-- dump date 20140618_194455 -- class Genbank::CDS -- table cds_note -- id note YP_008916888.1 COG0593 ATPase involved in DNA replication initiation YP_008916889.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_008916890.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_008916891.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008916892.1 COG0430 RNA 3'-terminal phosphate cyclase YP_008916893.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008916894.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_008916895.1 COG2818 3-methyladenine DNA glycosylase YP_008916897.1 COG3078 Uncharacterized protein conserved in bacteria YP_008916898.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008916899.1 COG2863 Cytochrome c553 YP_008916900.1 COG0218 Predicted GTPase YP_008916901.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_008916902.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_008916903.1 COG0168 Trk-type K+ transport systems, membrane components YP_008916904.1 COG0569 K+ transport systems, NAD-binding component YP_008916905.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008916906.1 COG0223 Methionyl-tRNA formyltransferase YP_008916907.1 COG0242 N-formylmethionyl-tRNA deformylase YP_008916908.1 COG1652 Uncharacterized protein containing LysM domain YP_008916909.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_008916910.1 COG2922 Uncharacterized protein conserved in bacteria YP_008916911.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_008916912.1 COG0009 Putative translation factor (SUA5) YP_008916913.1 COG0408 Coproporphyrinogen III oxidase YP_008916914.1 COG3047 Outer membrane protein W YP_008916915.1 COG2346 Truncated hemoglobins YP_008916916.1 COG0169 Shikimate 5-dehydrogenase YP_008916917.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008916918.1 COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC YP_008916920.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008916921.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008916922.1 COG0587 DNA polymerase III, alpha subunit YP_008916923.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008916924.1 COG1066 Predicted ATP-dependent serine protease YP_008916926.1 COG4805 Uncharacterized protein conserved in bacteria YP_008916927.1 COG4517 Uncharacterized protein conserved in bacteria YP_008916928.1 COG2234 Predicted aminopeptidases YP_008916929.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008916930.1 COG1309 Transcriptional regulator YP_008916931.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_008916932.1 COG2003 DNA repair proteins YP_008916937.1 COG0227 Ribosomal protein L28 YP_008916938.1 COG0267 Ribosomal protein L33 YP_008916940.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_008916941.1 COG0669 Phosphopantetheine adenylyltransferase YP_008916942.1 COG0515 Serine/threonine protein kinase YP_008916943.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008916944.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008916945.1 COG0362 6-phosphogluconate dehydrogenase YP_008916946.1 COG2199 FOG: GGDEF domain YP_008916947.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008916948.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_008916949.1 COG0607 Rhodanese-related sulfurtransferase YP_008916950.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008916951.1 COG1580 Flagellar basal body-associated protein YP_008916952.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_008916953.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_008916954.1 COG4737 Uncharacterized protein conserved in bacteria YP_008916955.1 COG2944 Predicted transcriptional regulator YP_008916956.1 COG2960 Uncharacterized protein conserved in bacteria YP_008916957.1 COG0210 Superfamily I DNA and RNA helicases YP_008916958.1 COG2199 FOG: GGDEF domain YP_008916959.1 COG3245 Cytochrome c5 YP_008916960.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008916961.1 COG1396 Predicted transcriptional regulators YP_008916963.1 COG1757 Na+/H+ antiporter YP_008916964.1 COG2391 Predicted transporter component YP_008916965.1 COG2391 Predicted transporter component YP_008916966.1 COG1959 Predicted transcriptional regulator YP_008916967.1 COG0730 Predicted permeases YP_008916968.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008916969.1 COG3453 Uncharacterized protein conserved in bacteria YP_008916970.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008916973.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008916974.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008916975.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008916976.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008916978.1 COG0607 Rhodanese-related sulfurtransferase YP_008916979.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008916980.1 COG0450 Peroxiredoxin YP_008916982.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008916983.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008916985.1 COG0845 Membrane-fusion protein YP_008916986.1 COG3696 Putative silver efflux pump YP_008916988.1 COG1292 Choline-glycine betaine transporter YP_008916992.1 COG0582 Integrase YP_008916994.1 COG0326 Molecular chaperone, HSP90 family YP_008916996.1 COG0308 Aminopeptidase N YP_008916997.1 COG0500 SAM-dependent methyltransferases YP_008916998.1 COG0845 Membrane-fusion protein YP_008916999.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008917000.1 COG0842 ABC-type multidrug transport system, permease component YP_008917001.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917002.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917004.1 COG1960 Acyl-CoA dehydrogenases YP_008917005.1 COG0583 Transcriptional regulator YP_008917006.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008917007.1 COG3106 Predicted ATPase YP_008917008.1 COG3768 Predicted membrane protein YP_008917009.1 COG2966 Uncharacterized conserved protein YP_008917011.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_008917012.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_008917013.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_008917014.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008917015.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_008917016.1 COG0422 Thiamine biosynthesis protein ThiC YP_008917017.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_008917018.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_008917019.1 COG1587 Uroporphyrinogen-III synthase YP_008917020.1 COG0181 Porphobilinogen deaminase YP_008917021.1 COG2199 FOG: GGDEF domain YP_008917023.1 COG0400 Predicted esterase YP_008917024.1 COG0194 Guanylate kinase YP_008917025.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_008917026.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008917027.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008917028.1 COG0566 rRNA methylases YP_008917029.1 COG1200 RecG-like helicase YP_008917030.1 COG0500 SAM-dependent methyltransferases YP_008917031.1 COG0678 Peroxiredoxin YP_008917032.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008917033.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008917034.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008917035.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008917036.1 COG0668 Small-conductance mechanosensitive channel YP_008917037.1 COG2081 Predicted flavoproteins YP_008917038.1 COG2801 Transposase and inactivated derivatives YP_008917040.1 COG2801 Transposase and inactivated derivatives YP_008917042.1 COG3696 Putative silver efflux pump YP_008917043.1 COG2200 FOG: EAL domain YP_008917044.1 COG0583 Transcriptional regulator YP_008917045.1 COG1279 Lysine efflux permease YP_008917046.1 COG2076 Membrane transporters of cations and cationic drugs YP_008917047.1 COG4446 Uncharacterized protein conserved in bacteria YP_008917048.1 COG2214 DnaJ-class molecular chaperone YP_008917049.1 COG0845 Membrane-fusion protein YP_008917050.1 COG0841 Cation/multidrug efflux pump YP_008917051.1 COG3150 Predicted esterase YP_008917052.1 COG0427 Acetyl-CoA hydrolase YP_008917053.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008917054.1 COG0695 Glutaredoxin and related proteins YP_008917056.1 COG0840 Methyl-accepting chemotaxis protein YP_008917057.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008917059.1 COG0807 GTP cyclohydrolase II YP_008917060.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008917062.1 COG0625 Glutathione S-transferase YP_008917063.1 COG0514 Superfamily II DNA helicase YP_008917064.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008917065.1 COG2962 Predicted permeases YP_008917066.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008917067.1 COG0210 Superfamily I DNA and RNA helicases YP_008917068.1 COG1045 Serine acetyltransferase YP_008917069.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008917070.1 COG4973 Site-specific recombinase XerC YP_008917071.1 COG3159 Uncharacterized protein conserved in bacteria YP_008917072.1 COG0253 Diaminopimelate epimerase YP_008917073.1 COG0019 Diaminopimelate decarboxylase YP_008917075.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_008917076.1 COG0671 Membrane-associated phospholipid phosphatase YP_008917077.1 COG0684 Demethylmenaquinone methyltransferase YP_008917078.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008917079.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008917080.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008917081.1 COG0158 Fructose-1,6-bisphosphatase YP_008917082.1 COG0221 Inorganic pyrophosphatase YP_008917083.1 COG3495 Uncharacterized protein conserved in bacteria YP_008917085.1 COG0824 Predicted thioesterase YP_008917086.1 COG0443 Molecular chaperone YP_008917088.1 COG0178 Excinuclease ATPase subunit YP_008917089.1 COG0477 Permeases of the major facilitator superfamily YP_008917090.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008917092.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008917094.1 COG1609 Transcriptional regulators YP_008917095.1 COG2017 Galactose mutarotase and related enzymes YP_008917096.1 COG1085 Galactose-1-phosphate uridylyltransferase YP_008917097.1 COG0153 Galactokinase YP_008917098.1 COG4146 Predicted symporter YP_008917099.1 COG0629 Single-stranded DNA-binding protein YP_008917101.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008917102.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008917103.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917105.1 COG0554 Glycerol kinase YP_008917106.1 COG1349 Transcriptional regulators of sugar metabolism YP_008917107.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008917114.1 COG1450 Type II secretory pathway, component PulD YP_008917115.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008917116.1 COG0457 FOG: TPR repeat YP_008917117.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008917118.1 COG1459 Type II secretory pathway, component PulF YP_008917123.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008917127.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_008917128.1 COG1792 Cell shape-determining protein YP_008917129.1 COG2891 Cell shape-determining protein YP_008917130.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008917131.1 COG1530 Ribonucleases G and E YP_008917132.1 COG3164 Predicted membrane protein YP_008917133.1 COG0388 Predicted amidohydrolase YP_008917134.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008917135.1 COG3028 Uncharacterized protein conserved in bacteria YP_008917136.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008917137.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008917138.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008917139.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917140.1 COG0642 Signal transduction histidine kinase YP_008917141.1 COG0297 Glycogen synthase YP_008917142.1 COG2813 16S RNA G1207 methylase RsmC YP_008917143.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_008917144.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008917145.1 COG1194 A/G-specific DNA glycosylase YP_008917146.1 COG2924 Fe-S cluster protector protein YP_008917149.1 COG1204 Superfamily II helicase YP_008917150.1 COG3019 Predicted metal-binding protein YP_008917151.1 COG0223 Methionyl-tRNA formyltransferase YP_008917152.1 COG0642 Signal transduction histidine kinase YP_008917153.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917154.1 COG3019 Predicted metal-binding protein YP_008917155.1 COG1538 Outer membrane protein YP_008917156.1 COG0845 Membrane-fusion protein YP_008917157.1 COG3696 Putative silver efflux pump YP_008917160.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_008917161.1 COG1276 Putative copper export protein YP_008917163.1 COG4319 Ketosteroid isomerase homolog YP_008917164.1 COG3503 Predicted membrane protein YP_008917166.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008917168.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008917169.1 COG2857 Cytochrome c1 YP_008917173.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008917177.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_008917179.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_008917180.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_008917182.1 COG0298 Hydrogenase maturation factor YP_008917183.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_008917184.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008917185.1 COG0409 Hydrogenase maturation factor YP_008917186.1 COG0068 Hydrogenase maturation factor YP_008917187.1 COG0309 Hydrogenase maturation factor YP_008917188.1 COG0789 Predicted transcriptional regulators YP_008917189.1 COG2217 Cation transport ATPase YP_008917190.1 COG4633 Uncharacterized protein conserved in bacteria YP_008917192.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_008917196.1 COG2801 Transposase and inactivated derivatives YP_008917202.1 COG1538 Outer membrane protein YP_008917203.1 COG0845 Membrane-fusion protein YP_008917204.1 COG3696 Putative silver efflux pump YP_008917205.1 COG1230 Co/Zn/Cd efflux system component YP_008917207.1 COG0818 Diacylglycerol kinase YP_008917208.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008917209.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008917210.1 COG0398 Uncharacterized conserved protein YP_008917211.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008917212.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917213.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008917216.1 COG3696 Putative silver efflux pump YP_008917217.1 COG0845 Membrane-fusion protein YP_008917218.1 COG1538 Outer membrane protein YP_008917219.1 COG0501 Zn-dependent protease with chaperone function YP_008917220.1 COG3682 Predicted transcriptional regulator YP_008917221.1 COG0582 Integrase YP_008917223.1 COG2963 Transposase and inactivated derivatives YP_008917224.1 COG2801 Transposase and inactivated derivatives YP_008917225.1 COG0789 Predicted transcriptional regulators YP_008917226.1 COG2217 Cation transport ATPase YP_008917227.1 COG4633 Uncharacterized protein conserved in bacteria YP_008917229.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_008917231.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008917234.1 COG0531 Amino acid transporters YP_008917235.1 COG3667 Uncharacterized protein involved in copper resistance YP_008917236.1 COG2132 Putative multicopper oxidases YP_008917239.1 COG0840 Methyl-accepting chemotaxis protein YP_008917240.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008917241.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008917242.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008917244.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008917245.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917246.1 COG1609 Transcriptional regulators YP_008917247.1 COG0738 Fucose permease YP_008917248.1 COG1626 Neutral trehalase YP_008917249.1 COG2199 FOG: GGDEF domain YP_008917250.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008917251.1 COG0546 Predicted phosphatases YP_008917253.1 COG0642 Signal transduction histidine kinase YP_008917255.1 COG1082 Sugar phosphate isomerases/epimerases YP_008917256.1 COG1609 Transcriptional regulators YP_008917257.1 COG0673 Predicted dehydrogenases and related proteins YP_008917258.1 COG1082 Sugar phosphate isomerases/epimerases YP_008917259.1 COG0477 Permeases of the major facilitator superfamily YP_008917260.1 COG3622 Hydroxypyruvate isomerase YP_008917261.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008917262.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008917264.1 COG1454 Alcohol dehydrogenase, class IV YP_008917265.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008917266.1 COG0588 Phosphoglycerate mutase 1 YP_008917267.1 COG3542 Uncharacterized conserved protein YP_008917268.1 COG1048 Aconitase A YP_008917269.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008917270.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008917271.1 COG0051 Ribosomal protein S10 YP_008917272.1 COG0087 Ribosomal protein L3 YP_008917273.1 COG0088 Ribosomal protein L4 YP_008917274.1 COG0089 Ribosomal protein L23 YP_008917275.1 COG0090 Ribosomal protein L2 YP_008917276.1 COG0185 Ribosomal protein S19 YP_008917277.1 COG0091 Ribosomal protein L22 YP_008917278.1 COG0092 Ribosomal protein S3 YP_008917279.1 COG0197 Ribosomal protein L16/L10E YP_008917280.1 COG0255 Ribosomal protein L29 YP_008917281.1 COG0186 Ribosomal protein S17 YP_008917282.1 COG0438 Glycosyltransferase YP_008917283.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008917284.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_008917285.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008917288.1 COG0840 Methyl-accepting chemotaxis protein YP_008917289.1 COG0339 Zn-dependent oligopeptidases YP_008917291.1 COG0788 Formyltetrahydrofolate hydrolase YP_008917292.1 COG1514 2'-5' RNA ligase YP_008917293.1 COG1643 HrpA-like helicases YP_008917294.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008917295.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008917298.1 COG2354 Uncharacterized protein conserved in bacteria YP_008917299.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008917301.1 COG0347 Nitrogen regulatory protein PII YP_008917302.1 COG0004 Ammonia permease YP_008917303.1 COG0405 Gamma-glutamyltransferase YP_008917304.1 COG2837 Predicted iron-dependent peroxidase YP_008917305.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008917306.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_008917307.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_008917308.1 COG1309 Transcriptional regulator YP_008917309.1 COG0845 Membrane-fusion protein YP_008917310.1 COG0841 Cation/multidrug efflux pump YP_008917312.1 COG0642 Signal transduction histidine kinase YP_008917313.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008917315.1 COG2199 FOG: GGDEF domain YP_008917317.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008917318.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_008917319.1 COG4992 Ornithine/acetylornithine aminotransferase YP_008917321.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008917322.1 COG0180 Tryptophanyl-tRNA synthetase YP_008917323.1 COG0036 Pentose-5-phosphate-3-epimerase YP_008917327.1 COG0338 Site-specific DNA methylase YP_008917328.1 COG3266 Uncharacterized protein conserved in bacteria YP_008917329.1 COG0337 3-dehydroquinate synthetase YP_008917330.1 COG0703 Shikimate kinase YP_008917331.1 COG4796 Type II secretory pathway, component HofQ YP_008917332.1 COG3168 Tfp pilus assembly protein PilP YP_008917333.1 COG3167 Tfp pilus assembly protein PilO YP_008917334.1 COG3166 Tfp pilus assembly protein PilN YP_008917335.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_008917336.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_008917337.1 COG0281 Malic enzyme YP_008917339.1 COG0625 Glutathione S-transferase YP_008917341.1 COG0753 Catalase YP_008917342.1 COG1309 Transcriptional regulator YP_008917343.1 COG4757 Predicted alpha/beta hydrolase YP_008917344.1 COG0548 Acetylglutamate kinase YP_008917345.1 COG0165 Argininosuccinate lyase YP_008917346.1 COG0137 Argininosuccinate synthase YP_008917347.1 COG0078 Ornithine carbamoyltransferase YP_008917348.1 COG0548 Acetylglutamate kinase YP_008917349.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_008917350.1 COG1803 Methylglyoxal synthase YP_008917351.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_008917352.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917353.1 COG0642 Signal transduction histidine kinase YP_008917354.1 COG2267 Lysophospholipase YP_008917355.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008917357.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_008917358.1 COG1952 Preprotein translocase subunit SecB YP_008917359.1 COG0695 Glutaredoxin and related proteins YP_008917360.1 COG0607 Rhodanese-related sulfurtransferase YP_008917361.1 COG4942 Membrane-bound metallopeptidase YP_008917362.1 COG2861 Uncharacterized protein conserved in bacteria YP_008917364.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008917365.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008917366.1 COG0688 Phosphatidylserine decarboxylase YP_008917367.1 COG1162 Predicted GTPases YP_008917368.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_008917369.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917373.1 COG0326 Molecular chaperone, HSP90 family YP_008917374.1 COG0270 Site-specific DNA methylase YP_008917375.1 COG3085 Uncharacterized protein conserved in bacteria YP_008917376.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008917377.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_008917379.1 COG1826 Sec-independent protein secretion pathway components YP_008917380.1 COG1826 Sec-independent protein secretion pathway components YP_008917381.1 COG0805 Sec-independent protein secretion pathway component TatC YP_008917383.1 COG0084 Mg-dependent DNase YP_008917384.1 COG2199 FOG: GGDEF domain YP_008917385.1 COG0113 Delta-aminolevulinic acid dehydratase YP_008917386.1 COG0248 Exopolyphosphatase YP_008917387.1 COG0513 Superfamily II DNA and RNA helicases YP_008917388.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008917389.1 COG1158 Transcription termination factor YP_008917390.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_008917391.1 COG0642 Signal transduction histidine kinase YP_008917392.1 COG3004 Na+/H+ antiporter YP_008917393.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_008917394.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_008917395.1 COG2847 Uncharacterized protein conserved in bacteria YP_008917396.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008917397.1 COG2133 Glucose/sorbosone dehydrogenases YP_008917398.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008917399.1 COG4323 Predicted membrane protein YP_008917400.1 COG3118 Thioredoxin domain-containing protein YP_008917402.1 COG0520 Selenocysteine lyase YP_008917403.1 COG3242 Uncharacterized protein conserved in bacteria YP_008917404.1 COG0104 Adenylosuccinate synthase YP_008917405.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008917406.1 COG3565 Predicted dioxygenase of extradiol dioxygenase family YP_008917407.1 COG1432 Uncharacterized conserved protein YP_008917408.1 COG0405 Gamma-glutamyltransferase YP_008917409.1 COG1757 Na+/H+ antiporter YP_008917410.1 COG1472 Beta-glucosidase-related glycosidases YP_008917411.1 COG0668 Small-conductance mechanosensitive channel YP_008917412.1 COG3876 Uncharacterized protein conserved in bacteria YP_008917413.1 COG2103 Predicted sugar phosphate isomerase YP_008917414.1 COG0787 Alanine racemase YP_008917415.1 COG1284 Uncharacterized conserved protein YP_008917417.1 COG0346 Lactoylglutathione lyase and related lyases YP_008917419.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008917420.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008917422.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_008917423.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008917424.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008917425.1 COG1569 Predicted nucleic acid-binding protein, contains PIN domain YP_008917428.1 COG3093 Plasmid maintenance system antidote protein YP_008917429.1 COG3549 Plasmid maintenance system killer protein YP_008917430.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008917431.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008917434.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008917436.1 COG3547 Transposase and inactivated derivatives YP_008917437.1 COG3514 Uncharacterized protein conserved in bacteria YP_008917438.1 COG2929 Uncharacterized protein conserved in bacteria YP_008917440.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008917441.1 COG3668 Plasmid stabilization system protein YP_008917442.1 COG0582 Integrase YP_008917443.1 COG0183 Acetyl-CoA acetyltransferase YP_008917444.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008917445.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008917446.1 COG0006 Xaa-Pro aminopeptidase YP_008917447.1 COG0428 Predicted divalent heavy-metal cations transporter YP_008917448.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008917449.1 COG0261 Ribosomal protein L21 YP_008917450.1 COG0211 Ribosomal protein L27 YP_008917451.1 COG0536 Predicted GTPase YP_008917452.1 COG0262 Dihydrofolate reductase YP_008917453.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008917454.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008917455.1 COG1238 Predicted membrane protein YP_008917456.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_008917457.1 COG0585 Uncharacterized conserved protein YP_008917458.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008917459.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_008917460.1 COG2919 Septum formation initiator YP_008917462.1 COG0840 Methyl-accepting chemotaxis protein YP_008917464.1 COG0506 Proline dehydrogenase YP_008917465.1 COG0642 Signal transduction histidine kinase YP_008917466.1 COG3103 SH3 domain protein YP_008917467.1 COG3025 Uncharacterized conserved protein YP_008917468.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008917469.1 COG3066 DNA mismatch repair protein YP_008917470.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008917471.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_008917472.1 COG0730 Predicted permeases YP_008917473.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008917474.1 COG0207 Thymidylate synthase YP_008917475.1 COG0784 FOG: CheY-like receiver YP_008917476.1 COG2199 FOG: GGDEF domain YP_008917477.1 COG0477 Permeases of the major facilitator superfamily YP_008917480.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008917481.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008917483.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008917484.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_008917486.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008917487.1 COG0513 Superfamily II DNA and RNA helicases YP_008917488.1 COG0457 FOG: TPR repeat YP_008917489.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008917491.1 COG1538 Outer membrane protein YP_008917492.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008917493.1 COG3151 Uncharacterized protein conserved in bacteria YP_008917494.1 COG1409 Predicted phosphohydrolases YP_008917495.1 COG3150 Predicted esterase YP_008917496.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008917498.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008917499.1 COG5544 Predicted periplasmic lipoprotein YP_008917503.1 COG1509 Lysine 2,3-aminomutase YP_008917504.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008917505.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_008917506.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917508.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008917509.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917510.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008917511.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008917512.1 COG2813 16S RNA G1207 methylase RsmC YP_008917513.1 COG3145 Alkylated DNA repair protein YP_008917514.1 COG0271 Stress-induced morphogen (activity unknown) YP_008917515.1 COG0671 Membrane-associated phospholipid phosphatase YP_008917516.1 COG3575 Uncharacterized protein conserved in bacteria YP_008917517.1 COG3707 Response regulator with putative antiterminator output domain YP_008917520.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008917521.1 COG1251 NAD(P)H-nitrite reductase YP_008917522.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_008917523.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008917524.1 COG0007 Uroporphyrinogen-III methylase YP_008917525.1 COG0547 Anthranilate phosphoribosyltransferase YP_008917526.1 COG2202 FOG: PAS/PAC domain YP_008917527.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008917528.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_008917529.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_008917531.1 COG1896 Predicted hydrolases of HD superfamily YP_008917532.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008917533.1 COG4206 Outer membrane cobalamin receptor protein YP_008917534.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_008917535.1 COG0348 Polyferredoxin YP_008917537.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008917538.1 COG1960 Acyl-CoA dehydrogenases YP_008917539.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008917540.1 COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_008917541.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_008917542.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008917543.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008917544.1 COG0841 Cation/multidrug efflux pump YP_008917547.1 COG0840 Methyl-accepting chemotaxis protein YP_008917548.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008917549.1 COG0358 DNA primase (bacterial type) YP_008917550.1 COG1610 Uncharacterized conserved protein YP_008917551.1 COG0828 Ribosomal protein S21 YP_008917552.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_008917553.1 COG1524 Uncharacterized proteins of the AP superfamily YP_008917554.1 COG0344 Predicted membrane protein YP_008917555.1 COG1539 Dihydroneopterin aldolase YP_008917556.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008917557.1 COG1968 Uncharacterized bacitracin resistance protein YP_008917558.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008917560.1 COG1639 Predicted signal transduction protein YP_008917561.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_008917562.1 COG1396 Predicted transcriptional regulators YP_008917563.1 COG2974 DNA recombination-dependent growth factor C YP_008917564.1 COG0642 Signal transduction histidine kinase YP_008917565.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917566.1 COG0642 Signal transduction histidine kinase YP_008917567.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008917569.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917571.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_008917572.1 COG0811 Biopolymer transport proteins YP_008917573.1 COG0848 Biopolymer transport protein YP_008917574.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008917575.1 COG0457 FOG: TPR repeat YP_008917576.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008917577.1 COG0642 Signal transduction histidine kinase YP_008917578.1 COG1049 Aconitase B YP_008917579.1 COG1430 Uncharacterized conserved protein YP_008917580.1 COG0527 Aspartokinases YP_008917581.1 COG0840 Methyl-accepting chemotaxis protein YP_008917582.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_008917583.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_008917584.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_008917585.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_008917586.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008917587.1 COG1452 Organic solvent tolerance protein OstA YP_008917588.1 COG1076 DnaJ-domain-containing proteins 1 YP_008917589.1 COG4974 Site-specific recombinase XerD YP_008917590.1 COG1651 Protein-disulfide isomerase YP_008917591.1 COG0608 Single-stranded DNA-specific exonuclease YP_008917593.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_008917594.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_008917595.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_008917596.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008917597.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008917598.1 COG1694 Predicted pyrophosphatase YP_008917599.1 COG2832 Uncharacterized protein conserved in bacteria YP_008917600.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008917601.1 COG0457 FOG: TPR repeat YP_008917602.1 COG0457 FOG: TPR repeat YP_008917603.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008917605.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008917607.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008917608.1 COG0398 Uncharacterized conserved protein YP_008917609.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008917611.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008917613.1 COG0642 Signal transduction histidine kinase YP_008917614.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008917615.1 COG0102 Ribosomal protein L13 YP_008917616.1 COG0103 Ribosomal protein S9 YP_008917617.1 COG0723 Rieske Fe-S protein YP_008917618.1 COG1290 Cytochrome b subunit of the bc complex YP_008917619.1 COG2857 Cytochrome c1 YP_008917620.1 COG0625 Glutathione S-transferase YP_008917621.1 COG2969 Stringent starvation protein B YP_008917622.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008917623.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008917624.1 COG1660 Predicted P-loop-containing kinase YP_008917625.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008917626.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_008917627.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_008917628.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008917629.1 COG1934 Uncharacterized protein conserved in bacteria YP_008917630.1 COG3117 Uncharacterized protein conserved in bacteria YP_008917631.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_008917632.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_008917633.1 COG0530 Ca2+/Na+ antiporter YP_008917634.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_008917635.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_008917636.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_008917637.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_008917638.1 COG3113 Predicted NTP binding protein (contains STAS domain) YP_008917639.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_008917640.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008917641.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008917642.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008917644.1 COG1485 Predicted ATPase YP_008917645.1 COG0217 Uncharacterized conserved protein YP_008917646.1 COG2346 Truncated hemoglobins YP_008917648.1 COG2199 FOG: GGDEF domain YP_008917649.1 COG0778 Nitroreductase YP_008917651.1 COG0342 Preprotein translocase subunit SecD YP_008917652.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_008917653.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917654.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008917656.1 COG2202 FOG: PAS/PAC domain YP_008917657.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008917660.1 COG0192 S-adenosylmethionine synthetase YP_008917661.1 COG0021 Transketolase YP_008917662.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008917663.1 COG0126 3-phosphoglycerate kinase YP_008917664.1 COG3588 Fructose-1,6-bisphosphate aldolase YP_008917666.1 COG0845 Membrane-fusion protein YP_008917667.1 COG0841 Cation/multidrug efflux pump YP_008917668.1 COG1538 Outer membrane protein YP_008917669.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008917670.1 COG0248 Exopolyphosphatase YP_008917671.1 COG0855 Polyphosphate kinase YP_008917672.1 COG2716 Glycine cleavage system regulatory protein YP_008917673.1 COG4590 ABC-type uncharacterized transport system, permease component YP_008917674.1 COG0581 ABC-type phosphate transport system, permease component YP_008917675.1 COG1117 ABC-type phosphate transport system, ATPase component YP_008917676.1 COG0704 Phosphate uptake regulator YP_008917677.1 COG0306 Phosphate/sulphate permeases YP_008917678.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008917679.1 COG0583 Transcriptional regulator YP_008917681.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_008917682.1 COG1846 Transcriptional regulators YP_008917683.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008917684.1 COG0308 Aminopeptidase N YP_008917685.1 COG3747 Phage terminase, small subunit YP_008917686.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008917687.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008917692.1 COG4653 Predicted phage phi-C31 gp36 major capsid-like protein YP_008917694.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008917695.1 COG0308 Aminopeptidase N YP_008917696.1 COG1225 Peroxiredoxin YP_008917697.1 COG1739 Uncharacterized conserved protein YP_008917699.1 COG0420 DNA repair exonuclease YP_008917700.1 COG0419 ATPase involved in DNA repair YP_008917701.1 COG3633 Na+/serine symporter YP_008917702.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_008917703.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008917704.1 COG2188 Transcriptional regulators YP_008917705.1 COG2987 Urocanate hydratase YP_008917706.1 COG2986 Histidine ammonia-lyase YP_008917707.1 COG3045 Uncharacterized protein conserved in bacteria YP_008917709.1 COG3713 Outer membrane protein V YP_008917712.1 COG0668 Small-conductance mechanosensitive channel YP_008917714.1 COG0477 Permeases of the major facilitator superfamily YP_008917718.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008917720.1 COG3279 Response regulator of the LytR/AlgR family YP_008917722.1 COG1346 Putative effector of murein hydrolase YP_008917723.1 COG0784 FOG: CheY-like receiver YP_008917724.1 COG2202 FOG: PAS/PAC domain YP_008917728.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008917729.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_008917730.1 COG0513 Superfamily II DNA and RNA helicases YP_008917732.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008917733.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008917735.1 COG0066 3-isopropylmalate dehydratase small subunit YP_008917736.1 COG0065 3-isopropylmalate dehydratase large subunit YP_008917737.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008917738.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008917740.1 COG0148 Enolase YP_008917741.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_008917742.1 COG0249 Mismatch repair ATPase (MutS family) YP_008917743.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_008917744.1 COG0468 RecA/RadA recombinase YP_008917745.1 COG4555 ABC-type Na+ transport system, ATPase component YP_008917746.1 COG1668 ABC-type Na+ efflux pump, permease component YP_008917747.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_008917750.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_008917751.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008917752.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008917753.1 COG3114 Heme exporter protein D YP_008917754.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_008917755.1 COG1138 Cytochrome c biogenesis factor YP_008917756.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008917757.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_008917758.1 COG4235 Cytochrome c biogenesis factor YP_008917759.1 COG2853 Surface lipoprotein YP_008917760.1 COG1087 UDP-glucose 4-epimerase YP_008917762.1 COG3104 Dipeptide/tripeptide permease YP_008917763.1 COG3524 Capsule polysaccharide export protein YP_008917764.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_008917765.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_008917766.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008917768.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008917769.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008917770.1 COG1216 Predicted glycosyltransferases YP_008917771.1 COG1210 UDP-glucose pyrophosphorylase YP_008917772.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_008917773.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008917775.1 COG2913 Small protein A (tmRNA-binding) YP_008917776.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_008917777.1 COG2199 FOG: GGDEF domain YP_008917778.1 COG2904 Uncharacterized protein conserved in bacteria YP_008917782.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008917785.1 COG3098 Uncharacterized protein conserved in bacteria YP_008917786.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008917787.1 COG0716 Flavodoxins YP_008917788.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_008917789.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_008917790.1 COG0024 Methionine aminopeptidase YP_008917791.1 COG0052 Ribosomal protein S2 YP_008917792.1 COG0264 Translation elongation factor Ts YP_008917793.1 COG0528 Uridylate kinase YP_008917794.1 COG0233 Ribosome recycling factor YP_008917795.1 COG0020 Undecaprenyl pyrophosphate synthase YP_008917796.1 COG0575 CDP-diglyceride synthetase YP_008917797.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008917798.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_008917799.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_008917800.1 COG2825 Outer membrane protein YP_008917801.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008917802.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_008917803.1 COG0763 Lipid A disaccharide synthetase YP_008917804.1 COG0164 Ribonuclease HII YP_008917805.1 COG0587 DNA polymerase III, alpha subunit YP_008917806.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_008917807.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008917808.1 COG2199 FOG: GGDEF domain YP_008917809.1 COG0475 Kef-type K+ transport systems, membrane components YP_008917811.1 COG0590 Cytosine/adenosine deaminases YP_008917813.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008917814.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_008917816.1 COG2840 Uncharacterized protein conserved in bacteria YP_008917818.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008917819.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008917820.1 COG0845 Membrane-fusion protein YP_008917821.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008917822.1 COG2200 FOG: EAL domain YP_008917825.1 COG3018 Uncharacterized protein conserved in bacteria YP_008917827.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_008917828.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_008917829.1 COG0835 Chemotaxis signal transduction protein YP_008917830.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008917831.1 COG1815 Flagellar basal body protein YP_008917832.1 COG1558 Flagellar basal body rod protein YP_008917833.1 COG1843 Flagellar hook capping protein YP_008917834.1 COG1749 Flagellar hook protein FlgE YP_008917835.1 COG4787 Flagellar basal body rod protein YP_008917836.1 COG4786 Flagellar basal body rod protein YP_008917837.1 COG2063 Flagellar basal body L-ring protein YP_008917838.1 COG1706 Flagellar basal-body P-ring protein YP_008917839.1 COG3951 Rod binding protein YP_008917840.1 COG1256 Flagellar hook-associated protein YP_008917841.1 COG1344 Flagellin and related hook-associated proteins YP_008917843.1 COG1344 Flagellin and related hook-associated proteins YP_008917844.1 COG1344 Flagellin and related hook-associated proteins YP_008917845.1 COG1344 Flagellin and related hook-associated proteins YP_008917846.1 COG1334 Uncharacterized flagellar protein FlaG YP_008917847.1 COG1345 Flagellar capping protein YP_008917848.1 COG1516 Flagellin-specific chaperone FliS YP_008917850.1 COG2604 Uncharacterized protein conserved in bacteria YP_008917851.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008917852.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008917853.1 COG3365 Uncharacterized protein conserved in archaea YP_008917854.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008917855.1 COG2089 Sialic acid synthase YP_008917856.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_008917857.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_008917858.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008917859.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_008917860.1 COG0615 Cytidylyltransferase YP_008917861.1 COG1344 Flagellin and related hook-associated proteins YP_008917862.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008917863.1 COG0642 Signal transduction histidine kinase YP_008917864.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008917865.1 COG1677 Flagellar hook-basal body protein YP_008917866.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_008917867.1 COG1536 Flagellar motor switch protein YP_008917868.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_008917869.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_008917870.1 COG2882 Flagellar biosynthesis chaperone YP_008917871.1 COG3144 Flagellar hook-length control protein YP_008917872.1 COG1580 Flagellar basal body-associated protein YP_008917873.1 COG1868 Flagellar motor switch protein YP_008917874.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_008917875.1 COG3190 Flagellar biogenesis protein YP_008917876.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_008917877.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_008917878.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_008917879.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_008917880.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_008917881.1 COG1419 Flagellar GTP-binding protein YP_008917882.1 COG0455 ATPases involved in chromosome partitioning YP_008917883.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_008917884.1 COG0784 FOG: CheY-like receiver YP_008917885.1 COG3143 Chemotaxis protein YP_008917886.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008917887.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008917888.1 COG1192 ATPases involved in chromosome partitioning YP_008917889.1 COG0835 Chemotaxis signal transduction protein YP_008917890.1 COG0835 Chemotaxis signal transduction protein YP_008917892.1 COG1897 Homoserine trans-succinylase YP_008917893.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_008917894.1 COG1410 Methionine synthase I, cobalamin-binding domain YP_008917896.1 COG3123 Uncharacterized protein conserved in bacteria YP_008917897.1 COG0840 Methyl-accepting chemotaxis protein YP_008917898.1 COG0583 Transcriptional regulator YP_008917899.1 COG0583 Transcriptional regulator YP_008917900.1 COG0288 Carbonic anhydrase YP_008917901.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008917902.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917903.1 COG1309 Transcriptional regulator YP_008917904.1 COG3590 Predicted metalloendopeptidase YP_008917905.1 COG3146 Uncharacterized protein conserved in bacteria YP_008917906.1 COG2137 Uncharacterized protein conserved in bacteria YP_008917907.1 COG0013 Alanyl-tRNA synthetase YP_008917908.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008917910.1 COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit YP_008917911.1 COG5016 Pyruvate/oxaloacetate carboxyltransferase YP_008917912.1 COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit YP_008917913.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component YP_008917914.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component YP_008917915.1 COG4171 ABC-type antimicrobial peptide transport system, permease component YP_008917916.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008917917.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008917918.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_008917919.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_008917920.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008917921.1 COG0625 Glutathione S-transferase YP_008917922.1 COG1522 Transcriptional regulators YP_008917923.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008917926.1 COG3483 Tryptophan 2,3-dioxygenase (vermilion) YP_008917927.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917928.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917931.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_008917932.1 COG0457 FOG: TPR repeat YP_008917933.1 COG3751 Predicted proline hydroxylase YP_008917935.1 COG0811 Biopolymer transport proteins YP_008917936.1 COG0811 Biopolymer transport proteins YP_008917937.1 COG0848 Biopolymer transport protein YP_008917938.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008917939.1 COG0457 FOG: TPR repeat YP_008917940.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase YP_008917941.1 COG1607 Acyl-CoA hydrolase YP_008917942.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008917944.1 COG3201 Nicotinamide mononucleotide transporter YP_008917945.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_008917946.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008917947.1 COG0583 Transcriptional regulator YP_008917948.1 COG2814 Arabinose efflux permease YP_008917949.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008917950.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008917951.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008917953.1 COG1566 Multidrug resistance efflux pump YP_008917954.1 COG1846 Transcriptional regulators YP_008917955.1 COG3311 Predicted transcriptional regulator YP_008917956.1 COG0582 Integrase YP_008917959.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008917960.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008917961.1 COG4644 Transposase and inactivated derivatives, TnpA family YP_008917964.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008917965.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008917967.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008917969.1 COG2378 Predicted transcriptional regulator YP_008917970.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008917971.1 COG0732 Restriction endonuclease S subunits YP_008917973.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008917974.1 COG1401 GTPase subunit of restriction endonuclease YP_008917975.1 COG4268 McrBC 5-methylcytosine restriction system component YP_008917976.1 COG1715 Restriction endonuclease YP_008917980.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_008917983.1 COG4584 Transposase and inactivated derivatives YP_008917984.1 COG5659 FOG: Transposase YP_008917985.1 COG1484 DNA replication protein YP_008917994.1 COG1651 Protein-disulfide isomerase YP_008917995.1 COG3451 Type IV secretory pathway, VirB4 components YP_008917997.1 COG0681 Signal peptidase I YP_008918002.1 COG1573 Uracil-DNA glycosylase YP_008918003.1 COG0366 Glycosidases YP_008918005.1 COG0629 Single-stranded DNA-binding protein YP_008918008.1 COG5377 Phage-related protein, predicted endonuclease YP_008918009.1 COG0714 MoxR-like ATPases YP_008918013.1 COG4548 Nitric oxide reductase activation protein YP_008918014.1 COG2003 DNA repair proteins YP_008918016.1 COG0593 ATPase involved in DNA replication initiation YP_008918018.1 COG0419 ATPase involved in DNA repair YP_008918021.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008918024.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_008918027.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008918030.1 COG4197 Uncharacterized protein conserved in bacteria, prophage-related YP_008918031.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008918032.1 COG4108 Peptide chain release factor RF-3 YP_008918033.1 COG0018 Arginyl-tRNA synthetase YP_008918034.1 COG0431 Predicted flavoprotein YP_008918037.1 COG0031 Cysteine synthase YP_008918039.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008918042.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_008918045.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008918048.1 COG4197 Uncharacterized protein conserved in bacteria, prophage-related YP_008918049.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008918050.1 COG4108 Peptide chain release factor RF-3 YP_008918051.1 COG0018 Arginyl-tRNA synthetase YP_008918052.1 COG0431 Predicted flavoprotein YP_008918055.1 COG0031 Cysteine synthase YP_008918056.1 COG0464 ATPases of the AAA+ class YP_008918057.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008918058.1 COG3059 Predicted membrane protein YP_008918060.1 COG4852 Predicted membrane protein YP_008918061.1 COG3239 Fatty acid desaturase YP_008918063.1 COG1186 Protein chain release factor B YP_008918064.1 COG1190 Lysyl-tRNA synthetase (class II) YP_008918065.1 COG1893 Ketopantoate reductase YP_008918066.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008918067.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008918068.1 COG0612 Predicted Zn-dependent peptidases YP_008918069.1 COG2918 Gamma-glutamylcysteine synthetase YP_008918070.1 COG4764 Uncharacterized protein conserved in bacteria YP_008918072.1 COG0753 Catalase YP_008918074.1 COG2840 Uncharacterized protein conserved in bacteria YP_008918075.1 COG2890 Methylase of polypeptide chain release factors YP_008918076.1 COG0082 Chorismate synthase YP_008918077.1 COG0477 Permeases of the major facilitator superfamily YP_008918078.1 COG2719 Uncharacterized conserved protein YP_008918079.1 COG2718 Uncharacterized conserved protein YP_008918080.1 COG2766 Putative Ser protein kinase YP_008918081.1 COG0605 Superoxide dismutase YP_008918082.1 COG0278 Glutaredoxin-related protein YP_008918083.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918084.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008918085.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008918086.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918087.1 COG2906 Bacterioferritin-associated ferredoxin YP_008918088.1 COG0450 Peroxiredoxin YP_008918089.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008918090.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008918091.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008918092.1 COG0346 Lactoylglutathione lyase and related lyases YP_008918093.1 COG1278 Cold shock proteins YP_008918095.1 COG2234 Predicted aminopeptidases YP_008918097.1 COG0177 Predicted EndoIII-related endonuclease YP_008918098.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_008918099.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_008918100.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_008918101.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_008918102.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_008918103.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_008918104.1 COG0534 Na+-driven multidrug efflux pump YP_008918105.1 COG0556 Helicase subunit of the DNA excision repair complex YP_008918106.1 COG0583 Transcriptional regulator YP_008918107.1 COG0603 Predicted PP-loop superfamily ATPase YP_008918108.1 COG0602 Organic radical activating enzymes YP_008918110.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008918111.1 COG1723 Uncharacterized conserved protein YP_008918112.1 COG2234 Predicted aminopeptidases YP_008918115.1 COG0471 Di- and tricarboxylate transporters YP_008918116.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_008918117.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008918118.1 COG0529 Adenylylsulfate kinase and related kinases YP_008918119.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008918120.1 COG0591 Na+/proline symporter YP_008918121.1 COG2199 FOG: GGDEF domain YP_008918123.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008918124.1 COG4805 Uncharacterized protein conserved in bacteria YP_008918126.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008918127.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008918129.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008918130.1 COG0714 MoxR-like ATPases YP_008918131.1 COG0183 Acetyl-CoA acetyltransferase YP_008918132.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008918135.1 COG2202 FOG: PAS/PAC domain YP_008918136.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008918137.1 COG2062 Phosphohistidine phosphatase SixA YP_008918139.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_008918140.1 COG4137 ABC-type uncharacterized transport system, permease component YP_008918141.1 COG0541 Signal recognition particle GTPase YP_008918143.1 COG1196 Chromosome segregation ATPases YP_008918145.1 COG0515 Serine/threonine protein kinase YP_008918147.1 COG2267 Lysophospholipase YP_008918148.1 COG0841 Cation/multidrug efflux pump YP_008918149.1 COG0845 Membrane-fusion protein YP_008918150.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008918153.1 COG0228 Ribosomal protein S16 YP_008918154.1 COG0806 RimM protein, required for 16S rRNA processing YP_008918155.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_008918156.1 COG0335 Ribosomal protein L19 YP_008918157.1 COG2860 Predicted membrane protein YP_008918158.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008918159.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008918160.1 COG1605 Chorismate mutase YP_008918161.1 COG1605 Chorismate mutase YP_008918162.1 COG0784 FOG: CheY-like receiver YP_008918163.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_008918164.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_008918165.1 COG0784 FOG: CheY-like receiver YP_008918166.1 COG4103 Uncharacterized protein conserved in bacteria YP_008918167.1 COG2199 FOG: GGDEF domain YP_008918169.1 COG0642 Signal transduction histidine kinase YP_008918170.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008918171.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008918172.1 COG1344 Flagellin and related hook-associated proteins YP_008918173.1 COG2203 FOG: GAF domain YP_008918174.1 COG1801 Uncharacterized conserved protein YP_008918175.1 COG0173 Aspartyl-tRNA synthetase YP_008918176.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008918177.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_008918178.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_008918179.1 COG2255 Holliday junction resolvasome, helicase subunit YP_008918180.1 COG0824 Predicted thioesterase YP_008918181.1 COG0811 Biopolymer transport proteins YP_008918182.1 COG0848 Biopolymer transport protein YP_008918183.1 COG3064 Membrane protein involved in colicin uptake YP_008918184.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008918185.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008918186.1 COG1729 Uncharacterized protein conserved in bacteria YP_008918187.1 COG0379 Quinolinate synthase YP_008918189.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008918190.1 COG1893 Ketopantoate reductase YP_008918192.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008918193.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008918194.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918195.1 COG3038 Cytochrome B561 YP_008918196.1 COG2199 FOG: GGDEF domain YP_008918199.1 COG0583 Transcriptional regulator YP_008918200.1 COG1451 Predicted metal-dependent hydrolase YP_008918201.1 COG0517 FOG: CBS domain YP_008918202.1 COG0841 Cation/multidrug efflux pump YP_008918203.1 COG0845 Membrane-fusion protein YP_008918204.1 COG2199 FOG: GGDEF domain YP_008918205.1 COG3009 Uncharacterized protein conserved in bacteria YP_008918206.1 COG3008 Paraquat-inducible protein B YP_008918207.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008918209.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918210.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_008918212.1 COG0530 Ca2+/Na+ antiporter YP_008918213.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008918214.1 COG0456 Acetyltransferases YP_008918217.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008918218.1 COG0502 Biotin synthase and related enzymes YP_008918219.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008918220.1 COG0500 SAM-dependent methyltransferases YP_008918221.1 COG0132 Dethiobiotin synthetase YP_008918222.1 COG3340 Peptidase E YP_008918223.1 COG0394 Protein-tyrosine-phosphatase YP_008918224.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008918225.1 COG4138 ABC-type cobalamin transport system, ATPase component YP_008918226.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008918228.1 COG3530 Uncharacterized protein conserved in bacteria YP_008918229.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_008918230.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_008918231.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008918232.1 COG0784 FOG: CheY-like receiver YP_008918233.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008918235.1 COG2755 Lysophospholipase L1 and related esterases YP_008918236.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_008918237.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_008918238.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_008918239.1 COG1539 Dihydroneopterin aldolase YP_008918240.1 COG0628 Predicted permease YP_008918241.1 COG0642 Signal transduction histidine kinase YP_008918242.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008918243.1 COG3212 Predicted membrane protein YP_008918244.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_008918245.1 COG2350 Uncharacterized protein conserved in bacteria YP_008918246.1 COG0159 Tryptophan synthase alpha chain YP_008918247.1 COG0133 Tryptophan synthase beta chain YP_008918248.1 COG0134 Indole-3-glycerol phosphate synthase YP_008918249.1 COG0547 Anthranilate phosphoribosyltransferase YP_008918250.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008918251.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008918252.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_008918253.1 COG0009 Putative translation factor (SUA5) YP_008918254.1 COG1354 Uncharacterized conserved protein YP_008918255.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_008918256.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008918257.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008918258.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008918259.1 COG3595 Uncharacterized conserved protein YP_008918260.1 COG2733 Predicted membrane protein YP_008918261.1 COG0500 SAM-dependent methyltransferases YP_008918262.1 COG2913 Small protein A (tmRNA-binding) YP_008918263.1 COG0497 ATPase involved in DNA repair YP_008918264.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008918265.1 COG0061 Predicted sugar kinase YP_008918266.1 COG1454 Alcohol dehydrogenase, class IV YP_008918267.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918268.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008918269.1 COG2021 Homoserine acetyltransferase YP_008918270.1 COG2610 H+/gluconate symporter and related permeases YP_008918271.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918272.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008918273.1 COG0591 Na+/proline symporter YP_008918274.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_008918275.1 COG0443 Molecular chaperone YP_008918276.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_008918277.1 COG3909 Cytochrome c556 YP_008918278.1 COG2202 FOG: PAS/PAC domain YP_008918279.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008918280.1 COG3658 Cytochrome b YP_008918281.1 COG0289 Dihydrodipicolinate reductase YP_008918282.1 COG0505 Carbamoylphosphate synthase small subunit YP_008918283.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008918284.1 COG0782 Transcription elongation factor YP_008918285.1 COG0282 Acetate kinase YP_008918286.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_008918287.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008918288.1 COG3668 Plasmid stabilization system protein YP_008918289.1 COG0815 Apolipoprotein N-acyltransferase YP_008918290.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_008918291.1 COG0319 Predicted metal-dependent hydrolase YP_008918292.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_008918293.1 COG0621 2-methylthioadenine synthetase YP_008918294.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008918297.1 COG1309 Transcriptional regulator YP_008918298.1 COG2128 Uncharacterized conserved protein YP_008918302.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918303.1 COG1607 Acyl-CoA hydrolase YP_008918304.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008918305.1 COG3806 Anti-sigma factor YP_008918307.1 COG1115 Na+/alanine symporter YP_008918308.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008918309.1 COG0012 Predicted GTPase, probable translation factor YP_008918310.1 COG0193 Peptidyl-tRNA hydrolase YP_008918312.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_008918313.1 COG1064 Zn-dependent alcohol dehydrogenases YP_008918316.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_008918317.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_008918318.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_008918319.1 COG0373 Glutamyl-tRNA reductase YP_008918320.1 COG0216 Protein chain release factor A YP_008918321.1 COG2890 Methylase of polypeptide chain release factors YP_008918322.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008918323.1 COG3094 Uncharacterized protein conserved in bacteria YP_008918324.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_008918326.1 COG0583 Transcriptional regulator YP_008918327.1 COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008918328.1 COG2363 Uncharacterized small membrane protein YP_008918329.1 COG2933 Predicted SAM-dependent methyltransferase YP_008918330.1 COG0480 Translation elongation factors (GTPases) YP_008918331.1 COG1513 Cyanate lyase YP_008918332.1 COG0631 Serine/threonine protein phosphatase YP_008918333.1 COG2116 Formate/nitrite family of transporters YP_008918334.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008918335.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008918336.1 COG0714 MoxR-like ATPases YP_008918337.1 COG3057 Negative regulator of replication initiationR YP_008918338.1 COG0033 Phosphoglucomutase YP_008918339.1 COG0058 Glucan phosphorylase YP_008918340.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008918341.1 COG2988 Succinylglutamate desuccinylase YP_008918342.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008918343.1 COG0393 Uncharacterized conserved protein YP_008918344.1 COG1301 Na+/H+-dicarboxylate symporters YP_008918346.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_008918347.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008918348.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008918349.1 COG2190 Phosphotransferase system IIA components YP_008918350.1 COG3603 Uncharacterized conserved protein YP_008918351.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008918352.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_008918353.1 COG3508 Homogentisate 1,2-dioxygenase YP_008918354.1 COG1846 Transcriptional regulators YP_008918356.1 COG0206 Cell division GTPase YP_008918358.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008918359.1 COG2199 FOG: GGDEF domain YP_008918360.1 COG0841 Cation/multidrug efflux pump YP_008918361.1 COG0845 Membrane-fusion protein YP_008918362.1 COG0475 Kef-type K+ transport systems, membrane components YP_008918363.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_008918365.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008918366.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008918367.1 COG1733 Predicted transcriptional regulators YP_008918368.1 COG2202 FOG: PAS/PAC domain YP_008918369.1 COG3748 Predicted membrane protein YP_008918370.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008918371.1 COG2351 Transthyretin-like protein YP_008918372.1 COG3195 Uncharacterized protein conserved in bacteria YP_008918373.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008918374.1 COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B YP_008918375.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_008918376.1 COG1309 Transcriptional regulator YP_008918377.1 COG0726 Predicted xylanase/chitin deacetylase YP_008918379.1 COG2252 Permeases YP_008918380.1 COG1816 Adenosine deaminase YP_008918381.1 COG0784 FOG: CheY-like receiver YP_008918382.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008918383.1 COG2200 FOG: EAL domain YP_008918384.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008918385.1 COG0642 Signal transduction histidine kinase YP_008918387.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918388.1 COG2233 Xanthine/uracil permeases YP_008918389.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_008918390.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008918391.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008918392.1 COG0730 Predicted permeases YP_008918393.1 COG0405 Gamma-glutamyltransferase YP_008918394.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008918396.1 COG3803 Uncharacterized protein conserved in bacteria YP_008918397.1 COG1737 Transcriptional regulators YP_008918398.1 COG1266 Predicted metal-dependent membrane protease YP_008918399.1 COG0668 Small-conductance mechanosensitive channel YP_008918401.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918402.1 COG3001 Fructosamine-3-kinase YP_008918403.1 COG0441 Threonyl-tRNA synthetase YP_008918404.1 COG0290 Translation initiation factor 3 (IF-3) YP_008918405.1 COG0291 Ribosomal protein L35 YP_008918406.1 COG0292 Ribosomal protein L20 YP_008918407.1 COG0845 Membrane-fusion protein YP_008918408.1 COG0841 Cation/multidrug efflux pump YP_008918409.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008918410.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918411.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008918413.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008918414.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008918415.1 COG4464 Capsular polysaccharide biosynthesis protein YP_008918416.1 COG0457 FOG: TPR repeat YP_008918418.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008918420.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008918421.1 COG3672 Predicted periplasmic protein YP_008918422.1 COG1922 Teichoic acid biosynthesis proteins YP_008918423.1 COG0438 Glycosyltransferase YP_008918424.1 COG0438 Glycosyltransferase YP_008918425.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008918426.1 COG1045 Serine acetyltransferase YP_008918427.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008918428.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008918431.1 COG3039 Transposase and inactivated derivatives, IS5 family YP_008918434.1 COG1835 Predicted acyltransferases YP_008918435.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008918436.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_008918437.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008918438.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_008918439.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_008918440.1 COG1922 Teichoic acid biosynthesis proteins YP_008918442.1 COG1309 Transcriptional regulator YP_008918443.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_008918444.1 COG0073 EMAP domain YP_008918445.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008918448.1 COG2606 Uncharacterized conserved protein YP_008918449.1 COG2366 Protein related to penicillin acylase YP_008918450.1 COG1472 Beta-glucosidase-related glycosidases YP_008918451.1 COG2096 Uncharacterized conserved protein YP_008918453.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008918455.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008918456.1 COG2236 Predicted phosphoribosyltransferases YP_008918457.1 COG0642 Signal transduction histidine kinase YP_008918458.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008918459.1 COG3235 Predicted membrane protein YP_008918460.1 COG0708 Exonuclease III YP_008918463.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008918464.1 COG0438 Glycosyltransferase YP_008918465.1 COG1639 Predicted signal transduction protein YP_008918466.1 COG1946 Acyl-CoA thioesterase YP_008918467.1 COG0477 Permeases of the major facilitator superfamily YP_008918468.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008918469.1 COG0448 ADP-glucose pyrophosphorylase YP_008918473.1 COG1943 Transposase and inactivated derivatives YP_008918474.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008918475.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_008918476.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008918477.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_008918478.1 COG1960 Acyl-CoA dehydrogenases YP_008918479.1 COG0789 Predicted transcriptional regulators YP_008918480.1 COG0183 Acetyl-CoA acetyltransferase YP_008918481.1 COG0657 Esterase/lipase YP_008918482.1 COG3844 Kynureninase YP_008918483.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008918484.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_008918485.1 COG2925 Exonuclease I YP_008918486.1 COG0642 Signal transduction histidine kinase YP_008918487.1 COG1446 Asparaginase YP_008918488.1 COG0517 FOG: CBS domain YP_008918489.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_008918490.1 COG1409 Predicted phosphohydrolases YP_008918492.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918493.1 COG2199 FOG: GGDEF domain YP_008918494.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008918495.1 COG1757 Na+/H+ antiporter YP_008918496.1 COG1643 HrpA-like helicases YP_008918498.1 COG3205 Predicted membrane protein YP_008918499.1 COG1092 Predicted SAM-dependent methyltransferases YP_008918500.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008918501.1 COG0328 Ribonuclease HI YP_008918502.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008918504.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains YP_008918505.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008918506.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008918507.1 COG1301 Na+/H+-dicarboxylate symporters YP_008918509.1 COG3724 Succinylarginine dihydrolase YP_008918511.1 COG0550 Topoisomerase IA YP_008918512.1 COG3122 Uncharacterized protein conserved in bacteria YP_008918513.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_008918514.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008918515.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008918516.1 COG2153 Predicted acyltransferase YP_008918517.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008918519.1 COG1530 Ribonucleases G and E YP_008918520.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008918521.1 COG0546 Predicted phosphatases YP_008918522.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008918523.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_008918524.1 COG0333 Ribosomal protein L32 YP_008918525.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_008918526.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008918527.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_008918528.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918529.1 COG0236 Acyl carrier protein YP_008918530.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008918531.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008918532.1 COG1559 Predicted periplasmic solute-binding protein YP_008918533.1 COG0125 Thymidylate kinase YP_008918534.1 COG0470 ATPase involved in DNA replication YP_008918535.1 COG0084 Mg-dependent DNase YP_008918536.1 COG5135 Uncharacterized conserved protein YP_008918537.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008918538.1 COG2199 FOG: GGDEF domain YP_008918540.1 COG3296 Uncharacterized protein conserved in bacteria YP_008918542.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918543.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008918544.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008918545.1 COG0183 Acetyl-CoA acetyltransferase YP_008918546.1 COG1960 Acyl-CoA dehydrogenases YP_008918549.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_008918550.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008918551.1 COG1457 Purine-cytosine permease and related proteins YP_008918552.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008918554.1 COG0583 Transcriptional regulator YP_008918555.1 COG2030 Acyl dehydratase YP_008918557.1 COG0668 Small-conductance mechanosensitive channel YP_008918558.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918559.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_008918560.1 COG3300 MHYT domain (predicted integral membrane sensor domain) YP_008918561.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008918562.1 COG0779 Uncharacterized protein conserved in bacteria YP_008918563.1 COG0195 Transcription elongation factor YP_008918564.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_008918565.1 COG0858 Ribosome-binding factor A YP_008918566.1 COG0130 Pseudouridine synthase YP_008918568.1 COG0184 Ribosomal protein S15P/S13E YP_008918569.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008918570.1 COG1196 Chromosome segregation ATPases YP_008918571.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008918573.1 COG3751 Predicted proline hydroxylase YP_008918575.1 COG0784 FOG: CheY-like receiver YP_008918576.1 COG2374 Predicted extracellular nuclease YP_008918577.1 COG4320 Uncharacterized protein conserved in bacteria YP_008918579.1 COG0450 Peroxiredoxin YP_008918580.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_008918582.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008918584.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_008918585.1 COG3386 Gluconolactonase YP_008918586.1 COG0793 Periplasmic protease YP_008918587.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008918588.1 COG1032 Fe-S oxidoreductase YP_008918589.1 COG2947 Uncharacterized conserved protein YP_008918591.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918592.1 COG0398 Uncharacterized conserved protein YP_008918594.1 COG4134 ABC-type uncharacterized transport system, periplasmic component YP_008918595.1 COG4135 ABC-type uncharacterized transport system, permease component YP_008918596.1 COG4136 ABC-type uncharacterized transport system, ATPase component YP_008918597.1 COG0558 Phosphatidylglycerophosphate synthase YP_008918598.1 COG3000 Sterol desaturase YP_008918600.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008918602.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008918606.1 COG0583 Transcriptional regulator YP_008918607.1 COG0583 Transcriptional regulator YP_008918611.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008918612.1 COG0730 Predicted permeases YP_008918613.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918614.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008918615.1 COG0385 Predicted Na+-dependent transporter YP_008918616.1 COG2072 Predicted flavoprotein involved in K+ transport YP_008918617.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008918619.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008918620.1 COG0691 tmRNA-binding protein YP_008918621.1 COG2867 Oligoketide cyclase/lipid transport protein YP_008918622.1 COG2914 Uncharacterized protein conserved in bacteria YP_008918623.1 COG1846 Transcriptional regulators YP_008918624.1 COG1292 Choline-glycine betaine transporter YP_008918625.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918626.1 COG0457 FOG: TPR repeat YP_008918628.1 COG1806 Uncharacterized protein conserved in bacteria YP_008918629.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_008918631.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008918632.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008918636.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008918637.1 COG2850 Uncharacterized conserved protein YP_008918638.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_008918639.1 COG0015 Adenylosuccinate lyase YP_008918640.1 COG2915 Uncharacterized protein involved in purine metabolism YP_008918641.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_008918642.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008918643.1 COG2838 Monomeric isocitrate dehydrogenase YP_008918644.1 COG1278 Cold shock proteins YP_008918645.1 COG2127 Uncharacterized conserved protein YP_008918646.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008918647.1 COG0361 Translation initiation factor 1 (IF-1) YP_008918648.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_008918649.1 COG2360 Leu/Phe-tRNA-protein transferase YP_008918650.1 COG0492 Thioredoxin reductase YP_008918651.1 COG3092 Uncharacterized protein conserved in bacteria YP_008918652.1 COG3091 Uncharacterized protein conserved in bacteria YP_008918653.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008918655.1 COG2259 Predicted membrane protein YP_008918656.1 COG0778 Nitroreductase YP_008918658.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_008918659.1 COG0320 Lipoate synthase YP_008918660.1 COG0321 Lipoate-protein ligase B YP_008918661.1 COG2921 Uncharacterized conserved protein YP_008918662.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008918663.1 COG0797 Lipoproteins YP_008918664.1 COG0772 Bacterial cell division membrane protein YP_008918665.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008918666.1 COG1576 Uncharacterized conserved protein YP_008918667.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_008918668.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_008918669.1 COG1466 DNA polymerase III, delta subunit YP_008918670.1 COG2980 Rare lipoprotein B YP_008918671.1 COG0495 Leucyl-tRNA synthetase YP_008918674.1 COG1067 Predicted ATP-dependent protease YP_008918675.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008918676.1 COG2199 FOG: GGDEF domain YP_008918677.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918678.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_008918679.1 COG0293 23S rRNA methylase YP_008918680.1 COG0465 ATP-dependent Zn proteases YP_008918681.1 COG0294 Dihydropteroate synthase and related enzymes YP_008918682.1 COG1109 Phosphomannomutase YP_008918683.1 COG0149 Triosephosphate isomerase YP_008918684.1 COG1314 Preprotein translocase subunit SecG YP_008918687.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918688.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008918690.1 COG3569 Topoisomerase IB YP_008918691.1 COG0591 Na+/proline symporter YP_008918692.1 COG0263 Glutamate 5-kinase YP_008918693.1 COG0014 Gamma-glutamyl phosphate reductase YP_008918694.1 COG0668 Small-conductance mechanosensitive channel YP_008918695.1 COG1403 Restriction endonuclease YP_008918696.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_008918697.1 COG3492 Uncharacterized protein conserved in bacteria YP_008918699.1 COG3436 Transposase and inactivated derivatives YP_008918700.1 COG2801 Transposase and inactivated derivatives YP_008918701.1 COG1396 Predicted transcriptional regulators YP_008918702.1 COG2405 Predicted nucleic acid-binding protein, contains PIN domain YP_008918703.1 COG0582 Integrase YP_008918708.1 COG3839 ABC-type sugar transport systems, ATPase components YP_008918711.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008918715.1 COG0563 Adenylate kinase and related kinases YP_008918718.1 COG5331 Uncharacterized protein conserved in bacteria YP_008918723.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008918724.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008918726.1 COG0295 Cytidine deaminase YP_008918727.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_008918728.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008918729.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_008918730.1 COG1196 Chromosome segregation ATPases YP_008918731.1 COG3115 Cell division protein YP_008918732.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_008918733.1 COG3216 Uncharacterized protein conserved in bacteria YP_008918734.1 COG0658 Predicted membrane metal-binding protein YP_008918735.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008918736.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_008918737.1 COG2835 Uncharacterized conserved protein YP_008918738.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008918739.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918740.1 COG0621 2-methylthioadenine synthetase YP_008918743.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_008918744.1 COG0435 Predicted glutathione S-transferase YP_008918745.1 COG1741 Pirin-related protein YP_008918746.1 COG1109 Phosphomannomutase YP_008918748.1 COG0372 Citrate synthase YP_008918749.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_008918750.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_008918751.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_008918752.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_008918753.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_008918754.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008918755.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_008918756.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_008918757.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918758.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008918759.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008918760.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008918761.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008918762.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008918763.1 COG3176 Putative hemolysin YP_008918764.1 COG0366 Glycosidases YP_008918765.1 COG0366 Glycosidases YP_008918766.1 COG0477 Permeases of the major facilitator superfamily YP_008918767.1 COG0366 Glycosidases YP_008918768.1 COG1609 Transcriptional regulators YP_008918769.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008918770.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008918771.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008918772.1 COG2366 Protein related to penicillin acylase YP_008918773.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008918774.1 COG1309 Transcriptional regulator YP_008918776.1 COG0327 Uncharacterized conserved protein YP_008918777.1 COG0500 SAM-dependent methyltransferases YP_008918778.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008918779.1 COG0386 Glutathione peroxidase YP_008918780.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008918781.1 COG0784 FOG: CheY-like receiver YP_008918782.1 COG1960 Acyl-CoA dehydrogenases YP_008918783.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008918785.1 COG0500 SAM-dependent methyltransferases YP_008918786.1 COG0241 Histidinol phosphatase and related phosphatases YP_008918787.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_008918788.1 COG3082 Uncharacterized protein conserved in bacteria YP_008918789.1 COG3081 Nucleoid-associated protein YP_008918790.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_008918791.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008918792.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_008918794.1 COG4539 Predicted membrane protein YP_008918795.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_008918796.1 COG3279 Response regulator of the LytR/AlgR family YP_008918797.1 COG0205 6-phosphofructokinase YP_008918799.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_008918800.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008918802.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008918803.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008918804.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008918805.1 COG0583 Transcriptional regulator YP_008918806.1 COG0582 Integrase YP_008918809.1 COG2801 Transposase and inactivated derivatives YP_008918810.1 COG2608 Copper chaperone YP_008918812.1 COG0789 Predicted transcriptional regulators YP_008918814.1 COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif YP_008918815.1 COG0784 FOG: CheY-like receiver YP_008918817.1 COG1054 Predicted sulfurtransferase YP_008918818.1 COG5126 Ca2+-binding protein (EF-Hand superfamily) YP_008918819.1 COG0513 Superfamily II DNA and RNA helicases YP_008918820.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_008918821.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_008918822.1 COG0583 Transcriptional regulator YP_008918824.1 COG0642 Signal transduction histidine kinase YP_008918825.1 COG0583 Transcriptional regulator YP_008918826.1 COG1760 L-serine deaminase YP_008918827.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008918828.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008918829.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_008918831.1 COG1322 Uncharacterized protein conserved in bacteria YP_008918832.1 COG1404 Subtilisin-like serine proteases YP_008918833.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_008918834.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_008918835.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008918836.1 COG2961 Protein involved in catabolism of external DNA YP_008918837.1 COG0515 Serine/threonine protein kinase YP_008918838.1 COG1946 Acyl-CoA thioesterase YP_008918839.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008918840.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008918841.1 COG2968 Uncharacterized conserved protein YP_008918842.1 COG1956 GAF domain-containing protein YP_008918844.1 COG3109 Activator of osmoprotectant transporter ProP YP_008918845.1 COG0793 Periplasmic protease YP_008918846.1 COG0733 Na+-dependent transporters of the SNF family YP_008918847.1 COG1757 Na+/H+ antiporter YP_008918848.1 COG0308 Aminopeptidase N YP_008918852.1 COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor YP_008918853.1 COG1033 Predicted exporters of the RND superfamily YP_008918854.1 COG2902 NAD-specific glutamate dehydrogenase YP_008918855.1 COG0167 Dihydroorotate dehydrogenase YP_008918856.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_008918857.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008918858.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008918860.1 COG3130 Ribosome modulation factor YP_008918861.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008918863.1 COG0415 Deoxyribodipyrimidine photolyase YP_008918864.1 COG0415 Deoxyribodipyrimidine photolyase YP_008918865.1 COG0415 Deoxyribodipyrimidine photolyase YP_008918866.1 COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase YP_008918867.1 COG4338 Uncharacterized protein conserved in bacteria YP_008918868.1 COG4325 Predicted membrane protein YP_008918869.1 COG4974 Site-specific recombinase XerD YP_008918871.1 COG0818 Diacylglycerol kinase YP_008918872.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008918874.1 COG0069 Glutamate synthase domain 2 YP_008918875.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_008918876.1 COG2193 Bacterioferritin (cytochrome b1) YP_008918877.1 COG2193 Bacterioferritin (cytochrome b1) YP_008918879.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_008918880.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_008918881.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_008918882.1 COG2010 Cytochrome c, mono- and diheme variants YP_008918883.1 COG3198 Uncharacterized protein conserved in bacteria YP_008918884.1 COG2217 Cation transport ATPase YP_008918885.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_008918886.1 COG2836 Uncharacterized conserved protein YP_008918887.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008918888.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008918889.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008918890.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008918892.1 COG2992 Uncharacterized FlgJ-related protein YP_008918894.1 COG1280 Putative threonine efflux protein YP_008918895.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_008918896.1 COG2897 Rhodanese-related sulfurtransferase YP_008918897.1 COG2077 Peroxiredoxin YP_008918898.1 COG3148 Uncharacterized conserved protein YP_008918899.1 COG0558 Phosphatidylglycerophosphate synthase YP_008918900.1 COG0322 Nuclease subunit of the excinuclease complex YP_008918901.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008918902.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008918903.1 COG1262 Uncharacterized conserved protein YP_008918909.1 COG1061 DNA or RNA helicases of superfamily II YP_008918910.1 COG4974 Site-specific recombinase XerD YP_008918912.1 COG1484 DNA replication protein YP_008918913.1 COG4584 Transposase and inactivated derivatives YP_008918917.1 COG0789 Predicted transcriptional regulators YP_008918918.1 COG3547 Transposase and inactivated derivatives YP_008918919.1 COG3384 Uncharacterized conserved protein YP_008918920.1 COG2259 Predicted membrane protein YP_008918921.1 COG0583 Transcriptional regulator YP_008918924.1 COG0670 Integral membrane protein, interacts with FtsH YP_008918925.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_008918926.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_008918928.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_008918931.1 COG0172 Seryl-tRNA synthetase YP_008918932.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_008918933.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_008918934.1 COG2834 Outer membrane lipoprotein-sorting protein YP_008918935.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_008918936.1 COG1522 Transcriptional regulators YP_008918937.1 COG0686 Alanine dehydrogenase YP_008918938.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_008918939.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_008918940.1 COG3771 Predicted membrane protein YP_008918941.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008918942.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008918943.1 COG0539 Ribosomal protein S1 YP_008918944.1 COG0283 Cytidylate kinase YP_008918945.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_008918946.1 COG1932 Phosphoserine aminotransferase YP_008918947.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008918948.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008918949.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008918950.1 COG0208 Ribonucleotide reductase, beta subunit YP_008918951.1 COG0633 Ferredoxin YP_008918952.1 COG5460 Uncharacterized conserved protein YP_008918954.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008918955.1 COG2203 FOG: GAF domain YP_008918956.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008918957.1 COG3344 Retron-type reverse transcriptase YP_008918958.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_008918959.1 COG3317 Uncharacterized lipoprotein YP_008918960.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008918961.1 COG2716 Glycine cleavage system regulatory protein YP_008918962.1 COG1225 Peroxiredoxin YP_008918963.1 COG0628 Predicted permease YP_008918964.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_008918965.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008918966.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008918967.1 COG0655 Multimeric flavodoxin WrbA YP_008918968.1 COG3308 Predicted membrane protein YP_008918969.1 COG0593 ATPase involved in DNA replication initiation YP_008918970.1 COG3249 Uncharacterized protein conserved in bacteria YP_008918971.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_008918972.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_008918974.1 COG1960 Acyl-CoA dehydrogenases YP_008918975.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_008918976.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008918977.1 COG0500 SAM-dependent methyltransferases YP_008918978.1 COG0500 SAM-dependent methyltransferases YP_008918979.1 COG4240 Predicted kinase YP_008918980.1 COG3769 Predicted hydrolase (HAD superfamily) YP_008918981.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008918982.1 COG0366 Glycosidases YP_008918983.1 COG0546 Predicted phosphatases YP_008918984.1 COG0303 Molybdopterin biosynthesis enzyme YP_008918985.1 COG0534 Na+-driven multidrug efflux pump YP_008918986.1 COG2068 Uncharacterized MobA-related protein YP_008918987.1 COG3825 Uncharacterized protein conserved in bacteria YP_008918988.1 COG0714 MoxR-like ATPases YP_008918989.1 COG0031 Cysteine synthase YP_008918993.1 COG3547 Transposase and inactivated derivatives YP_008918995.1 COG3668 Plasmid stabilization system protein YP_008918997.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_008918998.1 COG2944 Predicted transcriptional regulator YP_008919001.1 COG3547 Transposase and inactivated derivatives YP_008919002.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008919003.1 COG3668 Plasmid stabilization system protein YP_008919005.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008919006.1 COG0405 Gamma-glutamyltransferase YP_008919007.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008919008.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008919009.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008919010.1 COG0386 Glutathione peroxidase YP_008919011.1 COG1182 Acyl carrier protein phosphodiesterase YP_008919013.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008919014.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008919015.1 COG3332 Uncharacterized conserved protein YP_008919016.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_008919019.1 COG1671 Uncharacterized protein conserved in bacteria YP_008919020.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919021.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919022.1 COG1960 Acyl-CoA dehydrogenases YP_008919023.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_008919024.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919026.1 COG1505 Serine proteases of the peptidase family S9A YP_008919027.1 COG0841 Cation/multidrug efflux pump YP_008919028.1 COG0845 Membrane-fusion protein YP_008919030.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_008919031.1 COG2086 Electron transfer flavoprotein, beta subunit YP_008919032.1 COG0644 Dehydrogenases (flavoproteins) YP_008919033.1 COG2916 DNA-binding protein H-NS YP_008919034.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008919036.1 COG0716 Flavodoxins YP_008919037.1 COG1530 Ribonucleases G and E YP_008919040.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008919041.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008919042.1 COG0840 Methyl-accepting chemotaxis protein YP_008919043.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008919044.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008919045.1 COG1984 Allophanate hydrolase subunit 2 YP_008919046.1 COG2049 Allophanate hydrolase subunit 1 YP_008919047.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_008919048.1 COG2996 Uncharacterized protein conserved in bacteria YP_008919049.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_008919050.1 COG0845 Membrane-fusion protein YP_008919051.1 COG0841 Cation/multidrug efflux pump YP_008919052.1 COG0841 Cation/multidrug efflux pump YP_008919055.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008919056.1 COG1896 Predicted hydrolases of HD superfamily YP_008919057.1 COG1896 Predicted hydrolases of HD superfamily YP_008919059.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008919060.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008919062.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008919063.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008919064.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919065.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008919066.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008919067.1 COG1896 Predicted hydrolases of HD superfamily YP_008919068.1 COG0232 dGTP triphosphohydrolase YP_008919069.1 COG2041 Sulfite oxidase and related enzymes YP_008919070.1 COG2717 Predicted membrane protein YP_008919071.1 COG1238 Predicted membrane protein YP_008919073.1 COG3012 Uncharacterized protein conserved in bacteria YP_008919075.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008919076.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008919077.1 COG1960 Acyl-CoA dehydrogenases YP_008919078.1 COG0406 Fructose-2,6-bisphosphatase YP_008919079.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919080.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008919081.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_008919082.1 COG2755 Lysophospholipase L1 and related esterases YP_008919083.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008919084.1 COG4148 ABC-type molybdate transport system, ATPase component YP_008919085.1 COG4149 ABC-type molybdate transport system, permease component YP_008919086.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_008919087.1 COG0314 Molybdopterin converting factor, large subunit YP_008919088.1 COG1977 Molybdopterin converting factor, small subunit YP_008919089.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_008919090.1 COG0521 Molybdopterin biosynthesis enzymes YP_008919091.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008919092.1 COG3608 Predicted deacylase YP_008919093.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008919094.1 COG4115 Uncharacterized protein conserved in bacteria YP_008919097.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008919098.1 COG3268 Uncharacterized conserved protein YP_008919099.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008919102.1 COG0620 Methionine synthase II (cobalamin-independent) YP_008919103.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919105.1 COG5006 Predicted permease, DMT superfamily YP_008919108.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_008919109.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_008919110.1 COG1330 Exonuclease V gamma subunit YP_008919114.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008919115.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008919116.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_008919119.1 COG0583 Transcriptional regulator YP_008919121.1 COG3085 Uncharacterized protein conserved in bacteria YP_008919122.1 COG3861 Uncharacterized protein conserved in bacteria YP_008919123.1 COG0640 Predicted transcriptional regulators YP_008919124.1 COG0607 Rhodanese-related sulfurtransferase YP_008919125.1 COG0583 Transcriptional regulator YP_008919126.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008919127.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008919128.1 COG0642 Signal transduction histidine kinase YP_008919129.1 COG0642 Signal transduction histidine kinase YP_008919130.1 COG0784 FOG: CheY-like receiver YP_008919131.1 COG0642 Signal transduction histidine kinase YP_008919136.1 COG1896 Predicted hydrolases of HD superfamily YP_008919141.1 COG3139 Uncharacterized protein conserved in bacteria YP_008919144.1 COG1115 Na+/alanine symporter YP_008919145.1 COG2866 Predicted carboxypeptidase YP_008919146.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008919148.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_008919149.1 COG0362 6-phosphogluconate dehydrogenase YP_008919150.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008919151.1 COG0296 1,4-alpha-glucan branching enzyme YP_008919152.1 COG1640 4-alpha-glucanotransferase YP_008919153.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008919154.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_008919155.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008919156.1 COG0837 Glucokinase YP_008919157.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008919158.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008919159.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008919160.1 COG1737 Transcriptional regulators YP_008919161.1 COG0469 Pyruvate kinase YP_008919162.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008919163.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008919164.1 COG1960 Acyl-CoA dehydrogenases YP_008919165.1 COG2086 Electron transfer flavoprotein, beta subunit YP_008919166.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_008919167.1 COG0644 Dehydrogenases (flavoproteins) YP_008919168.1 COG0471 Di- and tricarboxylate transporters YP_008919170.1 COG0837 Glucokinase YP_008919171.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008919172.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008919173.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008919174.1 COG1737 Transcriptional regulators YP_008919175.1 COG0469 Pyruvate kinase YP_008919176.1 COG0775 Nucleoside phosphorylase YP_008919178.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008919179.1 COG3021 Uncharacterized protein conserved in bacteria YP_008919181.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008919182.1 COG3403 Uncharacterized conserved protein YP_008919183.1 COG3665 Uncharacterized conserved protein YP_008919185.1 COG3211 Predicted phosphatase YP_008919186.1 COG2378 Predicted transcriptional regulator YP_008919187.1 COG2894 Septum formation inhibitor-activating ATPase YP_008919188.1 COG2356 Endonuclease I YP_008919189.1 COG0840 Methyl-accepting chemotaxis protein YP_008919191.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008919192.1 COG0583 Transcriptional regulator YP_008919193.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_008919194.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008919195.1 COG0778 Nitroreductase YP_008919196.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008919197.1 COG2203 FOG: GAF domain YP_008919198.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008919199.1 COG0471 Di- and tricarboxylate transporters YP_008919200.1 COG0717 Deoxycytidine deaminase YP_008919201.1 COG0489 ATPases involved in chromosome partitioning YP_008919202.1 COG0143 Methionyl-tRNA synthetase YP_008919203.1 COG0668 Small-conductance mechanosensitive channel YP_008919204.1 COG0500 SAM-dependent methyltransferases YP_008919205.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008919206.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008919208.1 COG0215 Cysteinyl-tRNA synthetase YP_008919209.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008919210.1 COG2908 Uncharacterized protein conserved in bacteria YP_008919212.1 COG2268 Uncharacterized protein conserved in bacteria YP_008919214.1 COG0366 Glycosidases YP_008919215.1 COG1733 Predicted transcriptional regulators YP_008919216.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008919217.1 COG0753 Catalase YP_008919218.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008919219.1 COG0583 Transcriptional regulator YP_008919222.1 COG2939 Carboxypeptidase C (cathepsin A) YP_008919223.1 COG3124 Uncharacterized protein conserved in bacteria YP_008919224.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_008919226.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_008919227.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_008919228.1 COG3147 Uncharacterized protein conserved in bacteria YP_008919229.1 COG0285 Folylpolyglutamate synthase YP_008919230.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_008919231.1 COG0101 Pseudouridylate synthase YP_008919232.1 COG3170 Tfp pilus assembly protein FimV YP_008919233.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008919234.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008919235.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008919236.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008919237.1 COG3668 Plasmid stabilization system protein YP_008919238.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008919239.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008919240.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008919241.1 COG3055 Uncharacterized protein conserved in bacteria YP_008919242.1 COG4121 Uncharacterized conserved protein YP_008919243.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008919246.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008919248.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008919251.1 COG0789 Predicted transcriptional regulators YP_008919252.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008919253.1 COG2989 Uncharacterized protein conserved in bacteria YP_008919254.1 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA YP_008919255.1 COG2031 Short chain fatty acids transporter YP_008919256.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_008919257.1 COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit YP_008919258.1 COG0612 Predicted Zn-dependent peptidases YP_008919260.1 COG3199 Uncharacterized conserved protein YP_008919261.1 COG3101 Uncharacterized protein conserved in bacteria YP_008919263.1 COG0824 Predicted thioesterase YP_008919264.1 COG3577 Predicted aspartyl protease YP_008919266.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008919267.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008919268.1 COG1309 Transcriptional regulator YP_008919269.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008919272.1 COG1309 Transcriptional regulator YP_008919273.1 COG4399 Uncharacterized protein conserved in bacteria YP_008919274.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008919278.1 COG1770 Protease II YP_008919279.1 COG2186 Transcriptional regulators YP_008919280.1 COG3067 Na+/H+ antiporter YP_008919281.1 COG1495 Disulfide bond formation protein DsbB YP_008919282.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008919284.1 COG2983 Uncharacterized conserved protein YP_008919285.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008919286.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008919287.1 COG3100 Uncharacterized protein conserved in bacteria YP_008919288.1 COG0349 Ribonuclease D YP_008919289.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008919290.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008919291.1 COG3065 Starvation-inducible outer membrane lipoprotein YP_008919293.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_008919294.1 COG1199 Rad3-related DNA helicases YP_008919296.1 COG0671 Membrane-associated phospholipid phosphatase YP_008919299.1 COG0366 Glycosidases YP_008919303.1 COG2930 Uncharacterized conserved protein YP_008919304.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008919306.1 COG0040 ATP phosphoribosyltransferase YP_008919307.1 COG0141 Histidinol dehydrogenase YP_008919308.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008919309.1 COG0241 Histidinol phosphatase and related phosphatases YP_008919310.1 COG0118 Glutamine amidotransferase YP_008919311.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_008919312.1 COG0107 Imidazoleglycerol-phosphate synthase YP_008919313.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_008919314.1 COG2116 Formate/nitrite family of transporters YP_008919315.1 COG0840 Methyl-accepting chemotaxis protein YP_008919316.1 COG0612 Predicted Zn-dependent peptidases YP_008919317.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919318.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919320.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily YP_008919321.1 COG0563 Adenylate kinase and related kinases YP_008919322.1 COG0326 Molecular chaperone, HSP90 family YP_008919323.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_008919325.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008919326.1 COG0718 Uncharacterized protein conserved in bacteria YP_008919327.1 COG2812 DNA polymerase III, gamma/tau subunits YP_008919328.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_008919329.1 COG3219 Uncharacterized protein conserved in bacteria YP_008919330.1 COG3220 Uncharacterized protein conserved in bacteria YP_008919332.1 COG3710 DNA-binding winged-HTH domains YP_008919334.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008919336.1 COG1183 Phosphatidylserine synthase YP_008919339.1 COG0457 FOG: TPR repeat YP_008919340.1 COG0277 FAD/FMN-containing dehydrogenases YP_008919341.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008919342.1 COG1496 Uncharacterized conserved protein YP_008919343.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008919344.1 COG4105 DNA uptake lipoprotein YP_008919345.1 COG3806 Anti-sigma factor YP_008919346.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008919347.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_008919349.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919350.1 COG2907 Predicted NAD/FAD-binding protein YP_008919351.1 COG3496 Uncharacterized conserved protein YP_008919352.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_008919353.1 COG1360 Flagellar motor protein YP_008919354.1 COG1291 Flagellar motor component YP_008919355.1 COG1722 Exonuclease VII small subunit YP_008919356.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008919357.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_008919358.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_008919359.1 COG0611 Thiamine monophosphate kinase YP_008919360.1 COG0781 Transcription termination factor YP_008919361.1 COG0054 Riboflavin synthase beta-chain YP_008919362.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008919363.1 COG0307 Riboflavin synthase alpha chain YP_008919364.1 COG0117 Pyrimidine deaminase YP_008919365.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_008919366.1 COG0112 Glycine/serine hydroxymethyltransferase YP_008919367.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_008919368.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008919370.1 COG1066 Predicted ATP-dependent serine protease YP_008919372.1 COG0560 Phosphoserine phosphatase YP_008919374.1 COG0084 Mg-dependent DNase YP_008919375.1 COG0259 Pyridoxamine-phosphate oxidase YP_008919376.1 COG1159 GTPase YP_008919377.1 COG0571 dsRNA-specific ribonuclease YP_008919378.1 COG0681 Signal peptidase I YP_008919379.1 COG0481 Membrane GTPase LepA YP_008919380.1 COG3086 Positive regulator of sigma E activity YP_008919381.1 COG3026 Negative regulator of sigma E activity YP_008919382.1 COG3073 Negative regulator of sigma E activity YP_008919383.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008919384.1 COG0029 Aspartate oxidase YP_008919385.1 COG2030 Acyl dehydratase YP_008919387.1 COG2938 Uncharacterized conserved protein YP_008919388.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_008919389.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008919390.1 COG0347 Nitrogen regulatory protein PII YP_008919391.1 COG0171 NAD synthase YP_008919392.1 COG4970 Tfp pilus assembly protein FimT YP_008919393.1 COG4968 Tfp pilus assembly protein PilE YP_008919395.1 COG4795 Type II secretory pathway, component PulJ YP_008919398.1 COG4968 Tfp pilus assembly protein PilE YP_008919399.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_008919400.1 COG4726 Tfp pilus assembly protein PilX YP_008919401.1 COG4966 Tfp pilus assembly protein PilW YP_008919403.1 COG0761 Penicillin tolerance protein YP_008919404.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008919405.1 COG0597 Lipoprotein signal peptidase YP_008919406.1 COG0060 Isoleucyl-tRNA synthetase YP_008919407.1 COG0196 FAD synthase YP_008919408.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_008919409.1 COG0268 Ribosomal protein S20 YP_008919410.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919411.1 COG3173 Predicted aminoglycoside phosphotransferase YP_008919412.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919413.1 COG0385 Predicted Na+-dependent transporter YP_008919414.1 COG0583 Transcriptional regulator YP_008919415.1 COG2908 Uncharacterized protein conserved in bacteria YP_008919416.1 COG3176 Putative hemolysin YP_008919417.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008919418.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008919419.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008919421.1 COG0466 ATP-dependent Lon protease, bacterial type YP_008919422.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_008919423.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008919424.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_008919425.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_008919426.1 COG3310 Uncharacterized protein conserved in bacteria YP_008919427.1 COG1720 Uncharacterized conserved protein YP_008919428.1 COG0442 Prolyl-tRNA synthetase YP_008919429.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008919430.1 COG2829 Outer membrane phospholipase A YP_008919431.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008919432.1 COG0840 Methyl-accepting chemotaxis protein YP_008919433.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_008919434.1 COG0516 IMP dehydrogenase/GMP reductase YP_008919435.1 COG1570 Exonuclease VII, large subunit YP_008919438.1 COG1160 Predicted GTPases YP_008919439.1 COG1520 FOG: WD40-like repeat YP_008919440.1 COG2976 Uncharacterized protein conserved in bacteria YP_008919441.1 COG0124 Histidyl-tRNA synthetase YP_008919442.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_008919443.1 COG1426 Uncharacterized protein conserved in bacteria YP_008919444.1 COG3063 Tfp pilus assembly protein PilF YP_008919445.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_008919446.1 COG0105 Nucleoside diphosphate kinase YP_008919447.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008919448.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_008919449.1 COG0316 Uncharacterized conserved protein YP_008919450.1 COG0520 Selenocysteine lyase YP_008919451.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008919452.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_008919453.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_008919454.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_008919455.1 COG1959 Predicted transcriptional regulator YP_008919456.1 COG2072 Predicted flavoprotein involved in K+ transport YP_008919457.1 COG1045 Serine acetyltransferase YP_008919458.1 COG0565 rRNA methylase YP_008919459.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_008919461.1 COG3279 Response regulator of the LytR/AlgR family YP_008919462.1 COG0341 Preprotein translocase subunit SecF YP_008919463.1 COG0342 Preprotein translocase subunit SecD YP_008919464.1 COG1862 Preprotein translocase subunit YajC YP_008919465.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_008919466.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_008919468.1 COG3789 Uncharacterized protein conserved in bacteria YP_008919469.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008919470.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008919472.1 COG3766 Predicted membrane protein YP_008919473.1 COG5463 Predicted integral membrane protein YP_008919474.1 COG0754 Glutathionylspermidine synthase YP_008919475.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008919477.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008919478.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008919479.1 COG5621 Predicted secreted hydrolase YP_008919480.1 COG2066 Glutaminase YP_008919481.1 COG1785 Alkaline phosphatase YP_008919482.1 COG0835 Chemotaxis signal transduction protein YP_008919483.1 COG2224 Isocitrate lyase YP_008919484.1 COG0583 Transcriptional regulator YP_008919485.1 COG2225 Malate synthase YP_008919486.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008919487.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008919489.1 COG4962 Flp pilus assembly protein, ATPase CpaF YP_008919492.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008919493.1 COG1434 Uncharacterized conserved protein YP_008919494.1 COG3176 Putative hemolysin YP_008919496.1 COG0457 FOG: TPR repeat YP_008919498.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008919501.1 COG0438 Glycosyltransferase YP_008919505.1 COG0438 Glycosyltransferase YP_008919506.1 COG1835 Predicted acyltransferases YP_008919507.1 COG2755 Lysophospholipase L1 and related esterases YP_008919508.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_008919509.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_008919510.1 COG0438 Glycosyltransferase YP_008919511.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008919513.1 COG0438 Glycosyltransferase YP_008919515.1 COG0438 Glycosyltransferase YP_008919516.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_008919517.1 COG0279 Phosphoheptose isomerase YP_008919518.1 COG2605 Predicted kinase related to galactokinase and mevalonate kinase YP_008919519.1 COG0438 Glycosyltransferase YP_008919520.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008919521.1 COG0438 Glycosyltransferase YP_008919523.1 COG2348 Uncharacterized protein involved in methicillin resistance YP_008919524.1 COG0726 Predicted xylanase/chitin deacetylase YP_008919525.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_008919526.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008919527.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_008919528.1 COG0489 ATPases involved in chromosome partitioning YP_008919530.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008919531.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_008919532.1 COG2827 Predicted endonuclease containing a URI domain YP_008919535.1 COG1391 Glutamine synthetase adenylyltransferase YP_008919537.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008919541.1 COG2834 Outer membrane lipoprotein-sorting protein YP_008919542.1 COG1033 Predicted exporters of the RND superfamily YP_008919543.1 COG1960 Acyl-CoA dehydrogenases YP_008919545.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919546.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008919547.1 COG1435 Thymidine kinase YP_008919548.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919549.1 COG1609 Transcriptional regulators YP_008919550.1 COG0035 Uracil phosphoribosyltransferase YP_008919551.1 COG1396 Predicted transcriptional regulators YP_008919555.1 COG1161 Predicted GTPases YP_008919556.1 COG0566 rRNA methylases YP_008919557.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008919558.1 COG4539 Predicted membrane protein YP_008919559.1 COG0466 ATP-dependent Lon protease, bacterial type YP_008919560.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008919561.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008919562.1 COG1292 Choline-glycine betaine transporter YP_008919564.1 COG3129 Predicted SAM-dependent methyltransferase YP_008919565.1 COG0006 Xaa-Pro aminopeptidase YP_008919569.1 COG1960 Acyl-CoA dehydrogenases YP_008919570.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008919572.1 COG1416 Uncharacterized conserved protein YP_008919574.1 COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_008919575.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008919576.1 COG0642 Signal transduction histidine kinase YP_008919577.1 COG3072 Adenylate cyclase YP_008919578.1 COG3682 Predicted transcriptional regulator YP_008919579.1 COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component YP_008919581.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008919582.1 COG0346 Lactoylglutathione lyase and related lyases YP_008919583.1 COG4807 Uncharacterized protein conserved in bacteria YP_008919584.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008919585.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_008919586.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008919587.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008919588.1 COG4206 Outer membrane cobalamin receptor protein YP_008919590.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008919592.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008919593.1 COG0693 Putative intracellular protease/amidase YP_008919594.1 COG1295 Predicted membrane protein YP_008919596.1 COG4681 Uncharacterized protein conserved in bacteria YP_008919601.1 COG0778 Nitroreductase YP_008919602.1 COG0477 Permeases of the major facilitator superfamily YP_008919603.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008919605.1 COG0514 Superfamily II DNA helicase YP_008919607.1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain YP_008919609.1 COG0642 Signal transduction histidine kinase YP_008919611.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008919612.1 COG2133 Glucose/sorbosone dehydrogenases YP_008919613.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008919615.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008919616.1 COG0830 Urease accessory protein UreF YP_008919617.1 COG2371 Urease accessory protein UreE YP_008919618.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_008919619.1 COG0832 Urea amidohydrolase (urease) beta subunit YP_008919620.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_008919621.1 COG0829 Urease accessory protein UreH YP_008919622.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_008919623.1 COG4674 Uncharacterized ABC-type transport system, ATPase component YP_008919624.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_008919625.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_008919626.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008919628.1 COG0642 Signal transduction histidine kinase YP_008919629.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008919630.1 COG3177 Uncharacterized conserved protein YP_008919631.1 COG4924 Uncharacterized protein conserved in bacteria YP_008919632.1 COG4913 Uncharacterized protein conserved in bacteria YP_008919634.1 COG0539 Ribosomal protein S1 YP_008919635.1 COG2378 Predicted transcriptional regulator YP_008919636.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008919637.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008919638.1 COG0732 Restriction endonuclease S subunits YP_008919639.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008919640.1 COG1643 HrpA-like helicases YP_008919641.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_008919642.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_008919643.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_008919644.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_008919645.1 COG2971 Predicted N-acetylglucosamine kinase YP_008919646.1 COG0583 Transcriptional regulator YP_008919647.1 COG1620 L-lactate permease YP_008919648.1 COG0618 Exopolyphosphatase-related proteins YP_008919649.1 COG0006 Xaa-Pro aminopeptidase YP_008919650.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008919652.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008919653.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008919654.1 COG0006 Xaa-Pro aminopeptidase YP_008919655.1 COG3079 Uncharacterized protein conserved in bacteria YP_008919656.1 COG0524 Sugar kinases, ribokinase family YP_008919657.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_008919658.1 COG2203 FOG: GAF domain YP_008919659.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_008919660.1 COG0120 Ribose 5-phosphate isomerase YP_008919661.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008919662.1 COG3137 Putative salt-induced outer membrane protein YP_008919663.1 COG3137 Putative salt-induced outer membrane protein YP_008919664.1 COG1639 Predicted signal transduction protein YP_008919665.1 COG3313 Predicted Fe-S protein YP_008919666.1 COG2859 Uncharacterized protein conserved in bacteria YP_008919667.1 COG0841 Cation/multidrug efflux pump YP_008919668.1 COG0845 Membrane-fusion protein YP_008919669.1 COG0583 Transcriptional regulator YP_008919671.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008919672.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008919673.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_008919674.1 COG2186 Transcriptional regulators YP_008919675.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008919676.1 COG3023 Negative regulator of beta-lactamase expression YP_008919677.1 COG3577 Predicted aspartyl protease YP_008919678.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_008919679.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_008919680.1 COG1459 Type II secretory pathway, component PulF YP_008919681.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_008919682.1 COG0237 Dephospho-CoA kinase YP_008919683.1 COG4582 Uncharacterized protein conserved in bacteria YP_008919684.1 COG3024 Uncharacterized protein conserved in bacteria YP_008919685.1 COG2988 Succinylglutamate desuccinylase YP_008919686.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008919687.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_008919688.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008919689.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_008919690.1 COG0206 Cell division GTPase YP_008919691.1 COG0849 Actin-like ATPase involved in cell division YP_008919692.1 COG1589 Cell division septal protein YP_008919693.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_008919694.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008919695.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_008919696.1 COG0772 Bacterial cell division membrane protein YP_008919697.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_008919698.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008919699.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_008919700.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_008919701.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008919702.1 COG3116 Cell division protein YP_008919703.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_008919704.1 COG2001 Uncharacterized protein conserved in bacteria YP_008919707.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_008919708.1 COG3696 Putative silver efflux pump YP_008919712.1 COG2267 Lysophospholipase YP_008919713.1 COG0678 Peroxiredoxin YP_008919714.1 COG1192 ATPases involved in chromosome partitioning YP_008919715.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008919716.1 COG2199 FOG: GGDEF domain YP_008919717.1 COG3791 Uncharacterized conserved protein YP_008919718.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008919719.1 COG0642 Signal transduction histidine kinase YP_008919720.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008919723.1 COG3391 Uncharacterized conserved protein YP_008919724.1 COG0501 Zn-dependent protease with chaperone function YP_008919725.1 COG0668 Small-conductance mechanosensitive channel YP_008919726.1 COG1385 Uncharacterized protein conserved in bacteria YP_008919727.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008919728.1 COG1678 Putative transcriptional regulator YP_008919729.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_008919731.1 COG5008 Tfp pilus assembly protein, ATPase PilU YP_008919732.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_008919733.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_008919734.1 COG0345 Pyrroline-5-carboxylate reductase YP_008919735.1 COG0762 Predicted integral membrane protein YP_008919737.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008919738.1 COG0346 Lactoylglutathione lyase and related lyases YP_008919739.1 COG4805 Uncharacterized protein conserved in bacteria YP_008919740.1 COG0625 Glutathione S-transferase YP_008919741.1 COG2032 Cu/Zn superoxide dismutase YP_008919742.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008919743.1 COG0225 Peptide methionine sulfoxide reductase YP_008919744.1 COG2323 Predicted membrane protein YP_008919746.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_008919747.1 COG1396 Predicted transcriptional regulators YP_008919748.1 COG2814 Arabinose efflux permease YP_008919749.1 COG0724 RNA-binding proteins (RRM domain) YP_008919750.1 COG3022 Uncharacterized protein conserved in bacteria YP_008919752.1 COG0176 Transaldolase YP_008919753.1 COG0166 Glucose-6-phosphate isomerase YP_008919755.1 COG0692 Uracil DNA glycosylase YP_008919756.1 COG0498 Threonine synthase YP_008919757.1 COG0083 Homoserine kinase YP_008919758.1 COG0527 Aspartokinases YP_008919759.1 COG0178 Excinuclease ATPase subunit YP_008919760.1 COG0583 Transcriptional regulator YP_008919761.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_008919763.1 COG0640 Predicted transcriptional regulators YP_008919764.1 COG0394 Protein-tyrosine-phosphatase YP_008919765.1 COG0431 Predicted flavoprotein YP_008919766.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_008919767.1 COG0784 FOG: CheY-like receiver YP_008919768.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_008919769.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008919770.1 COG0642 Signal transduction histidine kinase YP_008919773.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_008919775.1 COG1816 Adenosine deaminase YP_008919776.1 COG3000 Sterol desaturase YP_008919778.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008919780.1 COG1748 Saccharopine dehydrogenase and related proteins YP_008919781.1 COG0019 Diaminopimelate decarboxylase YP_008919783.1 COG0313 Predicted methyltransferases YP_008919784.1 COG3107 Putative lipoprotein YP_008919785.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_008919786.1 COG0438 Glycosyltransferase YP_008919787.1 COG0279 Phosphoheptose isomerase YP_008919788.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008919789.1 COG0477 Permeases of the major facilitator superfamily YP_008919791.1 COG2076 Membrane transporters of cations and cationic drugs YP_008919792.1 COG4585 Signal transduction histidine kinase YP_008919793.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008919796.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919797.1 COG1802 Transcriptional regulators YP_008919798.1 COG2513 PEP phosphonomutase and related enzymes YP_008919799.1 COG0372 Citrate synthase YP_008919800.1 COG1048 Aconitase A YP_008919801.1 COG2828 Uncharacterized protein conserved in bacteria YP_008919802.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008919803.1 COG0591 Na+/proline symporter YP_008919804.1 COG3428 Predicted membrane protein YP_008919805.1 COG3402 Uncharacterized conserved protein YP_008919806.1 COG0642 Signal transduction histidine kinase YP_008919807.1 COG3023 Negative regulator of beta-lactamase expression YP_008919808.1 COG0067 Glutamate synthase domain 1 YP_008919809.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008919812.1 COG0775 Nucleoside phosphorylase YP_008919813.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008919814.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008919815.1 COG0607 Rhodanese-related sulfurtransferase YP_008919817.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008919818.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008919819.1 COG0162 Tyrosyl-tRNA synthetase YP_008919821.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008919822.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_008919823.1 COG0738 Fucose permease YP_008919824.1 COG3659 Carbohydrate-selective porin YP_008919825.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008919826.1 COG3832 Uncharacterized conserved protein YP_008919827.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008919828.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008919829.1 COG0625 Glutathione S-transferase YP_008919830.1 COG0316 Uncharacterized conserved protein YP_008919832.1 COG2326 Uncharacterized conserved protein YP_008919833.1 COG0851 Septum formation topological specificity factor YP_008919834.1 COG2894 Septum formation inhibitor-activating ATPase YP_008919835.1 COG0850 Septum formation inhibitor YP_008919836.1 COG0114 Fumarase YP_008919837.1 COG3241 Azurin YP_008919839.1 COG0038 Chloride channel protein EriC YP_008919840.1 COG1981 Predicted membrane protein YP_008919843.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008919844.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008919845.1 COG0784 FOG: CheY-like receiver YP_008919846.1 COG1217 Predicted membrane GTPase involved in stress response YP_008919848.1 COG0174 Glutamine synthetase YP_008919850.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_008919851.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008919852.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008919853.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008919854.1 COG3076 Uncharacterized protein conserved in bacteria YP_008919856.1 COG4877 Uncharacterized protein conserved in bacteria YP_008919857.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008919858.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008919859.1 COG0642 Signal transduction histidine kinase YP_008919860.1 COG0525 Valyl-tRNA synthetase YP_008919861.1 COG2927 DNA polymerase III, chi subunit YP_008919862.1 COG0260 Leucyl aminopeptidase YP_008919863.1 COG0795 Predicted permeases YP_008919864.1 COG0795 Predicted permeases YP_008919865.1 COG1714 Predicted membrane protein/domain YP_008919866.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919867.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008919868.1 COG5343 Uncharacterized protein conserved in bacteria YP_008919870.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008919874.1 COG0338 Site-specific DNA methylase YP_008919875.1 COG3436 Transposase and inactivated derivatives YP_008919876.1 COG2801 Transposase and inactivated derivatives YP_008919877.1 COG1396 Predicted transcriptional regulators YP_008919878.1 COG2405 Predicted nucleic acid-binding protein, contains PIN domain YP_008919879.1 COG0582 Integrase YP_008919882.1 COG3839 ABC-type sugar transport systems, ATPase components YP_008919885.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_008919888.1 COG3668 Plasmid stabilization system protein YP_008919889.1 COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_008919891.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008919892.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008919893.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008919894.1 COG1397 ADP-ribosylglycohydrolase YP_008919895.1 COG0673 Predicted dehydrogenases and related proteins YP_008919896.1 COG0628 Predicted permease YP_008919898.1 COG0748 Putative heme iron utilization protein YP_008919899.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008919900.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008919901.1 COG4558 ABC-type hemin transport system, periplasmic component YP_008919903.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008919905.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_008919906.1 COG0149 Triosephosphate isomerase YP_008919907.1 COG0158 Fructose-1,6-bisphosphatase YP_008919908.1 COG0158 Fructose-1,6-bisphosphatase YP_008919909.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008919910.1 COG0554 Glycerol kinase YP_008919911.1 COG3839 ABC-type sugar transport systems, ATPase components YP_008919912.1 COG1733 Predicted transcriptional regulators YP_008919913.1 COG2128 Uncharacterized conserved protein YP_008919914.1 COG3436 Transposase and inactivated derivatives YP_008919915.1 COG3436 Transposase and inactivated derivatives YP_008919918.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_008919919.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008919921.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919922.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919926.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008919927.1 COG0397 Uncharacterized conserved protein YP_008919928.1 COG0006 Xaa-Pro aminopeptidase YP_008919929.1 COG0499 S-adenosylhomocysteine hydrolase YP_008919930.1 COG2199 FOG: GGDEF domain YP_008919931.1 COG0679 Predicted permeases YP_008919932.1 COG2010 Cytochrome c, mono- and diheme variants YP_008919934.1 COG4993 Glucose dehydrogenase YP_008919935.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008919937.1 COG3391 Uncharacterized conserved protein YP_008919938.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008919939.1 COG0842 ABC-type multidrug transport system, permease component YP_008919940.1 COG0260 Leucyl aminopeptidase YP_008919941.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_008919942.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_008919944.1 COG0535 Predicted Fe-S oxidoreductases YP_008919945.1 COG1026 Predicted Zn-dependent peptidases, insulinase-like YP_008919946.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919949.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008919950.1 COG0642 Signal transduction histidine kinase YP_008919951.1 COG3287 Uncharacterized conserved protein YP_008919952.1 COG3901 Regulator of nitric oxide reductase transcription YP_008919953.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008919954.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008919955.1 COG4585 Signal transduction histidine kinase YP_008919956.1 COG0583 Transcriptional regulator YP_008919957.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008919958.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008919959.1 COG1292 Choline-glycine betaine transporter YP_008919960.1 COG0277 FAD/FMN-containing dehydrogenases YP_008919961.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008919962.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_008919964.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_008919967.1 COG1404 Subtilisin-like serine proteases YP_008919968.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008919969.1 COG3971 2-keto-4-pentenoate hydratase YP_008919970.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_008919971.1 COG0513 Superfamily II DNA and RNA helicases YP_008919972.1 COG2199 FOG: GGDEF domain YP_008919975.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008919976.1 COG0524 Sugar kinases, ribokinase family YP_008919978.1 COG2186 Transcriptional regulators YP_008919979.1 COG3264 Small-conductance mechanosensitive channel YP_008919981.1 COG0376 Catalase (peroxidase I) YP_008919983.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008919984.1 COG3568 Metal-dependent hydrolase YP_008919985.1 COG0583 Transcriptional regulator YP_008919986.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008919987.1 COG0730 Predicted permeases YP_008919988.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008919989.1 COG0784 FOG: CheY-like receiver YP_008919990.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_008919991.1 COG0642 Signal transduction histidine kinase YP_008919992.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008919993.1 COG0417 DNA polymerase elongation subunit (family B) YP_008919995.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008919996.1 COG0724 RNA-binding proteins (RRM domain) YP_008919998.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008919999.1 COG1309 Transcriptional regulator YP_008920000.1 COG1398 Fatty-acid desaturase YP_008920001.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008920003.1 COG1573 Uracil-DNA glycosylase YP_008920004.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008920006.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008920007.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_008920008.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_008920010.1 COG5345 Uncharacterized protein conserved in bacteria YP_008920012.1 COG1983 Putative stress-responsive transcriptional regulator YP_008920013.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008920015.1 COG0042 tRNA-dihydrouridine synthase YP_008920018.1 COG1196 Chromosome segregation ATPases YP_008920019.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008920020.1 COG1100 GTPase SAR1 and related small G proteins YP_008920021.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008920022.1 COG0627 Predicted esterase YP_008920023.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008920024.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008920025.1 COG0668 Small-conductance mechanosensitive channel YP_008920028.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008920029.1 COG0733 Na+-dependent transporters of the SNF family YP_008920030.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008920031.1 COG3011 Uncharacterized protein conserved in bacteria YP_008920032.1 COG0225 Peptide methionine sulfoxide reductase YP_008920035.1 COG0716 Flavodoxins YP_008920037.1 COG0848 Biopolymer transport protein YP_008920038.1 COG0587 DNA polymerase III, alpha subunit YP_008920040.1 COG0457 FOG: TPR repeat YP_008920041.1 COG3405 Endoglucanase Y YP_008920042.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_008920045.1 COG4123 Predicted O-methyltransferase YP_008920046.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008920047.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008920049.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008920051.1 COG1171 Threonine dehydratase YP_008920052.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008920053.1 COG0531 Amino acid transporters YP_008920054.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008920055.1 COG0346 Lactoylglutathione lyase and related lyases YP_008920056.1 COG0583 Transcriptional regulator YP_008920057.1 COG0121 Predicted glutamine amidotransferase YP_008920058.1 COG4682 Predicted membrane protein YP_008920059.1 COG4727 Uncharacterized protein conserved in bacteria YP_008920062.1 COG1953 Cytosine/uracil/thiamine/allantoin permeases YP_008920063.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920064.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008920065.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008920066.1 COG0778 Nitroreductase YP_008920067.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008920068.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008920069.1 COG1335 Amidases related to nicotinamidase YP_008920070.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008920071.1 COG1309 Transcriptional regulator YP_008920072.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008920073.1 COG3000 Sterol desaturase YP_008920074.1 COG4628 Uncharacterized conserved protein YP_008920075.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920076.1 COG1626 Neutral trehalase YP_008920077.1 COG2610 H+/gluconate symporter and related permeases YP_008920078.1 COG3265 Gluconate kinase YP_008920079.1 COG1609 Transcriptional regulators YP_008920080.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008920081.1 COG4728 Uncharacterized protein conserved in bacteria YP_008920082.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008920083.1 COG2991 Uncharacterized protein conserved in bacteria YP_008920084.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_008920085.1 COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_008920086.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_008920087.1 COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_008920088.1 COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_008920089.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_008920090.1 COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_008920091.1 COG3007 Uncharacterized paraquat-inducible protein B YP_008920092.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008920093.1 COG2352 Phosphoenolpyruvate carboxylase YP_008920094.1 COG0376 Catalase (peroxidase I) YP_008920095.1 COG0376 Catalase (peroxidase I) YP_008920097.1 COG0039 Malate/lactate dehydrogenases YP_008920098.1 COG1438 Arginine repressor YP_008920099.1 COG0693 Putative intracellular protease/amidase YP_008920100.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920103.1 COG0572 Uridine kinase YP_008920104.1 COG1972 Nucleoside permease YP_008920105.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_008920106.1 COG0457 FOG: TPR repeat YP_008920108.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008920109.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008920110.1 COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains YP_008920111.1 COG4147 Predicted symporter YP_008920112.1 COG4327 Predicted membrane protein YP_008920113.1 COG0591 Na+/proline symporter YP_008920114.1 COG0668 Small-conductance mechanosensitive channel YP_008920115.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008920116.1 COG3608 Predicted deacylase YP_008920117.1 COG4067 Uncharacterized protein conserved in archaea YP_008920119.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008920120.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008920121.1 COG2238 Ribosomal protein S19E (S16A) YP_008920122.1 COG1283 Na+/phosphate symporter YP_008920123.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008920124.1 COG0481 Membrane GTPase LepA YP_008920126.1 COG3211 Predicted phosphatase YP_008920127.1 COG2202 FOG: PAS/PAC domain YP_008920129.1 COG0050 GTPases - translation elongation factors YP_008920130.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_008920131.1 COG1654 Biotin operon repressor YP_008920132.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008920133.1 COG0840 Methyl-accepting chemotaxis protein YP_008920135.1 COG1538 Outer membrane protein YP_008920136.1 COG0845 Membrane-fusion protein YP_008920137.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008920138.1 COG0583 Transcriptional regulator YP_008920139.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_008920140.1 COG3744 Uncharacterized protein conserved in bacteria YP_008920141.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_008920142.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_008920143.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_008920144.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_008920145.1 COG1209 dTDP-glucose pyrophosphorylase YP_008920147.1 COG0438 Glycosyltransferase YP_008920149.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008920150.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008920152.1 COG1404 Subtilisin-like serine proteases YP_008920156.1 COG1089 GDP-D-mannose dehydratase YP_008920157.1 COG0546 Predicted phosphatases YP_008920158.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008920159.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008920161.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008920162.1 COG0172 Seryl-tRNA synthetase YP_008920166.1 COG3774 Mannosyltransferase OCH1 and related enzymes YP_008920170.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008920172.1 COG0457 FOG: TPR repeat YP_008920173.1 COG1520 FOG: WD40-like repeat YP_008920176.1 COG1216 Predicted glycosyltransferases YP_008920177.1 COG1216 Predicted glycosyltransferases YP_008920178.1 COG0438 Glycosyltransferase YP_008920181.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008920182.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008920183.1 COG0546 Predicted phosphatases YP_008920186.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008920188.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008920189.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008920190.1 COG1109 Phosphomannomutase YP_008920191.1 COG1344 Flagellin and related hook-associated proteins YP_008920192.1 COG4115 Uncharacterized protein conserved in bacteria YP_008920193.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_008920194.1 COG0203 Ribosomal protein L17 YP_008920195.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_008920196.1 COG0522 Ribosomal protein S4 and related proteins YP_008920197.1 COG0100 Ribosomal protein S11 YP_008920198.1 COG0099 Ribosomal protein S13 YP_008920199.1 COG0257 Ribosomal protein L36 YP_008920200.1 COG0201 Preprotein translocase subunit SecY YP_008920201.1 COG0200 Ribosomal protein L15 YP_008920202.1 COG1841 Ribosomal protein L30/L7E YP_008920203.1 COG0098 Ribosomal protein S5 YP_008920204.1 COG0256 Ribosomal protein L18 YP_008920205.1 COG0097 Ribosomal protein L6P/L9E YP_008920206.1 COG0096 Ribosomal protein S8 YP_008920207.1 COG0199 Ribosomal protein S14 YP_008920208.1 COG0094 Ribosomal protein L5 YP_008920209.1 COG0198 Ribosomal protein L24 YP_008920210.1 COG0093 Ribosomal protein L14 YP_008920211.1 COG0642 Signal transduction histidine kinase YP_008920213.1 COG1404 Subtilisin-like serine proteases YP_008920214.1 COG0457 FOG: TPR repeat YP_008920215.1 COG0566 rRNA methylases YP_008920216.1 COG0557 Exoribonuclease R YP_008920217.1 COG3093 Plasmid maintenance system antidote protein YP_008920219.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_008920220.1 COG3668 Plasmid stabilization system protein YP_008920221.1 COG3905 Predicted transcriptional regulator YP_008920222.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920223.1 COG5591 Uncharacterized conserved protein YP_008920224.1 COG3658 Cytochrome b YP_008920225.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008920227.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_008920228.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_008920229.1 COG5611 Predicted nucleic-acid-binding protein, contains PIN domain YP_008920230.1 COG2002 Regulators of stationary/sporulation gene expression YP_008920231.1 COG2234 Predicted aminopeptidases YP_008920232.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008920233.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_008920234.1 COG1510 Predicted transcriptional regulators YP_008920235.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008920236.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008920237.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008920238.1 COG1522 Transcriptional regulators YP_008920240.1 COG1278 Cold shock proteins YP_008920241.1 COG0661 Predicted unusual protein kinase YP_008920242.1 COG3165 Uncharacterized protein conserved in bacteria YP_008920243.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008920244.1 COG2818 3-methyladenine DNA glycosylase YP_008920245.1 COG0339 Zn-dependent oligopeptidases YP_008920246.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008920247.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008920248.1 COG0642 Signal transduction histidine kinase YP_008920249.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008920250.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008920251.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008920252.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008920255.1 COG0457 FOG: TPR repeat YP_008920256.1 COG1262 Uncharacterized conserved protein YP_008920261.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_008920262.1 COG0845 Membrane-fusion protein YP_008920263.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008920264.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008920266.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008920267.1 COG2002 Regulators of stationary/sporulation gene expression YP_008920269.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_008920270.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_008920271.1 COG3087 Cell division protein YP_008920272.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_008920273.1 COG0254 Ribosomal protein L31 YP_008920275.1 COG0281 Malic enzyme YP_008920276.1 COG3060 Transcriptional regulator of met regulon YP_008920277.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_008920278.1 COG1295 Predicted membrane protein YP_008920281.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008920282.1 COG1490 D-Tyr-tRNAtyr deacylase YP_008920283.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008920284.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008920285.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008920286.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008920287.1 COG2177 Cell division protein YP_008920288.1 COG2884 Predicted ATPase involved in cell division YP_008920289.1 COG0552 Signal recognition particle GTPase YP_008920290.1 COG0742 N6-adenine-specific methylase YP_008920291.1 COG3068 Uncharacterized protein conserved in bacteria YP_008920292.1 COG2095 Multiple antibiotic transporter YP_008920294.1 COG0260 Leucyl aminopeptidase YP_008920295.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_008920296.1 COG1734 DnaK suppressor protein YP_008920297.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008920298.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008920299.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008920300.1 COG0413 Ketopantoate hydroxymethyltransferase YP_008920301.1 COG0414 Panthothenate synthetase YP_008920302.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_008920303.1 COG2200 FOG: EAL domain YP_008920304.1 COG0500 SAM-dependent methyltransferases YP_008920305.1 COG0842 ABC-type multidrug transport system, permease component YP_008920306.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008920307.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008920308.1 COG0642 Signal transduction histidine kinase YP_008920309.1 COG4774 Outer membrane receptor for monomeric catechols YP_008920310.1 COG3128 Uncharacterized iron-regulated protein YP_008920311.1 COG3794 Plastocyanin YP_008920312.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008920313.1 COG1253 Hemolysins and related proteins containing CBS domains YP_008920314.1 COG0701 Predicted permeases YP_008920315.1 COG1966 Carbon starvation protein, predicted membrane protein YP_008920316.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008920317.1 COG0657 Esterase/lipase YP_008920318.1 COG3735 Uncharacterized protein conserved in bacteria YP_008920319.1 COG0050 GTPases - translation elongation factors YP_008920320.1 COG0480 Translation elongation factors (GTPases) YP_008920321.1 COG0049 Ribosomal protein S7 YP_008920322.1 COG0048 Ribosomal protein S12 YP_008920323.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_008920324.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_008920325.1 COG0222 Ribosomal protein L7/L12 YP_008920326.1 COG0244 Ribosomal protein L10 YP_008920327.1 COG0081 Ribosomal protein L1 YP_008920328.1 COG0080 Ribosomal protein L11 YP_008920332.1 COG0250 Transcription antiterminator YP_008920333.1 COG0690 Preprotein translocase subunit SecE YP_008920334.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008920335.1 COG0684 Demethylmenaquinone methyltransferase YP_008920336.1 COG3590 Predicted metalloendopeptidase YP_008920337.1 COG3602 Uncharacterized protein conserved in bacteria YP_008920338.1 COG0513 Superfamily II DNA and RNA helicases YP_008920339.1 COG0418 Dihydroorotase YP_008920340.1 COG3040 Bacterial lipocalin YP_008920341.1 COG4989 Predicted oxidoreductase YP_008920342.1 COG0346 Lactoylglutathione lyase and related lyases YP_008920343.1 COG0668 Small-conductance mechanosensitive channel YP_008920344.1 COG0738 Fucose permease YP_008920345.1 COG0366 Glycosidases YP_008920347.1 COG0302 GTP cyclohydrolase I YP_008920348.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008920349.1 COG2957 Peptidylarginine deiminase and related enzymes YP_008920350.1 COG0388 Predicted amidohydrolase YP_008920351.1 COG1407 Predicted ICC-like phosphoesterases YP_008920352.1 COG1201 Lhr-like helicases YP_008920353.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_008920354.1 COG1793 ATP-dependent DNA ligase YP_008920355.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008920356.1 COG0524 Sugar kinases, ribokinase family YP_008920357.1 COG1940 Transcriptional regulator/sugar kinase YP_008920358.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_008920359.1 COG0625 Glutathione S-transferase YP_008920360.1 COG0625 Glutathione S-transferase YP_008920362.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008920363.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008920364.1 COG3651 Uncharacterized protein conserved in bacteria YP_008920365.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008920366.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008920368.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_008920369.1 COG2978 Putative p-aminobenzoyl-glutamate transporter YP_008920370.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008920371.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008920372.1 COG2262 GTPases YP_008920373.1 COG1923 Uncharacterized host factor I protein YP_008920374.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008920375.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_008920376.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_008920377.1 COG0802 Predicted ATPase or kinase YP_008920378.1 COG0062 Uncharacterized conserved protein YP_008920379.1 COG1600 Uncharacterized Fe-S protein YP_008920381.1 COG0407 Uroporphyrinogen-III decarboxylase YP_008920382.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_008920383.1 COG3160 Regulator of sigma D YP_008920384.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008920385.1 COG1406 Predicted inhibitor of MCP methylation, homolog of CheC YP_008920386.1 COG0432 Uncharacterized conserved protein YP_008920387.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008920388.1 COG0305 Replicative DNA helicase YP_008920390.1 COG3595 Uncharacterized conserved protein YP_008920392.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008920393.1 COG2258 Uncharacterized protein conserved in bacteria YP_008920395.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_008920396.1 COG0359 Ribosomal protein L9 YP_008920397.1 COG0238 Ribosomal protein S18 YP_008920398.1 COG0360 Ribosomal protein S6 YP_008920399.1 COG0642 Signal transduction histidine kinase YP_008920400.1 COG3141 Uncharacterized protein conserved in bacteria YP_008920401.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008920402.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008920403.1 COG2202 FOG: PAS/PAC domain YP_008920404.1 COG0642 Signal transduction histidine kinase YP_008920405.1 COG0840 Methyl-accepting chemotaxis protein YP_008920407.1 COG1230 Co/Zn/Cd efflux system component YP_008920408.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_008920409.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920410.1 COG1757 Na+/H+ antiporter YP_008920411.1 COG1472 Beta-glucosidase-related glycosidases YP_008920412.1 COG0738 Fucose permease YP_008920413.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008920414.1 COG1609 Transcriptional regulators YP_008920415.1 COG0477 Permeases of the major facilitator superfamily YP_008920416.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008920417.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008920418.1 COG4890 Predicted outer membrane lipoprotein YP_008920419.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008920420.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008920422.1 COG2202 FOG: PAS/PAC domain YP_008920424.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920425.1 COG0730 Predicted permeases YP_008920427.1 COG4319 Ketosteroid isomerase homolog YP_008920428.1 COG2503 Predicted secreted acid phosphatase YP_008920429.1 COG2199 FOG: GGDEF domain YP_008920430.1 COG0477 Permeases of the major facilitator superfamily YP_008920431.1 COG2375 Siderophore-interacting protein YP_008920432.1 COG3237 Uncharacterized protein conserved in bacteria YP_008920438.1 COG1186 Protein chain release factor B YP_008920439.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008920441.1 COG0517 FOG: CBS domain YP_008920443.1 COG3038 Cytochrome B561 YP_008920444.1 COG2353 Uncharacterized conserved protein YP_008920445.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_008920446.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920448.1 COG0583 Transcriptional regulator YP_008920449.1 COG2067 Long-chain fatty acid transport protein YP_008920450.1 COG2130 Putative NADP-dependent oxidoreductases YP_008920451.1 COG2199 FOG: GGDEF domain YP_008920452.1 COG0642 Signal transduction histidine kinase YP_008920453.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_008920454.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008920455.1 COG0695 Glutaredoxin and related proteins YP_008920456.1 COG3544 Uncharacterized protein conserved in bacteria YP_008920457.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008920459.1 COG1276 Putative copper export protein YP_008920460.1 COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC YP_008920461.1 COG3696 Putative silver efflux pump YP_008920462.1 COG0845 Membrane-fusion protein YP_008920463.1 COG1538 Outer membrane protein YP_008920464.1 COG3019 Predicted metal-binding protein YP_008920466.1 COG0701 Predicted permeases YP_008920467.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_008920468.1 COG3696 Putative silver efflux pump YP_008920469.1 COG0845 Membrane-fusion protein YP_008920470.1 COG1538 Outer membrane protein YP_008920472.1 COG1230 Co/Zn/Cd efflux system component YP_008920474.1 COG1230 Co/Zn/Cd efflux system component YP_008920475.1 COG0789 Predicted transcriptional regulators YP_008920476.1 COG2608 Copper chaperone YP_008920477.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008920478.1 COG2801 Transposase and inactivated derivatives YP_008920479.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_008920480.1 COG1349 Transcriptional regulators of sugar metabolism YP_008920481.1 COG0673 Predicted dehydrogenases and related proteins YP_008920482.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_008920483.1 COG2199 FOG: GGDEF domain YP_008920484.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008920485.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008920486.1 COG2169 Adenosine deaminase YP_008920487.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008920488.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_008920490.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_008920491.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008920492.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008920493.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920497.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920498.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008920499.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_008920501.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008920503.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008920504.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_008920505.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008920506.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008920507.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008920509.1 COG4456 Virulence-associated protein and related proteins YP_008920510.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_008920511.1 COG0582 Integrase YP_008920514.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008920515.1 COG0234 Co-chaperonin GroES (HSP10) YP_008920516.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_008920517.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_008920518.1 COG4232 Thiol:disulfide interchange protein YP_008920519.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008920520.1 COG0757 3-dehydroquinate dehydratase II YP_008920521.1 COG0511 Biotin carboxyl carrier protein YP_008920522.1 COG0439 Biotin carboxylase YP_008920526.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008920527.1 COG1403 Restriction endonuclease YP_008920529.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_008920531.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008920532.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008920533.1 COG2264 Ribosomal protein L11 methylase YP_008920534.1 COG0042 tRNA-dihydrouridine synthase YP_008920535.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_008920536.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_008920537.1 COG4798 Predicted methyltransferase YP_008920538.1 COG0151 Phosphoribosylamine-glycine ligase YP_008920539.1 COG2992 Uncharacterized FlgJ-related protein YP_008920541.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008920542.1 COG3954 Phosphoribulokinase YP_008920544.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008920546.1 COG0642 Signal transduction histidine kinase YP_008920547.1 COG0477 Permeases of the major facilitator superfamily YP_008920548.1 COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases YP_008920549.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_008920550.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_008920551.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_008920552.1 COG3031 Type II secretory pathway, component PulC YP_008920553.1 COG1450 Type II secretory pathway, component PulD YP_008920554.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008920555.1 COG1459 Type II secretory pathway, component PulF YP_008920556.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008920557.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008920558.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008920559.1 COG4795 Type II secretory pathway, component PulJ YP_008920560.1 COG3156 Type II secretory pathway, component PulK YP_008920561.1 COG3297 Type II secretory pathway, component PulL YP_008920562.1 COG3149 Type II secretory pathway, component PulM YP_008920564.1 COG5339 Uncharacterized protein conserved in bacteria YP_008920565.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008920566.1 COG1986 Uncharacterized conserved protein YP_008920567.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008920568.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008920569.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008920570.1 COG2353 Uncharacterized conserved protein YP_008920571.1 COG2943 Membrane glycosyltransferase YP_008920572.1 COG3131 Periplasmic glucans biosynthesis protein YP_008920574.1 COG3089 Uncharacterized protein conserved in bacteria YP_008920575.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008920576.1 COG5589 Uncharacterized conserved protein YP_008920577.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008920578.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_008920581.1 COG2900 Uncharacterized protein conserved in bacteria YP_008920582.1 COG2319 FOG: WD40 repeat YP_008920583.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008920585.1 COG0782 Transcription elongation factor YP_008920586.1 COG2183 Transcriptional accessory protein YP_008920587.1 COG4870 Cysteine protease YP_008920590.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008920591.1 COG1040 Predicted amidophosphoribosyltransferases YP_008920593.1 COG0316 Uncharacterized conserved protein YP_008920595.1 COG1794 Aspartate racemase YP_008920596.1 COG0346 Lactoylglutathione lyase and related lyases YP_008920597.1 COG0534 Na+-driven multidrug efflux pump YP_008920598.1 COG0726 Predicted xylanase/chitin deacetylase YP_008920599.1 COG0456 Acetyltransferases YP_008920600.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_008920601.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008920602.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_008920604.1 COG3346 Uncharacterized conserved protein YP_008920606.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008920607.1 COG3175 Cytochrome oxidase assembly factor YP_008920608.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008920609.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008920610.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008920611.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_008920612.1 COG1171 Threonine dehydratase YP_008920613.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008920614.1 COG2860 Predicted membrane protein YP_008920615.1 COG0606 Predicted ATPase with chaperone activity YP_008920616.1 COG0583 Transcriptional regulator YP_008920617.1 COG0059 Ketol-acid reductoisomerase YP_008920618.1 COG0477 Permeases of the major facilitator superfamily YP_008920619.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_008920620.1 COG0729 Outer membrane protein YP_008920621.1 COG2911 Uncharacterized protein conserved in bacteria YP_008920623.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008920625.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008920626.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008920627.1 COG0824 Predicted thioesterase YP_008920628.1 COG0263 Glutamate 5-kinase YP_008920629.1 COG0308 Aminopeptidase N YP_008920632.1 COG0661 Predicted unusual protein kinase YP_008920636.1 COG3816 Uncharacterized protein conserved in bacteria YP_008920637.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008920638.1 COG1238 Predicted membrane protein YP_008920642.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_008920643.1 COG0461 Orotate phosphoribosyltransferase YP_008920644.1 COG0689 RNase PH YP_008920646.1 COG1561 Uncharacterized stress-induced protein YP_008920647.1 COG0582 Integrase YP_008920648.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008920649.1 COG1396 Predicted transcriptional regulators YP_008920650.1 COG4680 Uncharacterized protein conserved in bacteria YP_008920651.1 COG5499 Predicted transcription regulator containing HTH domain YP_008920652.1 COG4951 Uncharacterized protein conserved in bacteria YP_008920654.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008920655.1 COG4123 Predicted O-methyltransferase YP_008920656.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008920657.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008920658.1 COG2909 ATP-dependent transcriptional regulator YP_008920659.1 COG3119 Arylsulfatase A and related enzymes YP_008920660.1 COG0714 MoxR-like ATPases YP_008920661.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008920663.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008920664.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008920666.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008920667.1 COG2303 Choline dehydrogenase and related flavoproteins YP_008920668.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008920669.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008920670.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_008920671.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008920672.1 COG1960 Acyl-CoA dehydrogenases YP_008920673.1 COG0183 Acetyl-CoA acetyltransferase YP_008920674.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008920675.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008920676.1 COG2801 Transposase and inactivated derivatives YP_008920677.1 COG2963 Transposase and inactivated derivatives YP_008920678.1 COG0500 SAM-dependent methyltransferases YP_008920679.1 COG0379 Quinolinate synthase YP_008920680.1 COG0837 Glucokinase YP_008920681.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008920682.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008920683.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_008920684.1 COG1737 Transcriptional regulators YP_008920685.1 COG0469 Pyruvate kinase YP_008920686.1 COG0775 Nucleoside phosphorylase YP_008920688.1 COG1396 Predicted transcriptional regulators YP_008920689.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_008920691.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008920692.1 COG1396 Predicted transcriptional regulators YP_008920693.1 COG3177 Uncharacterized conserved protein YP_008920694.1 COG1484 DNA replication protein YP_008920695.1 COG1291 Flagellar motor component YP_008920696.1 COG0716 Flavodoxins YP_008920697.1 COG0486 Predicted GTPase YP_008920698.1 COG1666 Uncharacterized protein conserved in bacteria YP_008920699.1 COG0706 Preprotein translocase subunit YidC YP_008920700.1 COG0759 Uncharacterized conserved protein YP_008920701.1 COG0594 RNase P protein component