein; PhoH family protein 1213621 6201139 Bind_1056 Beijerinckia indica subsp. indica ATCC 9039 PhoH family protein YP_001832188.1 1212596 D 395963 CDS YP_001832189.1 182678043 6200530 1213638..1214255 1 NC_010581.1 PFAM: protein of unknown function UPF0054; KEGG: mag:amb4465 predicted metal-dependent hydrolase; hypothetical protein 1214255 6200530 Bind_1057 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832189.1 1213638 D 395963 CDS YP_001832190.1 182678044 6201022 1214252..1215286 1 NC_010581.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain containing protein; hypothetical protein 1215286 6201022 Bind_1058 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832190.1 1214252 D 395963 CDS YP_001832191.1 182678045 6198208 1215300..1216952 1 NC_010581.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3208 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1216952 6198208 Bind_1059 Beijerinckia indica subsp. indica ATCC 9039 apolipoprotein N-acyltransferase YP_001832191.1 1215300 D 395963 CDS YP_001832192.1 182678046 6201799 complement(1217220..1217474) 1 NC_010581.1 hypothetical protein 1217474 6201799 Bind_1060 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832192.1 1217220 R 395963 CDS YP_001832193.1 182678047 6199135 1217584..1218051 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: azc:AZC_0013 putative transcriptional regulator; XRE family transcriptional regulator 1218051 6199135 Bind_1061 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001832193.1 1217584 D 395963 CDS YP_001832194.1 182678048 6200564 1218364..1219560 1 NC_010581.1 PFAM: S-adenosylmethionine synthetase; KEGG: azc:AZC_0014 S-adenosylmethionine synthetase; methionine adenosyltransferase 1219560 6200564 Bind_1062 Beijerinckia indica subsp. indica ATCC 9039 methionine adenosyltransferase YP_001832194.1 1218364 D 395963 CDS YP_001832195.1 182678049 6200382 1219588..1220325 1 NC_010581.1 PFAM: putative methyltransferase; KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1220325 6200382 Bind_1063 Beijerinckia indica subsp. indica ATCC 9039 tRNA (guanine-N(7)-)-methyltransferase YP_001832195.1 1219588 D 395963 CDS YP_001832196.1 182678050 6200464 1220666..1222618 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: xau:Xaut_2382 glycosyl transferase family 2; glycosyl transferase family protein 1222618 6200464 Bind_1064 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001832196.1 1220666 D 395963 CDS YP_001832197.1 182678051 6199974 1222765..1224468 1 NC_010581.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 1224468 lysK 6199974 lysK Beijerinckia indica subsp. indica ATCC 9039 lysyl-tRNA synthetase YP_001832197.1 1222765 D 395963 CDS YP_001832198.1 182678052 6199767 1224516..1225157 1 NC_010581.1 PFAM: phospholipase/Carboxylesterase; KEGG: dge:Dgeo_0941 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1225157 6199767 Bind_1066 Beijerinckia indica subsp. indica ATCC 9039 phospholipase/carboxylesterase YP_001832198.1 1224516 D 395963 CDS YP_001832199.1 182678053 6200181 1225215..1225568 1 NC_010581.1 PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 protein of unknown function DUF952; hypothetical protein 1225568 6200181 Bind_1067 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832199.1 1225215 D 395963 CDS YP_001832200.1 182678054 6199300 1225574..1226659 1 NC_010581.1 PFAM: dihydroorotate dehydrogenase; KEGG: rpc:RPC_0755 dihydroorotate dehydrogenase 2; dihydroorotate oxidase 1226659 6199300 Bind_1068 Beijerinckia indica subsp. indica ATCC 9039 dihydroorotate oxidase YP_001832200.1 1225574 D 395963 CDS YP_001832201.1 182678055 6200815 complement(1226596..1227981) 1 NC_010581.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: xau:Xaut_1467 MATE efflux family protein; MATE efflux family protein 1227981 6200815 Bind_1069 Beijerinckia indica subsp. indica ATCC 9039 MATE efflux family protein YP_001832201.1 1226596 R 395963 CDS YP_001832202.1 182678056 6201727 complement(1227971..1228300) 1 NC_010581.1 KEGG: rpd:RPD_0792 hypothetical protein; hypothetical protein 1228300 6201727 Bind_1070 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832202.1 1227971 R 395963 CDS YP_001832203.1 182678057 6199686 complement(1228328..1230052) 1 NC_010581.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: azc:AZC_0393 putative ATP dependent DNA ligase; ATP dependent DNA ligase 1230052 6199686 Bind_1071 Beijerinckia indica subsp. indica ATCC 9039 ATP dependent DNA ligase YP_001832203.1 1228328 R 395963 CDS YP_001832204.1 182678058 6201094 complement(1230049..1231083) 1 NC_010581.1 KEGG: xau:Xaut_1471 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 1231083 6201094 Bind_1072 Beijerinckia indica subsp. indica ATCC 9039 putative mRNA 3-end processing factor YP_001832204.1 1230049 R 395963 CDS YP_001832205.1 182678059 6199521 complement(1231299..1231679) 1 NC_010581.1 hypothetical protein 1231679 6199521 Bind_1073 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832205.1 1231299 R 395963 CDS YP_001832206.1 182678060 6199091 complement(1232061..1232447) 1 NC_010581.1 KEGG: gdi:GDI1327 hypothetical protein; hypothetical protein 1232447 6199091 Bind_1074 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832206.1 1232061 R 395963 CDS YP_001832207.1 182678061 6199248 1232803..1233714 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_0727 methyltransferase type 11; type 12 methyltransferase 1233714 6199248 Bind_1075 Beijerinckia indica subsp. indica ATCC 9039 type 12 methyltransferase YP_001832207.1 1232803 D 395963 CDS YP_001832208.1 182678062 6201541 1233869..1235230 1 NC_010581.1 PFAM: ABC-1 domain protein; KEGG: xau:Xaut_1153 ABC-1 domain protein; hypothetical protein 1235230 6201541 Bind_1076 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832208.1 1233869 D 395963 CDS YP_001832209.1 182678063 6199923 1235592..1237247 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1436 hypothetical cytosolic protein; hypothetical protein 1237247 6199923 Bind_1077 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832209.1 1235592 D 395963 CDS YP_001832210.1 182678064 6199223 complement(1237380..1238810) 1 NC_010581.1 PFAM: homospermidine synthase; KEGG: xau:Xaut_2138 homospermidine synthase; homospermidine synthase 1238810 6199223 Bind_1078 Beijerinckia indica subsp. indica ATCC 9039 homospermidine synthase YP_001832210.1 1237380 R 395963 CDS YP_001832211.1 182678065 6198684 complement(1239006..1239695) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7760 hypothetical protein; N-acetyltransferase GCN5 1239695 6198684 Bind_1079 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832211.1 1239006 R 395963 CDS YP_001832212.1 182678066 6200219 complement(1239883..1241013) 1 NC_010581.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: azc:AZC_0333 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 1241013 6200219 Bind_1080 Beijerinckia indica subsp. indica ATCC 9039 Orn/DAP/Arg decarboxylase 2 YP_001832212.1 1239883 R 395963 CDS YP_001832213.1 182678067 6199087 1242373..1243974 1 NC_010581.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1243974 mdoG 6199087 mdoG Beijerinckia indica subsp. indica ATCC 9039 glucan biosynthesis protein G YP_001832213.1 1242373 D 395963 CDS YP_001832214.1 182678068 6199878 1244001..1244441 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mes:Meso_0956 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1244441 6199878 Bind_1082 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832214.1 1244001 D 395963 CDS YP_001832215.1 182678069 6199385 complement(1244453..1245271) 1 NC_010581.1 PFAM: Creatininase; KEGG: mex:Mext_2133 creatininase; creatininase 1245271 6199385 Bind_1083 Beijerinckia indica subsp. indica ATCC 9039 creatininase YP_001832215.1 1244453 R 395963 CDS YP_001832216.1 182678070 6200994 complement(1245615..1246433) 1 NC_010581.1 hypothetical protein 1246433 6200994 Bind_1085 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832216.1 1245615 R 395963 CDS YP_001832217.1 182678071 6201753 complement(1246770..1247972) 1 NC_010581.1 PFAM: low temperature requirement A; KEGG: oan:Oant_2126 low temperature requirement A; low temperature requirement A 1247972 6201753 Bind_1086 Beijerinckia indica subsp. indica ATCC 9039 low temperature requirement A YP_001832217.1 1246770 R 395963 CDS YP_001832218.1 182678072 6200492 complement(1247987..1248253) 1 NC_010581.1 KEGG: pap:PSPA7_2235 hypothetical protein; hypothetical protein 1248253 6200492 Bind_1087 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832218.1 1247987 R 395963 CDS YP_001832219.1 182678073 6200874 complement(1248459..1248941) 1 NC_010581.1 KEGG: bxe:Bxe_B1808 hypothetical protein; hypothetical protein 1248941 6200874 Bind_1088 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832219.1 1248459 R 395963 CDS YP_001832220.1 182678074 6200833 1249382..1250440 1 NC_010581.1 PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_7482 putative ABC transporter, periplasmic binding protein; NMT1/THI5-like domain-containing protein 1250440 6200833 Bind_1089 Beijerinckia indica subsp. indica ATCC 9039 NMT1/THI5-like domain-containing protein YP_001832220.1 1249382 D 395963 CDS YP_001832221.1 182678075 6198250 1250437..1251222 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_3870 ABC transporter related; ABC transporter-like protein 1251222 6198250 Bind_1090 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832221.1 1250437 D 395963 CDS YP_001832222.1 182678076 6198889 1251219..1252007 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0333 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1252007 6198889 Bind_1091 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001832222.1 1251219 D 395963 CDS YP_001832223.1 182678077 6201748 1252168..1253136 1 NC_010581.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: azc:AZC_4207 putative glycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1253136 6201748 Bind_1092 Beijerinckia indica subsp. indica ATCC 9039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001832223.1 1252168 D 395963 CDS YP_001832224.1 182678078 6200933 1253491..1254405 1 NC_010581.1 KEGG: mex:Mext_4353 hypothetical protein; hypothetical protein 1254405 6200933 Bind_1093 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832224.1 1253491 D 395963 CDS YP_001832225.1 182678079 6200102 complement(1254419..1254898) 1 NC_010581.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: azc:AZC_0511 regulatory protein; MerR family transcriptional regulator 1254898 6200102 Bind_1094 Beijerinckia indica subsp. indica ATCC 9039 MerR family transcriptional regulator YP_001832225.1 1254419 R 395963 CDS YP_001832226.1 182678080 6199922 1255217..1258228 1 NC_010581.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0814 hypothetical protein; Sel1 domain-containing protein 1258228 6199922 Bind_1095 Beijerinckia indica subsp. indica ATCC 9039 Sel1 domain-containing protein YP_001832226.1 1255217 D 395963 CDS YP_001832227.1 182678081 6198352 1258844..1260550 1 NC_010581.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1260550 6198352 Bind_1096 Beijerinckia indica subsp. indica ATCC 9039 potassium-transporting ATPase subunit A YP_001832227.1 1258844 D 395963 CDS YP_001832228.1 182678082 6201270 1260572..1262617 1 NC_010581.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1262617 6201270 Bind_1097 Beijerinckia indica subsp. indica ATCC 9039 potassium-transporting ATPase subunit B YP_001832228.1 1260572 D 395963 CDS YP_001832229.1 182678083 6198665 1262630..1263223 1 NC_010581.1 KEGG: ccr:CC_1593 potassium-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 1263223 6198665 Bind_1098 Beijerinckia indica subsp. indica ATCC 9039 potassium-transporting ATPase subunit C YP_001832229.1 1262630 D 395963 CDS YP_001832230.1 182678084 6199837 1263220..1265910 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; KEGG: cak:Caul_2695 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 1265910 6199837 Bind_1099 Beijerinckia indica subsp. indica ATCC 9039 osmosensitive K+ channel signal transduction histidine kinase YP_001832230.1 1263220 D 395963 CDS YP_001832231.1 182678085 6200252 1265907..1266599 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cak:Caul_2694 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1266599 6200252 Bind_1100 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001832231.1 1265907 D 395963 CDS YP_001832232.1 182678086 6201775 1266777..1267706 1 NC_010581.1 KEGG: xom:XOO_3233 hypothetical protein; hypothetical protein 1267706 6201775 Bind_1101 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832232.1 1266777 D 395963 CDS YP_001832233.1 182678087 6200687 complement(1267875..1271912) 1 NC_010581.1 TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase; non-ribosomal peptide synthetase 1271912 6200687 Bind_1102 Beijerinckia indica subsp. indica ATCC 9039 non-ribosomal peptide synthetase YP_001832233.1 1267875 R 395963 CDS YP_001832234.1 182678088 6199331 complement(1272251..1273099) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2151 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 1273099 6199331 Bind_1103 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832234.1 1272251 R 395963 CDS YP_001832235.1 182678089 6200783 1273365..1273904 1 NC_010581.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_0228 RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 1273904 6200783 Bind_1104 Beijerinckia indica subsp. indica ATCC 9039 ECF subfamily RNA polymerase sigma-24 factor YP_001832235.1 1273365 D 395963 CDS YP_001832236.1 182678090 6199679 1273925..1274776 1 NC_010581.1 KEGG: bbr:BB1303 hypothetical protein; putative transmembrane anti-sigma factor 1274776 6199679 Bind_1105 Beijerinckia indica subsp. indica ATCC 9039 putative transmembrane anti-sigma factor YP_001832236.1 1273925 D 395963 CDS YP_001832237.1 182678091 6201735 complement(1274868..1275839) 1 NC_010581.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bra:BRADO2148 putative heat shock protein DnaJ; chaperone DnaJ domain-containing protein 1275839 6201735 Bind_1106 Beijerinckia indica subsp. indica ATCC 9039 chaperone DnaJ domain-containing protein YP_001832237.1 1274868 R 395963 CDS YP_001832238.1 182678092 6200124 complement(1275992..1276651) 1 NC_010581.1 KEGG: mex:Mext_4294 hypothetical protein; hypothetical protein 1276651 6200124 Bind_1107 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832238.1 1275992 R 395963 CDS YP_001832239.1 182678093 6198659 1276738..1277364 1 NC_010581.1 KEGG: bcs:BCAN_A0421 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 1277364 6198659 Bind_1108 Beijerinckia indica subsp. indica ATCC 9039 pyridoxamine 5'-phosphate oxidase YP_001832239.1 1276738 D 395963 CDS YP_001832240.1 182678094 6198353 complement(1277621..1279624) 1 NC_010581.1 hypothetical protein 1279624 6198353 Bind_1109 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832240.1 1277621 R 395963 CDS YP_001832241.1 182678095 6201836 1279813..1280082 1 NC_010581.1 hypothetical protein 1280082 6201836 Bind_1110 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832241.1 1279813 D 395963 CDS YP_001832242.1 182678096 6199704 complement(1280537..1281889) 1 NC_010581.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 1281889 6199704 Bind_1111 Beijerinckia indica subsp. indica ATCC 9039 8-amino-7-oxononanoate synthase YP_001832242.1 1280537 R 395963 CDS YP_001832243.1 182678097 6200271 complement(1282168..1282488) 1 NC_010581.1 hypothetical protein 1282488 6200271 Bind_1112 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832243.1 1282168 R 395963 CDS YP_001832244.1 182678098 6200022 complement(1282451..1289929) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase; Beta-ketoacyl synthase 1289929 6200022 Bind_1113 Beijerinckia indica subsp. indica ATCC 9039 Beta-ketoacyl synthase YP_001832244.1 1282451 R 395963 CDS YP_001832245.1 182678099 6198180 complement(1290116..1290247) 1 NC_010581.1 hypothetical protein 1290247 6198180 Bind_1114 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832245.1 1290116 R 395963 CDS YP_001832246.1 182678100 6199690 complement(1290795..1291439) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO1844 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 1291439 6199690 Bind_1115 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001832246.1 1290795 R 395963 CDS YP_001832247.1 182678101 6201435 complement(1291516..1293594) 1 NC_010581.1 KEGG: gsu:GSU0709 hypothetical protein; hypothetical protein 1293594 6201435 Bind_1116 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832247.1 1291516 R 395963 CDS YP_001832248.1 182678102 6200322 1293981..1295633 1 NC_010581.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1295633 6200322 Bind_1117 Beijerinckia indica subsp. indica ATCC 9039 putative ABC transporter ATP-binding protein YP_001832248.1 1293981 D 395963 CDS YP_001832249.1 182678103 6201023 complement(1295710..1296579) 1 NC_010581.1 PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: ret:RHE_PF00140 hypothetical protein; hypothetical protein 1296579 6201023 Bind_1118 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832249.1 1295710 R 395963 CDS YP_001832250.1 182678104 6198487 complement(1296576..1297151) 1 NC_010581.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: aba:Acid345_4416 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 1297151 6198487 Bind_1119 Beijerinckia indica subsp. indica ATCC 9039 uracil-DNA glycosylase superfamily protein YP_001832250.1 1296576 R 395963 CDS YP_001832251.1 182678105 6198227 complement(1297291..1297680) 1 NC_010581.1 KEGG: nha:Nham_3496 hypothetical protein; hypothetical protein 1297680 6198227 Bind_1120 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832251.1 1297291 R 395963 CDS YP_001832252.1 182678106 6200694 1298118..1299140 1 NC_010581.1 PFAM: O-methyltransferase family 2; regulatory protein ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_4339 regulatory protein; ArsR family transcriptional regulator 1299140 6200694 Bind_1121 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001832252.1 1298118 D 395963 CDS YP_001832253.1 182678107 6201165 1299137..1300066 1 NC_010581.1 KEGG: xau:Xaut_2831 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1300066 6201165 Bind_1122 Beijerinckia indica subsp. indica ATCC 9039 5,10-methylenetetrahydrofolate reductase YP_001832253.1 1299137 D 395963 CDS YP_001832254.1 182678108 6198600 1300067..1303807 1 NC_010581.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 1303807 metH 6198600 metH Beijerinckia indica subsp. indica ATCC 9039 B12-dependent methionine synthase YP_001832254.1 1300067 D 395963 CDS YP_001832255.1 182678109 6199347 1303813..1304235 1 NC_010581.1 PFAM: protein of unknown function UPF0047; KEGG: bmu:Bmul_5223 protein of unknown function UPF0047; hypothetical protein 1304235 6199347 Bind_1124 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832255.1 1303813 D 395963 CDS YP_001832256.1 182678110 6198469 complement(1304280..1305863) 1 NC_010581.1 KEGG: hau:Haur_0109 hypothetical protein; hypothetical protein 1305863 6198469 Bind_1125 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832256.1 1304280 R 395963 CDS YP_001832257.1 182678111 6200913 1306106..1306897 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B4504 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1306897 6200913 Bind_1126 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832257.1 1306106 D 395963 CDS YP_001832258.1 182678112 6198792 complement(1306947..1307198) 1 NC_010581.1 KEGG: xau:Xaut_0133 hypothetical protein; hypothetical protein 1307198 6198792 Bind_1127 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832258.1 1306947 R 395963 CDS YP_001832259.1 182678113 6198335 complement(1307573..1307920) 1 NC_010581.1 KEGG: xau:Xaut_2099 hypothetical protein; hypothetical protein 1307920 6198335 Bind_1128 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832259.1 1307573 R 395963 CDS YP_001832260.1 182678114 6201000 complement(1308007..1308585) 1 NC_010581.1 KEGG: azo:azo2957 hypothetical protein; hypothetical protein 1308585 6201000 Bind_1129 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832260.1 1308007 R 395963 CDS YP_001832261.1 182678115 6199202 1308751..1309491 1 NC_010581.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain; molybdopterin binding domain-containing protein 1309491 6199202 Bind_1130 Beijerinckia indica subsp. indica ATCC 9039 molybdopterin binding domain-containing protein YP_001832261.1 1308751 D 395963 CDS YP_001832262.1 182678116 6199831 1309502..1309981 1 NC_010581.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1309981 6199831 Bind_1131 Beijerinckia indica subsp. indica ATCC 9039 xanthine-guanine phosphoribosyltransferase YP_001832262.1 1309502 D 395963 CDS YP_001832263.1 182678117 6201301 complement(1310683..1311099) 1 NC_010581.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 1311099 6201301 Bind_1132 Beijerinckia indica subsp. indica ATCC 9039 TraR/DksA family transcriptional regulator YP_001832263.1 1310683 R 395963 CDS YP_001832264.1 182678118 6200511 complement(1311305..1312522) 1 NC_010581.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1312522 6200511 Bind_1133 Beijerinckia indica subsp. indica ATCC 9039 isocitrate dehydrogenase YP_001832264.1 1311305 R 395963 CDS YP_001832265.1 182678119 6201144 complement(1312893..1313654) 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3024 metallophosphoesterase; metallophosphoesterase 1313654 6201144 Bind_1134 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001832265.1 1312893 R 395963 CDS YP_001832266.1 182678120 6200884 complement(1314275..1316512) 1 NC_010581.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO7056 putative exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1316512 6200884 Bind_1135 Beijerinckia indica subsp. indica ATCC 9039 lipopolysaccharide biosynthesis protein YP_001832266.1 1314275 R 395963 CDS YP_001832267.1 182678121 6201800 complement(1316769..1317665) 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_3105 methyltransferase type 11; type 11 methyltransferase 1317665 6201800 Bind_1136 Beijerinckia indica subsp. indica ATCC 9039 type 11 methyltransferase YP_001832267.1 1316769 R 395963 CDS YP_001832268.1 182678122 6200723 1317969..1319399 1 NC_010581.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: zmo:ZMO0113 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 1319399 6200723 Bind_1137 Beijerinckia indica subsp. indica ATCC 9039 para-aminobenzoate synthase subunit I YP_001832268.1 1317969 D 395963 CDS YP_001832269.1 182678123 6201049 1319396..1319992 1 NC_010581.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 1319992 6201049 Bind_1138 Beijerinckia indica subsp. indica ATCC 9039 glutamine amidotransferase of anthranilate synthase YP_001832269.1 1319396 D 395963 CDS YP_001832270.1 182678124 6198330 1319973..1320839 1 NC_010581.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV; class IV aminotransferase 1320839 6198330 Bind_1139 Beijerinckia indica subsp. indica ATCC 9039 class IV aminotransferase YP_001832270.1 1319973 D 395963 CDS YP_001832271.1 182678125 6200340 1320843..1321637 1 NC_010581.1 PFAM: phosphoribosyltransferase; KEGG: nwi:Nwi_0385 phosphoribosyltransferase; phosphoribosyltransferase 1321637 6200340 Bind_1140 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosyltransferase YP_001832271.1 1320843 D 395963 CDS YP_001832272.1 182678126 6199552 complement(1321765..1322427) 1 NC_010581.1 KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 1322427 6199552 Bind_1141 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacid CoA-transferase subunit B YP_001832272.1 1321765 R 395963 CDS YP_001832273.1 182678127 6199495 complement(1322442..1323149) 1 NC_010581.1 KEGG: rpa:RPA4156 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 1323149 6199495 Bind_1142 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacid CoA-transferase subunit A YP_001832273.1 1322442 R 395963 CDS YP_001832274.1 182678128 6201231 complement(1323311..1323661) 1 NC_010581.1 hypothetical protein 1323661 6201231 Bind_1143 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832274.1 1323311 R 395963 CDS YP_001832275.1 182678129 6200499 1323900..1324901 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A1400 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 1324901 6200499 Bind_1144 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001832275.1 1323900 D 395963 CDS YP_001832276.1 182678130 6200136 1325220..1326593 1 NC_010581.1 KEGG: azc:AZC_0594 HupT protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1326593 6200136 Bind_1145 Beijerinckia indica subsp. indica ATCC 9039 PAS/PAC sensor signal transduction histidine kinase YP_001832276.1 1325220 D 395963 CDS YP_001832277.1 182678131 6200379 1326787..1327788 1 NC_010581.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: xau:Xaut_0343 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1327788 6200379 Bind_1146 Beijerinckia indica subsp. indica ATCC 9039 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001832277.1 1326787 D 395963 CDS YP_001832278.1 182678132 6200253 1327796..1329262 1 NC_010581.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: azc:AZC_0596 HupV protein; nickel-dependent hydrogenase large subunit 1329262 6200253 Bind_1147 Beijerinckia indica subsp. indica ATCC 9039 nickel-dependent hydrogenase large subunit YP_001832278.1 1327796 D 395963 CDS YP_001832279.1 182678133 6200487 1329272..1331611 1 NC_010581.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: azc:AZC_0597 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF 1331611 6200487 Bind_1148 Beijerinckia indica subsp. indica ATCC 9039 (NiFe) hydrogenase maturation protein HypF YP_001832279.1 1329272 D 395963 CDS YP_001832280.1 182678134 6200221 complement(1331636..1332763) 1 NC_010581.1 KEGG: net:Neut_1100 hypothetical protein; hypothetical protein 1332763 6200221 Bind_1149 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832280.1 1331636 R 395963 CDS YP_001832281.1 182678135 6201680 1333335..1334411 1 NC_010581.1 KEGG: azc:AZC_0598 Ni-Fe hydrogenase small subunit protein; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 1334411 6201680 Bind_1150 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase (NiFe) small subunit HydA YP_001832281.1 1333335 D 395963 CDS YP_001832282.1 182678136 6198504 1334411..1336228 1 NC_010581.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: azc:AZC_0599 hydrogenase large subunit protein; nickel-dependent hydrogenase large subunit 1336228 6198504 Bind_1151 Beijerinckia indica subsp. indica ATCC 9039 nickel-dependent hydrogenase large subunit YP_001832282.1 1334411 D 395963 CDS YP_001832283.1 182678137 6201683 1336239..1337003 1 NC_010581.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: azc:AZC_0600 HupC protein; Ni/Fe-hydrogenase, b-type cytochrome subunit 1337003 6201683 Bind_1152 Beijerinckia indica subsp. indica ATCC 9039 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001832283.1 1336239 D 395963 CDS YP_001832284.1 182678138 6200398 1337225..1337881 1 NC_010581.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: azc:AZC_0601 hydrogen uptake protein; hydrogenase expression/formation protein 1337881 6200398 Bind_1153 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase expression/formation protein YP_001832284.1 1337225 D 395963 CDS YP_001832285.1 182678139 6201041 1337888..1338226 1 NC_010581.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: xau:Xaut_2177 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1338226 6201041 Bind_1154 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase assembly chaperone HypC/HupF YP_001832285.1 1337888 D 395963 CDS YP_001832286.1 182678140 6200218 1338226..1338621 1 NC_010581.1 PFAM: hydrogenase-1 expression HyaE; KEGG: azc:AZC_0603 hydrogenase expression/formation protein; hydrogenase-1 expression HyaE 1338621 6200218 Bind_1155 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase-1 expression HyaE YP_001832286.1 1338226 D 395963 CDS YP_001832287.1 182678141 6200796 1338631..1339518 1 NC_010581.1 PFAM: HupH hydrogenase expression protein; KEGG: xau:Xaut_2179 HupH hydrogenase expression protein; HupH hydrogenase expression protein 1339518 6200796 Bind_1156 Beijerinckia indica subsp. indica ATCC 9039 HupH hydrogenase expression protein YP_001832287.1 1338631 D 395963 CDS YP_001832288.1 182678142 6201128 1339515..1340402 1 NC_010581.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: xau:Xaut_2180 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1340402 6201128 Bind_1157 Beijerinckia indica subsp. indica ATCC 9039 rubredoxin-type Fe(Cys)4 protein YP_001832288.1 1339515 D 395963 CDS YP_001832289.1 182678143 6201332 1340399..1341388 1 NC_010581.1 KEGG: xau:Xaut_2181 putative hydrogenase expression/formation protein HupK; putative hydrogenase expression/formation protein HupK 1341388 6201332 Bind_1158 Beijerinckia indica subsp. indica ATCC 9039 putative hydrogenase expression/formation protein HupK YP_001832289.1 1340399 D 395963 CDS YP_001832290.1 182678144 6201294 1341394..1341735 1 NC_010581.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: xau:Xaut_2182 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1341735 6201294 Bind_1159 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase nickel incorporation protein HypA YP_001832290.1 1341394 D 395963 CDS YP_001832291.1 182678145 6201686 1341735..1342676 1 NC_010581.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: azc:AZC_0608 hydrogenase accessory protein; hydrogenase nickel incorporation protein HypB 1342676 6201686 Bind_1160 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase nickel incorporation protein HypB YP_001832291.1 1341735 D 395963 CDS YP_001832292.1 182678146 6199884 1342683..1344173 1 NC_010581.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: xau:Xaut_2184 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 1344173 6199884 Bind_1161 Beijerinckia indica subsp. indica ATCC 9039 two component, sigma54 specific, Fis family transcriptional regulator YP_001832292.1 1342683 D 395963 CDS YP_001832293.1 182678147 6199949 1344185..1344499 1 NC_010581.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: azc:AZC_0610 hydrogenase expression/formation protein; hydrogenase assembly chaperone HypC/HupF 1344499 6199949 Bind_1162 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase assembly chaperone HypC/HupF YP_001832293.1 1344185 D 395963 CDS YP_001832294.1 182678148 6201855 1344508..1345629 1 NC_010581.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: azc:AZC_0611 hydrogenase formation protein; hydrogenase expression/formation protein HypD 1345629 6201855 Bind_1163 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase expression/formation protein HypD YP_001832294.1 1344508 D 395963 CDS YP_001832295.1 182678149 6199231 1345626..1346684 1 NC_010581.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: azc:AZC_0612 hydrogenase expression/formation protein; hydrogenase expression/formation protein HypE 1346684 6199231 Bind_1164 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase expression/formation protein HypE YP_001832295.1 1345626 D 395963 CDS YP_001832296.1 182678150 6201131 complement(1346756..1347862) 1 NC_010581.1 PFAM: phosphoesterase; KEGG: aba:Acid345_1521 phosphoesterase; phosphoesterase 1347862 6201131 Bind_1165 Beijerinckia indica subsp. indica ATCC 9039 phosphoesterase YP_001832296.1 1346756 R 395963 CDS YP_001832297.1 182678151 6198133 complement(1347999..1350296) 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: zmo:ZMO1807 TonB-dependent receptor; TonB-dependent receptor 1350296 6198133 Bind_1166 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001832297.1 1347999 R 395963 CDS YP_001832298.1 182678152 6199556 1350539..1351606 1 NC_010581.1 KEGG: nha:Nham_1869 hypothetical protein; hypothetical protein 1351606 6199556 Bind_1167 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832298.1 1350539 D 395963 CDS YP_001832299.1 182678153 6200314 complement(1351669..1354785) 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; acriflavin resistance protein 1354785 6200314 Bind_1168 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001832299.1 1351669 R 395963 CDS YP_001832300.1 182678154 6200210 complement(1354839..1356008) 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xau:Xaut_1596 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1356008 6200210 Bind_1169 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001832300.1 1354839 R 395963 CDS YP_001832301.1 182678155 6198709 complement(1356309..1356995) 1 NC_010581.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mca:MCA0263 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1356995 6198709 Bind_1170 Beijerinckia indica subsp. indica ATCC 9039 fumarylacetoacetate (FAA) hydrolase YP_001832301.1 1356309 R 395963 CDS YP_001832302.1 182678156 6200980 complement(1357110..1357451) 1 NC_010581.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: oan:Oant_0542 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 1357451 6200980 Bind_1171 Beijerinckia indica subsp. indica ATCC 9039 exodeoxyribonuclease VII small subunit YP_001832302.1 1357110 R 395963 CDS YP_001832303.1 182678157 6200968 1357518..1358873 1 NC_010581.1 KEGG: cak:Caul_5093 monooxygenase, NtaA/SnaA/SoxA family; NtaA/SnaA/SoxA family monooxygenase 1358873 6200968 Bind_1172 Beijerinckia indica subsp. indica ATCC 9039 NtaA/SnaA/SoxA family monooxygenase YP_001832303.1 1357518 D 395963 CDS YP_001832304.1 182678158 6200177 complement(1358906..1359439) 1 NC_010581.1 KEGG: mex:Mext_4307 hypothetical protein; hypothetical protein 1359439 6200177 Bind_1173 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832304.1 1358906 R 395963 CDS YP_001832305.1 182678159 6201333 complement(1359681..1360352) 1 NC_010581.1 KEGG: ajs:Ajs_4230 metal dependent phosphohydrolase, HD region; metal dependent phosphohydrolase, HD region 1360352 6201333 Bind_1174 Beijerinckia indica subsp. indica ATCC 9039 metal dependent phosphohydrolase, HD region YP_001832305.1 1359681 R 395963 CDS YP_001832306.1 182678160 6199246 1360846..1362570 1 NC_010581.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mca:MCA0262 ATPase, AAA family; ATPase central domain-containing protein 1362570 6199246 Bind_1175 Beijerinckia indica subsp. indica ATCC 9039 ATPase central domain-containing protein YP_001832306.1 1360846 D 395963 CDS YP_001832307.1 182678161 6200563 complement(1362656..1363279) 1 NC_010581.1 KEGG: pla:Plav_0747 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1363279 6200563 Bind_1176 Beijerinckia indica subsp. indica ATCC 9039 DNA-3-methyladenine glycosylase I YP_001832307.1 1362656 R 395963 CDS YP_001832308.1 182678162 6199825 complement(1363316..1364515) 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gur:Gura_0984 major facilitator superfamily MFS_1; major facilitator transporter 1364515 6199825 Bind_1177 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832308.1 1363316 R 395963 CDS YP_001832309.1 182678163 6200088 1364669..1366186 1 NC_010581.1 PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: rle:pRL110232 putative transmembrane cyclic nucleotide-binding ion channel; cyclic nucleotide-regulated small mechanosensitive ion channel 1366186 6200088 Bind_1178 Beijerinckia indica subsp. indica ATCC 9039 cyclic nucleotide-regulated small mechanosensitive ion channel YP_001832309.1 1364669 D 395963 CDS YP_001832310.1 182678164 6201138 complement(1366208..1366873) 1 NC_010581.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rpc:RPC_0206 heme exporter protein CcmB; heme exporter protein CcmB 1366873 6201138 Bind_1179 Beijerinckia indica subsp. indica ATCC 9039 heme exporter protein CcmB YP_001832310.1 1366208 R 395963 CDS YP_001832311.1 182678165 6198389 complement(1366894..1367511) 1 NC_010581.1 KEGG: rpa:RPA0203 heme exporter protein A (heme ABC transporter ATP-binding protein), cytochrome c biogenesis; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 1367511 6198389 Bind_1180 Beijerinckia indica subsp. indica ATCC 9039 heme exporter protein CcmA YP_001832311.1 1366894 R 395963 CDS YP_001832312.1 182678166 6200326 1367750..1370479 1 NC_010581.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1370479 6200326 Bind_1181 Beijerinckia indica subsp. indica ATCC 9039 aconitate hydratase YP_001832312.1 1367750 D 395963 CDS YP_001832313.1 182678167 6201168 1370623..1371732 1 NC_010581.1 KEGG: bbt:BBta_0340 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1371732 6201168 Bind_1182 Beijerinckia indica subsp. indica ATCC 9039 3-isopropylmalate dehydrogenase YP_001832313.1 1370623 D 395963 CDS YP_001832314.1 182678168 6198217 1371964..1374237 1 NC_010581.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor; TonB-dependent siderophore receptor 1374237 6198217 Bind_1183 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent siderophore receptor YP_001832314.1 1371964 D 395963 CDS YP_001832315.1 182678169 6200477 complement(1374333..1374773) 1 NC_010581.1 hypothetical protein 1374773 6200477 Bind_1184 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832315.1 1374333 R 395963 CDS YP_001832316.1 182678170 6199712 complement(1375247..1375489) 1 NC_010581.1 KEGG: bpm:BURPS1710b_A1082 200 kDa antigen p200, putative; hypothetical protein 1375489 6199712 Bind_1185 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832316.1 1375247 R 395963 CDS YP_001832317.1 182678171 6199338 1376088..1377122 1 NC_010581.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: rpc:RPC_0237 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1377122 6199338 Bind_1186 Beijerinckia indica subsp. indica ATCC 9039 aspartate-semialdehyde dehydrogenase YP_001832317.1 1376088 D 395963 CDS YP_001832318.1 182678172 6200486 complement(1377232..1377960) 1 NC_010581.1 PFAM: carbonic anhydrase; KEGG: azc:AZC_2766 carbonic anhydrase; carbonate dehydratase 1377960 6200486 Bind_1187 Beijerinckia indica subsp. indica ATCC 9039 carbonate dehydratase YP_001832318.1 1377232 R 395963 CDS YP_001832319.1 182678173 6200632 1378082..1378960 1 NC_010581.1 PFAM: HpcH/HpaI aldolase; KEGG: azc:AZC_3736 citrate lyase beta subunit; citryl-CoA lyase 1378960 6200632 Bind_1188 Beijerinckia indica subsp. indica ATCC 9039 citryl-CoA lyase YP_001832319.1 1378082 D 395963 CDS YP_001832320.1 182678174 6200390 1379427..1380761 1 NC_010581.1 KEGG: rpd:RPD_0468 hypothetical protein; hypothetical protein 1380761 6200390 Bind_1189 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832320.1 1379427 D 395963 CDS YP_001832321.1 182678175 6198500 1380899..1382380 1 NC_010581.1 PFAM: HemY domain protein; KEGG: mex:Mext_0735 HemY domain protein; HemY domain-containing protein 1382380 6198500 Bind_1190 Beijerinckia indica subsp. indica ATCC 9039 HemY domain-containing protein YP_001832321.1 1380899 D 395963 CDS YP_001832322.1 182678176 6199751 1382660..1383157 1 NC_010581.1 KEGG: rru:Rru_A2704 hypothetical protein; hypothetical protein 1383157 6199751 Bind_1191 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832322.1 1382660 D 395963 CDS YP_001832323.1 182678177 6200567 complement(1383306..1384718) 1 NC_010581.1 KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1384718 6200567 Bind_1192 Beijerinckia indica subsp. indica ATCC 9039 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001832323.1 1383306 R 395963 CDS YP_001832324.1 182678178 6199862 complement(1385045..1386622) 1 NC_010581.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3; peptide chain release factor 3 1386622 6199862 Bind_1193 Beijerinckia indica subsp. indica ATCC 9039 peptide chain release factor 3 YP_001832324.1 1385045 R 395963 CDS YP_001832325.1 182678179 6200132 1386867..1387703 1 NC_010581.1 KEGG: mlo:mll1046 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1387703 6200132 Bind_1194 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c oxidase subunit I YP_001832325.1 1386867 D 395963 CDS YP_001832326.1 182678180 6198493 complement(1387795..1389267) 1 NC_010581.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: shn:Shewana3_3225 peptidase S10, serine carboxypeptidase; peptidase S10 serine carboxypeptidase 1389267 6198493 Bind_1195 Beijerinckia indica subsp. indica ATCC 9039 peptidase S10 serine carboxypeptidase YP_001832326.1 1387795 R 395963 CDS YP_001832327.1 182678181 6200291 1389991..1391370 1 NC_010581.1 PFAM: OmpA/MotB domain protein; transport-associated; KEGG: bbt:BBta_0753 putative outer membrane protein with OmpA domain; OmpA/MotB domain-containing protein 1391370 6200291 Bind_1196 Beijerinckia indica subsp. indica ATCC 9039 OmpA/MotB domain-containing protein YP_001832327.1 1389991 D 395963 CDS YP_001832328.1 182678182 6201854 1391382..1392011 1 NC_010581.1 KEGG: bra:BRADO2721 hypothetical protein; putative membrane protein; putative TolA family protein; hypothetical protein 1392011 6201854 Bind_1197 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832328.1 1391382 D 395963 CDS YP_001832329.1 182678183 6200739 complement(1392221..1393204) 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: sil:SPOA0345 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 1393204 6200739 Bind_1198 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001832329.1 1392221 R 395963 CDS YP_001832330.1 182678184 6200000 1393267..1394208 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sil:SPOA0344 transcriptional regulator, LysR family; LysR family transcriptional regulator 1394208 6200000 Bind_1199 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832330.1 1393267 D 395963 CDS YP_001832331.1 182678185 6199897 complement(1394276..1394743) 1 NC_010581.1 hypothetical protein 1394743 6199897 Bind_1200 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832331.1 1394276 R 395963 CDS YP_001832332.1 182678186 6199866 complement(1394861..1396498) 1 NC_010581.1 PFAM: Pyrrolo-quinoline quinone; KEGG: dge:Dgeo_1149 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 1396498 6199866 Bind_1201 Beijerinckia indica subsp. indica ATCC 9039 Pyrrolo-quinoline quinone YP_001832332.1 1394861 R 395963 CDS YP_001832333.1 182678187 6201771 complement(1396569..1397696) 1 NC_010581.1 PFAM: Patatin; KEGG: rru:Rru_A1038 patatin; patatin 1397696 6201771 Bind_1202 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001832333.1 1396569 R 395963 CDS YP_001832334.1 182678188 6200423 complement(1398228..1398458) 1 NC_010581.1 PFAM: protein of unknown function DUF378; KEGG: rsq:Rsph17025_0607 protein of unknown function DUF378; hypothetical protein 1398458 6200423 Bind_1203 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832334.1 1398228 R 395963 CDS YP_001832335.1 182678189 6201581 complement(1398736..1399509) 1 NC_010581.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1399509 6201581 Bind_1204 Beijerinckia indica subsp. indica ATCC 9039 arginyl-tRNA-protein transferase YP_001832335.1 1398736 R 395963 CDS YP_001832336.1 182678190 6200422 complement(1399768..1400250) 1 NC_010581.1 PFAM: RDD domain containing protein; KEGG: sme:SMc01765 hypothetical protein; RDD domain-containing protein 1400250 6200422 Bind_1205 Beijerinckia indica subsp. indica ATCC 9039 RDD domain-containing protein YP_001832336.1 1399768 R 395963 CDS YP_001832337.1 182678191 6199927 1400426..1401109 1 NC_010581.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mex:Mext_0840 peptidase M15D VanX D-ala-D-ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 1401109 6199927 Bind_1206 Beijerinckia indica subsp. indica ATCC 9039 peptidase M15D vanX D-ala-D-ala dipeptidase YP_001832337.1 1400426 D 395963 CDS YP_001832338.1 182678192 6198646 complement(1401114..1402670) 1 NC_010581.1 KEGG: rrs:RoseRS_3992 hypothetical protein; hypothetical protein 1402670 6198646 Bind_1207 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832338.1 1401114 R 395963 CDS YP_001832339.1 182678193 6201348 complement(1402812..1403879) 1 NC_010581.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1403879 6201348 Bind_1208 Beijerinckia indica subsp. indica ATCC 9039 delta-aminolevulinic acid dehydratase YP_001832339.1 1402812 R 395963 CDS YP_001832340.1 182678194 6198134 complement(1404033..1404749) 1 NC_010581.1 PFAM: TENA/THI-4 domain protein; KEGG: gdi:GDI2186 thiaminase-2 protein; TenA family transcription regulator 1404749 6198134 Bind_1209 Beijerinckia indica subsp. indica ATCC 9039 TenA family transcription regulator YP_001832340.1 1404033 R 395963 CDS YP_001832341.1 182678195 6198284 1405185..1406156 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: syn:slr0605 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 1406156 6198284 Bind_1210 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001832341.1 1405185 D 395963 CDS YP_001832342.1 182678196 6198383 complement(1406168..1406476) 1 NC_010581.1 KEGG: rpc:RPC_3310 hypothetical protein; hypothetical protein 1406476 6198383 Bind_1211 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832342.1 1406168 R 395963 CDS YP_001832343.1 182678197 6198167 1406632..1407003 1 NC_010581.1 PFAM: response regulator receiver; KEGG: mex:Mext_0966 response regulator receiver; response regulator receiver protein 1407003 6198167 Bind_1212 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001832343.1 1406632 D 395963 CDS YP_001832344.1 182678198 6200075 1407058..1408431 1 NC_010581.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rpa:RPA3132 response regulator PleD; response regulator receiver modulated diguanylate cyclase 1408431 6200075 Bind_1213 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver modulated diguanylate cyclase YP_001832344.1 1407058 D 395963 CDS YP_001832345.1 182678199 6200885 complement(1408852..1410159) 1 NC_010581.1 PFAM: beta-lactamase; KEGG: bra:BRADO1130 putative penicillin binding protein; beta-lactamase 1410159 6200885 Bind_1214 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase YP_001832345.1 1408852 R 395963 CDS YP_001832346.1 182678200 6200395 complement(1410192..1412267) 1 NC_010581.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1412267 6200395 Bind_1215 Beijerinckia indica subsp. indica ATCC 9039 DNA topoisomerase IV subunit B YP_001832346.1 1410192 R 395963 CDS YP_001832347.1 182678201 6200237 complement(1412509..1413918) 1 NC_010581.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I; glutamine synthetase, type I 1413918 6200237 Bind_1216 Beijerinckia indica subsp. indica ATCC 9039 glutamine synthetase, type I YP_001832347.1 1412509 R 395963 CDS YP_001832348.1 182678202 6198234 complement(1413976..1414314) 1 NC_010581.1 PFAM: nitrogen regulatory protein P-II; KEGG: mlo:mll0345 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1414314 6198234 Bind_1217 Beijerinckia indica subsp. indica ATCC 9039 nitrogen regulatory protein P-II YP_001832348.1 1413976 R 395963 CDS YP_001832349.1 182678203 6201047 complement(1414743..1415135) 1 NC_010581.1 KEGG: sus:Acid_7934 hypothetical protein; hypothetical protein 1415135 6201047 Bind_1218 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832349.1 1414743 R 395963 CDS YP_001832350.1 182678204 6201343 complement(1415588..1416442) 1 NC_010581.1 PFAM: Rhodanese domain protein; KEGG: xau:Xaut_4678 rhodanese domain protein; rhodanese domain-containing protein 1416442 6201343 Bind_1219 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001832350.1 1415588 R 395963 CDS YP_001832351.1 182678205 6198275 complement(1416472..1417530) 1 NC_010581.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: xau:Xaut_4677 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 1417530 6198275 Bind_1220 Beijerinckia indica subsp. indica ATCC 9039 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001832351.1 1416472 R 395963 CDS YP_001832352.1 182678206 6200044 1417764..1418330 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; KEGG: noc:Noc_2438 sigma 54 modulation protein/ribosomal protein S30EA; DNA-binding cold-shock protein 1418330 6200044 Bind_1221 Beijerinckia indica subsp. indica ATCC 9039 DNA-binding cold-shock protein YP_001832352.1 1417764 D 395963 CDS YP_001832353.1 182678207 6200354 1419030..1419806 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc01175 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1419806 6200354 Bind_1222 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832353.1 1419030 D 395963 CDS YP_001832354.1 182678208 6201065 complement(1419808..1420131) 1 NC_010581.1 KEGG: xau:Xaut_3391 hypothetical protein; hypothetical protein 1420131 6201065 Bind_1223 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832354.1 1419808 R 395963 CDS YP_001832355.1 182678209 6201146 complement(1420253..1421602) 1 NC_010581.1 KEGG: fre:Franean1_4104 putative monooxygenase, NtaA/SnaA/SoxA family; NtaA/SnaA/SoxA family monooxygenase 1421602 6201146 Bind_1224 Beijerinckia indica subsp. indica ATCC 9039 NtaA/SnaA/SoxA family monooxygenase YP_001832355.1 1420253 R 395963 CDS YP_001832356.1 182678210 6198213 1421919..1423220 1 NC_010581.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1423220 glyA 6198213 glyA Beijerinckia indica subsp. indica ATCC 9039 serine hydroxymethyltransferase YP_001832356.1 1421919 D 395963 CDS YP_001832357.1 182678211 6198209 1423365..1424570 1 NC_010581.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: rpa:RPA2726 putative riboflavin-specific deaminase / reductase; riboflavin biosynthesis protein RibD 1424570 6198209 Bind_1226 Beijerinckia indica subsp. indica ATCC 9039 riboflavin biosynthesis protein RibD YP_001832357.1 1423365 D 395963 CDS YP_001832358.1 182678212 6201784 1424573..1425181 1 NC_010581.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: rpb:RPB_2637 riboflavin synthase subunit alpha; riboflavin synthase subunit alpha 1425181 6201784 Bind_1227 Beijerinckia indica subsp. indica ATCC 9039 riboflavin synthase subunit alpha YP_001832358.1 1424573 D 395963 CDS YP_001832359.1 182678213 6201816 1425234..1426874 1 NC_010581.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: cak:Caul_3138 Na+/H+ antiporter; Na+/H+ antiporter 1426874 6201816 Bind_1228 Beijerinckia indica subsp. indica ATCC 9039 Na+/H+ antiporter YP_001832359.1 1425234 D 395963 CDS YP_001832360.1 182678214 6201831 complement(1426904..1429093) 1 NC_010581.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: rpc:RPC_3211 amylo-alpha-1,6-glucosidase; amylo-alpha-16-glucosidase 1429093 6201831 Bind_1229 Beijerinckia indica subsp. indica ATCC 9039 amylo-alpha-16-glucosidase YP_001832360.1 1426904 R 395963 CDS YP_001832361.1 182678215 6199702 complement(1429086..1430210) 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll5217 probable glycosyl transferase; group 1 glycosyl transferase 1430210 6199702 Bind_1230 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001832361.1 1429086 R 395963 CDS YP_001832362.1 182678216 6199846 complement(1430390..1432243) 1 NC_010581.1 KEGG: bbt:BBta_1839 cell division protein FtsH (ATP-dependent zinc-metallo protease); TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 1432243 6199846 Bind_1231 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent metalloprotease FtsH YP_001832362.1 1430390 R 395963 CDS YP_001832363.1 182678217 6200904 complement(1432419..1434308) 1 NC_010581.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mag:amb1849 probable cysteine desulfurase 1; SufS subfamily cysteine desulfurase 1434308 6200904 Bind_1232 Beijerinckia indica subsp. indica ATCC 9039 SufS subfamily cysteine desulfurase YP_001832363.1 1432419 R 395963 CDS YP_001832364.1 182678218 6199693 complement(1434289..1435212) 1 NC_010581.1 KEGG: chu:CHU_1814 hypothetical protein; hypothetical protein 1435212 6199693 Bind_1233 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832364.1 1434289 R 395963 CDS YP_001832365.1 182678219 6199822 1435733..1437034 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3517 major facilitator superfamily MFS_1; major facilitator transporter 1437034 6199822 Bind_1234 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832365.1 1435733 D 395963 CDS YP_001832366.1 182678220 6200220 1437027..1437461 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: rru:Rru_A3519 transcriptional regulator, MarR family; MarR family transcriptional regulator 1437461 6200220 Bind_1235 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001832366.1 1437027 D 395963 CDS YP_001832367.1 182678221 6199024 complement(1437466..1437741) 1 NC_010581.1 hypothetical protein 1437741 6199024 Bind_1236 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832367.1 1437466 R 395963 CDS YP_001832368.1 182678222 6200542 complement(1438168..1438485) 1 NC_010581.1 KEGG: mag:amb2048 hypothetical protein; hypothetical protein 1438485 6200542 Bind_1237 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832368.1 1438168 R 395963 CDS YP_001832369.1 182678223 6201105 complement(1438587..1440236) 1 NC_010581.1 KEGG: azc:AZC_2385 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1440236 6201105 Bind_1238 Beijerinckia indica subsp. indica ATCC 9039 exodeoxyribonuclease VII large subunit YP_001832369.1 1438587 R 395963 CDS YP_001832370.1 182678224 6199924 1440540..1442366 1 NC_010581.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: cak:Caul_4668 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1442366 6199924 Bind_1239 Beijerinckia indica subsp. indica ATCC 9039 sodium/hydrogen exchanger YP_001832370.1 1440540 D 395963 CDS YP_001832371.1 182678225 6201806 1442575..1443174 1 NC_010581.1 PFAM: NnrUfamily protein; KEGG: gdi:GDI0566 putative nitrate reductase protein; NnrU family protein 1443174 6201806 Bind_1240 Beijerinckia indica subsp. indica ATCC 9039 NnrU family protein YP_001832371.1 1442575 D 395963 CDS YP_001832372.1 182678226 6201701 complement(1443227..1444558) 1 NC_010581.1 KEGG: nha:Nham_1076 hypothetical protein; hypothetical protein 1444558 6201701 Bind_1241 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832372.1 1443227 R 395963 CDS YP_001832373.1 182678227 6198258 complement(1444651..1445985) 1 NC_010581.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1445985 6198258 Bind_1242 Beijerinckia indica subsp. indica ATCC 9039 beta alanine--pyruvate transaminase YP_001832373.1 1444651 R 395963 CDS YP_001832374.1 182678228 6198488 1446452..1446901 1 NC_010581.1 KEGG: cak:Caul_1252 hypothetical protein; hypothetical protein 1446901 6198488 Bind_1243 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832374.1 1446452 D 395963 CDS YP_001832375.1 182678229 6200665 1447034..1447414 1 NC_010581.1 hypothetical protein 1447414 6200665 Bind_1244 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832375.1 1447034 D 395963 CDS YP_001832376.1 182678230 6200854 1447583..1448599 1 NC_010581.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_1621 quinone oxidoreductase putative PIG3; PIG3 family NAD(P)H quinone oxidoreductase 1448599 6200854 Bind_1245 Beijerinckia indica subsp. indica ATCC 9039 PIG3 family NAD(P)H quinone oxidoreductase YP_001832376.1 1447583 D 395963 CDS YP_001832377.1 182678231 6198126 complement(1448696..1449694) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: prw:PsycPRwf_0720 transcriptional regulator, AraC family; AraC family transcriptional regulator 1449694 6198126 Bind_1246 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001832377.1 1448696 R 395963 CDS YP_001832378.1 182678232 6198742 1449809..1450381 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: pfo:Pfl_5042 isochorismatase hydrolase; isochorismatase hydrolase 1450381 6198742 Bind_1247 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001832378.1 1449809 D 395963 CDS YP_001832379.1 182678233 6200017 complement(1450762..1452870) 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sen:SACE_2844 TPR repeat; hypothetical protein 1452870 6200017 Bind_1249 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832379.1 1450762 R 395963 CDS YP_001832380.1 182678234 6199798 complement(1453026..1453475) 1 NC_010581.1 hypothetical protein 1453475 6199798 Bind_1250 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832380.1 1453026 R 395963 CDS YP_001832381.1 182678235 6198870 complement(1454107..1454268) 1 NC_010581.1 hypothetical protein 1454268 6198870 Bind_1251 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832381.1 1454107 R 395963 CDS YP_001832382.1 182678236 6201802 1454452..1454847 1 NC_010581.1 PFAM: Domain of unknown function DUF1863; KEGG: cbf:CLI_1847 hypothetical protein; hypothetical protein 1454847 6201802 Bind_1252 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832382.1 1454452 D 395963 CDS YP_001832383.1 182678237 6199569 complement(1455057..1456067) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: pnu:Pnuc_1320 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1456067 6199569 Bind_1253 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832383.1 1455057 R 395963 CDS YP_001832384.1 182678238 6199318 1456159..1456614 1 NC_010581.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: xau:Xaut_2944 protein of unknown function DUF306 MetA and HslJ; hypothetical protein 1456614 6199318 Bind_1254 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832384.1 1456159 D 395963 CDS YP_001832385.1 182678239 6201005 1456717..1456917 1 NC_010581.1 hypothetical protein 1456917 6201005 Bind_1255 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832385.1 1456717 D 395963 CDS YP_001832386.1 182678240 6200098 1456889..1457506 1 NC_010581.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1457506 rpsD 6200098 rpsD Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S4 YP_001832386.1 1456889 D 395963 CDS YP_001832387.1 182678241 6200232 complement(1457708..1458448) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3768 putative transcriptional regulator, TetR family; regulatory protein TetR 1458448 6200232 Bind_1257 Beijerinckia indica subsp. indica ATCC 9039 regulatory protein TetR YP_001832387.1 1457708 R 395963 CDS YP_001832388.1 182678242 6199946 complement(1458776..1459606) 1 NC_010581.1 KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1459606 6199946 Bind_1258 Beijerinckia indica subsp. indica ATCC 9039 pyrroline-5-carboxylate reductase YP_001832388.1 1458776 R 395963 CDS YP_001832389.1 182678243 6199610 complement(1459804..1460304) 1 NC_010581.1 PFAM: Protein of unknown function DUF1790; KEGG: mex:Mext_3770 protein of unknown function DUF1790; hypothetical protein 1460304 6199610 Bind_1259 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832389.1 1459804 R 395963 CDS YP_001832390.1 182678244 6198685 1460801..1461571 1 NC_010581.1 PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 protein of unknown function DUF45; hypothetical protein 1461571 6198685 Bind_1260 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832390.1 1460801 D 395963 CDS YP_001832391.1 182678245 6201592 complement(1461585..1464062) 1 NC_010581.1 KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB 1464062 6201592 Bind_1261 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent helicase HrpB YP_001832391.1 1461585 R 395963 CDS YP_001832392.1 182678246 6200065 1464889..1466820 1 NC_010581.1 PFAM: K potassium transporter; KEGG: bja:blr3803 potassium uptake protein; K potassium transporter 1466820 6200065 Bind_1262 Beijerinckia indica subsp. indica ATCC 9039 K potassium transporter YP_001832392.1 1464889 D 395963 CDS YP_001832393.1 182678247 6200305 1466902..1469661 1 NC_010581.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: bbt:BBta_7642 DNA mismatch repair protein; DNA mismatch repair protein MutS 1469661 6200305 Bind_1263 Beijerinckia indica subsp. indica ATCC 9039 DNA mismatch repair protein MutS YP_001832393.1 1466902 D 395963 CDS YP_001832394.1 182678248 6198619 1469897..1471375 1 NC_010581.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: gdi:GDI2957 putative sulfate transporter; sulfate transporter 1471375 6198619 Bind_1264 Beijerinckia indica subsp. indica ATCC 9039 sulfate transporter YP_001832394.1 1469897 D 395963 CDS YP_001832395.1 182678249 6198827 1471482..1471787 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gfo:GFO_1743 carboxymuconolactone decarboxylase family protein-possibly antioxidant defence related; alkylhydroperoxidase 1471787 6198827 Bind_1265 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001832395.1 1471482 D 395963 CDS YP_001832396.1 182678250 6199939 complement(1471789..1472889) 1 NC_010581.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1472889 hrcA 6199939 hrcA Beijerinckia indica subsp. indica ATCC 9039 heat-inducible transcription repressor YP_001832396.1 1471789 R 395963 CDS YP_001832397.1 182678251 6200064 complement(1472954..1473358) 1 NC_010581.1 PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator; response regulator receiver/SARP domain-containing protein 1473358 6200064 Bind_1267 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver/SARP domain-containing protein YP_001832397.1 1472954 R 395963 CDS YP_001832398.1 182678252 6199523 complement(1473658..1475043) 1 NC_010581.1 KEGG: gdi:GDI0705 hypothetical protein; hypothetical protein 1475043 6199523 Bind_1268 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832398.1 1473658 R 395963 CDS YP_001832399.1 182678253 6200198 complement(1475391..1476980) 1 NC_010581.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1476980 6200198 Bind_1269 Beijerinckia indica subsp. indica ATCC 9039 D-3-phosphoglycerate dehydrogenase YP_001832399.1 1475391 R 395963 CDS YP_001832400.1 182678254 6199790 complement(1477189..1478361) 1 NC_010581.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 1478361 6199790 Bind_1270 Beijerinckia indica subsp. indica ATCC 9039 phosphoserine aminotransferase YP_001832400.1 1477189 R 395963 CDS YP_001832401.1 182678255 6201810 1478659..1479777 1 NC_010581.1 PFAM: Catalase domain protein; KEGG: mex:Mext_0230 catalase domain protein; catalase domain-containing protein 1479777 6201810 Bind_1271 Beijerinckia indica subsp. indica ATCC 9039 catalase domain-containing protein YP_001832401.1 1478659 D 395963 CDS YP_001832402.1 182678256 6198243 1479774..1480346 1 NC_010581.1 PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561; cytochrome B561 1480346 6198243 Bind_1272 Beijerinckia indica subsp. indica ATCC 9039 cytochrome B561 YP_001832402.1 1479774 D 395963 CDS YP_001832403.1 182678257 6199647 1480481..1481761 1 NC_010581.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1481761 6199647 Bind_1273 Beijerinckia indica subsp. indica ATCC 9039 argininosuccinate synthase YP_001832403.1 1480481 D 395963 CDS YP_001832404.1 182678258 6200240 1482096..1482440 1 NC_010581.1 PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain protein; SWIB/MDM2 domain-containing protein 1482440 6200240 Bind_1274 Beijerinckia indica subsp. indica ATCC 9039 SWIB/MDM2 domain-containing protein YP_001832404.1 1482096 D 395963 CDS YP_001832405.1 182678259 6199919 1482640..1483587 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: afw:Anae109_1681 aldo/keto reductase; aldo/keto reductase 1483587 6199919 Bind_1275 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001832405.1 1482640 D 395963 CDS YP_001832406.1 182678260 6199975 complement(1483617..1484354) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_pAT_564 short chain dehydrogenase; short chain dehydrogenase 1484354 6199975 Bind_1276 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001832406.1 1483617 R 395963 CDS YP_001832407.1 182678261 6201651 1484492..1485391 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH00344 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1485391 6201651 Bind_1277 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832407.1 1484492 D 395963 CDS YP_001832408.1 182678262 6200248 complement(1485401..1486096) 1 NC_010581.1 PFAM: Rhodanese domain protein; regulatory protein ArsR; KEGG: bps:BPSS2118 ArsR family transcriptional regulator; ArsR family transcriptional regulator 1486096 6200248 Bind_1278 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001832408.1 1485401 R 395963 CDS YP_001832409.1 182678263 6200579 1486137..1486352 1 NC_010581.1 KEGG: acr:Acry_3467 beta-lactamase domain protein; hypothetical protein 1486352 6200579 Bind_1279 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832409.1 1486137 D 395963 CDS YP_001832410.1 182678264 6201129 1486476..1486841 1 NC_010581.1 KEGG: mes:Meso_2278 hypothetical protein; hypothetical protein 1486841 6201129 Bind_1280 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832410.1 1486476 D 395963 CDS YP_001832411.1 182678265 6200306 1487128..1488288 1 NC_010581.1 KEGG: bur:Bcep18194_B0205 hypothetical protein; hypothetical protein 1488288 6200306 Bind_1281 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832411.1 1487128 D 395963 CDS YP_001832412.1 182678266 6200162 complement(1488551..1488961) 1 NC_010581.1 PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_2128 thioesterase superfamily protein; thioesterase superfamily protein 1488961 6200162 Bind_1282 Beijerinckia indica subsp. indica ATCC 9039 thioesterase superfamily protein YP_001832412.1 1488551 R 395963 CDS YP_001832413.1 182678267 6201378 complement(1489141..1491204) 1 NC_010581.1 PFAM: protein of unknown function DUF255; KEGG: xau:Xaut_1832 protein of unknown function DUF255; hypothetical protein 1491204 6201378 Bind_1283 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832413.1 1489141 R 395963 CDS YP_001832414.1 182678268 6200966 1491469..1492824 1 NC_010581.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1492824 trmE 6200966 trmE Beijerinckia indica subsp. indica ATCC 9039 tRNA modification GTPase TrmE YP_001832414.1 1491469 D 395963 CDS YP_001832415.1 182678269 6201797 1492866..1494722 1 NC_010581.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1494722 6201797 Bind_1285 Beijerinckia indica subsp. indica ATCC 9039 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001832415.1 1492866 D 395963 CDS YP_001832416.1 182678270 6199997 1494719..1495384 1 NC_010581.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: xau:Xaut_1835 glucose inhibited division protein; methyltransferase GidB 1495384 6199997 Bind_1286 Beijerinckia indica subsp. indica ATCC 9039 methyltransferase GidB YP_001832416.1 1494719 D 395963 CDS YP_001832417.1 182678271 6198704 1495467..1497059 1 NC_010581.1 KEGG: xau:Xaut_1732 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1497059 6198704 Bind_1287 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001832417.1 1495467 D 395963 CDS YP_001832418.1 182678272 6198866 1497166..1497453 1 NC_010581.1 PFAM: protein of unknown function DUF74; KEGG: ter:Tery_3795 protein of unknown function DUF74; hypothetical protein 1497453 6198866 Bind_1288 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832418.1 1497166 D 395963 CDS YP_001832419.1 182678273 6199380 1497607..1497861 1 NC_010581.1 KEGG: vei:Veis_4393 hypothetical protein; hypothetical protein 1497861 6199380 Bind_1289 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832419.1 1497607 D 395963 CDS YP_001832420.1 182678274 6200383 complement(1497901..1498518) 1 NC_010581.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1498518 gmk 6200383 gmk Beijerinckia indica subsp. indica ATCC 9039 guanylate kinase YP_001832420.1 1497901 R 395963 CDS YP_001832421.1 182678275 6199163 complement(1498699..1499583) 1 NC_010581.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: xau:Xaut_3135 domain of unknown function DUF1732; hypothetical protein 1499583 6199163 Bind_1291 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832421.1 1498699 R 395963 CDS YP_001832422.1 182678276 6200308 complement(1499580..1500215) 1 NC_010581.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: xau:Xaut_2324 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1500215 6200308 Bind_1292 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylglycinamide formyltransferase YP_001832422.1 1499580 R 395963 CDS YP_001832423.1 182678277 6201788 complement(1500266..1501333) 1 NC_010581.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1501333 6201788 Bind_1293 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylaminoimidazole synthetase YP_001832423.1 1500266 R 395963 CDS YP_001832424.1 182678278 6198640 1502079..1503011 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_3121 transcriptional regulator; LysR family transcriptional regulator 1503011 6198640 Bind_1294 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832424.1 1502079 D 395963 CDS YP_001832425.1 182678279 6200608 1503106..1503342 1 NC_010581.1 hypothetical protein 1503342 6200608 Bind_1295 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832425.1 1503106 D 395963 CDS YP_001832426.1 182678280 6199032 1503802..1504350 1 NC_010581.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpa:RPA3050 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1504350 6199032 Bind_1296 Beijerinckia indica subsp. indica ATCC 9039 CDP-alcohol phosphatidyltransferase YP_001832426.1 1503802 D 395963 CDS YP_001832427.1 182678281 6201188 1504507..1505655 1 NC_010581.1 PFAM: protein of unknown function UPF0118; KEGG: mes:Meso_1964 protein of unknown function UPF0118; hypothetical protein 1505655 6201188 Bind_1297 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832427.1 1504507 D 395963 CDS YP_001832428.1 182678282 6200235 1505657..1506355 1 NC_010581.1 PFAM: Chromosomal replication initiator DnaA; KEGG: mex:Mext_2066 chromosomal replication initiator DnaA; chromosomal replication initiator DnaA 1506355 6200235 Bind_1298 Beijerinckia indica subsp. indica ATCC 9039 chromosomal replication initiator DnaA YP_001832428.1 1505657 D 395963 CDS YP_001832429.1 182678283 6199993 complement(1506413..1506733) 1 NC_010581.1 KEGG: ccr:CC_1835 hypothetical protein; hypothetical protein 1506733 6199993 Bind_1299 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832429.1 1506413 R 395963 CDS YP_001832430.1 182678284 6199050 1507015..1508061 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A0896 hypothetical protein; hypothetical protein 1508061 6199050 Bind_1300 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832430.1 1507015 D 395963 CDS YP_001832431.1 182678285 6198591 1508191..1508880 1 NC_010581.1 PFAM: protein of unknown function DUF938; KEGG: mca:MCA0911 hypothetical protein; hypothetical protein 1508880 6198591 Bind_1301 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832431.1 1508191 D 395963 CDS YP_001832432.1 182678286 6198537 complement(1508999..1510432) 1 NC_010581.1 PFAM: Amidase; KEGG: cak:Caul_3620 amidase; amidase 1510432 6198537 Bind_1302 Beijerinckia indica subsp. indica ATCC 9039 amidase YP_001832432.1 1508999 R 395963 CDS YP_001832433.1 182678287 6199636 complement(1511463..1511990) 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0323 putative glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase 1511990 6199636 Bind_1304 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001832433.1 1511463 R 395963 CDS YP_001832434.1 182678288 6198329 complement(1512031..1512528) 1 NC_010581.1 KEGG: gdi:GDI0324 hypothetical protein; hypothetical protein 1512528 6198329 Bind_1305 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832434.1 1512031 R 395963 CDS YP_001832435.1 182678289 6198944 1512998..1513624 1 NC_010581.1 PFAM: cytochrome B561; KEGG: bpt:Bpet1668 cytochrome b561 family protein; cytochrome B561 1513624 6198944 Bind_1306 Beijerinckia indica subsp. indica ATCC 9039 cytochrome B561 YP_001832435.1 1512998 D 395963 CDS YP_001832436.1 182678290 6200996 1513647..1514342 1 NC_010581.1 PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 protein of unknown function DUF540; hypothetical protein 1514342 6200996 Bind_1307 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832436.1 1513647 D 395963 CDS YP_001832437.1 182678291 6198881 complement(1514435..1515445) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bbt:BBta_0224 hypothetical protein; NADH dehydrogenase (ubiquinone) 1515445 6198881 Bind_1308 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase (ubiquinone) YP_001832437.1 1514435 R 395963 CDS YP_001832438.1 182678292 6201148 complement(1517201..1517590) 1 NC_010581.1 hypothetical protein 1517590 6201148 Bind_1309 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832438.1 1517201 R 395963 CDS YP_001832439.1 182678293 6199979 complement(1518055..1518777) 1 NC_010581.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpt:Bpet3236 2-haloalkanoic acid dehalogenase; haloacid dehalogenase 1518777 6199979 Bind_1310 Beijerinckia indica subsp. indica ATCC 9039 haloacid dehalogenase YP_001832439.1 1518055 R 395963 CDS YP_001832440.1 182678294 6201389 1518822..1519205 1 NC_010581.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: rpd:RPD_3620 CrcB protein; CrcB protein 1519205 6201389 Bind_1311 Beijerinckia indica subsp. indica ATCC 9039 CrcB protein YP_001832440.1 1518822 D 395963 CDS YP_001832441.1 182678295 6201583 1519202..1520254 1 NC_010581.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bja:bll5366 putative ribosomal large subunit pseudouridine synthase C; RluA family pseudouridine synthase 1520254 6201583 Bind_1312 Beijerinckia indica subsp. indica ATCC 9039 RluA family pseudouridine synthase YP_001832441.1 1519202 D 395963 CDS YP_001832442.1 182678296 6199544 1520241..1520939 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 1520939 6199544 Bind_1313 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001832442.1 1520241 D 395963 CDS YP_001832443.1 182678297 6199324 1520975..1521796 1 NC_010581.1 PFAM: ATP12 ATPase; KEGG: rpb:RPB_2337 ATP12 ATPase; ATP12 ATPase 1521796 6199324 Bind_1314 Beijerinckia indica subsp. indica ATCC 9039 ATP12 ATPase YP_001832443.1 1520975 D 395963 CDS YP_001832444.1 182678298 6201236 1521809..1522330 1 NC_010581.1 PFAM: glutathione peroxidase; KEGG: spe:Spro_2152 glutathione peroxidase; glutathione peroxidase 1522330 6201236 Bind_1315 Beijerinckia indica subsp. indica ATCC 9039 glutathione peroxidase YP_001832444.1 1521809 D 395963 CDS YP_001832445.1 182678299 6199243 1522343..1522870 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_2212 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1522870 6199243 Bind_1316 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832445.1 1522343 D 395963 CDS YP_001832446.1 182678300 6199668 1522975..1524507 1 NC_010581.1 PFAM: carboxyl transferase; KEGG: ret:RHE_CH02232 propionyl-CoA carboxylase beta chain protein; carboxyl transferase 1524507 6199668 Bind_1317 Beijerinckia indica subsp. indica ATCC 9039 carboxyl transferase YP_001832446.1 1522975 D 395963 CDS YP_001832447.1 182678301 6199593 1524581..1526587 1 NC_010581.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: azc:AZC_1774 propionyl-coenzyme A carboxylase alpha polypeptide; carbamoyl-phosphate synthase L chain ATP-binding 1526587 6199593 Bind_1318 Beijerinckia indica subsp. indica ATCC 9039 carbamoyl-phosphate synthase L chain ATP-binding YP_001832447.1 1524581 D 395963 CDS YP_001832448.1 182678302 6200176 1527782..1529899 1 NC_010581.1 KEGG: afm:AFUA_5G00480 exoinulinase InuD; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; levanase 1529899 6200176 Bind_1319 Beijerinckia indica subsp. indica ATCC 9039 levanase YP_001832448.1 1527782 D 395963 CDS YP_001832449.1 182678303 6199792 complement(1530227..1532422) 1 NC_010581.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1532422 6199792 Bind_1320 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent DNA helicase RecG YP_001832449.1 1530227 R 395963 CDS YP_001832450.1 182678304 6200249 1532597..1533451 1 NC_010581.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1533451 panC 6200249 panC Beijerinckia indica subsp. indica ATCC 9039 pantoate--beta-alanine ligase YP_001832450.1 1532597 D 395963 CDS YP_001832451.1 182678305 6200283 1533462..1533767 1 NC_010581.1 PFAM: acylphosphatase; KEGG: nha:Nham_2164 acylphosphatase; acylphosphatase 1533767 6200283 Bind_1322 Beijerinckia indica subsp. indica ATCC 9039 acylphosphatase YP_001832451.1 1533462 D 395963 CDS YP_001832452.1 182678306 6201228 complement(1533994..1534875) 1 NC_010581.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr2811 hypothetical protein; hypothetical protein 1534875 6201228 Bind_1323 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832452.1 1533994 R 395963 CDS YP_001832453.1 182678307 6200123 complement(1535007..1535270) 1 NC_010581.1 hypothetical protein 1535270 6200123 Bind_1324 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832453.1 1535007 R 395963 CDS YP_001832454.1 182678308 6200920 1535462..1536277 1 NC_010581.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pla:Plav_2581 RNA methyltransferase, TrmH family, group 1; tRNA/rRNA methyltransferase SpoU 1536277 6200920 Bind_1325 Beijerinckia indica subsp. indica ATCC 9039 tRNA/rRNA methyltransferase SpoU YP_001832454.1 1535462 D 395963 CDS YP_001832455.1 182678309 6199823 1536523..1537386 1 NC_010581.1 KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 1537386 6199823 Bind_1326 Beijerinckia indica subsp. indica ATCC 9039 glutamate racemase YP_001832455.1 1536523 D 395963 CDS YP_001832456.1 182678310 6200185 complement(1537381..1538361) 1 NC_010581.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: xau:Xaut_1843 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1538361 6200185 Bind_1327 Beijerinckia indica subsp. indica ATCC 9039 riboflavin biosynthesis protein RibF YP_001832456.1 1537381 R 395963 CDS YP_001832457.1 182678311 6200959 complement(1538523..1539422) 1 NC_010581.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nwi:Nwi_2539 HAD-superfamily subfamily IIA hydrolase; HAD family hydrolase 1539422 6200959 Bind_1328 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001832457.1 1538523 R 395963 CDS YP_001832458.1 182678312 6199811 1539680..1540561 1 NC_010581.1 KEGG: rpb:RPB_4107 hypothetical protein; hypothetical protein 1540561 6199811 Bind_1329 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832458.1 1539680 D 395963 CDS YP_001832459.1 182678313 6200507 1540866..1541204 1 NC_010581.1 PFAM: Rhodanese domain protein; KEGG: bra:BRADO3192 putative sulfurtransferase (rhodanese); rhodanese domain-containing protein 1541204 6200507 Bind_1330 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001832459.1 1540866 D 395963 CDS YP_001832460.1 182678314 6200740 1541345..1541914 1 NC_010581.1 KEGG: scl:sce6240 hypothetical protein; hypothetical protein 1541914 6200740 Bind_1331 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832460.1 1541345 D 395963 CDS YP_001832461.1 182678315 6199774 complement(1541951..1542637) 1 NC_010581.1 KEGG: amr:AM1_2247 hypothetical protein; anti-ECF sigma factor ChrR 1542637 6199774 Bind_1332 Beijerinckia indica subsp. indica ATCC 9039 anti-ECF sigma factor ChrR YP_001832461.1 1541951 R 395963 CDS YP_001832462.1 182678316 6200328 1542794..1543249 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: eba:ebA6753 hypothetical protein; alkylhydroperoxidase 1543249 6200328 Bind_1333 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001832462.1 1542794 D 395963 CDS YP_001832463.1 182678317 6200862 complement(1543296..1545002) 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_0877 general substrate transporter; major facilitator transporter 1545002 6200862 Bind_1334 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832463.1 1543296 R 395963 CDS YP_001832464.1 182678318 6200028 1545416..1546015 1 NC_010581.1 PFAM: protein of unknown function DUF461; KEGG: xau:Xaut_0418 protein of unknown function DUF461; hypothetical protein 1546015 6200028 Bind_1335 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832464.1 1545416 D 395963 CDS YP_001832465.1 182678319 6199581 complement(1546035..1546916) 1 NC_010581.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: azc:AZC_0878 RNA methyltransferase; RNA methyltransferase 1546916 6199581 Bind_1336 Beijerinckia indica subsp. indica ATCC 9039 RNA methyltransferase YP_001832465.1 1546035 R 395963 CDS YP_001832466.1 182678320 6200332 1547579..1548649 1 NC_010581.1 PFAM: GAF domain protein; HWE histidine kinase; KEGG: mex:Mext_3300 PAS sensor protein; signal transduction histidine kinase 1548649 6200332 Bind_1337 Beijerinckia indica subsp. indica ATCC 9039 signal transduction histidine kinase YP_001832466.1 1547579 D 395963 CDS YP_001832467.1 182678321 6201679 complement(1548659..1550020) 1 NC_010581.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1550020 6201679 Bind_1338 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA carboxylase, biotin carboxylase YP_001832467.1 1548659 R 395963 CDS YP_001832468.1 182678322 6198913 complement(1550242..1550700) 1 NC_010581.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1550700 6198913 Bind_1339 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001832468.1 1550242 R 395963 CDS YP_001832469.1 182678323 6200060 complement(1550697..1550873) 1 NC_010581.1 hypothetical protein 1550873 6200060 Bind_1340 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832469.1 1550697 R 395963 CDS YP_001832470.1 182678324 6199887 1551122..1551313 1 NC_010581.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: azc:AZC_0881 putative translocation complex protein; preprotein translocase subunit SecE 1551313 6199887 Bind_1341 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit SecE YP_001832470.1 1551122 D 395963 CDS YP_001832471.1 182678325 6199750 1551369..1551899 1 NC_010581.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mex:Mext_3997 transcription termination/antitermination factor NusG; NusG antitermination factor 1551899 6199750 Bind_1342 Beijerinckia indica subsp. indica ATCC 9039 NusG antitermination factor YP_001832471.1 1551369 D 395963 CDS YP_001832472.1 182678326 6198888 1552128..1552556 1 NC_010581.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1552556 rplK 6198888 rplK Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L11 YP_001832472.1 1552128 D 395963 CDS YP_001832473.1 182678327 6200286 1552563..1553258 1 NC_010581.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1553258 rplA 6200286 rplA Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L1 YP_001832473.1 1552563 D 395963 CDS YP_001832474.1 182678328 6199705 1553847..1554365 1 NC_010581.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1554365 rplJ 6199705 rplJ Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L10 YP_001832474.1 1553847 D 395963 CDS YP_001832475.1 182678329 6199200 1554444..1554824 1 NC_010581.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1554824 rplL 6199200 rplL Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L7/L12 YP_001832475.1 1554444 D 395963 CDS YP_001832476.1 182678330 6199230 1555240..1559403 1 NC_010581.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1559403 rpoB 6199230 rpoB Beijerinckia indica subsp. indica ATCC 9039 DNA-directed RNA polymerase subunit beta YP_001832476.1 1555240 D 395963 CDS YP_001832477.1 182678331 6200281 1559534..1563718 1 NC_010581.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1563718 6200281 Bind_1348 Beijerinckia indica subsp. indica ATCC 9039 DNA-directed RNA polymerase subunit beta' YP_001832477.1 1559534 D 395963 CDS YP_001832478.1 182678332 6200681 1564288..1564659 1 NC_010581.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1564659 rpsL 6200681 rpsL Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S12 YP_001832478.1 1564288 D 395963 CDS YP_001832479.1 182678333 6201124 1564766..1565236 1 NC_010581.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1565236 6201124 Bind_1350 Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S7 YP_001832479.1 1564766 D 395963 CDS YP_001832480.1 182678334 6199245 1565279..1567354 1 NC_010581.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1567354 6199245 Bind_1351 Beijerinckia indica subsp. indica ATCC 9039 elongation factor G YP_001832480.1 1565279 D 395963 CDS YP_001832481.1 182678335 6200779 1567399..1568589 1 NC_010581.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1568589 6200779 Bind_1352 Beijerinckia indica subsp. indica ATCC 9039 elongation factor Tu YP_001832481.1 1567399 D 395963 CDS YP_001832482.1 182678336 6201309 1568759..1569067 1 NC_010581.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1569067 rpsJ 6201309 rpsJ Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S10 YP_001832482.1 1568759 D 395963 CDS YP_001832483.1 182678337 6201329 1569135..1569857 1 NC_010581.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1569857 rplC 6201329 rplC Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L3 YP_001832483.1 1569135 D 395963 CDS YP_001832484.1 182678338 6200909 1569861..1570481 1 NC_010581.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1570481 rplD 6200909 rplD Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L4 YP_001832484.1 1569861 D 395963 CDS YP_001832485.1 182678339 6199657 1570478..1570789 1 NC_010581.1 PFAM: Ribosomal protein L25/L23; KEGG: rpd:RPD_3182 50S ribosomal protein L23; 50S ribosomal protein L25 1570789 6199657 Bind_1356 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L25 YP_001832485.1 1570478 D 395963 CDS YP_001832486.1 182678340 6199319 1570811..1571650 1 NC_010581.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1571650 rplB 6199319 rplB Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L2 YP_001832486.1 1570811 D 395963 CDS YP_001832487.1 182678341 6200543 1571654..1571932 1 NC_010581.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1571932 rpsS 6200543 rpsS Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S19 YP_001832487.1 1571654 D 395963 CDS YP_001832488.1 182678342 6198667 1571942..1572331 1 NC_010581.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1572331 rplV 6198667 rplV Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L22 YP_001832488.1 1571942 D 395963 CDS YP_001832489.1 182678343 6200468 1572342..1573067 1 NC_010581.1 KEGG: bja:bll5394 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 1573067 6200468 Bind_1360 Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S3 YP_001832489.1 1572342 D 395963 CDS YP_001832490.1 182678344 6199464 1573104..1573517 1 NC_010581.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1573517 rplP 6199464 rplP Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L16 YP_001832490.1 1573104 D 395963 CDS YP_001832491.1 182678345 6200504 1573530..1573742 1 NC_010581.1 PFAM: ribosomal protein L29; KEGG: mex:Mext_2170 ribosomal protein L29; 50S ribosomal protein L29 1573742 6200504 Bind_1362 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L29 YP_001832491.1 1573530 D 395963 CDS YP_001832492.1 182678346 6199943 1573784..1574026 1 NC_010581.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1574026 rpsQ 6199943 rpsQ Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S17 YP_001832492.1 1573784 D 395963 CDS YP_001832493.1 182678347 6200832 1574123..1574491 1 NC_010581.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1574491 rplN 6200832 rplN Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L14 YP_001832493.1 1574123 D 395963 CDS YP_001832494.1 182678348 6198515 1574491..1574808 1 NC_010581.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1574808 6198515 Bind_1365 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L24 YP_001832494.1 1574491 D 395963 CDS YP_001832495.1 182678349 6201678 1574912..1575505 1 NC_010581.1 PFAM: ribosomal protein L5; KEGG: xau:Xaut_4786 ribosomal protein L5; 50S ribosomal protein L5 1575505 6201678 Bind_1366 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L5 YP_001832495.1 1574912 D 395963 CDS YP_001832496.1 182678350 6200346 1575543..1575848 1 NC_010581.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1575848 rpsN 6200346 rpsN Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S14 YP_001832496.1 1575543 D 395963 CDS YP_001832497.1 182678351 6200279 1575861..1576259 1 NC_010581.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1576259 rpsH 6200279 rpsH Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S8 YP_001832497.1 1575861 D 395963 CDS YP_001832498.1 182678352 6200784 1576284..1576817 1 NC_010581.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1576817 rplF 6200784 rplF Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L6 YP_001832498.1 1576284 D 395963 CDS YP_001832499.1 182678353 6199018 1576842..1577204 1 NC_010581.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1577204 rplR 6199018 rplR Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L18 YP_001832499.1 1576842 D 395963 CDS YP_001832500.1 182678354 6199836 1577304..1577873 1 NC_010581.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1577873 rpsE 6199836 rpsE Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S5 YP_001832500.1 1577304 D 395963 CDS YP_001832501.1 182678355 6201187 1577887..1578081 1 NC_010581.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1578081 rpmD 6201187 rpmD Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L30 YP_001832501.1 1577887 D 395963 CDS YP_001832502.1 182678356 6201162 1578094..1578576 1 NC_010581.1 late assembly protein; 50S ribosomal protein L15 1578576 rplO 6201162 rplO Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L15 YP_001832502.1 1578094 D 395963 CDS YP_001832503.1 182678357 6199813 1578931..1580265 1 NC_010581.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: azc:AZC_2534 preprotein translocase SecY subunit; preprotein translocase subunit SecY 1580265 6199813 Bind_1374 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit SecY YP_001832503.1 1578931 D 395963 CDS YP_001832504.1 182678358 6200570 1580262..1580843 1 NC_010581.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1580843 adk 6200570 adk Beijerinckia indica subsp. indica ATCC 9039 adenylate kinase YP_001832504.1 1580262 D 395963 CDS YP_001832505.1 182678359 6201230 complement(1580918..1581367) 1 NC_010581.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mlo:mlr1674 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1581367 6201230 Bind_1376 Beijerinckia indica subsp. indica ATCC 9039 BadM/Rrf2 family transcriptional regulator YP_001832505.1 1580918 R 395963 CDS YP_001832506.1 182678360 6199497 complement(1581648..1582145) 1 NC_010581.1 KEGG: bcs:BCAN_A0053 hypothetical protein; hypothetical protein 1582145 6199497 Bind_1377 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832506.1 1581648 R 395963 CDS YP_001832507.1 182678361 6201141 1582589..1583059 1 NC_010581.1 PFAM: ribosomal protein L13; KEGG: azc:AZC_2190 ribosomal protein L13; 50S ribosomal protein L13 1583059 6201141 Bind_1378 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L13 YP_001832507.1 1582589 D 395963 CDS YP_001832508.1 182678362 6199895 1583062..1583541 1 NC_010581.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1583541 rpsI 6199895 rpsI Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S9 YP_001832508.1 1583062 D 395963 CDS YP_001832509.1 182678363 6200514 1583638..1584564 1 NC_010581.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 1584564 6200514 Bind_1380 Beijerinckia indica subsp. indica ATCC 9039 N-acetyl-gamma-glutamyl-phosphate reductase YP_001832509.1 1583638 D 395963 CDS YP_001832510.1 182678364 6199496 complement(1584647..1586968) 1 NC_010581.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mlo:mlr0937 poly-beta-hydroxybutyrate synthase; poly(R)-hydroxyalkanoic acid synthase 1586968 6199496 Bind_1381 Beijerinckia indica subsp. indica ATCC 9039 poly(R)-hydroxyalkanoic acid synthase YP_001832510.1 1584647 R 395963 CDS YP_001832511.1 182678365 6198666 1587164..1587559 1 NC_010581.1 hypothetical protein 1587559 6198666 Bind_1382 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832511.1 1587164 D 395963 CDS YP_001832512.1 182678366 6200998 1587807..1588985 1 NC_010581.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: rpe:RPE_4612 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 1588985 6200998 Bind_1383 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylamine--glycine ligase YP_001832512.1 1587807 D 395963 CDS YP_001832513.1 182678367 6200811 complement(1589095..1589580) 1 NC_010581.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 1589580 6200811 Bind_1384 Beijerinckia indica subsp. indica ATCC 9039 activator of Hsp90 ATPase 1 family protein YP_001832513.1 1589095 R 395963 CDS YP_001832514.1 182678368 6199917 complement(1589828..1590142) 1 NC_010581.1 KEGG: xau:Xaut_1139 hypothetical protein; hypothetical protein 1590142 6199917 Bind_1385 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832514.1 1589828 R 395963 CDS YP_001832515.1 182678369 6200810 complement(1590235..1590876) 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: hau:Haur_3125 isochorismatase hydrolase; isochorismatase hydrolase 1590876 6200810 Bind_1386 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001832515.1 1590235 R 395963 CDS YP_001832516.1 182678370 6199998 1591052..1592353 1 NC_010581.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1592353 6199998 Bind_1387 Beijerinckia indica subsp. indica ATCC 9039 homoserine dehydrogenase YP_001832516.1 1591052 D 395963 CDS YP_001832517.1 182678371 6200108 1592648..1593643 1 NC_010581.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1593643 glpX 6200108 glpX Beijerinckia indica subsp. indica ATCC 9039 fructose 1,6-bisphosphatase II YP_001832517.1 1592648 D 395963 CDS YP_001832518.1 182678372 6198598 complement(1593837..1595003) 1 NC_010581.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: xau:Xaut_3138 ribonuclease D; ribonuclease D 1595003 6198598 Bind_1389 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease D YP_001832518.1 1593837 R 395963 CDS YP_001832519.1 182678373 6198797 1595199..1595747 1 NC_010581.1 PFAM: Invasion associated locus B family protein; KEGG: mmw:Mmwyl1_0483 invasion associated locus B family protein; invasion associated locus B family protein 1595747 6198797 Bind_1390 Beijerinckia indica subsp. indica ATCC 9039 invasion associated locus B family protein YP_001832519.1 1595199 D 395963 CDS YP_001832520.1 182678374 6201356 1596058..1596885 1 NC_010581.1 hypothetical protein 1596885 6201356 Bind_1391 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832520.1 1596058 D 395963 CDS YP_001832521.1 182678375 6201326 1597231..1598340 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bja:bll7313 RND efflux membrane fusion protein; RND family efflux transporter MFP subunit 1598340 6201326 Bind_1392 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001832521.1 1597231 D 395963 CDS YP_001832522.1 182678376 6198572 1598337..1601381 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: bja:bll7312 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1601381 6198572 Bind_1393 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001832522.1 1598337 D 395963 CDS YP_001832523.1 182678377 6199856 1601624..1601914 1 NC_010581.1 PFAM: YCII-related; KEGG: shm:Shewmr7_2107 YCII-related; hypothetical protein 1601914 6199856 Bind_1394 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832523.1 1601624 D 395963 CDS YP_001832524.1 182678378 6198791 complement(1602125..1603579) 1 NC_010581.1 PFAM: Citrate transporter; KEGG: azc:AZC_1305 putative H+/gluconate symporter; citrate transporter 1603579 6198791 Bind_1395 Beijerinckia indica subsp. indica ATCC 9039 citrate transporter YP_001832524.1 1602125 R 395963 CDS YP_001832525.1 182678379 6199281 1604348..1606141 1 NC_010581.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 1606141 6199281 Bind_1396 Beijerinckia indica subsp. indica ATCC 9039 aspartyl-tRNA synthetase YP_001832525.1 1604348 D 395963 CDS YP_001832526.1 182678380 6199900 complement(1606161..1606481) 1 NC_010581.1 hypothetical protein 1606481 6199900 Bind_1397 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832526.1 1606161 R 395963 CDS YP_001832527.1 182678381 6199332 complement(1606775..1607452) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: mes:Meso_1193 putative phage repressor; putative phage repressor 1607452 6199332 Bind_1398 Beijerinckia indica subsp. indica ATCC 9039 putative phage repressor YP_001832527.1 1606775 R 395963 CDS YP_001832528.1 182678382 6199455 complement(1608260..1609168) 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4754 secretion protein HlyD family protein; secretion protein HlyD family protein 1609168 6199455 Bind_1399 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001832528.1 1608260 R 395963 CDS YP_001832529.1 182678383 6200348 complement(1609184..1609375) 1 NC_010581.1 PFAM: protein of unknown function DUF1656; KEGG: pfl:PFL_4603 hypothetical protein; hypothetical protein 1609375 6200348 Bind_1400 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832529.1 1609184 R 395963 CDS YP_001832530.1 182678384 6200790 complement(1609543..1611687) 1 NC_010581.1 KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region; fusaric acid resistance protein region 1611687 6200790 Bind_1401 Beijerinckia indica subsp. indica ATCC 9039 fusaric acid resistance protein region YP_001832530.1 1609543 R 395963 CDS YP_001832531.1 182678385 6200193 complement(1611684..1612460) 1 NC_010581.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpc:RPC_2496 exodeoxyribonuclease III (xth); exodeoxyribonuclease III 1612460 6200193 Bind_1402 Beijerinckia indica subsp. indica ATCC 9039 exodeoxyribonuclease III YP_001832531.1 1611684 R 395963 CDS YP_001832532.1 182678386 6198987 complement(1612553..1614070) 1 NC_010581.1 KEGG: bbt:BBta_7186 putative membrane protein of unknown function; hypothetical protein 1614070 6198987 Bind_1403 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832532.1 1612553 R 395963 CDS YP_001832533.1 182678387 6199989 complement(1614176..1615684) 1 NC_010581.1 KEGG: bbt:BBta_7186 putative membrane protein of unknown function; hypothetical protein 1615684 6199989 Bind_1404 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832533.1 1614176 R 395963 CDS YP_001832534.1 182678388 6200677 complement(1615951..1617249) 1 NC_010581.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_3901 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 1617249 6200677 Bind_1405 Beijerinckia indica subsp. indica ATCC 9039 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001832534.1 1615951 R 395963 CDS YP_001832535.1 182678389 6200606 1617586..1618560 1 NC_010581.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rru:Rru_A3272 protein of unknown function DUF6, transmembrane; hypothetical protein 1618560 6200606 Bind_1406 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832535.1 1617586 D 395963 CDS YP_001832536.1 182678390 6200463 complement(1618639..1619436) 1 NC_010581.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mlo:mll7814 quinone reductase; ribosyldihydronicotinamide dehydrogenase 1619436 6200463 Bind_1407 Beijerinckia indica subsp. indica ATCC 9039 ribosyldihydronicotinamide dehydrogenase YP_001832536.1 1618639 R 395963 CDS YP_001832537.1 182678391 6201118 1619533..1620465 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator 1620465 6201118 Bind_1408 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832537.1 1619533 D 395963 CDS YP_001832538.1 182678392 6199944 complement(1620584..1621873) 1 NC_010581.1 KEGG: azc:AZC_1710 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 1621873 6199944 Bind_1409 Beijerinckia indica subsp. indica ATCC 9039 citrate synthase I YP_001832538.1 1620584 R 395963 CDS YP_001832539.1 182678393 6201052 complement(1622028..1623449) 1 NC_010581.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1623449 gltX 6201052 gltX Beijerinckia indica subsp. indica ATCC 9039 glutamyl-tRNA synthetase YP_001832539.1 1622028 R 395963 CDS YP_001832540.1 182678394 6199249 1623715..1626093 1 NC_010581.1 PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein; ComEC/Rec2-like protein 1626093 6199249 Bind_1411 Beijerinckia indica subsp. indica ATCC 9039 ComEC/Rec2-like protein YP_001832540.1 1623715 D 395963 CDS YP_001832541.1 182678395 6199687 1626181..1626483 1 NC_010581.1 KEGG: bcs:BCAN_A1554 hypothetical protein; hypothetical protein 1626483 6199687 Bind_1412 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832541.1 1626181 D 395963 CDS YP_001832542.1 182678396 6200599 complement(1626612..1627325) 1 NC_010581.1 PFAM: glutamine amidotransferase class-I; KEGG: rru:Rru_A3512 glutamine amidotransferase; glutamine amidotransferase 1627325 6200599 Bind_1413 Beijerinckia indica subsp. indica ATCC 9039 glutamine amidotransferase YP_001832542.1 1626612 R 395963 CDS YP_001832543.1 182678397 6199357 complement(1627376..1627963) 1 NC_010581.1 PFAM: Phosphoglycerate mutase; KEGG: ret:RHE_PF00323 putative phosphoglycerate mutase protein; phosphoglycerate mutase 1627963 6199357 Bind_1414 Beijerinckia indica subsp. indica ATCC 9039 phosphoglycerate mutase YP_001832543.1 1627376 R 395963 CDS YP_001832544.1 182678398 6199934 1628143..1628772 1 NC_010581.1 PFAM: transcriptional regulator PadR family protein; KEGG: gdi:GDI0892 putative transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 1628772 6199934 Bind_1415 Beijerinckia indica subsp. indica ATCC 9039 PadR-like family transcriptional regulator YP_001832544.1 1628143 D 395963 CDS YP_001832545.1 182678399 6201560 1628945..1629781 1 NC_010581.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: bmt:BSUIS_A1189 indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 1629781 6201560 Bind_1416 Beijerinckia indica subsp. indica ATCC 9039 indole-3-glycerol-phosphate synthase YP_001832545.1 1628945 D 395963 CDS YP_001832546.1 182678400 6199336 1629792..1630274 1 NC_010581.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mlo:mlr0616 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 1630274 6199336 Bind_1417 Beijerinckia indica subsp. indica ATCC 9039 molybdenum cofactor biosynthesis protein C YP_001832546.1 1629792 D 395963 CDS YP_001832547.1 182678401 6199486 1630271..1631551 1 NC_010581.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 1631551 6199486 Bind_1418 Beijerinckia indica subsp. indica ATCC 9039 molybdenum cofactor synthesis domain-containing protein YP_001832547.1 1630271 D 395963 CDS YP_001832548.1 182678402 6200426 1631723..1632436 1 NC_010581.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1632436 6200426 Bind_1419 Beijerinckia indica subsp. indica ATCC 9039 LexA repressor YP_001832548.1 1631723 D 395963 CDS YP_001832549.1 182678403 6201051 1632660..1632899 1 NC_010581.1 hypothetical protein 1632899 6201051 Bind_1420 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832549.1 1632660 D 395963 CDS YP_001832550.1 182678404 6199284 1633039..1633380 1 NC_010581.1 hypothetical protein 1633380 6199284 Bind_1421 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832550.1 1633039 D 395963 CDS YP_001832551.1 182678405 6199913 1633663..1634763 1 NC_010581.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ppd:Ppro_2287 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1634763 6199913 Bind_1422 Beijerinckia indica subsp. indica ATCC 9039 cobyrinic acid ac-diamide synthase YP_001832551.1 1633663 D 395963 CDS YP_001832552.1 182678406 6199546 1634760..1635488 1 NC_010581.1 PFAM: RelA/SpoT domain protein; KEGG: ppd:Ppro_2286 RelA/SpoT domain protein; RelA/SpoT domain-containing protein 1635488 6199546 Bind_1423 Beijerinckia indica subsp. indica ATCC 9039 RelA/SpoT domain-containing protein YP_001832552.1 1634760 D 395963 CDS YP_001832553.1 182678407 6200781 1635708..1636565 1 NC_010581.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ppr:PBPRA1334 hypothetical protein; HNH endonuclease 1636565 6200781 Bind_1424 Beijerinckia indica subsp. indica ATCC 9039 HNH endonuclease YP_001832553.1 1635708 D 395963 CDS YP_001832554.1 182678408 6199126 complement(1636802..1637221) 1 NC_010581.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rpa:RPA1907 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1637221 6199126 Bind_1425 Beijerinckia indica subsp. indica ATCC 9039 glutathione-dependent formaldehyde-activating protein YP_001832554.1 1636802 R 395963 CDS YP_001832555.1 182678409 6201211 1637465..1638385 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_2291 transcriptional regulator, LysR family; LysR family transcriptional regulator 1638385 6201211 Bind_1426 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832555.1 1637465 D 395963 CDS YP_001832556.1 182678410 6198669 1638382..1639719 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2144 major facilitator superfamily MFS_1; major facilitator transporter 1639719 6198669 Bind_1427 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832556.1 1638382 D 395963 CDS YP_001832557.1 182678411 6199017 complement(1639800..1639991) 1 NC_010581.1 hypothetical protein 1639991 6199017 Bind_1428 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832557.1 1639800 R 395963 CDS YP_001832558.1 182678412 6199020 1640192..1640524 1 NC_010581.1 KEGG: bxe:Bxe_B0588 hypothetical protein; hypothetical protein 1640524 6199020 Bind_1429 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832558.1 1640192 D 395963 CDS YP_001832559.1 182678413 6200068 1640590..1641513 1 NC_010581.1 PFAM: protein of unknown function DUF692; KEGG: bxe:Bxe_B0587 hypothetical protein; hypothetical protein 1641513 6200068 Bind_1430 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832559.1 1640590 D 395963 CDS YP_001832560.1 182678414 6198924 1641510..1642364 1 NC_010581.1 KEGG: bxe:Bxe_B0585 hypothetical protein; hypothetical protein 1642364 6198924 Bind_1431 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832560.1 1641510 D 395963 CDS YP_001832561.1 182678415 6199162 1642361..1642888 1 NC_010581.1 PFAM: DoxX family protein; KEGG: bxe:Bxe_B0584 hypothetical protein; DoxX family protein 1642888 6199162 Bind_1432 Beijerinckia indica subsp. indica ATCC 9039 DoxX family protein YP_001832561.1 1642361 D 395963 CDS YP_001832562.1 182678416 6198990 1642961..1643611 1 NC_010581.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: nha:Nham_4645 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 1643611 6198990 Bind_1433 Beijerinckia indica subsp. indica ATCC 9039 ECF subfamily RNA polymerase sigma-24 factor YP_001832562.1 1642961 D 395963 CDS YP_001832563.1 182678417 6199869 1643611..1644267 1 NC_010581.1 KEGG: nha:Nham_4644 hypothetical protein; hypothetical protein 1644267 6199869 Bind_1434 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832563.1 1643611 D 395963 CDS YP_001832564.1 182678418 6199003 complement(1644563..1645429) 1 NC_010581.1 PFAM: beta-lactamase; KEGG: gbe:GbCGDNIH1_1173 beta-lactamase; Beta-lactamase 1645429 6199003 Bind_1435 Beijerinckia indica subsp. indica ATCC 9039 Beta-lactamase YP_001832564.1 1644563 R 395963 CDS YP_001832565.1 182678419 6199278 complement(1645771..1646688) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1311 putative transcriptional regulator; LysR family transcriptional regulator 1646688 6199278 Bind_1436 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832565.1 1645771 R 395963 CDS YP_001832566.1 182678420 6201166 1646822..1647370 1 NC_010581.1 KEGG: azc:AZC_1312 hypothetical protein; hypothetical protein 1647370 6201166 Bind_1437 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832566.1 1646822 D 395963 CDS YP_001832567.1 182678421 6198508 1647367..1647507 1 NC_010581.1 hypothetical protein 1647507 6198508 Bind_1438 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832567.1 1647367 D 395963 CDS YP_001832568.1 182678422 6200015 1647634..1648500 1 NC_010581.1 KEGG: bra:BRADO6401 hypothetical protein; hypothetical protein 1648500 6200015 Bind_1439 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832568.1 1647634 D 395963 CDS YP_001832569.1 182678423 6199883 1648762..1649229 1 NC_010581.1 KEGG: smd:Smed_5100 hypothetical protein; hypothetical protein 1649229 6199883 Bind_1441 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832569.1 1648762 D 395963 CDS YP_001832570.1 182678424 6199282 1649226..1649771 1 NC_010581.1 PFAM: RES domain protein; KEGG: mlo:mll9650 hypothetical protein; RES domain-containing protein 1649771 6199282 Bind_1442 Beijerinckia indica subsp. indica ATCC 9039 RES domain-containing protein YP_001832570.1 1649226 D 395963 CDS YP_001832571.1 182678425 6200407 complement(1649788..1651383) 1 NC_010581.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nwi:Nwi_2276 Fe-S oxidoreductase; radical SAM domain-containing protein 1651383 6200407 Bind_1443 Beijerinckia indica subsp. indica ATCC 9039 radical SAM domain-containing protein YP_001832571.1 1649788 R 395963 CDS YP_001832572.1 182678426 6199358 complement(1651615..1652643) 1 NC_010581.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1652643 trpD 6199358 trpD Beijerinckia indica subsp. indica ATCC 9039 anthranilate phosphoribosyltransferase YP_001832572.1 1651615 R 395963 CDS YP_001832573.1 182678427 6201202 complement(1652653..1653267) 1 NC_010581.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 1653267 6201202 Bind_1445 Beijerinckia indica subsp. indica ATCC 9039 glutamine amidotransferase of anthranilate synthase YP_001832573.1 1652653 R 395963 CDS YP_001832574.1 182678428 6198890 1653554..1654102 1 NC_010581.1 KEGG: pde:Pden_1711 hypothetical protein; hypothetical protein 1654102 6198890 Bind_1446 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832574.1 1653554 D 395963 CDS YP_001832575.1 182678429 6199765 complement(1654236..1655336) 1 NC_010581.1 PFAM: Choloylglycine hydrolase; KEGG: oan:Oant_1703 penicillin amidase; choloylglycine hydrolase 1655336 6199765 Bind_1447 Beijerinckia indica subsp. indica ATCC 9039 choloylglycine hydrolase YP_001832575.1 1654236 R 395963 CDS YP_001832576.1 182678430 6199865 complement(1655541..1657061) 1 NC_010581.1 KEGG: azc:AZC_2208 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; anthranilate synthase component I 1657061 6199865 Bind_1448 Beijerinckia indica subsp. indica ATCC 9039 anthranilate synthase component I YP_001832576.1 1655541 R 395963 CDS YP_001832577.1 182678431 6200225 complement(1657133..1659055) 1 NC_010581.1 KEGG: rpc:RPC_2468 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1659055 6200225 Bind_1449 Beijerinckia indica subsp. indica ATCC 9039 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001832577.1 1657133 R 395963 CDS YP_001832578.1 182678432 6199876 1659311..1660069 1 NC_010581.1 PFAM: triosephosphate isomerase; KEGG: nwi:Nwi_1835 triosephosphate isomerase; Triose-phosphate isomerase 1660069 6199876 Bind_1450 Beijerinckia indica subsp. indica ATCC 9039 Triose-phosphate isomerase YP_001832578.1 1659311 D 395963 CDS YP_001832579.1 182678433 6199611 1660298..1660717 1 NC_010581.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 1660717 6199611 Bind_1451 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit SecG YP_001832579.1 1660298 D 395963 CDS YP_001832580.1 182678434 6200399 1660860..1662488 1 NC_010581.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1662488 pyrG 6200399 pyrG Beijerinckia indica subsp. indica ATCC 9039 CTP synthetase YP_001832580.1 1660860 D 395963 CDS YP_001832581.1 182678435 6199854 complement(1662879..1663769) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2638 transcriptional regulator, LysR family; LysR family transcriptional regulator 1663769 6199854 Bind_1454 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832581.1 1662879 R 395963 CDS YP_001832582.1 182678436 6200773 1663928..1664248 1 NC_010581.1 KEGG: bch:Bcen2424_5410 hypothetical protein; hypothetical protein 1664248 6200773 Bind_1455 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832582.1 1663928 D 395963 CDS YP_001832583.1 182678437 6200104 1664272..1665018 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr7057 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 1665018 6200104 Bind_1456 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832583.1 1664272 D 395963 CDS YP_001832584.1 182678438 6198519 complement(1665546..1666526) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ret:RHE_CH02989 hypothetical protein; NAD-dependent epimerase/dehydratase 1666526 6198519 Bind_1458 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001832584.1 1665546 R 395963 CDS YP_001832585.1 182678439 6199800 1666629..1667570 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc3334 probable transcription regulator protein; LysR family transcriptional regulator 1667570 6199800 Bind_1459 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832585.1 1666629 D 395963 CDS YP_001832586.1 182678440 6199044 1667703..1667945 1 NC_010581.1 hypothetical protein 1667945 6199044 Bind_1460 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832586.1 1667703 D 395963 CDS YP_001832587.1 182678441 6199498 complement(1668349..1668648) 1 NC_010581.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; KEGG: bbt:BBta_4472 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase 1668648 6199498 Bind_1461 Beijerinckia indica subsp. indica ATCC 9039 7-cyano-7-deazaguanine reductase YP_001832587.1 1668349 R 395963 CDS YP_001832588.1 182678442 6200798 complement(1669102..1669629) 1 NC_010581.1 hypothetical protein 1669629 6200798 Bind_1462 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832588.1 1669102 R 395963 CDS YP_001832589.1 182678443 6201091 complement(1669788..1670246) 1 NC_010581.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1670246 6201091 Bind_1463 Beijerinckia indica subsp. indica ATCC 9039 7-cyano-7-deazaguanine reductase YP_001832589.1 1669788 R 395963 CDS YP_001832590.1 182678444 6199253 1670665..1671297 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_5351 putative transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 1671297 6199253 Bind_1464 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832590.1 1670665 D 395963 CDS YP_001832591.1 182678445 6200548 complement(1671311..1672195) 1 NC_010581.1 PFAM: Lytic transglycosylase catalytic; KEGG: rpc:RPC_2909 lytic transglycosylase, catalytic; lytic transglycosylase 1672195 6200548 Bind_1465 Beijerinckia indica subsp. indica ATCC 9039 lytic transglycosylase YP_001832591.1 1671311 R 395963 CDS YP_001832592.1 182678446 6200853 1672577..1673860 1 NC_010581.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1673860 eno 6200853 eno Beijerinckia indica subsp. indica ATCC 9039 phosphopyruvate hydratase YP_001832592.1 1672577 D 395963 CDS YP_001832593.1 182678447 6201371 complement(1675030..1675863) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: smd:Smed_1211 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1675863 6201371 Bind_1468 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832593.1 1675030 R 395963 CDS YP_001832594.1 182678448 6199040 complement(1675881..1676408) 1 NC_010581.1 KEGG: ret:RHE_CH02036 hypothetical protein; hypothetical protein 1676408 6199040 Bind_1469 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832594.1 1675881 R 395963 CDS YP_001832595.1 182678449 6199547 complement(1676453..1677268) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 short chain dehydrogenase; short chain dehydrogenase 1677268 6199547 Bind_1470 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001832595.1 1676453 R 395963 CDS YP_001832596.1 182678450 6198832 complement(1677326..1677727) 1 NC_010581.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein; hypothetical protein 1677727 6198832 Bind_1471 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832596.1 1677326 R 395963 CDS YP_001832597.1 182678451 6200858 complement(1677889..1678767) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ret:RHE_CH02039 probable transcriptional regulator protein, AraC family; AraC family transcriptional regulator 1678767 6200858 Bind_1472 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001832597.1 1677889 R 395963 CDS YP_001832598.1 182678452 6200312 1680202..1680900 1 NC_010581.1 PFAM: ThiJ/PfpI domain protein; KEGG: acr:Acry_0492 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1680900 6200312 Bind_1474 Beijerinckia indica subsp. indica ATCC 9039 ThiJ/PfpI domain-containing protein YP_001832598.1 1680202 D 395963 CDS YP_001832599.1 182678453 6198925 1680902..1681369 1 NC_010581.1 PFAM: protein of unknown function DUF1348; KEGG: bmu:Bmul_5318 protein of unknown function DUF1348; hypothetical protein 1681369 6198925 Bind_1475 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832599.1 1680902 D 395963 CDS YP_001832600.1 182678454 6199399 complement(1681462..1682499) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH02414 probable epoxide hydrolase protein; alpha/beta hydrolase fold protein 1682499 6199399 Bind_1476 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832600.1 1681462 R 395963 CDS YP_001832601.1 182678455 6198404 complement(1682526..1683494) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_3671 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 1683494 6198404 Bind_1477 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001832601.1 1682526 R 395963 CDS YP_001832602.1 182678456 6198988 complement(1683548..1684114) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_3672 transcriptional regulator, TetR family; TetR family transcriptional regulator 1684114 6198988 Bind_1478 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832602.1 1683548 R 395963 CDS YP_001832603.1 182678457 6198764 complement(1685026..1685778) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: esa:ESA_01962 hypothetical protein; short-chain dehydrogenase/reductase SDR 1685778 6198764 Bind_1480 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832603.1 1685026 R 395963 CDS YP_001832604.1 182678458 6199144 1685893..1686798 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: esa:ESA_01963 hypothetical protein; LysR family transcriptional regulator 1686798 6199144 Bind_1481 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832604.1 1685893 D 395963 CDS YP_001832605.1 182678459 6199896 1687070..1687411 1 NC_010581.1 PFAM: Protein of unknown function DUF1778; KEGG: rpa:RPA3583 hypothetical protein; hypothetical protein 1687411 6199896 Bind_1482 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832605.1 1687070 D 395963 CDS YP_001832606.1 182678460 6199275 complement(1687950..1688909) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpa:RPA1804 hypothetical protein; NAD-dependent epimerase/dehydratase 1688909 6199275 Bind_1484 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001832606.1 1687950 R 395963 CDS YP_001832607.1 182678461 6201186 1688964..1689908 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA1805 transcriptional regulator, LysR family; LysR family transcriptional regulator 1689908 6201186 Bind_1485 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832607.1 1688964 D 395963 CDS YP_001832608.1 182678462 6198518 complement(1689959..1690855) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: sus:Acid_6732 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1690855 6198518 Bind_1486 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001832608.1 1689959 R 395963 CDS YP_001832609.1 182678463 6201308 1690952..1691782 1 NC_010581.1 SMART: helix-turn-helix domain protein; KEGG: bmu:Bmul_1288 transcriptional regulator, XRE family; XRE family transcriptional regulator 1691782 6201308 Bind_1487 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001832609.1 1690952 D 395963 CDS YP_001832610.1 182678464 6200517 complement(1691797..1692405) 1 NC_010581.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: hch:HCH_03333 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 1692405 6200517 Bind_1488 Beijerinckia indica subsp. indica ATCC 9039 NAD(P)H dehydrogenase (quinone) YP_001832610.1 1691797 R 395963 CDS YP_001832611.1 182678465 6199838 complement(1692410..1692847) 1 NC_010581.1 KEGG: sal:Sala_0092 hypothetical protein; hypothetical protein 1692847 6199838 Bind_1489 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832611.1 1692410 R 395963 CDS YP_001832612.1 182678466 6199985 1692965..1693360 1 NC_010581.1 PFAM: helix-turn-helix HxlR type; KEGG: fre:Franean1_4812 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1693360 6199985 Bind_1490 Beijerinckia indica subsp. indica ATCC 9039 HxlR family transcriptional regulator YP_001832612.1 1692965 D 395963 CDS YP_001832613.1 182678467 6200531 complement(1693468..1693725) 1 NC_010581.1 KEGG: cme:CMK267C hypothetical protein Pfam: DUF1640 HTH_10 PROSITE: GLY_RICH; hypothetical protein 1693725 6200531 Bind_1491 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832613.1 1693468 R 395963 CDS YP_001832614.1 182678468 6201197 1694152..1694826 1 NC_010581.1 KEGG: aor:AO090023000157 predicted protein Pfam: SGL; hypothetical protein 1694826 6201197 Bind_1492 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832614.1 1694152 D 395963 CDS YP_001832615.1 182678469 6199699 1694795..1695178 1 NC_010581.1 KEGG: ana:all0351 unknown protein; hypothetical protein 1695178 6199699 Bind_1493 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832615.1 1694795 D 395963 CDS YP_001832616.1 182678470 6201174 1695280..1695921 1 NC_010581.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_0928 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1695921 6201174 Bind_1494 Beijerinckia indica subsp. indica ATCC 9039 carboxymuconolactone decarboxylase YP_001832616.1 1695280 D 395963 CDS YP_001832617.1 182678471 6200850 1696000..1696500 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: mxa:MXAN_1760 transcriptional regulator, MarR family; MarR family transcriptional regulator 1696500 6200850 Bind_1495 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001832617.1 1696000 D 395963 CDS YP_001832618.1 182678472 6199663 1696841..1697110 1 NC_010581.1 PFAM: protein of unknown function DUF1044; KEGG: mex:Mext_1502 protein of unknown function DUF1044; hypothetical protein 1697110 6199663 Bind_1496 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832618.1 1696841 D 395963 CDS YP_001832619.1 182678473 6201048 1697094..1697417 1 NC_010581.1 SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1503 putative DNA-binding protein; XRE family transcriptional regulator 1697417 6201048 Bind_1497 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001832619.1 1697094 D 395963 CDS YP_001832620.1 182678474 6201044 1697458..1697721 1 NC_010581.1 KEGG: noc:Noc_1294 hypothetical protein; hypothetical protein 1697721 6201044 Bind_1498 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832620.1 1697458 D 395963 CDS YP_001832621.1 182678475 6201224 1698127..1699329 1 NC_010581.1 KEGG: xcb:XC_2635 hypothetical protein; hypothetical protein 1699329 6201224 Bind_1499 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832621.1 1698127 D 395963 CDS YP_001832622.1 182678476 6201483 1699310..1699813 1 NC_010581.1 KEGG: mag:amb1133 hypothetical protein; hypothetical protein 1699813 6201483 Bind_1500 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832622.1 1699310 D 395963 CDS YP_001832623.1 182678477 6200019 1699810..1701729 1 NC_010581.1 KEGG: bps:BPSL0770 hypothetical protein; hypothetical protein 1701729 6200019 Bind_1501 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832623.1 1699810 D 395963 CDS YP_001832624.1 182678478 6199868 complement(1701884..1702372) 1 NC_010581.1 PFAM: heat shock protein DnaJ domain protein; KEGG: xau:Xaut_2284 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1702372 6199868 Bind_1502 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein DnaJ domain-containing protein YP_001832624.1 1701884 R 395963 CDS YP_001832625.1 182678479 6199481 1702605..1704173 1 NC_010581.1 KEGG: bra:BRADO0256 putative alkaline phosphatase (PhoD); putative signal peptide; putative alkaline phosphatase (PhoD); putative signal peptide 1704173 6199481 Bind_1503 Beijerinckia indica subsp. indica ATCC 9039 putative alkaline phosphatase (PhoD); putative signal peptide YP_001832625.1 1702605 D 395963 CDS YP_001832626.1 182678480 6200400 1704253..1704573 1 NC_010581.1 PFAM: Septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator; septum formation initiator 1704573 6200400 Bind_1504 Beijerinckia indica subsp. indica ATCC 9039 septum formation initiator YP_001832626.1 1704253 D 395963 CDS YP_001832627.1 182678481 6201357 1704815..1705852 1 NC_010581.1 KEGG: smd:Smed_1076 dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 1705852 6201357 Bind_1505 Beijerinckia indica subsp. indica ATCC 9039 pyruvate dehydrogenase E1 component subunit alpha YP_001832627.1 1704815 D 395963 CDS YP_001832628.1 182678482 6200442 1706049..1707425 1 NC_010581.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1707425 6200442 Bind_1506 Beijerinckia indica subsp. indica ATCC 9039 pyruvate dehydrogenase subunit beta YP_001832628.1 1706049 D 395963 CDS YP_001832629.1 182678483 6200327 1707450..1708808 1 NC_010581.1 KEGG: ret:RHE_CH01935 dihydrolipoamide acetyltransferase protein; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1708808 6200327 Bind_1507 Beijerinckia indica subsp. indica ATCC 9039 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001832629.1 1707450 D 395963 CDS YP_001832630.1 182678484 6201034 1708860..1710302 1 NC_010581.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1710302 6201034 Bind_1508 Beijerinckia indica subsp. indica ATCC 9039 dihydrolipoamide dehydrogenase YP_001832630.1 1708860 D 395963 CDS YP_001832631.1 182678485 6201039 1710367..1711344 1 NC_010581.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1711344 6201039 Bind_1509 Beijerinckia indica subsp. indica ATCC 9039 lipoyl synthase YP_001832631.1 1710367 D 395963 CDS YP_001832632.1 182678486 6200519 complement(1711370..1711855) 1 NC_010581.1 PFAM: RES domain protein; KEGG: reh:H16_B1263 hypothetical membrane protein; RES domain-containing protein 1711855 6200519 Bind_1510 Beijerinckia indica subsp. indica ATCC 9039 RES domain-containing protein YP_001832632.1 1711370 R 395963 CDS YP_001832633.1 182678487 6201818 complement(1711852..1712340) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: acr:Acry_3436 hypothetical protein; hypothetical protein 1712340 6201818 Bind_1511 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832633.1 1711852 R 395963 CDS YP_001832634.1 182678488 6199950 1712430..1712888 1 NC_010581.1 PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase; cyclase/dehydrase 1712888 6199950 Bind_1512 Beijerinckia indica subsp. indica ATCC 9039 cyclase/dehydrase YP_001832634.1 1712430 D 395963 CDS YP_001832635.1 182678489 6198162 complement(1712896..1714068) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0831 hypothetical protein; major facilitator transporter 1714068 6198162 Bind_1513 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832635.1 1712896 R 395963 CDS YP_001832636.1 182678490 6199626 complement(1714188..1714691) 1 NC_010581.1 PFAM: CinA domain protein; KEGG: mmr:Mmar10_1438 CinA domain protein; CinA domain-containing protein 1714691 6199626 Bind_1514 Beijerinckia indica subsp. indica ATCC 9039 CinA domain-containing protein YP_001832636.1 1714188 R 395963 CDS YP_001832637.1 182678491 6200061 complement(1714688..1715416) 1 NC_010581.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ava:Ava_3671 haloacid dehalogenase-like hydrolase; hydrolase 1715416 6200061 Bind_1515 Beijerinckia indica subsp. indica ATCC 9039 hydrolase YP_001832637.1 1714688 R 395963 CDS YP_001832638.1 182678492 6200887 complement(1715484..1716710) 1 NC_010581.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: nha:Nham_1834 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1716710 6200887 Bind_1516 Beijerinckia indica subsp. indica ATCC 9039 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001832638.1 1715484 R 395963 CDS YP_001832639.1 182678493 6199871 1716935..1717987 1 NC_010581.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rpe:RPE_2756 putative TIM-barrel protein, nifR3 family; NifR3 family TIM-barrel protein 1717987 6199871 Bind_1517 Beijerinckia indica subsp. indica ATCC 9039 NifR3 family TIM-barrel protein YP_001832639.1 1716935 D 395963 CDS YP_001832640.1 182678494 6201341 1717984..1719159 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: xau:Xaut_4400 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 1719159 6201341 Bind_1518 Beijerinckia indica subsp. indica ATCC 9039 signal transduction histidine kinase, nitrogen specific, NtrB YP_001832640.1 1717984 D 395963 CDS YP_001832641.1 182678495 6199968 1719273..1720754 1 NC_010581.1 KEGG: xau:Xaut_4399 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 1720754 6199968 Bind_1519 Beijerinckia indica subsp. indica ATCC 9039 nitrogen metabolism transcriptional regulator NtrC YP_001832641.1 1719273 D 395963 CDS YP_001832642.1 182678496 6199112 1720870..1723143 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: mex:Mext_2822 PAS sensor protein; multi-sensor signal transduction histidine kinase 1723143 6199112 Bind_1520 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor signal transduction histidine kinase YP_001832642.1 1720870 D 395963 CDS YP_001832643.1 182678497 6199459 1723334..1724701 1 NC_010581.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein; two component, sigma54 specific, Fis family transcriptional regulator 1724701 6199459 Bind_1521 Beijerinckia indica subsp. indica ATCC 9039 two component, sigma54 specific, Fis family transcriptional regulator YP_001832643.1 1723334 D 395963 CDS YP_001832644.1 182678498 6199196 1724754..1725320 1 NC_010581.1 PFAM: Chromate transporter; KEGG: reu:Reut_A2355 chromate transporter; chromate transporter 1725320 6199196 Bind_1522 Beijerinckia indica subsp. indica ATCC 9039 chromate transporter YP_001832644.1 1724754 D 395963 CDS YP_001832645.1 182678499 6200278 1725317..1725841 1 NC_010581.1 PFAM: Chromate transporter; KEGG: rso:RSc0980 probable transmembrane protein; chromate transporter 1725841 6200278 Bind_1523 Beijerinckia indica subsp. indica ATCC 9039 chromate transporter YP_001832645.1 1725317 D 395963 CDS YP_001832646.1 182678500 6200317 1726064..1726924 1 NC_010581.1 PFAM: aminotransferase class IV; KEGG: mes:Meso_1614 aminotransferase, class IV; class IV aminotransferase 1726924 6200317 Bind_1524 Beijerinckia indica subsp. indica ATCC 9039 class IV aminotransferase YP_001832646.1 1726064 D 395963 CDS YP_001832647.1 182678501 6200304 1727075..1727329 1 NC_010581.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: xau:Xaut_4393 RNA chaperone Hfq; RNA chaperone Hfq 1727329 6200304 Bind_1525 Beijerinckia indica subsp. indica ATCC 9039 RNA chaperone Hfq YP_001832647.1 1727075 D 395963 CDS YP_001832648.1 182678502 6200730 1727458..1728858 1 NC_010581.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_0068 GTP-binding protein HflX; GTP-binding proten HflX 1728858 6200730 Bind_1526 Beijerinckia indica subsp. indica ATCC 9039 GTP-binding proten HflX YP_001832648.1 1727458 D 395963 CDS YP_001832649.1 182678503 6199761 complement(1728847..1729755) 1 NC_010581.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: xau:Xaut_4391 MazG family protein; MazG family protein 1729755 6199761 Bind_1527 Beijerinckia indica subsp. indica ATCC 9039 MazG family protein YP_001832649.1 1728847 R 395963 CDS YP_001832650.1 182678504 6199829 complement(1729777..1730451) 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: xau:Xaut_0192 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1730451 6199829 Bind_1528 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001832650.1 1729777 R 395963 CDS YP_001832651.1 182678505 6200922 complement(1730957..1733353) 1 NC_010581.1 PFAM: Transketolase central region; KEGG: mlo:mlr9539 pyruvate dehydrogenase E1 component homolog; transketolase central region 1733353 6200922 Bind_1529 Beijerinckia indica subsp. indica ATCC 9039 transketolase central region YP_001832651.1 1730957 R 395963 CDS YP_001832652.1 182678506 6201480 1733488..1733961 1 NC_010581.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll9538 transcriptional regulator homolog; AsnC family transcriptional regulator 1733961 6201480 Bind_1530 Beijerinckia indica subsp. indica ATCC 9039 AsnC family transcriptional regulator YP_001832652.1 1733488 D 395963 CDS YP_001832653.1 182678507 6200490 complement(1734006..1735670) 1 NC_010581.1 KEGG: bpt:Bpet4207 ABC transporter ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter 1735670 6200490 Bind_1531 Beijerinckia indica subsp. indica ATCC 9039 cyclic peptide transporter YP_001832653.1 1734006 R 395963 CDS YP_001832654.1 182678508 6200728 complement(1735786..1736583) 1 NC_010581.1 KEGG: azc:AZC_2264 metal-dependent hydrolase; metal-dependent hydrolase 1736583 6200728 Bind_1532 Beijerinckia indica subsp. indica ATCC 9039 metal-dependent hydrolase YP_001832654.1 1735786 R 395963 CDS YP_001832655.1 182678509 6200886 complement(1736580..1737395) 1 NC_010581.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mlo:mll0418 hypothetical protein; TatD family hydrolase 1737395 6200886 Bind_1533 Beijerinckia indica subsp. indica ATCC 9039 TatD family hydrolase YP_001832655.1 1736580 R 395963 CDS YP_001832656.1 182678510 6201260 complement(1737398..1738990) 1 NC_010581.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: bov:BOV_0962 methionyl-tRNA synthetase; methionyl-tRNA synthetase 1738990 6201260 Bind_1534 Beijerinckia indica subsp. indica ATCC 9039 methionyl-tRNA synthetase YP_001832656.1 1737398 R 395963 CDS YP_001832657.1 182678511 6199482 complement(1739092..1740210) 1 NC_010581.1 KEGG: azc:AZC_2174 putative DNA polymerase III delta prime subunit; putative DNA polymerase III delta prime subunit 1740210 6199482 Bind_1535 Beijerinckia indica subsp. indica ATCC 9039 putative DNA polymerase III delta prime subunit YP_001832657.1 1739092 R 395963 CDS YP_001832658.1 182678512 6200937 complement(1740200..1740913) 1 NC_010581.1 PFAM: thymidylate kinase; KEGG: xau:Xaut_4325 dTMP kinase; dTMP kinase 1740913 6200937 Bind_1536 Beijerinckia indica subsp. indica ATCC 9039 dTMP kinase YP_001832658.1 1740200 R 395963 CDS YP_001832659.1 182678513 6199662 complement(1740910..1742094) 1 NC_010581.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 1742094 6199662 Bind_1537 Beijerinckia indica subsp. indica ATCC 9039 serine-type D-Ala-D-Ala carboxypeptidase YP_001832659.1 1740910 R 395963 CDS YP_001832660.1 182678514 6201809 complement(1742261..1743412) 1 NC_010581.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bcs:BCAN_A1007 rare lipoprotein A; rare lipoprotein A 1743412 6201809 Bind_1538 Beijerinckia indica subsp. indica ATCC 9039 rare lipoprotein A YP_001832660.1 1742261 R 395963 CDS YP_001832661.1 182678515 6201160 1743831..1744163 1 NC_010581.1 KEGG: mca:MCA2292 hypothetical protein; hypothetical protein 1744163 6201160 Bind_1539 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832661.1 1743831 D 395963 CDS YP_001832662.1 182678516 6200144 1744160..1744606 1 NC_010581.1 hypothetical protein 1744606 6200144 Bind_1540 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832662.1 1744160 D 395963 CDS YP_001832663.1 182678517 6201142 1745077..1745448 1 NC_010581.1 KEGG: bvi:Bcep1808_7672 hypothetical protein; hypothetical protein 1745448 6201142 Bind_1541 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832663.1 1745077 D 395963 CDS YP_001832664.1 182678518 6199573 1745516..1745842 1 NC_010581.1 KEGG: bxe:Bxe_A0211 hypothetical protein; hypothetical protein 1745842 6199573 Bind_1542 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832664.1 1745516 D 395963 CDS YP_001832665.1 182678519 6198613 1745839..1746942 1 NC_010581.1 KEGG: bxe:Bxe_A0212 hypothetical protein; hypothetical protein 1746942 6198613 Bind_1543 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832665.1 1745839 D 395963 CDS YP_001832666.1 182678520 6199660 complement(1746939..1747850) 1 NC_010581.1 KEGG: bxe:Bxe_A0213 hypothetical protein; hypothetical protein 1747850 6199660 Bind_1544 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832666.1 1746939 R 395963 CDS YP_001832667.1 182678521 6201312 complement(1747828..1748856) 1 NC_010581.1 PFAM: thymidylate synthase; KEGG: bxe:Bxe_A0214 putative thymidylate synthase; thymidylate synthase 1748856 6201312 Bind_1545 Beijerinckia indica subsp. indica ATCC 9039 thymidylate synthase YP_001832667.1 1747828 R 395963 CDS YP_001832668.1 182678522 6200341 1749166..1749525 1 NC_010581.1 KEGG: swi:Swit_4942 hypothetical protein; hypothetical protein 1749525 6200341 Bind_1546 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832668.1 1749166 D 395963 CDS YP_001832669.1 182678523 6199820 1749522..1750286 1 NC_010581.1 KEGG: swi:Swit_4943 hypothetical protein; hypothetical protein 1750286 6199820 Bind_1547 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832669.1 1749522 D 395963 CDS YP_001832670.1 182678524 6200787 1750537..1751493 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rle:RL1232 putative AraC family transcriptional regulator; AraC family transcriptional regulator 1751493 6200787 Bind_1549 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001832670.1 1750537 D 395963 CDS YP_001832671.1 182678525 6200892 complement(1751843..1752148) 1 NC_010581.1 PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit conserved region; ETC complex I subunit 1752148 6200892 Bind_1550 Beijerinckia indica subsp. indica ATCC 9039 ETC complex I subunit YP_001832671.1 1751843 R 395963 CDS YP_001832672.1 182678526 6200083 complement(1752424..1752894) 1 NC_010581.1 PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 protein of unknown function DUF192; hypothetical protein 1752894 6200083 Bind_1551 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832672.1 1752424 R 395963 CDS YP_001832673.1 182678527 6199376 complement(1753184..1753801) 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 1753801 6199376 Bind_1552 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001832673.1 1753184 R 395963 CDS YP_001832674.1 182678528 6200203 complement(1754022..1754783) 1 NC_010581.1 PFAM: Silent information regulator protein Sir2; KEGG: azc:AZC_1935 silent information regulator protein; silent information regulator protein Sir2 1754783 6200203 Bind_1553 Beijerinckia indica subsp. indica ATCC 9039 silent information regulator protein Sir2 YP_001832674.1 1754022 R 395963 CDS YP_001832675.1 182678529 6199710 1755123..1756664 1 NC_010581.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 1756664 6199710 Bind_1554 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832675.1 1755123 D 395963 CDS YP_001832676.1 182678530 6199328 1756796..1757959 1 NC_010581.1 KEGG: ftn:FTN_0894 GDSL-like lipolytic enzyme; hypothetical protein 1757959 6199328 Bind_1555 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832676.1 1756796 D 395963 CDS YP_001832677.1 182678531 6200204 1758244..1759395 1 NC_010581.1 KEGG: ftn:FTN_0894 GDSL-like lipolytic enzyme; hypothetical protein 1759395 6200204 Bind_1556 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832677.1 1758244 D 395963 CDS YP_001832678.1 182678532 6199108 complement(1759450..1761306) 1 NC_010581.1 PFAM: Carbamoyltransferase; KEGG: mag:amb0035 predicted carbamoyl transferase; carbamoyltransferase 1761306 6199108 Bind_1557 Beijerinckia indica subsp. indica ATCC 9039 carbamoyltransferase YP_001832678.1 1759450 R 395963 CDS YP_001832679.1 182678533 6199850 complement(1761542..1761691) 1 NC_010581.1 KEGG: mag:amb0034 hypothetical protein; hypothetical protein 1761691 6199850 Bind_1558 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832679.1 1761542 R 395963 CDS YP_001832680.1 182678534 6199815 complement(1761701..1762117) 1 NC_010581.1 KEGG: mag:amb0033 hypothetical protein; hypothetical protein 1762117 6199815 Bind_1559 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832680.1 1761701 R 395963 CDS YP_001832681.1 182678535 6199393 complement(1762323..1763165) 1 NC_010581.1 PFAM: histidine biosynthesis protein; Indole-3-glycerol phosphate synthase; KEGG: xau:Xaut_4302 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase 1763165 6199393 Bind_1560 Beijerinckia indica subsp. indica ATCC 9039 indole-3-glycerol-phosphate synthase YP_001832681.1 1762323 R 395963 CDS YP_001832682.1 182678536 6199689 1763466..1763984 1 NC_010581.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: cak:Caul_2872 superoxide dismutase copper/zinc binding; Cu-Zn family superoxide dismutase 1763984 6199689 Bind_1561 Beijerinckia indica subsp. indica ATCC 9039 Cu-Zn family superoxide dismutase YP_001832682.1 1763466 D 395963 CDS YP_001832683.1 182678537 6199805 complement(1763987..1764265) 1 NC_010581.1 KEGG: azc:AZC_2831 hypothetical protein; hypothetical protein 1764265 6199805 Bind_1562 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832683.1 1763987 R 395963 CDS YP_001832684.1 182678538 6200852 complement(1764628..1766460) 1 NC_010581.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: azc:AZC_1851 RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ 1766460 6200852 Bind_1563 Beijerinckia indica subsp. indica ATCC 9039 single-stranded-DNA-specific exonuclease RecJ YP_001832684.1 1764628 R 395963 CDS YP_001832685.1 182678539 6200479 1766607..1767200 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1767200 6200479 Bind_1564 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001832685.1 1766607 D 395963 CDS YP_001832686.1 182678540 6199784 1767256..1767495 1 NC_010581.1 KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; hypothetical protein 1767495 6199784 Bind_1565 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832686.1 1767256 D 395963 CDS YP_001832687.1 182678541 6201193 1767488..1768183 1 NC_010581.1 phosphorylates nucleosides or dinucleosides to make UMP or CMP as part of the pyrimidine salvage pathway; uridine kinase 1768183 6201193 Bind_1566 Beijerinckia indica subsp. indica ATCC 9039 uridine kinase YP_001832687.1 1767488 D 395963 CDS YP_001832688.1 182678542 6200410 complement(1768327..1769844) 1 NC_010581.1 PFAM: Ppx/GppA phosphatase; KEGG: azc:AZC_3665 Ppx/GppA phosphatase; Ppx/GppA phosphatase 1769844 6200410 Bind_1567 Beijerinckia indica subsp. indica ATCC 9039 Ppx/GppA phosphatase YP_001832688.1 1768327 R 395963 CDS YP_001832689.1 182678543 6200982 complement(1769849..1772290) 1 NC_010581.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1772290 6200982 Bind_1568 Beijerinckia indica subsp. indica ATCC 9039 polyphosphate kinase YP_001832689.1 1769849 R 395963 CDS YP_001832690.1 182678544 6201684 complement(1772565..1773083) 1 NC_010581.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bja:bll3178 transcriptional regulatory protein; AsnC family transcriptional regulator 1773083 6201684 Bind_1569 Beijerinckia indica subsp. indica ATCC 9039 AsnC family transcriptional regulator YP_001832690.1 1772565 R 395963 CDS YP_001832691.1 182678545 6201304 1773355..1774476 1 NC_010581.1 TIGRFAM: alanine dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: bja:blr3179 probable alanine dehydrogenase oxidoreductase protein; alanine dehydrogenase 1774476 6201304 Bind_1570 Beijerinckia indica subsp. indica ATCC 9039 alanine dehydrogenase YP_001832691.1 1773355 D 395963 CDS YP_001832692.1 182678546 6199830 complement(1774541..1775140) 1 NC_010581.1 PFAM: nitroreductase; KEGG: gbe:GbCGDNIH1_0027 nitroreductase family protein; nitroreductase 1775140 6199830 Bind_1571 Beijerinckia indica subsp. indica ATCC 9039 nitroreductase YP_001832692.1 1774541 R 395963 CDS YP_001832693.1 182678547 6200273 complement(1775447..1776481) 1 NC_010581.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rru:Rru_A3400 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein 1776481 6200273 Bind_1572 Beijerinckia indica subsp. indica ATCC 9039 sulfate ABC transporter substrate-binding protein YP_001832693.1 1775447 R 395963 CDS YP_001832694.1 182678548 6200814 complement(1776680..1777051) 1 NC_010581.1 PFAM: protein of unknown function DUF37; KEGG: azc:AZC_0945 unknown function protein; hypothetical protein 1777051 6200814 Bind_1573 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832694.1 1776680 R 395963 CDS YP_001832695.1 182678549 6201274 1777454..1778251 1 NC_010581.1 PFAM: MltA-interacting MipA family protein; KEGG: xau:Xaut_1031 MltA-interacting MipA family protein; MltA-interacting MipA family protein 1778251 6201274 Bind_1574 Beijerinckia indica subsp. indica ATCC 9039 MltA-interacting MipA family protein YP_001832695.1 1777454 D 395963 CDS YP_001832696.1 182678550 6200569 complement(1778390..1778869) 1 NC_010581.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like; NifU domain-containing protein 1778869 6200569 Bind_1575 Beijerinckia indica subsp. indica ATCC 9039 NifU domain-containing protein YP_001832696.1 1778390 R 395963 CDS YP_001832697.1 182678551 6200944 1779032..1779673 1 NC_010581.1 PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I; GTP cyclohydrolase I 1779673 6200944 Bind_1576 Beijerinckia indica subsp. indica ATCC 9039 GTP cyclohydrolase I YP_001832697.1 1779032 D 395963 CDS YP_001832698.1 182678552 6199227 complement(1779791..1780462) 1 NC_010581.1 hypothetical protein 1780462 6199227 Bind_1577 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832698.1 1779791 R 395963 CDS YP_001832699.1 182678553 6200183 complement(1780465..1780938) 1 NC_010581.1 hypothetical protein 1780938 6200183 Bind_1578 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832699.1 1780465 R 395963 CDS YP_001832700.1 182678554 6199262 1781250..1781708 1 NC_010581.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1781708 6199262 Bind_1579 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosyl-AMP cyclohydrolase YP_001832700.1 1781250 D 395963 CDS YP_001832701.1 182678555 6201173 complement(1781875..1782306) 1 NC_010581.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain containing protein; signal-transduction protein 1782306 6201173 Bind_1580 Beijerinckia indica subsp. indica ATCC 9039 signal-transduction protein YP_001832701.1 1781875 R 395963 CDS YP_001832702.1 182678556 6200760 complement(1782586..1783353) 1 NC_010581.1 KEGG: rpe:RPE_2658 prepilin-type cleavage/methylation-like protein; hypothetical protein 1783353 6200760 Bind_1581 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832702.1 1782586 R 395963 CDS YP_001832703.1 182678557 6201020 complement(1783373..1784002) 1 NC_010581.1 KEGG: rpe:RPE_2659 prepilin-type cleavage/methylation-like protein; hypothetical protein 1784002 6201020 Bind_1582 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832703.1 1783373 R 395963 CDS YP_001832704.1 182678558 6201339 complement(1783999..1784484) 1 NC_010581.1 KEGG: rpe:RPE_2660 putative general secretion pathway protein H precursor; putative general secretion pathway protein H 1784484 6201339 Bind_1583 Beijerinckia indica subsp. indica ATCC 9039 putative general secretion pathway protein H YP_001832704.1 1783999 R 395963 CDS YP_001832705.1 182678559 6199858 complement(1784478..1784978) 1 NC_010581.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rpe:RPE_2661 general secretion pathway protein G; general secretion pathway protein G 1784978 6199858 Bind_1584 Beijerinckia indica subsp. indica ATCC 9039 general secretion pathway protein G YP_001832705.1 1784478 R 395963 CDS YP_001832706.1 182678560 6200947 complement(1785063..1786259) 1 NC_010581.1 PFAM: type II secretion system protein; KEGG: rpe:RPE_2662 type II secretion system protein; type II secretion system protein 1786259 6200947 Bind_1585 Beijerinckia indica subsp. indica ATCC 9039 type II secretion system protein YP_001832706.1 1785063 R 395963 CDS YP_001832707.1 182678561 6200344 complement(1786460..1788076) 1 NC_010581.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: rpe:RPE_2663 type II secretion system protein E; type II secretion system protein E 1788076 6200344 Bind_1586 Beijerinckia indica subsp. indica ATCC 9039 type II secretion system protein E YP_001832707.1 1786460 R 395963 CDS YP_001832708.1 182678562 6200454 1788396..1790801 1 NC_010581.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpe:RPE_2669 general secretion pathway protein D; general secretion pathway protein D 1790801 6200454 Bind_1587 Beijerinckia indica subsp. indica ATCC 9039 general secretion pathway protein D YP_001832708.1 1788396 D 395963 CDS YP_001832709.1 182678563 6199914 1790811..1791506 1 NC_010581.1 PFAM: peptidase A24A prepilin type IV; KEGG: rpe:RPE_2668 general secretion pathway protein O; peptidase A24A prepilin type IV 1791506 6199914 Bind_1588 Beijerinckia indica subsp. indica ATCC 9039 peptidase A24A prepilin type IV YP_001832709.1 1790811 D 395963 CDS YP_001832710.1 182678564 6199191 1791517..1792365 1 NC_010581.1 KEGG: rpe:RPE_2667 hypothetical protein; hypothetical protein 1792365 6199191 Bind_1589 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832710.1 1791517 D 395963 CDS YP_001832711.1 182678565 6201288 1792373..1793440 1 NC_010581.1 PFAM: Fimbrial assembly family protein; KEGG: rpe:RPE_2666 fimbrial assembly family protein; fimbrial assembly family protein 1793440 6201288 Bind_1590 Beijerinckia indica subsp. indica ATCC 9039 fimbrial assembly family protein YP_001832711.1 1792373 D 395963 CDS YP_001832712.1 182678566 6199749 1793437..1794132 1 NC_010581.1 KEGG: rpe:RPE_2665 hypothetical protein; hypothetical protein 1794132 6199749 Bind_1591 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832712.1 1793437 D 395963 CDS YP_001832713.1 182678567 6200799 1794129..1794572 1 NC_010581.1 KEGG: bja:bll6012 hypothetical protein; hypothetical protein 1794572 6200799 Bind_1592 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832713.1 1794129 D 395963 CDS YP_001832714.1 182678568 6201272 1794655..1795287 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: bbt:BBta_2415 nicotinamidase/pyrazinamidase; isochorismatase hydrolase 1795287 6201272 Bind_1593 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001832714.1 1794655 D 395963 CDS YP_001832715.1 182678569 6199909 1795773..1797317 1 NC_010581.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: mlo:mlr2187 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 1797317 6199909 Bind_1594 Beijerinckia indica subsp. indica ATCC 9039 type I phosphodiesterase/nucleotide pyrophosphatase YP_001832715.1 1795773 D 395963 CDS YP_001832716.1 182678570 6199542 complement(1797670..1799196) 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: nar:Saro_1166 acyltransferase 3; acyltransferase 3 1799196 6199542 Bind_1595 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001832716.1 1797670 R 395963 CDS YP_001832717.1 182678571 6198805 complement(1799336..1802815) 1 NC_010581.1 KEGG: rpe:RPE_2550 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1802815 6198805 Bind_1596 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunit alpha YP_001832717.1 1799336 R 395963 CDS YP_001832718.1 182678572 6201079 complement(1803108..1803449) 1 NC_010581.1 KEGG: nve:NEMVE_v1g246176 predicted protein Pfam: RRM_1 PROSITE: GLY_RICH RRM; hypothetical protein 1803449 6201079 Bind_1597 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832718.1 1803108 R 395963 CDS YP_001832719.1 182678573 6199685 complement(1803820..1804137) 1 NC_010581.1 hypothetical protein 1804137 6199685 Bind_1598 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832719.1 1803820 R 395963 CDS YP_001832720.1 182678574 6200116 complement(1804269..1805054) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_1116 ABC transporter related; ABC transporter-like protein 1805054 6200116 Bind_1599 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832720.1 1804269 R 395963 CDS YP_001832721.1 182678575 6201369 complement(1805054..1806211) 1 NC_010581.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1525 putative ABC transport system, integral membrane protein; polar amino acid ABC transporter inner membrane subunit 1806211 6201369 Bind_1600 Beijerinckia indica subsp. indica ATCC 9039 polar amino acid ABC transporter inner membrane subunit YP_001832721.1 1805054 R 395963 CDS YP_001832722.1 182678576 6199465 complement(1806214..1807389) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A1003 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; binding-protein-dependent transport system inner membrane protein 1807389 6199465 Bind_1601 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001832722.1 1806214 R 395963 CDS YP_001832723.1 182678577 6199807 complement(1807404..1808414) 1 NC_010581.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bja:blr4446 ABC transporter amino acid-binding protein; cationic amino acid ABC transporter periplasmic binding protein 1808414 6199807 Bind_1602 Beijerinckia indica subsp. indica ATCC 9039 cationic amino acid ABC transporter periplasmic binding protein YP_001832723.1 1807404 R 395963 CDS YP_001832724.1 182678578 6198873 1808853..1810676 1 NC_010581.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: nha:Nham_0943 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 1810676 6198873 Bind_1603 Beijerinckia indica subsp. indica ATCC 9039 filamentous hemagglutinin outer membrane protein YP_001832724.1 1808853 D 395963 CDS YP_001832725.1 182678579 6200952 1810876..1812063 1 NC_010581.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase; cystathionine beta-lyase 1812063 6200952 Bind_1604 Beijerinckia indica subsp. indica ATCC 9039 cystathionine beta-lyase YP_001832725.1 1810876 D 395963 CDS YP_001832726.1 182678580 6200897 1812188..1813009 1 NC_010581.1 hypothetical protein 1813009 6200897 Bind_1605 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832726.1 1812188 D 395963 CDS YP_001832727.1 182678581 6199680 complement(1813056..1813598) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_C_1598 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 1813598 6199680 Bind_1606 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832727.1 1813056 R 395963 CDS YP_001832728.1 182678582 6199794 1814247..1815806 1 NC_010581.1 KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 1815806 6199794 Bind_1607 Beijerinckia indica subsp. indica ATCC 9039 nitrogenase molybdenum-iron protein subunit beta YP_001832728.1 1814247 D 395963 CDS YP_001832729.1 182678583 6201024 complement(1816034..1816816) 1 NC_010581.1 KEGG: bra:BRADO4711 hypothetical protein; hypothetical protein 1816816 6201024 Bind_1608 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832729.1 1816034 R 395963 CDS YP_001832730.1 182678584 6200251 1816922..1817419 1 NC_010581.1 hypothetical protein 1817419 6200251 Bind_1609 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832730.1 1816922 D 395963 CDS YP_001832731.1 182678585 6198811 1818078..1818491 1 NC_010581.1 PFAM: protein of unknown function DUF983; KEGG: smd:Smed_1973 protein of unknown function DUF983; hypothetical protein 1818491 6198811 Bind_1611 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832731.1 1818078 D 395963 CDS YP_001832732.1 182678586 6201239 complement(1818596..1820194) 1 NC_010581.1 TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: rle:pRL110285 putative acid phosphatase; acid phosphatase 1820194 6201239 Bind_1612 Beijerinckia indica subsp. indica ATCC 9039 acid phosphatase YP_001832732.1 1818596 R 395963 CDS YP_001832733.1 182678587 6200339 1820462..1821736 1 NC_010581.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bte:BTH_I2670 di-haem cytochrome c peroxidase family protein; di-heme cytochrome c peroxidase 1821736 6200339 Bind_1613 Beijerinckia indica subsp. indica ATCC 9039 di-heme cytochrome c peroxidase YP_001832733.1 1820462 D 395963 CDS YP_001832734.1 182678588 6199203 1822069..1823112 1 NC_010581.1 PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein; patatin 1823112 6199203 Bind_1614 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001832734.1 1822069 D 395963 CDS YP_001832735.1 182678589 6200906 complement(1823425..1824432) 1 NC_010581.1 PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family 25; glycoside hydrolase family protein 1824432 6200906 Bind_1615 Beijerinckia indica subsp. indica ATCC 9039 glycoside hydrolase family protein YP_001832735.1 1823425 R 395963 CDS YP_001832736.1 182678590 6200646 1824776..1826512 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1269 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1826512 6200646 Bind_1616 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001832736.1 1824776 D 395963 CDS YP_001832737.1 182678591 6201167 1826523..1827857 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_1270 ABC transporter related; ABC transporter-like protein 1827857 6201167 Bind_1617 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832737.1 1826523 D 395963 CDS YP_001832738.1 182678592 6200736 1828215..1829129 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: mac:MA2170 glycosyltransferase; glycosyl transferase family protein 1829129 6200736 Bind_1618 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001832738.1 1828215 D 395963 CDS YP_001832739.1 182678593 6200867 complement(1829140..1830585) 1 NC_010581.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: bja:bll5251 putative transporter transmembrane protein; magnesium transporter 1830585 6200867 Bind_1619 Beijerinckia indica subsp. indica ATCC 9039 magnesium transporter YP_001832739.1 1829140 R 395963 CDS YP_001832740.1 182678594 6200190 1830656..1831621 1 NC_010581.1 PFAM: polysaccharide deacetylase; KEGG: azc:AZC_2836 polysaccharide deacetylase; polysaccharide deacetylase 1831621 6200190 Bind_1620 Beijerinckia indica subsp. indica ATCC 9039 polysaccharide deacetylase YP_001832740.1 1830656 D 395963 CDS YP_001832741.1 182678595 6201525 1832423..1833142 1 NC_010581.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: rpa:RPA3169 lipoyltransferase; lipoate-protein ligase B 1833142 6201525 Bind_1621 Beijerinckia indica subsp. indica ATCC 9039 lipoate-protein ligase B YP_001832741.1 1832423 D 395963 CDS YP_001832742.1 182678596 6199886 1833274..1833939 1 NC_010581.1 hypothetical protein 1833939 6199886 Bind_1622 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832742.1 1833274 D 395963 CDS YP_001832743.1 182678597 6199956 complement(1834026..1834463) 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: nwi:Nwi_2885 transcriptional regulatory protein, MarR family; MarR family transcriptional regulator 1834463 6199956 Bind_1623 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001832743.1 1834026 R 395963 CDS YP_001832744.1 182678598 6200201 1834546..1835328 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc04054 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1835328 6200201 Bind_1624 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001832744.1 1834546 D 395963 CDS YP_001832745.1 182678599 6199644 complement(1835388..1835987) 1 NC_010581.1 KEGG: bra:BRADO6543 conserved hypothetical protein; putative signal peptide; putative signal peptide 1835987 6199644 Bind_1625 Beijerinckia indica subsp. indica ATCC 9039 putative signal peptide YP_001832745.1 1835388 R 395963 CDS YP_001832746.1 182678600 6199585 complement(1836309..1836797) 1 NC_010581.1 PFAM: protein of unknown function UPF0153; KEGG: rpd:RPD_1955 hypothetical protein; hypothetical protein 1836797 6199585 Bind_1626 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832746.1 1836309 R 395963 CDS YP_001832747.1 182678601 6199656 1837123..1839279 1 NC_010581.1 KEGG: mex:Mext_0928 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 1839279 6199656 Bind_1627 Beijerinckia indica subsp. indica ATCC 9039 1A family penicillin-binding protein YP_001832747.1 1837123 D 395963 CDS YP_001832748.1 182678602 6198863 1839769..1840026 1 NC_010581.1 KEGG: sit:TM1040_0419 hypothetical protein; hypothetical protein 1840026 6198863 Bind_1628 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832748.1 1839769 D 395963 CDS YP_001832749.1 182678603 6198385 1840039..1840542 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1615 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1840542 6198385 Bind_1629 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832749.1 1840039 D 395963 CDS YP_001832750.1 182678604 6200549 complement(1840688..1841962) 1 NC_010581.1 KEGG: rle:RL0945 putative 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 1841962 6200549 Bind_1630 Beijerinckia indica subsp. indica ATCC 9039 3-phosphoshikimate 1-carboxyvinyltransferase YP_001832750.1 1840688 R 395963 CDS YP_001832751.1 182678605 6199665 1842520..1844916 1 NC_010581.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rle:pRL70183 hypothetical protein; hypothetical protein 1844916 6199665 Bind_1631 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832751.1 1842520 D 395963 CDS YP_001832752.1 182678606 6200330 1845062..1845628 1 NC_010581.1 PFAM: protein of unknown function DUF1214; KEGG: nha:Nham_1402 protein of unknown function DUF1214; hypothetical protein 1845628 6200330 Bind_1632 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832752.1 1845062 D 395963 CDS YP_001832753.1 182678607 6199594 1845625..1846254 1 NC_010581.1 KEGG: mex:Mext_0926 hypothetical protein; hypothetical protein 1846254 6199594 Bind_1633 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832753.1 1845625 D 395963 CDS YP_001832754.1 182678608 6199874 1847259..1847492 1 NC_010581.1 hypothetical protein 1847492 6199874 Bind_1634 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832754.1 1847259 D 395963 CDS YP_001832755.1 182678609 6200345 complement(1847579..1847962) 1 NC_010581.1 KEGG: mex:Mext_4416 hypothetical protein; hypothetical protein 1847962 6200345 Bind_1635 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832755.1 1847579 R 395963 CDS YP_001832756.1 182678610 6201170 1848185..1849765 1 NC_010581.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mex:Mext_4415 protein of unknown function DUF853 NPT hydrolase putative; hypothetical protein 1849765 6201170 Bind_1636 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832756.1 1848185 D 395963 CDS YP_001832757.1 182678611 6200481 1849848..1851467 1 NC_010581.1 PFAM: phosphate transporter; KEGG: bra:BRADO6359 putative low-affinity inorganic phosphate transport protein (PiT family); phosphate transporter 1851467 6200481 Bind_1637 Beijerinckia indica subsp. indica ATCC 9039 phosphate transporter YP_001832757.1 1849848 D 395963 CDS YP_001832758.1 182678612 6200753 complement(1851781..1852611) 1 NC_010581.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpa:RPA1859 hypothetical protein; peptidoglycan binding domain-containing protein 1852611 6200753 Bind_1638 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan binding domain-containing protein YP_001832758.1 1851781 R 395963 CDS YP_001832759.1 182678613 6199903 complement(1852643..1854394) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_1779 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1854394 6199903 Bind_1639 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor signal transduction histidine kinase YP_001832759.1 1852643 R 395963 CDS YP_001832760.1 182678614 6199776 1854711..1855112 1 NC_010581.1 hypothetical protein 1855112 6199776 Bind_1640 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832760.1 1854711 D 395963 CDS YP_001832761.1 182678615 6199235 1855543..1855968 1 NC_010581.1 PFAM: Fe-S metabolism associated SufE; KEGG: nha:Nham_2625 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1855968 6199235 Bind_1641 Beijerinckia indica subsp. indica ATCC 9039 Fe-S metabolism associated SufE YP_001832761.1 1855543 D 395963 CDS YP_001832762.1 182678616 6200462 complement(1856124..1856540) 1 NC_010581.1 PFAM: ROSMUCR transcriptional regulator; KEGG: azc:AZC_1086 putative transcriptional regulator; MucR family transcriptional regulator 1856540 6200462 Bind_1642 Beijerinckia indica subsp. indica ATCC 9039 MucR family transcriptional regulator YP_001832762.1 1856124 R 395963 CDS YP_001832763.1 182678617 6198766 1856920..1857360 1 NC_010581.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: pla:Plav_0845 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase 1857360 6198766 Bind_1643 Beijerinckia indica subsp. indica ATCC 9039 methionine-R-sulfoxide reductase YP_001832763.1 1856920 D 395963 CDS YP_001832764.1 182678618 6198859 1857557..1859662 1 NC_010581.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: xau:Xaut_2839 oligopeptidase B; oligopeptidase B 1859662 6198859 Bind_1644 Beijerinckia indica subsp. indica ATCC 9039 oligopeptidase B YP_001832764.1 1857557 D 395963 CDS YP_001832765.1 182678619 6198510 complement(1859761..1860942) 1 NC_010581.1 KEGG: azc:AZC_3052 hypothetical protein; hypothetical protein 1860942 6198510 Bind_1645 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832765.1 1859761 R 395963 CDS YP_001832766.1 182678620 6199557 1861702..1862301 1 NC_010581.1 PFAM: manganese and iron superoxide dismutase; KEGG: xau:Xaut_3319 superoxide dismutase; superoxide dismutase 1862301 6199557 Bind_1646 Beijerinckia indica subsp. indica ATCC 9039 superoxide dismutase YP_001832766.1 1861702 D 395963 CDS YP_001832767.1 182678621 6201137 complement(1862298..1863161) 1 NC_010581.1 PFAM: YdjC family protein; KEGG: azo:azo0748 cellobiose phosphorylase; hypothetical protein 1863161 6201137 Bind_1647 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832767.1 1862298 R 395963 CDS YP_001832768.1 182678622 6200520 complement(1863983..1864618) 1 NC_010581.1 KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; hypothetical protein 1864618 6200520 Bind_1648 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832768.1 1863983 R 395963 CDS YP_001832769.1 182678623 6200999 complement(1864754..1865332) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 1865332 6200999 Bind_1649 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832769.1 1864754 R 395963 CDS YP_001832770.1 182678624 6199826 1866200..1867195 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: syn:sll0501 putative glycosyl transferase; glycosyl transferase family protein 1867195 6199826 Bind_1650 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001832770.1 1866200 D 395963 CDS YP_001832771.1 182678625 6199640 1867273..1868802 1 NC_010581.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral membrane protein MviN; integral membrane protein MviN 1868802 6199640 Bind_1651 Beijerinckia indica subsp. indica ATCC 9039 integral membrane protein MviN YP_001832771.1 1867273 D 395963 CDS YP_001832772.1 182678626 6199991 1869227..1869436 1 NC_010581.1 KEGG: son:SO_A0168 ISSo9, nucleotidyltransferase domain protein; ISSo9, nucleotidyltransferase domain-containing protein 1869436 6199991 Bind_1652 Beijerinckia indica subsp. indica ATCC 9039 ISSo9, nucleotidyltransferase domain-containing protein YP_001832772.1 1869227 D 395963 CDS YP_001832773.1 182678627 6200216 1869433..1869813 1 NC_010581.1 PFAM: protein of unknown function DUF86; KEGG: mfa:Mfla_2451 protein of unknown function DUF86; hypothetical protein 1869813 6200216 Bind_1653 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832773.1 1869433 D 395963 CDS YP_001832774.1 182678628 6200473 complement(1870025..1871692) 1 NC_010581.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase 1871692 6200473 Bind_1654 Beijerinckia indica subsp. indica ATCC 9039 formate--tetrahydrofolate ligase YP_001832774.1 1870025 R 395963 CDS YP_001832775.1 182678629 6200882 complement(1871993..1873378) 1 NC_010581.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: oan:Oant_0136 peptidase M20; hypothetical protein 1873378 6200882 Bind_1655 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832775.1 1871993 R 395963 CDS YP_001832776.1 182678630 6201122 1873553..1873891 1 NC_010581.1 PFAM: protein of unknown function DUF1491; KEGG: rpe:RPE_1874 protein of unknown function DUF1491; hypothetical protein 1873891 6201122 Bind_1656 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832776.1 1873553 D 395963 CDS YP_001832777.1 182678631 6201345 complement(1873903..1875129) 1 NC_010581.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: ret:RHE_CH00450 hypothetical protein; hypothetical protein 1875129 6201345 Bind_1657 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832777.1 1873903 R 395963 CDS YP_001832778.1 182678632 6199770 1875325..1876002 1 NC_010581.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I 1876002 6199770 Bind_1658 Beijerinckia indica subsp. indica ATCC 9039 peptidase C15 pyroglutamyl peptidase I YP_001832778.1 1875325 D 395963 CDS YP_001832779.1 182678633 6199677 complement(1876007..1876495) 1 NC_010581.1 KEGG: mpt:Mpe_A2419 MxaD protein; MxaD protein 1876495 6199677 Bind_1659 Beijerinckia indica subsp. indica ATCC 9039 MxaD protein YP_001832779.1 1876007 R 395963 CDS YP_001832780.1 182678634 6200561 complement(1876615..1877787) 1 NC_010581.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II; class I and II aminotransferase 1877787 6200561 Bind_1660 Beijerinckia indica subsp. indica ATCC 9039 class I and II aminotransferase YP_001832780.1 1876615 R 395963 CDS YP_001832781.1 182678635 6200802 1878378..1879205 1 NC_010581.1 PFAM: DSBA oxidoreductase; KEGG: bja:bll4294 outer membrane protein; DSBA oxidoreductase 1879205 6200802 Bind_1661 Beijerinckia indica subsp. indica ATCC 9039 DSBA oxidoreductase YP_001832781.1 1878378 D 395963 CDS YP_001832782.1 182678636 6199345 1879482..1880219 1 NC_010581.1 KEGG: bra:BRADO3597 hypothetical protein; hypothetical protein 1880219 6199345 Bind_1662 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832782.1 1879482 D 395963 CDS YP_001832783.1 182678637 6201481 complement(1880458..1881948) 1 NC_010581.1 PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region; amino acid permease-associated protein 1881948 6201481 Bind_1663 Beijerinckia indica subsp. indica ATCC 9039 amino acid permease-associated protein YP_001832783.1 1880458 R 395963 CDS YP_001832784.1 182678638 6200081 1882268..1883536 1 NC_010581.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase; amine oxidase 1883536 6200081 Bind_1664 Beijerinckia indica subsp. indica ATCC 9039 amine oxidase YP_001832784.1 1882268 D 395963 CDS YP_001832785.1 182678639 6201116 1883650..1884906 1 NC_010581.1 PFAM: protein of unknown function DUF482; KEGG: azc:AZC_2321 hypothetical protein; hypothetical protein 1884906 6201116 Bind_1665 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832785.1 1883650 D 395963 CDS YP_001832786.1 182678640 6200179 1884961..1885389 1 NC_010581.1 PFAM: histidine triad (HIT) protein; KEGG: xau:Xaut_3536 histidine triad (HIT) protein; histidine triad (HIT) protein 1885389 6200179 Bind_1666 Beijerinckia indica subsp. indica ATCC 9039 histidine triad (HIT) protein YP_001832786.1 1884961 D 395963 CDS YP_001832787.1 182678641 6198711 complement(1885504..1887993) 1 NC_010581.1 KEGG: mex:Mext_4802 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1887993 6198711 Bind_1667 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent Clp protease ATP-binding protein ClpA YP_001832787.1 1885504 R 395963 CDS YP_001832788.1 182678642 6200578 complement(1888007..1888420) 1 NC_010581.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: xau:Xaut_4537 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 1888420 6200578 Bind_1668 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent Clp protease adaptor protein ClpS YP_001832788.1 1888007 R 395963 CDS YP_001832789.1 182678643 6200484 complement(1889325..1889666) 1 NC_010581.1 KEGG: mlo:mll0665 hypothetical protein; hypothetical protein 1889666 6200484 Bind_1669 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832789.1 1889325 R 395963 CDS YP_001832790.1 182678644 6199525 1889954..1891645 1 NC_010581.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: bra:BRADO4549 putative D-alanyl-D-alanine carboxypeptidase (peptidase S11)(dd-carboxypeptidase); serine-type D-Ala-D-Ala carboxypeptidase 1891645 6199525 Bind_1670 Beijerinckia indica subsp. indica ATCC 9039 serine-type D-Ala-D-Ala carboxypeptidase YP_001832790.1 1889954 D 395963 CDS YP_001832791.1 182678645 6199120 complement(1891935..1892687) 1 NC_010581.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rpe:RPE_3408 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1892687 6199120 Bind_1671 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein DnaJ domain-containing protein YP_001832791.1 1891935 R 395963 CDS YP_001832792.1 182678646 6201730 complement(1892819..1893472) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: rru:Rru_A3193 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 1893472 6201730 Bind_1672 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001832792.1 1892819 R 395963 CDS YP_001832793.1 182678647 6201243 complement(1893533..1894387) 1 NC_010581.1 PFAM: protein of unknown function DUF218; KEGG: bra:BRADO4236 hypothetical protein; hypothetical protein 1894387 6201243 Bind_1673 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832793.1 1893533 R 395963 CDS YP_001832794.1 182678648 6199763 complement(1894519..1894737) 1 NC_010581.1 PFAM: protein of unknown function DUF329; KEGG: xau:Xaut_2724 protein of unknown function DUF329; hypothetical protein 1894737 6199763 Bind_1674 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832794.1 1894519 R 395963 CDS YP_001832795.1 182678649 6200983 complement(1894850..1895536) 1 NC_010581.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bbt:BBta_0900 Maf-like protein; maf protein 1895536 6200983 Bind_1675 Beijerinckia indica subsp. indica ATCC 9039 maf protein YP_001832795.1 1894850 R 395963 CDS YP_001832796.1 182678650 6201290 complement(1895565..1895783) 1 NC_010581.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1895783 infA 6201290 infA Beijerinckia indica subsp. indica ATCC 9039 translation initiation factor IF-1 YP_001832796.1 1895565 R 395963 CDS YP_001832797.1 182678651 6200352 1896083..1896751 1 NC_010581.1 PFAM: O-methyltransferase family 3; KEGG: bwe:BcerKBAB4_1827 O-methyltransferase family 3; O-methyltransferase family protein 1896751 6200352 Bind_1677 Beijerinckia indica subsp. indica ATCC 9039 O-methyltransferase family protein YP_001832797.1 1896083 D 395963 CDS YP_001832798.1 182678652 6200138 complement(1896954..1897790) 1 NC_010581.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 1897790 6200138 Bind_1678 Beijerinckia indica subsp. indica ATCC 9039 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001832798.1 1896954 R 395963 CDS YP_001832799.1 182678653 6199819 complement(1898032..1898730) 1 NC_010581.1 KEGG: bja:blr3796 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 1898730 6199819 Bind_1679 Beijerinckia indica subsp. indica ATCC 9039 phosphatidylserine decarboxylase YP_001832799.1 1898032 R 395963 CDS YP_001832800.1 182678654 6199892 1899873..1900184 1 NC_010581.1 KEGG: bbt:BBta_6628 hypothetical protein; hypothetical protein 1900184 6199892 Bind_1680 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832800.1 1899873 D 395963 CDS YP_001832801.1 182678655 6199520 1900123..1900494 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_2943 putative phage-related transcriptional regulator; XRE family transcriptional regulator 1900494 6199520 Bind_1681 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001832801.1 1900123 D 395963 CDS YP_001832802.1 182678656 6199806 complement(1900586..1901503) 1 NC_010581.1 KEGG: zmo:ZMO0744 hypothetical protein; hypothetical protein 1901503 6199806 Bind_1682 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832802.1 1900586 R 395963 CDS YP_001832803.1 182678657 6199882 1902213..1903718 1 NC_010581.1 PFAM: amino acid permease-associated region; KEGG: mbn:Mboo_1999 amino acid permease-associated region; amino acid permease-associated protein 1903718 6199882 Bind_1683 Beijerinckia indica subsp. indica ATCC 9039 amino acid permease-associated protein YP_001832803.1 1902213 D 395963 CDS YP_001832804.1 182678658 6199502 1903765..1904046 1 NC_010581.1 hypothetical protein 1904046 6199502 Bind_1684 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832804.1 1903765 D 395963 CDS YP_001832805.1 182678659 6199256 1904182..1904547 1 NC_010581.1 KEGG: mca:MCA1026 hypothetical protein; hypothetical protein 1904547 6199256 Bind_1685 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832805.1 1904182 D 395963 CDS YP_001832806.1 182678660 6200143 1904938..1905573 1 NC_010581.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mlo:mll4676 contains weak similarity to thioredoxin reductase; heat shock protein DnaJ domain-containing protein 1905573 6200143 Bind_1686 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein DnaJ domain-containing protein YP_001832806.1 1904938 D 395963 CDS YP_001832807.1 182678661 6199247 1906090..1907031 1 NC_010581.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: rru:Rru_A2869 exopolysaccharide synthesis, ExoD; exopolysaccharide synthesis ExoD 1907031 6199247 Bind_1687 Beijerinckia indica subsp. indica ATCC 9039 exopolysaccharide synthesis ExoD YP_001832807.1 1906090 D 395963 CDS YP_001832808.1 182678662 6200100 1907034..1907363 1 NC_010581.1 hypothetical protein 1907363 6200100 Bind_1688 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832808.1 1907034 D 395963 CDS YP_001832809.1 182678663 6199969 complement(1907450..1909267) 1 NC_010581.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: drm:Dred_1995 sulphate transporter; sulfate transporter 1909267 6199969 Bind_1689 Beijerinckia indica subsp. indica ATCC 9039 sulfate transporter YP_001832809.1 1907450 R 395963 CDS YP_001832810.1 182678664 6199045 complement(1909415..1910446) 1 NC_010581.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: nha:Nham_3560 thiosulphate-binding protein; sulfate ABC transporter substrate-binding protein 1910446 6199045 Bind_1690 Beijerinckia indica subsp. indica ATCC 9039 sulfate ABC transporter substrate-binding protein YP_001832810.1 1909415 R 395963 CDS YP_001832811.1 182678665 6200224 complement(1910635..1913412) 1 NC_010581.1 PFAM: E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein 1913412 6200224 Bind_1691 Beijerinckia indica subsp. indica ATCC 9039 E1-E2 ATPase-associated domain-containing protein YP_001832811.1 1910635 R 395963 CDS YP_001832812.1 182678666 6200412 1913710..1914186 1 NC_010581.1 PFAM: OsmC family protein; KEGG: acr:Acry_2755 OsmC family protein; OsmC family protein 1914186 6200412 Bind_1692 Beijerinckia indica subsp. indica ATCC 9039 OsmC family protein YP_001832812.1 1913710 D 395963 CDS YP_001832813.1 182678667 6198203 1914627..1915439 1 NC_010581.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0593 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1915439 6198203 Bind_1693 Beijerinckia indica subsp. indica ATCC 9039 aspartate/glutamate/uridylate kinase YP_001832813.1 1914627 D 395963 CDS YP_001832814.1 182678668 6200949 1915452..1916285 1 NC_010581.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0592 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 1916285 6200949 Bind_1694 Beijerinckia indica subsp. indica ATCC 9039 aspartate/glutamate/uridylate kinase YP_001832814.1 1915452 D 395963 CDS YP_001832815.1 182678669 6200280 complement(1916496..1919165) 1 NC_010581.1 PFAM: E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein 1919165 6200280 Bind_1695 Beijerinckia indica subsp. indica ATCC 9039 E1-E2 ATPase-associated domain-containing protein YP_001832815.1 1916496 R 395963 CDS YP_001832816.1 182678670 6199167 complement(1919396..1920409) 1 NC_010581.1 PFAM: ribonuclease T2; KEGG: rru:Rru_A3450 ribonuclease T2; ribonuclease T2 1920409 6199167 Bind_1696 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease T2 YP_001832816.1 1919396 R 395963 CDS YP_001832817.1 182678671 6199307 1921013..1921315 1 NC_010581.1 KEGG: bbt:BBta_2494 putative exported protein of unknown function; hypothetical protein 1921315 6199307 Bind_1698 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832817.1 1921013 D 395963 CDS YP_001832818.1 182678672 6199313 1921343..1921633 1 NC_010581.1 KEGG: bja:bll5766 hypothetical protein; hypothetical protein 1921633 6199313 Bind_1699 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832818.1 1921343 D 395963 CDS YP_001832819.1 182678673 6200175 complement(1922077..1923105) 1 NC_010581.1 hypothetical protein 1923105 6200175 Bind_1700 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832819.1 1922077 R 395963 CDS YP_001832820.1 182678674 6201350 1923416..1923691 1 NC_010581.1 hypothetical protein 1923691 6201350 Bind_1701 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832820.1 1923416 D 395963 CDS YP_001832821.1 182678675 6200119 complement(1923869..1924153) 1 NC_010581.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: smd:Smed_4342 cell division topological specificity factor MinE; cell division topological specificity factor MinE 1924153 6200119 Bind_1702 Beijerinckia indica subsp. indica ATCC 9039 cell division topological specificity factor MinE YP_001832821.1 1923869 R 395963 CDS YP_001832822.1 182678676 6201009 complement(1924150..1924968) 1 NC_010581.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: acr:Acry_1991 septum site-determining protein MinD; septum site-determining protein MinD 1924968 6201009 Bind_1703 Beijerinckia indica subsp. indica ATCC 9039 septum site-determining protein MinD YP_001832822.1 1924150 R 395963 CDS YP_001832823.1 182678677 6201115 complement(1925078..1925812) 1 NC_010581.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: bmb:BruAb2_0860 septum formation inhibitor; septum site-determining protein MinC 1925812 6201115 Bind_1704 Beijerinckia indica subsp. indica ATCC 9039 septum site-determining protein MinC YP_001832823.1 1925078 R 395963 CDS YP_001832824.1 182678678 6198798 complement(1925989..1926501) 1 NC_010581.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein; flavin reductase domain-containing protein 1926501 6198798 Bind_1705 Beijerinckia indica subsp. indica ATCC 9039 flavin reductase domain-containing protein YP_001832824.1 1925989 R 395963 CDS YP_001832825.1 182678679 6198978 complement(1926796..1927980) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I1400 major facilitator family transporter; major facilitator transporter 1927980 6198978 Bind_1706 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001832825.1 1926796 R 395963 CDS YP_001832826.1 182678680 6201195 complement(1928176..1928460) 1 NC_010581.1 KEGG: nar:Saro_2521 protein of unknown function DUF1476; hypothetical protein 1928460 6201195 Bind_1707 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832826.1 1928176 R 395963 CDS YP_001832827.1 182678681 6201731 complement(1928659..1928871) 1 NC_010581.1 KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 1928871 6201731 Bind_1708 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832827.1 1928659 R 395963 CDS YP_001832828.1 182678682 6200967 complement(1929200..1930132) 1 NC_010581.1 KEGG: azc:AZC_3998 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1930132 6200967 Bind_1709 Beijerinckia indica subsp. indica ATCC 9039 ribose-phosphate pyrophosphokinase YP_001832828.1 1929200 R 395963 CDS YP_001832829.1 182678683 6200513 complement(1930337..1930741) 1 NC_010581.1 KEGG: bbt:BBta_2974 hypothetical protein; hypothetical protein 1930741 6200513 Bind_1710 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832829.1 1930337 R 395963 CDS YP_001832830.1 182678684 6198977 complement(1931548..1932219) 1 NC_010581.1 KEGG: bbt:BBta_1762 putative exported protein of unknown function; hypothetical protein 1932219 6198977 Bind_1711 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832830.1 1931548 R 395963 CDS YP_001832831.1 182678685 6199164 1932431..1934509 1 NC_010581.1 KEGG: mex:Mext_2878 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 1934509 6199164 Bind_1712 Beijerinckia indica subsp. indica ATCC 9039 excinuclease ABC subunit C YP_001832831.1 1932431 D 395963 CDS YP_001832832.1 182678686 6199575 1934514..1935110 1 NC_010581.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1935110 6199575 Bind_1713 Beijerinckia indica subsp. indica ATCC 9039 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001832832.1 1934514 D 395963 CDS YP_001832833.1 182678687 6200864 1935148..1935399 1 NC_010581.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mex:Mext_2876 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 1935399 6200864 Bind_1714 Beijerinckia indica subsp. indica ATCC 9039 molybdopterin converting factor subunit 1 YP_001832833.1 1935148 D 395963 CDS YP_001832834.1 182678688 6199666 1935404..1935883 1 NC_010581.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mlo:mlr7915 molybdopterin converting factor, subunit 2; molybdopterin biosynthesis MoaE protein 1935883 6199666 Bind_1715 Beijerinckia indica subsp. indica ATCC 9039 molybdopterin biosynthesis MoaE protein YP_001832834.1 1935404 D 395963 CDS YP_001832835.1 182678689 6198818 1936308..1938269 1 NC_010581.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: xau:Xaut_4224 surface antigen (D15); surface antigen (D15) 1938269 6198818 Bind_1716 Beijerinckia indica subsp. indica ATCC 9039 surface antigen (D15) YP_001832835.1 1936308 D 395963 CDS YP_001832836.1 182678690 6199582 1938266..1942537 1 NC_010581.1 PFAM: protein of unknown function DUF490; KEGG: xau:Xaut_4225 protein of unknown function DUF490; hypothetical protein 1942537 6199582 Bind_1717 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832836.1 1938266 D 395963 CDS YP_001832837.1 182678691 6198442 complement(1942528..1943082) 1 NC_010581.1 KEGG: pla:Plav_0662 putative DNA topology modulation protein FlaR; putative DNA topology modulation protein FlaR 1943082 6198442 Bind_1718 Beijerinckia indica subsp. indica ATCC 9039 putative DNA topology modulation protein FlaR YP_001832837.1 1942528 R 395963 CDS YP_001832838.1 182678692 6200624 complement(1943108..1943872) 1 NC_010581.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mag:amb0238 transcriptional regulator; GntR family transcriptional regulator 1943872 6200624 Bind_1719 Beijerinckia indica subsp. indica ATCC 9039 GntR family transcriptional regulator YP_001832838.1 1943108 R 395963 CDS YP_001832839.1 182678693 6199692 complement(1944057..1945052) 1 NC_010581.1 PFAM: putative sugar-binding domain protein; KEGG: atc:AGR_L_843 operon regulator; DeoR family transcriptional regulator 1945052 6199692 Bind_1720 Beijerinckia indica subsp. indica ATCC 9039 DeoR family transcriptional regulator YP_001832839.1 1944057 R 395963 CDS YP_001832840.1 182678694 6198524 1945332..1946675 1 NC_010581.1 PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase; hydroxypyruvate reductase 1946675 6198524 Bind_1721 Beijerinckia indica subsp. indica ATCC 9039 hydroxypyruvate reductase YP_001832840.1 1945332 D 395963 CDS YP_001832841.1 182678695 6201331 1946679..1947287 1 NC_010581.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ava:Ava_3904 lipolytic enzyme, G-D-S-L; GDSL family lipase 1947287 6201331 Bind_1722 Beijerinckia indica subsp. indica ATCC 9039 GDSL family lipase YP_001832841.1 1946679 D 395963 CDS YP_001832842.1 182678696 6198939 complement(1947590..1950328) 1 NC_010581.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase; valyl-tRNA synthetase 1950328 6198939 Bind_1723 Beijerinckia indica subsp. indica ATCC 9039 valyl-tRNA synthetase YP_001832842.1 1947590 R 395963 CDS YP_001832843.1 182678697 6198957 complement(1950821..1951252) 1 NC_010581.1 KEGG: nwi:Nwi_1435 hypothetical protein; hypothetical protein 1951252 6198957 Bind_1724 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832843.1 1950821 R 395963 CDS YP_001832844.1 182678698 6200870 complement(1951672..1953141) 1 NC_010581.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 1953141 6200870 Bind_1725 Beijerinckia indica subsp. indica ATCC 9039 TolC family type I secretion outer membrane protein YP_001832844.1 1951672 R 395963 CDS YP_001832845.1 182678699 6199848 complement(1954038..1954775) 1 NC_010581.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: xau:Xaut_4234 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1954775 6199848 Bind_1726 Beijerinckia indica subsp. indica ATCC 9039 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001832845.1 1954038 R 395963 CDS YP_001832846.1 182678700 6200413 1955122..1955448 1 NC_010581.1 hypothetical protein 1955448 6200413 Bind_1727 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832846.1 1955122 D 395963 CDS YP_001832847.1 182678701 6199405 1955432..1955998 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll6511 acetyltransferase; N-acetyltransferase GCN5 1955998 6199405 Bind_1728 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001832847.1 1955432 D 395963 CDS YP_001832848.1 182678702 6200534 1956084..1956680 1 NC_010581.1 PFAM: dihydrofolate reductase region; KEGG: xau:Xaut_1420 dihydrofolate reductase; dihydrofolate reductase 1956680 6200534 Bind_1729 Beijerinckia indica subsp. indica ATCC 9039 dihydrofolate reductase YP_001832848.1 1956084 D 395963 CDS YP_001832849.1 182678703 6199786 1956760..1957929 1 NC_010581.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rpa:RPA3491 putative protease subunit HflK; HflK protein 1957929 6199786 Bind_1730 Beijerinckia indica subsp. indica ATCC 9039 HflK protein YP_001832849.1 1956760 D 395963 CDS YP_001832850.1 182678704 6201154 1957926..1958813 1 NC_010581.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: xau:Xaut_1663 HflC protein; HflC protein 1958813 6201154 Bind_1731 Beijerinckia indica subsp. indica ATCC 9039 HflC protein YP_001832850.1 1957926 D 395963 CDS YP_001832851.1 182678705 6200217 complement(1958879..1959607) 1 NC_010581.1 KEGG: gdi:GDI3686 hypothetical protein; hypothetical protein 1959607 6200217 Bind_1732 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832851.1 1958879 R 395963 CDS YP_001832852.1 182678706 6199643 1960109..1961677 1 NC_010581.1 KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1961677 6199643 Bind_1733 Beijerinckia indica subsp. indica ATCC 9039 protease Do YP_001832852.1 1960109 D 395963 CDS YP_001832853.1 182678707 6200025 complement(1961925..1962992) 1 NC_010581.1 PFAM: Patatin; KEGG: bam:Bamb_5833 patatin; patatin 1962992 6200025 Bind_1734 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001832853.1 1961925 R 395963 CDS YP_001832854.1 182678708 6199789 complement(1963045..1964739) 1 NC_010581.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_PE00049 adenylate cyclase protein; adenylate/guanylate cyclase 1964739 6199789 Bind_1735 Beijerinckia indica subsp. indica ATCC 9039 adenylate/guanylate cyclase YP_001832854.1 1963045 R 395963 CDS YP_001832855.1 182678709 6200808 complement(1964944..1965129) 1 NC_010581.1 hypothetical protein 1965129 6200808 Bind_1736 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832855.1 1964944 R 395963 CDS YP_001832856.1 182678710 6200494 1965380..1965667 1 NC_010581.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1965667 groES 6200494 groES Beijerinckia indica subsp. indica ATCC 9039 co-chaperonin GroES YP_001832856.1 1965380 D 395963 CDS YP_001832857.1 182678711 6200696 1965730..1967376 1 NC_010581.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: azc:AZC_2312 chaperonin; chaperonin GroEL 1967376 6200696 Bind_1738 Beijerinckia indica subsp. indica ATCC 9039 chaperonin GroEL YP_001832857.1 1965730 D 395963 CDS YP_001832858.1 182678712 6201353 1967746..1968114 1 NC_010581.1 PFAM: histone family protein DNA-binding protein; KEGG: xau:Xaut_4386 integration host factor, alpha subunit; histone family protein DNA-binding protein 1968114 6201353 Bind_1739 Beijerinckia indica subsp. indica ATCC 9039 histone family protein DNA-binding protein YP_001832858.1 1967746 D 395963 CDS YP_001832859.1 182678713 6198734 1968556..1970694 1 NC_010581.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mex:Mext_4485 ABC transporter domain protein; ABC transporter 1970694 6198734 Bind_1740 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter YP_001832859.1 1968556 D 395963 CDS YP_001832860.1 182678714 6201367 complement(1970839..1971222) 1 NC_010581.1 KEGG: rpd:RPD_2521 hypothetical protein; hypothetical protein 1971222 6201367 Bind_1741 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832860.1 1970839 R 395963 CDS YP_001832861.1 182678715 6199591 complement(1971971..1973176) 1 NC_010581.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_0566 ABC-2 type transporter; ABC-2 type transporter 1973176 6199591 Bind_1742 Beijerinckia indica subsp. indica ATCC 9039 ABC-2 type transporter YP_001832861.1 1971971 R 395963 CDS YP_001832862.1 182678716 6199574 complement(1973178..1975931) 1 NC_010581.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: mex:Mext_0565 ABC transporter related; ABC transporter-like protein 1975931 6199574 Bind_1743 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832862.1 1973178 R 395963 CDS YP_001832863.1 182678717 6199242 complement(1975941..1976993) 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0564 secretion protein HlyD family protein; secretion protein HlyD family protein 1976993 6199242 Bind_1744 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001832863.1 1975941 R 395963 CDS YP_001832864.1 182678718 6201365 complement(1977212..1977475) 1 NC_010581.1 KEGG: rpa:RPA4109 hypothetical protein; hypothetical protein 1977475 6201365 Bind_1745 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832864.1 1977212 R 395963 CDS YP_001832865.1 182678719 6199787 complement(1977580..1978209) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: rpa:RPA2189 possible transcriptional regulator, TetR family; TetR family transcriptional regulator 1978209 6199787 Bind_1746 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001832865.1 1977580 R 395963 CDS YP_001832866.1 182678720 6199756 complement(1978598..1978984) 1 NC_010581.1 KEGG: rpa:RPA3831 hypothetical protein; hypothetical protein 1978984 6199756 Bind_1747 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832866.1 1978598 R 395963 CDS YP_001832867.1 182678721 6201077 complement(1979081..1979863) 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azc:AZC_2866 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1979863 6201077 Bind_1748 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001832867.1 1979081 R 395963 CDS YP_001832868.1 182678722 6200300 complement(1979876..1980802) 1 NC_010581.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: azc:AZC_0931 putative 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 1980802 6200300 Bind_1749 Beijerinckia indica subsp. indica ATCC 9039 2-nitropropane dioxygenase YP_001832868.1 1979876 R 395963 CDS YP_001832869.1 182678723 6198886 complement(1980814..1982415) 1 NC_010581.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mag:amb4437 dehydrogenase; electron-transferring-flavoprotein dehydrogenase 1982415 6198886 Bind_1750 Beijerinckia indica subsp. indica ATCC 9039 electron-transferring-flavoprotein dehydrogenase YP_001832869.1 1980814 R 395963 CDS YP_001832870.1 182678724 6199940 complement(1982541..1983476) 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mag:amb3229 electron transfer flavoprotein; electron transfer flavoprotein subunit alpha 1983476 6199940 Bind_1751 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein subunit alpha YP_001832870.1 1982541 R 395963 CDS YP_001832871.1 182678725 6198668 complement(1983478..1984227) 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dar:Daro_1211 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit 1984227 6198668 Bind_1752 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein alpha/beta-subunit YP_001832871.1 1983478 R 395963 CDS YP_001832872.1 182678726 6200503 complement(1984278..1984796) 1 NC_010581.1 PFAM: thioesterase superfamily protein; KEGG: rru:Rru_A1307 thioesterase superfamily; thioesterase superfamily protein 1984796 6200503 Bind_1753 Beijerinckia indica subsp. indica ATCC 9039 thioesterase superfamily protein YP_001832872.1 1984278 R 395963 CDS YP_001832873.1 182678727 6200409 complement(1984824..1986608) 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rru:Rru_A1308 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1986608 6200409 Bind_1754 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase domain-containing protein YP_001832873.1 1984824 R 395963 CDS YP_001832874.1 182678728 6200795 complement(1986644..1988965) 1 NC_010581.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rru:Rru_A1309 acetoacetyl-CoA reductase; 3-hydroxyacyl-CoA dehydrogenase 1988965 6200795 Bind_1755 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxyacyl-CoA dehydrogenase YP_001832874.1 1986644 R 395963 CDS YP_001832875.1 182678729 6200767 complement(1988965..1990101) 1 NC_010581.1 KEGG: rru:Rru_A1310 acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1990101 6200767 Bind_1756 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA acetyltransferase YP_001832875.1 1988965 R 395963 CDS YP_001832876.1 182678730 6200282 complement(1990144..1991808) 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rru:Rru_A1312 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1991808 6200282 Bind_1757 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001832876.1 1990144 R 395963 CDS YP_001832877.1 182678731 6200318 complement(1991881..1993173) 1 NC_010581.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rru:Rru_A1313 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 1993173 6200318 Bind_1758 Beijerinckia indica subsp. indica ATCC 9039 aromatic hydrocarbon degradation membrane protein YP_001832877.1 1991881 R 395963 CDS YP_001832878.1 182678732 6200488 1993646..1994662 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pau:PA14_37400 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 1994662 6200488 Bind_1759 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001832878.1 1993646 D 395963 CDS YP_001832879.1 182678733 6200936 complement(1994748..1995515) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pca:Pcar_1081 oxidoreductase, putative short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 1995515 6200936 Bind_1760 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832879.1 1994748 R 395963 CDS YP_001832880.1 182678734 6200907 complement(1995529..1996248) 1 NC_010581.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rle:RL2355 putative carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1996248 6200907 Bind_1761 Beijerinckia indica subsp. indica ATCC 9039 carboxymuconolactone decarboxylase YP_001832880.1 1995529 R 395963 CDS YP_001832881.1 182678735 6201192 1997421..1998656 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: cak:Caul_3692 acyltransferase 3; acyltransferase 3 1998656 6201192 Bind_1763 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001832881.1 1997421 D 395963 CDS YP_001832882.1 182678736 6199898 1999352..1999690 1 NC_010581.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: xau:Xaut_3342 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1999690 6199898 Bind_1765 Beijerinckia indica subsp. indica ATCC 9039 Rieske (2Fe-2S) domain-containing protein YP_001832882.1 1999352 D 395963 CDS YP_001832883.1 182678737 6199323 complement(1999878..2000549) 1 NC_010581.1 KEGG: dre:552915 dynein, axonemal, heavy polypeptide 9 like; hypothetical protein 2000549 6199323 Bind_1766 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832883.1 1999878 R 395963 CDS YP_001832884.1 182678738 6199356 2000987..2001976 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: xau:Xaut_3336 aldo/keto reductase; aldo/keto reductase 2001976 6199356 Bind_1767 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001832884.1 2000987 D 395963 CDS YP_001832885.1 182678739 6201306 complement(2002005..2002412) 1 NC_010581.1 PFAM: protein of unknown function DUF1311; KEGG: mes:Meso_2486 protein of unknown function DUF1311; hypothetical protein 2002412 6201306 Bind_1768 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832885.1 2002005 R 395963 CDS YP_001832886.1 182678740 6201347 complement(2002559..2003797) 1 NC_010581.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase; amine oxidase 2003797 6201347 Bind_1769 Beijerinckia indica subsp. indica ATCC 9039 amine oxidase YP_001832886.1 2002559 R 395963 CDS YP_001832887.1 182678741 6201164 complement(2003853..2004911) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_2420 D-isomer specific 2-hydroxyacid dehydrogenase family protein; alcohol dehydrogenase 2004911 6201164 Bind_1770 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001832887.1 2003853 R 395963 CDS YP_001832888.1 182678742 6200239 2005263..2006156 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_3337 transcriptional regulator, LysR family; LysR family transcriptional regulator 2006156 6200239 Bind_1771 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832888.1 2005263 D 395963 CDS YP_001832889.1 182678743 6201161 2006406..2009351 1 NC_010581.1 KEGG: scl:sce2280 hypothetical WD-repeat protein alr2800; WD repeat-containing protein 2009351 6201161 Bind_1772 Beijerinckia indica subsp. indica ATCC 9039 WD repeat-containing protein YP_001832889.1 2006406 D 395963 CDS YP_001832890.1 182678744 6199342 complement(2009514..2010773) 1 NC_010581.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: rle:RL3363 putative mannose-6-phosphate isomerase; N-acylglucosamine 2-epimerase 2010773 6199342 Bind_1773 Beijerinckia indica subsp. indica ATCC 9039 N-acylglucosamine 2-epimerase YP_001832890.1 2009514 R 395963 CDS YP_001832891.1 182678745 6199501 complement(2011050..2012027) 1 NC_010581.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2012027 hisG 6199501 hisG Beijerinckia indica subsp. indica ATCC 9039 ATP phosphoribosyltransferase YP_001832891.1 2011050 R 395963 CDS YP_001832892.1 182678746 6201234 complement(2012027..2013166) 1 NC_010581.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: bja:blr7524 ATP phosphoribosyltransferase regulatory subunit; tRNA synthetase class II (G H P and S) 2013166 6201234 Bind_1775 Beijerinckia indica subsp. indica ATCC 9039 tRNA synthetase class II (G H P and S) YP_001832892.1 2012027 R 395963 CDS YP_001832893.1 182678747 6199119 complement(2013291..2014793) 1 NC_010581.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2014793 hisS 6199119 hisS Beijerinckia indica subsp. indica ATCC 9039 histidyl-tRNA synthetase YP_001832893.1 2013291 R 395963 CDS YP_001832894.1 182678748 6199818 2015182..2016036 1 NC_010581.1 KEGG: atc:AGR_C_4127 hypothetical protein; putative periplasmic ligand-binding sensor protein 2016036 6199818 Bind_1777 Beijerinckia indica subsp. indica ATCC 9039 putative periplasmic ligand-binding sensor protein YP_001832894.1 2015182 D 395963 CDS YP_001832895.1 182678749 6199597 2016552..2017991 1 NC_010581.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cak:Caul_0933 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2017991 6199597 Bind_1778 Beijerinckia indica subsp. indica ATCC 9039 DEAD/DEAH box helicase YP_001832895.1 2016552 D 395963 CDS YP_001832896.1 182678750 6200724 complement(2018103..2019053) 1 NC_010581.1 KEGG: azo:azo1501 hypothetical protein; hypothetical protein 2019053 6200724 Bind_1779 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832896.1 2018103 R 395963 CDS YP_001832897.1 182678751 6198794 complement(2019127..2019882) 1 NC_010581.1 PFAM: protein of unknown function UPF0153; KEGG: mca:MCA0219 hypothetical protein; hypothetical protein 2019882 6198794 Bind_1780 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832897.1 2019127 R 395963 CDS YP_001832898.1 182678752 6200766 complement(2020116..2020814) 1 NC_010581.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: hne:HNE_1522 alkylated DNA repair protein AlkB; 2OG-Fe(II) oxygenase 2020814 6200766 Bind_1781 Beijerinckia indica subsp. indica ATCC 9039 2OG-Fe(II) oxygenase YP_001832898.1 2020116 R 395963 CDS YP_001832899.1 182678753 6199893 complement(2021266..2021505) 1 NC_010581.1 PFAM: protein of unknown function DUF1467; KEGG: bja:bsl4900 hypothetical protein; hypothetical protein 2021505 6199893 Bind_1782 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832899.1 2021266 R 395963 CDS YP_001832900.1 182678754 6200935 2022004..2022603 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2022603 6200935 Bind_1783 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001832900.1 2022004 D 395963 CDS YP_001832901.1 182678755 6201846 complement(2022677..2023057) 1 NC_010581.1 PFAM: protein of unknown function DUF971; KEGG: bcs:BCAN_A0971 protein of unknown function DUF971; hypothetical protein 2023057 6201846 Bind_1784 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832901.1 2022677 R 395963 CDS YP_001832902.1 182678756 6201346 2023172..2024227 1 NC_010581.1 KEGG: xau:Xaut_1387 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2024227 6201346 Bind_1785 Beijerinckia indica subsp. indica ATCC 9039 molybdenum cofactor biosynthesis protein A YP_001832902.1 2023172 D 395963 CDS YP_001832903.1 182678757 6200452 complement(2024406..2025491) 1 NC_010581.1 KEGG: bcs:BCAN_A0058 nucleotide-binding protein-like protein; hypothetical protein 2025491 6200452 Bind_1786 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832903.1 2024406 R 395963 CDS YP_001832904.1 182678758 6199634 2026010..2026855 1 NC_010581.1 PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00118 probable amino acid ABC transporter, substrate-binding protein; extracellular solute-binding protein 2026855 6199634 Bind_1787 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001832904.1 2026010 D 395963 CDS YP_001832905.1 182678759 6200819 2026970..2027845 1 NC_010581.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpb:RPB_3394 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2027845 6200819 Bind_1788 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxyisobutyrate dehydrogenase YP_001832905.1 2026970 D 395963 CDS YP_001832906.1 182678760 6201785 complement(2027924..2028424) 1 NC_010581.1 KEGG: mex:Mext_4236 hypothetical protein; hypothetical protein 2028424 6201785 Bind_1789 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832906.1 2027924 R 395963 CDS YP_001832907.1 182678761 6199509 complement(2028430..2029494) 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_4237 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2029494 6199509 Bind_1790 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001832907.1 2028430 R 395963 CDS YP_001832908.1 182678762 6200438 complement(2029613..2030521) 1 NC_010581.1 PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849; hypothetical protein 2030521 6200438 Bind_1791 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832908.1 2029613 R 395963 CDS YP_001832909.1 182678763 6198800 2030661..2031131 1 NC_010581.1 PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP; endoribonuclease L-PSP 2031131 6198800 Bind_1792 Beijerinckia indica subsp. indica ATCC 9039 endoribonuclease L-PSP YP_001832909.1 2030661 D 395963 CDS YP_001832910.1 182678764 6198758 2031131..2031880 1 NC_010581.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2031880 6198758 Bind_1793 Beijerinckia indica subsp. indica ATCC 9039 glycerophosphoryl diester phosphodiesterase YP_001832910.1 2031131 D 395963 CDS YP_001832911.1 182678765 6198687 2032037..2033680 1 NC_010581.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: dps:DP2330 similar to indole-3-pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 2033680 6198687 Bind_1794 Beijerinckia indica subsp. indica ATCC 9039 thiamine pyrophosphate binding domain-containing protein YP_001832911.1 2032037 D 395963 CDS YP_001832912.1 182678766 6198874 complement(2033732..2034421) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1064 ABC transporter related; ABC transporter-like protein 2034421 6198874 Bind_1795 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001832912.1 2033732 R 395963 CDS YP_001832913.1 182678767 6200493 complement(2034418..2035737) 1 NC_010581.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_2428 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 2035737 6200493 Bind_1796 Beijerinckia indica subsp. indica ATCC 9039 LolC/E family lipoprotein releasing system, transmembrane protein YP_001832913.1 2034418 R 395963 CDS YP_001832914.1 182678768 6200401 complement(2035734..2037053) 1 NC_010581.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2037053 6200401 Bind_1797 Beijerinckia indica subsp. indica ATCC 9039 prolyl-tRNA synthetase YP_001832914.1 2035734 R 395963 CDS YP_001832915.1 182678769 6198802 2037526..2039373 1 NC_010581.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: acr:Acry_2590 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2039373 6198802 Bind_1798 Beijerinckia indica subsp. indica ATCC 9039 methyl-accepting chemotaxis sensory transducer YP_001832915.1 2037526 D 395963 CDS YP_001832916.1 182678770 6198626 complement(2039421..2040914) 1 NC_010581.1 hypothetical protein 2040914 6198626 Bind_1799 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832916.1 2039421 R 395963 CDS YP_001832917.1 182678771 6199864 complement(2041165..2042457) 1 NC_010581.1 PFAM: glycosyl transferase family 28; KEGG: gvi:glr3757 probable glucosyltransferase; glycosyl transferase family protein 2042457 6199864 Bind_1800 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001832917.1 2041165 R 395963 CDS YP_001832918.1 182678772 6200964 complement(2042593..2044428) 1 NC_010581.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rpd:RPD_2618 D-fructose-6-phosphate amidotransferase; glucosamine--fructose-6-phosphate aminotransferase 2044428 6200964 Bind_1801 Beijerinckia indica subsp. indica ATCC 9039 glucosamine--fructose-6-phosphate aminotransferase YP_001832918.1 2042593 R 395963 CDS YP_001832919.1 182678773 6201728 complement(2044580..2045938) 1 NC_010581.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: xau:Xaut_4419 nucleotidyl transferase; UDP-N-acetylglucosamine pyrophosphorylase 2045938 6201728 Bind_1802 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylglucosamine pyrophosphorylase YP_001832919.1 2044580 R 395963 CDS YP_001832920.1 182678774 6200553 complement(2045935..2046204) 1 NC_010581.1 hypothetical protein 2046204 6200553 Bind_1803 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832920.1 2045935 R 395963 CDS YP_001832921.1 182678775 6200535 2046342..2047952 1 NC_010581.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 2047952 mdoD 6200535 mdoD Beijerinckia indica subsp. indica ATCC 9039 glucan biosynthesis protein D YP_001832921.1 2046342 D 395963 CDS YP_001832922.1 182678776 6201524 2047940..2050165 1 NC_010581.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2050165 6201524 Bind_1805 Beijerinckia indica subsp. indica ATCC 9039 glucosyltransferase MdoH YP_001832922.1 2047940 D 395963 CDS YP_001832923.1 182678777 6199678 2050694..2051521 1 NC_010581.1 KEGG: lpf:lpl2472 hypothetical protein; hypothetical protein 2051521 6199678 Bind_1806 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832923.1 2050694 D 395963 CDS YP_001832924.1 182678778 6198680 2052139..2053515 1 NC_010581.1 PFAM: cytochrome P450; KEGG: atc:AGR_C_2890 cytochrome P450 hydroxylase; cytochrome P450 2053515 6198680 Bind_1807 Beijerinckia indica subsp. indica ATCC 9039 cytochrome P450 YP_001832924.1 2052139 D 395963 CDS YP_001832925.1 182678779 6201004 complement(2053633..2054319) 1 NC_010581.1 PFAM: Ion transport 2 domain protein; KEGG: ppd:Ppro_0413 ion transport 2 domain protein; Ion transport 2 domain-containing protein 2054319 6201004 Bind_1808 Beijerinckia indica subsp. indica ATCC 9039 Ion transport 2 domain-containing protein YP_001832925.1 2053633 R 395963 CDS YP_001832926.1 182678780 6199368 complement(2054620..2057298) 1 NC_010581.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 2057298 6199368 Bind_1809 Beijerinckia indica subsp. indica ATCC 9039 pyruvate phosphate dikinase YP_001832926.1 2054620 R 395963 CDS YP_001832927.1 182678781 6199122 complement(2057528..2058124) 1 NC_010581.1 KEGG: mes:Meso_0149 hypothetical protein; hypothetical protein 2058124 6199122 Bind_1810 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832927.1 2057528 R 395963 CDS YP_001832928.1 182678782 6201246 2059384..2061312 1 NC_010581.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2061312 6201246 Bind_1811 Beijerinckia indica subsp. indica ATCC 9039 1-deoxy-D-xylulose-5-phosphate synthase YP_001832928.1 2059384 D 395963 CDS YP_001832929.1 182678783 6200729 2061305..2061796 1 NC_010581.1 hypothetical protein 2061796 6200729 Bind_1812 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832929.1 2061305 D 395963 CDS YP_001832930.1 182678784 6200861 2061806..2062576 1 NC_010581.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: xau:Xaut_4163 hemolysin A; hemolysin A 2062576 6200861 Bind_1813 Beijerinckia indica subsp. indica ATCC 9039 hemolysin A YP_001832930.1 2061806 D 395963 CDS YP_001832931.1 182678785 6200298 2062576..2063868 1 NC_010581.1 KEGG: xau:Xaut_4164 putative RNA methyltransferase; putative RNA methyltransferase 2063868 6200298 Bind_1814 Beijerinckia indica subsp. indica ATCC 9039 putative RNA methyltransferase YP_001832931.1 2062576 D 395963 CDS YP_001832932.1 182678786 6199254 2064093..2064548 1 NC_010581.1 KEGG: rsq:Rsph17025_4208 hypothetical protein; hypothetical protein 2064548 6199254 Bind_1815 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832932.1 2064093 D 395963 CDS YP_001832933.1 182678787 6200127 complement(2064611..2065552) 1 NC_010581.1 KEGG: mex:Mext_2318 hypothetical protein; hypothetical protein 2065552 6200127 Bind_1816 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832933.1 2064611 R 395963 CDS YP_001832934.1 182678788 6200738 complement(2065539..2068004) 1 NC_010581.1 KEGG: cph:Cpha266_2437 hypothetical protein; hypothetical protein 2068004 6200738 Bind_1817 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832934.1 2065539 R 395963 CDS YP_001832935.1 182678789 6198897 2068501..2069127 1 NC_010581.1 PFAM: nitroreductase; KEGG: bbt:BBta_5206 hypothetical protein; nitroreductase 2069127 6198897 Bind_1818 Beijerinckia indica subsp. indica ATCC 9039 nitroreductase YP_001832935.1 2068501 D 395963 CDS YP_001832936.1 182678790 6199783 complement(2069268..2069573) 1 NC_010581.1 KEGG: rpa:RPA3602 hypothetical protein; hypothetical protein 2069573 6199783 Bind_1819 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832936.1 2069268 R 395963 CDS YP_001832937.1 182678791 6201080 complement(2070387..2071778) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: bbt:BBta_3039 putative succinate-semialdehyde dehydrogenase; aldehyde dehydrogenase 2071778 6201080 Bind_1820 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001832937.1 2070387 R 395963 CDS YP_001832938.1 182678792 6200164 complement(2071846..2072037) 1 NC_010581.1 hypothetical protein 2072037 6200164 Bind_1821 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832938.1 2071846 R 395963 CDS YP_001832939.1 182678793 6200329 2072827..2073894 1 NC_010581.1 KEGG: cpv:cgd8_1100 NRAP like nucleolar RNA associated protein; hypothetical protein 2073894 6200329 Bind_1822 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832939.1 2072827 D 395963 CDS YP_001832940.1 182678794 6198960 complement(2074465..2075088) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2774 putative glutathionine S-transferase; glutathione S-transferase domain-containing protein 2075088 6198960 Bind_1824 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001832940.1 2074465 R 395963 CDS YP_001832941.1 182678795 6199511 complement(2075228..2076064) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr1899 short chain dehydrogenase; short chain dehydrogenase 2076064 6199511 Bind_1825 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001832941.1 2075228 R 395963 CDS YP_001832942.1 182678796 6200761 complement(2076123..2076980) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0550 putative hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2076980 6200761 Bind_1826 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832942.1 2076123 R 395963 CDS YP_001832943.1 182678797 6200566 complement(2077073..2077534) 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: mlo:mlr1898 probable transcriptional regulator; MarR family transcriptional regulator 2077534 6200566 Bind_1827 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001832943.1 2077073 R 395963 CDS YP_001832944.1 182678798 6200436 complement(2077577..2078458) 1 NC_010581.1 PFAM: NmrA family protein; KEGG: mlo:mlr1895 hypothetical protein; NmrA family protein 2078458 6200436 Bind_1828 Beijerinckia indica subsp. indica ATCC 9039 NmrA family protein YP_001832944.1 2077577 R 395963 CDS YP_001832945.1 182678799 6198588 complement(2078700..2079659) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1385 transcriptional regulator, AraC family; AraC family transcriptional regulator 2079659 6198588 Bind_1829 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001832945.1 2078700 R 395963 CDS YP_001832946.1 182678800 6199578 2079759..2080502 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_C1384 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2080502 6199578 Bind_1830 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001832946.1 2079759 D 395963 CDS YP_001832947.1 182678801 6199667 2082005..2083471 1 NC_010581.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bja:blr4890 hypothetical protein; hypothetical protein 2083471 6199667 Bind_1832 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832947.1 2082005 D 395963 CDS YP_001832948.1 182678802 6200393 complement(2083888..2084772) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3852 putative transcriptional regulator, LysR family; LysR family transcriptional regulator 2084772 6200393 Bind_1833 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001832948.1 2083888 R 395963 CDS YP_001832949.1 182678803 6199510 2084932..2086059 1 NC_010581.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B1269 putative NADH-flavin oxidoreductase / NADH oxidase; NADH:flavin oxidoreductase 2086059 6199510 Bind_1834 Beijerinckia indica subsp. indica ATCC 9039 NADH:flavin oxidoreductase YP_001832949.1 2084932 D 395963 CDS YP_001832950.1 182678804 6200435 2086100..2087089 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1273 putative oxidoreductase; alcohol dehydrogenase 2087089 6200435 Bind_1835 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001832950.1 2086100 D 395963 CDS YP_001832951.1 182678805 6198454 2087879..2090263 1 NC_010581.1 KEGG: oan:Oant_3233 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 2090263 6198454 Bind_1836 Beijerinckia indica subsp. indica ATCC 9039 heavy metal translocating P-type ATPase YP_001832951.1 2087879 D 395963 CDS YP_001832952.1 182678806 6200497 2090393..2092516 1 NC_010581.1 KEGG: bte:BTH_I1762 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific 2092516 6200497 Bind_1837 Beijerinckia indica subsp. indica ATCC 9039 phospholipase C, phosphocholine-specific YP_001832952.1 2090393 D 395963 CDS YP_001832953.1 182678807 6200208 2093612..2094298 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fre:Franean1_2518 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2094298 6200208 Bind_1839 Beijerinckia indica subsp. indica ATCC 9039 alkyl hydroperoxide reductase YP_001832953.1 2093612 D 395963 CDS YP_001832954.1 182678808 6200229 complement(2094587..2095528) 1 NC_010581.1 PFAM: RimK domain protein ATP-grasp; KEGG: ade:Adeh_2122 hypothetical protein; RimK domain-containing protein 2095528 6200229 Bind_1840 Beijerinckia indica subsp. indica ATCC 9039 RimK domain-containing protein YP_001832954.1 2094587 R 395963 CDS YP_001832955.1 182678809 6201081 complement(2095555..2096055) 1 NC_010581.1 hypothetical protein 2096055 6201081 Bind_1841 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832955.1 2095555 R 395963 CDS YP_001832956.1 182678810 6200655 complement(2096521..2097087) 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_3834 redoxin domain protein; redoxin domain-containing protein 2097087 6200655 Bind_1843 Beijerinckia indica subsp. indica ATCC 9039 redoxin domain-containing protein YP_001832956.1 2096521 R 395963 CDS YP_001832957.1 182678811 6199483 2097378..2098625 1 NC_010581.1 PFAM: Methyltransferase type 11; KEGG: mag:amb2283 hypothetical protein; type 11 methyltransferase 2098625 6199483 Bind_1844 Beijerinckia indica subsp. indica ATCC 9039 type 11 methyltransferase YP_001832957.1 2097378 D 395963 CDS YP_001832958.1 182678812 6198436 2098706..2100460 1 NC_010581.1 PFAM: Cephalosporin hydroxylase; KEGG: syw:SYNW0087 hypothetical protein; cephalosporin hydroxylase 2100460 6198436 Bind_1845 Beijerinckia indica subsp. indica ATCC 9039 cephalosporin hydroxylase YP_001832958.1 2098706 D 395963 CDS YP_001832959.1 182678813 6200820 2101023..2103578 1 NC_010581.1 PFAM: TonB-dependent receptor; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 2103578 6200820 Bind_1846 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001832959.1 2101023 D 395963 CDS YP_001832960.1 182678814 6200545 2104084..2105232 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: smd:Smed_5653 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 2105232 6200545 Bind_1847 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001832960.1 2104084 D 395963 CDS YP_001832961.1 182678815 6198485 2105250..2106692 1 NC_010581.1 KEGG: bbt:BBta_4836 hypothetical protein; hypothetical protein 2106692 6198485 Bind_1848 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832961.1 2105250 D 395963 CDS YP_001832962.1 182678816 6199649 2106799..2108157 1 NC_010581.1 KEGG: bbt:BBta_4857 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 2108157 6199649 Bind_1849 Beijerinckia indica subsp. indica ATCC 9039 nitrilotriacetate monooxygenase component A YP_001832962.1 2106799 D 395963 CDS YP_001832963.1 182678817 6199844 2108195..2108542 1 NC_010581.1 KEGG: xau:Xaut_2769 hypothetical protein; hypothetical protein 2108542 6199844 Bind_1850 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832963.1 2108195 D 395963 CDS YP_001832964.1 182678818 6198744 2108597..2109955 1 NC_010581.1 KEGG: bxe:Bxe_A2175 putative nitrilotriacetate monooxygenase component A, NtaA/SnaA/SoxA/DszA family; nitrilotriacetate monooxygenase component A 2109955 6198744 Bind_1851 Beijerinckia indica subsp. indica ATCC 9039 nitrilotriacetate monooxygenase component A YP_001832964.1 2108597 D 395963 CDS YP_001832965.1 182678819 6201482 2109996..2110862 1 NC_010581.1 PFAM: nitroreductase; KEGG: cau:Caur_3170 nitroreductase; nitroreductase 2110862 6201482 Bind_1852 Beijerinckia indica subsp. indica ATCC 9039 nitroreductase YP_001832965.1 2109996 D 395963 CDS YP_001832966.1 182678820 6198662 2110989..2112239 1 NC_010581.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: smd:Smed_5663 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 2112239 6198662 Bind_1853 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001832966.1 2110989 D 395963 CDS YP_001832967.1 182678821 6199816 2112332..2113501 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: atc:AGR_L_2763 hypothetical protein; luciferase-like monooxygenase 2113501 6199816 Bind_1854 Beijerinckia indica subsp. indica ATCC 9039 luciferase-like monooxygenase YP_001832967.1 2112332 D 395963 CDS YP_001832968.1 182678822 6200591 2113810..2114997 1 NC_010581.1 KEGG: bvi:Bcep1808_6885 hypothetical protein; hypothetical protein 2114997 6200591 Bind_1855 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832968.1 2113810 D 395963 CDS YP_001832969.1 182678823 6199269 2115469..2116671 1 NC_010581.1 PFAM: Patatin; KEGG: bja:blr2776 putative patatin-like phospholipase; patatin 2116671 6199269 Bind_1856 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001832969.1 2115469 D 395963 CDS YP_001832970.1 182678824 6199590 2117253..2117492 1 NC_010581.1 hypothetical protein 2117492 6199590 Bind_1857 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832970.1 2117253 D 395963 CDS YP_001832971.1 182678825 6201097 complement(2117674..2119515) 1 NC_010581.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: ret:RHE_CH00633 putative potassium-efflux system protein; sodium/hydrogen exchanger 2119515 6201097 Bind_1858 Beijerinckia indica subsp. indica ATCC 9039 sodium/hydrogen exchanger YP_001832971.1 2117674 R 395963 CDS YP_001832972.1 182678826 6200938 complement(2119623..2120480) 1 NC_010581.1 PFAM: UspA domain protein; KEGG: mfa:Mfla_2660 UspA; UspA domain-containing protein 2120480 6200938 Bind_1859 Beijerinckia indica subsp. indica ATCC 9039 UspA domain-containing protein YP_001832972.1 2119623 R 395963 CDS YP_001832973.1 182678827 6200574 2120809..2121579 1 NC_010581.1 KEGG: bpd:BURPS668_3911 hypothetical protein; hypothetical protein 2121579 6200574 Bind_1860 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832973.1 2120809 D 395963 CDS YP_001832974.1 182678828 6201303 2122026..2122259 1 NC_010581.1 hypothetical protein 2122259 6201303 Bind_1861 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832974.1 2122026 D 395963 CDS YP_001832975.1 182678829 6200768 2122342..2122611 1 NC_010581.1 KEGG: xau:Xaut_0099 hypothetical protein; hypothetical protein 2122611 6200768 Bind_1862 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832975.1 2122342 D 395963 CDS YP_001832976.1 182678830 6201025 complement(2122727..2123755) 1 NC_010581.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_2814 putative exopolysaccharide regulatory protein; Sel1 domain-containing protein 2123755 6201025 Bind_1863 Beijerinckia indica subsp. indica ATCC 9039 Sel1 domain-containing protein YP_001832976.1 2122727 R 395963 CDS YP_001832977.1 182678831 6200071 2124129..2125541 1 NC_010581.1 KEGG: nwi:Nwi_0986 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2125541 6200071 Bind_1864 Beijerinckia indica subsp. indica ATCC 9039 pyruvate kinase YP_001832977.1 2124129 D 395963 CDS YP_001832978.1 182678832 6200321 2125553..2126569 1 NC_010581.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bba:Bd0664 similar to lipase LipA; alpha/beta hydrolase domain-containing protein 2126569 6200321 Bind_1865 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase domain-containing protein YP_001832978.1 2125553 D 395963 CDS YP_001832979.1 182678833 6201374 2126705..2127697 1 NC_010581.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 2127697 6201374 Bind_1866 Beijerinckia indica subsp. indica ATCC 9039 UDP-glucose 4-epimerase YP_001832979.1 2126705 D 395963 CDS YP_001832980.1 182678834 6198767 2127740..2128543 1 NC_010581.1 KEGG: pha:PSHAa1036 hypothetical protein ; membrane protein; hypothetical protein 2128543 6198767 Bind_1867 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832980.1 2127740 D 395963 CDS YP_001832981.1 182678835 6198852 complement(2128559..2129680) 1 NC_010581.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2129680 6198852 Bind_1868 Beijerinckia indica subsp. indica ATCC 9039 chorismate synthase YP_001832981.1 2128559 R 395963 CDS YP_001832982.1 182678836 6201328 complement(2129732..2130208) 1 NC_010581.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2130208 smpB 6201328 smpB Beijerinckia indica subsp. indica ATCC 9039 SsrA-binding protein YP_001832982.1 2129732 R 395963 CDS YP_001832983.1 182678837 6199279 complement(2130219..2131112) 1 NC_010581.1 KEGG: rpb:RPB_2602 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 2131112 6199279 Bind_1870 Beijerinckia indica subsp. indica ATCC 9039 dihydrodipicolinate synthase YP_001832983.1 2130219 R 395963 CDS YP_001832984.1 182678838 6199553 2131515..2133686 1 NC_010581.1 PFAM: Lytic transglycosylase catalytic; KEGG: mex:Mext_3190 lytic transglycosylase catalytic; lytic transglycosylase 2133686 6199553 Bind_1871 Beijerinckia indica subsp. indica ATCC 9039 lytic transglycosylase YP_001832984.1 2131515 D 395963 CDS YP_001832985.1 182678839 6199759 2133891..2134790 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_1013 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2134790 6199759 Bind_1872 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001832985.1 2133891 D 395963 CDS YP_001832986.1 182678840 6200851 complement(2135091..2136641) 1 NC_010581.1 PFAM: porin; KEGG: mex:Mext_3186 porin; porin 2136641 6200851 Bind_1873 Beijerinckia indica subsp. indica ATCC 9039 porin YP_001832986.1 2135091 R 395963 CDS YP_001832987.1 182678841 6201114 2137698..2138375 1 NC_010581.1 KEGG: mex:Mext_2011 hypothetical protein; hypothetical protein 2138375 6201114 Bind_1874 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832987.1 2137698 D 395963 CDS YP_001832988.1 182678842 6201145 2138484..2139023 1 NC_010581.1 KEGG: osa:4326983 Os01g0329300; hypothetical protein 2139023 6201145 Bind_1875 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832988.1 2138484 D 395963 CDS YP_001832989.1 182678843 6201003 2139267..2140037 1 NC_010581.1 KEGG: xcc:XCC2874 hypothetical protein; hypothetical protein 2140037 6201003 Bind_1876 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832989.1 2139267 D 395963 CDS YP_001832990.1 182678844 6201083 complement(2140541..2142028) 1 NC_010581.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B 2142028 6201083 Bind_1877 Beijerinckia indica subsp. indica ATCC 9039 glutamyl-tRNA(Gln) amidotransferase subunit B YP_001832990.1 2140541 R 395963 CDS YP_001832991.1 182678845 6199894 complement(2142132..2143613) 1 NC_010581.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2143613 gatA 6199894 gatA Beijerinckia indica subsp. indica ATCC 9039 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001832991.1 2142132 R 395963 CDS YP_001832992.1 182678846 6200863 complement(2143669..2143956) 1 NC_010581.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: nha:Nham_2277 aspartyl/glutamyl-tRNA amidotransferase subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C 2143956 6200863 Bind_1879 Beijerinckia indica subsp. indica ATCC 9039 glutamyl-tRNA(Gln) amidotransferase subunit C YP_001832992.1 2143669 R 395963 CDS YP_001832993.1 182678847 6199785 2144108..2144737 1 NC_010581.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: smd:Smed_1240 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 2144737 6199785 Bind_1880 Beijerinckia indica subsp. indica ATCC 9039 multiple antibiotic resistance (MarC)-like protein YP_001832993.1 2144108 D 395963 CDS YP_001832994.1 182678848 6201804 2144828..2145487 1 NC_010581.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: reh:H16_A0049 putative protein-S-isoprenylcysteine methyltransferase; isoprenylcysteine carboxyl methyltransferase 2145487 6201804 Bind_1881 Beijerinckia indica subsp. indica ATCC 9039 isoprenylcysteine carboxyl methyltransferase YP_001832994.1 2144828 D 395963 CDS YP_001832995.1 182678849 6200962 2145871..2147829 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; KEGG: pla:Plav_1935 integral membrane sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 2147829 6200962 Bind_1882 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor signal transduction histidine kinase YP_001832995.1 2145871 D 395963 CDS YP_001832996.1 182678850 6199855 2147826..2148578 1 NC_010581.1 PFAM: response regulator receiver; KEGG: scl:sce5166 two component response regulator; response regulator receiver protein 2148578 6199855 Bind_1883 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001832996.1 2147826 D 395963 CDS YP_001832997.1 182678851 6199912 2148575..2149744 1 NC_010581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb2850 signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2149744 6199912 Bind_1884 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver sensor signal transduction histidine kinase YP_001832997.1 2148575 D 395963 CDS YP_001832998.1 182678852 6198688 complement(2149773..2151725) 1 NC_010581.1 PFAM: malate synthase; KEGG: aeh:Mlg_1646 malate synthase G; malate synthase 2151725 6198688 Bind_1885 Beijerinckia indica subsp. indica ATCC 9039 malate synthase YP_001832998.1 2149773 R 395963 CDS YP_001832999.1 182678853 6198587 complement(2151903..2152796) 1 NC_010581.1 hypothetical protein 2152796 6198587 Bind_1886 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001832999.1 2151903 R 395963 CDS YP_001833000.1 182678854 6199890 2152992..2153375 1 NC_010581.1 PFAM: regulatory protein ArsR; KEGG: stp:Strop_3509 regulatory protein, ArsR; ArsR family transcriptional regulator 2153375 6199890 Bind_1887 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001833000.1 2152992 D 395963 CDS YP_001833001.1 182678855 6199992 2153368..2153595 1 NC_010581.1 hypothetical protein 2153595 6199992 Bind_1888 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833001.1 2153368 D 395963 CDS YP_001833002.1 182678856 6199757 2153630..2153968 1 NC_010581.1 KEGG: bch:Bcen2424_5421 hypothetical protein; hypothetical protein 2153968 6199757 Bind_1889 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833002.1 2153630 D 395963 CDS YP_001833003.1 182678857 6201152 2153976..2154407 1 NC_010581.1 KEGG: pol:Bpro_0110 hypothetical protein; hypothetical protein 2154407 6201152 Bind_1890 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833003.1 2153976 D 395963 CDS YP_001833004.1 182678858 6199711 complement(2154410..2154991) 1 NC_010581.1 PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase; carbonic anhydrase 2154991 6199711 Bind_1891 Beijerinckia indica subsp. indica ATCC 9039 carbonic anhydrase YP_001833004.1 2154410 R 395963 CDS YP_001833005.1 182678859 6201291 complement(2155165..2155896) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: kra:Krad_0136 transcriptional regulator, TetR family; TetR family transcriptional regulator 2155896 6201291 Bind_1892 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833005.1 2155165 R 395963 CDS YP_001833006.1 182678860 6200427 2155985..2156842 1 NC_010581.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: scl:sce1557 hypothetical protein; NmrA family protein 2156842 6200427 Bind_1893 Beijerinckia indica subsp. indica ATCC 9039 NmrA family protein YP_001833006.1 2155985 D 395963 CDS YP_001833007.1 182678861 6201358 complement(2156921..2159764) 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: ppr:PBPRB0014 hypothetical acyltransferase family protein; AMP-dependent synthetase and ligase 2159764 6201358 Bind_1894 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001833007.1 2156921 R 395963 CDS YP_001833008.1 182678862 6201539 complement(2160130..2160627) 1 NC_010581.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 2160627 6201539 Bind_1895 Beijerinckia indica subsp. indica ATCC 9039 Holliday junction resolvase-like protein YP_001833008.1 2160130 R 395963 CDS YP_001833009.1 182678863 6200109 2160741..2162090 1 NC_010581.1 KEGG: afw:Anae109_0029 major facilitator superfamily MFS_1; major facilitator transporter 2162090 6200109 Bind_1896 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833009.1 2160741 D 395963 CDS YP_001833010.1 182678864 6200822 complement(2162193..2162987) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: lpf:lpl0291 hypothetical protein; alpha/beta hydrolase fold protein 2162987 6200822 Bind_1897 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001833010.1 2162193 R 395963 CDS YP_001833011.1 182678865 6199576 2163535..2165718 1 NC_010581.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2165718 6199576 Bind_1898 Beijerinckia indica subsp. indica ATCC 9039 malate synthase G YP_001833011.1 2163535 D 395963 CDS YP_001833012.1 182678866 6200732 2166075..2167565 1 NC_010581.1 PFAM: FAD linked oxidase domain protein; KEGG: swi:Swit_0991 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 2167565 6200732 Bind_1899 Beijerinckia indica subsp. indica ATCC 9039 D-lactate dehydrogenase YP_001833012.1 2166075 D 395963 CDS YP_001833013.1 182678867 6200121 2167670..2168983 1 NC_010581.1 PFAM: FAD linked oxidase domain protein; KEGG: mes:Meso_0363 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2168983 6200121 Bind_1900 Beijerinckia indica subsp. indica ATCC 9039 FAD linked oxidase domain-containing protein YP_001833013.1 2167670 D 395963 CDS YP_001833014.1 182678868 6198959 2168988..2170325 1 NC_010581.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit; hypothetical protein 2170325 6198959 Bind_1901 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833014.1 2168988 D 395963 CDS YP_001833015.1 182678869 6198606 complement(2170373..2171329) 1 NC_010581.1 PFAM: protein of unknown function DUF535; KEGG: esa:ESA_02461 hypothetical protein; hypothetical protein 2171329 6198606 Bind_1902 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833015.1 2170373 R 395963 CDS YP_001833016.1 182678870 6200537 complement(2171681..2171890) 1 NC_010581.1 PFAM: TOBE domain protein; KEGG: rpa:RPA4719 molybdo-pterin binding protein; TOBE domain-containing protein 2171890 6200537 Bind_1903 Beijerinckia indica subsp. indica ATCC 9039 TOBE domain-containing protein YP_001833016.1 2171681 R 395963 CDS YP_001833017.1 182678871 6199867 complement(2172525..2173484) 1 NC_010581.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2173484 ispH 6199867 ispH Beijerinckia indica subsp. indica ATCC 9039 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001833017.1 2172525 R 395963 CDS YP_001833018.1 182678872 6199664 2174039..2174341 1 NC_010581.1 PFAM: ferredoxin; KEGG: pna:Pnap_1587 ferredoxin; ferredoxin 2174341 6199664 Bind_1905 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin YP_001833018.1 2174039 D 395963 CDS YP_001833019.1 182678873 6199958 2174454..2175593 1 NC_010581.1 KEGG: amr:AM1_B0141 hypothetical protein; hypothetical protein 2175593 6199958 Bind_1906 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833019.1 2174454 D 395963 CDS YP_001833020.1 182678874 6200247 2175982..2176428 1 NC_010581.1 hypothetical protein 2176428 6200247 Bind_1907 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833020.1 2175982 D 395963 CDS YP_001833021.1 182678875 6198796 complement(2176461..2176916) 1 NC_010581.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pla:Plav_0645 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase 2176916 6198796 Bind_1908 Beijerinckia indica subsp. indica ATCC 9039 CMP/dCMP deaminase YP_001833021.1 2176461 R 395963 CDS YP_001833022.1 182678876 6199676 complement(2176921..2178939) 1 NC_010581.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3504 putative ABC multidrug transporter, fused ATPase and permease domains; ABC transporter-like protein 2178939 6199676 Bind_1909 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833022.1 2176921 R 395963 CDS YP_001833023.1 182678877 6200478 complement(2179196..2180344) 1 NC_010581.1 PFAM: Peptidoglycan-binding LysM; KEGG: bbt:BBta_3954 hypothetical protein; peptidoglycan-binding LysM 2180344 6200478 Bind_1910 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan-binding LysM YP_001833023.1 2179196 R 395963 CDS YP_001833024.1 182678878 6198799 2180466..2181095 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: rpa:RPA2004 hypothetical protein; hypothetical protein 2181095 6198799 Bind_1911 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833024.1 2180466 D 395963 CDS YP_001833025.1 182678879 6201313 2181098..2182834 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mac:MA3293 hypothetical protein; hypothetical protein 2182834 6201313 Bind_1912 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833025.1 2181098 D 395963 CDS YP_001833026.1 182678880 6199957 complement(2182847..2184457) 1 NC_010581.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bbt:BBta_3501 putative alpha-isopropylmalate/homocitrate synthase family transferase; putative alpha-isopropylmalate/homocitrate synthase family transferase 2184457 6199957 Bind_1913 Beijerinckia indica subsp. indica ATCC 9039 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_001833026.1 2182847 R 395963 CDS YP_001833027.1 182678881 6200168 complement(2184454..2184957) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2088 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2184957 6200168 Bind_1914 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001833027.1 2184454 R 395963 CDS YP_001833028.1 182678882 6199137 complement(2184954..2186330) 1 NC_010581.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2186330 cysS 6199137 cysS Beijerinckia indica subsp. indica ATCC 9039 cysteinyl-tRNA synthetase YP_001833028.1 2184954 R 395963 CDS YP_001833029.1 182678883 6200506 2186576..2186743 1 NC_010581.1 KEGG: rpb:RPB_4438 SpoVT/AbrB-like; SpoVT/AbrB-like protein 2186743 6200506 Bind_1916 Beijerinckia indica subsp. indica ATCC 9039 SpoVT/AbrB-like protein YP_001833029.1 2186576 D 395963 CDS YP_001833030.1 182678884 6200725 complement(2187150..2187662) 1 NC_010581.1 KEGG: tpe:Tpen_0017 nucleoside 2-deoxyribosyltransferase; hypothetical protein 2187662 6200725 Bind_1917 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833030.1 2187150 R 395963 CDS YP_001833031.1 182678885 6201126 complement(2187674..2188684) 1 NC_010581.1 KEGG: tcx:Tcr_0335 hypothetical protein; hypothetical protein 2188684 6201126 Bind_1918 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833031.1 2187674 R 395963 CDS YP_001833032.1 182678886 6200166 complement(2188650..2188913) 1 NC_010581.1 hypothetical protein 2188913 6200166 Bind_1919 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833032.1 2188650 R 395963 CDS YP_001833033.1 182678887 6198819 2189080..2190150 1 NC_010581.1 PFAM: Choloylglycine hydrolase; KEGG: dac:Daci_3467 choloylglycine hydrolase; choloylglycine hydrolase 2190150 6198819 Bind_1920 Beijerinckia indica subsp. indica ATCC 9039 choloylglycine hydrolase YP_001833033.1 2189080 D 395963 CDS YP_001833034.1 182678888 6201191 complement(2190284..2191576) 1 NC_010581.1 PFAM: Fmu (Sun) domain protein; KEGG: azc:AZC_3702 putative RNA methyltransferase; Fmu (Sun) domain-containing protein 2191576 6201191 Bind_1921 Beijerinckia indica subsp. indica ATCC 9039 Fmu (Sun) domain-containing protein YP_001833034.1 2190284 R 395963 CDS YP_001833035.1 182678889 6200727 complement(2191576..2192013) 1 NC_010581.1 PFAM: protein of unknown function DUF1123; KEGG: nha:Nham_2544 protein of unknown function DUF1123; hypothetical protein 2192013 6200727 Bind_1922 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833035.1 2191576 R 395963 CDS YP_001833036.1 182678890 6201849 complement(2192020..2193510) 1 NC_010581.1 KEGG: rpb:RPB_3193 inositol-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 2193510 6201849 Bind_1923 Beijerinckia indica subsp. indica ATCC 9039 inosine-5'-monophosphate dehydrogenase YP_001833036.1 2192020 R 395963 CDS YP_001833037.1 182678891 6198784 2193916..2195367 1 NC_010581.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3371 putative multidrug efflux protein; EmrB/QacA family drug resistance transporter 2195367 6198784 Bind_1924 Beijerinckia indica subsp. indica ATCC 9039 EmrB/QacA family drug resistance transporter YP_001833037.1 2193916 D 395963 CDS YP_001833038.1 182678892 6198836 2195534..2195968 1 NC_010581.1 PFAM: UspA domain protein; KEGG: bxe:Bxe_A3827 putative universal stress protein; UspA domain-containing protein 2195968 6198836 Bind_1925 Beijerinckia indica subsp. indica ATCC 9039 UspA domain-containing protein YP_001833038.1 2195534 D 395963 CDS YP_001833039.1 182678893 6200961 complement(2196006..2196710) 1 NC_010581.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 2196710 6200961 Bind_1926 Beijerinckia indica subsp. indica ATCC 9039 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001833039.1 2196006 R 395963 CDS YP_001833040.1 182678894 6200742 complement(2196721..2197857) 1 NC_010581.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2197857 6200742 Bind_1927 Beijerinckia indica subsp. indica ATCC 9039 Ppx/GppA phosphatase YP_001833040.1 2196721 R 395963 CDS YP_001833041.1 182678895 6200020 complement(2198117..2198794) 1 NC_010581.1 KEGG: azc:AZC_3364 hypothetical protein; hypothetical protein 2198794 6200020 Bind_1928 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833041.1 2198117 R 395963 CDS YP_001833042.1 182678896 6198804 2199043..2200827 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2200827 6198804 Bind_1929 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833042.1 2199043 D 395963 CDS YP_001833043.1 182678897 6200939 2200981..2202525 1 NC_010581.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bbt:BBta_5174 putative peptidase S10, serine carboxypeptidase; peptidase S10 serine carboxypeptidase 2202525 6200939 Bind_1930 Beijerinckia indica subsp. indica ATCC 9039 peptidase S10 serine carboxypeptidase YP_001833043.1 2200981 D 395963 CDS YP_001833044.1 182678898 6200361 complement(2202596..2202763) 1 NC_010581.1 KEGG: mca:MCA0267 hypothetical protein; hypothetical protein 2202763 6200361 Bind_1931 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833044.1 2202596 R 395963 CDS YP_001833045.1 182678899 6199577 2203038..2203637 1 NC_010581.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 2203637 6199577 Bind_1932 Beijerinckia indica subsp. indica ATCC 9039 TrpR binding protein WrbA YP_001833045.1 2203038 D 395963 CDS YP_001833046.1 182678900 6199401 2203678..2204301 1 NC_010581.1 PFAM: YceI family protein; KEGG: gdi:GDI1483 hypothetical protein; hypothetical protein 2204301 6199401 Bind_1933 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833046.1 2203678 D 395963 CDS YP_001833047.1 182678901 6199116 2204309..2204881 1 NC_010581.1 PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561; cytochrome B561 2204881 6199116 Bind_1934 Beijerinckia indica subsp. indica ATCC 9039 cytochrome B561 YP_001833047.1 2204309 D 395963 CDS YP_001833048.1 182678902 6201229 2204908..2205483 1 NC_010581.1 PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein; hypothetical protein 2205483 6201229 Bind_1935 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833048.1 2204908 D 395963 CDS YP_001833049.1 182678903 6200080 2206564..2207265 1 NC_010581.1 PFAM: Pirin domain protein; KEGG: gdi:GDI0848 hypothetical protein; pirin domain-containing protein 2207265 6200080 Bind_1937 Beijerinckia indica subsp. indica ATCC 9039 pirin domain-containing protein YP_001833049.1 2206564 D 395963 CDS YP_001833050.1 182678904 6199933 2207378..2208115 1 NC_010581.1 converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 2208115 6199933 Bind_1938 Beijerinckia indica subsp. indica ATCC 9039 acetoacetate decarboxylase YP_001833050.1 2207378 D 395963 CDS YP_001833051.1 182678905 6200087 complement(2208178..2209455) 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1147 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2209455 6200087 Bind_1939 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001833051.1 2208178 R 395963 CDS YP_001833052.1 182678906 6200180 2209639..2210337 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mex:Mext_3838 peroxiredoxin; peroxiredoxin 2210337 6200180 Bind_1940 Beijerinckia indica subsp. indica ATCC 9039 peroxiredoxin YP_001833052.1 2209639 D 395963 CDS YP_001833053.1 182678907 6199236 2210347..2211261 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00276 hypothetical protein; beta-lactamase domain-containing protein 2211261 6199236 Bind_1941 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001833053.1 2210347 D 395963 CDS YP_001833054.1 182678908 6201338 2211277..2211666 1 NC_010581.1 PFAM: regulatory protein ArsR; KEGG: bov:BOV_A0396 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2211666 6201338 Bind_1942 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001833054.1 2211277 D 395963 CDS YP_001833055.1 182678909 6201110 2211714..2212496 1 NC_010581.1 PFAM: protein of unknown function DUF81; KEGG: oan:Oant_4660 protein of unknown function DUF81; hypothetical protein 2212496 6201110 Bind_1943 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833055.1 2211714 D 395963 CDS YP_001833056.1 182678910 6200831 complement(2212630..2214888) 1 NC_010581.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2214888 6200831 Bind_1944 Beijerinckia indica subsp. indica ATCC 9039 DNA topoisomerase IV subunit A YP_001833056.1 2212630 R 395963 CDS YP_001833057.1 182678911 6200763 complement(2215119..2217605) 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpd:RPD_1639 tetratricopeptide TPR_2; hypothetical protein 2217605 6200763 Bind_1945 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833057.1 2215119 R 395963 CDS YP_001833058.1 182678912 6201199 complement(2217698..2219338) 1 NC_010581.1 PFAM: sulfatase; KEGG: bja:bll5074 putative arylsulfatase; sulfatase 2219338 6201199 Bind_1946 Beijerinckia indica subsp. indica ATCC 9039 sulfatase YP_001833058.1 2217698 R 395963 CDS YP_001833059.1 182678913 6200508 2220122..2220325 1 NC_010581.1 hypothetical protein 2220325 6200508 Bind_1947 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833059.1 2220122 D 395963 CDS YP_001833060.1 182678914 6201281 complement(2220503..2221693) 1 NC_010581.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2221693 6201281 Bind_1948 Beijerinckia indica subsp. indica ATCC 9039 elongation factor Tu YP_001833060.1 2220503 R 395963 CDS YP_001833061.1 182678915 6200112 complement(2221813..2222166) 1 NC_010581.1 KEGG: bbt:BBta_5892 hypothetical protein; hypothetical protein 2222166 6200112 Bind_1949 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833061.1 2221813 R 395963 CDS YP_001833062.1 182678916 6200476 2222370..2223065 1 NC_010581.1 PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: xau:Xaut_3496 leucyltransferase; leucyltransferase 2223065 6200476 Bind_1950 Beijerinckia indica subsp. indica ATCC 9039 leucyltransferase YP_001833062.1 2222370 D 395963 CDS YP_001833063.1 182678917 6198878 complement(2223079..2223822) 1 NC_010581.1 KEGG: mex:Mext_1100 conserved hypothetical protein; hypothetical protein 2223822 6198878 Bind_1951 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833063.1 2223079 R 395963 CDS YP_001833064.1 182678918 6201856 complement(2223885..2224286) 1 NC_010581.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: nwi:Nwi_1760 NADH-ubiquinone oxidoreductase; NADH:ubiquinone oxidoreductase subunit 2224286 6201856 Bind_1952 Beijerinckia indica subsp. indica ATCC 9039 NADH:ubiquinone oxidoreductase subunit YP_001833064.1 2223885 R 395963 CDS YP_001833065.1 182678919 6198774 2224447..2224902 1 NC_010581.1 PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein; LrgA family protein 2224902 6198774 Bind_1953 Beijerinckia indica subsp. indica ATCC 9039 LrgA family protein YP_001833065.1 2224447 D 395963 CDS YP_001833066.1 182678920 6199062 2224895..2225614 1 NC_010581.1 PFAM: LrgB family protein; KEGG: reu:Reut_A2795 LrgB-like protein; LrgB family protein 2225614 6199062 Bind_1954 Beijerinckia indica subsp. indica ATCC 9039 LrgB family protein YP_001833066.1 2224895 D 395963 CDS YP_001833067.1 182678921 6198970 2225851..2229561 1 NC_010581.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2229561 6198970 Bind_1955 Beijerinckia indica subsp. indica ATCC 9039 ribonucleotide-diphosphate reductase subunit alpha YP_001833067.1 2225851 D 395963 CDS YP_001833068.1 182678922 6198998 complement(2229728..2230513) 1 NC_010581.1 PFAM: peptidase S16 lon domain protein; KEGG: bbt:BBta_3560 putative ATP-dependent protease La; endopeptidase La 2230513 6198998 Bind_1956 Beijerinckia indica subsp. indica ATCC 9039 endopeptidase La YP_001833068.1 2229728 R 395963 CDS YP_001833069.1 182678923 6198795 complement(2230925..2231308) 1 NC_010581.1 hypothetical protein 2231308 6198795 Bind_1957 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833069.1 2230925 R 395963 CDS YP_001833070.1 182678924 6200191 2231802..2234252 1 NC_010581.1 KEGG: scl:sce7776 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2234252 6200191 Bind_1958 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor hybrid histidine kinase YP_001833070.1 2231802 D 395963 CDS YP_001833071.1 182678925 6198941 complement(2234311..2234964) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: reu:Reut_A0763 glutathione S-transferase, N-terminal; glutathione S-transferase domain-containing protein 2234964 6198941 Bind_1959 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001833071.1 2234311 R 395963 CDS YP_001833072.1 182678926 6199147 2235148..2236365 1 NC_010581.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mpt:Mpe_A1565 hypothetical protein; polyhydroxyalkanoate depolymerase 2236365 6199147 Bind_1960 Beijerinckia indica subsp. indica ATCC 9039 polyhydroxyalkanoate depolymerase YP_001833072.1 2235148 D 395963 CDS YP_001833073.1 182678927 6200316 complement(2236417..2238066) 1 NC_010581.1 PFAM: response regulator receiver; Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: hau:Haur_4511 Glu/Leu/Phe/Val dehydrogenase; response regulator receiver protein 2238066 6200316 Bind_1961 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001833073.1 2236417 R 395963 CDS YP_001833074.1 182678928 6200292 complement(2238196..2238891) 1 NC_010581.1 KEGG: rha:RHA1_ro00070 hypothetical protein; hypothetical protein 2238891 6200292 Bind_1962 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833074.1 2238196 R 395963 CDS YP_001833075.1 182678929 6199013 complement(2239031..2239759) 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2239759 6199013 Bind_1963 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001833075.1 2239031 R 395963 CDS YP_001833076.1 182678930 6200350 2239811..2240986 1 NC_010581.1 PFAM: amidinotransferase; KEGG: nwi:Nwi_2321 amidinotransferase; non-specific serine/threonine protein kinase 2240986 6200350 Bind_1964 Beijerinckia indica subsp. indica ATCC 9039 non-specific serine/threonine protein kinase YP_001833076.1 2239811 D 395963 CDS YP_001833077.1 182678931 6199935 complement(2241002..2241316) 1 NC_010581.1 PFAM: small multidrug resistance protein; KEGG: nha:Nham_1679 small multidrug resistance protein; small multidrug resistance protein 2241316 6199935 Bind_1965 Beijerinckia indica subsp. indica ATCC 9039 small multidrug resistance protein YP_001833077.1 2241002 R 395963 CDS YP_001833078.1 182678932 6200342 complement(2241394..2241903) 1 NC_010581.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gdi:GDI0166 putative molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 2241903 6200342 Bind_1966 Beijerinckia indica subsp. indica ATCC 9039 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001833078.1 2241394 R 395963 CDS YP_001833079.1 182678933 6201289 complement(2242035..2243003) 1 NC_010581.1 KEGG: cyb:CYB_0037 nitrate ABC transporter, ATP-binding protein NtrC; nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 2243003 6201289 Bind_1967 Beijerinckia indica subsp. indica ATCC 9039 nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein YP_001833079.1 2242035 R 395963 CDS YP_001833080.1 182678934 6200170 complement(2243000..2243581) 1 NC_010581.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: pat:Patl_2529 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 2243581 6200170 Bind_1968 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver/ANTAR domain-containing protein YP_001833080.1 2243000 R 395963 CDS YP_001833081.1 182678935 6200756 complement(2243590..2247531) 1 NC_010581.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mfa:Mfla_0317 molybdopterin oxidoreductase; molybdopterin oxidoreductase 2247531 6200756 Bind_1969 Beijerinckia indica subsp. indica ATCC 9039 molybdopterin oxidoreductase YP_001833081.1 2243590 R 395963 CDS YP_001833082.1 182678936 6200926 complement(2247597..2250497) 1 NC_010581.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppf:Pput_4015 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit 2250497 6200926 Bind_1970 Beijerinckia indica subsp. indica ATCC 9039 nitrite reductase (NAD(P)H) large subunit YP_001833082.1 2247597 R 395963 CDS YP_001833083.1 182678937 6199352 complement(2250684..2251955) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA1213 nitrate transporter; major facilitator transporter 2251955 6199352 Bind_1971 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833083.1 2250684 R 395963 CDS YP_001833084.1 182678938 6200376 complement(2252320..2253531) 1 NC_010581.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gdi:GDI0493 putative flavohemoprotein; oxidoreductase FAD-binding subunit 2253531 6200376 Bind_1972 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase FAD-binding subunit YP_001833084.1 2252320 R 395963 CDS YP_001833085.1 182678939 6199773 2253609..2254061 1 NC_010581.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: gdi:GDI0494 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2254061 6199773 Bind_1973 Beijerinckia indica subsp. indica ATCC 9039 BadM/Rrf2 family transcriptional regulator YP_001833085.1 2253609 D 395963 CDS YP_001833086.1 182678940 6200791 2254237..2259186 1 NC_010581.1 KEGG: rpd:RPD_0591 DNA helicase, putative; DNA helicase 2259186 6200791 Bind_1974 Beijerinckia indica subsp. indica ATCC 9039 DNA helicase YP_001833086.1 2254237 D 395963 CDS YP_001833087.1 182678941 6200455 complement(2259341..2259628) 1 NC_010581.1 hypothetical protein 2259628 6200455 Bind_1975 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833087.1 2259341 R 395963 CDS YP_001833088.1 182678942 6201088 complement(2259908..2260693) 1 NC_010581.1 KEGG: rsh:Rsph17029_2609 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase 2260693 6201088 Bind_1976 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001833088.1 2259908 R 395963 CDS YP_001833089.1 182678943 6200835 2260765..2261541 1 NC_010581.1 PFAM: methyltransferase small; KEGG: xau:Xaut_1375 methyltransferase small; methyltransferase small 2261541 6200835 Bind_1977 Beijerinckia indica subsp. indica ATCC 9039 methyltransferase small YP_001833089.1 2260765 D 395963 CDS YP_001833090.1 182678944 6201093 complement(2261664..2261966) 1 NC_010581.1 KEGG: bra:BRADO0368 hypothetical protein; hypothetical protein 2261966 6201093 Bind_1978 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833090.1 2261664 R 395963 CDS YP_001833091.1 182678945 6199250 2262248..2263207 1 NC_010581.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2263207 glyQ 6199250 glyQ Beijerinckia indica subsp. indica ATCC 9039 glycyl-tRNA synthetase subunit alpha YP_001833091.1 2262248 D 395963 CDS YP_001833092.1 182678946 6199187 2263350..2263853 1 NC_010581.1 KEGG: mex:Mext_4423 hypothetical protein; hypothetical protein 2263853 6199187 Bind_1980 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833092.1 2263350 D 395963 CDS YP_001833093.1 182678947 6200418 complement(2263872..2264108) 1 NC_010581.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bja:bsr5907 probable transcriptional regulator; AsnC family transcriptional regulator 2264108 6200418 Bind_1981 Beijerinckia indica subsp. indica ATCC 9039 AsnC family transcriptional regulator YP_001833093.1 2263872 R 395963 CDS YP_001833094.1 182678948 6201194 complement(2264305..2264781) 1 NC_010581.1 hypothetical protein 2264781 6201194 Bind_1982 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833094.1 2264305 R 395963 CDS YP_001833095.1 182678949 6198546 complement(2264942..2267485) 1 NC_010581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_1524 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 2267485 6198546 Bind_1983 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor hybrid histidine kinase YP_001833095.1 2264942 R 395963 CDS YP_001833096.1 182678950 6200377 2268131..2268457 1 NC_010581.1 hypothetical protein 2268457 6200377 Bind_1984 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833096.1 2268131 D 395963 CDS YP_001833097.1 182678951 6200297 2268592..2269674 1 NC_010581.1 KEGG: mex:Mext_2609 hypothetical protein; hypothetical protein 2269674 6200297 Bind_1985 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833097.1 2268592 D 395963 CDS YP_001833098.1 182678952 6200457 complement(2269851..2271167) 1 NC_010581.1 KEGG: xau:Xaut_1697 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2271167 6200457 Bind_1986 Beijerinckia indica subsp. indica ATCC 9039 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001833098.1 2269851 R 395963 CDS YP_001833099.1 182678953 6200743 complement(2271177..2272046) 1 NC_010581.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: azc:AZC_1024 acetyl-CoA carboxylase carboxyl transferase beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 2272046 6200743 Bind_1987 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001833099.1 2271177 R 395963 CDS YP_001833100.1 182678954 6198983 complement(2272110..2272943) 1 NC_010581.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2272943 trpA 6198983 trpA Beijerinckia indica subsp. indica ATCC 9039 tryptophan synthase subunit alpha YP_001833100.1 2272110 R 395963 CDS YP_001833101.1 182678955 6199061 complement(2273184..2273387) 1 NC_010581.1 hypothetical protein 2273387 6199061 Bind_1989 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833101.1 2273184 R 395963 CDS YP_001833102.1 182678956 6200757 complement(2274131..2275375) 1 NC_010581.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2275375 6200757 Bind_1990 Beijerinckia indica subsp. indica ATCC 9039 tryptophan synthase subunit beta YP_001833102.1 2274131 R 395963 CDS YP_001833103.1 182678957 6201182 complement(2275663..2276790) 1 NC_010581.1 PFAM: regulatory protein LuxR; KEGG: rle:pRL100454 putative transcriptional regulator; LuxR family transcriptional regulator 2276790 6201182 Bind_1991 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001833103.1 2275663 R 395963 CDS YP_001833104.1 182678958 6199549 complement(2277277..2278410) 1 NC_010581.1 PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B1619 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2278410 6199549 Bind_1992 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001833104.1 2277277 R 395963 CDS YP_001833105.1 182678959 6199674 complement(2278659..2279783) 1 NC_010581.1 PFAM: regulatory protein LuxR; KEGG: rpb:RPB_2794 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2279783 6199674 Bind_1993 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001833105.1 2278659 R 395963 CDS YP_001833106.1 182678960 6199175 2280317..2280748 1 NC_010581.1 PFAM: OsmC family protein; KEGG: cak:Caul_5086 OsmC family protein; OsmC family protein 2280748 6199175 Bind_1994 Beijerinckia indica subsp. indica ATCC 9039 OsmC family protein YP_001833106.1 2280317 D 395963 CDS YP_001833107.1 182678961 6200145 complement(2280846..2282564) 1 NC_010581.1 KEGG: bra:BRADO5888 hypothetical protein; hypothetical protein 2282564 6200145 Bind_1995 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833107.1 2280846 R 395963 CDS YP_001833108.1 182678962 6199589 2283058..2283780 1 NC_010581.1 PFAM: MgtC/SapB transporter; KEGG: bja:bll7766 hypothetical protein; MgtC/SapB transporter 2283780 6199589 Bind_1996 Beijerinckia indica subsp. indica ATCC 9039 MgtC/SapB transporter YP_001833108.1 2283058 D 395963 CDS YP_001833109.1 182678963 6199592 2283859..2284218 1 NC_010581.1 KEGG: gdi:GDI0596 hypothetical protein; hypothetical protein 2284218 6199592 Bind_1997 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833109.1 2283859 D 395963 CDS YP_001833110.1 182678964 6200029 2284615..2285718 1 NC_010581.1 KEGG: xau:Xaut_0561 hypothetical protein; hypothetical protein 2285718 6200029 Bind_1998 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833110.1 2284615 D 395963 CDS YP_001833111.1 182678965 6200444 2285724..2286311 1 NC_010581.1 KEGG: xau:Xaut_0560 GCN5-related N-acetyltransferase; hypothetical protein 2286311 6200444 Bind_1999 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833111.1 2285724 D 395963 CDS YP_001833112.1 182678966 6198641 complement(2286252..2286809) 1 NC_010581.1 KEGG: xau:Xaut_0559 adenylate kinase-like protein; adenylate kinase-like protein 2286809 6198641 Bind_2000 Beijerinckia indica subsp. indica ATCC 9039 adenylate kinase-like protein YP_001833112.1 2286252 R 395963 CDS YP_001833113.1 182678967 6198703 complement(2286800..2287222) 1 NC_010581.1 KEGG: cak:Caul_1163 protein of unknown function DUF437; hypothetical protein 2287222 6198703 Bind_2001 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833113.1 2286800 R 395963 CDS YP_001833114.1 182678968 6200441 complement(2287200..2288249) 1 NC_010581.1 KEGG: xau:Xaut_0558 hypothetical protein; hypothetical protein 2288249 6200441 Bind_2002 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833114.1 2287200 R 395963 CDS YP_001833115.1 182678969 6201125 complement(2288666..2289436) 1 NC_010581.1 PFAM: carbonic anhydrase; KEGG: rpb:RPB_4620 carbonic anhydrase; carbonic anhydrase 2289436 6201125 Bind_2003 Beijerinckia indica subsp. indica ATCC 9039 carbonic anhydrase YP_001833115.1 2288666 R 395963 CDS YP_001833116.1 182678970 6198414 2289707..2290771 1 NC_010581.1 KEGG: gdi:GDI2313 putative ABC-type Fe3+ transport system periplasmic component; putative ABC-type Fe3+ transport system periplasmic component 2290771 6198414 Bind_2004 Beijerinckia indica subsp. indica ATCC 9039 putative ABC-type Fe3+ transport system periplasmic component YP_001833116.1 2289707 D 395963 CDS YP_001833117.1 182678971 6201043 2290768..2291817 1 NC_010581.1 PFAM: transport system permease protein; KEGG: gdi:GDI2312 putative ABC-type Fe3+ transport system permease component; transport system permease 2291817 6201043 Bind_2005 Beijerinckia indica subsp. indica ATCC 9039 transport system permease YP_001833117.1 2290768 D 395963 CDS YP_001833118.1 182678972 6199861 2291814..2292551 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2311 putative ABC-type Fe3+ transport system ATP-binding component; ABC transporter-like protein 2292551 6199861 Bind_2006 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833118.1 2291814 D 395963 CDS YP_001833119.1 182678973 6199295 complement(2292555..2293826) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_0023 major facilitator superfamily MFS_1; major facilitator transporter 2293826 6199295 Bind_2007 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833119.1 2292555 R 395963 CDS YP_001833120.1 182678974 6199526 2295915..2297141 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_2308 major facilitator superfamily MFS_1; major facilitator transporter 2297141 6199526 Bind_2009 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833120.1 2295915 D 395963 CDS YP_001833121.1 182678975 6198708 complement(2297148..2297375) 1 NC_010581.1 KEGG: rpb:RPB_1508 hypothetical protein; hypothetical protein 2297375 6198708 Bind_2010 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833121.1 2297148 R 395963 CDS YP_001833122.1 182678976 6200708 complement(2297549..2298310) 1 NC_010581.1 KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 2298310 6200708 Bind_2011 Beijerinckia indica subsp. indica ATCC 9039 ubiquinone biosynthesis O-methyltransferase YP_001833122.1 2297549 R 395963 CDS YP_001833123.1 182678977 6199768 2298735..2299100 1 NC_010581.1 hypothetical protein 2299100 6199768 Bind_2012 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833123.1 2298735 D 395963 CDS YP_001833124.1 182678978 6200288 complement(2299166..2299402) 1 NC_010581.1 hypothetical protein 2299402 6200288 Bind_2013 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833124.1 2299166 R 395963 CDS YP_001833125.1 182678979 6199294 complement(2299528..2300190) 1 NC_010581.1 KEGG: eba:ebA3304 hypoxanthine-guanine phosphoribosyltransferase; hypothetical protein 2300190 6199294 Bind_2014 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833125.1 2299528 R 395963 CDS YP_001833126.1 182678980 6199070 2301040..2302440 1 NC_010581.1 PFAM: polysaccharide biosynthesis protein; KEGG: ppr:PBPRA2684 hypothetical protein; polysaccharide biosynthesis protein 2302440 6199070 Bind_2015 Beijerinckia indica subsp. indica ATCC 9039 polysaccharide biosynthesis protein YP_001833126.1 2301040 D 395963 CDS YP_001833127.1 182678981 6199960 2302468..2303892 1 NC_010581.1 PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_1246 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2303892 6199960 Bind_2016 Beijerinckia indica subsp. indica ATCC 9039 FAD linked oxidase domain-containing protein YP_001833127.1 2302468 D 395963 CDS YP_001833128.1 182678982 6200596 complement(2303940..2305247) 1 NC_010581.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2291 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2305247 6200596 Bind_2017 Beijerinckia indica subsp. indica ATCC 9039 cyclopropane-fatty-acyl-phospholipid synthase YP_001833128.1 2303940 R 395963 CDS YP_001833129.1 182678983 6199404 2305682..2306062 1 NC_010581.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: pol:Bpro_0509 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2306062 6199404 Bind_2018 Beijerinckia indica subsp. indica ATCC 9039 4-oxalocrotonate tautomerase YP_001833129.1 2305682 D 395963 CDS YP_001833130.1 182678984 6199931 complement(2306067..2307374) 1 NC_010581.1 KEGG: bxe:Bxe_C0750 Mn2+/Fe2+ transporter, NRAMP family; Mn2+/Fe2+ transporter 2307374 6199931 Bind_2019 Beijerinckia indica subsp. indica ATCC 9039 Mn2+/Fe2+ transporter YP_001833130.1 2306067 R 395963 CDS YP_001833131.1 182678985 6201344 complement(2307626..2309266) 1 NC_010581.1 KEGG: bte:BTH_II1873 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; levanase 2309266 6201344 Bind_2020 Beijerinckia indica subsp. indica ATCC 9039 levanase YP_001833131.1 2307626 R 395963 CDS YP_001833132.1 182678986 6201278 2309632..2311236 1 NC_010581.1 PFAM: glycoside hydrolase family 68; KEGG: bch:Bcen2424_4270 levansucrase; levansucrase 2311236 6201278 Bind_2021 Beijerinckia indica subsp. indica ATCC 9039 levansucrase YP_001833132.1 2309632 D 395963 CDS YP_001833133.1 182678987 6198807 complement(2311418..2312176) 1 NC_010581.1 PFAM: protein of unknown function DUF159; KEGG: rpd:RPD_1245 protein of unknown function DUF159; hypothetical protein 2312176 6198807 Bind_2022 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833133.1 2311418 R 395963 CDS YP_001833134.1 182678988 6199329 2312260..2313240 1 NC_010581.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 2313240 6199329 Bind_2023 Beijerinckia indica subsp. indica ATCC 9039 Sua5/YciO/YrdC/YwlC family protein YP_001833134.1 2312260 D 395963 CDS YP_001833135.1 182678989 6200474 complement(2313243..2314820) 1 NC_010581.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3796 putative outer membrane protein; RND efflux system outer membrane lipoprotein 2314820 6200474 Bind_2024 Beijerinckia indica subsp. indica ATCC 9039 RND efflux system outer membrane lipoprotein YP_001833135.1 2313243 R 395963 CDS YP_001833136.1 182678990 6198793 complement(2314934..2316514) 1 NC_010581.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_1723 multidrug resistance protein B; EmrB/QacA family drug resistance transporter 2316514 6198793 Bind_2025 Beijerinckia indica subsp. indica ATCC 9039 EmrB/QacA family drug resistance transporter YP_001833136.1 2314934 R 395963 CDS YP_001833137.1 182678991 6200205 complement(2316511..2317716) 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1724 multidrug resistance protein A; secretion protein HlyD family protein 2317716 6200205 Bind_2026 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001833137.1 2316511 R 395963 CDS YP_001833138.1 182678992 6201089 2317955..2318581 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mca:MCA2256 transcriptional regulator, TetR family; TetR family transcriptional regulator 2318581 6201089 Bind_2027 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833138.1 2317955 D 395963 CDS YP_001833139.1 182678993 6199942 2318622..2319494 1 NC_010581.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: xau:Xaut_2373 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 2319494 6199942 Bind_2028 Beijerinckia indica subsp. indica ATCC 9039 phage SPO1 DNA polymerase-like protein YP_001833139.1 2318622 D 395963 CDS YP_001833140.1 182678994 6199598 complement(2319506..2320474) 1 NC_010581.1 KEGG: xau:Xaut_3321 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2320474 6199598 Bind_2029 Beijerinckia indica subsp. indica ATCC 9039 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001833140.1 2319506 R 395963 CDS YP_001833141.1 182678995 6200667 2320512..2320763 1 NC_010581.1 hypothetical protein 2320763 6200667 Bind_2030 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833141.1 2320512 D 395963 CDS YP_001833142.1 182678996 6199863 2320991..2323540 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_2607 TonB-dependent siderophore receptor, putative; TonB-dependent receptor 2323540 6199863 Bind_2031 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833142.1 2320991 D 395963 CDS YP_001833143.1 182678997 6198778 2323589..2324626 1 NC_010581.1 KEGG: bch:Bcen2424_4026 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 2324626 6198778 Bind_2032 Beijerinckia indica subsp. indica ATCC 9039 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_001833143.1 2323589 D 395963 CDS YP_001833144.1 182678998 6200408 complement(2324637..2327030) 1 NC_010581.1 KEGG: azc:AZC_3122 PAS protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 2327030 6200408 Bind_2033 Beijerinckia indica subsp. indica ATCC 9039 multi-sensor signal transduction histidine kinase YP_001833144.1 2324637 R 395963 CDS YP_001833145.1 182678999 6200125 2328055..2328858 1 NC_010581.1 PFAM: regulatory protein LysR; TOBE domain protein; KEGG: rpd:RPD_2476 ModE molybdate transport repressor domain; ModE family transcriptional regulator 2328858 6200125 Bind_2034 Beijerinckia indica subsp. indica ATCC 9039 ModE family transcriptional regulator YP_001833145.1 2328055 D 395963 CDS YP_001833146.1 182679000 6201119 2329056..2329217 1 NC_010581.1 hypothetical protein 2329217 6201119 Bind_2035 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833146.1 2329056 D 395963 CDS YP_001833147.1 182679001 6200105 2329205..2329573 1 NC_010581.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 2329573 rpsM 6200105 rpsM Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S13 YP_001833147.1 2329205 D 395963 CDS YP_001833148.1 182679002 6199748 2329766..2330155 1 NC_010581.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 2330155 6199748 Bind_2037 Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S11 YP_001833148.1 2329766 D 395963 CDS YP_001833149.1 182679003 6199839 2330121..2330345 1 NC_010581.1 hypothetical protein 2330345 6199839 Bind_2038 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833149.1 2330121 D 395963 CDS YP_001833150.1 182679004 6200215 2330415..2331431 1 NC_010581.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2331431 6200215 Bind_2039 Beijerinckia indica subsp. indica ATCC 9039 DNA-directed RNA polymerase subunit alpha YP_001833150.1 2330415 D 395963 CDS YP_001833151.1 182679005 6201040 2331533..2331955 1 NC_010581.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 2331955 rplQ 6201040 rplQ Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L17 YP_001833151.1 2331533 D 395963 CDS YP_001833152.1 182679006 6198883 2332174..2333616 1 NC_010581.1 KEGG: xau:Xaut_4771 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2333616 6198883 Bind_2041 Beijerinckia indica subsp. indica ATCC 9039 protease Do YP_001833152.1 2332174 D 395963 CDS YP_001833153.1 182679007 6199113 2333671..2334978 1 NC_010581.1 PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mlo:mlr0329 recombination factor protein RarA; ATPase central domain-containing protein 2334978 6199113 Bind_2042 Beijerinckia indica subsp. indica ATCC 9039 ATPase central domain-containing protein YP_001833153.1 2333671 D 395963 CDS YP_001833154.1 182679008 6198893 2335126..2336022 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bmn:BMA10247_0277 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein 2336022 6198893 Bind_2043 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001833154.1 2335126 D 395963 CDS YP_001833155.1 182679009 6199349 complement(2336169..2337014) 1 NC_010581.1 PFAM: fatty acid hydroxylase; KEGG: afm:AFUA_6G00740 conserved hypothetical protein; fatty acid hydroxylase 2337014 6199349 Bind_2044 Beijerinckia indica subsp. indica ATCC 9039 fatty acid hydroxylase YP_001833155.1 2336169 R 395963 CDS YP_001833156.1 182679010 6200362 2337296..2337994 1 NC_010581.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 2337994 pyrE 6200362 pyrE Beijerinckia indica subsp. indica ATCC 9039 orotate phosphoribosyltransferase YP_001833156.1 2337296 D 395963 CDS YP_001833157.1 182679011 6199707 2338022..2338681 1 NC_010581.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rpc:RPC_3189 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 2338681 6199707 Bind_2046 Beijerinckia indica subsp. indica ATCC 9039 Crp/FNR family transcriptional regulator YP_001833157.1 2338022 D 395963 CDS YP_001833158.1 182679012 6201484 2338737..2339012 1 NC_010581.1 KEGG: gdi:GDI3488 hypothetical protein; hypothetical protein 2339012 6201484 Bind_2047 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833158.1 2338737 D 395963 CDS YP_001833159.1 182679013 6200078 complement(2339212..2340873) 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: sak:SAK_1253 capsular polysaccharide biosynthesis protein CpsJ; glycosyl transferase family protein 2340873 6200078 Bind_2048 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001833159.1 2339212 R 395963 CDS YP_001833160.1 182679014 6198601 complement(2340861..2341187) 1 NC_010581.1 hypothetical protein 2341187 6198601 Bind_2049 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833160.1 2340861 R 395963 CDS YP_001833161.1 182679015 6200084 complement(2341478..2342926) 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_0645 pyridine nucleotide-disulfide oxidoreductase family; pyridine nucleotide-disulfide oxidoreductase family protein 2342926 6200084 Bind_2050 Beijerinckia indica subsp. indica ATCC 9039 pyridine nucleotide-disulfide oxidoreductase family protein YP_001833161.1 2341478 R 395963 CDS YP_001833162.1 182679016 6200973 complement(2343046..2344224) 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: xau:Xaut_1213 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 2344224 6200973 Bind_2051 Beijerinckia indica subsp. indica ATCC 9039 alkanesulfonate monooxygenase YP_001833162.1 2343046 R 395963 CDS YP_001833163.1 182679017 6199233 complement(2344246..2345637) 1 NC_010581.1 KEGG: bbt:BBta_3195 putative luciferase-like protein, putative alkanesulfonate monooxygenase; putative luciferase-like protein alkanesulfonate monooxygenase 2345637 6199233 Bind_2052 Beijerinckia indica subsp. indica ATCC 9039 putative luciferase-like protein alkanesulfonate monooxygenase YP_001833163.1 2344246 R 395963 CDS YP_001833164.1 182679018 6198898 complement(2345649..2346860) 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2915 hypothetical protein; acyl-CoA dehydrogenase type 2 2346860 6198898 Bind_2053 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001833164.1 2345649 R 395963 CDS YP_001833165.1 182679019 6200776 complement(2346915..2348162) 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase type 2 2348162 6200776 Bind_2054 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001833165.1 2346915 R 395963 CDS YP_001833166.1 182679020 6198745 2348471..2348947 1 NC_010581.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 regulatory protein AsnC/Lrp family; AsnC family transcriptional regulator 2348947 6198745 Bind_2055 Beijerinckia indica subsp. indica ATCC 9039 AsnC family transcriptional regulator YP_001833166.1 2348471 D 395963 CDS YP_001833167.1 182679021 6200086 2349272..2349514 1 NC_010581.1 KEGG: azc:AZC_0167 hypothetical protein; hypothetical protein 2349514 6200086 Bind_2056 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833167.1 2349272 D 395963 CDS YP_001833168.1 182679022 6200070 complement(2349572..2350414) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_2775 ABC transporter related; ABC transporter-like protein 2350414 6200070 Bind_2057 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833168.1 2349572 R 395963 CDS YP_001833169.1 182679023 6201200 complement(2350408..2351454) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2351454 6201200 Bind_2058 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833169.1 2350408 R 395963 CDS YP_001833170.1 182679024 6200059 2352818..2353114 1 NC_010581.1 hypothetical protein 2353114 6200059 Bind_2060 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833170.1 2352818 D 395963 CDS YP_001833171.1 182679025 6199941 2353193..2355583 1 NC_010581.1 KEGG: bbt:BBta_2963 putative membrane transporter; putative membrane transporter 2355583 6199941 Bind_2061 Beijerinckia indica subsp. indica ATCC 9039 putative membrane transporter YP_001833171.1 2353193 D 395963 CDS YP_001833172.1 182679026 6200660 complement(2355638..2356153) 1 NC_010581.1 KEGG: rpa:RPA4573 hypothetical protein; hypothetical protein 2356153 6200660 Bind_2062 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833172.1 2355638 R 395963 CDS YP_001833173.1 182679027 6201038 complement(2356460..2358811) 1 NC_010581.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 2358811 6201038 Bind_2063 Beijerinckia indica subsp. indica ATCC 9039 malic enzyme YP_001833173.1 2356460 R 395963 CDS YP_001833174.1 182679028 6201158 2359162..2360298 1 NC_010581.1 KEGG: xau:Xaut_0236 hypothetical protein; hypothetical protein 2360298 6201158 Bind_2064 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833174.1 2359162 D 395963 CDS YP_001833175.1 182679029 6201295 complement(2360372..2360944) 1 NC_010581.1 PFAM: DinB family protein; KEGG: oan:Oant_2595 DinB family protein; DinB family protein 2360944 6201295 Bind_2065 Beijerinckia indica subsp. indica ATCC 9039 DinB family protein YP_001833175.1 2360372 R 395963 CDS YP_001833176.1 182679030 6200785 2361029..2361895 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_0951 transcriptional regulator, LysR family; LysR family transcriptional regulator 2361895 6200785 Bind_2066 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833176.1 2361029 D 395963 CDS YP_001833177.1 182679031 6201366 complement(2361952..2364741) 1 NC_010581.1 KEGG: bja:bll4696 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 2364741 6201366 Bind_2067 Beijerinckia indica subsp. indica ATCC 9039 DNA gyrase subunit A YP_001833177.1 2361952 R 395963 CDS YP_001833178.1 182679032 6198463 2364862..2365938 1 NC_010581.1 KEGG: cvi:CV_0172 poly (3-hydroxybutyrate) depolymerase; poly (3-hydroxybutyrate) depolymerase 2365938 6198463 Bind_2068 Beijerinckia indica subsp. indica ATCC 9039 poly (3-hydroxybutyrate) depolymerase YP_001833178.1 2364862 D 395963 CDS YP_001833179.1 182679033 6200415 complement(2366006..2366548) 1 NC_010581.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mes:Meso_1397 single-strand binding protein; single-strand binding protein 2366548 6200415 Bind_2069 Beijerinckia indica subsp. indica ATCC 9039 single-strand binding protein YP_001833179.1 2366006 R 395963 CDS YP_001833180.1 182679034 6199772 complement(2366694..2368439) 1 NC_010581.1 PFAM: Heparinase II/III family protein; KEGG: xau:Xaut_0039 heparinase II/III family protein; heparinase II/III family protein 2368439 6199772 Bind_2070 Beijerinckia indica subsp. indica ATCC 9039 heparinase II/III family protein YP_001833180.1 2366694 R 395963 CDS YP_001833181.1 182679035 6198354 complement(2368584..2369975) 1 NC_010581.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: xau:Xaut_0038 sun protein; sun protein 2369975 6198354 Bind_2071 Beijerinckia indica subsp. indica ATCC 9039 sun protein YP_001833181.1 2368584 R 395963 CDS YP_001833182.1 182679036 6200347 2370147..2370374 1 NC_010581.1 PFAM: protein of unknown function DUF1674; KEGG: xau:Xaut_1806 protein of unknown function DUF1674; hypothetical protein 2370374 6200347 Bind_2072 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833182.1 2370147 D 395963 CDS YP_001833183.1 182679037 6199241 2370572..2372821 1 NC_010581.1 PFAM: TonB-dependent receptor plug; KEGG: sat:SYN_01058 TonB dependent receptor family; TonB-dependent receptor plug 2372821 6199241 Bind_2073 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor plug YP_001833183.1 2370572 D 395963 CDS YP_001833184.1 182679038 6198501 2372882..2373904 1 NC_010581.1 PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein 2373904 6198501 Bind_2074 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein YP_001833184.1 2372882 D 395963 CDS YP_001833185.1 182679039 6201113 2374049..2374780 1 NC_010581.1 KEGG: sat:SYN_00840 hypothetical cytosolic protein; hypothetical protein 2374780 6201113 Bind_2075 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833185.1 2374049 D 395963 CDS YP_001833186.1 182679040 6200950 2375021..2376433 1 NC_010581.1 KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein; O-antigen and teichoic acid-like protein export membrane protein 2376433 6200950 Bind_2076 Beijerinckia indica subsp. indica ATCC 9039 O-antigen and teichoic acid-like protein export membrane protein YP_001833186.1 2375021 D 395963 CDS YP_001833187.1 182679041 6201106 2376497..2376907 1 NC_010581.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rle:RL1132 putative transmembrane protein; hypothetical protein 2376907 6201106 Bind_2077 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833187.1 2376497 D 395963 CDS YP_001833188.1 182679042 6200451 2376904..2377338 1 NC_010581.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sme:SMa1052 hypothetical protein; hypothetical protein 2377338 6200451 Bind_2078 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833188.1 2376904 D 395963 CDS YP_001833189.1 182679043 6200560 2377499..2378248 1 NC_010581.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: smd:Smed_4324 GntR domain protein; regulatory protein GntR HTH 2378248 6200560 Bind_2079 Beijerinckia indica subsp. indica ATCC 9039 regulatory protein GntR HTH YP_001833189.1 2377499 D 395963 CDS YP_001833190.1 182679044 6200546 2378356..2379342 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: acr:Acry_2399 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2379342 6200546 Bind_2080 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001833190.1 2378356 D 395963 CDS YP_001833191.1 182679045 6199469 2379472..2380785 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4374 major facilitator family transporter; major facilitator transporter 2380785 6199469 Bind_2081 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833191.1 2379472 D 395963 CDS YP_001833192.1 182679046 6200881 complement(2380854..2381516) 1 NC_010581.1 PFAM: class II aldolase/adducin family protein; KEGG: xau:Xaut_1030 class II aldolase/adducin family protein; putative aldolase 2381516 6200881 Bind_2082 Beijerinckia indica subsp. indica ATCC 9039 putative aldolase YP_001833192.1 2380854 R 395963 CDS YP_001833193.1 182679047 6199857 complement(2381550..2382569) 1 NC_010581.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xau:Xaut_1029 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 2382569 6199857 Bind_2083 Beijerinckia indica subsp. indica ATCC 9039 LacI family transcriptional regulator YP_001833193.1 2381550 R 395963 CDS YP_001833194.1 182679048 6201297 2382856..2384169 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1028 major facilitator superfamily MFS_1; major facilitator transporter 2384169 6201297 Bind_2084 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833194.1 2382856 D 395963 CDS YP_001833195.1 182679049 6199841 2384261..2385187 1 NC_010581.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bbt:BBta_2897 putative dehydrogenase, NAD(P)-binding domain; 3-hydroxyisobutyrate dehydrogenase 2385187 6199841 Bind_2085 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxyisobutyrate dehydrogenase YP_001833195.1 2384261 D 395963 CDS YP_001833196.1 182679050 6201293 2385323..2386132 1 NC_010581.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_1026 hydroxypyruvate isomerase; hydroxypyruvate isomerase 2386132 6201293 Bind_2086 Beijerinckia indica subsp. indica ATCC 9039 hydroxypyruvate isomerase YP_001833196.1 2385323 D 395963 CDS YP_001833197.1 182679051 6200509 2386129..2387406 1 NC_010581.1 PFAM: type III effector Hrp-dependent outers; KEGG: bja:blr2930 hypothetical protein; Hrp-dependent type III effector protein 2387406 6200509 Bind_2087 Beijerinckia indica subsp. indica ATCC 9039 Hrp-dependent type III effector protein YP_001833197.1 2386129 D 395963 CDS YP_001833198.1 182679052 6199493 complement(2387488..2388381) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: gvi:gll1281 hypothetical protein; alpha/beta hydrolase fold protein 2388381 6199493 Bind_2088 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001833198.1 2387488 R 395963 CDS YP_001833199.1 182679053 6198664 2388506..2389429 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4867 transcriptional regulator, LysR family; LysR family transcriptional regulator 2389429 6198664 Bind_2089 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833199.1 2388506 D 395963 CDS YP_001833200.1 182679054 6200370 2389575..2390288 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb20210 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2390288 6200370 Bind_2090 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833200.1 2389575 D 395963 CDS YP_001833201.1 182679055 6200518 2390353..2391441 1 NC_010581.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ret:RHE_PF00539 probable dioxygenase protein; 2-nitropropane dioxygenase 2391441 6200518 Bind_2091 Beijerinckia indica subsp. indica ATCC 9039 2-nitropropane dioxygenase YP_001833201.1 2390353 D 395963 CDS YP_001833202.1 182679056 6200226 2392257..2394269 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0454 TonB-dependent outer membrane receptor for cobalamin and Fe transport; TonB-dependent receptor 2394269 6200226 Bind_2092 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833202.1 2392257 D 395963 CDS YP_001833203.1 182679057 6199153 2394280..2394930 1 NC_010581.1 KEGG: fre:Franean1_3545 hypothetical protein; hypothetical protein 2394930 6199153 Bind_2093 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833203.1 2394280 D 395963 CDS YP_001833204.1 182679058 6200557 2394965..2395507 1 NC_010581.1 KEGG: ret:RHE_CH02620 hypothetical protein; hypothetical protein 2395507 6200557 Bind_2094 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833204.1 2394965 D 395963 CDS YP_001833205.1 182679059 6199911 complement(2395706..2396134) 1 NC_010581.1 PFAM: protein of unknown function DUF336; KEGG: bbt:BBta_5732 hypothetical protein; hypothetical protein 2396134 6199911 Bind_2095 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833205.1 2395706 R 395963 CDS YP_001833206.1 182679060 6200923 2396374..2396895 1 NC_010581.1 KEGG: gdi:GDI0683 hypothetical protein; hypothetical protein 2396895 6200923 Bind_2096 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833206.1 2396374 D 395963 CDS YP_001833207.1 182679061 6200902 complement(2396921..2398042) 1 NC_010581.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sme:SMa2355 DNA polymerase IV; DNA-directed DNA polymerase 2398042 6200902 Bind_2097 Beijerinckia indica subsp. indica ATCC 9039 DNA-directed DNA polymerase YP_001833207.1 2396921 R 395963 CDS YP_001833208.1 182679062 6199375 complement(2398099..2399865) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: cak:Caul_2971 poly-beta-hydroxybutyrate polymerase domain protein; poly-beta-hydroxybutyrate polymerase domain-containing protein 2399865 6199375 Bind_2098 Beijerinckia indica subsp. indica ATCC 9039 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001833208.1 2398099 R 395963 CDS YP_001833209.1 182679063 6200336 complement(2399849..2400964) 1 NC_010581.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: xau:Xaut_0368 PHB de-polymerase domain protein; polyhydroxyalkanoate depolymerase 2400964 6200336 Bind_2099 Beijerinckia indica subsp. indica ATCC 9039 polyhydroxyalkanoate depolymerase YP_001833209.1 2399849 R 395963 CDS YP_001833210.1 182679064 6200315 2402625..2403905 1 NC_010581.1 KEGG: rpe:RPE_0575 hypothetical protein; siderophore synthetase component-like protein 2403905 6200315 Bind_2101 Beijerinckia indica subsp. indica ATCC 9039 siderophore synthetase component-like protein YP_001833210.1 2402625 D 395963 CDS YP_001833211.1 182679065 6199615 2403933..2404817 1 NC_010581.1 PFAM: protein of unknown function LppY and LpqO; KEGG: aba:Acid345_3442 protein of unknown function LppY and LpqO; hypothetical protein 2404817 6199615 Bind_2102 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833211.1 2403933 D 395963 CDS YP_001833212.1 182679066 6200272 complement(2404881..2406293) 1 NC_010581.1 KEGG: rle:RL4555 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 2406293 6200272 Bind_2103 Beijerinckia indica subsp. indica ATCC 9039 3-isopropylmalate dehydratase large subunit YP_001833212.1 2404881 R 395963 CDS YP_001833213.1 182679067 6200683 complement(2406268..2406486) 1 NC_010581.1 hypothetical protein 2406486 6200683 Bind_2104 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833213.1 2406268 R 395963 CDS YP_001833214.1 182679068 6199529 2406664..2407071 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_5680 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 2407071 6199529 Bind_2105 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001833214.1 2406664 D 395963 CDS YP_001833215.1 182679069 6199655 complement(2407077..2407433) 1 NC_010581.1 KEGG: cak:Caul_3766 hypothetical protein; hypothetical protein 2407433 6199655 Bind_2106 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833215.1 2407077 R 395963 CDS YP_001833216.1 182679070 6201857 complement(2407586..2408032) 1 NC_010581.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2408032 rplS 6201857 rplS Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L19 YP_001833216.1 2407586 R 395963 CDS YP_001833217.1 182679071 6198497 2408315..2409649 1 NC_010581.1 KEGG: mex:Mext_1623 glycosyl transferase group 1; group 1 glycosyl transferase 2409649 6198497 Bind_2108 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001833217.1 2408315 D 395963 CDS YP_001833218.1 182679072 6199970 2409694..2410353 1 NC_010581.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: azc:AZC_4444 translation initiation factor 3; translation initiation factor IF-3 2410353 6199970 Bind_2109 Beijerinckia indica subsp. indica ATCC 9039 translation initiation factor IF-3 YP_001833218.1 2409694 D 395963 CDS YP_001833219.1 182679073 6200558 2410513..2410836 1 NC_010581.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mes:Meso_3582 thioredoxin; thioredoxin 2410836 6200558 Bind_2110 Beijerinckia indica subsp. indica ATCC 9039 thioredoxin YP_001833219.1 2410513 D 395963 CDS YP_001833220.1 182679074 6200594 complement(2410920..2412191) 1 NC_010581.1 KEGG: psb:Psyr_3318 hypothetical protein; hypothetical protein 2412191 6200594 Bind_2111 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833220.1 2410920 R 395963 CDS YP_001833221.1 182679075 6198771 complement(2412333..2413451) 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1810 hypothetical protein; secretion protein HlyD family protein 2413451 6198771 Bind_2112 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001833221.1 2412333 R 395963 CDS YP_001833222.1 182679076 6201121 complement(2413453..2414175) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eli:ELI_11040 ABC transporter, ATP-binding protein; ABC transporter-like protein 2414175 6201121 Bind_2113 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833222.1 2413453 R 395963 CDS YP_001833223.1 182679077 6200893 complement(2414181..2415323) 1 NC_010581.1 PFAM: protein of unknown function DUF214; KEGG: mca:MCA1808 ABC-transporter permease protein, putative; hypothetical protein 2415323 6200893 Bind_2114 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833223.1 2414181 R 395963 CDS YP_001833224.1 182679078 6200995 2415470..2416111 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR; TetR family transcriptional regulator 2416111 6200995 Bind_2115 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833224.1 2415470 D 395963 CDS YP_001833225.1 182679079 6201007 2416150..2417043 1 NC_010581.1 PFAM: Pirin domain protein; KEGG: cak:Caul_0818 pirin domain protein; pirin domain-containing protein 2417043 6201007 Bind_2116 Beijerinckia indica subsp. indica ATCC 9039 pirin domain-containing protein YP_001833225.1 2416150 D 395963 CDS YP_001833226.1 182679080 6200812 complement(2417200..2417655) 1 NC_010581.1 hypothetical protein 2417655 6200812 Bind_2117 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833226.1 2417200 R 395963 CDS YP_001833227.1 182679081 6201042 complement(2417681..2418781) 1 NC_010581.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pde:Pden_4239 methylated-DNA--protein-cysteine methyltransferase; AraC family transcriptional regulator 2418781 6201042 Bind_2118 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833227.1 2417681 R 395963 CDS YP_001833228.1 182679082 6199875 2419073..2420296 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A0872 putative transport transmembrane protein; major facilitator transporter 2420296 6199875 Bind_2119 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833228.1 2419073 D 395963 CDS YP_001833229.1 182679083 6200456 2420329..2420853 1 NC_010581.1 PFAM: protein of unknown function DUF336; KEGG: gox:GOX0922 hypothetical protein; hypothetical protein 2420853 6200456 Bind_2120 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833229.1 2420329 D 395963 CDS YP_001833230.1 182679084 6200762 2420883..2422022 1 NC_010581.1 KEGG: gdi:GDI0861 putative major royal jelly-like protein; putative major royal jelly-like protein 2422022 6200762 Bind_2121 Beijerinckia indica subsp. indica ATCC 9039 putative major royal jelly-like protein YP_001833230.1 2420883 D 395963 CDS YP_001833231.1 182679085 6198551 complement(2422571..2422702) 1 NC_010581.1 hypothetical protein 2422702 6198551 Bind_2122 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833231.1 2422571 R 395963 CDS YP_001833232.1 182679086 6200319 complement(2422810..2423331) 1 NC_010581.1 KEGG: xac:XAC2169 methyl-accepting chemotaxis protein; hypothetical protein 2423331 6200319 Bind_2123 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833232.1 2422810 R 395963 CDS YP_001833233.1 182679087 6200275 complement(2423505..2424557) 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: gur:Gura_0699 acyltransferase 3; acyltransferase 3 2424557 6200275 Bind_2124 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001833233.1 2423505 R 395963 CDS YP_001833234.1 182679088 6199661 complement(2424726..2425538) 1 NC_010581.1 KEGG: gdi:GDI0612 putative 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase 2425538 6199661 Bind_2125 Beijerinckia indica subsp. indica ATCC 9039 3-dehydroquinate dehydratase YP_001833234.1 2424726 R 395963 CDS YP_001833235.1 182679089 6200142 complement(2425664..2428129) 1 NC_010581.1 KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 2428129 6200142 Bind_2126 Beijerinckia indica subsp. indica ATCC 9039 glycyl-tRNA synthetase subunit beta YP_001833235.1 2425664 R 395963 CDS YP_001833236.1 182679090 6200072 complement(2428270..2429604) 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_2087 putative MFS dicarboxylate transporter; major facilitator transporter 2429604 6200072 Bind_2127 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833236.1 2428270 R 395963 CDS YP_001833237.1 182679091 6199355 2430016..2430465 1 NC_010581.1 hypothetical protein 2430465 6199355 Bind_2128 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833237.1 2430016 D 395963 CDS YP_001833238.1 182679092 6198871 complement(2430730..2431119) 1 NC_010581.1 KEGG: atc:AGR_L_1520 hypothetical protein; hypothetical protein 2431119 6198871 Bind_2129 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833238.1 2430730 R 395963 CDS YP_001833239.1 182679093 6201685 2431601..2432002 1 NC_010581.1 hypothetical protein 2432002 6201685 Bind_2130 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833239.1 2431601 D 395963 CDS YP_001833240.1 182679094 6199343 complement(2432299..2434545) 1 NC_010581.1 KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; hypothetical protein 2434545 6199343 Bind_2131 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833240.1 2432299 R 395963 CDS YP_001833241.1 182679095 6200021 complement(2434693..2437071) 1 NC_010581.1 KEGG: dre:799000 hypothetical protein LOC799000; hypothetical protein 2437071 6200021 Bind_2132 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833241.1 2434693 R 395963 CDS YP_001833242.1 182679096 6199814 complement(2437306..2437590) 1 NC_010581.1 KEGG: kra:Krad_4676 hypothetical protein; hypothetical protein 2437590 6199814 Bind_2133 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833242.1 2437306 R 395963 CDS YP_001833243.1 182679097 6200443 complement(2438221..2438394) 1 NC_010581.1 hypothetical protein 2438394 6200443 Bind_2134 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833243.1 2438221 R 395963 CDS YP_001833244.1 182679098 6199852 complement(2439108..2439563) 1 NC_010581.1 KEGG: sme:SMc01448 hypothetical protein; hypothetical protein 2439563 6199852 Bind_2135 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833244.1 2439108 R 395963 CDS YP_001833245.1 182679099 6201245 complement(2439706..2440461) 1 NC_010581.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: swi:Swit_2241 arsenate resistance ArsH; arsenical resistance protein ArsH 2440461 6201245 Bind_2136 Beijerinckia indica subsp. indica ATCC 9039 arsenical resistance protein ArsH YP_001833245.1 2439706 R 395963 CDS YP_001833246.1 182679100 6199596 complement(2440469..2441551) 1 NC_010581.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_3198 arsenical-resistance protein; arsenical-resistance protein 2441551 6199596 Bind_2137 Beijerinckia indica subsp. indica ATCC 9039 arsenical-resistance protein YP_001833246.1 2440469 R 395963 CDS YP_001833247.1 182679101 6201030 complement(2441615..2442007) 1 NC_010581.1 PFAM: arsenate reductase and related; KEGG: smd:Smed_5055 arsenate reductase; arsenate reductase-like protein 2442007 6201030 Bind_2138 Beijerinckia indica subsp. indica ATCC 9039 arsenate reductase-like protein YP_001833247.1 2441615 R 395963 CDS YP_001833248.1 182679102 6199824 complement(2442007..2442546) 1 NC_010581.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_0618 protein tyrosine phosphatase; protein tyrosine phosphatase 2442546 6199824 Bind_2139 Beijerinckia indica subsp. indica ATCC 9039 protein tyrosine phosphatase YP_001833248.1 2442007 R 395963 CDS YP_001833249.1 182679103 6201086 complement(2442543..2442896) 1 NC_010581.1 SMART: regulatory protein ArsR; KEGG: rpc:RPC_0619 putative transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2442896 6201086 Bind_2140 Beijerinckia indica subsp. indica ATCC 9039 ArsR family transcriptional regulator YP_001833249.1 2442543 R 395963 CDS YP_001833250.1 182679104 6200241 2443078..2445597 1 NC_010581.1 KEGG: rpc:RPC_2461 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 2445597 6200241 Bind_2141 Beijerinckia indica subsp. indica ATCC 9039 P-type HAD superfamily ATPase YP_001833250.1 2443078 D 395963 CDS YP_001833251.1 182679105 6199384 complement(2445605..2446300) 1 NC_010581.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_5570 putative membrane protein of unknown function; hypothetical protein 2446300 6199384 Bind_2142 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833251.1 2445605 R 395963 CDS YP_001833252.1 182679106 6199777 complement(2446549..2447319) 1 NC_010581.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mlo:mll2704 probable acid phosphatase; PA-phosphatase-like protein 2447319 6199777 Bind_2143 Beijerinckia indica subsp. indica ATCC 9039 PA-phosphatase-like protein YP_001833252.1 2446549 R 395963 CDS YP_001833253.1 182679107 6198884 complement(2447456..2448346) 1 NC_010581.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpa:RPA0156 TonB like protein; TonB family protein 2448346 6198884 Bind_2144 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001833253.1 2447456 R 395963 CDS YP_001833254.1 182679108 6201848 complement(2448343..2448846) 1 NC_010581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gbe:GbCGDNIH1_1104 TolR protein; biopolymer transport protein ExbD/TolR 2448846 6201848 Bind_2145 Beijerinckia indica subsp. indica ATCC 9039 biopolymer transport protein ExbD/TolR YP_001833254.1 2448343 R 395963 CDS YP_001833255.1 182679109 6201307 complement(2448846..2449481) 1 NC_010581.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA0154 possible MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel 2449481 6201307 Bind_2146 Beijerinckia indica subsp. indica ATCC 9039 MotA/TolQ/ExbB proton channel YP_001833255.1 2448846 R 395963 CDS YP_001833256.1 182679110 6201140 complement(2449641..2451923) 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: zmo:ZMO1807 TonB-dependent receptor; TonB-dependent receptor 2451923 6201140 Bind_2147 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833256.1 2449641 R 395963 CDS YP_001833257.1 182679111 6199632 complement(2452171..2453202) 1 NC_010581.1 PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_1552 protein of unknown function DUF81; hypothetical protein 2453202 6199632 Bind_2148 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833257.1 2452171 R 395963 CDS YP_001833258.1 182679112 6200551 complement(2453703..2454869) 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: bxe:Bxe_B0486 hypothetical protein; acyltransferase 3 2454869 6200551 Bind_2149 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001833258.1 2453703 R 395963 CDS YP_001833259.1 182679113 6201292 2455223..2455744 1 NC_010581.1 hypothetical protein 2455744 6201292 Bind_2150 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833259.1 2455223 D 395963 CDS YP_001833260.1 182679114 6199271 2455824..2457083 1 NC_010581.1 PFAM: outer membrane efflux protein; KEGG: gdi:GDI1515 putative type I secretion outer membrane protein, TolC; outer membrane efflux protein 2457083 6199271 Bind_2151 Beijerinckia indica subsp. indica ATCC 9039 outer membrane efflux protein YP_001833260.1 2455824 D 395963 CDS YP_001833261.1 182679115 6199788 2457083..2458294 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1514 putative resistence protein; RND family efflux transporter MFP subunit 2458294 6199788 Bind_2152 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833261.1 2457083 D 395963 CDS YP_001833262.1 182679116 6200764 2458296..2461355 1 NC_010581.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI1513 putative heavy-metal ion transporter; CzcA family heavy metal efflux protein 2461355 6200764 Bind_2153 Beijerinckia indica subsp. indica ATCC 9039 CzcA family heavy metal efflux protein YP_001833262.1 2458296 D 395963 CDS YP_001833263.1 182679117 6200325 2461352..2462008 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1512 putative two component response regulator; two component transcriptional regulator 2462008 6200325 Bind_2154 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001833263.1 2461352 D 395963 CDS YP_001833264.1 182679118 6199341 2462014..2463363 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1511 putative sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2463363 6199341 Bind_2155 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833264.1 2462014 D 395963 CDS YP_001833265.1 182679119 6199670 2463534..2464970 1 NC_010581.1 PFAM: Carbohydrate-selective porin OprB; KEGG: zmo:ZMO0064 carbohydrate-selective porin; carbohydrate-selective porin OprB 2464970 6199670 Bind_2156 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate-selective porin OprB YP_001833265.1 2463534 D 395963 CDS YP_001833266.1 182679120 6200899 complement(2465024..2466106) 1 NC_010581.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2466106 pheS 6200899 pheS Beijerinckia indica subsp. indica ATCC 9039 phenylalanyl-tRNA synthetase subunit alpha YP_001833266.1 2465024 R 395963 CDS YP_001833267.1 182679121 6201334 complement(2466200..2466523) 1 NC_010581.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: shn:Shewana3_3575 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 2466523 6201334 Bind_2158 Beijerinckia indica subsp. indica ATCC 9039 CutA1 divalent ion tolerance protein YP_001833267.1 2466200 R 395963 CDS YP_001833268.1 182679122 6199473 complement(2466520..2468358) 1 NC_010581.1 PFAM: creatinase; peptidase M24; KEGG: rpd:RPD_3379 peptidase M24; peptidase M24 2468358 6199473 Bind_2159 Beijerinckia indica subsp. indica ATCC 9039 peptidase M24 YP_001833268.1 2466520 R 395963 CDS YP_001833269.1 182679123 6199111 2468535..2468681 1 NC_010581.1 hypothetical protein 2468681 6199111 Bind_2160 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833269.1 2468535 D 395963 CDS YP_001833270.1 182679124 6198457 2468961..2469515 1 NC_010581.1 hypothetical protein 2469515 6198457 Bind_2161 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833270.1 2468961 D 395963 CDS YP_001833271.1 182679125 6199550 2469521..2470591 1 NC_010581.1 PFAM: Radical SAM domain protein; KEGG: sus:Acid_4134 radical SAM domain protein; radical SAM domain-containing protein 2470591 6199550 Bind_2162 Beijerinckia indica subsp. indica ATCC 9039 radical SAM domain-containing protein YP_001833271.1 2469521 D 395963 CDS YP_001833272.1 182679126 6198589 complement(2470619..2471224) 1 NC_010581.1 KEGG: smd:Smed_4170 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2471224 6198589 Bind_2163 Beijerinckia indica subsp. indica ATCC 9039 thiamine-phosphate pyrophosphorylase YP_001833272.1 2470619 R 395963 CDS YP_001833273.1 182679127 6201123 complement(2471224..2472027) 1 NC_010581.1 PFAM: thiazole biosynthesis family protein; KEGG: oan:Oant_0282 thiazole biosynthesis family protein; thiazole biosynthesis family protein 2472027 6201123 Bind_2164 Beijerinckia indica subsp. indica ATCC 9039 thiazole biosynthesis family protein YP_001833273.1 2471224 R 395963 CDS YP_001833274.1 182679128 6199633 complement(2472057..2472254) 1 NC_010581.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rde:RD1_0748 thiamine biosynthesis protein ThiS, putative; thiamine biosynthesis protein ThiS 2472254 6199633 Bind_2165 Beijerinckia indica subsp. indica ATCC 9039 thiamine biosynthesis protein ThiS YP_001833274.1 2472057 R 395963 CDS YP_001833275.1 182679129 6198706 complement(2472223..2473236) 1 NC_010581.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mlo:mll5793 thiamine biosynthesis oxidoreductase ThiO; glycine oxidase ThiO 2473236 6198706 Bind_2166 Beijerinckia indica subsp. indica ATCC 9039 glycine oxidase ThiO YP_001833275.1 2472223 R 395963 CDS YP_001833276.1 182679130 6199797 2473812..2474411 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: mag:amb0787 glutathione S-transferase; glutathione S-transferase domain-containing protein 2474411 6199797 Bind_2167 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001833276.1 2473812 D 395963 CDS YP_001833277.1 182679131 6199802 2474856..2475776 1 NC_010581.1 KEGG: spc:Sputcn32_3843 hypothetical protein; hypothetical protein 2475776 6199802 Bind_2168 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833277.1 2474856 D 395963 CDS YP_001833278.1 182679132 6200079 2475766..2476251 1 NC_010581.1 hypothetical protein 2476251 6200079 Bind_2169 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833278.1 2475766 D 395963 CDS YP_001833279.1 182679133 6200869 2476248..2478278 1 NC_010581.1 KEGG: spc:Sputcn32_3840 hypothetical protein; hypothetical protein 2478278 6200869 Bind_2170 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833279.1 2476248 D 395963 CDS YP_001833280.1 182679134 6200705 2478503..2478931 1 NC_010581.1 KEGG: mlo:mll5084 hypothetical protein; hypothetical protein 2478931 6200705 Bind_2171 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833280.1 2478503 D 395963 CDS YP_001833281.1 182679135 6201342 join(2478996..2479322,2479322..2479759) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 2479759 6201342 Bind_2172 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001833281.1 2478996 D 395963 CDS YP_001833282.1 182679136 6198575 complement(2479769..2480581) 1 NC_010581.1 PFAM: protein of unknown function DUF344; KEGG: mgm:Mmc1_0146 protein of unknown function DUF344; hypothetical protein 2480581 6198575 Bind_2173 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833282.1 2479769 R 395963 CDS YP_001833283.1 182679137 6201795 2480952..2484182 1 NC_010581.1 TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB; double-strand break repair protein AddB 2484182 6201795 Bind_2174 Beijerinckia indica subsp. indica ATCC 9039 double-strand break repair protein AddB YP_001833283.1 2480952 D 395963 CDS YP_001833284.1 182679138 6200774 2484182..2487676 1 NC_010581.1 TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: pla:Plav_0138 double-strand break repair helicase AddA; double-strand break repair helicase AddA 2487676 6200774 Bind_2175 Beijerinckia indica subsp. indica ATCC 9039 double-strand break repair helicase AddA YP_001833284.1 2484182 D 395963 CDS YP_001833285.1 182679139 6198735 2487768..2488088 1 NC_010581.1 TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin; thioredoxin 2488088 6198735 Bind_2176 Beijerinckia indica subsp. indica ATCC 9039 thioredoxin YP_001833285.1 2487768 D 395963 CDS YP_001833286.1 182679140 6199700 2488160..2488795 1 NC_010581.1 PFAM: Radical SAM domain protein; KEGG: bpe:BP2659 hypothetical protein; radical SAM domain-containing protein 2488795 6199700 Bind_2177 Beijerinckia indica subsp. indica ATCC 9039 radical SAM domain-containing protein YP_001833286.1 2488160 D 395963 CDS YP_001833287.1 182679141 6200536 2488792..2489145 1 NC_010581.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mlo:mll8751 hypothetical protein; queuosine biosynthesis protein QueD 2489145 6200536 Bind_2178 Beijerinckia indica subsp. indica ATCC 9039 queuosine biosynthesis protein QueD YP_001833287.1 2488792 D 395963 CDS YP_001833288.1 182679142 6199832 complement(2489256..2489888) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B2672 transcriptional regulator, TetR family; TetR family transcriptional regulator 2489888 6199832 Bind_2179 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833288.1 2489256 R 395963 CDS YP_001833289.1 182679143 6199302 2489998..2490570 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: zmo:ZMO1887 isochorismatase; isochorismatase hydrolase 2490570 6199302 Bind_2180 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001833289.1 2489998 D 395963 CDS YP_001833290.1 182679144 6201811 2490583..2491671 1 NC_010581.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: zmo:ZMO1886 putative transport protein; membrane protein 2491671 6201811 Bind_2181 Beijerinckia indica subsp. indica ATCC 9039 membrane protein YP_001833290.1 2490583 D 395963 CDS YP_001833291.1 182679145 6201096 complement(2491969..2494383) 1 NC_010581.1 KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2494383 6201096 Bind_2182 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent protease La YP_001833291.1 2491969 R 395963 CDS YP_001833292.1 182679146 6201112 complement(2494641..2495906) 1 NC_010581.1 KEGG: mex:Mext_2417 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA ATPase central domain protein; zinc finger C4 domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 2495906 6201112 Bind_2183 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent Clp protease ATP-binding subunit ClpX YP_001833292.1 2494641 R 395963 CDS YP_001833293.1 182679147 6201770 complement(2496448..2497101) 1 NC_010581.1 PFAM: peptidase S14 ClpP; KEGG: bcs:BCAN_A1128 ATP-dependent Clp protease proteolytic subunit; endopeptidase Clp 2497101 6201770 Bind_2184 Beijerinckia indica subsp. indica ATCC 9039 endopeptidase Clp YP_001833293.1 2496448 R 395963 CDS YP_001833294.1 182679148 6199270 complement(2497905..2499287) 1 NC_010581.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2499287 tig 6199270 tig Beijerinckia indica subsp. indica ATCC 9039 trigger factor YP_001833294.1 2497905 R 395963 CDS YP_001833295.1 182679149 6199371 2499715..2501241 1 NC_010581.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3; multicopper oxidase type 3 2501241 6199371 Bind_2186 Beijerinckia indica subsp. indica ATCC 9039 multicopper oxidase type 3 YP_001833295.1 2499715 D 395963 CDS YP_001833296.1 182679150 6200500 2501285..2501902 1 NC_010581.1 PFAM: Putative ParB-like nuclease; KEGG: bbt:BBta_3524 hypothetical protein; putative ParB-like nuclease 2501902 6200500 Bind_2187 Beijerinckia indica subsp. indica ATCC 9039 putative ParB-like nuclease YP_001833296.1 2501285 D 395963 CDS YP_001833297.1 182679151 6200577 2502018..2503067 1 NC_010581.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_3546 hypothetical protein; hypothetical protein 2503067 6200577 Bind_2188 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833297.1 2502018 D 395963 CDS YP_001833298.1 182679152 6201127 complement(2503103..2503855) 1 NC_010581.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_0988 hypothetical protein; GDSL family lipase 2503855 6201127 Bind_2189 Beijerinckia indica subsp. indica ATCC 9039 GDSL family lipase YP_001833298.1 2503103 R 395963 CDS YP_001833299.1 182679153 6200149 complement(2503855..2504997) 1 NC_010581.1 KEGG: mex:Mext_0989 OpgC protein; OpgC protein 2504997 6200149 Bind_2190 Beijerinckia indica subsp. indica ATCC 9039 OpgC protein YP_001833299.1 2503855 R 395963 CDS YP_001833300.1 182679154 6201108 complement(2505138..2506706) 1 NC_010581.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rpc:RPC_2388 protein of unknown function UPF0031; carbohydrate kinase 2506706 6201108 Bind_2191 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate kinase YP_001833300.1 2505138 R 395963 CDS YP_001833301.1 182679155 6199681 2507098..2507427 1 NC_010581.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: rpa:RPA2669 hypothetical protein; hemimethylated DNA binding protein 2507427 6199681 Bind_2192 Beijerinckia indica subsp. indica ATCC 9039 hemimethylated DNA binding protein YP_001833301.1 2507098 D 395963 CDS YP_001833302.1 182679156 6200099 complement(2507522..2508277) 1 NC_010581.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein; invasion associated locus B family protein 2508277 6200099 Bind_2193 Beijerinckia indica subsp. indica ATCC 9039 invasion associated locus B family protein YP_001833302.1 2507522 R 395963 CDS YP_001833303.1 182679157 6199066 2508662..2510482 1 NC_010581.1 PFAM: extracellular solute-binding protein family 5; KEGG: bov:BOV_A0542 peptide ABC transporter, periplasmic peptide-binding protein; extracellular solute-binding protein 2510482 6199066 Bind_2194 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001833303.1 2508662 D 395963 CDS YP_001833304.1 182679158 6200343 2510625..2511272 1 NC_010581.1 PFAM: DSBA oxidoreductase; KEGG: mlo:mlr0515 similar to FrnE protein; DSBA oxidoreductase 2511272 6200343 Bind_2195 Beijerinckia indica subsp. indica ATCC 9039 DSBA oxidoreductase YP_001833304.1 2510625 D 395963 CDS YP_001833305.1 182679159 6200446 2511776..2512903 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; PHB de-polymerase domain protein; KEGG: bvi:Bcep1808_5356 PHB de-polymerase domain protein; PHB de-polymerase domain-containing protein 2512903 6200446 Bind_2197 Beijerinckia indica subsp. indica ATCC 9039 PHB de-polymerase domain-containing protein YP_001833305.1 2511776 D 395963 CDS YP_001833306.1 182679160 6199709 complement(2513133..2513543) 1 NC_010581.1 KEGG: rle:RL1717 putative lactoylglutathione lyase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 2513543 6199709 Bind_2198 Beijerinckia indica subsp. indica ATCC 9039 methylmalonyl-CoA epimerase YP_001833306.1 2513133 R 395963 CDS YP_001833307.1 182679161 6200199 complement(2513570..2515753) 1 NC_010581.1 KEGG: mex:Mext_4794 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 2515753 6200199 Bind_2199 Beijerinckia indica subsp. indica ATCC 9039 methylmalonyl-CoA mutase large subunit YP_001833307.1 2513570 R 395963 CDS YP_001833308.1 182679162 6200214 complement(2515753..2517627) 1 NC_010581.1 PFAM: methylmalonyl-CoA mutase; KEGG: bbt:BBta_3023 methylmalonyl-CoA mutase small subunit (MCM-beta); methylmalonyl-CoA mutase 2517627 6200214 Bind_2200 Beijerinckia indica subsp. indica ATCC 9039 methylmalonyl-CoA mutase YP_001833308.1 2515753 R 395963 CDS YP_001833309.1 182679163 6201372 2517976..2519850 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: pde:Pden_5103 poly-beta-hydroxybutyrate polymerase domain protein; poly-beta-hydroxybutyrate polymerase domain-containing protein 2519850 6201372 Bind_2201 Beijerinckia indica subsp. indica ATCC 9039 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001833309.1 2517976 D 395963 CDS YP_001833310.1 182679164 6201103 2519908..2521311 1 NC_010581.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: azc:AZC_2420 phosphate acetyl/butyryltransferase family protein; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2521311 6201103 Bind_2202 Beijerinckia indica subsp. indica ATCC 9039 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001833310.1 2519908 D 395963 CDS YP_001833311.1 182679165 6199114 2521372..2523921 1 NC_010581.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_4377 magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 2523921 6199114 Bind_2203 Beijerinckia indica subsp. indica ATCC 9039 magnesium-translocating P-type ATPase YP_001833311.1 2521372 D 395963 CDS YP_001833312.1 182679166 6199758 2524033..2526420 1 NC_010581.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: noc:Noc_2717 putative phosphoketolase; putative phosphoketolase 2526420 6199758 Bind_2204 Beijerinckia indica subsp. indica ATCC 9039 putative phosphoketolase YP_001833312.1 2524033 D 395963 CDS YP_001833313.1 182679167 6200113 complement(2526477..2528777) 1 NC_010581.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bcs:BCAN_B0923 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 2528777 6200113 Bind_2205 Beijerinckia indica subsp. indica ATCC 9039 RNA-binding S1 domain-containing protein YP_001833313.1 2526477 R 395963 CDS YP_001833314.1 182679168 6199474 2529247..2531775 1 NC_010581.1 PFAM: sulfatase; KEGG: xau:Xaut_2420 sulfatase; sulfatase 2531775 6199474 Bind_2206 Beijerinckia indica subsp. indica ATCC 9039 sulfatase YP_001833314.1 2529247 D 395963 CDS YP_001833315.1 182679169 6201352 2531824..2532045 1 NC_010581.1 hypothetical protein 2532045 6201352 Bind_2207 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833315.1 2531824 D 395963 CDS YP_001833316.1 182679170 6201279 complement(2532131..2532802) 1 NC_010581.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI0682 putative transcriptional regulator, GntR family; GntR family transcriptional regulator 2532802 6201279 Bind_2208 Beijerinckia indica subsp. indica ATCC 9039 GntR family transcriptional regulator YP_001833316.1 2532131 R 395963 CDS YP_001833317.1 182679171 6198660 complement(2532914..2534248) 1 NC_010581.1 PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase; hydroxypyruvate reductase 2534248 6198660 Bind_2209 Beijerinckia indica subsp. indica ATCC 9039 hydroxypyruvate reductase YP_001833317.1 2532914 R 395963 CDS YP_001833318.1 182679172 6200703 complement(2534245..2535612) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0681 putative glucarate transporter; major facilitator transporter 2535612 6200703 Bind_2210 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833318.1 2534245 R 395963 CDS YP_001833319.1 182679173 6198419 2535838..2537118 1 NC_010581.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gdi:GDI0680 putative acyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2537118 6198419 Bind_2211 Beijerinckia indica subsp. indica ATCC 9039 L-carnitine dehydratase/bile acid-inducible protein F YP_001833319.1 2535838 D 395963 CDS YP_001833320.1 182679174 6199337 2537115..2537903 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI0679 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 2537903 6199337 Bind_2212 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001833320.1 2537115 D 395963 CDS YP_001833321.1 182679175 6201302 complement(2537910..2538281) 1 NC_010581.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bch:Bcen2424_4927 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2538281 6201302 Bind_2213 Beijerinckia indica subsp. indica ATCC 9039 antibiotic biosynthesis monooxygenase YP_001833321.1 2537910 R 395963 CDS YP_001833322.1 182679176 6200122 2538425..2538898 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: rru:Rru_A1441 transcriptional regulator, MarR family; MarR family transcriptional regulator 2538898 6200122 Bind_2214 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001833322.1 2538425 D 395963 CDS YP_001833323.1 182679177 6199244 2539745..2541388 1 NC_010581.1 KEGG: nar:Saro_3404 hypothetical protein; hypothetical protein 2541388 6199244 Bind_2216 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833323.1 2539745 D 395963 CDS YP_001833324.1 182679178 6198707 complement(2541706..2542779) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_L_281 hypothetical protein; alcohol dehydrogenase 2542779 6198707 Bind_2217 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001833324.1 2541706 R 395963 CDS YP_001833325.1 182679179 6199154 complement(2542961..2544916) 1 NC_010581.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: smd:Smed_4035 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 2544916 6199154 Bind_2218 Beijerinckia indica subsp. indica ATCC 9039 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001833325.1 2542961 R 395963 CDS YP_001833326.1 182679180 6199109 complement(2545122..2545901) 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: cko:CKO_01537 hypothetical protein; HAD family hydrolase 2545901 6199109 Bind_2219 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001833326.1 2545122 R 395963 CDS YP_001833327.1 182679181 6200845 complement(2546110..2546943) 1 NC_010581.1 PFAM: UspA domain protein; KEGG: nha:Nham_1935 UspA; UspA domain-containing protein 2546943 6200845 Bind_2220 Beijerinckia indica subsp. indica ATCC 9039 UspA domain-containing protein YP_001833327.1 2546110 R 395963 CDS YP_001833328.1 182679182 6199536 2547114..2548676 1 NC_010581.1 KEGG: mlo:mll6593 hypothetical protein; hypothetical protein 2548676 6199536 Bind_2221 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833328.1 2547114 D 395963 CDS YP_001833329.1 182679183 6199391 2548777..2549508 1 NC_010581.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_3686 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region 2549508 6199391 Bind_2222 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c biogenesis protein transmembrane region YP_001833329.1 2548777 D 395963 CDS YP_001833330.1 182679184 6199845 2549684..2550769 1 NC_010581.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2550769 rpsB 6199845 rpsB Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S2 YP_001833330.1 2549684 D 395963 CDS YP_001833331.1 182679185 6198512 2550862..2551794 1 NC_010581.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2551794 tsf 6198512 tsf Beijerinckia indica subsp. indica ATCC 9039 elongation factor Ts YP_001833331.1 2550862 D 395963 CDS YP_001833332.1 182679186 6200285 2551951..2552592 1 NC_010581.1 TIGRFAM: DNA ligase D, 3'-phosphoesterase domain protein; KEGG: bra:BRADO5823 ATP-dependent DNA ligase; DNA ligase 2552592 6200285 Bind_2225 Beijerinckia indica subsp. indica ATCC 9039 DNA ligase YP_001833332.1 2551951 D 395963 CDS YP_001833333.1 182679187 6199407 2552635..2553534 1 NC_010581.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: xau:Xaut_4365 DNA ligase D; DNA polymerase LigD polymerase subunit 2553534 6199407 Bind_2226 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase LigD polymerase subunit YP_001833333.1 2552635 D 395963 CDS YP_001833334.1 182679188 6199115 2553740..2554090 1 NC_010581.1 KEGG: mex:Mext_1412 hypothetical protein; hypothetical protein 2554090 6199115 Bind_2227 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833334.1 2553740 D 395963 CDS YP_001833335.1 182679189 6198437 2554272..2554979 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA1915 two-component transcriptional regulator FeuP, winged helix family; two component transcriptional regulator 2554979 6198437 Bind_2228 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001833335.1 2554272 D 395963 CDS YP_001833336.1 182679190 6201006 2554976..2556367 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1409 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2556367 6201006 Bind_2229 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833336.1 2554976 D 395963 CDS YP_001833337.1 182679191 6200397 2556422..2557576 1 NC_010581.1 KEGG: azc:AZC_1132 cytochrome c-type biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; cytochrome c-type biogenesis protein CcmI 2557576 6200397 Bind_2230 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c-type biogenesis protein CcmI YP_001833337.1 2556422 D 395963 CDS YP_001833338.1 182679192 6199346 2557850..2558332 1 NC_010581.1 PFAM: CcmE/CycJ protein; KEGG: azc:AZC_1133 cytochrome c-type biogenesis protein; CcmE/CycJ protein 2558332 6199346 Bind_2231 Beijerinckia indica subsp. indica ATCC 9039 CcmE/CycJ protein YP_001833338.1 2557850 D 395963 CDS YP_001833339.1 182679193 6199843 2558554..2560536 1 NC_010581.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpd:RPD_2003 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 2560536 6199843 Bind_2232 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c-type biogenesis protein CcmF YP_001833339.1 2558554 D 395963 CDS YP_001833340.1 182679194 6200091 2560540..2561070 1 NC_010581.1 PFAM: cytochrome C biogenesis protein; KEGG: rpb:RPB_3447 cytochrome c biogenesis protein; cytochrome C biogenesis protein 2561070 6200091 Bind_2233 Beijerinckia indica subsp. indica ATCC 9039 cytochrome C biogenesis protein YP_001833340.1 2560540 D 395963 CDS YP_001833341.1 182679195 6198155 complement(2561065..2562396) 1 NC_010581.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rle:RL3183 putative transmembrane protein; hypothetical protein 2562396 6198155 Bind_2234 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833341.1 2561065 R 395963 CDS YP_001833342.1 182679196 6201155 2562957..2564546 1 NC_010581.1 KEGG: rpe:RPE_1939 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2564546 6201155 Bind_2235 Beijerinckia indica subsp. indica ATCC 9039 protease Do YP_001833342.1 2562957 D 395963 CDS YP_001833343.1 182679197 6199766 2564713..2565396 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver; two component transcriptional regulator 2565396 6199766 Bind_2236 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001833343.1 2564713 D 395963 CDS YP_001833344.1 182679198 6198443 2565380..2566813 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2566813 6198443 Bind_2237 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833344.1 2565380 D 395963 CDS YP_001833345.1 182679199 6198398 2566824..2569796 1 NC_010581.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 2569796 6198398 Bind_2238 Beijerinckia indica subsp. indica ATCC 9039 (glutamate--ammonia-ligase) adenylyltransferase YP_001833345.1 2566824 D 395963 CDS YP_001833346.1 182679200 6201132 complement(2570967..2572661) 1 NC_010581.1 KEGG: mxa:MXAN_5387 hypothetical protein; hypothetical protein 2572661 6201132 Bind_2240 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833346.1 2570967 R 395963 CDS YP_001833347.1 182679201 6200417 complement(2572911..2574242) 1 NC_010581.1 PFAM: sodium:dicarboxylate symporter; KEGG: bra:BRADO2301 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter 2574242 6200417 Bind_2241 Beijerinckia indica subsp. indica ATCC 9039 sodium:dicarboxylate symporter YP_001833347.1 2572911 R 395963 CDS YP_001833348.1 182679202 6199658 2574464..2577541 1 NC_010581.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: xau:Xaut_4315 excinuclease ABC, A subunit; excinuclease ABC subunit A 2577541 6199658 Bind_2242 Beijerinckia indica subsp. indica ATCC 9039 excinuclease ABC subunit A YP_001833348.1 2574464 D 395963 CDS YP_001833349.1 182679203 6200470 2578239..2579654 1 NC_010581.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 2579654 6200470 Bind_2243 Beijerinckia indica subsp. indica ATCC 9039 tRNA (uracil-5-)-methyltransferase Gid YP_001833349.1 2578239 D 395963 CDS YP_001833350.1 182679204 6201045 complement(2579709..2579951) 1 NC_010581.1 hypothetical protein 2579951 6201045 Bind_2244 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833350.1 2579709 R 395963 CDS YP_001833351.1 182679205 6200765 2580470..2581291 1 NC_010581.1 KEGG: azc:AZC_1792 hypothetical protein; hypothetical protein 2581291 6200765 Bind_2245 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833351.1 2580470 D 395963 CDS YP_001833352.1 182679206 6198765 complement(2581434..2581607) 1 NC_010581.1 PFAM: protein of unknown function DUF1328; KEGG: atc:AGR_L_805 hypothetical protein; hypothetical protein 2581607 6198765 Bind_2246 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833352.1 2581434 R 395963 CDS YP_001833353.1 182679207 6198525 complement(2581762..2582730) 1 NC_010581.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase 2582730 6198525 Bind_2247 Beijerinckia indica subsp. indica ATCC 9039 4-hydroxybenzoate polyprenyltransferase YP_001833353.1 2581762 R 395963 CDS YP_001833354.1 182679208 6200089 complement(2582730..2583179) 1 NC_010581.1 KEGG: xau:Xaut_1487 hypothetical protein; hypothetical protein 2583179 6200089 Bind_2248 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833354.1 2582730 R 395963 CDS YP_001833355.1 182679209 6198891 2583308..2584060 1 NC_010581.1 PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 protein of unknown function DUF558; hypothetical protein 2584060 6198891 Bind_2249 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833355.1 2583308 D 395963 CDS YP_001833356.1 182679210 6198803 2584285..2584626 1 NC_010581.1 KEGG: rpe:RPE_2414 hypothetical protein; hypothetical protein 2584626 6198803 Bind_2250 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833356.1 2584285 D 395963 CDS YP_001833357.1 182679211 6200498 complement(2584700..2586082) 1 NC_010581.1 KEGG: xau:Xaut_4204 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; glutamate--cysteine ligase 2586082 6200498 Bind_2251 Beijerinckia indica subsp. indica ATCC 9039 glutamate--cysteine ligase YP_001833357.1 2584700 R 395963 CDS YP_001833358.1 182679212 6200821 complement(2586382..2587212) 1 NC_010581.1 KEGG: mlo:mll6900 hypothetical protein; hypothetical protein 2587212 6200821 Bind_2252 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833358.1 2586382 R 395963 CDS YP_001833359.1 182679213 6200042 complement(2587454..2588758) 1 NC_010581.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: azc:AZC_2963 multi antimicrobial extrusion protein; MATE efflux family protein 2588758 6200042 Bind_2253 Beijerinckia indica subsp. indica ATCC 9039 MATE efflux family protein YP_001833359.1 2587454 R 395963 CDS YP_001833360.1 182679214 6201019 complement(2589053..2589400) 1 NC_010581.1 hypothetical protein 2589400 6201019 Bind_2254 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833360.1 2589053 R 395963 CDS YP_001833361.1 182679215 6199406 complement(2589940..2590581) 1 NC_010581.1 PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4503 SNARE associated Golgi protein; hypothetical protein 2590581 6199406 Bind_2255 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833361.1 2589940 R 395963 CDS YP_001833362.1 182679216 6200789 complement(2591326..2592000) 1 NC_010581.1 PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4503 SNARE associated Golgi protein; hypothetical protein 2592000 6200789 Bind_2256 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833362.1 2591326 R 395963 CDS YP_001833363.1 182679217 6200843 complement(2592129..2593187) 1 NC_010581.1 KEGG: bcs:BCAN_A0113 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 2593187 6200843 Bind_2257 Beijerinckia indica subsp. indica ATCC 9039 sulfate ABC transporter ATPase YP_001833363.1 2592129 R 395963 CDS YP_001833364.1 182679218 6199682 complement(2593306..2594226) 1 NC_010581.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A3402 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter permease 2594226 6199682 Bind_2258 Beijerinckia indica subsp. indica ATCC 9039 sulfate ABC transporter permease YP_001833364.1 2593306 R 395963 CDS YP_001833365.1 182679219 6198864 complement(2594219..2595049) 1 NC_010581.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ret:RHE_PE00258 probable sulfate uptake ABC transporter, permease protein; sulfate ABC transporter permease 2595049 6198864 Bind_2259 Beijerinckia indica subsp. indica ATCC 9039 sulfate ABC transporter permease YP_001833365.1 2594219 R 395963 CDS YP_001833366.1 182679220 6199403 2595232..2595528 1 NC_010581.1 KEGG: bmt:BSUIS_A0181 hypothetical protein; hypothetical protein 2595528 6199403 Bind_2260 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833366.1 2595232 D 395963 CDS YP_001833367.1 182679221 6199972 2595760..2597421 1 NC_010581.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: oan:Oant_0190 sulfite reductase (ferredoxin); sulfite reductase (ferredoxin) 2597421 6199972 Bind_2261 Beijerinckia indica subsp. indica ATCC 9039 sulfite reductase (ferredoxin) YP_001833367.1 2595760 D 395963 CDS YP_001833368.1 182679222 6200547 2597408..2598148 1 NC_010581.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: sil:SPO2635 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 2598148 6200547 Bind_2262 Beijerinckia indica subsp. indica ATCC 9039 phosphoadenosine phosphosulfate reductase YP_001833368.1 2597408 D 395963 CDS YP_001833369.1 182679223 6200430 2598150..2598656 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: ccr:CC_1120 hypothetical protein; hypothetical protein 2598656 6200430 Bind_2263 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833369.1 2598150 D 395963 CDS YP_001833370.1 182679224 6198417 2598775..2599656 1 NC_010581.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: xau:Xaut_1265 protein of unknown function zinc metallopeptidase putative; hypothetical protein 2599656 6198417 Bind_2264 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833370.1 2598775 D 395963 CDS YP_001833371.1 182679225 6200320 complement(2599733..2600251) 1 NC_010581.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pfo:Pfl_3712 cupin region; cupin 2600251 6200320 Bind_2265 Beijerinckia indica subsp. indica ATCC 9039 cupin YP_001833371.1 2599733 R 395963 CDS YP_001833372.1 182679226 6200276 2600519..2601856 1 NC_010581.1 KEGG: ana:all2748 hypothetical protein; hypothetical protein 2601856 6200276 Bind_2266 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833372.1 2600519 D 395963 CDS YP_001833373.1 182679227 6198757 complement(2602014..2603366) 1 NC_010581.1 PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein 2603366 6198757 Bind_2267 Beijerinckia indica subsp. indica ATCC 9039 transposase IS4 family protein YP_001833373.1 2602014 R 395963 CDS YP_001833374.1 182679228 6200495 2603564..2604136 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3561 putative acetyltransferase; N-acetyltransferase GCN5 2604136 6200495 Bind_2268 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001833374.1 2603564 D 395963 CDS YP_001833375.1 182679229 6200118 2604333..2605025 1 NC_010581.1 KEGG: pla:Plav_1991 hypothetical protein; hypothetical protein 2605025 6200118 Bind_2269 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833375.1 2604333 D 395963 CDS YP_001833376.1 182679230 6199340 2605894..2606463 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 2606463 6199340 Bind_2270 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833376.1 2605894 D 395963 CDS YP_001833377.1 182679231 6201159 2607144..2607728 1 NC_010581.1 KEGG: nwi:Nwi_3052 transcriptional regulatory protein, TetR family; TetR family transcriptional regulator 2607728 6201159 Bind_2272 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833377.1 2607144 D 395963 CDS YP_001833378.1 182679232 6199541 complement(2607972..2608268) 1 NC_010581.1 hypothetical protein 2608268 6199541 Bind_2273 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833378.1 2607972 R 395963 CDS YP_001833379.1 182679233 6201190 complement(2608298..2608507) 1 NC_010581.1 hypothetical protein 2608507 6201190 Bind_2274 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833379.1 2608298 R 395963 CDS YP_001833380.1 182679234 6199395 complement(2608971..2609858) 1 NC_010581.1 KEGG: rci:LRC395 hypothetical protein; hypothetical protein 2609858 6199395 Bind_2275 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833380.1 2608971 R 395963 CDS YP_001833381.1 182679235 6199530 2609975..2611327 1 NC_010581.1 PFAM: transposase IS4 family protein; KEGG: xau:Xaut_0557 transposase IS4 family protein; transposase IS4 family protein 2611327 6199530 Bind_2276 Beijerinckia indica subsp. indica ATCC 9039 transposase IS4 family protein YP_001833381.1 2609975 D 395963 CDS YP_001833382.1 182679236 6200777 complement(2611550..2612239) 1 NC_010581.1 KEGG: mex:Mext_1008 hypothetical protein; hypothetical protein 2612239 6200777 Bind_2277 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833382.1 2611550 R 395963 CDS YP_001833383.1 182679237 6201725 complement(2612244..2612744) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cak:Caul_0180 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2612744 6201725 Bind_2278 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001833383.1 2612244 R 395963 CDS YP_001833384.1 182679238 6201130 complement(2612812..2613363) 1 NC_010581.1 KEGG: bja:bll2513 hypothetical protein; hypothetical protein 2613363 6201130 Bind_2279 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833384.1 2612812 R 395963 CDS YP_001833385.1 182679239 6199335 complement(2613363..2613827) 1 NC_010581.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 2613827 6199335 Bind_2280 Beijerinckia indica subsp. indica ATCC 9039 activator of Hsp90 ATPase 1 family protein YP_001833385.1 2613363 R 395963 CDS YP_001833386.1 182679240 6199697 2614166..2614777 1 NC_010581.1 PFAM: HupE/UreJ protein; KEGG: xau:Xaut_2188 HupE/UreJ protein; HupE/UreJ protein 2614777 6199697 Bind_2281 Beijerinckia indica subsp. indica ATCC 9039 HupE/UreJ protein YP_001833386.1 2614166 D 395963 CDS YP_001833387.1 182679241 6198661 complement(2614858..2615961) 1 NC_010581.1 KEGG: mex:Mext_3635 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 2615961 6198661 Bind_2282 Beijerinckia indica subsp. indica ATCC 9039 molybdate ABC transporter ATPase YP_001833387.1 2614858 R 395963 CDS YP_001833388.1 182679242 6199961 complement(2615958..2616650) 1 NC_010581.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 2616650 6199961 Bind_2283 Beijerinckia indica subsp. indica ATCC 9039 molybdate ABC transporter inner membrane subunit YP_001833388.1 2615958 R 395963 CDS YP_001833389.1 182679243 6200786 complement(2616939..2617751) 1 NC_010581.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_C_4642 molybdate-binding periplasmic protein; molybdenum ABC transporter periplasmic molybdate-binding protein 2617751 6200786 Bind_2284 Beijerinckia indica subsp. indica ATCC 9039 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001833389.1 2616939 R 395963 CDS YP_001833390.1 182679244 6201046 2618078..2618518 1 NC_010581.1 PFAM: type IV pilus assembly PilZ; KEGG: bmf:BAB2_1083 hypothetical protein; type IV pilus assembly PilZ 2618518 6201046 Bind_2285 Beijerinckia indica subsp. indica ATCC 9039 type IV pilus assembly PilZ YP_001833390.1 2618078 D 395963 CDS YP_001833391.1 182679245 6200475 complement(2618927..2619433) 1 NC_010581.1 PFAM: protein of unknown function DUF892; KEGG: xau:Xaut_3218 protein of unknown function DUF892; hypothetical protein 2619433 6200475 Bind_2287 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833391.1 2618927 R 395963 CDS YP_001833392.1 182679246 6200147 2620254..2620454 1 NC_010581.1 PFAM: CsbD family protein; KEGG: rpa:RPA4217 hypothetical protein; CsbD family protein 2620454 6200147 Bind_2288 Beijerinckia indica subsp. indica ATCC 9039 CsbD family protein YP_001833392.1 2620254 D 395963 CDS YP_001833393.1 182679247 6200483 2620500..2620661 1 NC_010581.1 hypothetical protein 2620661 6200483 Bind_2289 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833393.1 2620500 D 395963 CDS YP_001833394.1 182679248 6198762 complement(2620834..2622123) 1 NC_010581.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mag:amb1842 beta-glucosidase-related glycosidase; glycoside hydrolase family 3 2622123 6198762 Bind_2290 Beijerinckia indica subsp. indica ATCC 9039 glycoside hydrolase family 3 YP_001833394.1 2620834 R 395963 CDS YP_001833395.1 182679249 6200076 2624183..2624377 1 NC_010581.1 hypothetical protein 2624377 6200076 Bind_2293 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833395.1 2624183 D 395963 CDS YP_001833396.1 182679250 6199080 2624517..2625269 1 NC_010581.1 PFAM: porin; KEGG: oan:Oant_0133 porin; porin 2625269 6199080 Bind_2294 Beijerinckia indica subsp. indica ATCC 9039 porin YP_001833396.1 2624517 D 395963 CDS YP_001833397.1 182679251 6199161 2625444..2626793 1 NC_010581.1 KEGG: azc:AZC_1254 putative 2-methylthioadenine synthetase; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 2626793 6199161 Bind_2295 Beijerinckia indica subsp. indica ATCC 9039 MiaB-like tRNA modifying protein YliG YP_001833397.1 2625444 D 395963 CDS YP_001833398.1 182679252 6199771 complement(2626865..2628664) 1 NC_010581.1 PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2628664 6199771 Bind_2296 Beijerinckia indica subsp. indica ATCC 9039 aminodeoxychorismate lyase YP_001833398.1 2626865 R 395963 CDS YP_001833399.1 182679253 6200979 complement(2629037..2630299) 1 NC_010581.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: xau:Xaut_3133 beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 2630299 6200979 Bind_2297 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001833399.1 2629037 R 395963 CDS YP_001833400.1 182679254 6199273 complement(2630858..2631178) 1 NC_010581.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: mes:Meso_1767 acyl carrier protein; acyl carrier protein 2631178 6199273 Bind_2298 Beijerinckia indica subsp. indica ATCC 9039 acyl carrier protein YP_001833400.1 2630858 R 395963 CDS YP_001833401.1 182679255 6199988 complement(2631373..2632110) 1 NC_010581.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rpc:RPC_2300 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 2632110 6199988 Bind_2299 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-(acyl-carrier-protein) reductase YP_001833401.1 2631373 R 395963 CDS YP_001833402.1 182679256 6198476 complement(2632185..2633159) 1 NC_010581.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rpd:RPD_2983 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2633159 6198476 Bind_2300 Beijerinckia indica subsp. indica ATCC 9039 malonyl CoA-acyl carrier protein transacylase YP_001833402.1 2632185 R 395963 CDS YP_001833403.1 182679257 6200440 2633331..2633747 1 NC_010581.1 KEGG: bbt:BBta_7578 hypothetical protein; hypothetical protein 2633747 6200440 Bind_2301 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833403.1 2633331 D 395963 CDS YP_001833404.1 182679258 6200501 complement(2633769..2635115) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3069 putative transporter transmembrane protein; major facilitator transporter 2635115 6200501 Bind_2302 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833404.1 2633769 R 395963 CDS YP_001833405.1 182679259 6200894 2635501..2635956 1 NC_010581.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2635956 rpsF 6200894 rpsF Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S6 YP_001833405.1 2635501 D 395963 CDS YP_001833406.1 182679260 6201580 2635956..2636198 1 NC_010581.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2636198 rpsR 6201580 rpsR Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S18 YP_001833406.1 2635956 D 395963 CDS YP_001833407.1 182679261 6199965 2636414..2637523 1 NC_010581.1 KEGG: rpd:RPD_2987 hypothetical protein; hypothetical protein 2637523 6199965 Bind_2305 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833407.1 2636414 D 395963 CDS YP_001833408.1 182679262 6200094 2637585..2638154 1 NC_010581.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2638154 rplI 6200094 rplI Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L9 YP_001833408.1 2637585 D 395963 CDS YP_001833409.1 182679263 6201008 2638371..2639864 1 NC_010581.1 KEGG: mex:Mext_3938 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 2639864 6201008 Bind_2307 Beijerinckia indica subsp. indica ATCC 9039 replicative DNA helicase YP_001833409.1 2638371 D 395963 CDS YP_001833410.1 182679264 6199842 2639861..2641000 1 NC_010581.1 KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2641000 6199842 Bind_2308 Beijerinckia indica subsp. indica ATCC 9039 alanine racemase YP_001833410.1 2639861 D 395963 CDS YP_001833411.1 182679265 6200505 2641013..2642428 1 NC_010581.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2642428 6200505 Bind_2309 Beijerinckia indica subsp. indica ATCC 9039 DNA repair protein RadA YP_001833411.1 2641013 D 395963 CDS YP_001833412.1 182679266 6199967 2642618..2643193 1 NC_010581.1 PFAM: Colicin V production protein; KEGG: rpd:RPD_2996 colicin V production protein; colicin V production protein 2643193 6199967 Bind_2310 Beijerinckia indica subsp. indica ATCC 9039 colicin V production protein YP_001833412.1 2642618 D 395963 CDS YP_001833413.1 182679267 6201726 2643984..2645489 1 NC_010581.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2645489 6201726 Bind_2311 Beijerinckia indica subsp. indica ATCC 9039 amidophosphoribosyltransferase YP_001833413.1 2643984 D 395963 CDS YP_001833414.1 182679268 6199396 2645554..2646339 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2646339 6199396 Bind_2312 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833414.1 2645554 D 395963 CDS YP_001833415.1 182679269 6198511 2646877..2648130 1 NC_010581.1 PFAM: AAA-4 family protein; KEGG: scl:sce6624 hypothetical protein; putative transcriptional regulator 2648130 6198511 Bind_2313 Beijerinckia indica subsp. indica ATCC 9039 putative transcriptional regulator YP_001833415.1 2646877 D 395963 CDS YP_001833416.1 182679270 6199973 2648608..2651322 1 NC_010581.1 KEGG: fal:FRAAL3987 putative ATP/GTP-binding protein; hypothetical protein 2651322 6199973 Bind_2314 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833416.1 2648608 D 395963 CDS YP_001833417.1 182679271 6199877 complement(2651700..2652221) 1 NC_010581.1 KEGG: atc:AGR_L_450 hypothetical protein; hypothetical protein 2652221 6199877 Bind_2315 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833417.1 2651700 R 395963 CDS YP_001833418.1 182679272 6201360 complement(2652259..2652486) 1 NC_010581.1 hypothetical protein 2652486 6201360 Bind_2316 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833418.1 2652259 R 395963 CDS YP_001833419.1 182679273 6200544 complement(2652601..2654013) 1 NC_010581.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2654013 engA 6200544 engA Beijerinckia indica subsp. indica ATCC 9039 GTP-binding protein EngA YP_001833419.1 2652601 R 395963 CDS YP_001833420.1 182679274 6200228 complement(2654013..2654777) 1 NC_010581.1 KEGG: rpe:RPE_3347 hypothetical protein; hypothetical protein 2654777 6200228 Bind_2318 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833420.1 2654013 R 395963 CDS YP_001833421.1 182679275 6200093 2655459..2655926 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: bja:blr3851 transcriptional regulatory protein; MarR family transcriptional regulator 2655926 6200093 Bind_2319 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001833421.1 2655459 D 395963 CDS YP_001833422.1 182679276 6199491 2655996..2658137 1 NC_010581.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: azc:AZC_1076 hypothetical protein; fusaric acid resistance protein region 2658137 6199491 Bind_2320 Beijerinckia indica subsp. indica ATCC 9039 fusaric acid resistance protein region YP_001833422.1 2655996 D 395963 CDS YP_001833423.1 182679277 6198517 2658134..2658343 1 NC_010581.1 PFAM: protein of unknown function DUF1656; KEGG: rme:Rmet_4792 protein of unknown function DUF1656; hypothetical protein 2658343 6198517 Bind_2321 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833423.1 2658134 D 395963 CDS YP_001833424.1 182679278 6199691 2658349..2659296 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bov:BOV_A0706 HlyD family secretion protein; RND family efflux transporter MFP subunit 2659296 6199691 Bind_2322 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833424.1 2658349 D 395963 CDS YP_001833425.1 182679279 6200174 complement(2659668..2659985) 1 NC_010581.1 hypothetical protein 2659985 6200174 Bind_2323 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833425.1 2659668 R 395963 CDS YP_001833426.1 182679280 6201242 2660435..2660836 1 NC_010581.1 KEGG: bra:BRADO1841 hypothetical protein; hypothetical protein 2660836 6201242 Bind_2324 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833426.1 2660435 D 395963 CDS YP_001833427.1 182679281 6199304 complement(2661030..2661734) 1 NC_010581.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: nha:Nham_1234 aquaporin Z; MIP family channel protein 2661734 6199304 Bind_2325 Beijerinckia indica subsp. indica ATCC 9039 MIP family channel protein YP_001833427.1 2661030 R 395963 CDS YP_001833428.1 182679282 6198910 complement(2661910..2662950) 1 NC_010581.1 PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein 2662950 6198910 Bind_2326 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein YP_001833428.1 2661910 R 395963 CDS YP_001833429.1 182679283 6200169 complement(2662954..2665326) 1 NC_010581.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gvi:glr0349 ferrichrome-iron receptor; TonB-dependent siderophore receptor 2665326 6200169 Bind_2327 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent siderophore receptor YP_001833429.1 2662954 R 395963 CDS YP_001833430.1 182679284 6198733 complement(2665681..2666499) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_0955 ABC transporter related; ABC transporter-like protein 2666499 6198733 Bind_2328 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833430.1 2665681 R 395963 CDS YP_001833431.1 182679285 6200927 complement(2666496..2667542) 1 NC_010581.1 PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein; transport system permease 2667542 6200927 Bind_2329 Beijerinckia indica subsp. indica ATCC 9039 transport system permease YP_001833431.1 2666496 R 395963 CDS YP_001833432.1 182679286 6200434 complement(2667520..2668638) 1 NC_010581.1 PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic binding protein 2668638 6200434 Bind_2330 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein YP_001833432.1 2667520 R 395963 CDS YP_001833433.1 182679287 6201090 2668844..2669281 1 NC_010581.1 KEGG: mca:MCA1565 protozoan/cyanobacterial globin family protein; hypothetical protein 2669281 6201090 Bind_2331 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833433.1 2668844 D 395963 CDS YP_001833434.1 182679288 6199296 complement(2669529..2669822) 1 NC_010581.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bmu:Bmul_1768 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2669822 6199296 Bind_2332 Beijerinckia indica subsp. indica ATCC 9039 antibiotic biosynthesis monooxygenase YP_001833434.1 2669529 R 395963 CDS YP_001833435.1 182679289 6200733 complement(2670145..2670606) 1 NC_010581.1 PFAM: ribonuclease H; KEGG: azc:AZC_1466 ribonuclease H; ribonuclease H 2670606 6200733 Bind_2333 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease H YP_001833435.1 2670145 R 395963 CDS YP_001833436.1 182679290 6198647 complement(2670603..2671568) 1 NC_010581.1 KEGG: xau:Xaut_2356 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase 2671568 6198647 Bind_2334 Beijerinckia indica subsp. indica ATCC 9039 homoserine kinase YP_001833436.1 2670603 R 395963 CDS YP_001833437.1 182679291 6199672 complement(2672362..2673522) 1 NC_010581.1 KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 2673522 6199672 Bind_2335 Beijerinckia indica subsp. indica ATCC 9039 queuine tRNA-ribosyltransferase YP_001833437.1 2672362 R 395963 CDS YP_001833438.1 182679292 6201054 complement(2673519..2674622) 1 NC_010581.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2674622 queA 6201054 queA Beijerinckia indica subsp. indica ATCC 9039 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001833438.1 2673519 R 395963 CDS YP_001833439.1 182679293 6200439 complement(2674677..2675132) 1 NC_010581.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bra:BRADO3995 peptidyl prolyl cis-trans isomerase (rotamase B); cyclophilin type peptidyl-prolyl cis-trans isomerase 2675132 6200439 Bind_2337 Beijerinckia indica subsp. indica ATCC 9039 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001833439.1 2674677 R 395963 CDS YP_001833440.1 182679294 6201471 complement(2675226..2676017) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03365 probable short-chain alcohol dehydrogenase protein; short-chain dehydrogenase/reductase SDR 2676017 6201471 Bind_2338 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833440.1 2675226 R 395963 CDS YP_001833441.1 182679295 6200482 complement(2676109..2677020) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr4907 transcriptional regulator (AraC/XylS family); AraC family transcriptional regulator 2677020 6200482 Bind_2339 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833441.1 2676109 R 395963 CDS YP_001833442.1 182679296 6199458 complement(2677179..2678099) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0209 ribose ABC transporter, periplasmic ribose-binding protein; periplasmic binding protein/LacI transcriptional regulator 2678099 6199458 Bind_2340 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833442.1 2677179 R 395963 CDS YP_001833443.1 182679297 6200120 complement(2678198..2679244) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr4915 xylitol (sorbitol) dehydrogenase; alcohol dehydrogenase 2679244 6200120 Bind_2341 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001833443.1 2678198 R 395963 CDS YP_001833444.1 182679298 6200039 complement(2679553..2680038) 1 NC_010581.1 PFAM: protein of unknown function DUF336; KEGG: cak:Caul_1764 protein of unknown function DUF336; hypothetical protein 2680038 6200039 Bind_2342 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833444.1 2679553 R 395963 CDS YP_001833445.1 182679299 6200425 complement(2680213..2680800) 1 NC_010581.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2680800 6200425 Bind_2343 Beijerinckia indica subsp. indica ATCC 9039 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001833445.1 2680213 R 395963 CDS YP_001833446.1 182679300 6199264 complement(2680826..2681329) 1 NC_010581.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2681329 coaD 6199264 coaD Beijerinckia indica subsp. indica ATCC 9039 phosphopantetheine adenylyltransferase YP_001833446.1 2680826 R 395963 CDS YP_001833447.1 182679301 6199143 complement(2681378..2682412) 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_5550 putative thioredoxin reductase, FAD/NAD(P)-binding; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2682412 6199143 Bind_2345 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001833447.1 2681378 R 395963 CDS YP_001833448.1 182679302 6199251 complement(2682493..2682813) 1 NC_010581.1 PFAM: ferredoxin; KEGG: rpa:RPA3956 ferredoxin; ferredoxin 2682813 6199251 Bind_2346 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin YP_001833448.1 2682493 R 395963 CDS YP_001833449.1 182679303 6199583 complement(2683171..2683575) 1 NC_010581.1 PFAM: Hpt domain protein; KEGG: sme:SMc00191 hypothetical protein; Hpt domain-containing protein 2683575 6199583 Bind_2347 Beijerinckia indica subsp. indica ATCC 9039 Hpt domain-containing protein YP_001833449.1 2683171 R 395963 CDS YP_001833450.1 182679304 6200187 2684559..2690609 1 NC_010581.1 KEGG: rpa:RPA3958 hypothetical protein; hypothetical protein 2690609 6200187 Bind_2348 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833450.1 2684559 D 395963 CDS YP_001833451.1 182679305 6198573 2691335..2691649 1 NC_010581.1 KEGG: acr:Acry_0749 hypothetical protein; hypothetical protein 2691649 6198573 Bind_2349 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833451.1 2691335 D 395963 CDS YP_001833452.1 182679306 6200331 2691766..2692680 1 NC_010581.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2692680 6200331 Bind_2350 Beijerinckia indica subsp. indica ATCC 9039 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001833452.1 2691766 D 395963 CDS YP_001833453.1 182679307 6200069 2693473..2693931 1 NC_010581.1 KEGG: bbt:BBta_2161 hypothetical protein; hypothetical protein 2693931 6200069 Bind_2352 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833453.1 2693473 D 395963 CDS YP_001833454.1 182679308 6199708 2694003..2694182 1 NC_010581.1 hypothetical protein 2694182 6199708 Bind_2353 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833454.1 2694003 D 395963 CDS YP_001833455.1 182679309 6199201 complement(2694598..2695068) 1 NC_010581.1 hypothetical protein 2695068 6199201 Bind_2354 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833455.1 2694598 R 395963 CDS YP_001833456.1 182679310 6200471 2695403..2696008 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: acr:Acry_3101 transcriptional regulator, TetR family; TetR family transcriptional regulator 2696008 6200471 Bind_2355 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833456.1 2695403 D 395963 CDS YP_001833457.1 182679311 6199870 2696005..2696700 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: mag:amb2655 glutathione S-transferase; glutathione S-transferase domain-containing protein 2696700 6199870 Bind_2356 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001833457.1 2696005 D 395963 CDS YP_001833458.1 182679312 6201361 2696697..2697413 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: acr:Acry_3099 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 2697413 6201361 Bind_2357 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001833458.1 2696697 D 395963 CDS YP_001833459.1 182679313 6199659 2697558..2697830 1 NC_010581.1 hypothetical protein 2697830 6199659 Bind_2358 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833459.1 2697558 D 395963 CDS YP_001833460.1 182679314 6198602 complement(2697872..2699170) 1 NC_010581.1 KEGG: dra:DR_1169 hypothetical protein; hypothetical protein 2699170 6198602 Bind_2359 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833460.1 2697872 R 395963 CDS YP_001833461.1 182679315 6199484 complement(2699178..2700257) 1 NC_010581.1 KEGG: pca:Pcar_0522 ATPase, AAA superfamily; hypothetical protein 2700257 6199484 Bind_2360 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833461.1 2699178 R 395963 CDS YP_001833462.1 182679316 6198868 complement(2700290..2700745) 1 NC_010581.1 hypothetical protein 2700745 6198868 Bind_2361 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833462.1 2700290 R 395963 CDS YP_001833463.1 182679317 6199110 2701085..2701282 1 NC_010581.1 KEGG: azc:AZC_1023 hypothetical protein; hypothetical protein 2701282 6199110 Bind_2362 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833463.1 2701085 D 395963 CDS YP_001833464.1 182679318 6198631 2701263..2702786 1 NC_010581.1 PFAM: Na+/solute symporter; KEGG: bja:bll5890 monocarboxylic acid permease; Na+/solute symporter 2702786 6198631 Bind_2363 Beijerinckia indica subsp. indica ATCC 9039 Na+/solute symporter YP_001833464.1 2701263 D 395963 CDS YP_001833465.1 182679319 6199239 complement(2702935..2703480) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02834 probable acetyltransferase protein; N-acetyltransferase GCN5 2703480 6199239 Bind_2364 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001833465.1 2702935 R 395963 CDS YP_001833466.1 182679320 6199234 complement(2703732..2704706) 1 NC_010581.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3302 putative aliphatic sulfonates-binding protein precursor (SsuA protein); aliphatic sulfonate ABC transporter substrate-binding protein 2704706 6199234 Bind_2365 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001833466.1 2703732 R 395963 CDS YP_001833467.1 182679321 6199675 complement(2706084..2706512) 1 NC_010581.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bja:blr0943 hypothetical protein; glutathione-dependent formaldehyde-activating protein 2706512 6199675 Bind_2367 Beijerinckia indica subsp. indica ATCC 9039 glutathione-dependent formaldehyde-activating protein YP_001833467.1 2706084 R 395963 CDS YP_001833468.1 182679322 6201169 complement(2706704..2708638) 1 NC_010581.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2708638 thrS 6201169 thrS Beijerinckia indica subsp. indica ATCC 9039 threonyl-tRNA synthetase YP_001833468.1 2706704 R 395963 CDS YP_001833469.1 182679323 6201050 complement(2708798..2709004) 1 NC_010581.1 hypothetical protein 2709004 6201050 Bind_2369 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833469.1 2708798 R 395963 CDS YP_001833470.1 182679324 6198806 2709134..2710678 1 NC_010581.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: cak:Caul_4624 adenylate cyclase; adenylate cyclase 2710678 6198806 Bind_2370 Beijerinckia indica subsp. indica ATCC 9039 adenylate cyclase YP_001833470.1 2709134 D 395963 CDS YP_001833471.1 182679325 6199177 2710909..2711244 1 NC_010581.1 KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein 2711244 6199177 Bind_2371 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833471.1 2710909 D 395963 CDS YP_001833472.1 182679326 6200212 2711584..2711814 1 NC_010581.1 hypothetical protein 2711814 6200212 Bind_2372 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833472.1 2711584 D 395963 CDS YP_001833473.1 182679327 6200337 2712034..2712447 1 NC_010581.1 KEGG: nwi:Nwi_0593 hypothetical protein; hypothetical protein 2712447 6200337 Bind_2373 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833473.1 2712034 D 395963 CDS YP_001833474.1 182679328 6200901 complement(2712702..2712941) 1 NC_010581.1 hypothetical protein 2712941 6200901 Bind_2374 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833474.1 2712702 R 395963 CDS YP_001833475.1 182679329 6198715 2713045..2714514 1 NC_010581.1 KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 2714514 6198715 Bind_2375 Beijerinckia indica subsp. indica ATCC 9039 sugar transporter YP_001833475.1 2713045 D 395963 CDS YP_001833476.1 182679330 6199487 2714654..2716240 1 NC_010581.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: azc:AZC_2390 pseudouridine synthase; RNA-binding S4 domain-containing protein 2716240 6199487 Bind_2376 Beijerinckia indica subsp. indica ATCC 9039 RNA-binding S4 domain-containing protein YP_001833476.1 2714654 D 395963 CDS YP_001833477.1 182679331 6199902 2716363..2717376 1 NC_010581.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pnu:Pnuc_1328 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2717376 6199902 Bind_2377 Beijerinckia indica subsp. indica ATCC 9039 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001833477.1 2716363 D 395963 CDS YP_001833478.1 182679332 6200565 2717467..2718039 1 NC_010581.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: xau:Xaut_3093 putative methyltransferase; methyltransferase 2718039 6200565 Bind_2378 Beijerinckia indica subsp. indica ATCC 9039 methyltransferase YP_001833478.1 2717467 D 395963 CDS YP_001833479.1 182679333 6199152 2718203..2718523 1 NC_010581.1 KEGG: bra:BRADO1847 hypothetical protein; hypothetical protein 2718523 6199152 Bind_2379 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833479.1 2718203 D 395963 CDS YP_001833480.1 182679334 6201355 complement(2718592..2720940) 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bra:BRADO4157 putative TonB dependent receptor; TonB-dependent receptor 2720940 6201355 Bind_2380 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833480.1 2718592 R 395963 CDS YP_001833481.1 182679335 6201681 complement(2721073..2721426) 1 NC_010581.1 KEGG: rpb:RPB_3553 hypothetical protein; hypothetical protein 2721426 6201681 Bind_2381 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833481.1 2721073 R 395963 CDS YP_001833482.1 182679336 6200559 complement(2721601..2722218) 1 NC_010581.1 PFAM: electron transport protein SCO1/SenC; KEGG: mes:Meso_1992 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2722218 6200559 Bind_2382 Beijerinckia indica subsp. indica ATCC 9039 electron transport protein SCO1/SenC YP_001833482.1 2721601 R 395963 CDS YP_001833483.1 182679337 6199123 complement(2722330..2724000) 1 NC_010581.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain protein; beta-lactamase domain-containing protein 2724000 6199123 Bind_2383 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001833483.1 2722330 R 395963 CDS YP_001833484.1 182679338 6199889 complement(2724153..2724947) 1 NC_010581.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mes:Meso_1036 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 2724947 6199889 Bind_2384 Beijerinckia indica subsp. indica ATCC 9039 biotin--acetyl-CoA-carboxylase ligase YP_001833484.1 2724153 R 395963 CDS YP_001833485.1 182679339 6201143 complement(2725011..2726444) 1 NC_010581.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bra:BRADO4171 NADH dehydrogenase subunit N; proton-translocating NADH-quinone oxidoreductase subunit N 2726444 6201143 Bind_2385 Beijerinckia indica subsp. indica ATCC 9039 proton-translocating NADH-quinone oxidoreductase subunit N YP_001833485.1 2725011 R 395963 CDS YP_001833486.1 182679340 6199627 complement(2726557..2728080) 1 NC_010581.1 KEGG: xau:Xaut_4621 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2728080 6199627 Bind_2386 Beijerinckia indica subsp. indica ATCC 9039 proton-translocating NADH-quinone oxidoreductase subunit M YP_001833486.1 2726557 R 395963 CDS YP_001833487.1 182679341 6199698 complement(2728080..2730080) 1 NC_010581.1 KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 2730080 6199698 Bind_2387 Beijerinckia indica subsp. indica ATCC 9039 proton-translocating NADH-quinone oxidoreductase subunit L YP_001833487.1 2728080 R 395963 CDS YP_001833488.1 182679342 6200090 complement(2730088..2730396) 1 NC_010581.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: smd:Smed_0900 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L 2730396 6200090 Bind_2388 Beijerinckia indica subsp. indica ATCC 9039 NADH-ubiquinone oxidoreductase chain 4L YP_001833488.1 2730088 R 395963 CDS YP_001833489.1 182679343 6199554 complement(2730422..2731030) 1 NC_010581.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 2731030 6199554 Bind_2389 Beijerinckia indica subsp. indica ATCC 9039 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001833489.1 2730422 R 395963 CDS YP_001833490.1 182679344 6199402 complement(2731041..2731529) 1 NC_010581.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2731529 6199402 Bind_2390 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase subunit I YP_001833490.1 2731041 R 395963 CDS YP_001833491.1 182679345 6200871 complement(2731596..2732624) 1 NC_010581.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2732624 6200871 Bind_2391 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase subunit H YP_001833491.1 2731596 R 395963 CDS YP_001833492.1 182679346 6200163 complement(2732648..2734708) 1 NC_010581.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2734708 6200163 Bind_2392 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase subunit G YP_001833492.1 2732648 R 395963 CDS YP_001833493.1 182679347 6199021 complement(2734788..2735120) 1 NC_010581.1 KEGG: rpc:RPC_2139 hypothetical protein; hypothetical protein 2735120 6199021 Bind_2393 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833493.1 2734788 R 395963 CDS YP_001833494.1 182679348 6201813 complement(2735126..2736436) 1 NC_010581.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 2736436 6201813 Bind_2394 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase I subunit F YP_001833494.1 2735126 R 395963 CDS YP_001833495.1 182679349 6201756 complement(2736451..2737119) 1 NC_010581.1 KEGG: xau:Xaut_4629 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 2737119 6201756 Bind_2395 Beijerinckia indica subsp. indica ATCC 9039 NADH-quinone oxidoreductase subunit E YP_001833495.1 2736451 R 395963 CDS YP_001833496.1 182679350 6200274 complement(2737160..2738350) 1 NC_010581.1 KEGG: xau:Xaut_4630 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 2738350 6200274 Bind_2396 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase I subunit D YP_001833496.1 2737160 R 395963 CDS YP_001833497.1 182679351 6201370 complement(2738401..2739039) 1 NC_010581.1 KEGG: xau:Xaut_4631 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 2739039 6201370 Bind_2397 Beijerinckia indica subsp. indica ATCC 9039 NADH (or F420H2) dehydrogenase subunit C YP_001833497.1 2738401 R 395963 CDS YP_001833498.1 182679352 6200103 complement(2739099..2739641) 1 NC_010581.1 KEGG: mex:Mext_1084 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 2739641 6200103 Bind_2398 Beijerinckia indica subsp. indica ATCC 9039 NADH-quinone oxidoreductase subunit B YP_001833498.1 2739099 R 395963 CDS YP_001833499.1 182679353 6199821 complement(2739632..2739997) 1 NC_010581.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mex:Mext_1085 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 2739997 6199821 Bind_2399 Beijerinckia indica subsp. indica ATCC 9039 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001833499.1 2739632 R 395963 CDS YP_001833500.1 182679354 6199398 complement(2741103..2741750) 1 NC_010581.1 KEGG: bbt:BBta_5203 hypothetical protein; periplasmic protein-like protein 2741750 6199398 Bind_2400 Beijerinckia indica subsp. indica ATCC 9039 periplasmic protein-like protein YP_001833500.1 2741103 R 395963 CDS YP_001833501.1 182679355 6200182 complement(2742283..2742597) 1 NC_010581.1 KEGG: bra:BRADO5430 hypothetical protein; hypothetical protein 2742597 6200182 Bind_2401 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833501.1 2742283 R 395963 CDS YP_001833502.1 182679356 6200883 complement(2742723..2743226) 1 NC_010581.1 KEGG: bra:BRADO5401 conserved hypothetical protein (TPR repeat); hypothetical protein 2743226 6200883 Bind_2402 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833502.1 2742723 R 395963 CDS YP_001833503.1 182679357 6200458 2743478..2744509 1 NC_010581.1 KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 2744509 6200458 Bind_2403 Beijerinckia indica subsp. indica ATCC 9039 recA protein YP_001833503.1 2743478 D 395963 CDS YP_001833504.1 182679358 6201185 2745057..2746046 1 NC_010581.1 KEGG: mex:Mext_0531 hypothetical protein; hypothetical protein 2746046 6201185 Bind_2404 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833504.1 2745057 D 395963 CDS YP_001833505.1 182679359 6199545 2746302..2749007 1 NC_010581.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2749007 alaS 6199545 alaS Beijerinckia indica subsp. indica ATCC 9039 alanyl-tRNA synthetase YP_001833505.1 2746302 D 395963 CDS YP_001833506.1 182679360 6200550 2749194..2749373 1 NC_010581.1 PFAM: protein of unknown function DUF1328; KEGG: mes:Meso_3110 protein of unknown function DUF1328; hypothetical protein 2749373 6200550 Bind_2406 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833506.1 2749194 D 395963 CDS YP_001833507.1 182679361 6200429 2749680..2750084 1 NC_010581.1 KEGG: azc:AZC_1593 hypothetical protein; hypothetical protein 2750084 6200429 Bind_2407 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833507.1 2749680 D 395963 CDS YP_001833508.1 182679362 6200556 2750295..2750810 1 NC_010581.1 PFAM: Phosphoglycerate mutase; KEGG: azc:AZC_1661 phosphohistidine phosphatase; putative phosphohistidine phosphatase SixA 2750810 6200556 Bind_2408 Beijerinckia indica subsp. indica ATCC 9039 putative phosphohistidine phosphatase SixA YP_001833508.1 2750295 D 395963 CDS YP_001833509.1 182679363 6201198 2750951..2752102 1 NC_010581.1 KEGG: mex:Mext_4626 hypothetical protein; hypothetical protein 2752102 6201198 Bind_2409 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833509.1 2750951 D 395963 CDS YP_001833510.1 182679364 6201478 2752226..2753707 1 NC_010581.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rpc:RPC_4270 protein of unknown function DUF463, YcjX-like protein; hypothetical protein 2753707 6201478 Bind_2410 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833510.1 2752226 D 395963 CDS YP_001833511.1 182679365 6200431 2753707..2754798 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: mes:Meso_1416 conserved hypothetical protein 1620; hypothetical protein 2754798 6200431 Bind_2411 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833511.1 2753707 D 395963 CDS YP_001833512.1 182679366 6200222 complement(2756047..2756436) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3072 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 2756436 6200222 Bind_2413 Beijerinckia indica subsp. indica ATCC 9039 helix-turn-helix domain-containing protein YP_001833512.1 2756047 R 395963 CDS YP_001833513.1 182679367 6201033 complement(2756438..2756689) 1 NC_010581.1 KEGG: rpc:RPC_3073 plasmid stabilization system; plasmid stabilization system protein 2756689 6201033 Bind_2414 Beijerinckia indica subsp. indica ATCC 9039 plasmid stabilization system protein YP_001833513.1 2756438 R 395963 CDS YP_001833514.1 182679368 6199995 complement(2756777..2757763) 1 NC_010581.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dac:Daci_3048 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 2757763 6199995 Bind_2415 Beijerinckia indica subsp. indica ATCC 9039 Mg2 transporter protein CorA family protein YP_001833514.1 2756777 R 395963 CDS YP_001833515.1 182679369 6200782 complement(2758065..2758640) 1 NC_010581.1 KEGG: rpe:RPE_3533 hypothetical protein; hypothetical protein 2758640 6200782 Bind_2416 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833515.1 2758065 R 395963 CDS YP_001833516.1 182679370 6199835 complement(2759397..2760416) 1 NC_010581.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2760416 6199835 Bind_2418 Beijerinckia indica subsp. indica ATCC 9039 ketol-acid reductoisomerase YP_001833516.1 2759397 R 395963 CDS YP_001833517.1 182679371 6200313 complement(2760553..2761107) 1 NC_010581.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rpe:RPE_2189 acetolactate synthase, small subunit; acetolactate synthase small subunit 2761107 6200313 Bind_2419 Beijerinckia indica subsp. indica ATCC 9039 acetolactate synthase small subunit YP_001833517.1 2760553 R 395963 CDS YP_001833518.1 182679372 6199548 complement(2761107..2762867) 1 NC_010581.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 2762867 6199548 Bind_2420 Beijerinckia indica subsp. indica ATCC 9039 acetolactate synthase large subunit YP_001833518.1 2761107 R 395963 CDS YP_001833519.1 182679373 6201526 complement(2764292..2764744) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: btr:Btr_0553 hypothetical protein; XRE family transcriptional regulator 2764744 6201526 Bind_2421 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001833519.1 2764292 R 395963 CDS YP_001833520.1 182679374 6201729 2765385..2765693 1 NC_010581.1 hypothetical protein 2765693 6201729 Bind_2422 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833520.1 2765385 D 395963 CDS YP_001833521.1 182679375 6200981 2765697..2766188 1 NC_010581.1 KEGG: oan:Oant_1534 hypothetical protein; hypothetical protein 2766188 6200981 Bind_2423 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833521.1 2765697 D 395963 CDS YP_001833522.1 182679376 6200034 2766370..2767020 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: amr:AM1_1199 thiopurine S-methyltransferase, putative; type 11 methyltransferase 2767020 6200034 Bind_2424 Beijerinckia indica subsp. indica ATCC 9039 type 11 methyltransferase YP_001833522.1 2766370 D 395963 CDS YP_001833523.1 182679377 6199272 2767027..2767500 1 NC_010581.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc00385 hypothetical protein; ybaK/ebsC protein 2767500 6199272 Bind_2425 Beijerinckia indica subsp. indica ATCC 9039 ybaK/ebsC protein YP_001833523.1 2767027 D 395963 CDS YP_001833524.1 182679378 6201527 complement(2767510..2767968) 1 NC_010581.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR 2767968 6201527 Bind_2426 Beijerinckia indica subsp. indica ATCC 9039 manganese transport regulator MntR YP_001833524.1 2767510 R 395963 CDS YP_001833525.1 182679379 6200309 2768304..2769656 1 NC_010581.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: nwi:Nwi_1912 putative manganese transport protein MntH; manganese transport protein MntH 2769656 6200309 Bind_2427 Beijerinckia indica subsp. indica ATCC 9039 manganese transport protein MntH YP_001833525.1 2768304 D 395963 CDS YP_001833526.1 182679380 6199124 complement(2769715..2771592) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_4267 ABC transporter related; ABC transporter-like protein 2771592 6199124 Bind_2428 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833526.1 2769715 R 395963 CDS YP_001833527.1 182679381 6199810 complement(2771749..2773260) 1 NC_010581.1 KEGG: gox:GOX0651 hypothetical protein; hypothetical protein 2773260 6199810 Bind_2429 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833527.1 2771749 R 395963 CDS YP_001833528.1 182679382 6200002 2773787..2774341 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bcs:BCAN_B0712 thioredoxin peroxidase 2; alkyl hydroperoxide reductase 2774341 6200002 Bind_2430 Beijerinckia indica subsp. indica ATCC 9039 alkyl hydroperoxide reductase YP_001833528.1 2773787 D 395963 CDS YP_001833529.1 182679383 6200126 2774468..2775010 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpe:RPE_4514 alkylhydroperoxidase, AhpD family; alkylhydroperoxidase 2775010 6200126 Bind_2431 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001833529.1 2774468 D 395963 CDS YP_001833530.1 182679384 6201117 complement(2775084..2776046) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xfa:XF1532 oxidative stress transcriptional regulator; LysR family transcriptional regulator 2776046 6201117 Bind_2432 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833530.1 2775084 R 395963 CDS YP_001833531.1 182679385 6199118 2776167..2776589 1 NC_010581.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2776589 ndk 6199118 ndk Beijerinckia indica subsp. indica ATCC 9039 nucleoside diphosphate kinase YP_001833531.1 2776167 D 395963 CDS YP_001833532.1 182679386 6201247 2776609..2777415 1 NC_010581.1 PFAM: inositol monophosphatase; KEGG: saq:Sare_0440 inositol monophosphatase; inositol monophosphatase 2777415 6201247 Bind_2434 Beijerinckia indica subsp. indica ATCC 9039 inositol monophosphatase YP_001833532.1 2776609 D 395963 CDS YP_001833533.1 182679387 6199240 2777501..2778796 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_4766 major facilitator superfamily MFS_1; major facilitator transporter 2778796 6199240 Bind_2435 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833533.1 2777501 D 395963 CDS YP_001833534.1 182679388 6200027 complement(2778793..2779626) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_3195 ABC transporter related; ABC transporter-like protein 2779626 6200027 Bind_2436 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833534.1 2778793 R 395963 CDS YP_001833535.1 182679389 6200769 complement(2779630..2780466) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpe:RPE_3194 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2780466 6200769 Bind_2437 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833535.1 2779630 R 395963 CDS YP_001833536.1 182679390 6199490 complement(2780522..2781490) 1 NC_010581.1 KEGG: rpe:RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 2781490 6199490 Bind_2438 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001833536.1 2780522 R 395963 CDS YP_001833537.1 182679391 6200576 2781885..2782322 1 NC_010581.1 PFAM: CBS domain containing protein; KEGG: mes:Meso_2788 CBS domain containing protein; hypothetical protein 2782322 6200576 Bind_2439 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833537.1 2781885 D 395963 CDS YP_001833538.1 182679392 6200908 complement(2782446..2783396) 1 NC_010581.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era; GTP-binding protein Era 2783396 6200908 Bind_2440 Beijerinckia indica subsp. indica ATCC 9039 GTP-binding protein Era YP_001833538.1 2782446 R 395963 CDS YP_001833539.1 182679393 6199543 complement(2783393..2784100) 1 NC_010581.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: xau:Xaut_3881 ribonuclease III; ribonuclease III 2784100 6199543 Bind_2441 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease III YP_001833539.1 2783393 R 395963 CDS YP_001833540.1 182679394 6199274 complement(2784101..2784907) 1 NC_010581.1 KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 2784907 6199274 Bind_2442 Beijerinckia indica subsp. indica ATCC 9039 signal peptidase I YP_001833540.1 2784101 R 395963 CDS YP_001833541.1 182679395 6199669 complement(2785088..2785510) 1 NC_010581.1 KEGG: sme:SMc02654 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase 2785510 6199669 Bind_2443 Beijerinckia indica subsp. indica ATCC 9039 holo-acyl-carrier-protein synthase YP_001833541.1 2785088 R 395963 CDS YP_001833542.1 182679396 6200358 complement(2785516..2786298) 1 NC_010581.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2786298 6200358 Bind_2444 Beijerinckia indica subsp. indica ATCC 9039 pyridoxine 5'-phosphate synthase YP_001833542.1 2785516 R 395963 CDS YP_001833543.1 182679397 6199537 complement(2786298..2788511) 1 NC_010581.1 KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 2788511 6199537 Bind_2445 Beijerinckia indica subsp. indica ATCC 9039 (p)ppGpp synthetase I SpoT/RelA YP_001833543.1 2786298 R 395963 CDS YP_001833544.1 182679398 6200364 complement(2788618..2789013) 1 NC_010581.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2789013 6200364 Bind_2446 Beijerinckia indica subsp. indica ATCC 9039 DNA-directed RNA polymerase subunit omega YP_001833544.1 2788618 R 395963 CDS YP_001833545.1 182679399 6200359 2789683..2790294 1 NC_010581.1 PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 protein of unknown function DUF88; hypothetical protein 2790294 6200359 Bind_2447 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833545.1 2789683 D 395963 CDS YP_001833546.1 182679400 6199971 2790354..2791064 1 NC_010581.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: nha:Nham_2258 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 2791064 6199971 Bind_2448 Beijerinckia indica subsp. indica ATCC 9039 uracil-DNA glycosylase superfamily protein YP_001833546.1 2790354 D 395963 CDS YP_001833547.1 182679401 6200031 complement(2791097..2794288) 1 NC_010581.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2794288 6200031 Bind_2449 Beijerinckia indica subsp. indica ATCC 9039 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001833547.1 2791097 R 395963 CDS YP_001833548.1 182679402 6199703 complement(2794293..2795414) 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll5081 putative multidrug resistance protein; RND family efflux transporter MFP subunit 2795414 6199703 Bind_2450 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833548.1 2794293 R 395963 CDS YP_001833549.1 182679403 6201183 2796143..2796619 1 NC_010581.1 KEGG: nha:Nham_0878 hypothetical protein; hypothetical protein 2796619 6201183 Bind_2451 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833549.1 2796143 D 395963 CDS YP_001833550.1 182679404 6198905 2796740..2798980 1 NC_010581.1 KEGG: bja:blr3456 hypothetical protein; hypothetical protein 2798980 6198905 Bind_2452 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833550.1 2796740 D 395963 CDS YP_001833551.1 182679405 6200502 2799039..2800016 1 NC_010581.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: bch:Bcen2424_4872 phosphate acetyltransferase; phosphate acetyltransferase 2800016 6200502 Bind_2453 Beijerinckia indica subsp. indica ATCC 9039 phosphate acetyltransferase YP_001833551.1 2799039 D 395963 CDS YP_001833552.1 182679406 6201184 2800239..2801483 1 NC_010581.1 PFAM: peptidase M48 Ste24p; KEGG: mfa:Mfla_1474 STE24 endopeptidase; Ste24 endopeptidase 2801483 6201184 Bind_2454 Beijerinckia indica subsp. indica ATCC 9039 Ste24 endopeptidase YP_001833552.1 2800239 D 395963 CDS YP_001833553.1 182679407 6199706 complement(2801562..2802383) 1 NC_010581.1 PFAM: NLPA lipoprotein; KEGG: bmu:Bmul_3391 NlpA lipoprotein; NLPA lipoprotein 2802383 6199706 Bind_2455 Beijerinckia indica subsp. indica ATCC 9039 NLPA lipoprotein YP_001833553.1 2801562 R 395963 CDS YP_001833554.1 182679408 6200067 complement(2802442..2803104) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3692 putative ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2803104 6200067 Bind_2456 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833554.1 2802442 R 395963 CDS YP_001833555.1 182679409 6200948 complement(2803094..2804200) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3691 ABC transporter ATP-binding protein; ABC transporter-like protein 2804200 6200948 Bind_2457 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833555.1 2803094 R 395963 CDS YP_001833556.1 182679410 6200837 2804534..2806327 1 NC_010581.1 hypothetical protein 2806327 6200837 Bind_2458 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833556.1 2804534 D 395963 CDS YP_001833557.1 182679411 6201699 complement(2806410..2808179) 1 NC_010581.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH); mannitol dehydrogenase domain-containing protein 2808179 6201699 Bind_2459 Beijerinckia indica subsp. indica ATCC 9039 mannitol dehydrogenase domain-containing protein YP_001833557.1 2806410 R 395963 CDS YP_001833558.1 182679412 6201373 complement(2808487..2809497) 1 NC_010581.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_L_3278 ATP-binding transport protein SmoK (POLK); ABC transporter-like protein 2809497 6201373 Bind_2460 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833558.1 2808487 R 395963 CDS YP_001833559.1 182679413 6200898 complement(2809509..2810339) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4216 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 2810339 6200898 Bind_2461 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833559.1 2809509 R 395963 CDS YP_001833560.1 182679414 6201479 complement(2810343..2811215) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4217 putative mannitol transmembrane permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 2811215 6201479 Bind_2462 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833560.1 2810343 R 395963 CDS YP_001833561.1 182679415 6200978 complement(2811502..2812815) 1 NC_010581.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:RL4218 putative mannitol-binding component of ABC transporter; extracellular solute-binding protein 2812815 6200978 Bind_2463 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001833561.1 2811502 R 395963 CDS YP_001833562.1 182679416 6200896 2813026..2814480 1 NC_010581.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_CH03649 xylulokinase protein; xylulokinase 2814480 6200896 Bind_2464 Beijerinckia indica subsp. indica ATCC 9039 xylulokinase YP_001833562.1 2813026 D 395963 CDS YP_001833563.1 182679417 6199966 2814611..2815174 1 NC_010581.1 PFAM: AIG2 family protein; KEGG: cyb:CYB_1529 hypothetical protein; AIG2 family protein 2815174 6199966 Bind_2465 Beijerinckia indica subsp. indica ATCC 9039 AIG2 family protein YP_001833563.1 2814611 D 395963 CDS YP_001833564.1 182679418 6199539 2815258..2815539 1 NC_010581.1 TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: ret:RHE_CH00244 hypothetical protein; putative selenoprotein 2815539 6199539 Bind_2466 Beijerinckia indica subsp. indica ATCC 9039 putative selenoprotein YP_001833564.1 2815258 D 395963 CDS YP_001833565.1 182679419 6199899 complement(2816094..2816687) 1 NC_010581.1 hypothetical protein 2816687 6199899 Bind_2467 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833565.1 2816094 R 395963 CDS YP_001833566.1 182679420 6199199 complement(2817621..2818562) 1 NC_010581.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: cak:Caul_2635 transglutaminase domain protein; transglutaminase domain-containing protein 2818562 6199199 Bind_2469 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase domain-containing protein YP_001833566.1 2817621 R 395963 CDS YP_001833567.1 182679421 6200921 2818991..2822359 1 NC_010581.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3754 transglutaminase-like domain; transglutaminase domain-containing protein 2822359 6200921 Bind_2470 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase domain-containing protein YP_001833567.1 2818991 D 395963 CDS YP_001833568.1 182679422 6199500 complement(2822467..2823372) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_1679 transcriptional regulator, LysR family; LysR family transcriptional regulator 2823372 6199500 Bind_2471 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833568.1 2822467 R 395963 CDS YP_001833569.1 182679423 6199198 2823528..2824787 1 NC_010581.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:Pfl_1664 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2824787 6199198 Bind_2472 Beijerinckia indica subsp. indica ATCC 9039 C4-dicarboxylate transporter/malic acid transport protein YP_001833569.1 2823528 D 395963 CDS YP_001833570.1 182679424 6199580 2825069..2825380 1 NC_010581.1 SMART: helix-turn-helix domain protein; KEGG: bja:bll6346 hypothetical protein; helix-turn-helix domain-containing protein 2825380 6199580 Bind_2473 Beijerinckia indica subsp. indica ATCC 9039 helix-turn-helix domain-containing protein YP_001833570.1 2825069 D 395963 CDS YP_001833571.1 182679425 6199925 2825386..2827395 1 NC_010581.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rle:pRL110297 hydrogenase 4 subunit B; hydrogenase 4 subunit B 2827395 6199925 Bind_2474 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase 4 subunit B YP_001833571.1 2825386 D 395963 CDS YP_001833572.1 182679426 6200349 2827386..2828342 1 NC_010581.1 KEGG: azc:AZC_4359 NADH dehydrogenase; NADH dehydrogenase 2828342 6200349 Bind_2475 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase YP_001833572.1 2827386 D 395963 CDS YP_001833573.1 182679427 6200846 2828343..2829005 1 NC_010581.1 KEGG: bja:blr6341 hypothetical protein; hypothetical protein 2829005 6200846 Bind_2476 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833573.1 2828343 D 395963 CDS YP_001833574.1 182679428 6200114 2829002..2830447 1 NC_010581.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rle:pRL110294 hydrogenase 4 subunit F; hydrogenase 4 subunit F 2830447 6200114 Bind_2477 Beijerinckia indica subsp. indica ATCC 9039 hydrogenase 4 subunit F YP_001833574.1 2829002 D 395963 CDS YP_001833575.1 182679429 6199885 2830510..2831988 1 NC_010581.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rle:pRL110293 putative formate hydrogenlyase subunit 5 precursor; NADH dehydrogenase (quinone) 2831988 6199885 Bind_2478 Beijerinckia indica subsp. indica ATCC 9039 NADH dehydrogenase (quinone) YP_001833575.1 2830510 D 395963 CDS YP_001833576.1 182679430 6201368 2832000..2832533 1 NC_010581.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: xau:Xaut_0171 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2832533 6201368 Bind_2479 Beijerinckia indica subsp. indica ATCC 9039 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001833576.1 2832000 D 395963 CDS YP_001833577.1 182679431 6198413 2832632..2833696 1 NC_010581.1 PFAM: integrase family protein; KEGG: xau:Xaut_4792 integrase family protein; integrase family protein 2833696 6198413 Bind_2480 Beijerinckia indica subsp. indica ATCC 9039 integrase family protein YP_001833577.1 2832632 D 395963 CDS YP_001833578.1 182679432 6201171 complement(2833752..2834765) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: oan:Oant_0293 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 2834765 6201171 Bind_2481 Beijerinckia indica subsp. indica ATCC 9039 LacI family transcriptional regulator YP_001833578.1 2833752 R 395963 CDS YP_001833579.1 182679433 6201156 2834934..2835983 1 NC_010581.1 PFAM: PfkB domain protein; KEGG: oan:Oant_0289 PfkB domain protein; ribokinase-like domain-containing protein 2835983 6201156 Bind_2482 Beijerinckia indica subsp. indica ATCC 9039 ribokinase-like domain-containing protein YP_001833579.1 2834934 D 395963 CDS YP_001833580.1 182679434 6201087 2835938..2836810 1 NC_010581.1 PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: oan:Oant_0288 tagatose-6-phosphate kinase; tagatose-6-phosphate kinase 2836810 6201087 Bind_2483 Beijerinckia indica subsp. indica ATCC 9039 tagatose-6-phosphate kinase YP_001833580.1 2835938 D 395963 CDS YP_001833581.1 182679435 6199638 2836807..2837508 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO3430 putative haloacid dehalogenase-like hydrolase family protein; HAD family hydrolase 2837508 6199638 Bind_2484 Beijerinckia indica subsp. indica ATCC 9039 HAD family hydrolase YP_001833581.1 2836807 D 395963 CDS YP_001833582.1 182679436 6200085 2838321..2839850 1 NC_010581.1 KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 2839850 6200085 Bind_2486 Beijerinckia indica subsp. indica ATCC 9039 sugar transporter YP_001833582.1 2838321 D 395963 CDS YP_001833583.1 182679437 6200972 complement(2840040..2840897) 1 NC_010581.1 KEGG: ret:RHE_CH02644 hypothetical protein; hypothetical protein 2840897 6200972 Bind_2487 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833583.1 2840040 R 395963 CDS YP_001833584.1 182679438 6199572 complement(2840894..2842099) 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ret:RHE_CH02643 ferredoxin reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2842099 6199572 Bind_2488 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001833584.1 2840894 R 395963 CDS YP_001833585.1 182679439 6201018 complement(2842124..2843068) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH02642 rhizopine ABC transporter, substrate-binding protein; periplasmic binding protein/LacI transcriptional regulator 2843068 6201018 Bind_2489 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833585.1 2842124 R 395963 CDS YP_001833586.1 182679440 6200024 complement(2843247..2843558) 1 NC_010581.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMa2053 MocE-like protein; Rieske (2Fe-2S) domain-containing protein 2843558 6200024 Bind_2490 Beijerinckia indica subsp. indica ATCC 9039 Rieske (2Fe-2S) domain-containing protein YP_001833586.1 2843247 R 395963 CDS YP_001833587.1 182679441 6199571 complement(2843555..2844589) 1 NC_010581.1 PFAM: fatty acid hydroxylase; KEGG: ret:RHE_CH02640 probable desaturase protein; fatty acid hydroxylase 2844589 6199571 Bind_2491 Beijerinckia indica subsp. indica ATCC 9039 fatty acid hydroxylase YP_001833587.1 2843555 R 395963 CDS YP_001833588.1 182679442 6200780 complement(2844765..2845766) 1 NC_010581.1 PFAM: regulatory protein LacI; KEGG: sme:SMa2049 putative LacI-family transcription regulator; LacI family transcriptional regulator 2845766 6200780 Bind_2492 Beijerinckia indica subsp. indica ATCC 9039 LacI family transcriptional regulator YP_001833588.1 2844765 R 395963 CDS YP_001833589.1 182679443 6201237 complement(2845881..2846831) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5967 putative transcriptional regulatory protein AraC/XylS family; AraC family transcriptional regulator 2846831 6201237 Bind_2493 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833589.1 2845881 R 395963 CDS YP_001833590.1 182679444 6199804 2846998..2847381 1 NC_010581.1 KEGG: pha:PSHAb0115 putative enzyme protein; hypothetical protein 2847381 6199804 Bind_2494 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833590.1 2846998 D 395963 CDS YP_001833591.1 182679445 6199881 2847395..2848504 1 NC_010581.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gvi:glr4425 glutathione dependent formaldehyde dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2848504 6199881 Bind_2495 Beijerinckia indica subsp. indica ATCC 9039 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_001833591.1 2847395 D 395963 CDS YP_001833592.1 182679446 6199752 2848504..2849346 1 NC_010581.1 KEGG: bmu:Bmul_0694 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 2849346 6199752 Bind_2496 Beijerinckia indica subsp. indica ATCC 9039 S-formylglutathione hydrolase YP_001833592.1 2848504 D 395963 CDS YP_001833593.1 182679447 6200758 2849576..2849848 1 NC_010581.1 KEGG: bbt:BBta_4248 hypothetical protein; hypothetical protein 2849848 6200758 Bind_2497 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833593.1 2849576 D 395963 CDS YP_001833594.1 182679448 6201196 2850200..2850742 1 NC_010581.1 KEGG: pde:Pden_1062 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 2850742 6201196 Bind_2498 Beijerinckia indica subsp. indica ATCC 9039 flavin reductase domain-containing protein YP_001833594.1 2850200 D 395963 CDS YP_001833595.1 182679449 6199584 2850913..2851749 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gox:GOX2105 transcriptional regulator; LysR family transcriptional regulator 2851749 6199584 Bind_2499 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833595.1 2850913 D 395963 CDS YP_001833596.1 182679450 6200202 2851891..2853624 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: gox:GOX2104 putative transport protein; major facilitator transporter 2853624 6200202 Bind_2500 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833596.1 2851891 D 395963 CDS YP_001833597.1 182679451 6200891 2853637..2854713 1 NC_010581.1 PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0236 putative secretion protein, HlyD-family; secretion protein HlyD family protein 2854713 6200891 Bind_2501 Beijerinckia indica subsp. indica ATCC 9039 secretion protein HlyD family protein YP_001833597.1 2853637 D 395963 CDS YP_001833598.1 182679452 6201363 2854700..2856301 1 NC_010581.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0997 putative outer membrane protein OprJ; RND efflux system outer membrane lipoprotein 2856301 6201363 Bind_2502 Beijerinckia indica subsp. indica ATCC 9039 RND efflux system outer membrane lipoprotein YP_001833598.1 2854700 D 395963 CDS YP_001833599.1 182679453 6200115 2856619..2857077 1 NC_010581.1 PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 2857077 6200115 Bind_2503 Beijerinckia indica subsp. indica ATCC 9039 PadR-like family transcriptional regulator YP_001833599.1 2856619 D 395963 CDS YP_001833600.1 182679454 6198940 complement(2857118..2858173) 1 NC_010581.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 2858173 6198940 Bind_2504 Beijerinckia indica subsp. indica ATCC 9039 RNA polymerase factor sigma-70 YP_001833600.1 2857118 R 395963 CDS YP_001833601.1 182679455 6200449 complement(2858186..2858935) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gvi:gll1228 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2858935 6200449 Bind_2505 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833601.1 2858186 R 395963 CDS YP_001833602.1 182679456 6199641 2859427..2860302 1 NC_010581.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 2860302 6199641 Bind_2506 Beijerinckia indica subsp. indica ATCC 9039 chaperone protein HchA YP_001833602.1 2859427 D 395963 CDS YP_001833603.1 182679457 6201037 2860299..2861018 1 NC_010581.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_2247 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2861018 6201037 Bind_2507 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001833603.1 2860299 D 395963 CDS YP_001833604.1 182679458 6200726 2861116..2861388 1 NC_010581.1 KEGG: reh:H16_B1343 short-chain dehydrogenase of various substrate specificities; short-chain dehydrogenase of various substrate specificities 2861388 6200726 Bind_2508 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase of various substrate specificities YP_001833604.1 2861116 D 395963 CDS YP_001833605.1 182679459 6199920 2862487..2864205 1 NC_010581.1 PFAM: Na+/Picotransporter; KEGG: sil:SPO0209 Na/Pi-cotransporter family protein; Na+/H+ antiporter 2864205 6199920 Bind_2510 Beijerinckia indica subsp. indica ATCC 9039 Na+/H+ antiporter YP_001833605.1 2862487 D 395963 CDS YP_001833606.1 182679460 6200946 2866986..2867516 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: ccr:CC_1036 hypothetical protein; hypothetical protein 2867516 6200946 Bind_2512 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833606.1 2866986 D 395963 CDS YP_001833607.1 182679461 6200106 complement(2867619..2868683) 1 NC_010581.1 KEGG: mpt:Mpe_A0156 hypothetical protein; hypothetical protein 2868683 6200106 Bind_2513 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833607.1 2867619 R 395963 CDS YP_001833608.1 182679462 6200803 2868929..2869504 1 NC_010581.1 KEGG: gdi:GDI0537 hypothetical protein; TetR family transcriptional regulator 2869504 6200803 Bind_2514 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833608.1 2868929 D 395963 CDS YP_001833609.1 182679463 6199996 complement(2871072..2872145) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: oih:OB3053 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 2872145 6199996 Bind_2516 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001833609.1 2871072 R 395963 CDS YP_001833610.1 182679464 6201354 complement(2875006..2875701) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_0960 iron (III) ABC transporter, ATP-binding protein; ABC transporter-like protein 2875701 6201354 Bind_2519 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833610.1 2875006 R 395963 CDS YP_001833611.1 182679465 6199947 complement(2875698..2877284) 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0959 iron (III) ABC transporter, permease; binding-protein-dependent transport system inner membrane protein 2877284 6199947 Bind_2520 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833611.1 2875698 R 395963 CDS YP_001833612.1 182679466 6199910 complement(2877287..2878309) 1 NC_010581.1 PFAM: extracellular solute-binding protein family 1; KEGG: sun:SUN_0958 iron (III) ABC transporter, substrate-binding protein; extracellular solute-binding protein 2878309 6199910 Bind_2521 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001833612.1 2877287 R 395963 CDS YP_001833613.1 182679467 6198808 complement(2878395..2878964) 1 NC_010581.1 KEGG: pol:Bpro_2501 hypothetical protein; hypothetical protein 2878964 6198808 Bind_2522 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833613.1 2878395 R 395963 CDS YP_001833614.1 182679468 6200363 complement(2879249..2880664) 1 NC_010581.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: sme:SMc00808 putative chromate transport protein; chromate transporter 2880664 6200363 Bind_2523 Beijerinckia indica subsp. indica ATCC 9039 chromate transporter YP_001833614.1 2879249 R 395963 CDS YP_001833615.1 182679469 6200848 complement(2880687..2881673) 1 NC_010581.1 KEGG: dvu:DVUA0094 ChrB protein; ChrB protein 2881673 6200848 Bind_2524 Beijerinckia indica subsp. indica ATCC 9039 ChrB protein YP_001833615.1 2880687 R 395963 CDS YP_001833616.1 182679470 6199499 2881827..2882297 1 NC_010581.1 KEGG: bch:Bcen2424_5953 hypothetical protein; hypothetical protein 2882297 6199499 Bind_2525 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833616.1 2881827 D 395963 CDS YP_001833617.1 182679471 6200895 2882320..2882595 1 NC_010581.1 KEGG: nha:Nham_1872 hypothetical protein; hypothetical protein 2882595 6200895 Bind_2526 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833617.1 2882320 D 395963 CDS YP_001833618.1 182679472 6199333 2882595..2883014 1 NC_010581.1 KEGG: rme:Rmet_6198 hypothetical protein; hypothetical protein 2883014 6199333 Bind_2527 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833618.1 2882595 D 395963 CDS YP_001833619.1 182679473 6198896 2883094..2883978 1 NC_010581.1 PFAM: protein of unknown function LppY and LpqO; KEGG: aba:Acid345_3442 protein of unknown function LppY and LpqO; hypothetical protein 2883978 6198896 Bind_2528 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833619.1 2883094 D 395963 CDS YP_001833620.1 182679474 6198892 2884096..2884689 1 NC_010581.1 PFAM: manganese and iron superoxide dismutase; KEGG: bja:bll7559 probable Fe/Mn superoxide dismutase; manganese and iron superoxide dismutase 2884689 6198892 Bind_2529 Beijerinckia indica subsp. indica ATCC 9039 manganese and iron superoxide dismutase YP_001833620.1 2884096 D 395963 CDS YP_001833621.1 182679475 6198513 2884784..2886133 1 NC_010581.1 PFAM: amino acid permease-associated region; KEGG: sen:SACE_3292 amino acid permease-associated region; amino acid permease-associated protein 2886133 6198513 Bind_2530 Beijerinckia indica subsp. indica ATCC 9039 amino acid permease-associated protein YP_001833621.1 2884784 D 395963 CDS YP_001833622.1 182679476 6198441 2886248..2887471 1 NC_010581.1 KEGG: rpe:RPE_0575 hypothetical protein; siderophore synthetase component-like protein 2887471 6198441 Bind_2531 Beijerinckia indica subsp. indica ATCC 9039 siderophore synthetase component-like protein YP_001833622.1 2886248 D 395963 CDS YP_001833623.1 182679477 6199348 complement(2887635..2888345) 1 NC_010581.1 KEGG: ret:RHE_PE00215 putative nickel ABC transporter, permease protein; putative nickel ABC transporter permease 2888345 6199348 Bind_2532 Beijerinckia indica subsp. indica ATCC 9039 putative nickel ABC transporter permease YP_001833623.1 2887635 R 395963 CDS YP_001833624.1 182679478 6200562 complement(2889053..2889580) 1 NC_010581.1 PFAM: MaoC domain protein dehydratase; KEGG: ypi:YpsIP31758_2157 MaoC domain protein; dehydratase 2889580 6200562 Bind_2533 Beijerinckia indica subsp. indica ATCC 9039 dehydratase YP_001833624.1 2889053 R 395963 CDS YP_001833625.1 182679479 6199834 complement(2889634..2890458) 1 NC_010581.1 PFAM: HpcH/HpaI aldolase; KEGG: yps:YPTB1926 putative citrate lyase beta chain; citryl-CoA lyase 2890458 6199834 Bind_2534 Beijerinckia indica subsp. indica ATCC 9039 citryl-CoA lyase YP_001833625.1 2889634 R 395963 CDS YP_001833626.1 182679480 6200211 complement(2890731..2892050) 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5395 major facilitator superfamily MFS_1; major facilitator transporter 2892050 6200211 Bind_2535 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833626.1 2890731 R 395963 CDS YP_001833627.1 182679481 6199022 complement(2892101..2893285) 1 NC_010581.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bcs:BCAN_B0166 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2893285 6199022 Bind_2536 Beijerinckia indica subsp. indica ATCC 9039 L-carnitine dehydratase/bile acid-inducible protein F YP_001833627.1 2892101 R 395963 CDS YP_001833628.1 182679482 6199853 2893395..2894327 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding; LysR family transcriptional regulator 2894327 6199853 Bind_2537 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833628.1 2893395 D 395963 CDS YP_001833629.1 182679483 6199127 2894521..2894775 1 NC_010581.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rle:pRL90096 hypothetical protein; prevent-host-death family protein 2894775 6199127 Bind_2538 Beijerinckia indica subsp. indica ATCC 9039 prevent-host-death family protein YP_001833629.1 2894521 D 395963 CDS YP_001833630.1 182679484 6201238 2894775..2895185 1 NC_010581.1 PFAM: PilT protein domain protein; KEGG: sme:SMa0453 Yle homolog, A. tumefaciens; PilT domain-containing protein 2895185 6201238 Bind_2539 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001833630.1 2894775 D 395963 CDS YP_001833631.1 182679485 6199684 complement(2895229..2896119) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_3423 transcriptional regulator, LysR family; LysR family transcriptional regulator 2896119 6199684 Bind_2540 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833631.1 2895229 R 395963 CDS YP_001833632.1 182679486 6198736 2896270..2897319 1 NC_010581.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bpt:Bpet3651 putative malate dehydrogenase; malate/L-lactate dehydrogenase 2897319 6198736 Bind_2541 Beijerinckia indica subsp. indica ATCC 9039 malate/L-lactate dehydrogenase YP_001833632.1 2896270 D 395963 CDS YP_001833633.1 182679487 6200129 2897400..2898713 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4805 major facilitator superfamily MFS_1; major facilitator transporter 2898713 6200129 Bind_2542 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833633.1 2897400 D 395963 CDS YP_001833634.1 182679488 6198643 2898716..2900017 1 NC_010581.1 KEGG: bld:BLi04142 YkgB; 3-carboxymuconate cyclase-like protein 2900017 6198643 Bind_2543 Beijerinckia indica subsp. indica ATCC 9039 3-carboxymuconate cyclase-like protein YP_001833634.1 2898716 D 395963 CDS YP_001833635.1 182679489 6200254 2900396..2901937 1 NC_010581.1 PFAM: porin; KEGG: mex:Mext_3186 porin; porin 2901937 6200254 Bind_2544 Beijerinckia indica subsp. indica ATCC 9039 porin YP_001833635.1 2900396 D 395963 CDS YP_001833636.1 182679490 6199901 2902136..2903353 1 NC_010581.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2903353 6199901 Bind_2545 Beijerinckia indica subsp. indica ATCC 9039 isocitrate dehydrogenase YP_001833636.1 2902136 D 395963 CDS YP_001833637.1 182679491 6200380 complement(2903497..2905092) 1 NC_010581.1 PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_L_2772 probable oligopeptide binding protein AppA; extracellular solute-binding protein 2905092 6200380 Bind_2546 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001833637.1 2903497 R 395963 CDS YP_001833638.1 182679492 6198509 complement(2905105..2906709) 1 NC_010581.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_2585 putative ABC transporter, substrate binding subunit; extracellular solute-binding protein 2906709 6198509 Bind_2547 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001833638.1 2905105 R 395963 CDS YP_001833639.1 182679493 6200842 2906932..2907918 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2660 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2907918 6200842 Bind_2548 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833639.1 2906932 D 395963 CDS YP_001833640.1 182679494 6201717 2907918..2908952 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2661 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2908952 6201717 Bind_2549 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001833640.1 2907918 D 395963 CDS YP_001833641.1 182679495 6199283 2909030..2910280 1 NC_010581.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_2524 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 2910280 6199283 Bind_2550 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase type 2 YP_001833641.1 2909030 D 395963 CDS YP_001833642.1 182679496 6199929 complement(2910415..2911557) 1 NC_010581.1 PFAM: Rhodanese domain protein; KEGG: bbt:BBta_2586 putative thiosulfate sulfurtransferase; rhodanese domain-containing protein 2911557 6199929 Bind_2551 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001833642.1 2910415 R 395963 CDS YP_001833643.1 182679497 6199280 2912094..2913095 1 NC_010581.1 KEGG: sme:SMa2081 probable ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2913095 6199280 Bind_2552 Beijerinckia indica subsp. indica ATCC 9039 oligopeptide/dipeptide ABC transporter ATPase YP_001833643.1 2912094 D 395963 CDS YP_001833644.1 182679498 6198783 2913073..2914014 1 NC_010581.1 KEGG: azc:AZC_2663 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2914014 6198783 Bind_2553 Beijerinckia indica subsp. indica ATCC 9039 oligopeptide/dipeptide ABC transporter ATPase YP_001833644.1 2913073 D 395963 CDS YP_001833645.1 182679499 6198763 2914186..2916771 1 NC_010581.1 PFAM: TonB-dependent receptor; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 2916771 6198763 Bind_2554 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833645.1 2914186 D 395963 CDS YP_001833646.1 182679500 6200353 2916957..2919458 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pae:PA2335 probable TonB-dependent receptor; TonB-dependent receptor 2919458 6200353 Bind_2555 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001833646.1 2916957 D 395963 CDS YP_001833647.1 182679501 6198418 2919731..2921098 1 NC_010581.1 KEGG: mms:mma_0258 nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 2921098 6198418 Bind_2556 Beijerinckia indica subsp. indica ATCC 9039 nitrilotriacetate monooxygenase component A YP_001833647.1 2919731 D 395963 CDS YP_001833648.1 182679502 6198415 2921184..2921750 1 NC_010581.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; integrase catalytic subunit 2921750 6198415 Bind_2557 Beijerinckia indica subsp. indica ATCC 9039 integrase catalytic subunit YP_001833648.1 2921184 D 395963 CDS YP_001833649.1 182679503 6198933 complement(2921833..2922405) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr5353 transcriptional regulator; TetR family transcriptional regulator 2922405 6198933 Bind_2558 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833649.1 2921833 R 395963 CDS YP_001833650.1 182679504 6199002 complement(2922568..2922903) 1 NC_010581.1 hypothetical protein 2922903 6199002 Bind_2559 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833650.1 2922568 R 395963 CDS YP_001833651.1 182679505 6198856 complement(2923125..2924408) 1 NC_010581.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 2924408 6198856 Bind_2560 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-(acyl carrier protein) synthase II YP_001833651.1 2923125 R 395963 CDS YP_001833652.1 182679506 6198790 complement(2924431..2927547) 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: ret:RHE_CH00528 probable cation/multidrug efflux transport protein; acriflavin resistance protein 2927547 6198790 Bind_2561 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001833652.1 2924431 R 395963 CDS YP_001833653.1 182679507 6198789 complement(2927547..2928662) 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMa1885 putative membrane efflux protein; RND family efflux transporter MFP subunit 2928662 6198789 Bind_2562 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833653.1 2927547 R 395963 CDS YP_001833654.1 182679508 6198772 2928760..2929338 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: sme:SMa1887 putative transcriptional regulator; TetR family transcriptional regulator 2929338 6198772 Bind_2563 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833654.1 2928760 D 395963 CDS YP_001833655.1 182679509 6198456 2929726..2930592 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: ath:AT4G36530 hydrolase, alpha/beta fold family protein; alpha/beta hydrolase fold protein 2930592 6198456 Bind_2564 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001833655.1 2929726 D 395963 CDS YP_001833656.1 182679510 6198461 2930697..2931170 1 NC_010581.1 KEGG: pcr:Pcryo_1252 hypothetical protein; hypothetical protein 2931170 6198461 Bind_2565 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833656.1 2930697 D 395963 CDS YP_001833657.1 182679511 6199136 2932387..2933730 1 NC_010581.1 KEGG: bra:BRADO4277 nitrilotriacetate monooxygenase component A (NtA monooxygenase component A) (NtA-MO A); nitrilotriacetate monooxygenase component A 2933730 6199136 Bind_2568 Beijerinckia indica subsp. indica ATCC 9039 nitrilotriacetate monooxygenase component A YP_001833657.1 2932387 D 395963 CDS YP_001833658.1 182679512 6199255 2933748..2934827 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: azc:AZC_2664 putative oxido-reductase; aldo/keto reductase 2934827 6199255 Bind_2569 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001833658.1 2933748 D 395963 CDS YP_001833659.1 182679513 6199182 complement(2935271..2936311) 1 NC_010581.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rle:pRL110607 putative transposase family protein; transposase IS116/IS110/IS902 family protein 2936311 6199182 Bind_2571 Beijerinckia indica subsp. indica ATCC 9039 transposase IS116/IS110/IS902 family protein YP_001833659.1 2935271 R 395963 CDS YP_001833660.1 182679514 6201032 2937112..2938152 1 NC_010581.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: mlo:mlr5805 cytochrome c peroxidase; cytochrome-c peroxidase 2938152 6201032 Bind_2573 Beijerinckia indica subsp. indica ATCC 9039 cytochrome-c peroxidase YP_001833660.1 2937112 D 395963 CDS YP_001833661.1 182679515 6199999 complement(2940481..2941908) 1 NC_010581.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1718 major facilitator superfamily (MFS) transporter; major facilitator transporter 2941908 6199999 Bind_2576 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833661.1 2940481 R 395963 CDS YP_001833662.1 182679516 6201036 2942185..2943594 1 NC_010581.1 KEGG: bxe:Bxe_A1720 hypothetical protein; hypothetical protein 2943594 6201036 Bind_2577 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833662.1 2942185 D 395963 CDS YP_001833663.1 182679517 6199538 2943594..2943902 1 NC_010581.1 KEGG: bxe:Bxe_A1719 hypothetical protein; hypothetical protein 2943902 6199538 Bind_2578 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833663.1 2943594 D 395963 CDS YP_001833664.1 182679518 6200311 2943913..2944959 1 NC_010581.1 KEGG: bxe:Bxe_A1722 predicted metal-dependent hydrolase; metal-dependent hydrolase 2944959 6200311 Bind_2579 Beijerinckia indica subsp. indica ATCC 9039 metal-dependent hydrolase YP_001833664.1 2943913 D 395963 CDS YP_001833665.1 182679519 6200165 2945121..2946398 1 NC_010581.1 PFAM: regulatory protein MerR; KEGG: cak:Caul_0483 DNA binding domain protein, excisionase family; regulatory protein MerR 2946398 6200165 Bind_2580 Beijerinckia indica subsp. indica ATCC 9039 regulatory protein MerR YP_001833665.1 2945121 D 395963 CDS YP_001833666.1 182679520 6200381 complement(2946956..2948794) 1 NC_010581.1 PFAM: protein of unknown function DUF1302; KEGG: cvi:CV_2103 hypothetical protein; hypothetical protein 2948794 6200381 Bind_2582 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833666.1 2946956 R 395963 CDS YP_001833667.1 182679521 6200609 2950080..2950319 1 NC_010581.1 KEGG: rle:pRL70138 putative insertion sequence transposase-like protein; putative insertion sequence transposase-like protein 2950319 6200609 Bind_2583 Beijerinckia indica subsp. indica ATCC 9039 putative insertion sequence transposase-like protein YP_001833667.1 2950080 D 395963 CDS YP_001833668.1 182679522 6200928 2950626..2950880 1 NC_010581.1 KEGG: sil:SPO1864 hypothetical protein; hypothetical protein 2950880 6200928 Bind_2584 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833668.1 2950626 D 395963 CDS YP_001833669.1 182679523 6201349 complement(2951349..2952128) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1284 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2952128 6201349 Bind_2585 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833669.1 2951349 R 395963 CDS YP_001833670.1 182679524 6200489 complement(2952118..2952786) 1 NC_010581.1 KEGG: xau:Xaut_1285 heme oxygenase family; heme oxygenase family 2952786 6200489 Bind_2586 Beijerinckia indica subsp. indica ATCC 9039 heme oxygenase family YP_001833670.1 2952118 R 395963 CDS YP_001833671.1 182679525 6199494 complement(2952807..2954285) 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_1286 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2954285 6199494 Bind_2587 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001833671.1 2952807 R 395963 CDS YP_001833672.1 182679526 6200834 complement(2954269..2954853) 1 NC_010581.1 KEGG: xau:Xaut_1287 hypothetical protein; hypothetical protein 2954853 6200834 Bind_2588 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833672.1 2954269 R 395963 CDS YP_001833673.1 182679527 6199747 2955800..2956513 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_4997 DNA-binding response regulator; two component transcriptional regulator 2956513 6199747 Bind_2589 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001833673.1 2955800 D 395963 CDS YP_001833674.1 182679528 6201261 2956510..2957928 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_4996 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2957928 6201261 Bind_2590 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833674.1 2956510 D 395963 CDS YP_001833675.1 182679529 6200128 complement(2958125..2958625) 1 NC_010581.1 hypothetical protein 2958625 6200128 Bind_2591 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833675.1 2958125 R 395963 CDS YP_001833676.1 182679530 6201311 2960518..2961330 1 NC_010581.1 PFAM: VacJ family lipoprotein; KEGG: ppg:PputGB1_1970 VacJ family lipoprotein; VacJ family lipoprotein 2961330 6201311 Bind_2594 Beijerinckia indica subsp. indica ATCC 9039 VacJ family lipoprotein YP_001833676.1 2960518 D 395963 CDS YP_001833677.1 182679531 6201571 2961528..2962031 1 NC_010581.1 KEGG: mex:Mext_2011 hypothetical protein; hypothetical protein 2962031 6201571 Bind_2595 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833677.1 2961528 D 395963 CDS YP_001833678.1 182679532 6200416 2962321..2962950 1 NC_010581.1 KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2962950 6200416 Bind_2596 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833678.1 2962321 D 395963 CDS YP_001833679.1 182679533 6199948 2962950..2963660 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1282 methyltransferase type 11; type 11 methyltransferase 2963660 6199948 Bind_2597 Beijerinckia indica subsp. indica ATCC 9039 type 11 methyltransferase YP_001833679.1 2962950 D 395963 CDS YP_001833680.1 182679534 6200801 2963686..2964087 1 NC_010581.1 KEGG: bur:Bcep18194_A5701 hypothetical protein; hypothetical protein 2964087 6200801 Bind_2598 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833680.1 2963686 D 395963 CDS YP_001833681.1 182679535 6200030 2964349..2964861 1 NC_010581.1 KEGG: psa:PST_1628 hypothetical protein; hypothetical protein 2964861 6200030 Bind_2599 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833681.1 2964349 D 395963 CDS YP_001833682.1 182679536 6200512 2965034..2965705 1 NC_010581.1 KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2965705 6200512 Bind_2600 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833682.1 2965034 D 395963 CDS YP_001833683.1 182679537 6200296 2965914..2967269 1 NC_010581.1 PFAM: aminotransferase class-III; KEGG: sus:Acid_1357 aminotransferase class-III; class III aminotransferase 2967269 6200296 Bind_2601 Beijerinckia indica subsp. indica ATCC 9039 class III aminotransferase YP_001833683.1 2965914 D 395963 CDS YP_001833684.1 182679538 6201271 2967284..2968348 1 NC_010581.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: aba:Acid345_3105 chalcone and stilbene synthases-like; 3-oxoacyl-ACP synthase 2968348 6201271 Bind_2602 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-ACP synthase YP_001833684.1 2967284 D 395963 CDS YP_001833685.1 182679539 6199117 2968342..2969475 1 NC_010581.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: sus:Acid_1355 monooxygenase, FAD-binding; monooxygenase FAD-binding 2969475 6199117 Bind_2603 Beijerinckia indica subsp. indica ATCC 9039 monooxygenase FAD-binding YP_001833685.1 2968342 D 395963 CDS YP_001833686.1 182679540 6200491 join(2970093..2970419,2970419..2970856) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 2970856 6200491 Bind_2604 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001833686.1 2970093 D 395963 CDS YP_001833687.1 182679541 6200890 complement(2971437..2971727) 1 NC_010581.1 hypothetical protein 2971727 6200890 Bind_2606 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833687.1 2971437 R 395963 CDS YP_001833688.1 182679542 6200223 complement(2971761..2972318) 1 NC_010581.1 KEGG: bte:BTH_I2760 hypothetical protein; hypothetical protein 2972318 6200223 Bind_2607 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833688.1 2971761 R 395963 CDS YP_001833689.1 182679543 6199688 complement(2973740..2974681) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1769 transcriptional regulator, AraC family; AraC family transcriptional regulator 2974681 6199688 Bind_2609 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833689.1 2973740 R 395963 CDS YP_001833690.1 182679544 6200515 complement(2975261..2976160) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bch:Bcen2424_4647 transcriptional regulator, AraC family; AraC family transcriptional regulator 2976160 6200515 Bind_2611 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833690.1 2975261 R 395963 CDS YP_001833691.1 182679545 6200299 2976331..2977284 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_C7134 aldo/keto reductase; aldo/keto reductase 2977284 6200299 Bind_2612 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001833691.1 2976331 D 395963 CDS YP_001833692.1 182679546 6200310 2977795..2978685 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_A1770 putative dyhydroflavanol-4-reductase; NAD-dependent epimerase/dehydratase 2978685 6200310 Bind_2613 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001833692.1 2977795 D 395963 CDS YP_001833693.1 182679547 6198630 2978731..2979717 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_A1771 putative nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2979717 6198630 Bind_2614 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001833693.1 2978731 D 395963 CDS YP_001833694.1 182679548 6198739 2979824..2981623 1 NC_010581.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bxe:Bxe_A1772 putative esterase; X-Pro dipeptidyl-peptidase domain-containing protein 2981623 6198739 Bind_2615 Beijerinckia indica subsp. indica ATCC 9039 X-Pro dipeptidyl-peptidase domain-containing protein YP_001833694.1 2979824 D 395963 CDS YP_001833695.1 182679549 6199492 complement(join(2984325..2984936,2984936..2985283)) 1 NC_010581.1 KEGG: sil:SPO2406 ISSpo6, transposase orf A; transposase 2985283 6199492 Bind_2619 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001833695.1 2984325 R 395963 CDS YP_001833696.1 182679550 6200849 complement(2985374..2986327) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A3662 putative AraC-type DNA-binding domain-containing protein; AraC family transcriptional regulator 2986327 6200849 Bind_2620 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833696.1 2985374 R 395963 CDS YP_001833697.1 182679551 6199141 2987646..2988842 1 NC_010581.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 2988842 6199141 Bind_2622 Beijerinckia indica subsp. indica ATCC 9039 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001833697.1 2987646 D 395963 CDS YP_001833698.1 182679552 6199457 2988899..2989627 1 NC_010581.1 PFAM: ThiJ/PfpI domain protein; KEGG: vvy:VV0154 hypothetical protein; ThiJ/PfpI domain-containing protein 2989627 6199457 Bind_2623 Beijerinckia indica subsp. indica ATCC 9039 ThiJ/PfpI domain-containing protein YP_001833698.1 2988899 D 395963 CDS YP_001833699.1 182679553 6200392 2989665..2990825 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_4260 luciferase family protein; alkanesulfonate monooxygenase 2990825 6200392 Bind_2624 Beijerinckia indica subsp. indica ATCC 9039 alkanesulfonate monooxygenase YP_001833699.1 2989665 D 395963 CDS YP_001833700.1 182679554 6199808 2990904..2991431 1 NC_010581.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein; flavin reductase domain-containing protein 2991431 6199808 Bind_2625 Beijerinckia indica subsp. indica ATCC 9039 flavin reductase domain-containing protein YP_001833700.1 2990904 D 395963 CDS YP_001833701.1 182679555 6200800 2991681..2992535 1 NC_010581.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpt:Bpet3943 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2992535 6200800 Bind_2626 Beijerinckia indica subsp. indica ATCC 9039 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001833701.1 2991681 D 395963 CDS YP_001833702.1 182679556 6200634 2992860..2993540 1 NC_010581.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: rle:RL2726 putative riboflavin biosynthesis protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2993540 6200634 Bind_2627 Beijerinckia indica subsp. indica ATCC 9039 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001833702.1 2992860 D 395963 CDS YP_001833703.1 182679557 6198689 2993937..2994551 1 NC_010581.1 KEGG: xau:Xaut_1352 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2994551 6198689 Bind_2628 Beijerinckia indica subsp. indica ATCC 9039 extracellular ligand-binding receptor YP_001833703.1 2993937 D 395963 CDS YP_001833704.1 182679558 6198608 2994966..2995778 1 NC_010581.1 KEGG: xau:Xaut_4179 hypothetical protein; hypothetical protein 2995778 6198608 Bind_2629 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833704.1 2994966 D 395963 CDS YP_001833705.1 182679559 6199847 complement(2996670..2997677) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA303 alcohol dehydrogenase; alcohol dehydrogenase 2997677 6199847 Bind_2633 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001833705.1 2996670 R 395963 CDS YP_001833706.1 182679560 6199671 complement(2997674..2998900) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4134 major facilitator superfamily MFS_1; major facilitator transporter 2998900 6199671 Bind_2634 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833706.1 2997674 R 395963 CDS YP_001833707.1 182679561 6200572 2999002..2999895 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_3209 transcriptional regulator, LysR family; LysR family transcriptional regulator 2999895 6200572 Bind_2635 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833707.1 2999002 D 395963 CDS YP_001833708.1 182679562 6198686 complement(3000708..3001430) 1 NC_010581.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; KEGG: bvi:Bcep1808_6083 peptidase M10A and M12B, matrixin and adamalysin; peptidase M10A and M12B matrixin and adamalysin 3001430 6198686 Bind_2637 Beijerinckia indica subsp. indica ATCC 9039 peptidase M10A and M12B matrixin and adamalysin YP_001833708.1 3000708 R 395963 CDS YP_001833709.1 182679563 6200960 complement(3002507..3003811) 1 NC_010581.1 KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 3003811 6200960 Bind_2639 Beijerinckia indica subsp. indica ATCC 9039 nucleotide sugar dehydrogenase YP_001833709.1 3002507 R 395963 CDS YP_001833710.1 182679564 6199467 complement(3004057..3004848) 1 NC_010581.1 PFAM: regulatory protein LysR; TOBE domain protein; KEGG: azc:AZC_1791 molybdenum-binding protein; ModE family transcriptional regulator 3004848 6199467 Bind_2640 Beijerinckia indica subsp. indica ATCC 9039 ModE family transcriptional regulator YP_001833710.1 3004057 R 395963 CDS YP_001833711.1 182679565 6200737 complement(3004890..3005138) 1 NC_010581.1 hypothetical protein 3005138 6200737 Bind_2641 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833711.1 3004890 R 395963 CDS YP_001833712.1 182679566 6200360 complement(3005143..3006555) 1 NC_010581.1 KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3006555 6200360 Bind_2642 Beijerinckia indica subsp. indica ATCC 9039 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001833712.1 3005143 R 395963 CDS YP_001833713.1 182679567 6200759 complement(3007211..3009523) 1 NC_010581.1 PFAM: glycoside hydrolase family 10; glycosyl transferase group 1; KEGG: syf:Synpcc7942_1400 endo-1,4-beta-xylanase; endo-1,4-beta-xylanase 3009523 6200759 Bind_2643 Beijerinckia indica subsp. indica ATCC 9039 endo-1,4-beta-xylanase YP_001833713.1 3007211 R 395963 CDS YP_001833714.1 182679568 6200707 complement(3009716..3011935) 1 NC_010581.1 KEGG: bja:bll2362 succinoglycan biosynthesis transport protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide tyrosine-protein kinase 3011935 6200707 Bind_2644 Beijerinckia indica subsp. indica ATCC 9039 exopolysaccharide tyrosine-protein kinase YP_001833714.1 3009716 R 395963 CDS YP_001833715.1 182679569 6200414 complement(3012005..3013201) 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: gvi:gll2195 probable glycosyl transferase; group 1 glycosyl transferase 3013201 6200414 Bind_2645 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001833715.1 3012005 R 395963 CDS YP_001833716.1 182679570 6200813 3014741..3015559 1 NC_010581.1 KEGG: mgm:Mmc1_1231 hypothetical protein; hypothetical protein 3015559 6200813 Bind_2647 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833716.1 3014741 D 395963 CDS YP_001833717.1 182679571 6199400 3015709..3016521 1 NC_010581.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: jan:Jann_4258 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 3016521 6199400 Bind_2648 Beijerinckia indica subsp. indica ATCC 9039 WecB/TagA/CpsF family glycosyl transferase YP_001833717.1 3015709 D 395963 CDS YP_001833718.1 182679572 6199642 3017357..3018397 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: cak:Caul_2119 glycosyl transferase group 1; group 1 glycosyl transferase 3018397 6199642 Bind_2650 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001833718.1 3017357 D 395963 CDS YP_001833719.1 182679573 6200573 3018450..3019541 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: mmr:Mmar10_0197 acyltransferase 3; acyltransferase 3 3019541 6200573 Bind_2651 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001833719.1 3018450 D 395963 CDS YP_001833720.1 182679574 6199880 complement(3020464..3021906) 1 NC_010581.1 PFAM: polysaccharide biosynthesis protein; KEGG: noc:Noc_2481 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3021906 6199880 Bind_2653 Beijerinckia indica subsp. indica ATCC 9039 polysaccharide biosynthesis protein YP_001833720.1 3020464 R 395963 CDS YP_001833721.1 182679575 6199599 3023096..3024181 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: psa:PST_2375 predicted membrane protein; acyltransferase 3 3024181 6199599 Bind_2655 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001833721.1 3023096 D 395963 CDS YP_001833722.1 182679576 6200685 complement(3024202..3025200) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ccr:CC_2378 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 3025200 6200685 Bind_2656 Beijerinckia indica subsp. indica ATCC 9039 NAD-dependent epimerase/dehydratase YP_001833722.1 3024202 R 395963 CDS YP_001833723.1 182679577 6199775 3025753..3027153 1 NC_010581.1 KEGG: mlo:mll2088 hypothetical protein; hypothetical protein 3027153 6199775 Bind_2657 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833723.1 3025753 D 395963 CDS YP_001833724.1 182679578 6199237 3027340..3027906 1 NC_010581.1 KEGG: rpa:RPA3354 hypothetical protein; hypothetical protein 3027906 6199237 Bind_2658 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833724.1 3027340 D 395963 CDS YP_001833725.1 182679579 6199485 complement(3029950..3030240) 1 NC_010581.1 hypothetical protein 3030240 6199485 Bind_2661 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833725.1 3029950 R 395963 CDS YP_001833726.1 182679580 6199252 complement(3033408..3034631) 1 NC_010581.1 PFAM: integrase family protein; KEGG: oan:Oant_0882 phage integrase family protein; integrase family protein 3034631 6199252 Bind_2665 Beijerinckia indica subsp. indica ATCC 9039 integrase family protein YP_001833726.1 3033408 R 395963 CDS YP_001833727.1 182679581 6200384 3034737..3034925 1 NC_010581.1 PFAM: YcfA family protein; KEGG: nha:Nham_0566 YcfA-like; hypothetical protein 3034925 6200384 Bind_2666 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833727.1 3034737 D 395963 CDS YP_001833728.1 182679582 6201153 3034930..3035328 1 NC_010581.1 PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: nha:Nham_0567 protein of unknown function UPF0150; hypothetical protein 3035328 6201153 Bind_2667 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833728.1 3034930 D 395963 CDS YP_001833729.1 182679583 6201240 3035546..3036076 1 NC_010581.1 hypothetical protein 3036076 6201240 Bind_2668 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833729.1 3035546 D 395963 CDS YP_001833730.1 182679584 6200026 3036080..3036325 1 NC_010581.1 hypothetical protein 3036325 6200026 Bind_2669 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833730.1 3036080 D 395963 CDS YP_001833731.1 182679585 6198801 3036529..3037212 1 NC_010581.1 hypothetical protein 3037212 6198801 Bind_2670 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833731.1 3036529 D 395963 CDS YP_001833732.1 182679586 6199764 3037301..3038359 1 NC_010581.1 KEGG: nar:Saro_2712 hypothetical protein; hypothetical protein 3038359 6199764 Bind_2671 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833732.1 3037301 D 395963 CDS YP_001833733.1 182679587 6198658 3039000..3041444 1 NC_010581.1 PFAM: N-6 DNA methylase; KEGG: dno:DNO_0223 type I restriction-modification system, M subunit; N-6 DNA methylase 3041444 6198658 Bind_2672 Beijerinckia indica subsp. indica ATCC 9039 N-6 DNA methylase YP_001833733.1 3039000 D 395963 CDS YP_001833734.1 182679588 6198858 3041441..3042688 1 NC_010581.1 PFAM: restriction modification system DNA specificity domain; KEGG: saq:Sare_2852 restriction endonuclease S subunits-like protein; restriction modification system DNA specificity subunit 3042688 6198858 Bind_2673 Beijerinckia indica subsp. indica ATCC 9039 restriction modification system DNA specificity subunit YP_001833734.1 3041441 D 395963 CDS YP_001833735.1 182679589 6200265 3042685..3045768 1 NC_010581.1 KEGG: sbm:Shew185_2197 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 3045768 6200265 Bind_2674 Beijerinckia indica subsp. indica ATCC 9039 HsdR family type I site-specific deoxyribonuclease YP_001833735.1 3042685 D 395963 CDS YP_001833736.1 182679590 6200040 3045758..3046489 1 NC_010581.1 PFAM: protein of unknown function DUF45; KEGG: mma:MM_2291 zinc metalloprotease; hypothetical protein 3046489 6200040 Bind_2675 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833736.1 3045758 D 395963 CDS YP_001833737.1 182679591 6199916 complement(3046526..3048994) 1 NC_010581.1 KEGG: ret:RHE_PD00007 hypothetical protein; hypothetical protein 3048994 6199916 Bind_2676 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833737.1 3046526 R 395963 CDS YP_001833738.1 182679592 6200900 complement(3049010..3049996) 1 NC_010581.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PD00006 probable ATPase (ATP-binding) protein; ATPase central domain-containing protein 3049996 6200900 Bind_2677 Beijerinckia indica subsp. indica ATCC 9039 ATPase central domain-containing protein YP_001833738.1 3049010 R 395963 CDS YP_001833739.1 182679593 6199795 3050350..3050616 1 NC_010581.1 hypothetical protein 3050616 6199795 Bind_2678 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833739.1 3050350 D 395963 CDS YP_001833740.1 182679594 6200338 3051772..3054345 1 NC_010581.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3054345 6200338 Bind_2679 Beijerinckia indica subsp. indica ATCC 9039 heavy metal translocating P-type ATPase YP_001833740.1 3051772 D 395963 CDS YP_001833741.1 182679595 6200432 complement(3054356..3054907) 1 NC_010581.1 PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 protein of unknown function DUF1234; hypothetical protein 3054907 6200432 Bind_2680 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833741.1 3054356 R 395963 CDS YP_001833742.1 182679596 6201111 complement(3054917..3055561) 1 NC_010581.1 KEGG: lbl:LBL_1518 hypothetical protein; hypothetical protein 3055561 6201111 Bind_2681 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833742.1 3054917 R 395963 CDS YP_001833743.1 182679597 6198503 complement(3055619..3056926) 1 NC_010581.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase; adenylosuccinate lyase 3056926 6198503 Bind_2682 Beijerinckia indica subsp. indica ATCC 9039 adenylosuccinate lyase YP_001833743.1 3055619 R 395963 CDS YP_001833744.1 182679598 6201359 complement(3057114..3058142) 1 NC_010581.1 PFAM: peptidase S58 DmpA; KEGG: rpa:RPA3813 peptidase family T4; peptidase S58 DmpA 3058142 6201359 Bind_2683 Beijerinckia indica subsp. indica ATCC 9039 peptidase S58 DmpA YP_001833744.1 3057114 R 395963 CDS YP_001833745.1 182679599 6199840 complement(3058305..3058838) 1 NC_010581.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein; lytic transglycosylase 3058838 6199840 Bind_2684 Beijerinckia indica subsp. indica ATCC 9039 lytic transglycosylase YP_001833745.1 3058305 R 395963 CDS YP_001833746.1 182679600 6198447 complement(3058822..3060531) 1 NC_010581.1 KEGG: dpo:Dpse_GA17283 GA17283-PA; hypothetical protein 3060531 6198447 Bind_2685 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833746.1 3058822 R 395963 CDS YP_001833747.1 182679601 6199809 complement(3060528..3061790) 1 NC_010581.1 KEGG: mex:Mext_0632 putative chemotaxis protein precursor; putative chemotaxis protein 3061790 6199809 Bind_2686 Beijerinckia indica subsp. indica ATCC 9039 putative chemotaxis protein YP_001833747.1 3060528 R 395963 CDS YP_001833748.1 182679602 6200277 complement(3061787..3063037) 1 NC_010581.1 PFAM: OmpA/MotB domain protein; KEGG: bja:bll6862 flagellar motor protein MotB; OmpA/MotB domain-containing protein 3063037 6200277 Bind_2687 Beijerinckia indica subsp. indica ATCC 9039 OmpA/MotB domain-containing protein YP_001833748.1 3061787 R 395963 CDS YP_001833749.1 182679603 6200167 complement(3063040..3063672) 1 NC_010581.1 KEGG: bja:bll6863 hypothetical protein; hypothetical protein 3063672 6200167 Bind_2688 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833749.1 3063040 R 395963 CDS YP_001833750.1 182679604 6200788 complement(3063669..3065312) 1 NC_010581.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3065312 fliF 6200788 fliF Beijerinckia indica subsp. indica ATCC 9039 flagellar MS-ring protein YP_001833750.1 3063669 R 395963 CDS YP_001833751.1 182679605 6200940 complement(3065474..3066460) 1 NC_010581.1 PFAM: flagellin domain protein; KEGG: ret:RHE_CH00669 flagellin C protein; flagellin domain-containing protein 3066460 6200940 Bind_2690 Beijerinckia indica subsp. indica ATCC 9039 flagellin domain-containing protein YP_001833751.1 3065474 R 395963 CDS YP_001833752.1 182679606 6200082 3067036..3068271 1 NC_010581.1 PFAM: Rhodanese domain protein; KEGG: bja:bll7966 putative thiosulfate sulfurtransferase; rhodanese domain-containing protein 3068271 6200082 Bind_2691 Beijerinckia indica subsp. indica ATCC 9039 rhodanese domain-containing protein YP_001833752.1 3067036 D 395963 CDS YP_001833753.1 182679607 6198777 3068345..3069433 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_2509 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 3069433 6198777 Bind_2692 Beijerinckia indica subsp. indica ATCC 9039 alkanesulfonate monooxygenase YP_001833753.1 3068345 D 395963 CDS YP_001833754.1 182679608 6198466 3069487..3070266 1 NC_010581.1 PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO4286 hypothetical protein; hypothetical protein 3070266 6198466 Bind_2693 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833754.1 3069487 D 395963 CDS YP_001833755.1 182679609 6199019 3071086..3073377 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Patatin; KEGG: xau:Xaut_4913 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3073377 6199019 Bind_2694 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001833755.1 3071086 D 395963 CDS YP_001833756.1 182679610 6199817 3073728..3074468 1 NC_010581.1 converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 3074468 6199817 Bind_2695 Beijerinckia indica subsp. indica ATCC 9039 acetoacetate decarboxylase YP_001833756.1 3073728 D 395963 CDS YP_001833757.1 182679611 6200062 3074515..3075297 1 NC_010581.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1887 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 3075297 6200062 Bind_2696 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxybutyrate dehydrogenase YP_001833757.1 3074515 D 395963 CDS YP_001833758.1 182679612 6199350 complement(3075389..3076216) 1 NC_010581.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 3076216 6199350 Bind_2697 Beijerinckia indica subsp. indica ATCC 9039 cobalamin 5'-phosphate synthase YP_001833758.1 3075389 R 395963 CDS YP_001833759.1 182679613 6198843 complement(3076282..3076704) 1 NC_010581.1 KEGG: rpc:RPC_1349 hypothetical protein; hypothetical protein 3076704 6198843 Bind_2698 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833759.1 3076282 R 395963 CDS YP_001833760.1 182679614 6200063 complement(3076910..3078412) 1 NC_010581.1 PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: mex:Mext_4231 peptidase M23B; peptidase M23 3078412 6200063 Bind_2699 Beijerinckia indica subsp. indica ATCC 9039 peptidase M23 YP_001833760.1 3076910 R 395963 CDS YP_001833761.1 182679615 6199522 complement(3078652..3079344) 1 NC_010581.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: rpe:RPE_2705 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3079344 6199522 Bind_2700 Beijerinckia indica subsp. indica ATCC 9039 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001833761.1 3078652 R 395963 CDS YP_001833762.1 182679616 6198773 complement(3079351..3080142) 1 NC_010581.1 KEGG: mex:Mext_4233 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 3080142 6198773 Bind_2701 Beijerinckia indica subsp. indica ATCC 9039 stationary-phase survival protein SurE YP_001833762.1 3079351 R 395963 CDS YP_001833763.1 182679617 6198532 complement(3080170..3081480) 1 NC_010581.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3081480 6198532 Bind_2702 Beijerinckia indica subsp. indica ATCC 9039 seryl-tRNA synthetase YP_001833763.1 3080170 R 395963 CDS YP_001833764.1 182679618 6198405 complement(3081553..3082344) 1 NC_010581.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bja:bll4749 sec-independent protein translocase protein; Sec-independent protein translocase subunit TatC 3082344 6198405 Bind_2703 Beijerinckia indica subsp. indica ATCC 9039 Sec-independent protein translocase subunit TatC YP_001833764.1 3081553 R 395963 CDS YP_001833765.1 182679619 6198548 complement(3082463..3082903) 1 NC_010581.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: xau:Xaut_4406 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 3082903 6198548 Bind_2704 Beijerinckia indica subsp. indica ATCC 9039 twin-arginine translocation protein subunit TatB YP_001833765.1 3082463 R 395963 CDS YP_001833766.1 182679620 6198547 complement(3083040..3083285) 1 NC_010581.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3083285 tatA 6198547 tatA Beijerinckia indica subsp. indica ATCC 9039 twin arginine translocase protein A YP_001833766.1 3083040 R 395963 CDS YP_001833767.1 182679621 6200186 3083663..3083902 1 NC_010581.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: xau:Xaut_4303 putative regulatory protein, FmdB family; FmdB family regulatory protein 3083902 6200186 Bind_2706 Beijerinckia indica subsp. indica ATCC 9039 FmdB family regulatory protein YP_001833767.1 3083663 D 395963 CDS YP_001833768.1 182679622 6200682 complement(3083946..3084704) 1 NC_010581.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rpd:RPD_2791 chromosome segregation and condensation protein ScpB; segregation and condensation protein B 3084704 6200682 Bind_2707 Beijerinckia indica subsp. indica ATCC 9039 segregation and condensation protein B YP_001833768.1 3083946 R 395963 CDS YP_001833769.1 182679623 6198965 complement(3084761..3085603) 1 NC_010581.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: rpe:RPE_2694 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 3085603 6198965 Bind_2708 Beijerinckia indica subsp. indica ATCC 9039 chromosome segregation and condensation protein ScpA YP_001833769.1 3084761 R 395963 CDS YP_001833770.1 182679624 6198946 complement(3085783..3087318) 1 NC_010581.1 PFAM: Sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain protein; sporulation domain-containing protein 3087318 6198946 Bind_2709 Beijerinckia indica subsp. indica ATCC 9039 sporulation domain-containing protein YP_001833770.1 3085783 R 395963 CDS YP_001833771.1 182679625 6198923 complement(3087773..3089545) 1 NC_010581.1 KEGG: nha:Nham_1758 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 3089545 6198923 Bind_2710 Beijerinckia indica subsp. indica ATCC 9039 arginyl-tRNA synthetase YP_001833771.1 3087773 R 395963 CDS YP_001833772.1 182679626 6198578 complement(3089714..3090934) 1 NC_010581.1 KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 3090934 6198578 Bind_2711 Beijerinckia indica subsp. indica ATCC 9039 deoxyguanosinetriphosphate triphosphohydrolase YP_001833772.1 3089714 R 395963 CDS YP_001833773.1 182679627 6199379 3091126..3091482 1 NC_010581.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azc:AZC_2808 HesB protein; iron-sulfur cluster assembly accessory protein 3091482 6199379 Bind_2712 Beijerinckia indica subsp. indica ATCC 9039 iron-sulfur cluster assembly accessory protein YP_001833773.1 3091126 D 395963 CDS YP_001833774.1 182679628 6199793 3091895..3093715 1 NC_010581.1 KEGG: mex:Mext_3391 hypothetical protein; hypothetical protein 3093715 6199793 Bind_2713 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833774.1 3091895 D 395963 CDS YP_001833775.1 182679629 6200396 3093828..3094061 1 NC_010581.1 hypothetical protein 3094061 6200396 Bind_2714 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833775.1 3093828 D 395963 CDS YP_001833776.1 182679630 6198820 complement(3094365..3094601) 1 NC_010581.1 hypothetical protein 3094601 6198820 Bind_2715 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833776.1 3094365 R 395963 CDS YP_001833777.1 182679631 6200302 complement(3094832..3095128) 1 NC_010581.1 hypothetical protein 3095128 6200302 Bind_2716 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833777.1 3094832 R 395963 CDS YP_001833778.1 182679632 6199305 complement(3095350..3097203) 1 NC_010581.1 KEGG: bra:BRADO2754 dihydroxyacid dehydratase (DAD); TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3097203 6199305 Bind_2717 Beijerinckia indica subsp. indica ATCC 9039 dihydroxy-acid dehydratase YP_001833778.1 3095350 R 395963 CDS YP_001833779.1 182679633 6199437 3097496..3098149 1 NC_010581.1 KEGG: mex:Mext_1120 hypothetical protein; hypothetical protein 3098149 6199437 Bind_2718 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833779.1 3097496 D 395963 CDS YP_001833780.1 182679634 6198448 complement(3098154..3098600) 1 NC_010581.1 KEGG: ret:RHE_CH01335 hypothetical protein; hypothetical protein 3098600 6198448 Bind_2719 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833780.1 3098154 R 395963 CDS YP_001833781.1 182679635 6198750 complement(3098731..3100026) 1 NC_010581.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3100026 6198750 Bind_2720 Beijerinckia indica subsp. indica ATCC 9039 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001833781.1 3098731 R 395963 CDS YP_001833782.1 182679636 6199701 complement(3100869..3102341) 1 NC_010581.1 KEGG: amr:AM1_E0108 hypothetical protein; hypothetical protein 3102341 6199701 Bind_2721 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833782.1 3100869 R 395963 CDS YP_001833783.1 182679637 6200965 3103152..3103568 1 NC_010581.1 hypothetical protein 3103568 6200965 Bind_2722 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833783.1 3103152 D 395963 CDS YP_001833784.1 182679638 6199683 complement(3103575..3104153) 1 NC_010581.1 KEGG: xau:Xaut_3172 hypothetical protein; hypothetical protein 3104153 6199683 Bind_2723 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833784.1 3103575 R 395963 CDS YP_001833785.1 182679639 6199801 complement(3104198..3106309) 1 NC_010581.1 KEGG: ngo:NGO0510 hypothetical protein, putative phage associated protein; putative phage associated protein 3106309 6199801 Bind_2724 Beijerinckia indica subsp. indica ATCC 9039 putative phage associated protein YP_001833785.1 3104198 R 395963 CDS YP_001833786.1 182679640 6201269 complement(3106306..3106770) 1 NC_010581.1 KEGG: ngo:NGO0508 hypothetical protein, putative phage associated protein; putative phage associated protein 3106770 6201269 Bind_2725 Beijerinckia indica subsp. indica ATCC 9039 putative phage associated protein YP_001833786.1 3106306 R 395963 CDS YP_001833787.1 182679641 6201181 complement(3106779..3107645) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: ngo:NGO0507 hypothetical protein, putative phage associated protein; hypothetical protein 3107645 6201181 Bind_2726 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833787.1 3106779 R 395963 CDS YP_001833788.1 182679642 6200516 complement(3107642..3108250) 1 NC_010581.1 KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein; putative phage associated protein 3108250 6200516 Bind_2727 Beijerinckia indica subsp. indica ATCC 9039 putative phage associated protein YP_001833788.1 3107642 R 395963 CDS YP_001833789.1 182679643 6201076 complement(3108285..3110543) 1 NC_010581.1 KEGG: rsq:Rsph17025_3714 hypothetical protein; hypothetical protein 3110543 6201076 Bind_2728 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833789.1 3108285 R 395963 CDS YP_001833790.1 182679644 6201865 complement(3111051..3111335) 1 NC_010581.1 KEGG: xau:Xaut_0128 hypothetical protein; hypothetical protein 3111335 6201865 Bind_2729 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833790.1 3111051 R 395963 CDS YP_001833791.1 182679645 6199058 3111597..3112928 1 NC_010581.1 PFAM: protein of unknown function DUF763; KEGG: bpt:Bpet1643 hypothetical protein; hypothetical protein 3112928 6199058 Bind_2730 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833791.1 3111597 D 395963 CDS YP_001833792.1 182679646 6199151 3113140..3113397 1 NC_010581.1 PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 protein of unknown function DUF343; hypothetical protein 3113397 6199151 Bind_2731 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833792.1 3113140 D 395963 CDS YP_001833793.1 182679647 6201085 3113517..3114362 1 NC_010581.1 PFAM: acyl-CoA thioesterase; KEGG: nwi:Nwi_0078 acyl-CoA thioesterase; palmitoyl-CoA hydrolase 3114362 6201085 Bind_2732 Beijerinckia indica subsp. indica ATCC 9039 palmitoyl-CoA hydrolase YP_001833793.1 3113517 D 395963 CDS YP_001833794.1 182679648 6200752 3114929..3115267 1 NC_010581.1 PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr0612 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 3115267 6200752 Bind_2733 Beijerinckia indica subsp. indica ATCC 9039 nitrogen regulatory protein P-II YP_001833794.1 3114929 D 395963 CDS YP_001833795.1 182679649 6200510 3115439..3116968 1 NC_010581.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter; ammonium transporter 3116968 6200510 Bind_2734 Beijerinckia indica subsp. indica ATCC 9039 ammonium transporter YP_001833795.1 3115439 D 395963 CDS YP_001833796.1 182679650 6201335 3117124..3118767 1 NC_010581.1 PFAM: phosphoglucose isomerase (PGI); KEGG: smd:Smed_0109 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 3118767 6201335 Bind_2735 Beijerinckia indica subsp. indica ATCC 9039 glucose-6-phosphate isomerase YP_001833796.1 3117124 D 395963 CDS YP_001833797.1 182679651 6201777 complement(3118865..3119674) 1 NC_010581.1 KEGG: nha:Nham_2267 tetratricopeptide TPR_2; hypothetical protein 3119674 6201777 Bind_2736 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833797.1 3118865 R 395963 CDS YP_001833798.1 182679652 6199212 complement(3119835..3120209) 1 NC_010581.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mex:Mext_1234 phosphocarrier, HPr family; phosphotransferase system, phosphocarrier protein HPr 3120209 6199212 Bind_2737 Beijerinckia indica subsp. indica ATCC 9039 phosphotransferase system, phosphocarrier protein HPr YP_001833798.1 3119835 R 395963 CDS YP_001833799.1 182679653 6199650 complement(3120210..3120611) 1 NC_010581.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 3120611 6199650 Bind_2738 Beijerinckia indica subsp. indica ATCC 9039 PTS system fructose subfamily transporter subunit IIA YP_001833799.1 3120210 R 395963 CDS YP_001833800.1 182679654 6201572 complement(3120986..3121444) 1 NC_010581.1 KEGG: mex:Mext_1236 HPr kinase; HPr kinase 3121444 6201572 Bind_2739 Beijerinckia indica subsp. indica ATCC 9039 HPr kinase YP_001833800.1 3120986 R 395963 CDS YP_001833801.1 182679655 6200238 complement(3121467..3123350) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: azc:AZC_4066 histidine kinase; integral membrane sensor signal transduction histidine kinase 3123350 6200238 Bind_2740 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001833801.1 3121467 R 395963 CDS YP_001833802.1 182679656 6199504 complement(3123483..3124178) 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA0358 two-component transcriptional regulator ChvI, winged helix family; two component transcriptional regulator 3124178 6199504 Bind_2741 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001833802.1 3123483 R 395963 CDS YP_001833803.1 182679657 6201429 3124997..3125779 1 NC_010581.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3125779 6201429 Bind_2742 Beijerinckia indica subsp. indica ATCC 9039 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001833803.1 3124997 D 395963 CDS YP_001833804.1 182679658 6198756 complement(3125787..3127139) 1 NC_010581.1 PFAM: Citrate transporter; KEGG: mlo:mlr4884 hypothetical protein; citrate transporter 3127139 6198756 Bind_2743 Beijerinckia indica subsp. indica ATCC 9039 citrate transporter YP_001833804.1 3125787 R 395963 CDS YP_001833805.1 182679659 6200686 complement(3127207..3130338) 1 NC_010581.1 KEGG: azc:AZC_4464 DNA polymerase A; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 3130338 6200686 Bind_2744 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase I YP_001833805.1 3127207 R 395963 CDS YP_001833806.1 182679660 6200406 complement(3130497..3130835) 1 NC_010581.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_1795 hypothetical protein; antibiotic biosynthesis monooxygenase 3130835 6200406 Bind_2745 Beijerinckia indica subsp. indica ATCC 9039 antibiotic biosynthesis monooxygenase YP_001833806.1 3130497 R 395963 CDS YP_001833807.1 182679661 6200192 complement(3130943..3131722) 1 NC_010581.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc01850 hypothetical protein; lytic transglycosylase 3131722 6200192 Bind_2746 Beijerinckia indica subsp. indica ATCC 9039 lytic transglycosylase YP_001833807.1 3130943 R 395963 CDS YP_001833808.1 182679662 6200532 complement(3131933..3132712) 1 NC_010581.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: atc:AGR_C_4790 succinate dehydrogenase iron-sulfur protein subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 3132712 6200532 Bind_2747 Beijerinckia indica subsp. indica ATCC 9039 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001833808.1 3131933 R 395963 CDS YP_001833809.1 182679663 6199930 complement(3132926..3133378) 1 NC_010581.1 KEGG: rpe:RPE_0513 hypothetical protein; hypothetical protein 3133378 6199930 Bind_2748 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833809.1 3132926 R 395963 CDS YP_001833810.1 182679664 6200394 complement(3133547..3135385) 1 NC_010581.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3135385 sdhA 6200394 sdhA Beijerinckia indica subsp. indica ATCC 9039 succinate dehydrogenase flavoprotein subunit YP_001833810.1 3133547 R 395963 CDS YP_001833811.1 182679665 6201013 complement(3135434..3135826) 1 NC_010581.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bme:BMEI0160 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein 3135826 6201013 Bind_2750 Beijerinckia indica subsp. indica ATCC 9039 succinate dehydrogenase, hydrophobic membrane anchor protein YP_001833811.1 3135434 R 395963 CDS YP_001833812.1 182679666 6201014 complement(3135991..3136404) 1 NC_010581.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: nwi:Nwi_2798 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 3136404 6201014 Bind_2751 Beijerinckia indica subsp. indica ATCC 9039 succinate dehydrogenase, cytochrome b556 subunit YP_001833812.1 3135991 R 395963 CDS YP_001833813.1 182679667 6199565 3136931..3137860 1 NC_010581.1 PFAM: phospholipase/Carboxylesterase; KEGG: bbt:BBta_3217 hypothetical protein; phospholipase/carboxylesterase 3137860 6199565 Bind_2752 Beijerinckia indica subsp. indica ATCC 9039 phospholipase/carboxylesterase YP_001833813.1 3136931 D 395963 CDS YP_001833814.1 182679668 6199566 complement(3137927..3139228) 1 NC_010581.1 KEGG: dar:Daro_2929 hypothetical protein; hypothetical protein 3139228 6199566 Bind_2753 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833814.1 3137927 R 395963 CDS YP_001833815.1 182679669 6198900 complement(3139455..3139751) 1 NC_010581.1 KEGG: nha:Nham_0883 hypothetical protein; hypothetical protein 3139751 6198900 Bind_2754 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833815.1 3139455 R 395963 CDS YP_001833816.1 182679670 6198901 complement(3139748..3140557) 1 NC_010581.1 KEGG: nha:Nham_0882 hypothetical protein; hypothetical protein 3140557 6198901 Bind_2755 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833816.1 3139748 R 395963 CDS YP_001833817.1 182679671 6201385 3141578..3143971 1 NC_010581.1 PFAM: Domain of unknown function DUF1929; KEGG: bps:BPSL1707 putative exported oxidase; galactose oxidase 3143971 6201385 Bind_2756 Beijerinckia indica subsp. indica ATCC 9039 galactose oxidase YP_001833817.1 3141578 D 395963 CDS YP_001833818.1 182679672 6201386 3144261..3145463 1 NC_010581.1 PFAM: glycosyl transferase group 1; KEGG: rde:RD1_3845 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 3145463 6201386 Bind_2757 Beijerinckia indica subsp. indica ATCC 9039 group 1 glycosyl transferase YP_001833818.1 3144261 D 395963 CDS YP_001833819.1 182679673 6201387 3145450..3146496 1 NC_010581.1 KEGG: sil:SPO0036 hypothetical protein; hypothetical protein 3146496 6201387 Bind_2758 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833819.1 3145450 D 395963 CDS YP_001833820.1 182679674 6201741 3146493..3147806 1 NC_010581.1 PFAM: glycoside hydrolase family 5; KEGG: amr:AM1_1890 hypothetical protein; glycoside hydrolase family protein 3147806 6201741 Bind_2759 Beijerinckia indica subsp. indica ATCC 9039 glycoside hydrolase family protein YP_001833820.1 3146493 D 395963 CDS YP_001833821.1 182679675 6201742 3147803..3149266 1 NC_010581.1 KEGG: cno:NT01CX_1531 hypothetical protein; hypothetical protein 3149266 6201742 Bind_2760 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833821.1 3147803 D 395963 CDS YP_001833822.1 182679676 6201743 3149396..3149980 1 NC_010581.1 KEGG: bja:bll2363 hypothetical protein; hypothetical protein 3149980 6201743 Bind_2761 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833822.1 3149396 D 395963 CDS YP_001833823.1 182679677 6201584 3150045..3152291 1 NC_010581.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:bll2362 succinoglycan biosynthesis transport protein; lipopolysaccharide biosynthesis protein 3152291 6201584 Bind_2762 Beijerinckia indica subsp. indica ATCC 9039 lipopolysaccharide biosynthesis protein YP_001833823.1 3150045 D 395963 CDS YP_001833824.1 182679678 6201585 3152380..3153354 1 NC_010581.1 KEGG: rsp:RSP_2396 hypothetical protein; hypothetical protein 3153354 6201585 Bind_2763 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833824.1 3152380 D 395963 CDS YP_001833825.1 182679679 6201586 3153544..3154797 1 NC_010581.1 KEGG: xau:Xaut_3565 polysaccharide biosynthesis protein; hypothetical protein 3154797 6201586 Bind_2764 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833825.1 3153544 D 395963 CDS YP_001833826.1 182679680 6199429 3155378..3156559 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmt:BSUIS_A0575 oxidoreductase domain protein; oxidoreductase domain-containing protein 3156559 6199429 Bind_2765 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase domain-containing protein YP_001833826.1 3155378 D 395963 CDS YP_001833827.1 182679681 6199430 complement(3156640..3157650) 1 NC_010581.1 PFAM: regulatory protein LacI; KEGG: rle:pRL110623 putative transcriptional regulator; LacI family transcriptional regulator 3157650 6199430 Bind_2766 Beijerinckia indica subsp. indica ATCC 9039 LacI family transcriptional regulator YP_001833827.1 3156640 R 395963 CDS YP_001833828.1 182679682 6199431 3157962..3159053 1 NC_010581.1 PFAM: fatty acid desaturase; KEGG: mlo:mlr4998 putative hydrocarbon oxygenase MocD; fatty acid desaturase 3159053 6199431 Bind_2767 Beijerinckia indica subsp. indica ATCC 9039 fatty acid desaturase YP_001833828.1 3157962 D 395963 CDS YP_001833829.1 182679683 6198595 3159146..3159475 1 NC_010581.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: smd:Smed_5006 Rieske (2Fe-2S) domain protein, MocE subfamily; Rieske (2Fe-2S) domain-containing protein 3159475 6198595 Bind_2768 Beijerinckia indica subsp. indica ATCC 9039 Rieske (2Fe-2S) domain-containing protein YP_001833829.1 3159146 D 395963 CDS YP_001833830.1 182679684 6198596 3159623..3160612 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: sus:Acid_5923 aldo/keto reductase; aldo/keto reductase 3160612 6198596 Bind_2769 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001833830.1 3159623 D 395963 CDS YP_001833831.1 182679685 6198597 3160615..3161436 1 NC_010581.1 KEGG: lmo:lmo1968 hypothetical protein; hypothetical protein 3161436 6198597 Bind_2770 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833831.1 3160615 D 395963 CDS YP_001833832.1 182679686 6200691 3161532..3162476 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_2900 putative rhizopine-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 3162476 6200691 Bind_2771 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833832.1 3161532 D 395963 CDS YP_001833833.1 182679687 6200692 3162674..3163588 1 NC_010581.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:RL1417 putative IolH myo-inositol catabolism protein; xylose isomerase domain-containing protein 3163588 6200692 Bind_2772 Beijerinckia indica subsp. indica ATCC 9039 xylose isomerase domain-containing protein YP_001833833.1 3162674 D 395963 CDS YP_001833834.1 182679688 6200693 3164011..3165462 1 NC_010581.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3165462 6200693 Bind_2773 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit beta YP_001833834.1 3164011 D 395963 CDS YP_001833835.1 182679689 6201641 3165459..3165920 1 NC_010581.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 3165920 6201641 Bind_2774 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit epsilon YP_001833835.1 3165459 D 395963 CDS YP_001833836.1 182679690 6201642 3165953..3166207 1 NC_010581.1 KEGG: bxe:Bxe_A1881 putative H(+)-transporting ATP synthase, gene 1 protein; putative H(+)-transporting ATP synthase, gene 1 protein 3166207 6201642 Bind_2775 Beijerinckia indica subsp. indica ATCC 9039 putative H(+)-transporting ATP synthase, gene 1 protein YP_001833836.1 3165953 D 395963 CDS YP_001833837.1 182679691 6201643 3166281..3166973 1 NC_010581.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3166973 6201643 Bind_2776 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit A YP_001833837.1 3166281 D 395963 CDS YP_001833838.1 182679692 6201749 3166970..3167230 1 NC_010581.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3167230 6201749 Bind_2777 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit C YP_001833838.1 3166970 D 395963 CDS YP_001833839.1 182679693 6201750 3167244..3168023 1 NC_010581.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bxe:Bxe_C0044 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 3168023 6201750 Bind_2778 Beijerinckia indica subsp. indica ATCC 9039 H+transporting two-sector ATPase subunit B/B' YP_001833839.1 3167244 D 395963 CDS YP_001833840.1 182679694 6201751 3168020..3169534 1 NC_010581.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3169534 6201751 Bind_2779 Beijerinckia indica subsp. indica ATCC 9039 F0F1 ATP synthase subunit alpha YP_001833840.1 3168020 D 395963 CDS YP_001833841.1 182679695 6201425 3169531..3170406 1 NC_010581.1 PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: bxe:Bxe_C0042 H+-transporting two-sector ATPase, gamma subunit; H+transporting two-sector ATPase subunit gamma 3170406 6201425 Bind_2780 Beijerinckia indica subsp. indica ATCC 9039 H+transporting two-sector ATPase subunit gamma YP_001833841.1 3169531 D 395963 CDS YP_001833842.1 182679696 6201663 complement(3171866..3172615) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smd:Smed_5828 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3172615 6201663 Bind_2783 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833842.1 3171866 R 395963 CDS YP_001833843.1 182679697 6201664 3172710..3173606 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_5829 transcriptional regulator, LysR family; LysR family transcriptional regulator 3173606 6201664 Bind_2784 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833843.1 3172710 D 395963 CDS YP_001833844.1 182679698 6201665 complement(3173674..3174609) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3225 putative LysR family transcriptional regulator; LysR family transcriptional regulator 3174609 6201665 Bind_2785 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833844.1 3173674 R 395963 CDS YP_001833845.1 182679699 6201610 3174738..3175217 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rle:RL3226 hypothetical protein; alkylhydroperoxidase 3175217 6201610 Bind_2786 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001833845.1 3174738 D 395963 CDS YP_001833846.1 182679700 6201611 3175349..3176266 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: atc:AGR_L_1113 hypothetical protein; beta-lactamase domain-containing protein 3176266 6201611 Bind_2787 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001833846.1 3175349 D 395963 CDS YP_001833847.1 182679701 6201721 3176531..3176956 1 NC_010581.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20864 hypothetical protein; cupin 3176956 6201721 Bind_2789 Beijerinckia indica subsp. indica ATCC 9039 cupin YP_001833847.1 3176531 D 395963 CDS YP_001833848.1 182679702 6201722 3177034..3178041 1 NC_010581.1 PFAM: MscS Mechanosensitive ion channel; KEGG: smd:Smed_5823 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 3178041 6201722 Bind_2790 Beijerinckia indica subsp. indica ATCC 9039 MscS mechanosensitive ion channel YP_001833848.1 3177034 D 395963 CDS YP_001833849.1 182679703 6201723 complement(3177992..3178480) 1 NC_010581.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bpt:Bpet3860 probable RF2 family protein; BadM/Rrf2 family transcriptional regulator 3178480 6201723 Bind_2791 Beijerinckia indica subsp. indica ATCC 9039 BadM/Rrf2 family transcriptional regulator YP_001833849.1 3177992 R 395963 CDS YP_001833850.1 182679704 6201457 3179216..3180139 1 NC_010581.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: xau:Xaut_1982 thioredoxin; thioredoxin 3180139 6201457 Bind_2792 Beijerinckia indica subsp. indica ATCC 9039 thioredoxin YP_001833850.1 3179216 D 395963 CDS YP_001833851.1 182679705 6199736 3180423..3181091 1 NC_010581.1 PFAM: peptidase S16 lon domain protein; KEGG: mex:Mext_2252 peptidase S16 lon domain protein; peptidase S16 lon domain-containing protein 3181091 6199736 Bind_2793 Beijerinckia indica subsp. indica ATCC 9039 peptidase S16 lon domain-containing protein YP_001833851.1 3180423 D 395963 CDS YP_001833852.1 182679706 6199737 complement(3181192..3181716) 1 NC_010581.1 hypothetical protein 3181716 6199737 Bind_2794 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833852.1 3181192 R 395963 CDS YP_001833853.1 182679707 6199738 complement(3182040..3182462) 1 NC_010581.1 PFAM: PilT protein domain protein; KEGG: rpc:RPC_4151 PilT protein-like; PilT domain-containing protein 3182462 6199738 Bind_2795 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001833853.1 3182040 R 395963 CDS YP_001833854.1 182679708 6200133 complement(3182459..3182743) 1 NC_010581.1 KEGG: bxe:Bxe_B1881 plasmid stability protein; plasmid stability protein 3182743 6200133 Bind_2796 Beijerinckia indica subsp. indica ATCC 9039 plasmid stability protein YP_001833854.1 3182459 R 395963 CDS YP_001833855.1 182679709 6200134 3183149..3183721 1 NC_010581.1 hypothetical protein 3183721 6200134 Bind_2797 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833855.1 3183149 D 395963 CDS YP_001833856.1 182679710 6200135 3183714..3186281 1 NC_010581.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bra:BRADO4942 hypothetical protein; putative CbxX/CfqX family protein (N-term) and peptidase (C-term); ATPase central domain-containing protein 3186281 6200135 Bind_2798 Beijerinckia indica subsp. indica ATCC 9039 ATPase central domain-containing protein YP_001833856.1 3183714 D 395963 CDS YP_001833857.1 182679711 6201638 3186369..3187169 1 NC_010581.1 hypothetical protein 3187169 6201638 Bind_2799 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833857.1 3186369 D 395963 CDS YP_001833858.1 182679712 6201639 3187333..3188097 1 NC_010581.1 KEGG: nha:Nham_3767 hypothetical protein; hypothetical protein 3188097 6201639 Bind_2800 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833858.1 3187333 D 395963 CDS YP_001833859.1 182679713 6201640 3188189..3189547 1 NC_010581.1 KEGG: acr:Acry_3293 nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein; DNA repair nucleotidyltransferase/DNA polymerase-like protein 3189547 6201640 Bind_2801 Beijerinckia indica subsp. indica ATCC 9039 DNA repair nucleotidyltransferase/DNA polymerase-like protein YP_001833859.1 3188189 D 395963 CDS YP_001833860.1 182679714 6200419 3189544..3192816 1 NC_010581.1 KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3192816 6200419 Bind_2802 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunit alpha YP_001833860.1 3189544 D 395963 CDS YP_001833861.1 182679715 6200420 3192840..3193283 1 NC_010581.1 PFAM: Protein of unknown function DUF1810; KEGG: rru:Rru_A3158 hypothetical protein; hypothetical protein 3193283 6200420 Bind_2803 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833861.1 3192840 D 395963 CDS YP_001833862.1 182679716 6200421 3193433..3194323 1 NC_010581.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: oan:Oant_4217 chemotaxis MotA protein; MotA/TolQ/ExbB proton channel 3194323 6200421 Bind_2804 Beijerinckia indica subsp. indica ATCC 9039 MotA/TolQ/ExbB proton channel YP_001833862.1 3193433 D 395963 CDS YP_001833863.1 182679717 6199936 3194328..3195269 1 NC_010581.1 PFAM: flagellar motor switch protein FliM; KEGG: azc:AZC_0643 flagellar motor switch protein; flagellar motor switch protein FliM 3195269 6199936 Bind_2805 Beijerinckia indica subsp. indica ATCC 9039 flagellar motor switch protein FliM YP_001833863.1 3194328 D 395963 CDS YP_001833864.1 182679718 6199937 3195360..3195689 1 NC_010581.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bja:bll6879 probable flagellar motor switch protein; flagellar motor switch protein FliN 3195689 6199937 Bind_2806 Beijerinckia indica subsp. indica ATCC 9039 flagellar motor switch protein FliN YP_001833864.1 3195360 D 395963 CDS YP_001833865.1 182679719 6199938 3195692..3196726 1 NC_010581.1 PFAM: flagellar motor switch protein FliG; KEGG: azc:AZC_0640 flagellar motor switch protein; flagellar motor switch protein FliG 3196726 6199938 Bind_2807 Beijerinckia indica subsp. indica ATCC 9039 flagellar motor switch protein FliG YP_001833865.1 3195692 D 395963 CDS YP_001833866.1 182679720 6199652 3196964..3198046 1 NC_010581.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3198046 flhB 6199652 flhB Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis protein FlhB YP_001833866.1 3196964 D 395963 CDS YP_001833867.1 182679721 6199653 3198276..3199055 1 NC_010581.1 PFAM: protein of unknown function DUF1217; KEGG: bov:BOV_A0118 hypothetical protein; hypothetical protein 3199055 6199653 Bind_2809 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833867.1 3198276 D 395963 CDS YP_001833868.1 182679722 6199654 3199059..3199781 1 NC_010581.1 KEGG: rpe:RPE_1147 flagellar basal body rod protein; flagellar basal body rod protein 3199781 6199654 Bind_2810 Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body rod protein YP_001833868.1 3199059 D 395963 CDS YP_001833869.1 182679723 6201516 3199955..3201283 1 NC_010581.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3201283 fliI 6201516 fliI Beijerinckia indica subsp. indica ATCC 9039 flagellum-specific ATP synthase YP_001833869.1 3199955 D 395963 CDS YP_001833870.1 182679724 6201517 complement(3201587..3204685) 1 NC_010581.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3204685 6201517 Bind_2812 Beijerinckia indica subsp. indica ATCC 9039 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001833870.1 3201587 R 395963 CDS YP_001833871.1 182679725 6201518 complement(3204801..3205712) 1 NC_010581.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sen:SACE_3360 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 3205712 6201518 Bind_2813 Beijerinckia indica subsp. indica ATCC 9039 arginase/agmatinase/formiminoglutamase YP_001833871.1 3204801 R 395963 CDS YP_001833872.1 182679726 6201058 complement(3205709..3206947) 1 NC_010581.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A2115 putative bifunctional arginase/ornithine aminotransferase; ornithine aminotransferase 3206947 6201058 Bind_2814 Beijerinckia indica subsp. indica ATCC 9039 ornithine aminotransferase YP_001833872.1 3205709 R 395963 CDS YP_001833873.1 182679727 6201059 3207141..3207641 1 NC_010581.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: pde:Pden_4957 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3207641 6201059 Bind_2815 Beijerinckia indica subsp. indica ATCC 9039 AsnC family transcriptional regulator YP_001833873.1 3207141 D 395963 CDS YP_001833874.1 182679728 6201060 3207794..3208360 1 NC_010581.1 KEGG: pfl:PFL_4129 hypothetical protein; hypothetical protein 3208360 6201060 Bind_2816 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833874.1 3207794 D 395963 CDS YP_001833875.1 182679729 6201737 complement(3208519..3209292) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I2817 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3209292 6201737 Bind_2817 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833875.1 3208519 R 395963 CDS YP_001833876.1 182679730 6201738 3209430..3210380 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_999 hypothetical protein; LysR family transcriptional regulator 3210380 6201738 Bind_2818 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001833876.1 3209430 D 395963 CDS YP_001833877.1 182679731 6201739 3210561..3210956 1 NC_010581.1 KEGG: tcr:510807.10 mucin TcMUCII, putative Pfam: Mucin PROSITE: THR_RICH; hypothetical protein 3210956 6201739 Bind_2819 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833877.1 3210561 D 395963 CDS YP_001833878.1 182679732 6201417 3210972..3213590 1 NC_010581.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 3213590 6201417 Bind_2820 Beijerinckia indica subsp. indica ATCC 9039 heavy metal translocating P-type ATPase YP_001833878.1 3210972 D 395963 CDS YP_001833879.1 182679733 6201418 complement(3213698..3215428) 1 NC_010581.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3215428 6201418 Bind_2821 Beijerinckia indica subsp. indica ATCC 9039 dihydroxy-acid dehydratase YP_001833879.1 3213698 R 395963 CDS YP_001833880.1 182679734 6201419 complement(3215591..3216607) 1 NC_010581.1 PFAM: inner-membrane translocator; KEGG: smd:Smed_4266 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3216607 6201419 Bind_2822 Beijerinckia indica subsp. indica ATCC 9039 monosaccharide-transporting ATPase YP_001833880.1 3215591 R 395963 CDS YP_001833881.1 182679735 6199156 complement(3216653..3218188) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20713 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 3218188 6199156 Bind_2823 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833881.1 3216653 R 395963 CDS YP_001833882.1 182679736 6199157 complement(3218246..3219091) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 3219091 6199157 Bind_2824 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833882.1 3218246 R 395963 CDS YP_001833883.1 182679737 6199158 complement(3219228..3220403) 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsh:Rsph17029_2906 oxidoreductase domain protein; oxidoreductase domain-containing protein 3220403 6199158 Bind_2825 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase domain-containing protein YP_001833883.1 3219228 R 395963 CDS YP_001833884.1 182679738 6199010 complement(3220400..3221536) 1 NC_010581.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bra:BRADO0446 conserved hypothetical protein; putative xylose isomerase-like; xylose isomerase domain-containing protein 3221536 6199010 Bind_2826 Beijerinckia indica subsp. indica ATCC 9039 xylose isomerase domain-containing protein YP_001833884.1 3220400 R 395963 CDS YP_001833885.1 182679739 6199011 complement(3221536..3222657) 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2330 oxidoreductase domain protein; oxidoreductase domain-containing protein 3222657 6199011 Bind_2827 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase domain-containing protein YP_001833885.1 3221536 R 395963 CDS YP_001833886.1 182679740 6199012 complement(3222703..3223695) 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2329 inositol 2-dehydrogenase; inositol 2-dehydrogenase 3223695 6199012 Bind_2828 Beijerinckia indica subsp. indica ATCC 9039 inositol 2-dehydrogenase YP_001833886.1 3222703 R 395963 CDS YP_001833887.1 182679741 6201660 complement(3223946..3224941) 1 NC_010581.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: acr:Acry_2328 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3224941 6201660 Bind_2829 Beijerinckia indica subsp. indica ATCC 9039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001833887.1 3223946 R 395963 CDS YP_001833888.1 182679742 6201661 complement(3224943..3225764) 1 NC_010581.1 PFAM: HpcH/HpaI aldolase; KEGG: acr:Acry_2327 HpcH/HpaI aldolase; HpcH/HpaI aldolase 3225764 6201661 Bind_2830 Beijerinckia indica subsp. indica ATCC 9039 HpcH/HpaI aldolase YP_001833888.1 3224943 R 395963 CDS YP_001833889.1 182679743 6201662 complement(3225776..3227212) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pub:SAR11_0766 succinate-semialdehyde dehydrogenase (NAD(P)); aldehyde dehydrogenase 3227212 6201662 Bind_2831 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001833889.1 3225776 R 395963 CDS YP_001833890.1 182679744 6198991 3227552..3228292 1 NC_010581.1 PFAM: protein of unknown function DUF81; KEGG: xau:Xaut_0652 protein of unknown function DUF81; hypothetical protein 3228292 6198991 Bind_2832 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833890.1 3227552 D 395963 CDS YP_001833891.1 182679745 6198992 3228539..3229474 1 NC_010581.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: acr:Acry_2326 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3229474 6198992 Bind_2833 Beijerinckia indica subsp. indica ATCC 9039 RpiR family transcriptional regulator YP_001833891.1 3228539 D 395963 CDS YP_001833892.1 182679746 6198993 3229588..3231429 1 NC_010581.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ppr:PBPRB0462 hypothetical acetolactate synthase, IolD; thiamine pyrophosphate protein central region 3231429 6198993 Bind_2834 Beijerinckia indica subsp. indica ATCC 9039 thiamine pyrophosphate protein central region YP_001833892.1 3229588 D 395963 CDS YP_001833893.1 182679747 6201576 3231548..3232480 1 NC_010581.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: acr:Acry_2325 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3232480 6201576 Bind_2835 Beijerinckia indica subsp. indica ATCC 9039 xylose isomerase domain-containing protein YP_001833893.1 3231548 D 395963 CDS YP_001833894.1 182679748 6201577 3232461..3233270 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_2324 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3233270 6201577 Bind_2836 Beijerinckia indica subsp. indica ATCC 9039 short chain dehydrogenase YP_001833894.1 3232461 D 395963 CDS YP_001833895.1 182679749 6201578 3233584..3234513 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 3234513 6201578 Bind_2837 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833895.1 3233584 D 395963 CDS YP_001833896.1 182679750 6199434 3234773..3236140 1 NC_010581.1 PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB 3236140 6199434 Bind_2838 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate-selective porin OprB YP_001833896.1 3234773 D 395963 CDS YP_001833897.1 182679751 6199435 complement(3236326..3236823) 1 NC_010581.1 KEGG: bja:bll5176 hypothetical protein; hypothetical protein 3236823 6199435 Bind_2839 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833897.1 3236326 R 395963 CDS YP_001833898.1 182679752 6199436 complement(3237077..3237748) 1 NC_010581.1 PFAM: chromosome segregation and condensation protein ScpB; KEGG: nha:Nham_4583 putative transcriptional regulator; chromosome segregation and condensation protein ScpB 3237748 6199436 Bind_2840 Beijerinckia indica subsp. indica ATCC 9039 chromosome segregation and condensation protein ScpB YP_001833898.1 3237077 R 395963 CDS YP_001833899.1 182679753 6199416 complement(3237751..3238746) 1 NC_010581.1 PFAM: protein of unknown function DUF1403; KEGG: nha:Nham_4582 protein of unknown function DUF1403; hypothetical protein 3238746 6199416 Bind_2841 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833899.1 3237751 R 395963 CDS YP_001833900.1 182679754 6199417 complement(3238873..3241692) 1 NC_010581.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: mex:Mext_1457 hypothetical protein; hypothetical protein 3241692 6199417 Bind_2842 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833900.1 3238873 R 395963 CDS YP_001833901.1 182679755 6199418 complement(3241692..3242630) 1 NC_010581.1 KEGG: mex:Mext_1458 protein of unknown function DUF58; hypothetical protein 3242630 6199418 Bind_2843 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833901.1 3241692 R 395963 CDS YP_001833902.1 182679756 6200672 complement(3242635..3243636) 1 NC_010581.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: azc:AZC_3509 putative methanol dehydrogenase regulator; ATPase 3243636 6200672 Bind_2844 Beijerinckia indica subsp. indica ATCC 9039 ATPase YP_001833902.1 3242635 R 395963 CDS YP_001833903.1 182679757 6200673 3243957..3244583 1 NC_010581.1 PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein; hypothetical protein 3244583 6200673 Bind_2845 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833903.1 3243957 D 395963 CDS YP_001833904.1 182679758 6200674 3244667..3245920 1 NC_010581.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: azc:AZC_3505 putative poly(A) polymerase; polynucleotide adenylyltransferase 3245920 6200674 Bind_2846 Beijerinckia indica subsp. indica ATCC 9039 polynucleotide adenylyltransferase YP_001833904.1 3244667 D 395963 CDS YP_001833905.1 182679759 6198721 complement(3246109..3246471) 1 NC_010581.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mca:MCA0225 Rieske 2Fe-2S family protein; Rieske (2Fe-2S) domain-containing protein 3246471 6198721 Bind_2847 Beijerinckia indica subsp. indica ATCC 9039 Rieske (2Fe-2S) domain-containing protein YP_001833905.1 3246109 R 395963 CDS YP_001833906.1 182679760 6198722 3246832..3247617 1 NC_010581.1 KEGG: azc:AZC_1519 putative macrocin-O-methyltransferase domain protein; macrocin-O-methyltransferase domain-containing protein 3247617 6198722 Bind_2848 Beijerinckia indica subsp. indica ATCC 9039 macrocin-O-methyltransferase domain-containing protein YP_001833906.1 3246832 D 395963 CDS YP_001833907.1 182679761 6198723 3248024..3249178 1 NC_010581.1 PFAM: acyltransferase 3; KEGG: mxa:MXAN_3238 acyltransferase family protein; acyltransferase 3 3249178 6198723 Bind_2849 Beijerinckia indica subsp. indica ATCC 9039 acyltransferase 3 YP_001833907.1 3248024 D 395963 CDS YP_001833908.1 182679762 6200261 complement(3249175..3250419) 1 NC_010581.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3250419 6200261 Bind_2850 Beijerinckia indica subsp. indica ATCC 9039 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001833908.1 3249175 R 395963 CDS YP_001833909.1 182679763 6200262 complement(3250659..3251033) 1 NC_010581.1 PFAM: protein of unknown function DUF779; KEGG: gbe:GbCGDNIH1_1023 hypothetical protein; hypothetical protein 3251033 6200262 Bind_2851 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833909.1 3250659 R 395963 CDS YP_001833910.1 182679764 6200263 complement(3251130..3252650) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: gbe:GbCGDNIH1_1022 aldehyde dehydrogenase; aldehyde dehydrogenase 3252650 6200263 Bind_2852 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001833910.1 3251130 R 395963 CDS YP_001833911.1 182679765 6198729 complement(3253192..3254100) 1 NC_010581.1 KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 3254100 6198729 Bind_2853 Beijerinckia indica subsp. indica ATCC 9039 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001833911.1 3253192 R 395963 CDS YP_001833912.1 182679766 6198730 3254334..3255359 1 NC_010581.1 TIGRFAM: TonB family protein; KEGG: rru:Rru_A2153 TonB-like; TonB family protein 3255359 6198730 Bind_2854 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001833912.1 3254334 D 395963 CDS YP_001833913.1 182679767 6198731 complement(3255387..3255881) 1 NC_010581.1 KEGG: pen:PSEEN4434 hypothetical protein; hypothetical protein 3255881 6198731 Bind_2855 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833913.1 3255387 R 395963 CDS YP_001833914.1 182679768 6199460 complement(3256219..3257643) 1 NC_010581.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: xau:Xaut_1067 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3257643 6199460 Bind_2856 Beijerinckia indica subsp. indica ATCC 9039 peptidase S8/S53 subtilisin kexin sedolisin YP_001833914.1 3256219 R 395963 CDS YP_001833915.1 182679769 6199461 complement(3258224..3259921) 1 NC_010581.1 KEGG: gvi:gll4244 unknown protein; hypothetical protein 3259921 6199461 Bind_2857 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833915.1 3258224 R 395963 CDS YP_001833916.1 182679770 6199462 complement(3260193..3261626) 1 NC_010581.1 KEGG: reh:H16_A3602 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 3261626 6199462 Bind_2858 Beijerinckia indica subsp. indica ATCC 9039 pyruvate kinase YP_001833916.1 3260193 R 395963 CDS YP_001833917.1 182679771 6200525 complement(3261685..3263307) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: bmu:Bmul_5161 aldehyde dehydrogenase; aldehyde dehydrogenase 3263307 6200525 Bind_2859 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001833917.1 3261685 R 395963 CDS YP_001833918.1 182679772 6200526 complement(3263483..3264847) 1 NC_010581.1 PFAM: Carbohydrate-selective porin OprB; KEGG: psb:Psyr_1117 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 3264847 6200526 Bind_2860 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate-selective porin OprB YP_001833918.1 3263483 R 395963 CDS YP_001833919.1 182679773 6200527 complement(3264953..3265882) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 3265882 6200527 Bind_2861 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001833919.1 3264953 R 395963 CDS YP_001833920.1 182679774 6198620 complement(3265956..3266993) 1 NC_010581.1 PFAM: inner-membrane translocator; KEGG: pin:Ping_2807 inner-membrane translocator; monosaccharide-transporting ATPase 3266993 6198620 Bind_2862 Beijerinckia indica subsp. indica ATCC 9039 monosaccharide-transporting ATPase YP_001833920.1 3265956 R 395963 CDS YP_001833921.1 182679775 6198621 complement(3267048..3268604) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpd:BURPS668_A0286 ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein; ABC transporter-like protein 3268604 6198621 Bind_2863 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001833921.1 3267048 R 395963 CDS YP_001833922.1 182679776 6198622 3269027..3270262 1 NC_010581.1 PFAM: ROK family protein; KEGG: rle:RL0488 putative ROK family transcriptional regulator; ROK family protein 3270262 6198622 Bind_2864 Beijerinckia indica subsp. indica ATCC 9039 ROK family protein YP_001833922.1 3269027 D 395963 CDS YP_001833923.1 182679777 6201510 3270256..3270708 1 NC_010581.1 PFAM: RbsD or FucU transport; KEGG: xau:Xaut_2417 RbsD or FucU transport; transport protein RbsD/FucU 3270708 6201510 Bind_2865 Beijerinckia indica subsp. indica ATCC 9039 transport protein RbsD/FucU YP_001833923.1 3270256 D 395963 CDS YP_001833924.1 182679778 6201511 3270705..3271673 1 NC_010581.1 PFAM: PfkB domain protein; KEGG: xau:Xaut_2416 PfkB domain protein; ribokinase-like domain-containing protein 3271673 6201511 Bind_2866 Beijerinckia indica subsp. indica ATCC 9039 ribokinase-like domain-containing protein YP_001833924.1 3270705 D 395963 CDS YP_001833925.1 182679779 6201512 3271970..3273448 1 NC_010581.1 KEGG: azc:AZC_3629 glucose-6-phosphate dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 3273448 6201512 Bind_2867 Beijerinckia indica subsp. indica ATCC 9039 glucose-6-phosphate 1-dehydrogenase YP_001833925.1 3271970 D 395963 CDS YP_001833926.1 182679780 6198185 3273555..3275396 1 NC_010581.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3275396 6198185 Bind_2868 Beijerinckia indica subsp. indica ATCC 9039 phosphogluconate dehydratase YP_001833926.1 3273555 D 395963 CDS YP_001833927.1 182679781 6198186 3275393..3276052 1 NC_010581.1 KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 3276052 6198186 Bind_2869 Beijerinckia indica subsp. indica ATCC 9039 2-dehydro-3-deoxyphosphogluconate aldolase YP_001833927.1 3275393 D 395963 CDS YP_001833928.1 182679782 6198187 complement(3276276..3276929) 1 NC_010581.1 KEGG: pnu:Pnuc_1366 hypothetical protein; hypothetical protein 3276929 6198187 Bind_2870 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833928.1 3276276 R 395963 CDS YP_001833929.1 182679783 6198188 complement(3277140..3277823) 1 NC_010581.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 3277823 6198188 Bind_2871 Beijerinckia indica subsp. indica ATCC 9039 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_001833929.1 3277140 R 395963 CDS YP_001833930.1 182679784 6198189 complement(3277820..3278794) 1 NC_010581.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bbt:BBta_2068 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase 3278794 6198189 Bind_2872 Beijerinckia indica subsp. indica ATCC 9039 2-keto-3-deoxy-galactonokinase YP_001833930.1 3277820 R 395963 CDS YP_001833931.1 182679785 6198190 complement(3278899..3279708) 1 NC_010581.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: jan:Jann_3839 transcriptional regulator, IclR family; IclR family transcriptional regulator 3279708 6198190 Bind_2873 Beijerinckia indica subsp. indica ATCC 9039 IclR family transcriptional regulator YP_001833931.1 3278899 R 395963 CDS YP_001833932.1 182679786 6201713 3279894..3281201 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL110019 putative transmembrane transporter; major facilitator transporter 3281201 6201713 Bind_2874 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001833932.1 3279894 D 395963 CDS YP_001833933.1 182679787 6201714 3281361..3283160 1 NC_010581.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3283160 6201714 Bind_2875 Beijerinckia indica subsp. indica ATCC 9039 dihydroxy-acid dehydratase YP_001833933.1 3281361 D 395963 CDS YP_001833934.1 182679788 6201715 3283188..3284126 1 NC_010581.1 PFAM: PfkB domain protein; KEGG: bra:BRADO1805 ketodeoxygluconokinase; ribokinase-like domain-containing protein 3284126 6201715 Bind_2876 Beijerinckia indica subsp. indica ATCC 9039 ribokinase-like domain-containing protein YP_001833934.1 3283188 D 395963 CDS YP_001833935.1 182679789 6198341 complement(3284263..3285570) 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3285570 6198341 Bind_2877 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833935.1 3284263 R 395963 CDS YP_001833936.1 182679790 6198342 complement(3285567..3288779) 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein; acriflavin resistance protein 3288779 6198342 Bind_2878 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001833936.1 3285567 R 395963 CDS YP_001833937.1 182679791 6198343 complement(3288962..3289252) 1 NC_010581.1 PFAM: protein of unknown function YGGT; KEGG: azc:AZC_3317 hypothetical protein; hypothetical protein 3289252 6198343 Bind_2879 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833937.1 3288962 R 395963 CDS YP_001833938.1 182679792 6198351 3290210..3290788 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: atc:AGR_C_478 hypothetical protein; TetR family transcriptional regulator 3290788 6198351 Bind_2880 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833938.1 3290210 D 395963 CDS YP_001833939.1 182679793 6198331 3290927..3291415 1 NC_010581.1 KEGG: atc:AGR_C_479 hypothetical protein; hypothetical protein 3291415 6198331 Bind_2881 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833939.1 3290927 D 395963 CDS YP_001833940.1 182679794 6198332 complement(3291525..3291803) 1 NC_010581.1 PFAM: transposase IS3/IS911 family protein; KEGG: acr:Acry_3414 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3291803 6198332 Bind_2882 Beijerinckia indica subsp. indica ATCC 9039 transposase IS3/IS911 family protein YP_001833940.1 3291525 R 395963 CDS YP_001833941.1 182679795 6198333 3291967..3292638 1 NC_010581.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: rpb:RPB_2557 transcriptional regulator, TetR family; TetR family transcriptional regulator 3292638 6198333 Bind_2883 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833941.1 3291967 D 395963 CDS YP_001833942.1 182679796 6200620 3292715..3293323 1 NC_010581.1 KEGG: xau:Xaut_4923 hypothetical protein; hypothetical protein 3293323 6200620 Bind_2884 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833942.1 3292715 D 395963 CDS YP_001833943.1 182679797 6200621 3293423..3293704 1 NC_010581.1 KEGG: rpe:RPE_3838 hypothetical protein; hypothetical protein 3293704 6200621 Bind_2885 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833943.1 3293423 D 395963 CDS YP_001833944.1 182679798 6200622 3293735..3294184 1 NC_010581.1 KEGG: rpe:RPE_3839 hypothetical protein; hypothetical protein 3294184 6200622 Bind_2886 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833944.1 3293735 D 395963 CDS YP_001833945.1 182679799 6200600 3294312..3294824 1 NC_010581.1 PFAM: membrane protein of uknown function UCP014873; KEGG: smd:Smed_0077 membrane protein of uknown function UCP014873; hypothetical protein 3294824 6200600 Bind_2887 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833945.1 3294312 D 395963 CDS YP_001833946.1 182679800 6200601 3295195..3296322 1 NC_010581.1 KEGG: ckl:CKL_2871 hypothetical protein; hypothetical protein 3296322 6200601 Bind_2888 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833946.1 3295195 D 395963 CDS YP_001833947.1 182679801 6200602 complement(3296559..3296921) 1 NC_010581.1 KEGG: xau:Xaut_0788 hypothetical protein; hypothetical protein 3296921 6200602 Bind_2889 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833947.1 3296559 R 395963 CDS YP_001833948.1 182679802 6198251 complement(3296918..3297106) 1 NC_010581.1 KEGG: xau:Xaut_0787 hypothetical protein; hypothetical protein 3297106 6198251 Bind_2890 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833948.1 3296918 R 395963 CDS YP_001833949.1 182679803 6198252 complement(3297377..3298105) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1860 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3298105 6198252 Bind_2891 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833949.1 3297377 R 395963 CDS YP_001833950.1 182679804 6198253 complement(3298173..3298757) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_3672 transcriptional regulator, TetR family; TetR family transcriptional regulator 3298757 6198253 Bind_2892 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001833950.1 3298173 R 395963 CDS YP_001833951.1 182679805 6198254 3299265..3299552 1 NC_010581.1 PFAM: Prophage CP4-57 regulatory; KEGG: mes:Meso_0497 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 3299552 6198254 Bind_2893 Beijerinckia indica subsp. indica ATCC 9039 phage transcriptional regulator AlpA YP_001833951.1 3299265 D 395963 CDS YP_001833952.1 182679806 6198256 complement(3301041..3302642) 1 NC_010581.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: atc:AGR_C_480 GMP synthase (glutamine-hydrolysing); GMP synthase 3302642 6198256 Bind_2895 Beijerinckia indica subsp. indica ATCC 9039 GMP synthase YP_001833952.1 3301041 R 395963 CDS YP_001833953.1 182679807 6200583 complement(3302938..3303801) 1 NC_010581.1 TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 methyltransferase FkbM family; FkbM family methyltransferase 3303801 6200583 Bind_2896 Beijerinckia indica subsp. indica ATCC 9039 FkbM family methyltransferase YP_001833953.1 3302938 R 395963 CDS YP_001833954.1 182679808 6200584 3304232..3305065 1 NC_010581.1 KEGG: pla:Plav_2600 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 3305065 6200584 Bind_2897 Beijerinckia indica subsp. indica ATCC 9039 methionine aminopeptidase YP_001833954.1 3304232 D 395963 CDS YP_001833955.1 182679809 6200585 3305062..3305787 1 NC_010581.1 PFAM: DNA repair protein RadC; KEGG: rpc:RPC_0575 DNA repair protein RadC; DNA repair protein RadC 3305787 6200585 Bind_2898 Beijerinckia indica subsp. indica ATCC 9039 DNA repair protein RadC YP_001833955.1 3305062 D 395963 CDS YP_001833956.1 182679810 6200367 3305889..3306773 1 NC_010581.1 PFAM: EAL domain protein; KEGG: azc:AZC_4658 conserved putative membrane protein; diguanylate phosphodiesterase 3306773 6200367 Bind_2899 Beijerinckia indica subsp. indica ATCC 9039 diguanylate phosphodiesterase YP_001833956.1 3305889 D 395963 CDS YP_001833957.1 182679811 6200368 complement(3306724..3307023) 1 NC_010581.1 PFAM: Usg family protein; KEGG: bja:bsl5624 hypothetical protein; Usg family protein 3307023 6200368 Bind_2900 Beijerinckia indica subsp. indica ATCC 9039 Usg family protein YP_001833957.1 3306724 R 395963 CDS YP_001833958.1 182679812 6200369 complement(3307251..3307859) 1 NC_010581.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bbt:BBta_5312 hypothetical protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3307859 6200369 Bind_2901 Beijerinckia indica subsp. indica ATCC 9039 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001833958.1 3307251 R 395963 CDS YP_001833959.1 182679813 6199744 complement(3307886..3308638) 1 NC_010581.1 KEGG: rpc:RPC_1636 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor 3308638 6199744 Bind_2902 Beijerinckia indica subsp. indica ATCC 9039 xanthine dehydrogenase accessory factor YP_001833959.1 3307886 R 395963 CDS YP_001833960.1 182679814 6199745 complement(3308638..3308955) 1 NC_010581.1 PFAM: protein of unknown function DUF182; KEGG: mex:Mext_1055 protein of unknown function DUF182; hypothetical protein 3308955 6199745 Bind_2903 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833960.1 3308638 R 395963 CDS YP_001833961.1 182679815 6199746 3309221..3310354 1 NC_010581.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_A1692 alpha/beta hydrolase; 3-oxoadipate enol-lactonase 3310354 6199746 Bind_2904 Beijerinckia indica subsp. indica ATCC 9039 3-oxoadipate enol-lactonase YP_001833961.1 3309221 D 395963 CDS YP_001833962.1 182679816 6198168 complement(3310375..3311022) 1 NC_010581.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: cya:CYA_2030 TonB family protein; TonB family protein 3311022 6198168 Bind_2905 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001833962.1 3310375 R 395963 CDS YP_001833963.1 182679817 6198169 complement(3311134..3311928) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bms:BR0700 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3311928 6198169 Bind_2906 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001833963.1 3311134 R 395963 CDS YP_001833964.1 182679818 6198170 3312233..3313012 1 NC_010581.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bmb:BruAb2_1006 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 3313012 6198170 Bind_2907 Beijerinckia indica subsp. indica ATCC 9039 ubiquinone/menaquinone biosynthesis methyltransferase YP_001833964.1 3312233 D 395963 CDS YP_001833965.1 182679819 6198163 3313111..3314682 1 NC_010581.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: nha:Nham_0050 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 3314682 6198163 Bind_2908 Beijerinckia indica subsp. indica ATCC 9039 2-polyprenylphenol 6-hydroxylase YP_001833965.1 3313111 D 395963 CDS YP_001833966.1 182679820 6198164 complement(3314739..3315155) 1 NC_010581.1 KEGG: bur:Bcep18194_B1796 hypothetical protein; hypothetical protein 3315155 6198164 Bind_2909 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833966.1 3314739 R 395963 CDS YP_001833967.1 182679821 6198165 3315568..3316791 1 NC_010581.1 KEGG: pla:Plav_3656 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3316791 6198165 Bind_2910 Beijerinckia indica subsp. indica ATCC 9039 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001833967.1 3315568 D 395963 CDS YP_001833968.1 182679822 6198173 3316788..3317270 1 NC_010581.1 KEGG: xau:Xaut_0077 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 3317270 6198173 Bind_2911 Beijerinckia indica subsp. indica ATCC 9039 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001833968.1 3316788 D 395963 CDS YP_001833969.1 182679823 6198174 3317267..3317716 1 NC_010581.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: azc:AZC_0708 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 3317716 6198174 Bind_2912 Beijerinckia indica subsp. indica ATCC 9039 BadM/Rrf2 family transcriptional regulator YP_001833969.1 3317267 D 395963 CDS YP_001833970.1 182679824 6198175 3317754..3318113 1 NC_010581.1 hypothetical protein 3318113 6198175 Bind_2913 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833970.1 3317754 D 395963 CDS YP_001833971.1 182679825 6198309 3318854..3319318 1 NC_010581.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: xau:Xaut_2034 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3319318 6198309 Bind_2914 Beijerinckia indica subsp. indica ATCC 9039 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001833971.1 3318854 D 395963 CDS YP_001833972.1 182679826 6198310 complement(3319355..3320359) 1 NC_010581.1 PFAM: Glucokinase; KEGG: smd:Smed_3369 glucokinase; glucokinase 3320359 6198310 Bind_2915 Beijerinckia indica subsp. indica ATCC 9039 glucokinase YP_001833972.1 3319355 R 395963 CDS YP_001833973.1 182679827 6198311 3320556..3322172 1 NC_010581.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bmb:BruAb1_0967 FumB, fumarate hydratase, class I; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 3322172 6198311 Bind_2916 Beijerinckia indica subsp. indica ATCC 9039 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta YP_001833973.1 3320556 D 395963 CDS YP_001833974.1 182679828 6198289 complement(3322278..3323915) 1 NC_010581.1 PFAM: protein of unknown function DUF949; KEGG: xau:Xaut_0510 protein of unknown function DUF949; hypothetical protein 3323915 6198289 Bind_2917 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833974.1 3322278 R 395963 CDS YP_001833975.1 182679829 6198290 complement(3324111..3325064) 1 NC_010581.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 3325064 6198290 Bind_2918 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001833975.1 3324111 R 395963 CDS YP_001833976.1 182679830 6198291 complement(3325231..3327555) 1 NC_010581.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bbt:BBta_5973 isoquinoline 1-oxidoreductase beta subunit; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 3327555 6198291 Bind_2919 Beijerinckia indica subsp. indica ATCC 9039 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001833976.1 3325231 R 395963 CDS YP_001833977.1 182679831 6198299 complement(3327557..3328009) 1 NC_010581.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_5972 isoquinoline 1-oxidoreductase alpha subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3328009 6198299 Bind_2920 Beijerinckia indica subsp. indica ATCC 9039 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001833977.1 3327557 R 395963 CDS YP_001833978.1 182679832 6198300 3328438..3330033 1 NC_010581.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bja:blr4455 putative outer-membrane immunogenic protein precursor; RND efflux system outer membrane lipoprotein 3330033 6198300 Bind_2921 Beijerinckia indica subsp. indica ATCC 9039 RND efflux system outer membrane lipoprotein YP_001833978.1 3328438 D 395963 CDS YP_001833979.1 182679833 6198301 3330030..3331409 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_2569 secretion protein HlyD; RND family efflux transporter MFP subunit 3331409 6198301 Bind_2922 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001833979.1 3330030 D 395963 CDS YP_001833980.1 182679834 6198364 3331406..3334630 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2559 acriflavin resistance protein; acriflavin resistance protein 3334630 6198364 Bind_2923 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001833980.1 3331406 D 395963 CDS YP_001833981.1 182679835 6198365 3334643..3337777 1 NC_010581.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2560 acriflavin resistance protein; acriflavin resistance protein 3337777 6198365 Bind_2924 Beijerinckia indica subsp. indica ATCC 9039 acriflavin resistance protein YP_001833981.1 3334643 D 395963 CDS YP_001833982.1 182679836 6198366 3337911..3338768 1 NC_010581.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: xau:Xaut_3512 ferric reductase domain protein transmembrane component domain; ferric reductase domain-containing protein 3338768 6198366 Bind_2925 Beijerinckia indica subsp. indica ATCC 9039 ferric reductase domain-containing protein YP_001833982.1 3337911 D 395963 CDS YP_001833983.1 182679837 6198370 complement(3338777..3339445) 1 NC_010581.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: azc:AZC_1017 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 3339445 6198370 Bind_2926 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylanthranilate isomerase YP_001833983.1 3338777 R 395963 CDS YP_001833984.1 182679838 6198371 complement(3339523..3339819) 1 NC_010581.1 KEGG: xau:Xaut_2218 hypothetical protein; hypothetical protein 3339819 6198371 Bind_2927 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833984.1 3339523 R 395963 CDS YP_001833985.1 182679839 6198372 complement(3340200..3340493) 1 NC_010581.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_0395 integration host factor subunit beta; integration host factor subunit beta 3340493 6198372 Bind_2928 Beijerinckia indica subsp. indica ATCC 9039 integration host factor subunit beta YP_001833985.1 3340200 R 395963 CDS YP_001833986.1 182679840 6198361 complement(3340553..3341527) 1 NC_010581.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: azc:AZC_3717 peptidase S49 protein; signal peptide peptidase SppA, 36K type 3341527 6198361 Bind_2929 Beijerinckia indica subsp. indica ATCC 9039 signal peptide peptidase SppA, 36K type YP_001833986.1 3340553 R 395963 CDS YP_001833987.1 182679841 6198362 complement(3341639..3342142) 1 NC_010581.1 PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2145 NUDIX hydrolase; NUDIX hydrolase 3342142 6198362 Bind_2930 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001833987.1 3341639 R 395963 CDS YP_001833988.1 182679842 6198363 complement(3342343..3343680) 1 NC_010581.1 KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 3343680 6198363 Bind_2931 Beijerinckia indica subsp. indica ATCC 9039 carboxyl-terminal protease YP_001833988.1 3342343 R 395963 CDS YP_001833989.1 182679843 6201408 complement(3343680..3345059) 1 NC_010581.1 PFAM: Peptidase M23; KEGG: bja:blr0433 hypothetical protein; peptidase M23 3345059 6201408 Bind_2932 Beijerinckia indica subsp. indica ATCC 9039 peptidase M23 YP_001833989.1 3343680 R 395963 CDS YP_001833990.1 182679844 6201409 complement(3345160..3345672) 1 NC_010581.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3345672 6201409 Bind_2933 Beijerinckia indica subsp. indica ATCC 9039 rRNA large subunit methyltransferase YP_001833990.1 3345160 R 395963 CDS YP_001833991.1 182679845 6201410 complement(3345757..3346143) 1 NC_010581.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mlo:mll4005 hypothetical protein; iojap family protein 3346143 6201410 Bind_2934 Beijerinckia indica subsp. indica ATCC 9039 iojap family protein YP_001833991.1 3345757 R 395963 CDS YP_001833992.1 182679846 6201767 complement(3346287..3347618) 1 NC_010581.1 KEGG: bja:blr3152 HSP70 family molecular chaperone; HSP70 family molecular chaperone 3347618 6201767 Bind_2935 Beijerinckia indica subsp. indica ATCC 9039 HSP70 family molecular chaperone YP_001833992.1 3346287 R 395963 CDS YP_001833993.1 182679847 6201768 complement(3347710..3349443) 1 NC_010581.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3349443 rpsA 6201768 rpsA Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S1 YP_001833993.1 3347710 R 395963 CDS YP_001833994.1 182679848 6201769 complement(3349716..3350951) 1 NC_010581.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpd:RPD_4002 TonB-like; TonB family protein 3350951 6201769 Bind_2937 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001833994.1 3349716 R 395963 CDS YP_001833995.1 182679849 6198355 complement(3351282..3351917) 1 NC_010581.1 KEGG: xau:Xaut_1111 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 3351917 6198355 Bind_2938 Beijerinckia indica subsp. indica ATCC 9039 cytidylate kinase YP_001833995.1 3351282 R 395963 CDS YP_001833996.1 182679850 6198356 3352341..3352706 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein; hypothetical protein 3352706 6198356 Bind_2939 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833996.1 3352341 D 395963 CDS YP_001833997.1 182679851 6198320 complement(3353386..3353958) 1 NC_010581.1 KEGG: lic:LIC12825 hypothetical protein; hypothetical protein 3353958 6198320 Bind_2940 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833997.1 3353386 R 395963 CDS YP_001833998.1 182679852 6198321 complement(3354103..3354723) 1 NC_010581.1 KEGG: rha:RHA1_ro00612 hypothetical protein; hypothetical protein 3354723 6198321 Bind_2941 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001833998.1 3354103 R 395963 CDS YP_001833999.1 182679853 6199036 complement(3354888..3355817) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5221 transcriptional regulator, AraC family; AraC family transcriptional regulator 3355817 6199036 Bind_2942 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001833999.1 3354888 R 395963 CDS YP_001834000.1 182679854 6199037 3355849..3356799 1 NC_010581.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_3743 putative glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3356799 6199037 Bind_2943 Beijerinckia indica subsp. indica ATCC 9039 glycerophosphoryl diester phosphodiesterase YP_001834000.1 3355849 D 395963 CDS YP_001834001.1 182679855 6199038 complement(3356817..3357791) 1 NC_010581.1 PFAM: protein of unknown function UPF0074; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bja:blr7860 hypothetical protein; helix-turn-helix type 11 domain-containing protein 3357791 6199038 Bind_2944 Beijerinckia indica subsp. indica ATCC 9039 helix-turn-helix type 11 domain-containing protein YP_001834001.1 3356817 R 395963 CDS YP_001834002.1 182679856 6198268 3357885..3358400 1 NC_010581.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pfo:Pfl_3712 cupin region; cupin 3358400 6198268 Bind_2945 Beijerinckia indica subsp. indica ATCC 9039 cupin YP_001834002.1 3357885 D 395963 CDS YP_001834003.1 182679857 6198269 3358436..3358984 1 NC_010581.1 KEGG: nfa:nfa53680 putative methylated-DNA:protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3358984 6198269 Bind_2946 Beijerinckia indica subsp. indica ATCC 9039 methylated-DNA--protein-cysteine methyltransferase YP_001834003.1 3358436 D 395963 CDS YP_001834004.1 182679858 6198270 3359030..3359434 1 NC_010581.1 KEGG: pla:Plav_1985 hypothetical protein; hypothetical protein 3359434 6198270 Bind_2947 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834004.1 3359030 D 395963 CDS YP_001834005.1 182679859 6198391 3359700..3360272 1 NC_010581.1 KEGG: rpb:RPB_2974 hypothetical protein; hypothetical protein 3360272 6198391 Bind_2948 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834005.1 3359700 D 395963 CDS YP_001834006.1 182679860 6198392 3360433..3360885 1 NC_010581.1 PFAM: regulatory protein MarR; KEGG: gdi:GDI0347 putative transcriptional regulator, family MarR; MarR family transcriptional regulator 3360885 6198392 Bind_2949 Beijerinckia indica subsp. indica ATCC 9039 MarR family transcriptional regulator YP_001834006.1 3360433 D 395963 CDS YP_001834007.1 182679861 6198393 3360944..3361510 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: gdi:GDI0348 isochorismatase hydrolase; isochorismatase hydrolase 3361510 6198393 Bind_2950 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001834007.1 3360944 D 395963 CDS YP_001834008.1 182679862 6198386 3361512..3361841 1 NC_010581.1 KEGG: bxe:Bxe_A1711 hypothetical protein; hypothetical protein 3361841 6198386 Bind_2951 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834008.1 3361512 D 395963 CDS YP_001834009.1 182679863 6198387 3361838..3363055 1 NC_010581.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bam:Bamb_3727 major facilitator superfamily MFS_1; major facilitator transporter 3363055 6198387 Bind_2952 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834009.1 3361838 D 395963 CDS YP_001834010.1 182679864 6198380 complement(join(3363335..3363772,3363772..3364098)) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 3364098 6198380 Bind_2954 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001834010.1 3363335 R 395963 CDS YP_001834011.1 182679865 6198381 3364664..3365629 1 NC_010581.1 PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO0452 putative bifunctional protein: class I glutamine amidotransferase-like (N-terminal), transcriptional regulator protein AraC/XylS family (C-terminal); AraC family transcriptional regulator 3365629 6198381 Bind_2955 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001834011.1 3364664 D 395963 CDS YP_001834012.1 182679866 6198382 3365845..3366603 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_5206 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3366603 6198382 Bind_2956 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001834012.1 3365845 D 395963 CDS YP_001834013.1 182679867 6201589 3366746..3367093 1 NC_010581.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pen:PSEEN2135 carboxymuconolactone decarboxylase; alkylhydroperoxidase 3367093 6201589 Bind_2957 Beijerinckia indica subsp. indica ATCC 9039 alkylhydroperoxidase YP_001834013.1 3366746 D 395963 CDS YP_001834014.1 182679868 6201590 3367274..3367534 1 NC_010581.1 KEGG: bbt:BBta_3039 putative succinate-semialdehyde dehydrogenase; putative succinate-semialdehyde dehydrogenase 3367534 6201590 Bind_2958 Beijerinckia indica subsp. indica ATCC 9039 putative succinate-semialdehyde dehydrogenase YP_001834014.1 3367274 D 395963 CDS YP_001834015.1 182679869 6201591 complement(3367479..3367838) 1 NC_010581.1 KEGG: reh:H16_B1352 insecticidal toxin complex protein; hypothetical protein 3367838 6201591 Bind_2959 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834015.1 3367479 R 395963 CDS YP_001834016.1 182679870 6198367 complement(3367984..3368202) 1 NC_010581.1 hypothetical protein 3368202 6198367 Bind_2960 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834016.1 3367984 R 395963 CDS YP_001834017.1 182679871 6198368 complement(3368422..3369417) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0260 putative NADPH quinone oxidoreductase protein; alcohol dehydrogenase 3369417 6198368 Bind_2961 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001834017.1 3368422 R 395963 CDS YP_001834018.1 182679872 6198369 3369517..3370392 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B3081 transcriptional regulator, LysR family; LysR family transcriptional regulator 3370392 6198369 Bind_2962 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001834018.1 3369517 D 395963 CDS YP_001834019.1 182679873 6198358 complement(3370451..3371446) 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: psp:PSPPH_1746 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 3371446 6198358 Bind_2963 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001834019.1 3370451 R 395963 CDS YP_001834020.1 182679874 6198359 complement(3371674..3372513) 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: rru:Rru_A0028 beta-lactamase-like; beta-lactamase domain-containing protein 3372513 6198359 Bind_2964 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001834020.1 3371674 R 395963 CDS YP_001834021.1 182679875 6198360 complement(3372534..3372860) 1 NC_010581.1 KEGG: rru:Rru_A0029 hypothetical protein; hypothetical protein 3372860 6198360 Bind_2965 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834021.1 3372534 R 395963 CDS YP_001834022.1 182679876 6198347 complement(3372867..3373412) 1 NC_010581.1 KEGG: rru:Rru_A0030 hypothetical protein; hypothetical protein 3373412 6198347 Bind_2966 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834022.1 3372867 R 395963 CDS YP_001834023.1 182679877 6198348 3373583..3374461 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A0031 transcriptional regulator, LysR family; LysR family transcriptional regulator 3374461 6198348 Bind_2967 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001834023.1 3373583 D 395963 CDS YP_001834024.1 182679878 6198349 3375071..3376408 1 NC_010581.1 PFAM: extracellular solute-binding protein family 1; KEGG: azo:azo3835 putative regulatory lipoprotein; extracellular solute-binding protein 3376408 6198349 Bind_2968 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001834024.1 3375071 D 395963 CDS YP_001834025.1 182679879 6198338 3376405..3377775 1 NC_010581.1 PFAM: protein of unknown function DUF1111; KEGG: pen:PSEEN2346 hypothetical protein; hypothetical protein 3377775 6198338 Bind_2969 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834025.1 3376405 D 395963 CDS YP_001834026.1 182679880 6198339 3377810..3379966 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA0153 possible outer membrane receptor for Fe transport; TonB-dependent receptor 3379966 6198339 Bind_2970 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001834026.1 3377810 D 395963 CDS YP_001834027.1 182679881 6198340 join(3380038..3380364,3380364..3380801) 1 NC_010581.1 KEGG: bcs:BCAN_A0546 hypothetical protein; transposase 3380801 6198340 Bind_2971 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001834027.1 3380038 D 395963 CDS YP_001834028.1 182679882 6198131 3382004..3382777 1 NC_010581.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sal:Sala_2525 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3382777 6198131 Bind_2973 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001834028.1 3382004 D 395963 CDS YP_001834029.1 182679883 6198132 3382837..3383508 1 NC_010581.1 PFAM: autoinducer synthesis protein; KEGG: sal:Sala_2589 autoinducer synthesis protein; autoinducer synthesis protein 3383508 6198132 Bind_2974 Beijerinckia indica subsp. indica ATCC 9039 autoinducer synthesis protein YP_001834029.1 3382837 D 395963 CDS YP_001834030.1 182679884 6198135 3383498..3384394 1 NC_010581.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: sal:Sala_2590 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 3384394 6198135 Bind_2975 Beijerinckia indica subsp. indica ATCC 9039 phytanoyl-CoA dioxygenase YP_001834030.1 3383498 D 395963 CDS YP_001834031.1 182679885 6198136 complement(3384461..3385228) 1 NC_010581.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: swi:Swit_5012 regulatory protein, LuxR; LuxR family transcriptional regulator 3385228 6198136 Bind_2976 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001834031.1 3384461 R 395963 CDS YP_001834032.1 182679886 6198137 3385761..3386669 1 NC_010581.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: plu:plu0930 hypothetical protein; 2OG-Fe(II) oxygenase 3386669 6198137 Bind_2977 Beijerinckia indica subsp. indica ATCC 9039 2OG-Fe(II) oxygenase YP_001834032.1 3385761 D 395963 CDS YP_001834033.1 182679887 6201450 complement(3387118..3388020) 1 NC_010581.1 KEGG: bpe:BP2856 hypothetical protein; hypothetical protein 3388020 6201450 Bind_2979 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834033.1 3387118 R 395963 CDS YP_001834034.1 182679888 6201451 3388158..3389057 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpe:BP2857 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 3389057 6201451 Bind_2980 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001834034.1 3388158 D 395963 CDS YP_001834035.1 182679889 6201026 complement(3389257..3389799) 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: ava:Ava_1596 transcriptional regulator, TetR family; TetR family transcriptional regulator 3389799 6201026 Bind_2981 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001834035.1 3389257 R 395963 CDS YP_001834036.1 182679890 6201027 3389848..3390702 1 NC_010581.1 KEGG: bmu:Bmul_4384 hypothetical protein; hypothetical protein 3390702 6201027 Bind_2982 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834036.1 3389848 D 395963 CDS YP_001834037.1 182679891 6201028 3391396..3391755 1 NC_010581.1 hypothetical protein 3391755 6201028 Bind_2983 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834037.1 3391396 D 395963 CDS YP_001834038.1 182679892 6201253 complement(3392392..3392886) 1 NC_010581.1 PFAM: protein of unknown function DUF892; KEGG: azc:AZC_2285 hypothetical protein; hypothetical protein 3392886 6201253 Bind_2984 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834038.1 3392392 R 395963 CDS YP_001834039.1 182679893 6201254 3393675..3394499 1 NC_010581.1 KEGG: gdi:GDI1519 hypothetical protein; hypothetical protein 3394499 6201254 Bind_2985 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834039.1 3393675 D 395963 CDS YP_001834040.1 182679894 6201255 complement(3394641..3395255) 1 NC_010581.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_0062 isochorismatase hydrolase; isochorismatase hydrolase 3395255 6201255 Bind_2986 Beijerinckia indica subsp. indica ATCC 9039 isochorismatase hydrolase YP_001834040.1 3394641 R 395963 CDS YP_001834041.1 182679895 6201399 complement(3395280..3395879) 1 NC_010581.1 PFAM: Inorganic pyrophosphatase; KEGG: sus:Acid_3034 inorganic pyrophosphatase; inorganic pyrophosphatase 3395879 6201399 Bind_2987 Beijerinckia indica subsp. indica ATCC 9039 inorganic pyrophosphatase YP_001834041.1 3395280 R 395963 CDS YP_001834042.1 182679896 6201401 complement(3396603..3397622) 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5011 putative alpha/beta hydrolase; alpha/beta hydrolase fold protein 3397622 6201401 Bind_2989 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001834042.1 3396603 R 395963 CDS YP_001834043.1 182679897 6198325 complement(3397876..3398886) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3398886 6198325 Bind_2990 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001834043.1 3397876 R 395963 CDS YP_001834044.1 182679898 6198326 complement(3398944..3399198) 1 NC_010581.1 KEGG: rpd:RPD_3215 hypothetical protein; hypothetical protein 3399198 6198326 Bind_2991 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834044.1 3398944 R 395963 CDS YP_001834045.1 182679899 6198327 complement(3399404..3400261) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110421 putative oxidoreductase/stress-related protein; short-chain dehydrogenase/reductase SDR 3400261 6198327 Bind_2992 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001834045.1 3399404 R 395963 CDS YP_001834046.1 182679900 6198317 complement(3400778..3400999) 1 NC_010581.1 KEGG: mma:MM_0228 hypothetical protein; hypothetical protein 3400999 6198317 Bind_2993 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834046.1 3400778 R 395963 CDS YP_001834047.1 182679901 6198318 3401141..3402373 1 NC_010581.1 KEGG: bta:789503 similar to mucin 5; hypothetical protein 3402373 6198318 Bind_2994 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834047.1 3401141 D 395963 CDS YP_001834048.1 182679902 6198319 complement(3403150..3404283) 1 NC_010581.1 PFAM: protein of unknown function UPF0118; KEGG: gox:GOX0988 hypothetical protein; hypothetical protein 3404283 6198319 Bind_2995 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834048.1 3403150 R 395963 CDS YP_001834049.1 182679903 6198303 3405026..3405388 1 NC_010581.1 hypothetical protein 3405388 6198303 Bind_2996 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834049.1 3405026 D 395963 CDS YP_001834050.1 182679904 6198304 3405964..3407436 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3245 putative two-component system sensor protein; integral membrane sensor signal transduction histidine kinase 3407436 6198304 Bind_2997 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834050.1 3405964 D 395963 CDS YP_001834051.1 182679905 6198305 3407421..3408803 1 NC_010581.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bra:BRADO3244 putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator; two component, sigma54 specific, Fis family transcriptional regulator 3408803 6198305 Bind_2998 Beijerinckia indica subsp. indica ATCC 9039 two component, sigma54 specific, Fis family transcriptional regulator YP_001834051.1 3407421 D 395963 CDS YP_001834052.1 182679906 6198297 3409731..3410378 1 NC_010581.1 KEGG: bra:BRADO3242 hypothetical protein; hypothetical protein 3410378 6198297 Bind_3000 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834052.1 3409731 D 395963 CDS YP_001834053.1 182679907 6198298 3410442..3410765 1 NC_010581.1 hypothetical protein 3410765 6198298 Bind_3001 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834053.1 3410442 D 395963 CDS YP_001834054.1 182679908 6198286 3410762..3412006 1 NC_010581.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein; arsenical pump membrane protein 3412006 6198286 Bind_3002 Beijerinckia indica subsp. indica ATCC 9039 arsenical pump membrane protein YP_001834054.1 3410762 D 395963 CDS YP_001834055.1 182679909 6198287 3412034..3412498 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1401 hypothetical membrane spanning protein; hypothetical protein 3412498 6198287 Bind_3003 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834055.1 3412034 D 395963 CDS YP_001834056.1 182679910 6198288 3412491..3413762 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bra:BRADO3241 major facilitator superfamily (MFS) transporter; major facilitator transporter 3413762 6198288 Bind_3004 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834056.1 3412491 D 395963 CDS YP_001834057.1 182679911 6198264 complement(join(3420768..3421367,3421367..3421711)) 1 NC_010581.1 KEGG: acr:Acry_3597 transposase and inactivated derivatives-like protein; transposase 3421711 6198264 Bind_3006 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001834057.1 3420768 R 395963 CDS YP_001834058.1 182679912 6198265 3421854..3422324 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_3906 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3422324 6198265 Bind_3007 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001834058.1 3421854 D 395963 CDS YP_001834059.1 182679913 6198247 complement(3422468..3423532) 1 NC_010581.1 PFAM: Patatin; KEGG: xau:Xaut_1886 patatin; patatin 3423532 6198247 Bind_3008 Beijerinckia indica subsp. indica ATCC 9039 patatin YP_001834059.1 3422468 R 395963 CDS YP_001834060.1 182679914 6198248 complement(3423779..3424564) 1 NC_010581.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_6971 D-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 3424564 6198248 Bind_3009 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxybutyrate dehydrogenase YP_001834060.1 3423779 R 395963 CDS YP_001834061.1 182679915 6198249 3424740..3425219 1 NC_010581.1 KEGG: nha:Nham_0618 putative ferric uptake regulator, FUR family; ferric uptake regulator family protein 3425219 6198249 Bind_3010 Beijerinckia indica subsp. indica ATCC 9039 ferric uptake regulator family protein YP_001834061.1 3424740 D 395963 CDS YP_001834062.1 182679916 6198244 complement(3425261..3426391) 1 NC_010581.1 KEGG: ajs:Ajs_3068 hypothetical protein; hypothetical protein 3426391 6198244 Bind_3011 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834062.1 3425261 R 395963 CDS YP_001834063.1 182679917 6198245 complement(3426476..3427702) 1 NC_010581.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: sma:SAV101 polyketide synthase; 8-amino-7-oxononanoate synthase 3427702 6198245 Bind_3012 Beijerinckia indica subsp. indica ATCC 9039 8-amino-7-oxononanoate synthase YP_001834063.1 3426476 R 395963 CDS YP_001834064.1 182679918 6198246 3428789..3430318 1 NC_010581.1 PFAM: glycosyl transferase family 20; KEGG: rle:RL0503 putative trehalose-6-phosphate synthase,glycosyltransferase; Alpha,alpha-trehalose-phosphate synthase 3430318 6198246 Bind_3013 Beijerinckia indica subsp. indica ATCC 9039 Alpha,alpha-trehalose-phosphate synthase YP_001834064.1 3428789 D 395963 CDS YP_001834065.1 182679919 6198238 3430561..3433845 1 NC_010581.1 KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 3433845 6198238 Bind_3014 Beijerinckia indica subsp. indica ATCC 9039 trehalose synthase YP_001834065.1 3430561 D 395963 CDS YP_001834066.1 182679920 6198239 complement(3433874..3436162) 1 NC_010581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swi:Swit_5251 histidine kinase; integral membrane sensor hybrid histidine kinase 3436162 6198239 Bind_3015 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor hybrid histidine kinase YP_001834066.1 3433874 R 395963 CDS YP_001834067.1 182679921 6198240 complement(3436461..3436670) 1 NC_010581.1 hypothetical protein 3436670 6198240 Bind_3016 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834067.1 3436461 R 395963 CDS YP_001834068.1 182679922 6198235 complement(3436872..3437918) 1 NC_010581.1 KEGG: ade:Adeh_2750 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 3437918 6198235 Bind_3017 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001834068.1 3436872 R 395963 CDS YP_001834069.1 182679923 6198236 complement(3438150..3438983) 1 NC_010581.1 PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain protein; UspA domain-containing protein 3438983 6198236 Bind_3018 Beijerinckia indica subsp. indica ATCC 9039 UspA domain-containing protein YP_001834069.1 3438150 R 395963 CDS YP_001834070.1 182679924 6198237 3439175..3439558 1 NC_010581.1 PFAM: PRC-barrel domain protein; KEGG: xau:Xaut_4137 PRC-barrel domain protein; PRC-barrel domain-containing protein 3439558 6198237 Bind_3019 Beijerinckia indica subsp. indica ATCC 9039 PRC-barrel domain-containing protein YP_001834070.1 3439175 D 395963 CDS YP_001834071.1 182679925 6198231 complement(3439719..3440216) 1 NC_010581.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20; heat shock protein Hsp20 3440216 6198231 Bind_3020 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein Hsp20 YP_001834071.1 3439719 R 395963 CDS YP_001834072.1 182679926 6198232 complement(3440488..3441147) 1 NC_010581.1 PFAM: transcription activator effector binding; KEGG: bra:BRADO0382 conserved hypothetical protein; putative secreted protein; transcription activator effector binding 3441147 6198232 Bind_3021 Beijerinckia indica subsp. indica ATCC 9039 transcription activator effector binding YP_001834072.1 3440488 R 395963 CDS YP_001834073.1 182679927 6198233 3441869..3442093 1 NC_010581.1 KEGG: bch:Bcen2424_5289 hypothetical protein; hypothetical protein 3442093 6198233 Bind_3022 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834073.1 3441869 D 395963 CDS YP_001834074.1 182679928 6198228 3442262..3443053 1 NC_010581.1 KEGG: azc:AZC_1536 hypothetical protein; hypothetical protein 3443053 6198228 Bind_3023 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834074.1 3442262 D 395963 CDS YP_001834075.1 182679929 6198229 3443308..3443757 1 NC_010581.1 PFAM: protein of unknown function DUF983; KEGG: pla:Plav_2829 protein of unknown function DUF983; hypothetical protein 3443757 6198229 Bind_3024 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834075.1 3443308 D 395963 CDS YP_001834076.1 182679930 6198230 3444091..3445218 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator superfamily MFS_1; major facilitator transporter 3445218 6198230 Bind_3025 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834076.1 3444091 D 395963 CDS YP_001834077.1 182679931 6198224 3445363..3445530 1 NC_010581.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3445530 rpmG 6198224 rpmG Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L33 YP_001834077.1 3445363 D 395963 CDS YP_001834078.1 182679932 6198225 complement(3445630..3446382) 1 NC_010581.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mex:Mext_1051 DNA repair protein RecO; DNA repair protein RecO 3446382 6198225 Bind_3027 Beijerinckia indica subsp. indica ATCC 9039 DNA repair protein RecO YP_001834078.1 3445630 R 395963 CDS YP_001834079.1 182679933 6198226 complement(3446399..3447373) 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: azc:AZC_1999 quinone oxidoreductase; alcohol dehydrogenase 3447373 6198226 Bind_3028 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001834079.1 3446399 R 395963 CDS YP_001834080.1 182679934 6198218 complement(3447401..3448474) 1 NC_010581.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpb:RPB_4433 threonine aldolase; threonine aldolase 3448474 6198218 Bind_3029 Beijerinckia indica subsp. indica ATCC 9039 threonine aldolase YP_001834080.1 3447401 R 395963 CDS YP_001834081.1 182679935 6198219 complement(3448585..3449205) 1 NC_010581.1 hypothetical protein 3449205 6198219 Bind_3030 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834081.1 3448585 R 395963 CDS YP_001834082.1 182679936 6198220 3449420..3454081 1 NC_010581.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); glutamate synthase 3454081 6198220 Bind_3031 Beijerinckia indica subsp. indica ATCC 9039 glutamate synthase YP_001834082.1 3449420 D 395963 CDS YP_001834083.1 182679937 6198141 3454220..3455638 1 NC_010581.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3455638 gltD 6198141 gltD Beijerinckia indica subsp. indica ATCC 9039 glutamate synthase subunit beta YP_001834083.1 3454220 D 395963 CDS YP_001834084.1 182679938 6198142 3455911..3456837 1 NC_010581.1 PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase, family 2; glycosyl transferase family protein 3456837 6198142 Bind_3033 Beijerinckia indica subsp. indica ATCC 9039 glycosyl transferase family protein YP_001834084.1 3455911 D 395963 CDS YP_001834085.1 182679939 6198143 complement(3456954..3457184) 1 NC_010581.1 hypothetical protein 3457184 6198143 Bind_3034 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834085.1 3456954 R 395963 CDS YP_001834086.1 182679940 6198148 complement(3457454..3457663) 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1893 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 3457663 6198148 Bind_3035 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001834086.1 3457454 R 395963 CDS YP_001834087.1 182679941 6198149 complement(3457995..3458684) 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nha:Nham_0696 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 3458684 6198149 Bind_3036 Beijerinckia indica subsp. indica ATCC 9039 phosphatidylethanolamine N-methyltransferase YP_001834087.1 3457995 R 395963 CDS YP_001834088.1 182679942 6198150 complement(3458687..3459982) 1 NC_010581.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3459982 mnmA 6198150 mnmA Beijerinckia indica subsp. indica ATCC 9039 tRNA-specific 2-thiouridylase MnmA YP_001834088.1 3458687 R 395963 CDS YP_001834089.1 182679943 6198210 3460599..3460874 1 NC_010581.1 PFAM: protein of unknown function DUF1153; KEGG: rpe:RPE_0964 protein of unknown function DUF1153; hypothetical protein 3460874 6198210 Bind_3038 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834089.1 3460599 D 395963 CDS YP_001834090.1 182679944 6198211 complement(3460969..3462003) 1 NC_010581.1 KEGG: mex:Mext_0821 hypothetical protein; hypothetical protein 3462003 6198211 Bind_3039 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834090.1 3460969 R 395963 CDS YP_001834091.1 182679945 6198212 3462716..3464191 1 NC_010581.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rpc:RPC_3720 leucyl aminopeptidase; leucyl aminopeptidase 3464191 6198212 Bind_3040 Beijerinckia indica subsp. indica ATCC 9039 leucyl aminopeptidase YP_001834091.1 3462716 D 395963 CDS YP_001834092.1 182679946 6198204 3464205..3465071 1 NC_010581.1 PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein; NLP/P60 protein 3465071 6198204 Bind_3041 Beijerinckia indica subsp. indica ATCC 9039 NLP/P60 protein YP_001834092.1 3464205 D 395963 CDS YP_001834093.1 182679947 6198205 3465258..3465458 1 NC_010581.1 PFAM: ribosomal protein L35; KEGG: bbt:BBta_0216 50S ribosomal protein L35; 50S ribosomal protein L35 3465458 rpmI 6198205 rpmI Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L35 YP_001834093.1 3465258 D 395963 CDS YP_001834094.1 182679948 6198206 3465504..3465869 1 NC_010581.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3465869 rplT 6198206 rplT Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L20 YP_001834094.1 3465504 D 395963 CDS YP_001834095.1 182679949 6198199 3466894..3467637 1 NC_010581.1 KEGG: afm:AFUA_1G10012 conserved hypothetical protein; hypothetical protein 3467637 6198199 Bind_3044 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834095.1 3466894 D 395963 CDS YP_001834096.1 182679950 6198200 complement(3468068..3468595) 1 NC_010581.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: cak:Caul_2070 carbohydrate kinase, thermoresistant glucokinase family; carbohydrate kinase 3468595 6198200 Bind_3045 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate kinase YP_001834096.1 3468068 R 395963 CDS YP_001834097.1 182679951 6198201 complement(3468592..3470754) 1 NC_010581.1 KEGG: rpe:RPE_0224 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 3470754 6198201 Bind_3046 Beijerinckia indica subsp. indica ATCC 9039 1A family penicillin-binding protein YP_001834097.1 3468592 R 395963 CDS YP_001834098.1 182679952 6198196 3470971..3472086 1 NC_010581.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3472086 6198196 Bind_3047 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunit beta YP_001834098.1 3470971 D 395963 CDS YP_001834099.1 182679953 6198197 complement(3472182..3472532) 1 NC_010581.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pau:PA14_58210 putative RplA family protein; rare lipoprotein A 3472532 6198197 Bind_3048 Beijerinckia indica subsp. indica ATCC 9039 rare lipoprotein A YP_001834099.1 3472182 R 395963 CDS YP_001834100.1 182679954 6198198 3472816..3474075 1 NC_010581.1 KEGG: oan:Oant_1728 hypothetical protein; hypothetical protein 3474075 6198198 Bind_3049 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834100.1 3472816 D 395963 CDS YP_001834101.1 182679955 6198191 3474086..3474760 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: oan:Oant_1727 methyltransferase type 12; type 12 methyltransferase 3474760 6198191 Bind_3050 Beijerinckia indica subsp. indica ATCC 9039 type 12 methyltransferase YP_001834101.1 3474086 D 395963 CDS YP_001834102.1 182679956 6198192 complement(3474950..3475909) 1 NC_010581.1 PFAM: protein of unknown function DUF403; KEGG: bra:BRADO2904 hypothetical protein; hypothetical protein 3475909 6198192 Bind_3051 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834102.1 3474950 R 395963 CDS YP_001834103.1 182679957 6198193 complement(3476203..3477651) 1 NC_010581.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpd:RPD_2240 protein of unknown function DUF404; hypothetical protein 3477651 6198193 Bind_3052 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834103.1 3476203 R 395963 CDS YP_001834104.1 182679958 6201764 3478043..3478183 1 NC_010581.1 hypothetical protein 3478183 6201764 Bind_3053 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834104.1 3478043 D 395963 CDS YP_001834105.1 182679959 6201765 3478275..3478814 1 NC_010581.1 PFAM: beta-Ig-H3/fasciclin; KEGG: mex:Mext_3627 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 3478814 6201765 Bind_3054 Beijerinckia indica subsp. indica ATCC 9039 beta-Ig-H3/fasciclin YP_001834105.1 3478275 D 395963 CDS YP_001834106.1 182679960 6201766 3479023..3480321 1 NC_010581.1 PFAM: protein of unknown function DUF459; KEGG: mex:Mext_3271 protein of unknown function DUF459; hypothetical protein 3480321 6201766 Bind_3055 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834106.1 3479023 D 395963 CDS YP_001834107.1 182679961 6198138 3480550..3481272 1 NC_010581.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_1194 ErfK/YbiS/YcfS/YnhG precursor; ErfK/YbiS/YcfS/YnhG family protein 3481272 6198138 Bind_3056 Beijerinckia indica subsp. indica ATCC 9039 ErfK/YbiS/YcfS/YnhG family protein YP_001834107.1 3480550 D 395963 CDS YP_001834108.1 182679962 6198139 3481837..3482286 1 NC_010581.1 PFAM: DoxX family protein; KEGG: gdi:GDI1220 hypothetical protein; DoxX family protein 3482286 6198139 Bind_3057 Beijerinckia indica subsp. indica ATCC 9039 DoxX family protein YP_001834108.1 3481837 D 395963 CDS YP_001834109.1 182679963 6198140 complement(3482479..3483663) 1 NC_010581.1 KEGG: azc:AZC_3903 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3483663 6198140 Bind_3058 Beijerinckia indica subsp. indica ATCC 9039 acetyl-CoA acetyltransferase YP_001834109.1 3482479 R 395963 CDS YP_001834110.1 182679964 6198177 3484342..3491505 1 NC_010581.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: nha:Nham_0725 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 3491505 6198177 Bind_3059 Beijerinckia indica subsp. indica ATCC 9039 filamentous hemagglutinin outer membrane protein YP_001834110.1 3484342 D 395963 CDS YP_001834111.1 182679965 6198178 3491600..3493372 1 NC_010581.1 PFAM: surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: nha:Nham_0727 hemolysin activation/secretion protein-like; polypeptide-transport-associated domain-containing protein 3493372 6198178 Bind_3060 Beijerinckia indica subsp. indica ATCC 9039 polypeptide-transport-associated domain-containing protein YP_001834111.1 3491600 D 395963 CDS YP_001834112.1 182679966 6198179 3493428..3493856 1 NC_010581.1 TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: nha:Nham_0728 MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 3493856 6198179 Bind_3061 Beijerinckia indica subsp. indica ATCC 9039 tonB-system energizer ExbB YP_001834112.1 3493428 D 395963 CDS YP_001834113.1 182679967 6201862 3493849..3494232 1 NC_010581.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: xau:Xaut_2279 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3494232 6201862 Bind_3062 Beijerinckia indica subsp. indica ATCC 9039 biopolymer transport protein ExbD/TolR YP_001834113.1 3493849 D 395963 CDS YP_001834114.1 182679968 6201863 3494237..3495031 1 NC_010581.1 TIGRFAM: TonB family protein; KEGG: nha:Nham_0730 TonB-like; TonB family protein 3495031 6201863 Bind_3063 Beijerinckia indica subsp. indica ATCC 9039 TonB family protein YP_001834114.1 3494237 D 395963 CDS YP_001834115.1 182679969 6201864 3495080..3495991 1 NC_010581.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2987 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3495991 6201864 Bind_3064 Beijerinckia indica subsp. indica ATCC 9039 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001834115.1 3495080 D 395963 CDS YP_001834116.1 182679970 6198159 3496542..3498746 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpe:RPE_2672 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3498746 6198159 Bind_3065 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834116.1 3496542 D 395963 CDS YP_001834117.1 182679971 6198160 3499417..3500361 1 NC_010581.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: rpe:RPE_0764 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 3500361 6198160 Bind_3066 Beijerinckia indica subsp. indica ATCC 9039 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001834117.1 3499417 D 395963 CDS YP_001834118.1 182679972 6198161 3500646..3503057 1 NC_010581.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpe:RPE_2669 general secretion pathway protein D; general secretion pathway protein D 3503057 6198161 Bind_3067 Beijerinckia indica subsp. indica ATCC 9039 general secretion pathway protein D YP_001834118.1 3500646 D 395963 CDS YP_001834119.1 182679973 6198152 complement(3503392..3504612) 1 NC_010581.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:blr6437 gluconolactonase precursor; SMP-30/gluconolaconase/LRE domain-containing protein 3504612 6198152 Bind_3069 Beijerinckia indica subsp. indica ATCC 9039 SMP-30/gluconolaconase/LRE domain-containing protein YP_001834119.1 3503392 R 395963 CDS YP_001834120.1 182679974 6198153 complement(3504786..3506153) 1 NC_010581.1 PFAM: Carbohydrate-selective porin OprB; KEGG: rso:RSp1632 putative porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB 3506153 6198153 Bind_3070 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate-selective porin OprB YP_001834120.1 3504786 R 395963 CDS YP_001834121.1 182679975 6201473 complement(3506413..3507342) 1 NC_010581.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 3507342 6201473 Bind_3071 Beijerinckia indica subsp. indica ATCC 9039 periplasmic binding protein/LacI transcriptional regulator YP_001834121.1 3506413 R 395963 CDS YP_001834122.1 182679976 6201474 complement(3507538..3508728) 1 NC_010581.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO1819 putative L-arabinose transport system permease protein AraH; monosaccharide-transporting ATPase 3508728 6201474 Bind_3072 Beijerinckia indica subsp. indica ATCC 9039 monosaccharide-transporting ATPase YP_001834122.1 3507538 R 395963 CDS YP_001834123.1 182679977 6201475 complement(3508725..3510260) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3209 sugar ABC transporter ATP-binding protein; ABC transporter-like protein 3510260 6201475 Bind_3073 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834123.1 3508725 R 395963 CDS YP_001834124.1 182679978 6201504 complement(3510334..3511398) 1 NC_010581.1 KEGG: bbt:BBta_2137 multiple sugar-binding periplasmic receptor ChvE precursor; multiple sugar-binding periplasmic receptor ChvE 3511398 6201504 Bind_3074 Beijerinckia indica subsp. indica ATCC 9039 multiple sugar-binding periplasmic receptor ChvE YP_001834124.1 3510334 R 395963 CDS YP_001834125.1 182679979 6201505 complement(3511679..3512611) 1 NC_010581.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bbt:BBta_2136 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 3512611 6201505 Bind_3075 Beijerinckia indica subsp. indica ATCC 9039 SMP-30/gluconolaconase/LRE domain-containing protein YP_001834125.1 3511679 R 395963 CDS YP_001834126.1 182679980 6201506 complement(3512645..3513733) 1 NC_010581.1 PFAM: Aldose 1-epimerase; KEGG: xau:Xaut_1020 aldose 1-epimerase; aldose 1-epimerase 3513733 6201506 Bind_3076 Beijerinckia indica subsp. indica ATCC 9039 aldose 1-epimerase YP_001834126.1 3512645 R 395963 CDS YP_001834127.1 182679981 6201491 complement(3513736..3514707) 1 NC_010581.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3205 dehydrogenase; galactose 1-dehydrogenase 3514707 6201491 Bind_3077 Beijerinckia indica subsp. indica ATCC 9039 galactose 1-dehydrogenase YP_001834127.1 3513736 R 395963 CDS YP_001834128.1 182679982 6201492 complement(3514704..3516290) 1 NC_010581.1 PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RS05368 probable ketoglutarate semialdehyde dehydrogenase protein; aldehyde dehydrogenase 3516290 6201492 Bind_3078 Beijerinckia indica subsp. indica ATCC 9039 aldehyde dehydrogenase YP_001834128.1 3514704 R 395963 CDS YP_001834129.1 182679983 6201493 complement(3516296..3517669) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4924 major facilitator superfamily MFS_1; major facilitator transporter 3517669 6201493 Bind_3079 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834129.1 3516296 R 395963 CDS YP_001834130.1 182679984 6199604 complement(3517749..3518681) 1 NC_010581.1 PFAM: dihydrodipicolinate synthetase; KEGG: xau:Xaut_1021 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3518681 6199604 Bind_3080 Beijerinckia indica subsp. indica ATCC 9039 dihydrodipicolinate synthetase YP_001834130.1 3517749 R 395963 CDS YP_001834131.1 182679985 6199605 complement(3518691..3520427) 1 NC_010581.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3520427 6199605 Bind_3081 Beijerinckia indica subsp. indica ATCC 9039 dihydroxy-acid dehydratase YP_001834131.1 3518691 R 395963 CDS YP_001834132.1 182679986 6199606 complement(3520444..3521169) 1 NC_010581.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bra:BRADO1811 putative transcriptional regulatory protein, GntR family; GntR family transcriptional regulator 3521169 6199606 Bind_3082 Beijerinckia indica subsp. indica ATCC 9039 GntR family transcriptional regulator YP_001834132.1 3520444 R 395963 CDS YP_001834133.1 182679987 6201219 complement(3521295..3521525) 1 NC_010581.1 KEGG: bja:blr3200 ABC transporter sugar-binding protein; sugar ABC transporter substrate-binding protein 3521525 6201219 Bind_3083 Beijerinckia indica subsp. indica ATCC 9039 sugar ABC transporter substrate-binding protein YP_001834133.1 3521295 R 395963 CDS YP_001834134.1 182679988 6201220 complement(3521825..3522226) 1 NC_010581.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_4871 putative ferrodoxin; 4Fe-4S ferredoxin 3522226 6201220 Bind_3084 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001834134.1 3521825 R 395963 CDS YP_001834135.1 182679989 6201221 complement(3522223..3523803) 1 NC_010581.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_3287 putative oxidoreductase (AsfA-like), putative L-aspartate oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3523803 6201221 Bind_3085 Beijerinckia indica subsp. indica ATCC 9039 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001834135.1 3522223 R 395963 CDS YP_001834136.1 182679990 6198814 3524283..3525155 1 NC_010581.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: fre:Franean1_2520 taurine dioxygenase; taurine dioxygenase 3525155 6198814 Bind_3086 Beijerinckia indica subsp. indica ATCC 9039 taurine dioxygenase YP_001834136.1 3524283 D 395963 CDS YP_001834137.1 182679991 6198815 3525177..3526241 1 NC_010581.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: swi:Swit_2508 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; aliphatic sulfonate ABC transporter substrate-binding protein 3526241 6198815 Bind_3087 Beijerinckia indica subsp. indica ATCC 9039 aliphatic sulfonate ABC transporter substrate-binding protein YP_001834137.1 3525177 D 395963 CDS YP_001834138.1 182679992 6198816 3526295..3528802 1 NC_010581.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 3528802 6198816 Bind_3088 Beijerinckia indica subsp. indica ATCC 9039 TonB-dependent receptor YP_001834138.1 3526295 D 395963 CDS YP_001834139.1 182679993 6200052 3529892..3530512 1 NC_010581.1 PFAM: protein of unknown function DUF938; KEGG: bam:Bamb_3284 protein of unknown function DUF938; hypothetical protein 3530512 6200052 Bind_3089 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834139.1 3529892 D 395963 CDS YP_001834140.1 182679994 6200153 complement(3530519..3532246) 1 NC_010581.1 PFAM: HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_3300 PAS sensor protein; signal transduction histidine kinase 3532246 6200153 Bind_3090 Beijerinckia indica subsp. indica ATCC 9039 signal transduction histidine kinase YP_001834140.1 3530519 R 395963 CDS YP_001834141.1 182679995 6200154 3532601..3533881 1 NC_010581.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr7329 putative multidrug resistance protein; RND family efflux transporter MFP subunit 3533881 6200154 Bind_3091 Beijerinckia indica subsp. indica ATCC 9039 RND family efflux transporter MFP subunit YP_001834141.1 3532601 D 395963 CDS YP_001834142.1 182679996 6200155 3533943..3537113 1 NC_010581.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3537113 6200155 Bind_3092 Beijerinckia indica subsp. indica ATCC 9039 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001834142.1 3533943 D 395963 CDS YP_001834143.1 182679997 6200714 3537116..3538384 1 NC_010581.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: psa:PST_3772 membrane-bound lytic murein transglycosylase, putative; lytic murein transglycosylase 3538384 6200714 Bind_3093 Beijerinckia indica subsp. indica ATCC 9039 lytic murein transglycosylase YP_001834143.1 3537116 D 395963 CDS YP_001834144.1 182679998 6200715 complement(3538486..3538779) 1 NC_010581.1 hypothetical protein 3538779 6200715 Bind_3094 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834144.1 3538486 R 395963 CDS YP_001834145.1 182679999 6200716 complement(3539168..3540763) 1 NC_010581.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: azc:AZC_2763 pyruvate phosphate dikinase; pyruvate phosphate dikinase 3540763 6200716 Bind_3095 Beijerinckia indica subsp. indica ATCC 9039 pyruvate phosphate dikinase YP_001834145.1 3539168 R 395963 CDS YP_001834146.1 182680000 6199505 complement(3540795..3542738) 1 NC_010581.1 KEGG: bbt:BBta_2339 hypothetical protein; hypothetical protein 3542738 6199505 Bind_3096 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834146.1 3540795 R 395963 CDS YP_001834147.1 182680001 6199506 complement(3543036..3544910) 1 NC_010581.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bja:bll7291 transcriptional regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator 3544910 6199506 Bind_3097 Beijerinckia indica subsp. indica ATCC 9039 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001834147.1 3543036 R 395963 CDS YP_001834148.1 182680002 6199507 3545356..3545565 1 NC_010581.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding; cold-shock DNA-binding domain-containing protein 3545565 6199507 Bind_3098 Beijerinckia indica subsp. indica ATCC 9039 cold-shock DNA-binding domain-containing protein YP_001834148.1 3545356 D 395963 CDS YP_001834149.1 182680003 6198181 complement(3545670..3546086) 1 NC_010581.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dsh:Dshi_0827 cytidine deaminase; cytidine deaminase 3546086 6198181 Bind_3099 Beijerinckia indica subsp. indica ATCC 9039 cytidine deaminase YP_001834149.1 3545670 R 395963 CDS YP_001834150.1 182680004 6198182 3546302..3546514 1 NC_010581.1 KEGG: rru:Rru_A3018 hypothetical protein; hypothetical protein 3546514 6198182 Bind_3100 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834150.1 3546302 D 395963 CDS YP_001834151.1 182680005 6198183 complement(3546652..3546948) 1 NC_010581.1 KEGG: azc:AZC_4179 hypothetical protein; hypothetical protein 3546948 6198183 Bind_3101 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834151.1 3546652 R 395963 CDS YP_001834152.1 182680006 6200639 3547911..3548789 1 NC_010581.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rpa:RPA4748 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 3548789 6200639 Bind_3102 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxybutyryl-CoA dehydrogenase YP_001834152.1 3547911 D 395963 CDS YP_001834153.1 182680007 6200640 3549103..3549672 1 NC_010581.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: azc:AZC_0369 HNH endonuclease; HNH endonuclease 3549672 6200640 Bind_3103 Beijerinckia indica subsp. indica ATCC 9039 HNH endonuclease YP_001834153.1 3549103 D 395963 CDS YP_001834154.1 182680008 6200641 complement(3550261..3552567) 1 NC_010581.1 KEGG: bur:Bcep18194_B0123 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific 3552567 6200641 Bind_3104 Beijerinckia indica subsp. indica ATCC 9039 phospholipase C, phosphocholine-specific YP_001834154.1 3550261 R 395963 CDS YP_001834155.1 182680009 6198261 3553349..3553735 1 NC_010581.1 hypothetical protein 3553735 6198261 Bind_3105 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834155.1 3553349 D 395963 CDS YP_001834156.1 182680010 6198262 complement(3553695..3554453) 1 NC_010581.1 KEGG: mes:Meso_3567 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III 3554453 6198262 Bind_3106 Beijerinckia indica subsp. indica ATCC 9039 endonuclease III YP_001834156.1 3553695 R 395963 CDS YP_001834157.1 182680011 6198263 3554664..3555212 1 NC_010581.1 KEGG: bja:bll0688 hypothetical protein; hypothetical protein 3555212 6198263 Bind_3107 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834157.1 3554664 D 395963 CDS YP_001834158.1 182680012 6198344 complement(3555318..3555584) 1 NC_010581.1 hypothetical protein 3555584 6198344 Bind_3108 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834158.1 3555318 R 395963 CDS YP_001834159.1 182680013 6198345 complement(3555785..3556906) 1 NC_010581.1 KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 3556906 6198345 Bind_3109 Beijerinckia indica subsp. indica ATCC 9039 alanine racemase YP_001834159.1 3555785 R 395963 CDS YP_001834160.1 182680014 6198346 complement(3557075..3557506) 1 NC_010581.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: pfo:Pfl_4503 FxsA; FxsA cytoplasmic membrane protein 3557506 6198346 Bind_3110 Beijerinckia indica subsp. indica ATCC 9039 FxsA cytoplasmic membrane protein YP_001834160.1 3557075 R 395963 CDS YP_001834161.1 182680015 6198322 3557819..3558601 1 NC_010581.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 3558601 6198322 Bind_3111 Beijerinckia indica subsp. indica ATCC 9039 import inner membrane translocase subunit Tim44 YP_001834161.1 3557819 D 395963 CDS YP_001834162.1 182680016 6198323 3558728..3559876 1 NC_010581.1 PFAM: MltA domain protein; 3D domain protein; KEGG: azc:AZC_4601 membrane-bound lytic murein transglycosylase; MltA domain-containing protein 3559876 6198323 Bind_3112 Beijerinckia indica subsp. indica ATCC 9039 MltA domain-containing protein YP_001834162.1 3558728 D 395963 CDS YP_001834163.1 182680017 6198324 3559873..3560508 1 NC_010581.1 PFAM: Smr protein/MutS2; KEGG: rpc:RPC_0301 Smr protein/MutS2; Smr protein/MutS2 3560508 6198324 Bind_3113 Beijerinckia indica subsp. indica ATCC 9039 Smr protein/MutS2 YP_001834163.1 3559873 D 395963 CDS YP_001834164.1 182680018 6198314 3560505..3560867 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: rle:RL0011 putative transcriptional regulator; XRE family transcriptional regulator 3560867 6198314 Bind_3114 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001834164.1 3560505 D 395963 CDS YP_001834165.1 182680019 6198315 3560890..3561306 1 NC_010581.1 PFAM: protein of unknown function DUF1025; KEGG: mex:Mext_2340 protein of unknown function DUF1025; hypothetical protein 3561306 6198315 Bind_3115 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834165.1 3560890 D 395963 CDS YP_001834166.1 182680020 6198316 complement(3561313..3562320) 1 NC_010581.1 SMART: WD-40 repeat protein; KEGG: mex:Mext_2336 WD-40 repeat protein; WD-40 repeat-containing protein 3562320 6198316 Bind_3116 Beijerinckia indica subsp. indica ATCC 9039 WD-40 repeat-containing protein YP_001834166.1 3561313 R 395963 CDS YP_001834167.1 182680021 6198375 complement(3562519..3562860) 1 NC_010581.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: atc:AGR_C_3401 conserved hypothetical protein NMB0773; glutaredoxin-like protein 3562860 6198375 Bind_3117 Beijerinckia indica subsp. indica ATCC 9039 glutaredoxin-like protein YP_001834167.1 3562519 R 395963 CDS YP_001834168.1 182680022 6198376 complement(3563002..3563235) 1 NC_010581.1 PFAM: BolA family protein; KEGG: azc:AZC_2232 BolA-like protein; BolA family protein 3563235 6198376 Bind_3118 Beijerinckia indica subsp. indica ATCC 9039 BolA family protein YP_001834168.1 3563002 R 395963 CDS YP_001834169.1 182680023 6198377 complement(3563497..3565707) 1 NC_010581.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bra:BRADO2785 phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase II 3565707 6198377 Bind_3119 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylformylglycinamidine synthase II YP_001834169.1 3563497 R 395963 CDS YP_001834170.1 182680024 6200838 complement(3565709..3566407) 1 NC_010581.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 3566407 6200838 Bind_3120 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylformylglycinamidine synthase I YP_001834170.1 3565709 R 395963 CDS YP_001834171.1 182680025 6200839 complement(3566529..3566777) 1 NC_010581.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: rpd:RPD_1748 phosphoribosylformylglycinamidine synthase subunit PurS; phosphoribosylformylglycinamidine synthase PurS 3566777 6200839 Bind_3121 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylformylglycinamidine synthase PurS YP_001834171.1 3566529 R 395963 CDS YP_001834172.1 182680026 6200840 complement(3566861..3567655) 1 NC_010581.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3567655 6200840 Bind_3122 Beijerinckia indica subsp. indica ATCC 9039 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001834172.1 3566861 R 395963 CDS YP_001834173.1 182680027 6198293 3568293..3568667 1 NC_010581.1 PFAM: protein of unknown function DUF1476; KEGG: pla:Plav_2590 protein of unknown function DUF1476; hypothetical protein 3568667 6198293 Bind_3123 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834173.1 3568293 D 395963 CDS YP_001834174.1 182680028 6198294 3568723..3569694 1 NC_010581.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bbt:BBta_0401 site-specific tyrosine recombinase XerC; integrase family protein 3569694 6198294 Bind_3124 Beijerinckia indica subsp. indica ATCC 9039 integrase family protein YP_001834174.1 3568723 D 395963 CDS YP_001834175.1 182680029 6198295 3569863..3571713 1 NC_010581.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3571713 6198295 Bind_3125 Beijerinckia indica subsp. indica ATCC 9039 GTP-binding protein LepA YP_001834175.1 3569863 D 395963 CDS YP_001834176.1 182680030 6198280 3571715..3572659 1 NC_010581.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3572659 6198280 Bind_3126 Beijerinckia indica subsp. indica ATCC 9039 glutathione synthetase YP_001834176.1 3571715 D 395963 CDS YP_001834177.1 182680031 6198281 3572656..3575517 1 NC_010581.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3575517 6198281 Bind_3127 Beijerinckia indica subsp. indica ATCC 9039 PII uridylyl-transferase YP_001834177.1 3572656 D 395963 CDS YP_001834178.1 182680032 6198282 complement(3575585..3576085) 1 NC_010581.1 PFAM: DoxX family protein; KEGG: azc:AZC_3487 DoxX family protein; DoxX family protein 3576085 6198282 Bind_3128 Beijerinckia indica subsp. indica ATCC 9039 DoxX family protein YP_001834178.1 3575585 R 395963 CDS YP_001834179.1 182680033 6198221 complement(3576096..3576863) 1 NC_010581.1 KEGG: azc:AZC_3486 hypothetical protein; hypothetical protein 3576863 6198221 Bind_3129 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834179.1 3576096 R 395963 CDS YP_001834180.1 182680034 6198222 complement(3576875..3577753) 1 NC_010581.1 PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: azc:AZC_3485 hypothetical protein; hypothetical protein 3577753 6198222 Bind_3130 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834180.1 3576875 R 395963 CDS YP_001834181.1 182680035 6198223 complement(3577870..3578166) 1 NC_010581.1 KEGG: bbt:BBta_3391 hypothetical protein; hypothetical protein 3578166 6198223 Bind_3131 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834181.1 3577870 R 395963 CDS YP_001834182.1 182680036 6198145 complement(3578241..3578492) 1 NC_010581.1 KEGG: azc:AZC_3484 hypothetical protein; hypothetical protein 3578492 6198145 Bind_3132 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834182.1 3578241 R 395963 CDS YP_001834183.1 182680037 6198146 3578659..3579231 1 NC_010581.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3579231 6198146 Bind_3133 Beijerinckia indica subsp. indica ATCC 9039 RNA polymerase sigma factor YP_001834183.1 3578659 D 395963 CDS YP_001834184.1 182680038 6198147 3579228..3579860 1 NC_010581.1 PFAM: protein of unknown function DUF1109; KEGG: rpe:RPE_1945 protein of unknown function DUF1109; hypothetical protein 3579860 6198147 Bind_3134 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834184.1 3579228 D 395963 CDS YP_001834185.1 182680039 6198156 3579916..3580215 1 NC_010581.1 PFAM: RNA-binding S4 domain protein; KEGG: mes:Meso_3377 RNA-binding S4; RNA-binding S4 domain-containing protein 3580215 6198156 Bind_3135 Beijerinckia indica subsp. indica ATCC 9039 RNA-binding S4 domain-containing protein YP_001834185.1 3579916 D 395963 CDS YP_001834186.1 182680040 6198157 3580640..3580978 1 NC_010581.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rpa:RPA0489 ferredoxin II; 4Fe-4S ferredoxin 3580978 6198157 Bind_3136 Beijerinckia indica subsp. indica ATCC 9039 4Fe-4S ferredoxin YP_001834186.1 3580640 D 395963 CDS YP_001834187.1 182680041 6198158 3581587..3581727 1 NC_010581.1 hypothetical protein 3581727 6198158 Bind_3137 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834187.1 3581587 D 395963 CDS YP_001834188.1 182680042 6201790 3581907..3583013 1 NC_010581.1 PFAM: transcription factor CarD; KEGG: rpc:RPC_0548 transcriptional regulator, CarD family; CarD family transcriptional regulator 3583013 6201790 Bind_3138 Beijerinckia indica subsp. indica ATCC 9039 CarD family transcriptional regulator YP_001834188.1 3581907 D 395963 CDS YP_001834189.1 182680043 6201791 3583245..3584222 1 NC_010581.1 KEGG: rpb:RPB_3347 phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB, PSPase-like; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3584222 6201791 Bind_3139 Beijerinckia indica subsp. indica ATCC 9039 phosphoserine phosphatase SerB YP_001834189.1 3583245 D 395963 CDS YP_001834190.1 182680044 6201792 3584246..3585022 1 NC_010581.1 PFAM: LamB/YcsF family protein; KEGG: rpa:RPA2681 hypothetical protein; LamB/YcsF family protein 3585022 6201792 Bind_3140 Beijerinckia indica subsp. indica ATCC 9039 LamB/YcsF family protein YP_001834190.1 3584246 D 395963 CDS YP_001834191.1 182680045 6201382 3585019..3585738 1 NC_010581.1 PFAM: Allophanate hydrolase subunit 1; KEGG: azc:AZC_4073 putative allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3585738 6201382 Bind_3141 Beijerinckia indica subsp. indica ATCC 9039 allophanate hydrolase subunit 1 YP_001834191.1 3585019 D 395963 CDS YP_001834192.1 182680046 6201383 3585735..3586778 1 NC_010581.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: xau:Xaut_1495 UreA amidolyase related protein; urea amidolyase-like protein 3586778 6201383 Bind_3142 Beijerinckia indica subsp. indica ATCC 9039 urea amidolyase-like protein YP_001834192.1 3585735 D 395963 CDS YP_001834193.1 182680047 6201384 complement(3586769..3587137) 1 NC_010581.1 KEGG: bvi:Bcep1808_3111 flagellar basal body P-ring biosynthesis protein FlgA; flagellar basal body P-ring biosynthesis protein FlgA 3587137 6201384 Bind_3143 Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body P-ring biosynthesis protein FlgA YP_001834193.1 3586769 R 395963 CDS YP_001834194.1 182680048 6199976 complement(3587482..3587940) 1 NC_010581.1 KEGG: nha:Nham_2175 hypothetical protein; hypothetical protein 3587940 6199976 Bind_3144 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834194.1 3587482 R 395963 CDS YP_001834195.1 182680049 6199977 complement(3588423..3589115) 1 NC_010581.1 KEGG: nve:NEMVE_v1g222393 hypothetical protein Pfam: 7tm_1 OPT DUF486 ThiG ABC2_membrane PMT Coat_X Voltage_CLC DUF81 BPD_transp_2 DUF125 PROSITE: G_PROTEIN_RECEP_F1_1 HEXAPEP_TRANSFERASES ALA_RICH GLY_RICH VAL_RICH G_PROTEIN_RECEP_F1_2; hypothetical protein 3589115 6199977 Bind_3145 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834195.1 3588423 R 395963 CDS YP_001834196.1 182680050 6199978 complement(3589413..3590624) 1 NC_010581.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: mex:Mext_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF 3590624 6199978 Bind_3146 Beijerinckia indica subsp. indica ATCC 9039 DNA replication and repair protein RecF YP_001834196.1 3589413 R 395963 CDS YP_001834197.1 182680051 6200910 3590772..3591239 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3591239 6200910 Bind_3147 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001834197.1 3590772 D 395963 CDS YP_001834198.1 182680052 6200911 3591206..3591685 1 NC_010581.1 hypothetical protein 3591685 6200911 Bind_3148 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834198.1 3591206 D 395963 CDS YP_001834199.1 182680053 6200912 complement(3591915..3592379) 1 NC_010581.1 PFAM: ferredoxin; KEGG: mca:MCA0232 ferredoxin, 2Fe-2S; ferredoxin 3592379 6200912 Bind_3149 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin YP_001834199.1 3591915 R 395963 CDS YP_001834200.1 182680054 6201843 3593146..3593505 1 NC_010581.1 KEGG: mex:Mext_0048 hypothetical protein; hypothetical protein 3593505 6201843 Bind_3150 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834200.1 3593146 D 395963 CDS YP_001834201.1 182680055 6201844 complement(3593685..3595544) 1 NC_010581.1 KEGG: rpa:RPA0919 ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 3595544 6201844 Bind_3151 Beijerinckia indica subsp. indica ATCC 9039 lipid ABC transporter ATPase/inner membrane protein YP_001834201.1 3593685 R 395963 CDS YP_001834202.1 182680056 6201845 3596406..3597428 1 NC_010581.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_B0022 hypothetical protein; hopanoid-associated sugar epimerase 3597428 6201845 Bind_3152 Beijerinckia indica subsp. indica ATCC 9039 hopanoid-associated sugar epimerase YP_001834202.1 3596406 D 395963 CDS YP_001834203.1 182680057 6201452 3597425..3598321 1 NC_010581.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: bja:blr3001 hypothetical protein; squalene synthase 3598321 6201452 Bind_3153 Beijerinckia indica subsp. indica ATCC 9039 squalene synthase YP_001834203.1 3597425 D 395963 CDS YP_001834204.1 182680058 6201453 3598324..3599181 1 NC_010581.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bpd:BURPS668_A3277 squalene/phytoene synthase family protein; squalene synthase 3599181 6201453 Bind_3154 Beijerinckia indica subsp. indica ATCC 9039 squalene synthase YP_001834204.1 3598324 D 395963 CDS YP_001834205.1 182680059 6201454 3599181..3600428 1 NC_010581.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase 3600428 6201454 Bind_3155 Beijerinckia indica subsp. indica ATCC 9039 squalene-associated FAD-dependent desaturase YP_001834205.1 3599181 D 395963 CDS YP_001834206.1 182680060 6201551 3600459..3602447 1 NC_010581.1 KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3602447 6201551 Bind_3156 Beijerinckia indica subsp. indica ATCC 9039 squalene-hopene cyclase YP_001834206.1 3600459 D 395963 CDS YP_001834207.1 182680061 6201552 3602451..3603116 1 NC_010581.1 KEGG: bma:BMAA2099 hypothetical protein; hypothetical protein 3603116 6201552 Bind_3157 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834207.1 3602451 D 395963 CDS YP_001834208.1 182680062 6201553 complement(3603126..3604274) 1 NC_010581.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: reh:H16_B2170 predicted Fe-S oxidoreductase; hopanoid biosynthesis associated radical SAM protein HpnH 3604274 6201553 Bind_3158 Beijerinckia indica subsp. indica ATCC 9039 hopanoid biosynthesis associated radical SAM protein HpnH YP_001834208.1 3603126 R 395963 CDS YP_001834209.1 182680063 6201379 3605311..3607974 1 NC_010581.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: rpd:RPD_3569 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN 3607974 6201379 Bind_3159 Beijerinckia indica subsp. indica ATCC 9039 hopanoid biosynthesis associated RND transporter like protein HpnN YP_001834209.1 3605311 D 395963 CDS YP_001834210.1 182680064 6201380 complement(3608055..3609599) 1 NC_010581.1 PFAM: peptidase M48 Ste24p; KEGG: azc:AZC_3720 putative peptidase M48 protein; peptidase M48 Ste24p 3609599 6201380 Bind_3160 Beijerinckia indica subsp. indica ATCC 9039 peptidase M48 Ste24p YP_001834210.1 3608055 R 395963 CDS YP_001834211.1 182680065 6201381 complement(3609603..3610457) 1 NC_010581.1 PFAM: nuclease (SNase domain protein); KEGG: bja:blr0145 hypothetical protein; nuclease 3610457 6201381 Bind_3161 Beijerinckia indica subsp. indica ATCC 9039 nuclease YP_001834211.1 3609603 R 395963 CDS YP_001834212.1 182680066 6200157 complement(3610921..3611352) 1 NC_010581.1 KEGG: oan:Oant_0883 hypothetical protein; hypothetical protein 3611352 6200157 Bind_3162 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834212.1 3610921 R 395963 CDS YP_001834213.1 182680067 6200293 3611760..3612044 1 NC_010581.1 hypothetical protein 3612044 6200293 Bind_3163 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834213.1 3611760 D 395963 CDS YP_001834214.1 182680068 6200294 3612041..3612415 1 NC_010581.1 hypothetical protein 3612415 6200294 Bind_3164 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834214.1 3612041 D 395963 CDS YP_001834215.1 182680069 6200295 3612412..3612801 1 NC_010581.1 PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pna:Pnap_4720 hypothetical protein; single-strand binding protein/primosomal replication protein n 3612801 6200295 Bind_3165 Beijerinckia indica subsp. indica ATCC 9039 single-strand binding protein/primosomal replication protein n YP_001834215.1 3612412 D 395963 CDS YP_001834216.1 182680070 6201322 3612813..3614810 1 NC_010581.1 KEGG: nwi:Nwi_1486 RecA-family ATPase; ATPase-like protein 3614810 6201322 Bind_3166 Beijerinckia indica subsp. indica ATCC 9039 ATPase-like protein YP_001834216.1 3612813 D 395963 CDS YP_001834217.1 182680071 6201323 3615229..3615756 1 NC_010581.1 hypothetical protein 3615756 6201323 Bind_3167 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834217.1 3615229 D 395963 CDS YP_001834218.1 182680072 6201324 3616121..3616429 1 NC_010581.1 hypothetical protein 3616429 6201324 Bind_3168 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834218.1 3616121 D 395963 CDS YP_001834219.1 182680073 6198677 3616431..3617219 1 NC_010581.1 KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein; hypothetical protein 3617219 6198677 Bind_3169 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834219.1 3616431 D 395963 CDS YP_001834220.1 182680074 6198678 3617404..3617781 1 NC_010581.1 KEGG: azc:AZC_2164 hypothetical protein; hypothetical protein 3617781 6198678 Bind_3170 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834220.1 3617404 D 395963 CDS YP_001834221.1 182680075 6199138 3620114..3620512 1 NC_010581.1 KEGG: vha:VIBHAR_01981 hypothetical protein; hypothetical protein 3620512 6199138 Bind_3172 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834221.1 3620114 D 395963 CDS YP_001834222.1 182680076 6199139 3620718..3621200 1 NC_010581.1 KEGG: oan:Oant_1534 hypothetical protein; hypothetical protein 3621200 6199139 Bind_3173 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834222.1 3620718 D 395963 CDS YP_001834223.1 182680077 6199140 complement(3621294..3621572) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1487 helix-turn-helix domain protein; XRE family transcriptional regulator 3621572 6199140 Bind_3174 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001834223.1 3621294 R 395963 CDS YP_001834224.1 182680078 6198401 complement(3621646..3621951) 1 NC_010581.1 KEGG: btr:Btr_0514 hypothetical protein; hypothetical protein 3621951 6198401 Bind_3175 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834224.1 3621646 R 395963 CDS YP_001834225.1 182680079 6198402 complement(3621935..3622192) 1 NC_010581.1 KEGG: azc:AZC_4142 hypothetical protein; hypothetical protein 3622192 6198402 Bind_3176 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834225.1 3621935 R 395963 CDS YP_001834226.1 182680080 6198403 complement(3622541..3622978) 1 NC_010581.1 KEGG: rpc:RPC_1461 hypothetical protein; hypothetical protein 3622978 6198403 Bind_3177 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834226.1 3622541 R 395963 CDS YP_001834227.1 182680081 6199183 complement(3622968..3623249) 1 NC_010581.1 hypothetical protein 3623249 6199183 Bind_3178 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834227.1 3622968 R 395963 CDS YP_001834228.1 182680082 6199184 complement(3623363..3623602) 1 NC_010581.1 hypothetical protein 3623602 6199184 Bind_3179 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834228.1 3623363 R 395963 CDS YP_001834229.1 182680083 6199185 complement(3623757..3624821) 1 NC_010581.1 hypothetical protein 3624821 6199185 Bind_3180 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834229.1 3623757 R 395963 CDS YP_001834230.1 182680084 6199362 complement(3625485..3626039) 1 NC_010581.1 hypothetical protein 3626039 6199362 Bind_3181 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834230.1 3625485 R 395963 CDS YP_001834231.1 182680085 6199363 complement(3626410..3627063) 1 NC_010581.1 KEGG: rle:pRL110239 hypothetical protein; XRE family transcriptional regulator 3627063 6199363 Bind_3182 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001834231.1 3626410 R 395963 CDS YP_001834232.1 182680086 6199364 3627175..3627612 1 NC_010581.1 KEGG: mlo:mlr4044 hypothetical protein; hypothetical protein 3627612 6199364 Bind_3183 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834232.1 3627175 D 395963 CDS YP_001834233.1 182680087 6198458 3627609..3628013 1 NC_010581.1 KEGG: xau:Xaut_3424 hypothetical protein; hypothetical protein 3628013 6198458 Bind_3184 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834233.1 3627609 D 395963 CDS YP_001834234.1 182680088 6198459 3628016..3628300 1 NC_010581.1 hypothetical protein 3628300 6198459 Bind_3185 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834234.1 3628016 D 395963 CDS YP_001834235.1 182680089 6198460 3628293..3628496 1 NC_010581.1 hypothetical protein 3628496 6198460 Bind_3186 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834235.1 3628293 D 395963 CDS YP_001834236.1 182680090 6198444 3628489..3628707 1 NC_010581.1 hypothetical protein 3628707 6198444 Bind_3187 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834236.1 3628489 D 395963 CDS YP_001834237.1 182680091 6198445 3628700..3628897 1 NC_010581.1 hypothetical protein 3628897 6198445 Bind_3188 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834237.1 3628700 D 395963 CDS YP_001834238.1 182680092 6198446 3628935..3629714 1 NC_010581.1 KEGG: oan:Oant_0882 phage integrase family protein; phage integrase family protein 3629714 6198446 Bind_3189 Beijerinckia indica subsp. indica ATCC 9039 phage integrase family protein YP_001834238.1 3628935 D 395963 CDS YP_001834239.1 182680093 6198520 3629787..3629999 1 NC_010581.1 hypothetical protein 3629999 6198520 Bind_3190 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834239.1 3629787 D 395963 CDS YP_001834240.1 182680094 6198521 complement(3630079..3630954) 1 NC_010581.1 hypothetical protein 3630954 6198521 Bind_3191 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834240.1 3630079 R 395963 CDS YP_001834241.1 182680095 6198522 complement(3631021..3633168) 1 NC_010581.1 KEGG: mex:Mext_4027 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polyribonucleotide nucleotidyltransferase 3633168 6198522 Bind_3192 Beijerinckia indica subsp. indica ATCC 9039 polyribonucleotide nucleotidyltransferase YP_001834241.1 3631021 R 395963 CDS YP_001834242.1 182680096 6198768 complement(3633799..3634068) 1 NC_010581.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3634068 rpsO 6198768 rpsO Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S15 YP_001834242.1 3633799 R 395963 CDS YP_001834243.1 182680097 6198769 3634503..3635684 1 NC_010581.1 KEGG: mex:Mext_2688 putative membrane protein of unknown function; integral membrane protein-like protein 3635684 6198769 Bind_3194 Beijerinckia indica subsp. indica ATCC 9039 integral membrane protein-like protein YP_001834243.1 3634503 D 395963 CDS YP_001834244.1 182680098 6198770 complement(3635811..3636740) 1 NC_010581.1 PFAM: protein of unknown function DUF344; KEGG: bcs:BCAN_A0303 protein of unknown function DUF344; hypothetical protein 3636740 6198770 Bind_3195 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834244.1 3635811 R 395963 CDS YP_001834245.1 182680099 6199310 3637251..3638321 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_0196 histidine kinase; histidine kinase 3638321 6199310 Bind_3196 Beijerinckia indica subsp. indica ATCC 9039 histidine kinase YP_001834245.1 3637251 D 395963 CDS YP_001834246.1 182680100 6199311 3638322..3638957 1 NC_010581.1 KEGG: xau:Xaut_1830 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 3638957 6199311 Bind_3197 Beijerinckia indica subsp. indica ATCC 9039 dephospho-CoA kinase YP_001834246.1 3638322 D 395963 CDS YP_001834247.1 182680101 6199312 3638972..3639682 1 NC_010581.1 KEGG: bja:blr0640 DNA polymerase III epsilon chain; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 3639682 6199312 Bind_3198 Beijerinckia indica subsp. indica ATCC 9039 DNA polymerase III subunit epsilon YP_001834247.1 3638972 D 395963 CDS YP_001834248.1 182680102 6199168 3639820..3640380 1 NC_010581.1 KEGG: cel:F53H1.4 F53H1.4c; hypothetical protein 3640380 6199168 Bind_3199 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834248.1 3639820 D 395963 CDS YP_001834249.1 182680103 6199169 complement(3640434..3640916) 1 NC_010581.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 3640916 6199169 Bind_3200 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit SecB YP_001834249.1 3640434 R 395963 CDS YP_001834250.1 182680104 6199170 3641131..3643998 1 NC_010581.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1065 TPR repeat protein; hypothetical protein 3643998 6199170 Bind_3201 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834250.1 3641131 D 395963 CDS YP_001834251.1 182680105 6201216 complement(3644206..3645774) 1 NC_010581.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bbt:BBta_1705 putative oxidoreductase, GMC family; gluconate 2-dehydrogenase (acceptor) 3645774 6201216 Bind_3202 Beijerinckia indica subsp. indica ATCC 9039 gluconate 2-dehydrogenase (acceptor) YP_001834251.1 3644206 R 395963 CDS YP_001834252.1 182680106 6201217 complement(3645801..3646352) 1 NC_010581.1 KEGG: oan:Oant_0061 hypothetical protein; hypothetical protein 3646352 6201217 Bind_3203 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834252.1 3645801 R 395963 CDS YP_001834253.1 182680107 6201218 complement(3646447..3646842) 1 NC_010581.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_1387 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3646842 6201218 Bind_3204 Beijerinckia indica subsp. indica ATCC 9039 glyoxalase/bleomycin resistance protein/dioxygenase YP_001834253.1 3646447 R 395963 CDS YP_001834254.1 182680108 6200386 complement(3646848..3647279) 1 NC_010581.1 PFAM: cytochrome c class I; KEGG: azc:AZC_0960 cytochrome c; cytochrome c class I 3647279 6200386 Bind_3205 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c class I YP_001834254.1 3646848 R 395963 CDS YP_001834255.1 182680109 6200387 3647720..3648661 1 NC_010581.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: nar:Saro_3315 transport-associated; transport-associated 3648661 6200387 Bind_3206 Beijerinckia indica subsp. indica ATCC 9039 transport-associated YP_001834255.1 3647720 D 395963 CDS YP_001834256.1 182680110 6200388 3648885..3649178 1 NC_010581.1 KEGG: pde:Pden_3781 hypothetical protein; hypothetical protein 3649178 6200388 Bind_3207 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834256.1 3648885 D 395963 CDS YP_001834257.1 182680111 6201208 3649529..3649954 1 NC_010581.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bja:bll5071 mechanosensitive channel homolog; large conductance mechanosensitive channel protein 3649954 6201208 Bind_3208 Beijerinckia indica subsp. indica ATCC 9039 large conductance mechanosensitive channel protein YP_001834257.1 3649529 D 395963 CDS YP_001834258.1 182680112 6201209 3650231..3651463 1 NC_010581.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3651463 6201209 Bind_3209 Beijerinckia indica subsp. indica ATCC 9039 aspartate aminotransferase YP_001834258.1 3650231 D 395963 CDS YP_001834259.1 182680113 6201210 complement(3651727..3653034) 1 NC_010581.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 3653034 6201210 Bind_3210 Beijerinckia indica subsp. indica ATCC 9039 5-aminolevulinate synthase YP_001834259.1 3651727 R 395963 CDS YP_001834260.1 182680114 6198566 complement(3653436..3654020) 1 NC_010581.1 KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein 3654020 6198566 Bind_3211 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834260.1 3653436 R 395963 CDS YP_001834261.1 182680115 6198567 complement(3654352..3654951) 1 NC_010581.1 KEGG: aba:Acid345_1413 hypothetical protein; hypothetical protein 3654951 6198567 Bind_3212 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834261.1 3654352 R 395963 CDS YP_001834262.1 182680116 6198568 3655478..3656284 1 NC_010581.1 KEGG: gdi:GDI1670 hypothetical protein; hypothetical protein 3656284 6198568 Bind_3213 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834262.1 3655478 D 395963 CDS YP_001834263.1 182680117 6200158 3657236..3657901 1 NC_010581.1 KEGG: rpb:RPB_3326 hypothetical protein; hypothetical protein 3657901 6200158 Bind_3214 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834263.1 3657236 D 395963 CDS YP_001834264.1 182680118 6200159 complement(3658118..3659551) 1 NC_010581.1 PFAM: aminotransferase class-III; KEGG: rpe:RPE_1819 aminotransferase class-III; class III aminotransferase 3659551 6200159 Bind_3215 Beijerinckia indica subsp. indica ATCC 9039 class III aminotransferase YP_001834264.1 3658118 R 395963 CDS YP_001834265.1 182680119 6198624 complement(3660411..3661202) 1 NC_010581.1 PFAM: inositol monophosphatase; KEGG: mlo:mlr3921 extragenic suppressor protein SuhB; inositol-phosphate phosphatase 3661202 6198624 Bind_3216 Beijerinckia indica subsp. indica ATCC 9039 inositol-phosphate phosphatase YP_001834265.1 3660411 R 395963 CDS YP_001834266.1 182680120 6198625 complement(3661560..3662126) 1 NC_010581.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3662126 6198625 Bind_3217 Beijerinckia indica subsp. indica ATCC 9039 elongation factor P YP_001834266.1 3661560 R 395963 CDS YP_001834267.1 182680121 6198980 complement(3662253..3662687) 1 NC_010581.1 PFAM: protein of unknown function DUF55; KEGG: azc:AZC_0265 hypothetical protein; hypothetical protein 3662687 6198980 Bind_3218 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834267.1 3662253 R 395963 CDS YP_001834268.1 182680122 6198981 complement(3662720..3663727) 1 NC_010581.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3663727 gpsA 6198981 gpsA Beijerinckia indica subsp. indica ATCC 9039 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001834268.1 3662720 R 395963 CDS YP_001834269.1 182680123 6198982 complement(3663842..3664351) 1 NC_010581.1 KEGG: oan:Oant_3315 L-2-amino-thiazoline-4-carboxylic acid hydrolase; L-2-amino-thiazoline-4-carboxylic acid hydrolase 3664351 6198982 Bind_3220 Beijerinckia indica subsp. indica ATCC 9039 L-2-amino-thiazoline-4-carboxylic acid hydrolase YP_001834269.1 3663842 R 395963 CDS YP_001834270.1 182680124 6199046 complement(3664395..3664904) 1 NC_010581.1 PFAM: SCP-like extracellular; KEGG: xau:Xaut_2095 SCP-like extracellular; hypothetical protein 3664904 6199046 Bind_3221 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834270.1 3664395 R 395963 CDS YP_001834271.1 182680125 6199047 complement(3664915..3667515) 1 NC_010581.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 3667515 6199047 Bind_3222 Beijerinckia indica subsp. indica ATCC 9039 MscS mechanosensitive ion channel YP_001834271.1 3664915 R 395963 CDS YP_001834272.1 182680126 6199048 complement(3667763..3668833) 1 NC_010581.1 KEGG: sme:SMc00355 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 3668833 6199048 Bind_3223 Beijerinckia indica subsp. indica ATCC 9039 lysine 2,3-aminomutase YodO family protein YP_001834272.1 3667763 R 395963 CDS YP_001834273.1 182680127 6198936 complement(3668830..3669915) 1 NC_010581.1 PFAM: tRNA synthetase class II (D K and N); KEGG: sme:SMc00356 putative lysyl-tRNA synthetase protein; lysine--tRNA ligase 3669915 6198936 Bind_3224 Beijerinckia indica subsp. indica ATCC 9039 lysine--tRNA ligase YP_001834273.1 3668830 R 395963 CDS YP_001834274.1 182680128 6198937 3670243..3670812 1 NC_010581.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3670812 6198937 Bind_3225 Beijerinckia indica subsp. indica ATCC 9039 elongation factor P YP_001834274.1 3670243 D 395963 CDS YP_001834275.1 182680129 6198938 3670890..3671840 1 NC_010581.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pen:PSEEN3999 threonine dehydratase; hypothetical protein 3671840 6198938 Bind_3226 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834275.1 3670890 D 395963 CDS YP_001834276.1 182680130 6198833 complement(3671878..3672192) 1 NC_010581.1 KEGG: azc:AZC_0441 hypothetical protein; hypothetical protein 3672192 6198833 Bind_3227 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834276.1 3671878 R 395963 CDS YP_001834277.1 182680131 6198834 complement(3672329..3672850) 1 NC_010581.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rsh:Rsph17029_3841 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 3672850 6198834 Bind_3228 Beijerinckia indica subsp. indica ATCC 9039 3-demethylubiquinone-9 3-methyltransferase YP_001834277.1 3672329 R 395963 CDS YP_001834278.1 182680132 6198835 complement(3672940..3673662) 1 NC_010581.1 PFAM: protein of unknown function DUF1428; KEGG: sal:Sala_0015 protein of unknown function DUF1428; hypothetical protein 3673662 6198835 Bind_3229 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834278.1 3672940 R 395963 CDS YP_001834279.1 182680133 6198829 3673780..3674484 1 NC_010581.1 PFAM: helix-turn-helix HxlR type; KEGG: oan:Oant_2549 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3674484 6198829 Bind_3230 Beijerinckia indica subsp. indica ATCC 9039 HxlR family transcriptional regulator YP_001834279.1 3673780 D 395963 CDS YP_001834280.1 182680134 6198830 complement(3674493..3675944) 1 NC_010581.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpe:RPE_2748 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 3675944 6198830 Bind_3231 Beijerinckia indica subsp. indica ATCC 9039 TolC family type I secretion outer membrane protein YP_001834280.1 3674493 R 395963 CDS YP_001834281.1 182680135 6198831 complement(3676326..3677156) 1 NC_010581.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 3677156 6198831 Bind_3232 Beijerinckia indica subsp. indica ATCC 9039 N-formylglutamate amidohydrolase YP_001834281.1 3676326 R 395963 CDS YP_001834282.1 182680136 6198779 3677276..3677716 1 NC_010581.1 PFAM: protein of unknown function DUF1036; KEGG: azc:AZC_0444 hypothetical protein; hypothetical protein 3677716 6198779 Bind_3233 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834282.1 3677276 D 395963 CDS YP_001834283.1 182680137 6198780 complement(3677730..3678704) 1 NC_010581.1 KEGG: ret:RHE_CH03667 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 3678704 6198780 Bind_3234 Beijerinckia indica subsp. indica ATCC 9039 transaldolase B YP_001834283.1 3677730 R 395963 CDS YP_001834284.1 182680138 6198781 complement(3679143..3681086) 1 NC_010581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4428 PAS sensor protein; histidine kinase 3681086 6198781 Bind_3235 Beijerinckia indica subsp. indica ATCC 9039 histidine kinase YP_001834284.1 3679143 R 395963 CDS YP_001834285.1 182680139 6198610 3681536..3681697 1 NC_010581.1 KEGG: pla:Plav_0060 hypothetical protein; hypothetical protein 3681697 6198610 Bind_3236 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834285.1 3681536 D 395963 CDS YP_001834286.1 182680140 6198611 3681847..3682200 1 NC_010581.1 KEGG: bja:bll1466 hypothetical protein; hypothetical protein 3682200 6198611 Bind_3237 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834286.1 3681847 D 395963 CDS YP_001834287.1 182680141 6198612 3682253..3682807 1 NC_010581.1 hypothetical protein 3682807 6198612 Bind_3238 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834287.1 3682253 D 395963 CDS YP_001834288.1 182680142 6198984 complement(3682811..3683518) 1 NC_010581.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3683518 6198984 Bind_3239 Beijerinckia indica subsp. indica ATCC 9039 two-component response regulator YP_001834288.1 3682811 R 395963 CDS YP_001834289.1 182680143 6198985 3684356..3684796 1 NC_010581.1 KEGG: rpe:RPE_1750 hypothetical protein; hypothetical protein 3684796 6198985 Bind_3240 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834289.1 3684356 D 395963 CDS YP_001834290.1 182680144 6198986 3684895..3685467 1 NC_010581.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mes:Meso_3107 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3685467 6198986 Bind_3241 Beijerinckia indica subsp. indica ATCC 9039 ECF subfamily RNA polymerase sigma-24 factor YP_001834290.1 3684895 D 395963 CDS YP_001834291.1 182680145 6198473 3685653..3687050 1 NC_010581.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: mex:Mext_2664 fumarate hydratase, class II; class II fumarate hydratase 3687050 6198473 Bind_3242 Beijerinckia indica subsp. indica ATCC 9039 class II fumarate hydratase YP_001834291.1 3685653 D 395963 CDS YP_001834292.1 182680146 6198474 complement(3687135..3687863) 1 NC_010581.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3687863 6198474 Bind_3243 Beijerinckia indica subsp. indica ATCC 9039 glutamine amidotransferase YP_001834292.1 3687135 R 395963 CDS YP_001834293.1 182680147 6198475 complement(3688152..3688940) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0281 putative short chain dehydrogenase/reductase family member; short-chain dehydrogenase/reductase SDR 3688940 6198475 Bind_3244 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001834293.1 3688152 R 395963 CDS YP_001834294.1 182680148 6198927 complement(3689022..3689495) 1 NC_010581.1 PFAM: protein of unknown function DUF1332; KEGG: bbt:BBta_0275 hypothetical protein; hypothetical protein 3689495 6198927 Bind_3245 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834294.1 3689022 R 395963 CDS YP_001834295.1 182680149 6198928 complement(3689546..3689938) 1 NC_010581.1 hypothetical protein 3689938 6198928 Bind_3246 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834295.1 3689546 R 395963 CDS YP_001834296.1 182680150 6198929 3690289..3692709 1 NC_010581.1 KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 3692709 6198929 Bind_3247 Beijerinckia indica subsp. indica ATCC 9039 phenylalanyl-tRNA synthetase subunit beta YP_001834296.1 3690289 D 395963 CDS YP_001834297.1 182680151 6198786 complement(3692712..3693920) 1 NC_010581.1 PFAM: HI0933 family protein; KEGG: nha:Nham_2553 HI0933-like protein; hypothetical protein 3693920 6198786 Bind_3248 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834297.1 3692712 R 395963 CDS YP_001834298.1 182680152 6198787 complement(3693980..3694525) 1 NC_010581.1 PFAM: protein of unknown function DUF1465; KEGG: nwi:Nwi_2748 protein of unknown function DUF1465; hypothetical protein 3694525 6198787 Bind_3249 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834298.1 3693980 R 395963 CDS YP_001834299.1 182680153 6198788 complement(3694625..3695533) 1 NC_010581.1 PFAM: ribonuclease BN; KEGG: xau:Xaut_0308 putative ribonuclease BN; ribonuclease BN 3695533 6198788 Bind_3250 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease BN YP_001834299.1 3694625 R 395963 CDS YP_001834300.1 182680154 6198860 3695838..3697070 1 NC_010581.1 PFAM: protein of unknown function DUF195; KEGG: azc:AZC_0799 RmuC family protein; hypothetical protein 3697070 6198860 Bind_3251 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834300.1 3695838 D 395963 CDS YP_001834301.1 182680155 6198861 complement(3697089..3698459) 1 NC_010581.1 hypothetical protein 3698459 6198861 Bind_3252 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834301.1 3697089 R 395963 CDS YP_001834302.1 182680156 6198862 complement(3698456..3699838) 1 NC_010581.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA3835 hypothetical protein; Sel1 domain-containing protein 3699838 6198862 Bind_3253 Beijerinckia indica subsp. indica ATCC 9039 Sel1 domain-containing protein YP_001834302.1 3698456 R 395963 CDS YP_001834303.1 182680157 6198712 complement(3700156..3703026) 1 NC_010581.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, SecA subunit; preprotein translocase subunit SecA 3703026 6198712 Bind_3254 Beijerinckia indica subsp. indica ATCC 9039 preprotein translocase subunit SecA YP_001834303.1 3700156 R 395963 CDS YP_001834304.1 182680158 6198713 3703612..3704511 1 NC_010581.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: xau:Xaut_3112 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3704511 6198713 Bind_3255 Beijerinckia indica subsp. indica ATCC 9039 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001834304.1 3703612 D 395963 CDS YP_001834305.1 182680159 6198714 3705010..3706497 1 NC_010581.1 KEGG: gox:GOX0013 hypothetical protein; hypothetical protein 3706497 6198714 Bind_3256 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834305.1 3705010 D 395963 CDS YP_001834306.1 182680160 6199188 3706632..3707012 1 NC_010581.1 PFAM: protein of unknown function DUF488; KEGG: mlo:mll7394 hypothetical protein; hypothetical protein 3707012 6199188 Bind_3257 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834306.1 3706632 D 395963 CDS YP_001834307.1 182680161 6199189 complement(3707047..3709116) 1 NC_010581.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 3709116 6199189 Bind_3258 Beijerinckia indica subsp. indica ATCC 9039 peptidyl-dipeptidase Dcp YP_001834307.1 3707047 R 395963 CDS YP_001834308.1 182680162 6199190 3709221..3709742 1 NC_010581.1 PFAM: UreE urease accessory domain protein; KEGG: bra:BRADO1043 urease accessory protein UreE; UreE urease accessory domain-containing protein 3709742 6199190 Bind_3259 Beijerinckia indica subsp. indica ATCC 9039 UreE urease accessory domain-containing protein YP_001834308.1 3709221 D 395963 CDS YP_001834309.1 182680163 6199171 3709735..3710421 1 NC_010581.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF; urease accessory protein UreF 3710421 6199171 Bind_3260 Beijerinckia indica subsp. indica ATCC 9039 urease accessory protein UreF YP_001834309.1 3709735 D 395963 CDS YP_001834310.1 182680164 6199172 3710536..3711201 1 NC_010581.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG; urease accessory protein UreG 3711201 6199172 Bind_3261 Beijerinckia indica subsp. indica ATCC 9039 urease accessory protein UreG YP_001834310.1 3710536 D 395963 CDS YP_001834311.1 182680165 6199173 complement(3711361..3711675) 1 NC_010581.1 KEGG: mex:Mext_3140 hypothetical protein; hypothetical protein 3711675 6199173 Bind_3262 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834311.1 3711361 R 395963 CDS YP_001834312.1 182680166 6199081 complement(3711780..3712160) 1 NC_010581.1 PFAM: Secreted repeat of unknown function; KEGG: tbd:Tbd_1655 probable transmembrane protein; hypothetical protein 3712160 6199081 Bind_3263 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834312.1 3711780 R 395963 CDS YP_001834313.1 182680167 6199082 complement(3712213..3713202) 1 NC_010581.1 KEGG: pla:Plav_2197 hypothetical protein; hypothetical protein 3713202 6199082 Bind_3264 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834313.1 3712213 R 395963 CDS YP_001834314.1 182680168 6199083 complement(3713205..3714518) 1 NC_010581.1 PFAM: protein of unknown function DUF323; KEGG: pla:Plav_2198 protein of unknown function DUF323; hypothetical protein 3714518 6199083 Bind_3265 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834314.1 3713205 R 395963 CDS YP_001834315.1 182680169 6199014 complement(3714681..3716081) 1 NC_010581.1 KEGG: gsu:GSU2811 cytochrome c Hsc; cytochrome c Hsc 3716081 6199014 Bind_3266 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c Hsc YP_001834315.1 3714681 R 395963 CDS YP_001834316.1 182680170 6199015 complement(3716250..3717158) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1358 transcriptional regulator protein; LysR family transcriptional regulator 3717158 6199015 Bind_3267 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001834316.1 3716250 R 395963 CDS YP_001834317.1 182680171 6199016 3717541..3719232 1 NC_010581.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 3719232 6199016 Bind_3268 Beijerinckia indica subsp. indica ATCC 9039 electron-transferring-flavoprotein dehydrogenase YP_001834317.1 3717541 D 395963 CDS YP_001834318.1 182680172 6198583 3719344..3721617 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_0624 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase 3721617 6198583 Bind_3269 Beijerinckia indica subsp. indica ATCC 9039 3-hydroxyacyl-CoA dehydrogenase YP_001834318.1 3719344 D 395963 CDS YP_001834319.1 182680173 6198584 3721698..3723467 1 NC_010581.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_0623 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3723467 6198584 Bind_3270 Beijerinckia indica subsp. indica ATCC 9039 acyl-CoA dehydrogenase domain-containing protein YP_001834319.1 3721698 D 395963 CDS YP_001834320.1 182680174 6198585 3723552..3724301 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sal:Sala_0178 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit 3724301 6198585 Bind_3271 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein alpha/beta-subunit YP_001834320.1 3723552 D 395963 CDS YP_001834321.1 182680175 6198930 3724378..3725313 1 NC_010581.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: oan:Oant_1012 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha 3725313 6198930 Bind_3272 Beijerinckia indica subsp. indica ATCC 9039 electron transfer flavoprotein subunit alpha YP_001834321.1 3724378 D 395963 CDS YP_001834322.1 182680176 6198931 3725648..3726325 1 NC_010581.1 KEGG: rru:Rru_A1383 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3726325 6198931 Bind_3273 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacid CoA-transferase subunit A YP_001834322.1 3725648 D 395963 CDS YP_001834323.1 182680177 6198932 3726339..3726995 1 NC_010581.1 KEGG: rru:Rru_A1382 butyrate-acetoacetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3726995 6198932 Bind_3274 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacid CoA-transferase subunit B YP_001834323.1 3726339 D 395963 CDS YP_001834324.1 182680178 6200975 3727126..3727935 1 NC_010581.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7857 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 3727935 6200975 Bind_3275 Beijerinckia indica subsp. indica ATCC 9039 enoyl-CoA hydratase/isomerase YP_001834324.1 3727126 D 395963 CDS YP_001834325.1 182680179 6200976 complement(3727964..3728407) 1 NC_010581.1 KEGG: ddi:DDBDRAFT_0167791 hypothetical protein; hypothetical protein 3728407 6200976 Bind_3276 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834325.1 3727964 R 395963 CDS YP_001834326.1 182680180 6200977 complement(3728770..3730101) 1 NC_010581.1 KEGG: gox:GOX2647 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 3730101 6200977 Bind_3277 Beijerinckia indica subsp. indica ATCC 9039 hydroxyacylglutathione hydrolase YP_001834326.1 3728770 R 395963 CDS YP_001834327.1 182680181 6199388 3730422..3731150 1 NC_010581.1 KEGG: bbt:BBta_7127 hypothetical protein; hypothetical protein 3731150 6199388 Bind_3278 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834327.1 3730422 D 395963 CDS YP_001834328.1 182680182 6199389 complement(3731288..3731653) 1 NC_010581.1 KEGG: bra:BRADO0926 hypothetical protein containing two histidine-rich domains; putative signal peptide; hypothetical protein 3731653 6199389 Bind_3279 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834328.1 3731288 R 395963 CDS YP_001834329.1 182680183 6199390 complement(3731933..3732811) 1 NC_010581.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpa:RPA3752 transglutaminase-like domain; transglutaminase domain-containing protein 3732811 6199390 Bind_3280 Beijerinckia indica subsp. indica ATCC 9039 transglutaminase domain-containing protein YP_001834329.1 3731933 R 395963 CDS YP_001834330.1 182680184 6201599 complement(3732808..3735312) 1 NC_010581.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: cak:Caul_2638 protein of unknown function DUF404; hypothetical protein 3735312 6201599 Bind_3281 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834330.1 3732808 R 395963 CDS YP_001834331.1 182680185 6201600 complement(3735422..3735967) 1 NC_010581.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: aae:aq_061 molybdenum cofactor biosynthesis MOG; molybdenum cofactor synthesis domain-containing protein 3735967 6201600 Bind_3282 Beijerinckia indica subsp. indica ATCC 9039 molybdenum cofactor synthesis domain-containing protein YP_001834331.1 3735422 R 395963 CDS YP_001834332.1 182680186 6201601 complement(3736123..3736431) 1 NC_010581.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: rpc:RPC_3187 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 3736431 6201601 Bind_3283 Beijerinckia indica subsp. indica ATCC 9039 XRE family plasmid maintenance system antidote protein YP_001834332.1 3736123 R 395963 CDS YP_001834333.1 182680187 6199419 3736780..3738057 1 NC_010581.1 PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3738057 6199419 Bind_3284 Beijerinckia indica subsp. indica ATCC 9039 extracellular ligand-binding receptor YP_001834333.1 3736780 D 395963 CDS YP_001834334.1 182680188 6199421 complement(3739339..3740010) 1 NC_010581.1 KEGG: scl:sce2908 cell division membrane protein; hypothetical protein 3740010 6199421 Bind_3286 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834334.1 3739339 R 395963 CDS YP_001834335.1 182680189 6201622 complement(3740052..3741065) 1 NC_010581.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: xau:Xaut_1267 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 3741065 6201622 Bind_3287 Beijerinckia indica subsp. indica ATCC 9039 cytochrome d ubiquinol oxidase subunit II YP_001834335.1 3740052 R 395963 CDS YP_001834336.1 182680190 6201623 complement(3741111..3742499) 1 NC_010581.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mes:Meso_4066 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 3742499 6201623 Bind_3288 Beijerinckia indica subsp. indica ATCC 9039 cytochrome bd ubiquinol oxidase subunit I YP_001834336.1 3741111 R 395963 CDS YP_001834337.1 182680191 6201624 complement(3743000..3743254) 1 NC_010581.1 hypothetical protein 3743254 6201624 Bind_3289 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834337.1 3743000 R 395963 CDS YP_001834338.1 182680192 6200717 complement(3743256..3743414) 1 NC_010581.1 hypothetical protein 3743414 6200717 Bind_3290 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834338.1 3743256 R 395963 CDS YP_001834339.1 182680193 6200718 complement(3743471..3743626) 1 NC_010581.1 PFAM: protein of unknown function DUF1127; KEGG: oan:Oant_2332 protein of unknown function DUF1127; hypothetical protein 3743626 6200718 Bind_3291 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834339.1 3743471 R 395963 CDS YP_001834340.1 182680194 6200719 complement(3743922..3745208) 1 NC_010581.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_1395 glucose/galactose transporter; glucose/galactose transporter 3745208 6200719 Bind_3292 Beijerinckia indica subsp. indica ATCC 9039 glucose/galactose transporter YP_001834340.1 3743922 R 395963 CDS YP_001834341.1 182680195 6199779 complement(3745371..3746333) 1 NC_010581.1 KEGG: xau:Xaut_4319 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; glucokinase 3746333 6199779 Bind_3293 Beijerinckia indica subsp. indica ATCC 9039 glucokinase YP_001834341.1 3745371 R 395963 CDS YP_001834342.1 182680196 6199780 complement(3746475..3747293) 1 NC_010581.1 PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: fre:Franean1_7058 shikimate dehydrogenase substrate binding domain protein; shikimate dehydrogenase 3747293 6199780 Bind_3294 Beijerinckia indica subsp. indica ATCC 9039 shikimate dehydrogenase YP_001834342.1 3746475 R 395963 CDS YP_001834343.1 182680197 6199781 complement(3747341..3748627) 1 NC_010581.1 PFAM: ROK family protein; KEGG: sil:SPO0860 xylose repressor, putative; ROK family protein 3748627 6199781 Bind_3295 Beijerinckia indica subsp. indica ATCC 9039 ROK family protein YP_001834343.1 3747341 R 395963 CDS YP_001834344.1 182680198 6201607 3748936..3749388 1 NC_010581.1 KEGG: mex:Mext_0614 GatB/YqeY; GatB/YqeY 3749388 6201607 Bind_3296 Beijerinckia indica subsp. indica ATCC 9039 GatB/YqeY YP_001834344.1 3748936 D 395963 CDS YP_001834345.1 182680199 6201608 complement(3749399..3750220) 1 NC_010581.1 KEGG: dol:Dole_1084 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3750220 6201608 Bind_3297 Beijerinckia indica subsp. indica ATCC 9039 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001834345.1 3749399 R 395963 CDS YP_001834346.1 182680200 6201609 3750545..3752542 1 NC_010581.1 KEGG: rpb:RPB_4132 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 3752542 6201609 Bind_3298 Beijerinckia indica subsp. indica ATCC 9039 DNA primase YP_001834346.1 3750545 D 395963 CDS YP_001834347.1 182680201 6200804 3753204..3755261 1 NC_010581.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3755261 6200804 Bind_3299 Beijerinckia indica subsp. indica ATCC 9039 RNA polymerase sigma factor RpoD YP_001834347.1 3753204 D 395963 CDS YP_001834348.1 182680202 6200805 complement(join(3755505..3756116,3756115..3756459)) 1 NC_010581.1 KEGG: nha:Nham_4014 ISSpo6, transposase orf A; transposase 3756459 6200805 Bind_3300 Beijerinckia indica subsp. indica ATCC 9039 transposase YP_001834348.1 3755505 R 395963 CDS YP_001834349.1 182680203 6200806 complement(3756679..3758703) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3956 putative two-component system histidine kinase; integral membrane sensor signal transduction histidine kinase 3758703 6200806 Bind_3301 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834349.1 3756679 R 395963 CDS YP_001834350.1 182680204 6201761 complement(3758700..3759392) 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mlo:mll4419 two-component response regulator; two component transcriptional regulator 3759392 6201761 Bind_3302 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001834350.1 3758700 R 395963 CDS YP_001834351.1 182680205 6201762 complement(3759400..3760941) 1 NC_010581.1 KEGG: bja:blr7618 hypothetical protein; hypothetical protein 3760941 6201762 Bind_3303 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834351.1 3759400 R 395963 CDS YP_001834352.1 182680206 6201763 3761100..3761375 1 NC_010581.1 hypothetical protein 3761375 6201763 Bind_3304 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834352.1 3761100 D 395963 CDS YP_001834353.1 182680207 6201395 complement(3761372..3763564) 1 NC_010581.1 TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA4387 possible ferrichrome-iron receptor; outer membrane insertion C-terminal signal 3763564 6201395 Bind_3305 Beijerinckia indica subsp. indica ATCC 9039 outer membrane insertion C-terminal signal YP_001834353.1 3761372 R 395963 CDS YP_001834354.1 182680208 6201396 3763768..3764382 1 NC_010581.1 KEGG: bja:bll2452 hypothetical protein; hypothetical protein 3764382 6201396 Bind_3306 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834354.1 3763768 D 395963 CDS YP_001834355.1 182680209 6201397 complement(3764467..3765087) 1 NC_010581.1 KEGG: azc:AZC_1764 urease beta subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region; urease subunit gamma 3765087 6201397 Bind_3307 Beijerinckia indica subsp. indica ATCC 9039 urease subunit gamma YP_001834355.1 3764467 R 395963 CDS YP_001834356.1 182680210 6200929 complement(3765284..3766096) 1 NC_010581.1 PFAM: Urease accessory protein UreD; KEGG: xau:Xaut_4154 urease accessory protein UreD; urease accessory protein UreD 3766096 6200929 Bind_3308 Beijerinckia indica subsp. indica ATCC 9039 urease accessory protein UreD YP_001834356.1 3765284 R 395963 CDS YP_001834357.1 182680211 6200930 complement(3766173..3766691) 1 NC_010581.1 PFAM: protein of unknown function DUF1178; KEGG: bja:blr0212 hypothetical protein; hypothetical protein 3766691 6200930 Bind_3309 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834357.1 3766173 R 395963 CDS YP_001834358.1 182680212 6200931 complement(3766697..3766984) 1 NC_010581.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: pla:Plav_1737 glutaredoxin 3; glutaredoxin 3 3766984 6200931 Bind_3310 Beijerinckia indica subsp. indica ATCC 9039 glutaredoxin 3 YP_001834358.1 3766697 R 395963 CDS YP_001834359.1 182680213 6201507 3767341..3767907 1 NC_010581.1 KEGG: sme:SMc02769 hypothetical protein; hypothetical protein 3767907 6201507 Bind_3311 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834359.1 3767341 D 395963 CDS YP_001834360.1 182680214 6201508 3768023..3769084 1 NC_010581.1 PFAM: Extensin family protein; KEGG: azc:AZC_4252 putative uncharacterized protein; extensin family protein 3769084 6201508 Bind_3312 Beijerinckia indica subsp. indica ATCC 9039 extensin family protein YP_001834360.1 3768023 D 395963 CDS YP_001834361.1 182680215 6201509 3769240..3769929 1 NC_010581.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain; glutathione S-transferase domain-containing protein 3769929 6201509 Bind_3313 Beijerinckia indica subsp. indica ATCC 9039 glutathione S-transferase domain-containing protein YP_001834361.1 3769240 D 395963 CDS YP_001834362.1 182680216 6199716 3770199..3771377 1 NC_010581.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: mes:Meso_3598 domain of unknown function DUF1730; iron-sulfur cluster binding protein 3771377 6199716 Bind_3314 Beijerinckia indica subsp. indica ATCC 9039 iron-sulfur cluster binding protein YP_001834362.1 3770199 D 395963 CDS YP_001834363.1 182680217 6199717 3771374..3772249 1 NC_010581.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bja:blr6839 hypothetical protein; 3-beta hydroxysteroid dehydrogenase/isomerase 3772249 6199717 Bind_3315 Beijerinckia indica subsp. indica ATCC 9039 3-beta hydroxysteroid dehydrogenase/isomerase YP_001834363.1 3771374 D 395963 CDS YP_001834364.1 182680218 6199718 3772480..3773895 1 NC_010581.1 KEGG: nmu:Nmul_A0298 hypothetical protein; hypothetical protein 3773895 6199718 Bind_3316 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834364.1 3772480 D 395963 CDS YP_001834365.1 182680219 6199730 complement(3773999..3774673) 1 NC_010581.1 KEGG: gdi:GDI0218 hypothetical protein; hypothetical protein 3774673 6199730 Bind_3317 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834365.1 3773999 R 395963 CDS YP_001834366.1 182680220 6199731 complement(3774670..3775683) 1 NC_010581.1 KEGG: gdi:GDI0217 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 3775683 6199731 Bind_3318 Beijerinckia indica subsp. indica ATCC 9039 4-hydroxythreonine-4-phosphate dehydrogenase YP_001834366.1 3774670 R 395963 CDS YP_001834367.1 182680221 6199732 complement(3775982..3777127) 1 NC_010581.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: xau:Xaut_1799 coenzyme PQQ biosynthesis protein E; pyrroloquinoline quinone biosynthesis protein PqqE 3777127 6199732 Bind_3319 Beijerinckia indica subsp. indica ATCC 9039 pyrroloquinoline quinone biosynthesis protein PqqE YP_001834367.1 3775982 R 395963 CDS YP_001834368.1 182680222 6199733 complement(3777124..3777411) 1 NC_010581.1 PFAM: coenzyme PQQ synthesis D; KEGG: rpa:RPA1949 pyrroloquinoline quinone biosynthesis protein D; coenzyme PQQ synthesis D 3777411 6199733 Bind_3320 Beijerinckia indica subsp. indica ATCC 9039 coenzyme PQQ synthesis D YP_001834368.1 3777124 R 395963 CDS YP_001834369.1 182680223 6199734 complement(3777445..3778209) 1 NC_010581.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 3778209 6199734 Bind_3321 Beijerinckia indica subsp. indica ATCC 9039 pyrroloquinoline quinone biosynthesis protein PqqC YP_001834369.1 3777445 R 395963 CDS YP_001834370.1 182680224 6199735 complement(3778206..3779105) 1 NC_010581.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: mex:Mext_1819 coenzyme PQQ biosynthesis protein B; coenzyme PQQ biosynthesis protein B 3779105 6199735 Bind_3322 Beijerinckia indica subsp. indica ATCC 9039 coenzyme PQQ biosynthesis protein B YP_001834370.1 3778206 R 395963 CDS YP_001834371.1 182680225 6200056 complement(3779351..3780634) 1 NC_010581.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mlo:mll4552 intracellular PHB depolymerase; polyhydroxyalkanoate depolymerase 3780634 6200056 Bind_3323 Beijerinckia indica subsp. indica ATCC 9039 polyhydroxyalkanoate depolymerase YP_001834371.1 3779351 R 395963 CDS YP_001834372.1 182680226 6200057 3781610..3782956 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 3782956 6200057 Bind_3324 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834372.1 3781610 D 395963 CDS YP_001834373.1 182680227 6200058 3783270..3783869 1 NC_010581.1 PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver; two component Fis family transcriptional regulator 3783869 6200058 Bind_3325 Beijerinckia indica subsp. indica ATCC 9039 two component Fis family transcriptional regulator YP_001834373.1 3783270 D 395963 CDS YP_001834374.1 182680228 6200150 3784133..3784267 1 NC_010581.1 PFAM: ribosomal protein L34; KEGG: rpe:RPE_0642 ribosomal protein L34; 50S ribosomal protein L34 3784267 6200150 Bind_3326 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L34 YP_001834374.1 3784133 D 395963 CDS YP_001834375.1 182680229 6200151 3784327..3785010 1 NC_010581.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component; ribonuclease P protein component 3785010 6200151 Bind_3327 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease P protein component YP_001834375.1 3784327 D 395963 CDS YP_001834376.1 182680230 6200152 3785007..3786821 1 NC_010581.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: azc:AZC_4053 60 kDa inner membrane protein; 60 kDa inner membrane insertion protein 3786821 6200152 Bind_3328 Beijerinckia indica subsp. indica ATCC 9039 60 kDa inner membrane insertion protein YP_001834376.1 3785007 D 395963 CDS YP_001834377.1 182680231 6201544 3786824..3787558 1 NC_010581.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3787558 engB 6201544 engB Beijerinckia indica subsp. indica ATCC 9039 ribosome biogenesis GTP-binding protein YsxC YP_001834377.1 3786824 D 395963 CDS YP_001834378.1 182680232 6201545 3787668..3788585 1 NC_010581.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: xau:Xaut_0013 acetylglutamate kinase; acetylglutamate kinase 3788585 6201545 Bind_3330 Beijerinckia indica subsp. indica ATCC 9039 acetylglutamate kinase YP_001834378.1 3787668 D 395963 CDS YP_001834379.1 182680233 6201546 3788582..3789388 1 NC_010581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 3789388 6201546 Bind_3331 Beijerinckia indica subsp. indica ATCC 9039 pyrimidine 5'-nucleotidase YP_001834379.1 3788582 D 395963 CDS YP_001834380.1 182680234 6201693 3789459..3790316 1 NC_010581.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: pla:Plav_0267 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3790316 6201693 Bind_3332 Beijerinckia indica subsp. indica ATCC 9039 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_001834380.1 3789459 D 395963 CDS YP_001834381.1 182680235 6201694 3790316..3790798 1 NC_010581.1 KEGG: hau:Haur_5091 hypothetical protein; hypothetical protein 3790798 6201694 Bind_3333 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834381.1 3790316 D 395963 CDS YP_001834382.1 182680236 6201695 complement(3790802..3791557) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA3846 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3791557 6201695 Bind_3334 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001834382.1 3790802 R 395963 CDS YP_001834383.1 182680237 6200459 complement(3791615..3792250) 1 NC_010581.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bja:bll3023 hypothetical protein; phage SPO1 DNA polymerase-like protein 3792250 6200459 Bind_3335 Beijerinckia indica subsp. indica ATCC 9039 phage SPO1 DNA polymerase-like protein YP_001834383.1 3791615 R 395963 CDS YP_001834384.1 182680238 6200460 3792358..3793509 1 NC_010581.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3793509 6200460 Bind_3336 Beijerinckia indica subsp. indica ATCC 9039 succinyl-diaminopimelate desuccinylase YP_001834384.1 3792358 D 395963 CDS YP_001834385.1 182680239 6200461 3793639..3793869 1 NC_010581.1 hypothetical protein 3793869 6200461 Bind_3337 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834385.1 3793639 D 395963 CDS YP_001834386.1 182680240 6200540 3794494..3795135 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: csa:Csal_0179 peroxidase; peroxidase 3795135 6200540 Bind_3339 Beijerinckia indica subsp. indica ATCC 9039 peroxidase YP_001834386.1 3794494 D 395963 CDS YP_001834387.1 182680241 6200541 complement(3795229..3796260) 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase; aldo/keto reductase 3796260 6200541 Bind_3340 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001834387.1 3795229 R 395963 CDS YP_001834388.1 182680242 6200603 complement(3796419..3797282) 1 NC_010581.1 PFAM: cyclase family protein; KEGG: art:Arth_3556 cyclase family protein; cyclase family protein 3797282 6200603 Bind_3341 Beijerinckia indica subsp. indica ATCC 9039 cyclase family protein YP_001834388.1 3796419 R 395963 CDS YP_001834389.1 182680243 6200604 complement(3797224..3798702) 1 NC_010581.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: spe:Spro_3095 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 3798702 6200604 Bind_3342 Beijerinckia indica subsp. indica ATCC 9039 succinate-semialdehyde dehydrogenase YP_001834389.1 3797224 R 395963 CDS YP_001834390.1 182680244 6200636 3798929..3799990 1 NC_010581.1 KEGG: rpc:RPC_0801 hypothetical protein; hypothetical protein 3799990 6200636 Bind_3343 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834390.1 3798929 D 395963 CDS YP_001834391.1 182680245 6200637 3799990..3801027 1 NC_010581.1 PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_6939 hypothetical protein; OmpA/MotB domain-containing protein 3801027 6200637 Bind_3344 Beijerinckia indica subsp. indica ATCC 9039 OmpA/MotB domain-containing protein YP_001834391.1 3799990 D 395963 CDS YP_001834392.1 182680246 6200638 3801141..3801470 1 NC_010581.1 hypothetical protein 3801470 6200638 Bind_3345 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834392.1 3801141 D 395963 CDS YP_001834393.1 182680247 6200650 complement(3801492..3802481) 1 NC_010581.1 PFAM: beta-lactamase domain protein; KEGG: atc:AGR_C_4888 hypothetical protein; beta-lactamase domain-containing protein 3802481 6200650 Bind_3346 Beijerinckia indica subsp. indica ATCC 9039 beta-lactamase domain-containing protein YP_001834393.1 3801492 R 395963 CDS YP_001834394.1 182680248 6200651 complement(3802609..3803262) 1 NC_010581.1 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 3803262 6200651 Bind_3347 Beijerinckia indica subsp. indica ATCC 9039 multiple drug resistance protein MarC YP_001834394.1 3802609 R 395963 CDS YP_001834395.1 182680249 6199257 3803807..3803998 1 NC_010581.1 hypothetical protein 3803998 6199257 Bind_3349 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834395.1 3803807 D 395963 CDS YP_001834396.1 182680250 6199258 3804037..3804312 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1600 hypothetical protein; hypothetical protein 3804312 6199258 Bind_3350 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834396.1 3804037 D 395963 CDS YP_001834397.1 182680251 6200355 3804661..3806316 1 NC_010581.1 KEGG: rpa:RPA0245 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 3806316 6200355 Bind_3351 Beijerinckia indica subsp. indica ATCC 9039 signal recognition particle protein YP_001834397.1 3804661 D 395963 CDS YP_001834398.1 182680252 6200356 3806377..3806739 1 NC_010581.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3806739 rpsP 6200356 rpsP Beijerinckia indica subsp. indica ATCC 9039 30S ribosomal protein S16 YP_001834398.1 3806377 D 395963 CDS YP_001834399.1 182680253 6200357 3806793..3807314 1 NC_010581.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3807314 rimM 6200357 rimM Beijerinckia indica subsp. indica ATCC 9039 16S rRNA-processing protein RimM YP_001834399.1 3806793 D 395963 CDS YP_001834400.1 182680254 6199980 3807311..3808027 1 NC_010581.1 KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 3808027 6199980 Bind_3354 Beijerinckia indica subsp. indica ATCC 9039 tRNA (guanine-N1)-methyltransferase YP_001834400.1 3807311 D 395963 CDS YP_001834401.1 182680255 6199981 complement(3808033..3808269) 1 NC_010581.1 hypothetical protein 3808269 6199981 Bind_3355 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834401.1 3808033 R 395963 CDS YP_001834402.1 182680256 6199982 complement(3808279..3809145) 1 NC_010581.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: bja:bll1421 prephenate dehydratase; prephenate dehydratase 3809145 6199982 Bind_3356 Beijerinckia indica subsp. indica ATCC 9039 prephenate dehydratase YP_001834402.1 3808279 R 395963 CDS YP_001834403.1 182680257 6201626 3809588..3810127 1 NC_010581.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0341 cytochrome c class I; cytochrome c class I 3810127 6201626 Bind_3357 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c class I YP_001834403.1 3809588 D 395963 CDS YP_001834404.1 182680258 6201627 3810316..3812226 1 NC_010581.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_0134 putative ABC transporter solute-binding protein precursor; extracellular solute-binding protein 3812226 6201627 Bind_3358 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001834404.1 3810316 D 395963 CDS YP_001834405.1 182680259 6198906 3812230..3813321 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_7053 putative oligopeptide transport protein (ABC superfamily, membrane); binding-protein-dependent transport system inner membrane protein 3813321 6198906 Bind_3359 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001834405.1 3812230 D 395963 CDS YP_001834406.1 182680260 6198907 3813323..3814519 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3814519 6198907 Bind_3360 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001834406.1 3813323 D 395963 CDS YP_001834407.1 182680261 6198908 3814525..3816177 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1933 ABC transporter related; ABC transporter-like protein 3816177 6198908 Bind_3361 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834407.1 3814525 D 395963 CDS YP_001834408.1 182680262 6199470 3816250..3816648 1 NC_010581.1 PFAM: protein of unknown function DUF423; KEGG: mlo:mll8379 hypothetical protein; hypothetical protein 3816648 6199470 Bind_3362 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834408.1 3816250 D 395963 CDS YP_001834409.1 182680263 6199471 3816822..3817223 1 NC_010581.1 PFAM: response regulator receiver; KEGG: ccr:CC_3015 response regulator; response regulator receiver protein 3817223 6199471 Bind_3363 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001834409.1 3816822 D 395963 CDS YP_001834410.1 182680264 6199472 3817242..3817886 1 NC_010581.1 hypothetical protein 3817886 6199472 Bind_3364 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834410.1 3817242 D 395963 CDS YP_001834411.1 182680265 6198690 3817883..3819850 1 NC_010581.1 PFAM: AsmA family protein; KEGG: rpa:RPA4157 possible AsmA protein, assembly of outer membrane proteins; AsmA family protein 3819850 6198690 Bind_3365 Beijerinckia indica subsp. indica ATCC 9039 AsmA family protein YP_001834411.1 3817883 D 395963 CDS YP_001834412.1 182680266 6198691 3820219..3821070 1 NC_010581.1 TIGRFAM: lytic murein transglycosylase; KEGG: bbt:BBta_4395 putative exported protein of unknown function with transglycolase; lytic murein transglycosylase 3821070 6198691 Bind_3366 Beijerinckia indica subsp. indica ATCC 9039 lytic murein transglycosylase YP_001834412.1 3820219 D 395963 CDS YP_001834413.1 182680267 6198853 complement(3821192..3823519) 1 NC_010581.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cak:Caul_3605 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 3823519 6198853 Bind_3367 Beijerinckia indica subsp. indica ATCC 9039 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_001834413.1 3821192 R 395963 CDS YP_001834414.1 182680268 6198854 complement(3823512..3823985) 1 NC_010581.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: cak:Caul_3606 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3823985 6198854 Bind_3368 Beijerinckia indica subsp. indica ATCC 9039 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001834414.1 3823512 R 395963 CDS YP_001834415.1 182680269 6198855 complement(3824043..3825341) 1 NC_010581.1 PFAM: cytochrome c class I; KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) 3825341 6198855 Bind_3369 Beijerinckia indica subsp. indica ATCC 9039 gluconate 2-dehydrogenase (acceptor) YP_001834415.1 3824043 R 395963 CDS YP_001834416.1 182680270 6201633 complement(3825514..3825927) 1 NC_010581.1 hypothetical protein 3825927 6201633 Bind_3370 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834416.1 3825514 R 395963 CDS YP_001834417.1 182680271 6201634 complement(3826120..3828057) 1 NC_010581.1 KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; hypothetical protein 3828057 6201634 Bind_3371 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834417.1 3826120 R 395963 CDS YP_001834418.1 182680272 6201635 complement(3828200..3828616) 1 NC_010581.1 hypothetical protein 3828616 6201635 Bind_3372 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834418.1 3828200 R 395963 CDS YP_001834419.1 182680273 6201631 complement(3828616..3829020) 1 NC_010581.1 KEGG: lbl:LBL_0298 lipoprotein releasing system, LolE permease component; hypothetical protein 3829020 6201631 Bind_3373 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834419.1 3828616 R 395963 CDS YP_001834420.1 182680274 6201632 complement(3829013..3829786) 1 NC_010581.1 PFAM: protein of unknown function DUF847; KEGG: mlo:mlr8547 hypothetical protein; hypothetical protein 3829786 6201632 Bind_3374 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834420.1 3829013 R 395963 CDS YP_001834421.1 182680275 6199077 complement(3829848..3830090) 1 NC_010581.1 hypothetical protein 3830090 6199077 Bind_3375 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834421.1 3829848 R 395963 CDS YP_001834422.1 182680276 6199078 complement(3830175..3830393) 1 NC_010581.1 hypothetical protein 3830393 6199078 Bind_3376 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834422.1 3830175 R 395963 CDS YP_001834423.1 182680277 6198471 complement(3830963..3831589) 1 NC_010581.1 PFAM: regulatory protein MerR; KEGG: atu:Atu1181 hypothetical protein; MerR family transcriptional regulator 3831589 6198471 Bind_3377 Beijerinckia indica subsp. indica ATCC 9039 MerR family transcriptional regulator YP_001834423.1 3830963 R 395963 CDS YP_001834424.1 182680278 6198472 complement(3831787..3832164) 1 NC_010581.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: azc:AZC_2293 integration host factor alpha subunit; integration host factor subunit alpha 3832164 6198472 Bind_3378 Beijerinckia indica subsp. indica ATCC 9039 integration host factor subunit alpha YP_001834424.1 3831787 R 395963 CDS YP_001834425.1 182680279 6198399 complement(3832399..3833379) 1 NC_010581.1 KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 3833379 6198399 Bind_3379 Beijerinckia indica subsp. indica ATCC 9039 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001834425.1 3832399 R 395963 CDS YP_001834426.1 182680280 6198400 complement(3833756..3834916) 1 NC_010581.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: atc:AGR_C_2176 fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 3834916 6198400 Bind_3380 Beijerinckia indica subsp. indica ATCC 9039 fatty acid/phospholipid synthesis protein PlsX YP_001834426.1 3833756 R 395963 CDS YP_001834427.1 182680281 6198627 complement(3835302..3835916) 1 NC_010581.1 KEGG: xau:Xaut_4383 hypothetical protein; hypothetical protein 3835916 6198627 Bind_3381 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834427.1 3835302 R 395963 CDS YP_001834428.1 182680282 6198628 complement(3836113..3836718) 1 NC_010581.1 KEGG: mex:Mext_2051 ubiquinol-cytochrome c chaperone; ubiquinol-cytochrome c chaperone 3836718 6198628 Bind_3382 Beijerinckia indica subsp. indica ATCC 9039 ubiquinol-cytochrome c chaperone YP_001834428.1 3836113 R 395963 CDS YP_001834429.1 182680283 6198629 3837541..3838014 1 NC_010581.1 PFAM: SmpA/OmlA domain protein; KEGG: rpa:RPA2737 hypothetical protein; SmpA/OmlA domain-containing protein 3838014 6198629 Bind_3383 Beijerinckia indica subsp. indica ATCC 9039 SmpA/OmlA domain-containing protein YP_001834429.1 3837541 D 395963 CDS YP_001834430.1 182680284 6201687 3838440..3839489 1 NC_010581.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: tbr:Tb10.70.3610 hypothetical protein; endonuclease/exonuclease/phosphatase 3839489 6201687 Bind_3384 Beijerinckia indica subsp. indica ATCC 9039 endonuclease/exonuclease/phosphatase YP_001834430.1 3838440 D 395963 CDS YP_001834431.1 182680285 6201688 complement(3839569..3841413) 1 NC_010581.1 PFAM: glycoside hydrolase 15-related; KEGG: bxe:Bxe_A3307 hypothetical protein; glycoside hydrolase 15-like protein 3841413 6201688 Bind_3385 Beijerinckia indica subsp. indica ATCC 9039 glycoside hydrolase 15-like protein YP_001834431.1 3839569 R 395963 CDS YP_001834432.1 182680286 6201689 complement(3841836..3842783) 1 NC_010581.1 KEGG: bja:blr4624 hypothetical protein; hypothetical protein 3842783 6201689 Bind_3386 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834432.1 3841836 R 395963 CDS YP_001834433.1 182680287 6201705 complement(3843056..3843733) 1 NC_010581.1 PFAM: transcriptional regulator domain protein; KEGG: rle:RL0727 putative two-component regulator transcriptional regulatory protein; two component transcriptional regulator 3843733 6201705 Bind_3387 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001834433.1 3843056 R 395963 CDS YP_001834434.1 182680288 6201706 3844410..3846119 1 NC_010581.1 KEGG: zmo:ZMO1458 hypothetical protein; hypothetical protein 3846119 6201706 Bind_3388 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834434.1 3844410 D 395963 CDS YP_001834435.1 182680289 6201319 3846864..3848552 1 NC_010581.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gdi:GDI0172 pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 3848552 6201319 Bind_3389 Beijerinckia indica subsp. indica ATCC 9039 thiamine pyrophosphate binding domain-containing protein YP_001834435.1 3846864 D 395963 CDS YP_001834436.1 182680290 6201320 3848656..3849981 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: zmo:ZMO1457 MFS permease; major facilitator transporter 3849981 6201320 Bind_3390 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834436.1 3848656 D 395963 CDS YP_001834437.1 182680291 6201321 complement(3849953..3850324) 1 NC_010581.1 KEGG: azc:AZC_0964 hypothetical protein; hypothetical protein 3850324 6201321 Bind_3391 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834437.1 3849953 R 395963 CDS YP_001834438.1 182680292 6201702 complement(3850468..3852537) 1 NC_010581.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: azo:azo1225 sigma-54 dependent transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator 3852537 6201702 Bind_3392 Beijerinckia indica subsp. indica ATCC 9039 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001834438.1 3850468 R 395963 CDS YP_001834439.1 182680293 6201703 complement(3852790..3854433) 1 NC_010581.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 3854433 groEL 6201703 groEL Beijerinckia indica subsp. indica ATCC 9039 chaperonin GroEL YP_001834439.1 3852790 R 395963 CDS YP_001834440.1 182680294 6201704 complement(3854658..3855014) 1 NC_010581.1 KEGG: azo:azo1222 phenol 2-monooxygenase; phenol 2-monooxygenase 3855014 6201704 Bind_3394 Beijerinckia indica subsp. indica ATCC 9039 phenol 2-monooxygenase YP_001834440.1 3854658 R 395963 CDS YP_001834441.1 182680295 6201564 complement(3855208..3856293) 1 NC_010581.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: bbt:BBta_3632 putative methane/phenol/toluene monooxygenase (A subunit, beta chain); methane/phenol/toluene hydroxylase 3856293 6201564 Bind_3395 Beijerinckia indica subsp. indica ATCC 9039 methane/phenol/toluene hydroxylase YP_001834441.1 3855208 R 395963 CDS YP_001834442.1 182680296 6201565 complement(3856357..3857415) 1 NC_010581.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: azo:azo1220 conserved hypothetical aromatic/alkene monooxygenase, subunit gamma; oxidoreductase FAD/NAD(P)-binding subunit 3857415 6201565 Bind_3396 Beijerinckia indica subsp. indica ATCC 9039 oxidoreductase FAD/NAD(P)-binding subunit YP_001834442.1 3856357 R 395963 CDS YP_001834443.1 182680297 6200588 complement(3857579..3859237) 1 NC_010581.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: bja:blr3677 putative monooxygenase component; methane monooxygenase 3859237 6200588 Bind_3397 Beijerinckia indica subsp. indica ATCC 9039 methane monooxygenase YP_001834443.1 3857579 R 395963 CDS YP_001834444.1 182680298 6200589 3859718..3860926 1 NC_010581.1 KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 3860926 6200589 Bind_3398 Beijerinckia indica subsp. indica ATCC 9039 oxygen-independent coproporphyrinogen III oxidase YP_001834444.1 3859718 D 395963 CDS YP_001834445.1 182680299 6200590 complement(3860960..3861310) 1 NC_010581.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: pde:Pden_3135 arsenate reductase; arsenate reductase 3861310 6200590 Bind_3399 Beijerinckia indica subsp. indica ATCC 9039 arsenate reductase YP_001834445.1 3860960 R 395963 CDS YP_001834446.1 182680300 6201718 complement(3861310..3861828) 1 NC_010581.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rpd:RPD_4144 OmpA/MotB; peptidoglycan-associated lipoprotein 3861828 6201718 Bind_3400 Beijerinckia indica subsp. indica ATCC 9039 peptidoglycan-associated lipoprotein YP_001834446.1 3861310 R 395963 CDS YP_001834447.1 182680301 6201719 3862144..3862452 1 NC_010581.1 hypothetical protein 3862452 6201719 Bind_3401 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834447.1 3862144 D 395963 CDS YP_001834448.1 182680302 6201720 3862596..3863486 1 NC_010581.1 PFAM: protein of unknown function UPF0187; KEGG: xcc:XCC3288 hypothetical protein; hypothetical protein 3863486 6201720 Bind_3402 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834448.1 3862596 D 395963 CDS YP_001834449.1 182680303 6201069 3863512..3863736 1 NC_010581.1 hypothetical protein 3863736 6201069 Bind_3403 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834449.1 3863512 D 395963 CDS YP_001834450.1 182680304 6201070 3863733..3864626 1 NC_010581.1 PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase; diaminopimelate epimerase 3864626 6201070 Bind_3404 Beijerinckia indica subsp. indica ATCC 9039 diaminopimelate epimerase YP_001834450.1 3863733 D 395963 CDS YP_001834451.1 182680305 6201593 3864623..3865930 1 NC_010581.1 KEGG: azc:AZC_3709 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 3865930 6201593 Bind_3405 Beijerinckia indica subsp. indica ATCC 9039 MiaB-like tRNA modifying protein YP_001834451.1 3864623 D 395963 CDS YP_001834452.1 182680306 6201594 3865982..3866128 1 NC_010581.1 KEGG: mex:Mext_2511 hypothetical protein; hypothetical protein 3866128 6201594 Bind_3406 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834452.1 3865982 D 395963 CDS YP_001834453.1 182680307 6201595 3866139..3867116 1 NC_010581.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_2512 tyrosine recombinase XerD; integrase family protein 3867116 6201595 Bind_3407 Beijerinckia indica subsp. indica ATCC 9039 integrase family protein YP_001834453.1 3866139 D 395963 CDS YP_001834454.1 182680308 6201298 3867464..3868555 1 NC_010581.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rpa:RPA4780 periplasmic phosphate-binding protein, (PBP); phosphate ABC transporter substrate-binding protein 3868555 6201298 Bind_3408 Beijerinckia indica subsp. indica ATCC 9039 phosphate ABC transporter substrate-binding protein YP_001834454.1 3867464 D 395963 CDS YP_001834455.1 182680309 6201299 3868730..3869716 1 NC_010581.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3722 phosphate ABC transporter, permease protein (PstC); phosphate ABC transporter permease 3869716 6201299 Bind_3409 Beijerinckia indica subsp. indica ATCC 9039 phosphate ABC transporter permease YP_001834455.1 3868730 D 395963 CDS YP_001834456.1 182680310 6201300 3869809..3870648 1 NC_010581.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3720 phosphate transport system permease protein PstA; phosphate ABC transporter permease 3870648 6201300 Bind_3410 Beijerinckia indica subsp. indica ATCC 9039 phosphate ABC transporter permease YP_001834456.1 3869809 D 395963 CDS YP_001834457.1 182680311 6200970 3870645..3871421 1 NC_010581.1 KEGG: rpb:RPB_0779 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 3871421 6200970 Bind_3411 Beijerinckia indica subsp. indica ATCC 9039 phosphate ABC transporter ATPase YP_001834457.1 3870645 D 395963 CDS YP_001834458.1 182680312 6200971 3871491..3872222 1 NC_010581.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 3872222 6200971 Bind_3412 Beijerinckia indica subsp. indica ATCC 9039 phosphate uptake regulator PhoU YP_001834458.1 3871491 D 395963 CDS YP_001834459.1 182680313 6198538 3872219..3872977 1 NC_010581.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0202 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3872977 6198538 Bind_3413 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001834459.1 3872219 D 395963 CDS YP_001834460.1 182680314 6198539 complement(3873078..3874217) 1 NC_010581.1 KEGG: gbe:GbCGDNIH1_1127 hypothetical protein; hypothetical protein 3874217 6198539 Bind_3414 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834460.1 3873078 R 395963 CDS YP_001834461.1 182680315 6198540 complement(3874269..3875249) 1 NC_010581.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 3875249 6198540 Bind_3415 Beijerinckia indica subsp. indica ATCC 9039 mandelate racemase/muconate lactonizing protein YP_001834461.1 3874269 R 395963 CDS YP_001834462.1 182680316 6199004 complement(3875299..3877674) 1 NC_010581.1 KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 3877674 6199004 Bind_3416 Beijerinckia indica subsp. indica ATCC 9039 ribonuclease R YP_001834462.1 3875299 R 395963 CDS YP_001834463.1 182680317 6199005 complement(3877727..3880612) 1 NC_010581.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3880612 6199005 Bind_3417 Beijerinckia indica subsp. indica ATCC 9039 DNA topoisomerase I YP_001834463.1 3877727 R 395963 CDS YP_001834464.1 182680318 6199006 3880910..3881863 1 NC_010581.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3881863 pyrB 6199006 pyrB Beijerinckia indica subsp. indica ATCC 9039 aspartate carbamoyltransferase catalytic subunit YP_001834464.1 3880910 D 395963 CDS YP_001834465.1 182680319 6199008 3881868..3883208 1 NC_010581.1 KEGG: nwi:Nwi_2008 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase, multifunctional complex type 3883208 6199008 Bind_3419 Beijerinckia indica subsp. indica ATCC 9039 dihydroorotase, multifunctional complex type YP_001834465.1 3881868 D 395963 CDS YP_001834466.1 182680320 6199009 3883258..3883851 1 NC_010581.1 PFAM: protein of unknown function DUF205; KEGG: rpb:RPB_2422 hypothetical protein; hypothetical protein 3883851 6199009 Bind_3420 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834466.1 3883258 D 395963 CDS YP_001834467.1 182680321 6199314 3883848..3885137 1 NC_010581.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA; DNA protecting protein DprA 3885137 6199314 Bind_3421 Beijerinckia indica subsp. indica ATCC 9039 DNA protecting protein DprA YP_001834467.1 3883848 D 395963 CDS YP_001834468.1 182680322 6199315 complement(3885167..3885667) 1 NC_010581.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3230 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3885667 6199315 Bind_3422 Beijerinckia indica subsp. indica ATCC 9039 N-acetyltransferase GCN5 YP_001834468.1 3885167 R 395963 CDS YP_001834469.1 182680323 6199316 3885866..3886852 1 NC_010581.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_4784 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 3886852 6199316 Bind_3423 Beijerinckia indica subsp. indica ATCC 9039 Mg2 transporter protein CorA family protein YP_001834469.1 3885866 D 395963 CDS YP_001834470.1 182680324 6198875 3887146..3887898 1 NC_010581.1 PFAM: PRC-barrel domain protein; KEGG: mlo:mll3685 hypothetical protein; PRC-barrel domain-containing protein 3887898 6198875 Bind_3424 Beijerinckia indica subsp. indica ATCC 9039 PRC-barrel domain-containing protein YP_001834470.1 3887146 D 395963 CDS YP_001834471.1 182680325 6198876 3888276..3888572 1 NC_010581.1 required for 70S ribosome assembly; 50S ribosomal protein L28 3888572 rpmB 6198876 rpmB Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L28 YP_001834471.1 3888276 D 395963 CDS YP_001834472.1 182680326 6198877 complement(3888656..3890578) 1 NC_010581.1 KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit 3890578 6198877 Bind_3426 Beijerinckia indica subsp. indica ATCC 9039 cobalt chelatase large subunit YP_001834472.1 3888656 R 395963 CDS YP_001834473.1 182680327 6201258 complement(3890699..3891703) 1 NC_010581.1 KEGG: nwi:Nwi_0403 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit 3891703 6201258 Bind_3427 Beijerinckia indica subsp. indica ATCC 9039 cobalt chelatase small subunit YP_001834473.1 3890699 R 395963 CDS YP_001834474.1 182680328 6201259 complement(3891988..3892608) 1 NC_010581.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 3892608 6201259 Bind_3428 Beijerinckia indica subsp. indica ATCC 9039 heat shock protein DnaJ domain-containing protein YP_001834474.1 3891988 R 395963 CDS YP_001834475.1 182680329 6201071 3892730..3893035 1 NC_010581.1 PFAM: BolA family protein; KEGG: azc:AZC_3676 hypothetical protein; BolA family protein 3893035 6201071 Bind_3429 Beijerinckia indica subsp. indica ATCC 9039 BolA family protein YP_001834475.1 3892730 D 395963 CDS YP_001834476.1 182680330 6201072 3893371..3894756 1 NC_010581.1 KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 3894756 6201072 Bind_3430 Beijerinckia indica subsp. indica ATCC 9039 TRAP transporter solute receptor TAXI family protein YP_001834476.1 3893371 D 395963 CDS YP_001834477.1 182680331 6201073 complement(3894887..3897034) 1 NC_010581.1 PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: sen:SACE_6308 glucan 1,4-alpha-glucosidase; glucan 1,4-alpha-glucosidase 3897034 6201073 Bind_3431 Beijerinckia indica subsp. indica ATCC 9039 glucan 1,4-alpha-glucosidase YP_001834477.1 3894887 R 395963 CDS YP_001834478.1 182680332 6201264 3898364..3898813 1 NC_010581.1 PFAM: FMN-binding domain protein; KEGG: rso:RSc0610 putative signal peptide protein; FMN-binding domain-containing protein 3898813 6201264 Bind_3432 Beijerinckia indica subsp. indica ATCC 9039 FMN-binding domain-containing protein YP_001834478.1 3898364 D 395963 CDS YP_001834479.1 182680333 6201265 3898810..3899673 1 NC_010581.1 PFAM: ApbE family lipoprotein; KEGG: rso:RSc0611 probable thiamine biosynthesis lipoprotein ApbE precursor transmembrane; ApbE family lipoprotein 3899673 6201265 Bind_3433 Beijerinckia indica subsp. indica ATCC 9039 ApbE family lipoprotein YP_001834479.1 3898810 D 395963 CDS YP_001834480.1 182680334 6201266 3899670..3900164 1 NC_010581.1 KEGG: rso:RSc0612 probable transmembrane protein; putative transmembrane protein 3900164 6201266 Bind_3434 Beijerinckia indica subsp. indica ATCC 9039 putative transmembrane protein YP_001834480.1 3899670 D 395963 CDS YP_001834481.1 182680335 6200872 3900421..3901386 1 NC_010581.1 KEGG: pnu:Pnuc_0361 conserved hypothetical secreted protein; hypothetical protein 3901386 6200872 Bind_3435 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834481.1 3900421 D 395963 CDS YP_001834482.1 182680336 6200873 complement(3901558..3903318) 1 NC_010581.1 PFAM: AMP-dependent synthetase and ligase; Leucine-rich repeat 2 protein; KEGG: jan:Jann_1256 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3903318 6200873 Bind_3436 Beijerinckia indica subsp. indica ATCC 9039 AMP-dependent synthetase and ligase YP_001834482.1 3901558 R 395963 CDS YP_001834483.1 182680337 6201464 3903671..3903919 1 NC_010581.1 KEGG: rpd:RPD_0857 hypothetical protein; hypothetical protein 3903919 6201464 Bind_3437 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834483.1 3903671 D 395963 CDS YP_001834484.1 182680338 6201465 3904009..3905646 1 NC_010581.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 3905646 mdoD 6201465 mdoD Beijerinckia indica subsp. indica ATCC 9039 glucan biosynthesis protein D YP_001834484.1 3904009 D 395963 CDS YP_001834485.1 182680339 6201466 3905816..3906229 1 NC_010581.1 KEGG: xau:Xaut_3113 hypothetical protein; hypothetical protein 3906229 6201466 Bind_3439 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834485.1 3905816 D 395963 CDS YP_001834486.1 182680340 6201652 3906300..3907121 1 NC_010581.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mlo:mll0250 transcription regulator; IclR family transcriptional regulator 3907121 6201652 Bind_3440 Beijerinckia indica subsp. indica ATCC 9039 IclR family transcriptional regulator YP_001834486.1 3906300 D 395963 CDS YP_001834487.1 182680341 6201653 complement(3907131..3907343) 1 NC_010581.1 hypothetical protein 3907343 6201653 Bind_3441 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834487.1 3907131 R 395963 CDS YP_001834488.1 182680342 6201654 complement(3907406..3908326) 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase; metallophosphoesterase 3908326 6201654 Bind_3442 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001834488.1 3907406 R 395963 CDS YP_001834489.1 182680343 6201549 complement(3908532..3909503) 1 NC_010581.1 PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bja:blr7895 hypothetical protein; rubrerythrin 3909503 6201549 Bind_3443 Beijerinckia indica subsp. indica ATCC 9039 rubrerythrin YP_001834489.1 3908532 R 395963 CDS YP_001834490.1 182680344 6201550 3909742..3910281 1 NC_010581.1 PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase; NUDIX hydrolase 3910281 6201550 Bind_3444 Beijerinckia indica subsp. indica ATCC 9039 NUDIX hydrolase YP_001834490.1 3909742 D 395963 CDS YP_001834491.1 182680345 6201666 3910526..3911017 1 NC_010581.1 KEGG: swi:Swit_3661 hypothetical protein; hypothetical protein 3911017 6201666 Bind_3445 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834491.1 3910526 D 395963 CDS YP_001834492.1 182680346 6201667 complement(3911087..3912553) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gox:GOX0394 two component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 3912553 6201667 Bind_3446 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834492.1 3911087 R 395963 CDS YP_001834493.1 182680347 6201668 complement(3912564..3913397) 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI3420 two component transcriptional regulator; two component transcriptional regulator 3913397 6201668 Bind_3447 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001834493.1 3912564 R 395963 CDS YP_001834494.1 182680348 6201669 3914330..3916309 1 NC_010581.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: mex:Mext_2751 protein of unknown function DUF882; hypothetical protein 3916309 6201669 Bind_3448 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834494.1 3914330 D 395963 CDS YP_001834495.1 182680349 6201670 3916749..3917054 1 NC_010581.1 hypothetical protein 3917054 6201670 Bind_3449 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834495.1 3916749 D 395963 CDS YP_001834496.1 182680350 6201671 3917152..3917688 1 NC_010581.1 KEGG: bbr:BB1818 hypothetical protein; hypothetical protein 3917688 6201671 Bind_3450 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834496.1 3917152 D 395963 CDS YP_001834497.1 182680351 6201691 complement(3917752..3919491) 1 NC_010581.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 3919491 6201691 Bind_3451 Beijerinckia indica subsp. indica ATCC 9039 D-lactate dehydrogenase YP_001834497.1 3917752 R 395963 CDS YP_001834498.1 182680352 6201692 3919886..3920530 1 NC_010581.1 KEGG: ehi:22.t00027 villin-related protein; hypothetical protein 3920530 6201692 Bind_3452 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834498.1 3919886 D 395963 CDS YP_001834499.1 182680353 6201655 3920631..3920891 1 NC_010581.1 hypothetical protein 3920891 6201655 Bind_3453 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834499.1 3920631 D 395963 CDS YP_001834500.1 182680354 6201656 3920924..3921847 1 NC_010581.1 PFAM: band 7 protein; KEGG: mbn:Mboo_1173 band 7 protein; hypothetical protein 3921847 6201656 Bind_3454 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834500.1 3920924 D 395963 CDS YP_001834501.1 182680355 6201657 complement(3921935..3922192) 1 NC_010581.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: swi:Swit_4667 prevent-host-death family protein; prevent-host-death family protein 3922192 6201657 Bind_3455 Beijerinckia indica subsp. indica ATCC 9039 prevent-host-death family protein YP_001834501.1 3921935 R 395963 CDS YP_001834502.1 182680356 6201010 complement(3922302..3923219) 1 NC_010581.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hne:HNE_1468 transcriptional regulator, LysR family; LysR family transcriptional regulator 3923219 6201010 Bind_3456 Beijerinckia indica subsp. indica ATCC 9039 LysR family transcriptional regulator YP_001834502.1 3922302 R 395963 CDS YP_001834503.1 182680357 6201011 3923320..3924753 1 NC_010581.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3924753 6201011 Bind_3457 Beijerinckia indica subsp. indica ATCC 9039 isopropylmalate isomerase large subunit YP_001834503.1 3923320 D 395963 CDS YP_001834504.1 182680358 6201012 3924769..3925386 1 NC_010581.1 KEGG: pfo:Pfl_2359 3-isopropylmalate dehydratase small subunit region; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 3925386 6201012 Bind_3458 Beijerinckia indica subsp. indica ATCC 9039 3-isopropylmalate dehydratase small subunit YP_001834504.1 3924769 D 395963 CDS YP_001834505.1 182680359 6200745 3925383..3926276 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: sec:SC0377 putative hydrolase or acyltransferase; alpha/beta hydrolase fold protein 3926276 6200745 Bind_3459 Beijerinckia indica subsp. indica ATCC 9039 alpha/beta hydrolase fold protein YP_001834505.1 3925383 D 395963 CDS YP_001834506.1 182680360 6200746 complement(3926339..3927658) 1 NC_010581.1 PFAM: sodium:dicarboxylate symporter; KEGG: psp:PSPPH_1577 C4-dicarboxylate transport protein 3; sodium:dicarboxylate symporter 3927658 6200746 Bind_3460 Beijerinckia indica subsp. indica ATCC 9039 sodium:dicarboxylate symporter YP_001834506.1 3926339 R 395963 CDS YP_001834507.1 182680361 6201618 3934434..3935255 1 NC_010581.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: oan:Oant_4151 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3935255 6201618 Bind_3461 Beijerinckia indica subsp. indica ATCC 9039 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001834507.1 3934434 D 395963 CDS YP_001834508.1 182680362 6201062 3935400..3937058 1 NC_010581.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5; extracellular solute-binding protein 3937058 6201062 Bind_3462 Beijerinckia indica subsp. indica ATCC 9039 extracellular solute-binding protein YP_001834508.1 3935400 D 395963 CDS YP_001834509.1 182680363 6201063 3937055..3937975 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3937975 6201063 Bind_3463 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001834509.1 3937055 D 395963 CDS YP_001834510.1 182680364 6198378 3937977..3939038 1 NC_010581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3939038 6198378 Bind_3464 Beijerinckia indica subsp. indica ATCC 9039 binding-protein-dependent transport system inner membrane protein YP_001834510.1 3937977 D 395963 CDS YP_001834511.1 182680365 6198379 3939035..3940681 1 NC_010581.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: csa:Csal_3002 ABC transporter related; ABC transporter-like protein 3940681 6198379 Bind_3465 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834511.1 3939035 D 395963 CDS YP_001834512.1 182680366 6199410 complement(3940758..3941783) 1 NC_010581.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: azc:AZC_0501 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase 3941783 6199410 Bind_3466 Beijerinckia indica subsp. indica ATCC 9039 fructose-bisphosphate aldolase YP_001834512.1 3940758 R 395963 CDS YP_001834513.1 182680367 6199411 complement(3942098..3943327) 1 NC_010581.1 PFAM: phosphoglycerate kinase; KEGG: rpd:RPD_4314 phosphoglycerate kinase; phosphoglycerate kinase 3943327 6199411 Bind_3467 Beijerinckia indica subsp. indica ATCC 9039 phosphoglycerate kinase YP_001834513.1 3942098 R 395963 CDS YP_001834514.1 182680368 6199412 complement(3943324..3944331) 1 NC_010581.1 KEGG: xau:Xaut_3075 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 3944331 6199412 Bind_3468 Beijerinckia indica subsp. indica ATCC 9039 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001834514.1 3943324 R 395963 CDS YP_001834515.1 182680369 6201696 3945207..3945656 1 NC_010581.1 KEGG: rpc:RPC_4765 hypothetical protein; hypothetical protein 3945656 6201696 Bind_3469 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834515.1 3945207 D 395963 CDS YP_001834516.1 182680370 6201697 3945806..3946246 1 NC_010581.1 PFAM: protein of unknown function DUF710; KEGG: azc:AZC_0507 hypothetical protein; hypothetical protein 3946246 6201697 Bind_3470 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834516.1 3945806 D 395963 CDS YP_001834517.1 182680371 6201676 3946524..3947084 1 NC_010581.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rpa:RPA4454 antifreeze protein, type I:5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 3947084 6201676 Bind_3471 Beijerinckia indica subsp. indica ATCC 9039 5-formyltetrahydrofolate cyclo-ligase YP_001834517.1 3946524 D 395963 CDS YP_001834518.1 182680372 6201677 3947137..3947961 1 NC_010581.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase; metallophosphoesterase 3947961 6201677 Bind_3472 Beijerinckia indica subsp. indica ATCC 9039 metallophosphoesterase YP_001834518.1 3947137 D 395963 CDS YP_001834519.1 182680373 6199719 3948071..3948439 1 NC_010581.1 PFAM: copper resistance protein CopC; KEGG: bbt:BBta_p0115 copper resistance protein C; copper resistance protein CopC 3948439 6199719 Bind_3473 Beijerinckia indica subsp. indica ATCC 9039 copper resistance protein CopC YP_001834519.1 3948071 D 395963 CDS YP_001834520.1 182680374 6199720 3948439..3949389 1 NC_010581.1 PFAM: copper resistance D domain protein; KEGG: rpd:RPD_4272 copper resistance D; copper resistance D domain-containing protein 3949389 6199720 Bind_3474 Beijerinckia indica subsp. indica ATCC 9039 copper resistance D domain-containing protein YP_001834520.1 3948439 D 395963 CDS YP_001834521.1 182680375 6201098 3949545..3951740 1 NC_010581.1 KEGG: mex:Mext_1456 hypothetical protein; hypothetical protein 3951740 6201098 Bind_3475 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834521.1 3949545 D 395963 CDS YP_001834522.1 182680376 6201099 complement(3951741..3952802) 1 NC_010581.1 PFAM: ferrochelatase; KEGG: xau:Xaut_2814 ferrochelatase; ferrochelatase 3952802 6201099 Bind_3476 Beijerinckia indica subsp. indica ATCC 9039 ferrochelatase YP_001834522.1 3951741 R 395963 CDS YP_001834523.1 182680377 6201100 complement(3952822..3953256) 1 NC_010581.1 PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_1411 thioesterase superfamily protein; thioesterase superfamily protein 3953256 6201100 Bind_3477 Beijerinckia indica subsp. indica ATCC 9039 thioesterase superfamily protein YP_001834523.1 3952822 R 395963 CDS YP_001834524.1 182680378 6199739 3953528..3955054 1 NC_010581.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mex:Mext_1472 5'-nucleotidase; 5'-nucleotidase domain-containing protein 3955054 6199739 Bind_3478 Beijerinckia indica subsp. indica ATCC 9039 5'-nucleotidase domain-containing protein YP_001834524.1 3953528 D 395963 CDS YP_001834525.1 182680379 6199740 complement(3955102..3956112) 1 NC_010581.1 hypothetical protein 3956112 6199740 Bind_3479 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834525.1 3955102 R 395963 CDS YP_001834526.1 182680380 6199741 complement(3956165..3956773) 1 NC_010581.1 PFAM: protein of unknown function DUF477; KEGG: mlo:mll4125 hypothetical protein; hypothetical protein 3956773 6199741 Bind_3480 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834526.1 3956165 R 395963 CDS YP_001834527.1 182680381 6199962 complement(3956795..3957667) 1 NC_010581.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 protein of unknown function DUF477; hypothetical protein 3957667 6199962 Bind_3481 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834527.1 3956795 R 395963 CDS YP_001834528.1 182680382 6199963 complement(3957838..3958443) 1 NC_010581.1 PFAM: LemA family protein; KEGG: azc:AZC_2562 LemA protein; LemA family protein 3958443 6199963 Bind_3482 Beijerinckia indica subsp. indica ATCC 9039 LemA family protein YP_001834528.1 3957838 R 395963 CDS YP_001834529.1 182680383 6201573 3958912..3959652 1 NC_010581.1 PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_0383 putative exported protein of unknown function; hypothetical protein 3959652 6201573 Bind_3483 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834529.1 3958912 D 395963 CDS YP_001834530.1 182680384 6201574 3960198..3960881 1 NC_010581.1 KEGG: azc:AZC_0753 hypothetical protein; hypothetical protein 3960881 6201574 Bind_3484 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834530.1 3960198 D 395963 CDS YP_001834531.1 182680385 6201575 complement(3960918..3961808) 1 NC_010581.1 PFAM: major intrinsic protein; KEGG: gdi:GDI0872 putative aquaporin; major intrinsic protein 3961808 6201575 Bind_3485 Beijerinckia indica subsp. indica ATCC 9039 major intrinsic protein YP_001834531.1 3960918 R 395963 CDS YP_001834532.1 182680386 6200371 complement(3962009..3962419) 1 NC_010581.1 hypothetical protein 3962419 6200371 Bind_3486 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834532.1 3962009 R 395963 CDS YP_001834533.1 182680387 6200372 complement(3962546..3963802) 1 NC_010581.1 PFAM: Beta-ketoacyl synthase; KEGG: rru:Rru_A0045 beta-ketoacyl synthase; Beta-ketoacyl synthase 3963802 6200372 Bind_3487 Beijerinckia indica subsp. indica ATCC 9039 Beta-ketoacyl synthase YP_001834533.1 3962546 R 395963 CDS YP_001834534.1 182680388 6200373 complement(3963799..3964077) 1 NC_010581.1 KEGG: rru:Rru_A0044 acyl carrier protein; hypothetical protein 3964077 6200373 Bind_3488 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834534.1 3963799 R 395963 CDS YP_001834535.1 182680389 6201596 complement(3964552..3965025) 1 NC_010581.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: azc:AZC_1703 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3965025 6201596 Bind_3489 Beijerinckia indica subsp. indica ATCC 9039 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001834535.1 3964552 R 395963 CDS YP_001834536.1 182680390 6201597 complement(3965102..3966613) 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1860 putative membrane transport protein; major facilitator transporter 3966613 6201597 Bind_3490 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834536.1 3965102 R 395963 CDS YP_001834537.1 182680391 6200643 complement(3966649..3968556) 1 NC_010581.1 KEGG: rru:Rru_A0089 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 3968556 6200643 Bind_3491 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent DNA helicase RecQ YP_001834537.1 3966649 R 395963 CDS YP_001834538.1 182680392 6200645 complement(3968919..3969788) 1 NC_010581.1 KEGG: nha:Nham_2821 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3969788 6200645 Bind_3492 Beijerinckia indica subsp. indica ATCC 9039 nicotinate-nucleotide pyrophosphorylase YP_001834538.1 3968919 R 395963 CDS YP_001834539.1 182680393 6201619 complement(3969804..3971372) 1 NC_010581.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3971372 6201619 Bind_3493 Beijerinckia indica subsp. indica ATCC 9039 L-aspartate oxidase YP_001834539.1 3969804 R 395963 CDS YP_001834540.1 182680394 6201620 complement(3971369..3972400) 1 NC_010581.1 KEGG: nha:Nham_2819 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 3972400 6201620 Bind_3494 Beijerinckia indica subsp. indica ATCC 9039 quinolinate synthetase complex subunit A YP_001834540.1 3971369 R 395963 CDS YP_001834541.1 182680395 6198775 complement(3972521..3973507) 1 NC_010581.1 KEGG: nha:Nham_2818 hypothetical protein; hypothetical protein 3973507 6198775 Bind_3495 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834541.1 3972521 R 395963 CDS YP_001834542.1 182680396 6198776 complement(3973681..3974058) 1 NC_010581.1 PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 protein of unknown function UPF0102; hypothetical protein 3974058 6198776 Bind_3496 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834542.1 3973681 R 395963 CDS YP_001834543.1 182680397 6198716 complement(3974055..3974975) 1 NC_010581.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 3974975 6198716 Bind_3497 Beijerinckia indica subsp. indica ATCC 9039 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001834543.1 3974055 R 395963 CDS YP_001834544.1 182680398 6198717 complement(3975204..3976340) 1 NC_010581.1 PFAM: Mammalian cell entry related domain protein; KEGG: nha:Nham_1923 mammalian cell entry related; hypothetical protein 3976340 6198717 Bind_3498 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834544.1 3975204 R 395963 CDS YP_001834545.1 182680399 6198718 complement(3976340..3977140) 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2214 ATP-binding component of ABC transporter; ABC transporter-like protein 3977140 6198718 Bind_3499 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834545.1 3976340 R 395963 CDS YP_001834546.1 182680400 6199193 complement(3977144..3978274) 1 NC_010581.1 PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 protein of unknown function DUF140; hypothetical protein 3978274 6199193 Bind_3500 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834546.1 3977144 R 395963 CDS YP_001834547.1 182680401 6199194 complement(3978532..3979431) 1 NC_010581.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: xau:Xaut_3546 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 3979431 6199194 Bind_3501 Beijerinckia indica subsp. indica ATCC 9039 dTDP-4-dehydrorhamnose reductase YP_001834547.1 3978532 R 395963 CDS YP_001834548.1 182680402 6199195 complement(3979415..3980506) 1 NC_010581.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rpb:RPB_1562 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3980506 6199195 Bind_3502 Beijerinckia indica subsp. indica ATCC 9039 dTDP-glucose 4,6-dehydratase YP_001834548.1 3979415 R 395963 CDS YP_001834549.1 182680403 6201629 complement(3980503..3981078) 1 NC_010581.1 KEGG: xau:Xaut_3548 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 3981078 6201629 Bind_3503 Beijerinckia indica subsp. indica ATCC 9039 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001834549.1 3980503 R 395963 CDS YP_001834550.1 182680404 6201630 3981272..3981496 1 NC_010581.1 KEGG: rpe:RPE_3364 hypothetical protein; hypothetical protein 3981496 6201630 Bind_3504 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834550.1 3981272 D 395963 CDS YP_001834551.1 182680405 6199414 complement(3981603..3982694) 1 NC_010581.1 KEGG: mex:Mext_0674 conserved hypothetical protein; putative deoxyribonuclease; putative deoxyribonuclease 3982694 6199414 Bind_3505 Beijerinckia indica subsp. indica ATCC 9039 putative deoxyribonuclease YP_001834551.1 3981603 R 395963 CDS YP_001834552.1 182680406 6199415 3983271..3984317 1 NC_010581.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bra:BRADO4908 putative cobalamin synthesis protein CobW; cobalamin biosynthesis protein CobW 3984317 6199415 Bind_3506 Beijerinckia indica subsp. indica ATCC 9039 cobalamin biosynthesis protein CobW YP_001834552.1 3983271 D 395963 CDS YP_001834553.1 182680407 6200402 3984320..3987634 1 NC_010581.1 KEGG: bra:BRADO4907 cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 3987634 6200402 Bind_3507 Beijerinckia indica subsp. indica ATCC 9039 cobaltochelatase subunit CobN YP_001834553.1 3984320 D 395963 CDS YP_001834554.1 182680408 6200403 3987631..3988923 1 NC_010581.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bbt:BBta_3145 putative precorrin-3B synthase (CobG); precorrin-3B synthase 3988923 6200403 Bind_3508 Beijerinckia indica subsp. indica ATCC 9039 precorrin-3B synthase YP_001834554.1 3987631 D 395963 CDS YP_001834555.1 182680409 6200404 3988920..3989549 1 NC_010581.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bvi:Bcep1808_1609 precorrin-8X methylmutase; precorrin-8X methylmutase 3989549 6200404 Bind_3509 Beijerinckia indica subsp. indica ATCC 9039 precorrin-8X methylmutase YP_001834555.1 3988920 D 395963 CDS YP_001834556.1 182680410 6199063 3989546..3990295 1 NC_010581.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 3990295 6199063 Bind_3510 Beijerinckia indica subsp. indica ATCC 9039 precorrin-2 C(20)-methyltransferase YP_001834556.1 3989546 D 395963 CDS YP_001834557.1 182680411 6199064 3990292..3991065 1 NC_010581.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpe:RPE_2223 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 3991065 6199064 Bind_3511 Beijerinckia indica subsp. indica ATCC 9039 precorrin-3B C(17)-methyltransferase YP_001834557.1 3990292 D 395963 CDS YP_001834558.1 182680412 6199065 complement(3991032..3991799) 1 NC_010581.1 KEGG: rpa:RPA2087 cobalt-precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 3991799 6199065 Bind_3512 Beijerinckia indica subsp. indica ATCC 9039 precorrin-6x reductase YP_001834558.1 3991032 R 395963 CDS YP_001834559.1 182680413 6200992 3991829..3993055 1 NC_010581.1 KEGG: xau:Xaut_3280 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 3993055 6200992 Bind_3513 Beijerinckia indica subsp. indica ATCC 9039 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001834559.1 3991829 D 395963 CDS YP_001834560.1 182680414 6200993 3993052..3993429 1 NC_010581.1 KEGG: bbt:BBta_3151 putative CobE protein; putative CobE protein 3993429 6200993 Bind_3514 Beijerinckia indica subsp. indica ATCC 9039 putative CobE protein YP_001834560.1 3993052 D 395963 CDS YP_001834561.1 182680415 6201513 3993426..3994199 1 NC_010581.1 KEGG: bbt:BBta_3152 precorrin-4 C(11)-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 3994199 6201513 Bind_3515 Beijerinckia indica subsp. indica ATCC 9039 precorrin-4 C(11)-methyltransferase YP_001834561.1 3993426 D 395963 CDS YP_001834562.1 182680416 6201514 complement(3994357..3994980) 1 NC_010581.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpe:RPE_2126 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3994980 6201514 Bind_3516 Beijerinckia indica subsp. indica ATCC 9039 filamentation induced by cAMP protein fic YP_001834562.1 3994357 R 395963 CDS YP_001834563.1 182680417 6201515 complement(3995394..3996497) 1 NC_010581.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: bra:BRADO4898 cobalt-precorrin-6A synthase; cobalamin biosynthesis protein CbiD 3996497 6201515 Bind_3517 Beijerinckia indica subsp. indica ATCC 9039 cobalamin biosynthesis protein CbiD YP_001834563.1 3995394 R 395963 CDS YP_001834564.1 182680418 6199051 3996629..3997897 1 NC_010581.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 3997897 6199051 Bind_3518 Beijerinckia indica subsp. indica ATCC 9039 cobyrinic acid a,c-diamide synthase YP_001834564.1 3996629 D 395963 CDS YP_001834565.1 182680419 6199052 3997923..3998627 1 NC_010581.1 PFAM: pseudouridine synthase; KEGG: rpc:RPC_0213 pseudouridine synthase; pseudouridine synthase 3998627 6199052 Bind_3519 Beijerinckia indica subsp. indica ATCC 9039 pseudouridine synthase YP_001834565.1 3997923 D 395963 CDS YP_001834566.1 182680420 6199053 complement(3998731..3999156) 1 NC_010581.1 hypothetical protein 3999156 6199053 Bind_3520 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834566.1 3998731 R 395963 CDS YP_001834567.1 182680421 6199359 complement(3999678..4000841) 1 NC_010581.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4000841 6199359 Bind_3521 Beijerinckia indica subsp. indica ATCC 9039 Sel1 domain-containing protein YP_001834567.1 3999678 R 395963 CDS YP_001834568.1 182680422 6199360 complement(4000841..4001485) 1 NC_010581.1 PFAM: thiamine monophosphate synthase; KEGG: rpe:RPE_4721 thiamine monophosphate synthase; thiamine monophosphate synthase 4001485 6199360 Bind_3522 Beijerinckia indica subsp. indica ATCC 9039 thiamine monophosphate synthase YP_001834568.1 4000841 R 395963 CDS YP_001834569.1 182680423 6199629 4001897..4002724 1 NC_010581.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4201 regulatory protein GntR HTH; GntR family transcriptional regulator 4002724 6199629 Bind_3523 Beijerinckia indica subsp. indica ATCC 9039 GntR family transcriptional regulator YP_001834569.1 4001897 D 395963 CDS YP_001834570.1 182680424 6199630 4003212..4004408 1 NC_010581.1 PFAM: aminotransferase class V; KEGG: mex:Mext_4200 aminotransferase class V; serine--glyoxylate transaminase 4004408 6199630 Bind_3524 Beijerinckia indica subsp. indica ATCC 9039 serine--glyoxylate transaminase YP_001834570.1 4003212 D 395963 CDS YP_001834571.1 182680425 6199631 4004759..4006045 1 NC_010581.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll6038 hypothetical transport protein; major facilitator transporter 4006045 6199631 Bind_3525 Beijerinckia indica subsp. indica ATCC 9039 major facilitator transporter YP_001834571.1 4004759 D 395963 CDS YP_001834572.1 182680426 6200628 complement(4006260..4006715) 1 NC_010581.1 PFAM: PilT protein domain protein; KEGG: rru:Rru_A1709 PilT protein-like; PilT domain-containing protein 4006715 6200628 Bind_3526 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001834572.1 4006260 R 395963 CDS YP_001834573.1 182680427 6200629 complement(4006712..4006960) 1 NC_010581.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rru:Rru_A1710 prevent-host-death protein; prevent-host-death family protein 4006960 6200629 Bind_3527 Beijerinckia indica subsp. indica ATCC 9039 prevent-host-death family protein YP_001834573.1 4006712 R 395963 CDS YP_001834574.1 182680428 6200630 complement(4007298..4008236) 1 NC_010581.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL2334 putative AraC family transcriptional regulator; AraC family transcriptional regulator 4008236 6200630 Bind_3528 Beijerinckia indica subsp. indica ATCC 9039 AraC family transcriptional regulator YP_001834574.1 4007298 R 395963 CDS YP_001834575.1 182680429 6200614 4008463..4009233 1 NC_010581.1 KEGG: rle:RL2333 hypothetical protein; hypothetical protein 4009233 6200614 Bind_3529 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834575.1 4008463 D 395963 CDS YP_001834576.1 182680430 6200616 complement(4009958..4011454) 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: azc:AZC_4070 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4011454 6200616 Bind_3530 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834576.1 4009958 R 395963 CDS YP_001834577.1 182680431 6200613 4012003..4013268 1 NC_010581.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 4013268 6200613 Bind_3531 Beijerinckia indica subsp. indica ATCC 9039 carbamoyl-phosphate synthase small subunit YP_001834577.1 4012003 D 395963 CDS YP_001834578.1 182680432 6200617 4013313..4014005 1 NC_010581.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_1143 putative methyltransferase; type 12 methyltransferase 4014005 6200617 Bind_3532 Beijerinckia indica subsp. indica ATCC 9039 type 12 methyltransferase YP_001834578.1 4013313 D 395963 CDS YP_001834579.1 182680433 6200618 complement(4014015..4014785) 1 NC_010581.1 PFAM: protein of unknown function DUF152; KEGG: rpd:RPD_3877 protein of unknown function DUF152; hypothetical protein 4014785 6200618 Bind_3533 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834579.1 4014015 R 395963 CDS YP_001834580.1 182680434 6200619 complement(4014793..4015953) 1 NC_010581.1 PFAM: protein of unknown function DUF185; KEGG: azc:AZC_3983 hypothetical protein; hypothetical protein 4015953 6200619 Bind_3534 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834580.1 4014793 R 395963 CDS YP_001834581.1 182680435 6201709 complement(4015950..4016777) 1 NC_010581.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4016777 6201709 Bind_3535 Beijerinckia indica subsp. indica ATCC 9039 prolipoprotein diacylglyceryl transferase YP_001834581.1 4015950 R 395963 CDS YP_001834582.1 182680436 6201710 4017014..4017289 1 NC_010581.1 PFAM: protein of unknown function DUF526; KEGG: mlo:mll2675 hypothetical protein; hypothetical protein 4017289 6201710 Bind_3536 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834582.1 4017014 D 395963 CDS YP_001834583.1 182680437 6201711 4017340..4017672 1 NC_010581.1 hypothetical protein 4017672 6201711 Bind_3537 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834583.1 4017340 D 395963 CDS YP_001834584.1 182680438 6198850 4018093..4019235 1 NC_010581.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific); NAD(P) transhydrogenase subunit alpha 4019235 6198850 Bind_3538 Beijerinckia indica subsp. indica ATCC 9039 NAD(P) transhydrogenase subunit alpha YP_001834584.1 4018093 D 395963 CDS YP_001834585.1 182680439 6198851 4019302..4019763 1 NC_010581.1 KEGG: azc:AZC_0431 putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein; putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein 4019763 6198851 Bind_3539 Beijerinckia indica subsp. indica ATCC 9039 putative NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein YP_001834585.1 4019302 D 395963 CDS YP_001834586.1 182680440 6198494 4019768..4021165 1 NC_010581.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: xau:Xaut_1950 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 4021165 6198494 Bind_3540 Beijerinckia indica subsp. indica ATCC 9039 NAD(P)(+) transhydrogenase YP_001834586.1 4019768 D 395963 CDS YP_001834587.1 182680441 6198495 complement(4021242..4021487) 1 NC_010581.1 hypothetical protein 4021487 6198495 Bind_3541 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834587.1 4021242 R 395963 CDS YP_001834588.1 182680442 6198496 4022043..4024109 1 NC_010581.1 KEGG: pna:Pnap_3987 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 4024109 6198496 Bind_3542 Beijerinckia indica subsp. indica ATCC 9039 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane YP_001834588.1 4022043 D 395963 CDS YP_001834589.1 182680443 6201826 complement(4024150..4024752) 1 NC_010581.1 hypothetical protein 4024752 6201826 Bind_3543 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834589.1 4024150 R 395963 CDS YP_001834590.1 182680444 6201827 4025015..4025689 1 NC_010581.1 KEGG: reh:H16_B1863 cysteine dioxygenase type I; cysteine dioxygenase type I 4025689 6201827 Bind_3544 Beijerinckia indica subsp. indica ATCC 9039 cysteine dioxygenase type I YP_001834590.1 4025015 D 395963 CDS YP_001834591.1 182680445 6201828 complement(4025804..4026691) 1 NC_010581.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4026691 6201828 Bind_3545 Beijerinckia indica subsp. indica ATCC 9039 branched-chain amino acid aminotransferase YP_001834591.1 4025804 R 395963 CDS YP_001834592.1 182680446 6199292 4027258..4028079 1 NC_010581.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_2558 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4028079 6199292 Bind_3546 Beijerinckia indica subsp. indica ATCC 9039 two component transcriptional regulator YP_001834592.1 4027258 D 395963 CDS YP_001834593.1 182680447 6199293 4028165..4029535 1 NC_010581.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpa:RPA4367 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4029535 6199293 Bind_3547 Beijerinckia indica subsp. indica ATCC 9039 integral membrane sensor signal transduction histidine kinase YP_001834593.1 4028165 D 395963 CDS YP_001834594.1 182680448 6201437 complement(4029507..4029809) 1 NC_010581.1 PFAM: SirA family protein; KEGG: xau:Xaut_4368 SirA family protein; SirA family protein 4029809 6201437 Bind_3548 Beijerinckia indica subsp. indica ATCC 9039 SirA family protein YP_001834594.1 4029507 R 395963 CDS YP_001834595.1 182680449 6201438 4030305..4031336 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: xau:Xaut_3263 luciferase family protein; luciferase-like monooxygenase 4031336 6201438 Bind_3549 Beijerinckia indica subsp. indica ATCC 9039 luciferase-like monooxygenase YP_001834595.1 4030305 D 395963 CDS YP_001834596.1 182680450 6201439 4032318..4032593 1 NC_010581.1 KEGG: bbt:BBta_4144 hypothetical protein; hypothetical protein 4032593 6201439 Bind_3550 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834596.1 4032318 D 395963 CDS YP_001834597.1 182680451 6201533 complement(4033076..4033342) 1 NC_010581.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 4033342 fliQ 6201533 fliQ Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis protein FliQ YP_001834597.1 4033076 R 395963 CDS YP_001834598.1 182680452 6201534 complement(4033342..4033767) 1 NC_010581.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 4033767 flgD 6201534 flgD Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body rod modification protein YP_001834598.1 4033342 R 395963 CDS YP_001834599.1 182680453 6201535 complement(4033828..4034229) 1 NC_010581.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 4034229 flbT 6201535 flbT Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis repressor FlbT YP_001834599.1 4033828 R 395963 CDS YP_001834600.1 182680454 6201781 complement(4034240..4034515) 1 NC_010581.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 4034515 flaF 6201781 flaF Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis regulatory protein FlaF YP_001834600.1 4034240 R 395963 CDS YP_001834601.1 182680455 6201782 complement(4034610..4035656) 1 NC_010581.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 4035656 flgL 6201782 flgL Beijerinckia indica subsp. indica ATCC 9039 flagellar hook-associated protein FlgL YP_001834601.1 4034610 R 395963 CDS YP_001834602.1 182680456 6200698 complement(4035661..4037142) 1 NC_010581.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 4037142 flgK 6200698 flgK Beijerinckia indica subsp. indica ATCC 9039 flagellar hook-associated protein FlgK YP_001834602.1 4035661 R 395963 CDS YP_001834603.1 182680457 6200699 complement(4037181..4038428) 1 NC_010581.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 4038428 flgE 6200699 flgE Beijerinckia indica subsp. indica ATCC 9039 flagellar hook protein FlgE YP_001834603.1 4037181 R 395963 CDS YP_001834604.1 182680458 6200700 4038881..4040485 1 NC_010581.1 PFAM: Carbohydrate-selective porin OprB; KEGG: zmo:ZMO0064 carbohydrate-selective porin; carbohydrate-selective porin OprB 4040485 6200700 Bind_3558 Beijerinckia indica subsp. indica ATCC 9039 carbohydrate-selective porin OprB YP_001834604.1 4038881 D 395963 CDS YP_001834605.1 182680459 6199600 complement(4040528..4041559) 1 NC_010581.1 KEGG: mex:Mext_1590 conserved hypothetical protein; hypothetical protein 4041559 6199600 Bind_3559 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834605.1 4040528 R 395963 CDS YP_001834606.1 182680460 6199601 4041827..4042348 1 NC_010581.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: rpe:RPE_4828 ChaC family protein; ChaC family protein 4042348 6199601 Bind_3560 Beijerinckia indica subsp. indica ATCC 9039 ChaC family protein YP_001834606.1 4041827 D 395963 CDS YP_001834607.1 182680461 6199602 complement(4042354..4042911) 1 NC_010581.1 KEGG: mex:Mext_1589 hypothetical protein; hypothetical protein 4042911 6199602 Bind_3561 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834607.1 4042354 R 395963 CDS YP_001834608.1 182680462 6199527 complement(4042969..4043763) 1 NC_010581.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4864 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4043763 6199527 Bind_3562 Beijerinckia indica subsp. indica ATCC 9039 phospholipid/glycerol acyltransferase YP_001834608.1 4042969 R 395963 CDS YP_001834609.1 182680463 6199528 complement(4043992..4044234) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; KEGG: cak:Caul_2278 transcriptional regulator, XRE family; XRE family transcriptional regulator 4044234 6199528 Bind_3563 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001834609.1 4043992 R 395963 CDS YP_001834610.1 182680464 6201536 complement(4044246..4044473) 1 NC_010581.1 hypothetical protein 4044473 6201536 Bind_3564 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834610.1 4044246 R 395963 CDS YP_001834611.1 182680465 6201537 complement(4044463..4044924) 1 NC_010581.1 hypothetical protein 4044924 6201537 Bind_3565 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834611.1 4044463 R 395963 CDS YP_001834612.1 182680466 6201538 4045185..4046174 1 NC_010581.1 PFAM: Catalase domain protein; KEGG: bra:BRADO1380 catalase, homologous to the protein SrpA precursor; catalase domain-containing protein 4046174 6201538 Bind_3566 Beijerinckia indica subsp. indica ATCC 9039 catalase domain-containing protein YP_001834612.1 4045185 D 395963 CDS YP_001834613.1 182680467 6200876 complement(4046230..4047498) 1 NC_010581.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4047498 rho 6200876 rho Beijerinckia indica subsp. indica ATCC 9039 transcription termination factor Rho YP_001834613.1 4046230 R 395963 CDS YP_001834614.1 182680468 6200877 complement(4047907..4048338) 1 NC_010581.1 PFAM: conserved hypothetical protein; KEGG: rpd:RPD_0427 conserved hypothetical protein 701; hypothetical protein 4048338 6200877 Bind_3568 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834614.1 4047907 R 395963 CDS YP_001834615.1 182680469 6200878 complement(4048399..4049451) 1 NC_010581.1 KEGG: nha:Nham_2936 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 4049451 6200878 Bind_3569 Beijerinckia indica subsp. indica ATCC 9039 uroporphyrinogen decarboxylase YP_001834615.1 4048399 R 395963 CDS YP_001834616.1 182680470 6200230 4050089..4050943 1 NC_010581.1 PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 protein of unknown function DUF299; hypothetical protein 4050943 6200230 Bind_3570 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834616.1 4050089 D 395963 CDS YP_001834617.1 182680471 6200231 4050975..4051613 1 NC_010581.1 PFAM: Maf family protein; KEGG: nha:Nham_0113 maf protein; Maf family protein 4051613 6200231 Bind_3571 Beijerinckia indica subsp. indica ATCC 9039 Maf family protein YP_001834617.1 4050975 D 395963 CDS YP_001834618.1 182680472 6201485 4051610..4052464 1 NC_010581.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bbt:BBta_1809 shikimate dehydrogenase; shikimate 5-dehydrogenase 4052464 6201485 Bind_3572 Beijerinckia indica subsp. indica ATCC 9039 shikimate 5-dehydrogenase YP_001834618.1 4051610 D 395963 CDS YP_001834619.1 182680473 6201487 4053801..4054133 1 NC_010581.1 KEGG: xau:Xaut_2332 ferredoxin, 2Fe-2S (AaFd4); ferredoxin, 2Fe-2S (AaFd4) 4054133 6201487 Bind_3574 Beijerinckia indica subsp. indica ATCC 9039 ferredoxin, 2Fe-2S (AaFd4) YP_001834619.1 4053801 D 395963 CDS YP_001834620.1 182680474 6200748 4054248..4055837 1 NC_010581.1 PFAM: amine oxidase; KEGG: mca:MCA2837 amine oxidase family, flavin-containing protein; amine oxidase 4055837 6200748 Bind_3575 Beijerinckia indica subsp. indica ATCC 9039 amine oxidase YP_001834620.1 4054248 D 395963 CDS YP_001834621.1 182680475 6200749 4055958..4056947 1 NC_010581.1 PFAM: Luciferase-like monooxygenase; KEGG: bra:BRADO3786 conserved hypothetical protein, putative luciferase-alpha subunit; luciferase-like monooxygenase 4056947 6200749 Bind_3576 Beijerinckia indica subsp. indica ATCC 9039 luciferase-like monooxygenase YP_001834621.1 4055958 D 395963 CDS YP_001834622.1 182680476 6200750 4057030..4058223 1 NC_010581.1 PFAM: dihydroneopterin aldolase; KEGG: gbe:GbCGDNIH1_0762 dihydroneopterin aldolase; dihydroneopterin aldolase 4058223 6200750 Bind_3577 Beijerinckia indica subsp. indica ATCC 9039 dihydroneopterin aldolase YP_001834622.1 4057030 D 395963 CDS YP_001834623.1 182680477 6200915 4058296..4058673 1 NC_010581.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 4058673 6200915 Bind_3578 Beijerinckia indica subsp. indica ATCC 9039 transcriptional coactivator/pterin dehydratase YP_001834623.1 4058296 D 395963 CDS YP_001834624.1 182680478 6200916 complement(4058686..4058949) 1 NC_010581.1 PFAM: protein of unknown function DUF167; KEGG: pde:Pden_2174 protein of unknown function DUF167; hypothetical protein 4058949 6200916 Bind_3579 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834624.1 4058686 R 395963 CDS YP_001834625.1 182680479 6200956 complement(4058998..4060497) 1 NC_010581.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mex:Mext_4125 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase subunit alpha/beta 4060497 6200956 Bind_3580 Beijerinckia indica subsp. indica ATCC 9039 phosphoglucomutase/phosphomannomutase subunit alpha/beta YP_001834625.1 4058998 R 395963 CDS YP_001834626.1 182680480 6200957 complement(4060950..4061546) 1 NC_010581.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 4061546 6200957 Bind_3581 Beijerinckia indica subsp. indica ATCC 9039 peptidyl-tRNA hydrolase YP_001834626.1 4060950 R 395963 CDS YP_001834627.1 182680481 6200958 complement(4061817..4062482) 1 NC_010581.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 4062482 6200958 Bind_3582 Beijerinckia indica subsp. indica ATCC 9039 50S ribosomal protein L25/general stress protein Ctc YP_001834627.1 4061817 R 395963 CDS YP_001834628.1 182680482 6200987 complement(4062627..4063529) 1 NC_010581.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: csa:Csal_0960 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 4063529 6200987 Bind_3583 Beijerinckia indica subsp. indica ATCC 9039 6-phosphogluconate dehydrogenase YP_001834628.1 4062627 R 395963 CDS YP_001834629.1 182680483 6200988 complement(4063796..4064296) 1 NC_010581.1 KEGG: ret:RHE_CH00657 hypothetical conserved membrane protein; hypothetical protein 4064296 6200988 Bind_3584 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834629.1 4063796 R 395963 CDS YP_001834630.1 182680484 6200989 complement(4064616..4065065) 1 NC_010581.1 KEGG: bja:bll6847 hypothetical protein; hypothetical protein 4065065 6200989 Bind_3585 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834630.1 4064616 R 395963 CDS YP_001834631.1 182680485 6201015 complement(4065059..4065502) 1 NC_010581.1 KEGG: mex:Mext_0694 hypothetical protein; hypothetical protein 4065502 6201015 Bind_3586 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834631.1 4065059 R 395963 CDS YP_001834632.1 182680486 6201016 complement(4065548..4066057) 1 NC_010581.1 KEGG: ret:RHE_CH00689 hypothetical protein; hypothetical protein 4066057 6201016 Bind_3587 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834632.1 4065548 R 395963 CDS YP_001834633.1 182680487 6201133 4066406..4068496 1 NC_010581.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4068496 flhA 6201133 flhA Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis protein FlhA YP_001834633.1 4066406 D 395963 CDS YP_001834634.1 182680488 6201134 4068493..4069248 1 NC_010581.1 KEGG: bja:bll6850 flagellar biosynthesis protein FliR; flagellar biosynthesis protein FliR 4069248 6201134 Bind_3589 Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthesis protein FliR YP_001834634.1 4068493 D 395963 CDS YP_001834635.1 182680489 6201135 4069253..4069687 1 NC_010581.1 hypothetical protein 4069687 6201135 Bind_3590 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834635.1 4069253 D 395963 CDS YP_001834636.1 182680490 6201205 complement(4070217..4070918) 1 NC_010581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4070918 6201205 Bind_3591 Beijerinckia indica subsp. indica ATCC 9039 short-chain dehydrogenase/reductase SDR YP_001834636.1 4070217 R 395963 CDS YP_001834637.1 182680491 6201206 4071467..4072333 1 NC_010581.1 KEGG: mex:Mext_4396 hypothetical protein; hypothetical protein 4072333 6201206 Bind_3592 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834637.1 4071467 D 395963 CDS YP_001834638.1 182680492 6201207 4072363..4072620 1 NC_010581.1 KEGG: mms:mma_1043 transcriptional regulator, AraC family; hypothetical protein 4072620 6201207 Bind_3593 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834638.1 4072363 D 395963 CDS YP_001834639.1 182680493 6201252 4072840..4073541 1 NC_010581.1 KEGG: mms:mma_1044 hypothetical protein; permease-like protein 4073541 6201252 Bind_3595 Beijerinckia indica subsp. indica ATCC 9039 permease-like protein YP_001834639.1 4072840 D 395963 CDS YP_001834640.1 182680494 6201316 4073862..4075445 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1436 ABC transporter, duplicated ATPase domains; ABC transporter-like protein 4075445 6201316 Bind_3596 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834640.1 4073862 D 395963 CDS YP_001834641.1 182680495 6201317 complement(4075575..4076138) 1 NC_010581.1 PFAM: cobalbumin biosynthesis protein; KEGG: nar:Saro_0322 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 4076138 6201317 Bind_3597 Beijerinckia indica subsp. indica ATCC 9039 cobalbumin biosynthesis protein YP_001834641.1 4075575 R 395963 CDS YP_001834642.1 182680496 6201318 complement(4076135..4077568) 1 NC_010581.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: xau:Xaut_4724 protein of unknown function DUF955; XRE family transcriptional regulator 4077568 6201318 Bind_3598 Beijerinckia indica subsp. indica ATCC 9039 XRE family transcriptional regulator YP_001834642.1 4076135 R 395963 CDS YP_001834643.1 182680497 6201520 4077695..4078402 1 NC_010581.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: dac:Daci_2921 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4078402 6201520 Bind_3599 Beijerinckia indica subsp. indica ATCC 9039 LuxR family transcriptional regulator YP_001834643.1 4077695 D 395963 CDS YP_001834644.1 182680498 6201521 complement(4078696..4079919) 1 NC_010581.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4079919 6201521 Bind_3600 Beijerinckia indica subsp. indica ATCC 9039 aromatic amino acid aminotransferase YP_001834644.1 4078696 R 395963 CDS YP_001834645.1 182680499 6201522 complement(4080278..4081198) 1 NC_010581.1 hypothetical protein 4081198 6201522 Bind_3601 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834645.1 4080278 R 395963 CDS YP_001834646.1 182680500 6201645 4082059..4083231 1 NC_010581.1 PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1-family ATPase; AFG1 family ATPase 4083231 6201645 Bind_3602 Beijerinckia indica subsp. indica ATCC 9039 AFG1 family ATPase YP_001834646.1 4082059 D 395963 CDS YP_001834647.1 182680501 6201646 4083348..4083965 1 NC_010581.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR; TetR family transcriptional regulator 4083965 6201646 Bind_3603 Beijerinckia indica subsp. indica ATCC 9039 TetR family transcriptional regulator YP_001834647.1 4083348 D 395963 CDS YP_001834648.1 182680502 6201778 4084457..4085419 1 NC_010581.1 TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent; malate dehydrogenase 4085419 6201778 Bind_3604 Beijerinckia indica subsp. indica ATCC 9039 malate dehydrogenase YP_001834648.1 4084457 D 395963 CDS YP_001834649.1 182680503 6201779 4085657..4086889 1 NC_010581.1 KEGG: bbt:BBta_0393 succinyl-CoA synthetase subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 4086889 6201779 Bind_3605 Beijerinckia indica subsp. indica ATCC 9039 succinyl-CoA synthetase subunit beta YP_001834649.1 4085657 D 395963 CDS YP_001834650.1 182680504 6201780 4086889..4087773 1 NC_010581.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: azc:AZC_4014 succinyl-CoA ligase alpha subunit; succinyl-CoA synthetase subunit alpha 4087773 6201780 Bind_3606 Beijerinckia indica subsp. indica ATCC 9039 succinyl-CoA synthetase subunit alpha YP_001834650.1 4086889 D 395963 CDS YP_001834651.1 182680505 6198490 4088441..4091461 1 NC_010581.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 4091461 sucA 6198490 sucA Beijerinckia indica subsp. indica ATCC 9039 2-oxoglutarate dehydrogenase E1 component YP_001834651.1 4088441 D 395963 CDS YP_001834652.1 182680506 6198491 4091690..4092907 1 NC_010581.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: azc:AZC_4011 dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 4092907 6198491 Bind_3608 Beijerinckia indica subsp. indica ATCC 9039 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001834652.1 4091690 D 395963 CDS YP_001834653.1 182680507 6198492 4093119..4094528 1 NC_010581.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: rpc:RPC_0183 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 4094528 6198492 Bind_3609 Beijerinckia indica subsp. indica ATCC 9039 dihydrolipoamide dehydrogenase YP_001834653.1 4093119 D 395963 CDS YP_001834654.1 182680508 6198675 4094682..4094912 1 NC_010581.1 PFAM: SpoVT/AbrB domain protein; KEGG: aav:Aave_0579 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 4094912 6198675 Bind_3610 Beijerinckia indica subsp. indica ATCC 9039 transcriptional regulator/antitoxin MazE YP_001834654.1 4094682 D 395963 CDS YP_001834655.1 182680509 6198676 4094902..4095309 1 NC_010581.1 PFAM: PilT protein domain protein; KEGG: rso:RSc3055 hypothetical protein; PilT domain-containing protein 4095309 6198676 Bind_3611 Beijerinckia indica subsp. indica ATCC 9039 PilT domain-containing protein YP_001834655.1 4094902 D 395963 CDS YP_001834656.1 182680510 6199423 4096013..4097224 1 NC_010581.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: azc:AZC_0903 serine protease; hypothetical protein 4097224 6199423 Bind_3612 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834656.1 4096013 D 395963 CDS YP_001834657.1 182680511 6199425 complement(4097836..4098369) 1 NC_010581.1 PFAM: regulatory protein RecX; KEGG: gbe:GbCGDNIH1_2275 regulatory protein RecX; regulatory protein RecX 4098369 6199425 Bind_3614 Beijerinckia indica subsp. indica ATCC 9039 regulatory protein RecX YP_001834657.1 4097836 R 395963 CDS YP_001834658.1 182680512 6199714 4099841..4100521 1 NC_010581.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpe:RPE_4843 redoxin domain protein; redoxin domain-containing protein 4100521 6199714 Bind_3616 Beijerinckia indica subsp. indica ATCC 9039 redoxin domain-containing protein YP_001834658.1 4099841 D 395963 CDS YP_001834659.1 182680513 6199715 4101179..4103314 1 NC_010581.1 KEGG: rfr:Rfer_3735 twin-arginine translocation pathway signal; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C, phosphocholine-specific 4103314 6199715 Bind_3617 Beijerinckia indica subsp. indica ATCC 9039 phospholipase C, phosphocholine-specific YP_001834659.1 4101179 D 395963 CDS YP_001834660.1 182680514 6199721 complement(4103505..4104023) 1 NC_010581.1 PFAM: membrane protein of uknown function UCP014873; KEGG: mlo:mlr6724 hypothetical protein; hypothetical protein 4104023 6199721 Bind_3618 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834660.1 4103505 R 395963 CDS YP_001834661.1 182680515 6199722 4104145..4105188 1 NC_010581.1 PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr6726 hypothetical protein; hypothetical protein 4105188 6199722 Bind_3619 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834661.1 4104145 D 395963 CDS YP_001834662.1 182680516 6199726 4105495..4107528 1 NC_010581.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cak:Caul_5142 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4107528 6199726 Bind_3620 Beijerinckia indica subsp. indica ATCC 9039 methyl-accepting chemotaxis sensory transducer YP_001834662.1 4105495 D 395963 CDS YP_001834663.1 182680517 6199727 4107607..4107957 1 NC_010581.1 KEGG: acr:Acry_2706 hypothetical protein; hypothetical protein 4107957 6199727 Bind_3621 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834663.1 4107607 D 395963 CDS YP_001834664.1 182680518 6199728 4107954..4108319 1 NC_010581.1 PFAM: response regulator receiver; KEGG: acr:Acry_2707 response regulator receiver protein; response regulator receiver protein 4108319 6199728 Bind_3622 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001834664.1 4107954 D 395963 CDS YP_001834665.1 182680519 6200036 4108455..4110698 1 NC_010581.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: atc:AGR_C_912 chemotaxis protein; CheA signal transduction histidine kinase 4110698 6200036 Bind_3623 Beijerinckia indica subsp. indica ATCC 9039 CheA signal transduction histidine kinase YP_001834665.1 4108455 D 395963 CDS YP_001834666.1 182680520 6200037 4110747..4111226 1 NC_010581.1 PFAM: CheW domain protein; KEGG: acr:Acry_2709 putative CheW protein; CheW protein 4111226 6200037 Bind_3624 Beijerinckia indica subsp. indica ATCC 9039 CheW protein YP_001834666.1 4110747 D 395963 CDS YP_001834667.1 182680521 6200038 4111223..4112119 1 NC_010581.1 PFAM: MCP methyltransferase CheR-type; KEGG: acr:Acry_2710 protein-glutamate O-methyltransferase; chemotaxis protein CheR 4112119 6200038 Bind_3625 Beijerinckia indica subsp. indica ATCC 9039 chemotaxis protein CheR YP_001834667.1 4111223 D 395963 CDS YP_001834668.1 182680522 6200610 4112116..4113198 1 NC_010581.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 4113198 6200610 Bind_3626 Beijerinckia indica subsp. indica ATCC 9039 chemotaxis-specific methylesterase YP_001834668.1 4112116 D 395963 CDS YP_001834669.1 182680523 6200611 4113177..4113566 1 NC_010581.1 PFAM: response regulator receiver; KEGG: cak:Caul_0283 response regulator receiver protein; response regulator receiver protein 4113566 6200611 Bind_3627 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001834669.1 4113177 D 395963 CDS YP_001834670.1 182680524 6200984 4113686..4114228 1 NC_010581.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: acr:Acry_2713 CheD, stimulates methylation of MCP proteins; hypothetical protein 4114228 6200984 Bind_3628 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834670.1 4113686 D 395963 CDS YP_001834671.1 182680525 6200985 4114288..4114704 1 NC_010581.1 KEGG: acr:Acry_2714 hypothetical protein; hypothetical protein 4114704 6200985 Bind_3629 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834671.1 4114288 D 395963 CDS YP_001834672.1 182680526 6200986 complement(4114868..4115626) 1 NC_010581.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mes:Meso_3918 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4115626 6200986 Bind_3630 Beijerinckia indica subsp. indica ATCC 9039 phospholipid/glycerol acyltransferase YP_001834672.1 4114868 R 395963 CDS YP_001834673.1 182680527 6198633 4116001..4116918 1 NC_010581.1 KEGG: mex:Mext_4417 hypothetical protein; hypothetical protein 4116918 6198633 Bind_3632 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834673.1 4116001 D 395963 CDS YP_001834674.1 182680528 6198634 complement(4116949..4118718) 1 NC_010581.1 KEGG: mex:Mext_1754 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 4118718 6198634 Bind_3633 Beijerinckia indica subsp. indica ATCC 9039 gamma-glutamyltransferase YP_001834674.1 4116949 R 395963 CDS YP_001834675.1 182680529 6200663 complement(4118819..4119607) 1 NC_010581.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 4119607 6200663 Bind_3634 Beijerinckia indica subsp. indica ATCC 9039 UBA/THIF-type NAD/FAD binding protein YP_001834675.1 4118819 R 395963 CDS YP_001834676.1 182680530 6200664 complement(4119774..4121129) 1 NC_010581.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 4121129 glmM 6200664 glmM Beijerinckia indica subsp. indica ATCC 9039 phosphoglucosamine mutase YP_001834676.1 4119774 R 395963 CDS YP_001834677.1 182680531 6200139 4121963..4123150 1 NC_010581.1 TIGRFAM: tol-pal system protein YbgF; KEGG: mex:Mext_4842 tol-pal system protein YbgF; tol-pal system protein YbgF 4123150 6200139 Bind_3636 Beijerinckia indica subsp. indica ATCC 9039 tol-pal system protein YbgF YP_001834677.1 4121963 D 395963 CDS YP_001834678.1 182680532 6200140 4123144..4124346 1 NC_010581.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: bja:bll7147 hypothetical protein; tRNA(Ile)-lysidine synthetase 4124346 6200140 Bind_3637 Beijerinckia indica subsp. indica ATCC 9039 tRNA(Ile)-lysidine synthetase YP_001834678.1 4123144 D 395963 CDS YP_001834679.1 182680533 6200141 4124536..4126458 1 NC_010581.1 KEGG: azc:AZC_0528 FtsH peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 4126458 6200141 Bind_3638 Beijerinckia indica subsp. indica ATCC 9039 ATP-dependent metalloprotease FtsH YP_001834679.1 4124536 D 395963 CDS YP_001834680.1 182680534 6200953 4127456..4129156 1 NC_010581.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: acr:Acry_1741 pyrrolo-quinoline quinone; methanol/ethanol family PQQ-dependent dehydrogenase 4129156 6200953 Bind_3639 Beijerinckia indica subsp. indica ATCC 9039 methanol/ethanol family PQQ-dependent dehydrogenase YP_001834680.1 4127456 D 395963 CDS YP_001834681.1 182680535 6200954 4129175..4130428 1 NC_010581.1 PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6161 cytochrome c, class I; cytochrome c class I 4130428 6200954 Bind_3640 Beijerinckia indica subsp. indica ATCC 9039 cytochrome c class I YP_001834681.1 4129175 D 395963 CDS YP_001834682.1 182680536 6200955 4130606..4131607 1 NC_010581.1 PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_2819 alpha/beta hydrolase fold; lysophospholipase 4131607 6200955 Bind_3641 Beijerinckia indica subsp. indica ATCC 9039 lysophospholipase YP_001834682.1 4130606 D 395963 CDS YP_001834683.1 182680537 6199607 complement(4131637..4132440) 1 NC_010581.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: xau:Xaut_2818 histidinol-phosphate phosphatase, putative; histidinol-phosphate phosphatase 4132440 6199607 Bind_3642 Beijerinckia indica subsp. indica ATCC 9039 histidinol-phosphate phosphatase YP_001834683.1 4131637 R 395963 CDS YP_001834684.1 182680538 6199608 complement(4134211..4135176) 1 NC_010581.1 PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_1390 putative N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 4135176 6199608 Bind_3643 Beijerinckia indica subsp. indica ATCC 9039 N-formylglutamate amidohydrolase YP_001834684.1 4134211 R 395963 CDS YP_001834685.1 182680539 6199905 4135592..4135975 1 NC_010581.1 PFAM: response regulator receiver; KEGG: mex:Mext_3276 response regulator receiver; response regulator receiver protein 4135975 6199905 Bind_3644 Beijerinckia indica subsp. indica ATCC 9039 response regulator receiver protein YP_001834685.1 4135592 D 395963 CDS YP_001834686.1 182680540 6199906 4136065..4137324 1 NC_010581.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pap:PSPA7_4208 probable transglycolase; lytic murein transglycosylase 4137324 6199906 Bind_3645 Beijerinckia indica subsp. indica ATCC 9039 lytic murein transglycosylase YP_001834686.1 4136065 D 395963 CDS YP_001834687.1 182680541 6199907 4137605..4139041 1 NC_010581.1 PFAM: short chain fatty acid transporter; KEGG: reu:Reut_B5759 short chain fatty acid transporter; short chain fatty acid transporter 4139041 6199907 Bind_3646 Beijerinckia indica subsp. indica ATCC 9039 short chain fatty acid transporter YP_001834687.1 4137605 D 395963 CDS YP_001834688.1 182680542 6198994 complement(4139295..4140035) 1 NC_010581.1 KEGG: mex:Mext_0627 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 4140035 6198994 Bind_3647 Beijerinckia indica subsp. indica ATCC 9039 flagellar biosynthetic protein FliP YP_001834688.1 4139295 R 395963 CDS YP_001834689.1 182680543 6198995 complement(4140032..4140535) 1 NC_010581.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rpe:RPE_1163 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 4140535 6198995 Bind_3648 Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body-associated protein FliL YP_001834689.1 4140032 R 395963 CDS YP_001834690.1 182680544 6198996 complement(4140672..4141706) 1 NC_010581.1 PFAM: flagellar L-ring protein; KEGG: rpc:RPC_1101 flagellar basal body L-ring protein; flagellar L-ring protein 4141706 6198996 Bind_3649 Beijerinckia indica subsp. indica ATCC 9039 flagellar L-ring protein YP_001834690.1 4140672 R 395963 CDS YP_001834691.1 182680545 6200826 complement(4141708..4142292) 1 NC_010581.1 KEGG: rpc:RPC_1100 hypothetical protein; hypothetical protein 4142292 6200826 Bind_3650 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834691.1 4141708 R 395963 CDS YP_001834692.1 182680546 6200827 complement(4142373..4143485) 1 NC_010581.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein 4143485 flgI 6200827 flgI Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body P-ring protein YP_001834692.1 4142373 R 395963 CDS YP_001834693.1 182680547 6200828 complement(4143485..4143985) 1 NC_010581.1 KEGG: azc:AZC_0633 flagellar basal-body P-ring formation protein; flagellar basal body P-ring biosynthesis protein-like protein 4143985 6200828 Bind_3652 Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body P-ring biosynthesis protein-like protein YP_001834693.1 4143485 R 395963 CDS YP_001834694.1 182680548 6201603 complement(4143990..4144778) 1 NC_010581.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 4144778 flgG 6201603 flgG Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body rod protein FlgG YP_001834694.1 4143990 R 395963 CDS YP_001834695.1 182680549 6201604 complement(4145001..4145345) 1 NC_010581.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 4145345 6201604 Bind_3654 Beijerinckia indica subsp. indica ATCC 9039 flagellar hook-basal body complex protein FliE YP_001834695.1 4145001 R 395963 CDS YP_001834696.1 182680550 6199365 complement(4145348..4145764) 1 NC_010581.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC 4145764 flgC 6199365 flgC Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body rod protein FlgC YP_001834696.1 4145348 R 395963 CDS YP_001834697.1 182680551 6199366 complement(4145767..4146147) 1 NC_010581.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 4146147 flgB 6199366 flgB Beijerinckia indica subsp. indica ATCC 9039 flagellar basal body rod protein FlgB YP_001834697.1 4145767 R 395963 CDS YP_001834698.1 182680552 6199367 4146398..4147441 1 NC_010581.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nha:Nham_1928 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 4147441 6199367 Bind_3657 Beijerinckia indica subsp. indica ATCC 9039 alcohol dehydrogenase YP_001834698.1 4146398 D 395963 CDS YP_001834699.1 182680553 6201500 complement(4147455..4147862) 1 NC_010581.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rpc:RPC_0523 NUDIX hydrolase; mutator MutT protein 4147862 6201500 Bind_3658 Beijerinckia indica subsp. indica ATCC 9039 mutator MutT protein YP_001834699.1 4147455 R 395963 CDS YP_001834700.1 182680554 6201501 complement(4147859..4149100) 1 NC_010581.1 KEGG: nwi:Nwi_0388 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 4149100 6201501 Bind_3659 Beijerinckia indica subsp. indica ATCC 9039 arginine biosynthesis bifunctional protein ArgJ YP_001834700.1 4147859 R 395963 CDS YP_001834701.1 182680555 6201502 4149895..4151040 1 NC_010581.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: rpc:RPC_0371 esterase, PHB depolymerase; PHB depolymerase family esterase 4151040 6201502 Bind_3660 Beijerinckia indica subsp. indica ATCC 9039 PHB depolymerase family esterase YP_001834701.1 4149895 D 395963 CDS YP_001834702.1 182680556 6198420 4151473..4152984 1 NC_010581.1 KEGG: gdi:GDI0639 hypothetical protein; hypothetical protein 4152984 6198420 Bind_3661 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834702.1 4151473 D 395963 CDS YP_001834703.1 182680557 6198421 complement(4153056..4153685) 1 NC_010581.1 PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_3224 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 4153685 6198421 Bind_3662 Beijerinckia indica subsp. indica ATCC 9039 electron transport protein SCO1/SenC YP_001834703.1 4153056 R 395963 CDS YP_001834704.1 182680558 6198422 4154008..4155099 1 NC_010581.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: azc:AZC_0565 putative CobW protein; cobalamin synthesis protein P47K 4155099 6198422 Bind_3663 Beijerinckia indica subsp. indica ATCC 9039 cobalamin synthesis protein P47K YP_001834704.1 4154008 D 395963 CDS YP_001834705.1 182680559 6198644 4155196..4156245 1 NC_010581.1 PFAM: aldo/keto reductase; KEGG: gox:GOX1598 putative oxidoreductase; aldo/keto reductase 4156245 6198644 Bind_3664 Beijerinckia indica subsp. indica ATCC 9039 aldo/keto reductase YP_001834705.1 4155196 D 395963 CDS YP_001834706.1 182680560 6198645 complement(4156341..4156649) 1 NC_010581.1 KEGG: eba:ebB252 hypothetical protein; hypothetical protein 4156649 6198645 Bind_3665 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834706.1 4156341 R 395963 CDS YP_001834707.1 182680561 6201837 4156884..4157705 1 NC_010581.1 KEGG: xau:Xaut_4140 hypothetical protein; hypothetical protein 4157705 6201837 Bind_3666 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834707.1 4156884 D 395963 CDS YP_001834708.1 182680562 6201838 4158679..4159248 1 NC_010581.1 PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator; GcrA cell cycle regulator 4159248 6201838 Bind_3667 Beijerinckia indica subsp. indica ATCC 9039 GcrA cell cycle regulator YP_001834708.1 4158679 D 395963 CDS YP_001834709.1 182680563 6201839 4160067..4161200 1 NC_010581.1 PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 protein of unknown function DUF140; hypothetical protein 4161200 6201839 Bind_3668 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834709.1 4160067 D 395963 CDS YP_001834710.1 182680564 6198999 4161197..4161997 1 NC_010581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0892 ABC transporter related; ABC transporter-like protein 4161997 6198999 Bind_3669 Beijerinckia indica subsp. indica ATCC 9039 ABC transporter-like protein YP_001834710.1 4161197 D 395963 CDS YP_001834711.1 182680565 6199000 4162172..4163233 1 NC_010581.1 PFAM: Mammalian cell entry related domain protein; KEGG: mex:Mext_0893 mammalian cell entry related domain protein; hypothetical protein 4163233 6199000 Bind_3670 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834711.1 4162172 D 395963 CDS YP_001834712.1 182680566 6199001 4163388..4163984 1 NC_010581.1 PFAM: protein of unknown function DUF330; KEGG: mex:Mext_0894 protein of unknown function DUF330; hypothetical protein 4163984 6199001 Bind_3671 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834712.1 4163388 D 395963 CDS YP_001834713.1 182680567 6199259 complement(4163989..4164978) 1 NC_010581.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_0482 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 4164978 6199259 Bind_3672 Beijerinckia indica subsp. indica ATCC 9039 cation diffusion facilitator family transporter YP_001834713.1 4163989 R 395963 CDS YP_001834714.1 182680568 6199260 complement(4165047..4166153) 1 NC_010581.1 KEGG: mex:Mext_0714 ceramide glucosyltransferase; ceramide glucosyltransferase 4166153 6199260 Bind_3673 Beijerinckia indica subsp. indica ATCC 9039 ceramide glucosyltransferase YP_001834714.1 4165047 R 395963 CDS YP_001834715.1 182680569 6199261 4166561..4167913 1 NC_010581.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 4167913 6199261 Bind_3674 Beijerinckia indica subsp. indica ATCC 9039 glutamyl-tRNA synthetase YP_001834715.1 4166561 D 395963 CDS YP_001834716.1 182680570 6198848 complement(4167876..4169177) 1 NC_010581.1 KEGG: xau:Xaut_4721 hypothetical protein; hypothetical protein 4169177 6198848 Bind_3675 Beijerinckia indica subsp. indica ATCC 9039 hypothetical protein YP_001834716.1 4167876 R 395963 CDS YP_001834717.1 182680571 6198849 4169400..4169942 1 NC_010581.1 PFAM: CreA family protein; KEGG: nwi:Nwi_1583 CreA; CreA family protein 4169942 6198849 Bind_3676 Beijerinckia indica subsp. indica ATCC 9039 CreA family protein YP_001834717.1 4169400 D 395963 CDS