-- dump date 20140618_185106 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002218470.1 198282149 6878909 252..1610 1 NC_011206.1 KEGG: hha:Hhal_1227 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase; chromosomal replication initiator protein DnaA 1610 6878909 Lferr_0001 Acidithiobacillus ferrooxidans ATCC 53993 chromosomal replication initiator protein DnaA YP_002218470.1 252 D 380394 CDS YP_002218471.1 198282150 6875951 1894..2991 1 NC_011206.1 KEGG: pst:PSPTO_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2991 6875951 Lferr_0002 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit beta YP_002218471.1 1894 D 380394 CDS YP_002218472.1 198282151 6875952 2993..4045 1 NC_011206.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: aeh:Mlg_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF 4045 6875952 Lferr_0003 Acidithiobacillus ferrooxidans ATCC 53993 DNA replication and repair protein RecF YP_002218472.1 2993 D 380394 CDS YP_002218473.1 198282152 6875953 4042..6447 1 NC_011206.1 KEGG: lpc:LPC_0004 DNA gyrase, subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6447 6875953 Lferr_0004 Acidithiobacillus ferrooxidans ATCC 53993 DNA gyrase subunit B YP_002218473.1 4042 D 380394 CDS YP_002218474.1 198282153 6875954 6592..10098 1 NC_011206.1 KEGG: noc:Noc_1583 hypothetical protein; hypothetical protein 10098 6875954 Lferr_0005 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218474.1 6592 D 380394 CDS YP_002218475.1 198282154 6875955 10193..10705 1 NC_011206.1 PFAM: Spore coat U domain protein; KEGG: gbe:GbCGDNIH1_1327 protein U precursor; Spore coat U domain-containing protein 10705 6875955 Lferr_0006 Acidithiobacillus ferrooxidans ATCC 53993 Spore coat U domain-containing protein YP_002218475.1 10193 D 380394 CDS YP_002218476.1 198282155 6875956 10719..11462 1 NC_011206.1 KEGG: gbe:GbCGDNIH1_1328 chaperone protein EcpD; chaperone protein EcpD 11462 6875956 Lferr_0007 Acidithiobacillus ferrooxidans ATCC 53993 chaperone protein EcpD YP_002218476.1 10719 D 380394 CDS YP_002218477.1 198282156 6875957 11449..13872 1 NC_011206.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: gbe:GbCGDNIH1_1329 outer membrane usher protein SefC; fimbrial biogenesis outer membrane usher protein 13872 6875957 Lferr_0008 Acidithiobacillus ferrooxidans ATCC 53993 fimbrial biogenesis outer membrane usher protein YP_002218477.1 11449 D 380394 CDS YP_002218478.1 198282157 6875958 13869..14333 1 NC_011206.1 PFAM: Spore coat U domain protein; KEGG: gbe:GbCGDNIH1_1330 hypothetical secreted protein; Spore coat U domain-containing protein 14333 6875958 Lferr_0009 Acidithiobacillus ferrooxidans ATCC 53993 Spore coat U domain-containing protein YP_002218478.1 13869 D 380394 CDS YP_002218479.1 198282158 6875959 complement(14356..14484) 1 NC_011206.1 PFAM: Septum formation topological specificity factor MinE; KEGG: bbr:BB4016 putative cell division topological specificity factor; Septum formation topological specificity factor MinE 14484 6875959 Lferr_0010 Acidithiobacillus ferrooxidans ATCC 53993 Septum formation topological specificity factor MinE YP_002218479.1 14356 R 380394 CDS YP_002218480.1 198282159 6875960 complement(14492..14926) 1 NC_011206.1 KEGG: gvi:glr1121 hypothetical protein; hypothetical protein 14926 6875960 Lferr_0011 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218480.1 14492 R 380394 CDS YP_002218481.1 198282160 6875961 complement(15259..15510) 1 NC_011206.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: rfr:Rfer_0034 cell division topological specificity factor MinE; cell division topological specificity factor MinE 15510 6875961 Lferr_0012 Acidithiobacillus ferrooxidans ATCC 53993 cell division topological specificity factor MinE YP_002218481.1 15259 R 380394 CDS YP_002218482.1 198282161 6875962 complement(15512..16321) 1 NC_011206.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cvi:CV_3376 septum site-determining protein MinD; septum site-determining protein MinD 16321 6875962 Lferr_0013 Acidithiobacillus ferrooxidans ATCC 53993 septum site-determining protein MinD YP_002218482.1 15512 R 380394 CDS YP_002218483.1 198282162 6875963 complement(16340..17071) 1 NC_011206.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: psa:PST_1425 septum site-determining protein MinC; septum site-determining protein MinC 17071 6875963 Lferr_0014 Acidithiobacillus ferrooxidans ATCC 53993 septum site-determining protein MinC YP_002218483.1 16340 R 380394 CDS YP_002218484.1 198282163 6875964 complement(17102..17428) 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hha:Hhal_1658 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 17428 6875964 Lferr_0015 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002218484.1 17102 R 380394 CDS YP_002218485.1 198282164 6875965 complement(17425..19980) 1 NC_011206.1 KEGG: mca:MCA2839 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I 19980 6875965 Lferr_0016 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase I YP_002218485.1 17425 R 380394 CDS YP_002218486.1 198282165 6875966 complement(19984..20424) 1 NC_011206.1 PFAM: protein of unknown function DUF494; KEGG: aeh:Mlg_2631 protein of unknown function DUF494; hypothetical protein 20424 6875966 Lferr_0017 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218486.1 19984 R 380394 CDS YP_002218487.1 198282166 6875967 complement(20434..21531) 1 NC_011206.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: azo:azo0097 putative DNA processing protein DrpA; DNA protecting protein DprA 21531 6875967 Lferr_0018 Acidithiobacillus ferrooxidans ATCC 53993 DNA protecting protein DprA YP_002218487.1 20434 R 380394 CDS YP_002218488.1 198282167 6875968 complement(21528..22577) 1 NC_011206.1 PFAM: Peptidoglycan-binding LysM; KEGG: pau:PA14_00210 putative lysin domain; peptidoglycan-binding LysM 22577 6875968 Lferr_0019 Acidithiobacillus ferrooxidans ATCC 53993 peptidoglycan-binding LysM YP_002218488.1 21528 R 380394 CDS YP_002218489.1 198282168 6875969 22660..23163 1 NC_011206.1 KEGG: tbd:Tbd_0014 formylmethionine deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 23163 6875969 Lferr_0020 Acidithiobacillus ferrooxidans ATCC 53993 peptide deformylase YP_002218489.1 22660 D 380394 CDS YP_002218490.1 198282169 6875970 23156..24097 1 NC_011206.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: aeh:Mlg_2627 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 24097 6875970 Lferr_0021 Acidithiobacillus ferrooxidans ATCC 53993 methionyl-tRNA formyltransferase YP_002218490.1 23156 D 380394 CDS YP_002218491.1 198282170 6875971 24103..25398 1 NC_011206.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: pfl:PFL_0020 sun protein; sun protein 25398 6875971 Lferr_0022 Acidithiobacillus ferrooxidans ATCC 53993 sun protein YP_002218491.1 24103 D 380394 CDS YP_002218492.1 198282171 6875972 25389..25988 1 NC_011206.1 KEGG: mca:MCA2846 hypothetical protein; hypothetical protein 25988 6875972 Lferr_0023 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218492.1 25389 D 380394 CDS YP_002218493.1 198282172 6875973 25961..28171 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aeh:Mlg_2624 multi-sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 28171 6875973 Lferr_0024 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002218493.1 25961 D 380394 CDS YP_002218494.1 198282173 6875974 28193..29599 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: mca:MCA2848 nitrogen regulation protein NtrX, putative; two component sigma-54 specific Fis family transcriptional regulator 29599 6875974 Lferr_0025 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002218494.1 28193 D 380394 CDS YP_002218495.1 198282174 6875975 29596..29793 1 NC_011206.1 KEGG: amr:AM1_A0133 addiction module antitoxin, putative; hypothetical protein 29793 6875975 Lferr_0026 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218495.1 29596 D 380394 CDS YP_002218496.1 198282175 6875976 29747..29914 1 NC_011206.1 hypothetical protein 29914 6875976 Lferr_0027 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218496.1 29747 D 380394 CDS YP_002218497.1 198282176 6875977 30028..31521 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mmw:Mmwyl1_4418 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 31521 6875977 Lferr_0028 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002218497.1 30028 D 380394 CDS YP_002218498.1 198282177 6875978 31563..32930 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: gsu:GSU1320 sigma-54 dependent DNA-binding response regulator; two component sigma-54 specific Fis family transcriptional regulator 32930 6875978 Lferr_0029 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002218498.1 31563 D 380394 CDS YP_002218499.1 198282178 6875979 33353..34852 1 NC_011206.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sto:ST1164 hypothetical outer membrane protein; pyrrolo-quinoline quinone 34852 6875979 Lferr_0030 Acidithiobacillus ferrooxidans ATCC 53993 pyrrolo-quinoline quinone YP_002218499.1 33353 D 380394 CDS YP_002218500.1 198282179 6875980 34969..36327 1 NC_011206.1 KEGG: tbd:Tbd_1838 hypothetical protein; hypothetical protein 36327 6875980 Lferr_0031 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218500.1 34969 D 380394 CDS YP_002218501.1 198282180 6875981 complement(36399..37754) 1 NC_011206.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: noc:Noc_3086 tRNA modification GTPase TrmE; tRNA modification GTPase TrmE 37754 6875981 Lferr_0032 Acidithiobacillus ferrooxidans ATCC 53993 tRNA modification GTPase TrmE YP_002218501.1 36399 R 380394 CDS YP_002218502.1 198282181 6875982 complement(37792..39378) 1 NC_011206.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: noc:Noc_3087 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 39378 6875982 Lferr_0033 Acidithiobacillus ferrooxidans ATCC 53993 60 kDa inner membrane insertion protein YP_002218502.1 37792 R 380394 CDS YP_002218503.1 198282182 6875983 complement(39394..39609) 1 NC_011206.1 PFAM: protein of unknown function DUF37; KEGG: mmw:Mmwyl1_3004 protein of unknown function DUF37; hypothetical protein 39609 6875983 Lferr_0034 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218503.1 39394 R 380394 CDS YP_002218504.1 198282183 6875984 complement(39606..39956) 1 NC_011206.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: sfu:Sfum_2595 ribonuclease P protein component; ribonuclease P protein component 39956 6875984 Lferr_0035 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease P protein component YP_002218504.1 39606 R 380394 CDS YP_002218505.1 198282184 6875985 complement(39961..40095) 1 NC_011206.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 40095 rpmH 6875985 rpmH Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L34 YP_002218505.1 39961 R 380394 CDS YP_002218506.1 198282185 6875986 complement(40166..41833) 1 NC_011206.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 41833 6875986 Lferr_0037 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter ATP-binding protein YP_002218506.1 40166 R 380394 CDS YP_002218507.1 198282186 6875987 complement(41931..42833) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gvi:glr3360 LysR family transcriptional regulatory protein; LysR family transcriptional regulator 42833 6875987 Lferr_0038 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002218507.1 41931 R 380394 CDS YP_002218508.1 198282187 6875988 complement(42895..44007) 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_1470 secretion protein HlyD family protein; secretion protein HlyD family protein 44007 6875988 Lferr_0039 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002218508.1 42895 R 380394 CDS YP_002218509.1 198282188 6875989 complement(43982..45427) 1 NC_011206.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: kpn:KPN_02576 putative channel/filament proteins; NodT family RND efflux system, outer membrane lipoprotein 45427 6875989 Lferr_0040 Acidithiobacillus ferrooxidans ATCC 53993 NodT family RND efflux system, outer membrane lipoprotein YP_002218509.1 43982 R 380394 CDS YP_002218510.1 198282189 6875990 complement(45417..47072) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_2030 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 47072 6875990 Lferr_0041 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002218510.1 45417 R 380394 CDS YP_002218511.1 198282190 6875991 47544..48752 1 NC_011206.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:Pfl_1664 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 48752 6875991 Lferr_0042 Acidithiobacillus ferrooxidans ATCC 53993 C4-dicarboxylate transporter/malic acid transport protein YP_002218511.1 47544 D 380394 CDS YP_002218512.1 198282191 6875992 48792..49604 1 NC_011206.1 KEGG: bur:Bcep18194_B0411 hypothetical protein; hypothetical protein 49604 6875992 Lferr_0043 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218512.1 48792 D 380394 CDS YP_002218513.1 198282192 6875993 49629..50639 1 NC_011206.1 KEGG: gox:GOX2657 putative sulfate-binding protein; sulfate-binding protein 50639 6875993 Lferr_0044 Acidithiobacillus ferrooxidans ATCC 53993 sulfate-binding protein YP_002218513.1 49629 D 380394 CDS YP_002218514.1 198282193 6875994 50692..51774 1 NC_011206.1 PFAM: TQO small subunit DoxD; DoxX family protein; KEGG: gox:GOX2658 putative terminal quinol oxidase, subunit DoxD; TQO small subunit DoxD 51774 6875994 Lferr_0045 Acidithiobacillus ferrooxidans ATCC 53993 TQO small subunit DoxD YP_002218514.1 50692 D 380394 CDS YP_002218515.1 198282194 6875995 51872..52519 1 NC_011206.1 SMART: Rhodanese domain protein; KEGG: sth:STH108 hypothetical protein; rhodanese domain-containing protein 52519 6875995 Lferr_0046 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002218515.1 51872 D 380394 CDS YP_002218516.1 198282195 6875996 52580..52981 1 NC_011206.1 SMART: Rhodanese domain protein; KEGG: mac:MA2500 hypothetical protein; rhodanese domain-containing protein 52981 6875996 Lferr_0047 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002218516.1 52580 D 380394 CDS YP_002218517.1 198282196 6875997 complement(53012..53530) 1 NC_011206.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: reh:H16_A0306 peroxiredoxin; redoxin domain-containing protein 53530 6875997 Lferr_0048 Acidithiobacillus ferrooxidans ATCC 53993 redoxin domain-containing protein YP_002218517.1 53012 R 380394 CDS YP_002218518.1 198282197 6875998 complement(53603..54685) 1 NC_011206.1 PFAM: TQO small subunit DoxD; DoxX family protein; KEGG: gox:GOX2658 putative terminal quinol oxidase, subunit DoxD; TQO small subunit DoxD 54685 6875998 Lferr_0049 Acidithiobacillus ferrooxidans ATCC 53993 TQO small subunit DoxD YP_002218518.1 53603 R 380394 CDS YP_002218519.1 198282198 6875999 complement(54738..55751) 1 NC_011206.1 KEGG: gox:GOX2657 putative sulfate-binding protein; sulfate-binding protein 55751 6875999 Lferr_0050 Acidithiobacillus ferrooxidans ATCC 53993 sulfate-binding protein YP_002218519.1 54738 R 380394 CDS YP_002218520.1 198282199 6876000 complement(55773..56585) 1 NC_011206.1 KEGG: bam:Bamb_4603 hypothetical protein; hypothetical protein 56585 6876000 Lferr_0051 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218520.1 55773 R 380394 CDS YP_002218521.1 198282200 6876001 complement(56620..57090) 1 NC_011206.1 hypothetical protein 57090 6876001 Lferr_0052 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218521.1 56620 R 380394 CDS YP_002218522.1 198282201 6876002 complement(57137..57919) 1 NC_011206.1 hypothetical protein 57919 6876002 Lferr_0053 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218522.1 57137 R 380394 CDS YP_002218523.1 198282202 6876003 complement(57923..58981) 1 NC_011206.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nis:NIS_0041 hypothetical protein; hypothetical protein 58981 6876003 Lferr_0054 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218523.1 57923 R 380394 CDS YP_002218524.1 198282203 6876004 complement(59118..59774) 1 NC_011206.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: reh:H16_A3413 putative transporter; multiple antibiotic resistance (MarC)-like protein 59774 6876004 Lferr_0055 Acidithiobacillus ferrooxidans ATCC 53993 multiple antibiotic resistance (MarC)-like protein YP_002218524.1 59118 R 380394 CDS YP_002218525.1 198282204 6876005 59886..60143 1 NC_011206.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: aeh:Mlg_0229 putative regulatory protein, FmdB family; FmdB family regulatory protein 60143 6876005 Lferr_0056 Acidithiobacillus ferrooxidans ATCC 53993 FmdB family regulatory protein YP_002218525.1 59886 D 380394 CDS YP_002218526.1 198282205 6876006 60227..62017 1 NC_011206.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: net:Neut_0616 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 62017 6876006 Lferr_0057 Acidithiobacillus ferrooxidans ATCC 53993 aspartyl-tRNA synthetase YP_002218526.1 60227 D 380394 CDS YP_002218527.1 198282206 6876007 62103..63200 1 NC_011206.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 63200 6876007 Lferr_0058 Acidithiobacillus ferrooxidans ATCC 53993 quinolinate synthetase YP_002218527.1 62103 D 380394 CDS YP_002218528.1 198282207 6876008 63209..63820 1 NC_011206.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: noc:Noc_2382 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 63820 6876008 Lferr_0059 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid/glycerol acyltransferase YP_002218528.1 63209 D 380394 CDS YP_002218529.1 198282208 6876009 63900..64652 1 NC_011206.1 PFAM: protein of unknown function DUF28; KEGG: gur:Gura_1416 hypothetical protein; hypothetical protein 64652 6876009 Lferr_0060 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218529.1 63900 D 380394 CDS YP_002218530.1 198282209 6876010 64678..65235 1 NC_011206.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; holliday junction resolvase 65235 ruvC 6876010 ruvC Acidithiobacillus ferrooxidans ATCC 53993 holliday junction resolvase YP_002218530.1 64678 D 380394 CDS YP_002218531.1 198282210 6876011 65264..65845 1 NC_011206.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; holliday junction DNA helicase RuvA 65845 ruvA 6876011 ruvA Acidithiobacillus ferrooxidans ATCC 53993 holliday junction DNA helicase RuvA YP_002218531.1 65264 D 380394 CDS YP_002218532.1 198282211 6876012 65888..66910 1 NC_011206.1 KEGG: xcv:XCV3277 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 66910 6876012 Lferr_0063 Acidithiobacillus ferrooxidans ATCC 53993 Holliday junction DNA helicase RuvB YP_002218532.1 65888 D 380394 CDS YP_002218533.1 198282212 6876013 66900..67322 1 NC_011206.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mca:MCA1224 thioesterase family protein; tol-pal system-associated acyl-CoA thioesterase 67322 6876013 Lferr_0064 Acidithiobacillus ferrooxidans ATCC 53993 tol-pal system-associated acyl-CoA thioesterase YP_002218533.1 66900 D 380394 CDS YP_002218534.1 198282213 6876014 67329..68030 1 NC_011206.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A3917 biopolymer transport proteins, MotA/TolQ/ExbB family; protein TolQ 68030 6876014 Lferr_0065 Acidithiobacillus ferrooxidans ATCC 53993 protein TolQ YP_002218534.1 67329 D 380394 CDS YP_002218535.1 198282214 6876015 68027..68437 1 NC_011206.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: abo:ABO_0756 biopolymer transport protein TolR; protein TolR 68437 6876015 Lferr_0066 Acidithiobacillus ferrooxidans ATCC 53993 protein TolR YP_002218535.1 68027 D 380394 CDS YP_002218536.1 198282215 6876016 68434..69387 1 NC_011206.1 TIGRFAM: TonB family protein; protein TolA; KEGG: bpt:Bpet0659 colicin exporter; protein TolA 69387 6876016 Lferr_0067 Acidithiobacillus ferrooxidans ATCC 53993 protein TolA YP_002218536.1 68434 D 380394 CDS YP_002218537.1 198282216 6876017 69380..70648 1 NC_011206.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: mca:MCA1229 translocation protein TolB; Tol-Pal system beta propeller repeat-containing protein TolB 70648 6876017 Lferr_0068 Acidithiobacillus ferrooxidans ATCC 53993 Tol-Pal system beta propeller repeat-containing protein TolB YP_002218537.1 69380 D 380394 CDS YP_002218538.1 198282217 6876018 complement(70690..71379) 1 NC_011206.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: tbd:Tbd_2202 ExsB ATPase; exsB protein 71379 6876018 Lferr_0069 Acidithiobacillus ferrooxidans ATCC 53993 exsB protein YP_002218538.1 70690 R 380394 CDS YP_002218539.1 198282218 6876019 complement(71382..72026) 1 NC_011206.1 PFAM: Radical SAM domain protein; KEGG: noc:Noc_0148 radical SAM domain protein; radical SAM protein 72026 6876019 Lferr_0070 Acidithiobacillus ferrooxidans ATCC 53993 radical SAM protein YP_002218539.1 71382 R 380394 CDS YP_002218540.1 198282219 6876020 complement(72026..72844) 1 NC_011206.1 TIGRFAM: tol-pal system protein YbgF; KEGG: yen:YE2930 hypothetical protein; tol-pal system protein YbgF 72844 6876020 Lferr_0071 Acidithiobacillus ferrooxidans ATCC 53993 tol-pal system protein YbgF YP_002218540.1 72026 R 380394 CDS YP_002218541.1 198282220 6876021 complement(72865..73443) 1 NC_011206.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: swi:Swit_2132 peptidoglycan-associated lipoprotein; peptidoglycan-associated lipoprotein 73443 6876021 Lferr_0072 Acidithiobacillus ferrooxidans ATCC 53993 peptidoglycan-associated lipoprotein YP_002218541.1 72865 R 380394 CDS YP_002218542.1 198282221 6876022 73504..73800 1 NC_011206.1 hypothetical protein 73800 6876022 Lferr_0073 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218542.1 73504 D 380394 CDS YP_002218543.1 198282222 6876023 73778..73978 1 NC_011206.1 KEGG: rpb:RPB_2525 hypothetical protein; hypothetical protein 73978 6876023 Lferr_0074 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218543.1 73778 D 380394 CDS YP_002218544.1 198282223 6876024 complement(74064..75482) 1 NC_011206.1 KEGG: stm:STM2082 undecaprenol-phosphate galactosephosphotransferase/O-antigen transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP 75482 6876024 Lferr_0075 Acidithiobacillus ferrooxidans ATCC 53993 Undecaprenyl-phosphate galactose phosphotransferase, WbaP YP_002218544.1 74064 R 380394 CDS YP_002218545.1 198282224 6876025 75701..76525 1 NC_011206.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mtp:Mthe_0945 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 76525 6876025 Lferr_0076 Acidithiobacillus ferrooxidans ATCC 53993 lipopolysaccharide biosynthesis protein YP_002218545.1 75701 D 380394 CDS YP_002218546.1 198282225 6876026 76601..76972 1 NC_011206.1 PFAM: regulatory protein MarR; KEGG: lbl:LBL_1164 transcriptional regulator; marR family transcriptional regulator 76972 6876026 Lferr_0077 Acidithiobacillus ferrooxidans ATCC 53993 marR family transcriptional regulator YP_002218546.1 76601 D 380394 CDS YP_002218547.1 198282226 6876027 77057..77167 1 NC_011206.1 hypothetical protein 77167 6876027 Lferr_0078 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218547.1 77057 D 380394 CDS YP_002218548.1 198282227 6876028 77164..78663 1 NC_011206.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpm:BURPS1710b_A0753 polysaccharide biosynthesis family protein; polysaccharide biosynthesis protein 78663 6876028 Lferr_0079 Acidithiobacillus ferrooxidans ATCC 53993 polysaccharide biosynthesis protein YP_002218548.1 77164 D 380394 CDS YP_002218549.1 198282228 6876029 78653..79714 1 NC_011206.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_2177 methylase involved in ubiquinone/menaquinone biosynthesis-like; type 11 methyltransferase 79714 6876029 Lferr_0080 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002218549.1 78653 D 380394 CDS YP_002218550.1 198282229 6876030 79738..80760 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: plt:Plut_0770 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 80760 6876030 Lferr_0081 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002218550.1 79738 D 380394 CDS YP_002218551.1 198282230 6876031 80757..81968 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: plt:Plut_0772 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 81968 6876031 Lferr_0082 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002218551.1 80757 D 380394 CDS YP_002218552.1 198282231 6876032 81984..83264 1 NC_011206.1 KEGG: psa:PST_1755 hypothetical protein; hypothetical protein 83264 6876032 Lferr_0083 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218552.1 81984 D 380394 CDS YP_002218553.1 198282232 6876033 83271..84311 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: dge:Dgeo_0347 glycosyl transferase, group 1; group 1 glycosyl transferase 84311 6876033 Lferr_0084 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002218553.1 83271 D 380394 CDS YP_002218554.1 198282233 6876034 84379..85305 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: pfl:PFL_4219 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 85305 6876034 Lferr_0085 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002218554.1 84379 D 380394 CDS YP_002218555.1 198282234 6876035 85298..85666 1 NC_011206.1 KEGG: drm:Dred_3127 glycosyl transferase, group 1; group 1 glycosyl transferase 85666 6876035 Lferr_0086 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002218555.1 85298 D 380394 CDS YP_002218556.1 198282235 6876037 86406..86627 1 NC_011206.1 KEGG: dol:Dole_1901 prevent-host-death family protein; prevent-host-death family protein 86627 6876037 Lferr_0087 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002218556.1 86406 D 380394 CDS YP_002218557.1 198282236 6876038 86627..87040 1 NC_011206.1 KEGG: sfu:Sfum_0407 hypothetical protein; hypothetical protein 87040 6876038 Lferr_0088 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218557.1 86627 D 380394 CDS YP_002218558.1 198282237 6876039 87037..87327 1 NC_011206.1 KEGG: bth:BT_2327 hypothetical protein; hypothetical protein 87327 6876039 Lferr_0089 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218558.1 87037 D 380394 CDS YP_002218559.1 198282238 6876040 87493..87768 1 NC_011206.1 PFAM: plasmid maintenance system killer; KEGG: rpa:RPA2283 putative proteic killer suppression protein (plasmid Rts1); plasmid maintenance system killer protein 87768 6876040 Lferr_0090 Acidithiobacillus ferrooxidans ATCC 53993 plasmid maintenance system killer protein YP_002218559.1 87493 D 380394 CDS YP_002218560.1 198282239 6876041 87784..88101 1 NC_011206.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: rpc:RPC_4745 putative plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 88101 6876041 Lferr_0091 Acidithiobacillus ferrooxidans ATCC 53993 XRE family plasmid maintenance system antidote protein YP_002218560.1 87784 D 380394 CDS YP_002218561.1 198282240 6876042 complement(88077..88229) 1 NC_011206.1 hypothetical protein 88229 6876042 Lferr_0092 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218561.1 88077 R 380394 CDS YP_002218562.1 198282241 6876043 complement(88395..88502) 1 NC_011206.1 hypothetical protein 88502 6876043 Lferr_0093 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218562.1 88395 R 380394 CDS YP_002218563.1 198282242 6876044 88715..89878 1 NC_011206.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: mca:MCA0835 fic family protein; filamentation induced by cAMP protein fic 89878 6876044 Lferr_0094 Acidithiobacillus ferrooxidans ATCC 53993 filamentation induced by cAMP protein fic YP_002218563.1 88715 D 380394 CDS YP_002218564.1 198282243 6876046 complement(90438..90680) 1 NC_011206.1 TIGRFAM: prevent-host-death family protein; KEGG: reh:H16_A3382 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 90680 6876046 Lferr_0096 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002218564.1 90438 R 380394 CDS YP_002218565.1 198282244 6876047 complement(90764..90937) 1 NC_011206.1 PFAM: Proto-chlorophyllide reductase 57 kD subunit; KEGG: gvi:glr0215 light-independent protochlorophyllide reductase subunit B; proto-chlorophyllide reductase 57 kD subunit 90937 6876047 Lferr_0097 Acidithiobacillus ferrooxidans ATCC 53993 proto-chlorophyllide reductase 57 kD subunit YP_002218565.1 90764 R 380394 CDS YP_002218566.1 198282245 6876048 complement(91048..91476) 1 NC_011206.1 KEGG: eba:ebD76 hypothetical protein; hypothetical protein 91476 6876048 Lferr_0098 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218566.1 91048 R 380394 CDS YP_002218567.1 198282246 6876049 complement(91479..91910) 1 NC_011206.1 KEGG: eba:ebD75 hypothetical protein; hypothetical protein 91910 6876049 Lferr_0099 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218567.1 91479 R 380394 CDS YP_002218568.1 198282247 6876050 complement(92056..94248) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; DoxX family protein; KEGG: lpp:lpp0727 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 94248 6876050 Lferr_0100 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002218568.1 92056 R 380394 CDS YP_002218569.1 198282248 6876051 94434..94880 1 NC_011206.1 KEGG: ppf:Pput_3153 amidase; hypothetical protein 94880 6876051 Lferr_0101 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218569.1 94434 D 380394 CDS YP_002218570.1 198282249 6876052 complement(94887..95972) 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1295 secretion protein HlyD family protein; secretion protein HlyD family protein 95972 6876052 Lferr_0102 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002218570.1 94887 R 380394 CDS YP_002218571.1 198282250 6876053 complement(95962..96654) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_1294 ABC transporter related; ABC transporter-like protein 96654 6876053 Lferr_0103 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002218571.1 95962 R 380394 CDS YP_002218572.1 198282251 6876054 complement(96656..97792) 1 NC_011206.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1293 protein of unknown function DUF214; hypothetical protein 97792 6876054 Lferr_0104 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218572.1 96656 R 380394 CDS YP_002218573.1 198282252 6876055 98125..98361 1 NC_011206.1 hypothetical protein 98361 6876055 Lferr_0105 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218573.1 98125 D 380394 CDS YP_002218574.1 198282253 6876056 complement(98398..99663) 1 NC_011206.1 KEGG: acr:Acry_1405 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 99663 6876056 Lferr_0106 Acidithiobacillus ferrooxidans ATCC 53993 natural resistance-associated macrophage protein YP_002218574.1 98398 R 380394 CDS YP_002218575.1 198282254 6876057 complement(99750..101051) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cps:CPS_4596 osmolarity sensor protein; integral membrane sensor signal transduction histidine kinase 101051 6876057 Lferr_0107 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002218575.1 99750 R 380394 CDS YP_002218576.1 198282255 6876058 complement(101054..101758) 1 NC_011206.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: asa:ASA_4091 two-component system osmolarity response regulator OmpR; winged helix family two component transcriptional regulator 101758 6876058 Lferr_0108 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002218576.1 101054 R 380394 CDS YP_002218577.1 198282256 6876059 101985..103544 1 NC_011206.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pfl:PFL_3615 ABC-type export system, outer membrane channel protein; NodT family RND efflux system, outer membrane lipoprotein 103544 6876059 Lferr_0109 Acidithiobacillus ferrooxidans ATCC 53993 NodT family RND efflux system, outer membrane lipoprotein YP_002218577.1 101985 D 380394 CDS YP_002218578.1 198282257 6876060 103541..104623 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: noc:Noc_0200 secretion protein HlyD; RND family efflux transporter MFP subunit 104623 6876060 Lferr_0110 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002218578.1 103541 D 380394 CDS YP_002218579.1 198282258 6876061 104641..107727 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: noc:Noc_0201 acriflavin resistance protein; acriflavin resistance protein 107727 6876061 Lferr_0111 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002218579.1 104641 D 380394 CDS YP_002218580.1 198282259 6876062 107804..107965 1 NC_011206.1 KEGG: bur:Bcep18194_A5683 hypothetical protein; hypothetical protein 107965 6876062 Lferr_0112 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218580.1 107804 D 380394 CDS YP_002218581.1 198282260 6876063 108222..108758 1 NC_011206.1 PFAM: protein of unknown function DUF924; KEGG: vpa:VPA0111 hypothetical protein; hypothetical protein 108758 6876063 Lferr_0113 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218581.1 108222 D 380394 CDS YP_002218582.1 198282261 6876064 109071..110090 1 NC_011206.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: aau:AAur_4145 putative lipase/esterase protein; Alpha/beta hydrolase fold-3 domain-containing protein 110090 6876064 Lferr_0114 Acidithiobacillus ferrooxidans ATCC 53993 Alpha/beta hydrolase fold-3 domain-containing protein YP_002218582.1 109071 D 380394 CDS YP_002218583.1 198282262 6876065 110110..111546 1 NC_011206.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ppr:PBPRA2462 hypothetical protein; hypothetical protein 111546 6876065 Lferr_0115 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218583.1 110110 D 380394 CDS YP_002218584.1 198282263 6876066 111568..111804 1 NC_011206.1 hypothetical protein 111804 6876066 Lferr_0116 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218584.1 111568 D 380394 CDS YP_002218585.1 198282264 6876067 112309..113193 1 NC_011206.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: zmo:ZMO0137 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 113193 6876067 Lferr_0117 Acidithiobacillus ferrooxidans ATCC 53993 Sel1 domain-containing protein repeat-containing protein YP_002218585.1 112309 D 380394 CDS YP_002218586.1 198282265 6876068 complement(113529..113843) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 113843 6876068 Lferr_0118 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002218586.1 113529 R 380394 CDS YP_002218587.1 198282266 6876069 complement(113965..115284) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 115284 6876069 Lferr_0119 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218587.1 113965 R 380394 CDS YP_002218588.1 198282267 6876070 115525..116220 1 NC_011206.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: dsh:Dshi_2521 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 116220 6876070 Lferr_0120 Acidithiobacillus ferrooxidans ATCC 53993 Crp/Fnr family transcriptional regulator YP_002218588.1 115525 D 380394 CDS YP_002218589.1 198282268 6876071 116310..116516 1 NC_011206.1 KEGG: swi:Swit_3731 hypothetical protein; hypothetical protein 116516 6876071 Lferr_0121 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218589.1 116310 D 380394 CDS YP_002218590.1 198282269 6876072 116816..117169 1 NC_011206.1 KEGG: rme:Rmet_1060 protein of unknown function DUF455; hypothetical protein 117169 6876072 Lferr_0122 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218590.1 116816 D 380394 CDS YP_002218591.1 198282270 6876073 117162..118169 1 NC_011206.1 KEGG: abo:ABO_2059 glycoprotease family protein; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 118169 6876073 Lferr_0123 Acidithiobacillus ferrooxidans ATCC 53993 glycoprotease family metalloendopeptidase YP_002218591.1 117162 D 380394 CDS YP_002218592.1 198282271 6876074 118169..118696 1 NC_011206.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: aae:aq_2197 hypothetical protein; hypothetical protein 118696 6876074 Lferr_0124 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218592.1 118169 D 380394 CDS YP_002218593.1 198282272 6876075 complement(118703..119299) 1 NC_011206.1 PFAM: protein of unknown function DUF205; KEGG: noc:Noc_0040 protein of unknown function DUF205; hypothetical protein 119299 6876075 Lferr_0125 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218593.1 118703 R 380394 CDS YP_002218594.1 198282273 6876076 119372..119731 1 NC_011206.1 TIGRFAM: dihydroneopterin aldolase; KEGG: sde:Sde_0723 dihydroneopterin aldolase; dihydroneopterin aldolase 119731 6876076 Lferr_0126 Acidithiobacillus ferrooxidans ATCC 53993 dihydroneopterin aldolase YP_002218594.1 119372 D 380394 CDS YP_002218595.1 198282274 6876077 complement(119749..121077) 1 NC_011206.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 121077 rimO 6876077 rimO Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S12 methylthiotransferase YP_002218595.1 119749 R 380394 CDS YP_002218596.1 198282275 6876078 121095..122675 1 NC_011206.1 PFAM: Resolvase domain; Recombinase; KEGG: pst:PSPTO_4018 hypothetical protein; Resolvase domain 122675 6876078 Lferr_0128 Acidithiobacillus ferrooxidans ATCC 53993 Resolvase domain YP_002218596.1 121095 D 380394 CDS YP_002218597.1 198282276 6876079 complement(122703..122993) 1 NC_011206.1 KEGG: pst:PSPTO_4011 hypothetical protein; hypothetical protein 122993 6876079 Lferr_0129 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218597.1 122703 R 380394 CDS YP_002218598.1 198282277 6876080 complement(122990..123085) 1 NC_011206.1 hypothetical protein 123085 6876080 Lferr_0130 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218598.1 122990 R 380394 CDS YP_002218599.1 198282278 6876081 complement(123085..123309) 1 NC_011206.1 hypothetical protein 123309 6876081 Lferr_0131 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218599.1 123085 R 380394 CDS YP_002218600.1 198282279 6876082 123504..123794 1 NC_011206.1 KEGG: apj:APJL_0499 hypothetical protein; hypothetical protein 123794 6876082 Lferr_0132 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218600.1 123504 D 380394 CDS YP_002218601.1 198282280 6876083 123791..124138 1 NC_011206.1 KEGG: apj:APJL_0498 hypothetical protein; hypothetical protein 124138 6876083 Lferr_0133 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218601.1 123791 D 380394 CDS YP_002218602.1 198282281 6876084 complement(124221..124679) 1 NC_011206.1 PFAM: helix-turn-helix domain protein; KEGG: ecw:EcE24377A_2252 putative transcriptional regulator DicA; XRE family transcriptional regulator 124679 6876084 Lferr_0134 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002218602.1 124221 R 380394 CDS YP_002218603.1 198282282 6876085 complement(124730..124861) 1 NC_011206.1 hypothetical protein 124861 6876085 Lferr_0135 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218603.1 124730 R 380394 CDS YP_002218604.1 198282283 6876086 125101..126162 1 NC_011206.1 KEGG: nha:Nham_3348 hypothetical protein; hypothetical protein 126162 6876086 Lferr_0136 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218604.1 125101 D 380394 CDS YP_002218605.1 198282284 6876087 126173..127027 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpl:BURPS1106A_1434 DNA replication protein DnaC, putative; IstB domain-containing ATP-binding protein 127027 6876087 Lferr_0137 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002218605.1 126173 D 380394 CDS YP_002218606.1 198282285 6876088 127024..128220 1 NC_011206.1 KEGG: dre:567929 similar to Apoptotic chromatin condensation inducer in the nucleus (Acinus); hypothetical protein 128220 6876088 Lferr_0138 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218606.1 127024 D 380394 CDS YP_002218607.1 198282286 6876089 128217..129107 1 NC_011206.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cau:Caur_0075 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 129107 6876089 Lferr_0139 Acidithiobacillus ferrooxidans ATCC 53993 D12 class N6 adenine-specific DNA methyltransferase YP_002218607.1 128217 D 380394 CDS YP_002218608.1 198282287 6876090 129170..129664 1 NC_011206.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: net:Neut_2461 single-strand binding protein; ssDNA-binding protein 129664 6876090 Lferr_0140 Acidithiobacillus ferrooxidans ATCC 53993 ssDNA-binding protein YP_002218608.1 129170 D 380394 CDS YP_002218609.1 198282288 6876091 complement(130607..131815) 1 NC_011206.1 KEGG: psa:PST_1472 hypothetical protein; hypothetical protein 131815 6876091 Lferr_0141 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218609.1 130607 R 380394 CDS YP_002218610.1 198282289 6876092 complement(131809..133446) 1 NC_011206.1 KEGG: bca:BCE_0186 hypothetical protein; hypothetical protein 133446 6876092 Lferr_0142 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218610.1 131809 R 380394 CDS YP_002218611.1 198282290 6876093 complement(133473..135074) 1 NC_011206.1 KEGG: ava:Ava_3495 Tn7-like transposition protein D; hypothetical protein 135074 6876093 Lferr_0143 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218611.1 133473 R 380394 CDS YP_002218612.1 198282291 6876094 complement(135071..136750) 1 NC_011206.1 KEGG: cth:Cthe_1115 Tn7-like transposition protein C; Tn7-like transposition protein C 136750 6876094 Lferr_0144 Acidithiobacillus ferrooxidans ATCC 53993 Tn7-like transposition protein C YP_002218612.1 135071 R 380394 CDS YP_002218613.1 198282292 6876095 complement(136991..137407) 1 NC_011206.1 KEGG: ajs:Ajs_2731 transposase family protein; transposase family protein 137407 6876095 Lferr_0145 Acidithiobacillus ferrooxidans ATCC 53993 transposase family protein YP_002218613.1 136991 R 380394 CDS YP_002218614.1 198282293 6876096 complement(137517..138020) 1 NC_011206.1 KEGG: pna:Pnap_4483 hypothetical protein; hypothetical protein 138020 6876096 Lferr_0146 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218614.1 137517 R 380394 CDS YP_002218615.1 198282294 6876097 138282..138935 1 NC_011206.1 PFAM: regulatory protein TetR; KEGG: hch:HCH_01739 transcriptional regulator; TetR family transcriptional regulator 138935 6876097 Lferr_0147 Acidithiobacillus ferrooxidans ATCC 53993 TetR family transcriptional regulator YP_002218615.1 138282 D 380394 CDS YP_002218616.1 198282295 6876098 138928..139215 1 NC_011206.1 hypothetical protein 139215 6876098 Lferr_0148 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218616.1 138928 D 380394 CDS YP_002218617.1 198282296 6876099 139270..140589 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 140589 6876099 Lferr_0149 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218617.1 139270 D 380394 CDS YP_002218618.1 198282297 6876100 140711..141025 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 141025 6876100 Lferr_0150 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002218618.1 140711 D 380394 CDS YP_002218619.1 198282298 6876101 141169..141801 1 NC_011206.1 KEGG: sil:SPOA0342 hypothetical protein; hypothetical protein 141801 6876101 Lferr_0151 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218619.1 141169 D 380394 CDS YP_002218620.1 198282299 6876102 141847..143166 1 NC_011206.1 PFAM: amine oxidase; KEGG: cte:CT1357 hypothetical protein; amine oxidase 143166 6876102 Lferr_0152 Acidithiobacillus ferrooxidans ATCC 53993 amine oxidase YP_002218620.1 141847 D 380394 CDS YP_002218621.1 198282300 6876103 143186..144202 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: hau:Haur_1207 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 144202 6876103 Lferr_0153 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002218621.1 143186 D 380394 CDS YP_002218622.1 198282301 6876104 complement(144897..146084) 1 NC_011206.1 PFAM: Carbohydrate-selective porin OprB; KEGG: mex:Mext_1384 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 146084 6876104 Lferr_0154 Acidithiobacillus ferrooxidans ATCC 53993 carbohydrate-selective porin OprB YP_002218622.1 144897 R 380394 CDS YP_002218623.1 198282302 6876105 complement(146114..146818) 1 NC_011206.1 PFAM: MgtC/SapB transporter; KEGG: dac:Daci_1228 MgtC/SapB transporter; MgtC/SapB transporter 146818 6876105 Lferr_0155 Acidithiobacillus ferrooxidans ATCC 53993 MgtC/SapB transporter YP_002218623.1 146114 R 380394 CDS YP_002218624.1 198282303 6876106 complement(146835..147035) 1 NC_011206.1 KEGG: acr:Acry_3565 hypothetical protein; hypothetical protein 147035 6876106 Lferr_0156 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218624.1 146835 R 380394 CDS YP_002218625.1 198282304 6876107 complement(147046..148416) 1 NC_011206.1 KEGG: acr:Acry_3564 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 148416 6876107 Lferr_0157 Acidithiobacillus ferrooxidans ATCC 53993 natural resistance-associated macrophage protein YP_002218625.1 147046 R 380394 CDS YP_002218626.1 198282305 6876108 148603..148905 1 NC_011206.1 hypothetical protein 148905 6876108 Lferr_0158 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218626.1 148603 D 380394 CDS YP_002218627.1 198282306 6876109 complement(148974..149381) 1 NC_011206.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mca:MCA1339 mercuric resistance operon regulatory protein; merR family transcriptional regulator 149381 6876109 Lferr_0159 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002218627.1 148974 R 380394 CDS YP_002218628.1 198282307 6876110 149482..149919 1 NC_011206.1 PFAM: MerC mercury resistance protein; KEGG: sfr:Sfri_3489 MerC mercury resistance protein; mercury transport protein MerC 149919 6876110 Lferr_0160 Acidithiobacillus ferrooxidans ATCC 53993 mercury transport protein MerC YP_002218628.1 149482 D 380394 CDS YP_002218629.1 198282308 6876111 149933..151354 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1298 mercuric reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 151354 6876111 Lferr_0161 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002218629.1 149933 D 380394 CDS YP_002218630.1 198282309 6876112 complement(151506..152192) 1 NC_011206.1 PFAM: Heavy metal transport/detoxification protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_1298 mercuric reductase; heavy metal transport/detoxification protein 152192 6876112 Lferr_0162 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal transport/detoxification protein YP_002218630.1 151506 R 380394 CDS YP_002218631.1 198282310 6876113 complement(152206..152643) 1 NC_011206.1 PFAM: MerC mercury resistance protein; KEGG: sfr:Sfri_3489 MerC mercury resistance protein; mercury transport protein MerC 152643 6876113 Lferr_0163 Acidithiobacillus ferrooxidans ATCC 53993 mercury transport protein MerC YP_002218631.1 152206 R 380394 CDS YP_002218632.1 198282311 6876114 152744..153151 1 NC_011206.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1301 putative transcriptional regulator, MerR family; merR family transcriptional regulator 153151 6876114 Lferr_0164 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002218632.1 152744 D 380394 CDS YP_002218633.1 198282312 6876115 complement(153522..154436) 1 NC_011206.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_0456 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase GroES domain-containing protein 154436 6876115 Lferr_0165 Acidithiobacillus ferrooxidans ATCC 53993 alcohol dehydrogenase GroES domain-containing protein YP_002218633.1 153522 R 380394 CDS YP_002218634.1 198282313 6876117 complement(155529..157553) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: tbd:Tbd_2740 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase 157553 6876117 Lferr_0167 Acidithiobacillus ferrooxidans ATCC 53993 copper-translocating P-type ATPase YP_002218634.1 155529 R 380394 CDS YP_002218635.1 198282314 6876118 complement(157841..158104) 1 NC_011206.1 KEGG: tbd:Tbd_2741 hypothetical protein; hypothetical protein 158104 6876118 Lferr_0168 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218635.1 157841 R 380394 CDS YP_002218636.1 198282315 6876120 159251..160561 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: mca:MCA2262 outer membrane heavy metal efflux protein; outer membrane efflux protein 160561 6876120 Lferr_0170 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002218636.1 159251 D 380394 CDS YP_002218637.1 198282316 6876121 160558..161874 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_03019 membrane-fusion protein; RND family efflux transporter MFP subunit 161874 6876121 Lferr_0171 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002218637.1 160558 D 380394 CDS YP_002218638.1 198282317 6876122 161867..164977 1 NC_011206.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: lpc:LPC_2243 cation efflux system protein CusA; CzcA family heavy metal efflux pump 164977 6876122 Lferr_0172 Acidithiobacillus ferrooxidans ATCC 53993 CzcA family heavy metal efflux pump YP_002218638.1 161867 D 380394 CDS YP_002218639.1 198282318 6876123 165003..165749 1 NC_011206.1 PFAM: cytochrome B561; KEGG: tbd:Tbd_0139 cytochrome b, putative; cytochrome B561 165749 6876123 Lferr_0173 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome B561 YP_002218639.1 165003 D 380394 CDS YP_002218640.1 198282319 6876124 165878..166240 1 NC_011206.1 KEGG: tbd:Tbd_1332 hypothetical protein; hypothetical protein 166240 6876124 Lferr_0174 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218640.1 165878 D 380394 CDS YP_002218641.1 198282320 6876125 166355..166663 1 NC_011206.1 hypothetical protein 166663 6876125 Lferr_0175 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218641.1 166355 D 380394 CDS YP_002218642.1 198282321 6876126 complement(166806..166982) 1 NC_011206.1 KEGG: eba:ebA3777 transposase; transposase 166982 6876126 Lferr_0176 Acidithiobacillus ferrooxidans ATCC 53993 transposase YP_002218642.1 166806 R 380394 CDS YP_002218643.1 198282322 6876127 167196..168023 1 NC_011206.1 KEGG: lpn:lpg1465 hypothetical protein; hypothetical protein 168023 6876127 Lferr_0177 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218643.1 167196 D 380394 CDS YP_002218644.1 198282323 6876128 168476..168706 1 NC_011206.1 hypothetical protein 168706 6876128 Lferr_0178 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218644.1 168476 D 380394 CDS YP_002218645.1 198282324 6876129 168756..168959 1 NC_011206.1 hypothetical protein 168959 6876129 Lferr_0179 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218645.1 168756 D 380394 CDS YP_002218646.1 198282325 6876130 169230..169700 1 NC_011206.1 KEGG: psa:PST_0673 ISPsy14, transposase; ISPsy14, transposase 169700 6876130 Lferr_0180 Acidithiobacillus ferrooxidans ATCC 53993 ISPsy14, transposase YP_002218646.1 169230 D 380394 CDS YP_002218647.1 198282326 6876131 169876..171033 1 NC_011206.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: pol:Bpro_0339 integrase, catalytic region; integrase catalytic subunit 171033 6876131 Lferr_0181 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002218647.1 169876 D 380394 CDS YP_002218648.1 198282327 6876132 171179..171448 1 NC_011206.1 PFAM: helix-turn-helix domain protein; KEGG: vei:Veis_4348 hypothetical protein; XRE family transcriptional regulator 171448 6876132 Lferr_0182 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002218648.1 171179 D 380394 CDS YP_002218649.1 198282328 6876133 complement(171700..174798) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: bte:BTH_II1184 heavy metal efflux pump CzcA, putative; acriflavin resistance protein 174798 6876133 Lferr_0183 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002218649.1 171700 R 380394 CDS YP_002218650.1 198282329 6876134 complement(174839..175966) 1 NC_011206.1 KEGG: mfa:Mfla_1631 hypothetical protein; hypothetical protein 175966 6876134 Lferr_0184 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218650.1 174839 R 380394 CDS YP_002218651.1 198282330 6876135 complement(175963..177420) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: bte:BTH_II1186 divalent cation resistant determinant protein C, putative; outer membrane efflux protein 177420 6876135 Lferr_0185 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002218651.1 175963 R 380394 CDS YP_002218652.1 198282331 6876136 complement(177420..179432) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: hau:Haur_3281 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 179432 6876136 Lferr_0186 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal translocating P-type ATPase YP_002218652.1 177420 R 380394 CDS YP_002218653.1 198282332 6876137 complement(179462..179845) 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: dar:Daro_2281 regulatory protein, ArsR; arsR family transcriptional regulator 179845 6876137 Lferr_0187 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002218653.1 179462 R 380394 CDS YP_002218654.1 198282333 6876138 180170..181318 1 NC_011206.1 PFAM: aminotransferase class V; KEGG: sth:STH641 cysteine desulfurase; class V aminotransferase 181318 6876138 Lferr_0188 Acidithiobacillus ferrooxidans ATCC 53993 class V aminotransferase YP_002218654.1 180170 D 380394 CDS YP_002218655.1 198282334 6876139 181318..181959 1 NC_011206.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_0626 methyltransferase type 11; type 11 methyltransferase 181959 6876139 Lferr_0189 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002218655.1 181318 D 380394 CDS YP_002218656.1 198282335 6876140 complement(182109..182792) 1 NC_011206.1 KEGG: eca:ECA3377 glutaredoxin 2; glutaredoxin 182792 6876140 Lferr_0190 Acidithiobacillus ferrooxidans ATCC 53993 glutaredoxin YP_002218656.1 182109 R 380394 CDS YP_002218657.1 198282336 6876141 182923..183297 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: dar:Daro_0687 regulatory protein, ArsR; arsR family transcriptional regulator 183297 6876141 Lferr_0191 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002218657.1 182923 D 380394 CDS YP_002218658.1 198282337 6876142 183288..183533 1 NC_011206.1 KEGG: aau:AAur_pTC10229 hypothetical protein; hypothetical protein 183533 6876142 Lferr_0192 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218658.1 183288 D 380394 CDS YP_002218659.1 198282338 6876143 183550..184158 1 NC_011206.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll2162 hypothetical protein; type 11 methyltransferase 184158 6876143 Lferr_0193 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002218659.1 183550 D 380394 CDS YP_002218660.1 198282339 6876144 184233..184730 1 NC_011206.1 KEGG: nph:NP4404A hypothetical protein; hypothetical protein 184730 6876144 Lferr_0194 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218660.1 184233 D 380394 CDS YP_002218661.1 198282340 6876145 184835..186019 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vok:COSY_0750 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 186019 6876145 Lferr_0195 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002218661.1 184835 D 380394 CDS YP_002218662.1 198282341 6876146 complement(186312..187421) 1 NC_011206.1 PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_6138 transposase, IS4 family protein; transposase IS4 family protein 187421 6876146 Lferr_0196 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS4 family protein YP_002218662.1 186312 R 380394 CDS YP_002218663.1 198282342 6876147 complement(187640..187849) 1 NC_011206.1 KEGG: rrs:RoseRS_1945 hypothetical protein; hypothetical protein 187849 6876147 Lferr_0197 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218663.1 187640 R 380394 CDS YP_002218664.1 198282343 6876148 complement(187846..188259) 1 NC_011206.1 KEGG: rrs:RoseRS_1944 hypothetical protein; hypothetical protein 188259 6876148 Lferr_0198 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218664.1 187846 R 380394 CDS YP_002218665.1 198282344 6876149 complement(188597..188971) 1 NC_011206.1 KEGG: tbd:Tbd_1332 hypothetical protein; hypothetical protein 188971 6876149 Lferr_0199 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218665.1 188597 R 380394 CDS YP_002218666.1 198282345 6876150 complement(189317..190834) 1 NC_011206.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmn:PMN2A_1233 TPR repeat; hypothetical protein 190834 6876150 Lferr_0200 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218666.1 189317 R 380394 CDS YP_002218667.1 198282346 6876151 complement(191343..191657) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 191657 6876151 Lferr_0201 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002218667.1 191343 R 380394 CDS YP_002218668.1 198282347 6876152 complement(191779..193098) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 193098 6876152 Lferr_0202 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218668.1 191779 R 380394 CDS YP_002218669.1 198282348 6876153 complement(193249..194439) 1 NC_011206.1 KEGG: mrd:Mrad2831_2268 hypothetical protein; hypothetical protein 194439 6876153 Lferr_0203 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218669.1 193249 R 380394 CDS YP_002218670.1 198282349 6876154 194699..195004 1 NC_011206.1 KEGG: gur:Gura_0895 protein of unknown function DUF214; hypothetical protein 195004 6876154 Lferr_0204 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218670.1 194699 D 380394 CDS YP_002218671.1 198282350 6876155 194997..195698 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0678 ABC transporter, ATP-binding protein; ABC transporter-like protein 195698 6876155 Lferr_0205 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002218671.1 194997 D 380394 CDS YP_002218672.1 198282351 6876156 195688..196191 1 NC_011206.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mfa:Mfla_0475 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin domain-containing protein 196191 6876156 Lferr_0206 Acidithiobacillus ferrooxidans ATCC 53993 redoxin domain-containing protein YP_002218672.1 195688 D 380394 CDS YP_002218673.1 198282352 6876157 196205..196660 1 NC_011206.1 KEGG: dar:Daro_2623 thioredoxin:cytochrome c biogenesis protein transmembrane region; thioredoxin:cytochrome c biogenesis protein transmembrane region 196660 6876157 Lferr_0207 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin:cytochrome c biogenesis protein transmembrane region YP_002218673.1 196205 D 380394 CDS YP_002218674.1 198282353 6876158 196917..197318 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: mja:MJ1325 cadmium resistance protein; arsR family transcriptional regulator 197318 6876158 Lferr_0208 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002218674.1 196917 D 380394 CDS YP_002218675.1 198282354 6876159 197318..199225 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: lpn:lpg1010 cadmium efflux ATPase; heavy metal translocating P-type ATPase 199225 6876159 Lferr_0209 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal translocating P-type ATPase YP_002218675.1 197318 D 380394 CDS YP_002218676.1 198282355 6876160 199264..199656 1 NC_011206.1 PFAM: protein of unknown function DUF302; KEGG: lpp:lpp2368 hypothetical protein; hypothetical protein 199656 6876160 Lferr_0210 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218676.1 199264 D 380394 CDS YP_002218677.1 198282356 6876161 199712..199951 1 NC_011206.1 KEGG: tbd:Tbd_0648 hypothetical protein; hypothetical protein 199951 6876161 Lferr_0211 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218677.1 199712 D 380394 CDS YP_002218678.1 198282357 6876163 201226..201552 1 NC_011206.1 KEGG: azo:azo0363 putative ferredoxin 2Fe-2S protein; putative ferredoxin 2Fe-2S protein 201552 6876163 Lferr_0213 Acidithiobacillus ferrooxidans ATCC 53993 putative ferredoxin 2Fe-2S protein YP_002218678.1 201226 D 380394 CDS YP_002218679.1 198282358 6876164 201687..202172 1 NC_011206.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bmu:Bmul_0131 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 202172 6876164 Lferr_0214 Acidithiobacillus ferrooxidans ATCC 53993 pyridoxamine 5'-phosphate oxidase-like protein YP_002218679.1 201687 D 380394 CDS YP_002218680.1 198282359 6876165 202263..203846 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_5344 integrase, catalytic region; integrase catalytic subunit 203846 6876165 Lferr_0215 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002218680.1 202263 D 380394 CDS YP_002218681.1 198282360 6876166 203843..204613 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pna:Pnap_2464 IstB domain protein ATP-binding protein; IstB domain-containing ATP-binding protein 204613 6876166 Lferr_0216 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002218681.1 203843 D 380394 CDS YP_002218682.1 198282361 6876167 204704..205024 1 NC_011206.1 KEGG: tbd:Tbd_1194 hypothetical protein; hypothetical protein 205024 6876167 Lferr_0217 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218682.1 204704 D 380394 CDS YP_002218683.1 198282362 6876168 complement(205275..205529) 1 NC_011206.1 hypothetical protein 205529 6876168 Lferr_0218 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218683.1 205275 R 380394 CDS YP_002218684.1 198282363 6876169 complement(205567..206013) 1 NC_011206.1 KEGG: dol:Dole_0430 hypothetical protein; hypothetical protein 206013 6876169 Lferr_0219 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218684.1 205567 R 380394 CDS YP_002218685.1 198282364 6876170 206171..206533 1 NC_011206.1 KEGG: eba:p2A255 transposion helper protein, ATP-binding protein; hypothetical protein 206533 6876170 Lferr_0220 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218685.1 206171 D 380394 CDS YP_002218686.1 198282365 6876171 complement(206554..208740) 1 NC_011206.1 KEGG: bca:BCE_0183 Tn7-like transposition protein B; Tn7-like transposition protein B 208740 6876171 Lferr_0221 Acidithiobacillus ferrooxidans ATCC 53993 Tn7-like transposition protein B YP_002218686.1 206554 R 380394 CDS YP_002218687.1 198282366 6876172 complement(208744..209589) 1 NC_011206.1 PFAM: TnsA endonuclease; KEGG: hau:Haur_3949 TnsA endonuclease; TnsA endonuclease 209589 6876172 Lferr_0222 Acidithiobacillus ferrooxidans ATCC 53993 TnsA endonuclease YP_002218687.1 208744 R 380394 CDS YP_002218688.1 198282367 6876173 complement(209714..210067) 1 NC_011206.1 KEGG: pap:PSPA7_6043 hypothetical protein; hypothetical protein 210067 6876173 Lferr_0223 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218688.1 209714 R 380394 CDS YP_002218689.1 198282368 6876174 complement(210058..210462) 1 NC_011206.1 KEGG: neu:NE2100 hypothetical protein; hypothetical protein 210462 6876174 Lferr_0224 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218689.1 210058 R 380394 CDS YP_002218690.1 198282369 6876175 complement(210455..211240) 1 NC_011206.1 KEGG: tde:TDE1618 hypothetical protein; hypothetical protein 211240 6876175 Lferr_0225 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218690.1 210455 R 380394 CDS YP_002218691.1 198282370 6876176 complement(211285..213567) 1 NC_011206.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: cch:Cag_0810 DEAD/DEAH box helicase-like; type III restriction protein res subunit 213567 6876176 Lferr_0226 Acidithiobacillus ferrooxidans ATCC 53993 type III restriction protein res subunit YP_002218691.1 211285 R 380394 CDS YP_002218692.1 198282371 6876177 complement(213578..214765) 1 NC_011206.1 PFAM: restriction modification system DNA specificity domain; KEGG: cch:Cag_1122 restriction endonuclease S subunits-like; restriction modification system DNA specificity protein 214765 6876177 Lferr_0227 Acidithiobacillus ferrooxidans ATCC 53993 restriction modification system DNA specificity protein YP_002218692.1 213578 R 380394 CDS YP_002218693.1 198282372 6876178 complement(214762..216216) 1 NC_011206.1 PFAM: N-6 DNA methylase; KEGG: cch:Cag_0807 DNA-methyltransferase, type I restriction-modification enzyme subunit M; N-6 DNA methylase 216216 6876178 Lferr_0228 Acidithiobacillus ferrooxidans ATCC 53993 N-6 DNA methylase YP_002218693.1 214762 R 380394 CDS YP_002218694.1 198282373 6876179 complement(216318..216692) 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3863 PilT protein domain protein; PilT protein domain-containing protein 216692 6876179 Lferr_0229 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002218694.1 216318 R 380394 CDS YP_002218695.1 198282374 6876180 complement(216689..216886) 1 NC_011206.1 KEGG: bur:Bcep18194_B0330 hypothetical protein; hypothetical protein 216886 6876180 Lferr_0230 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218695.1 216689 R 380394 CDS YP_002218696.1 198282375 6876181 complement(217281..217469) 1 NC_011206.1 hypothetical protein 217469 6876181 Lferr_0231 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218696.1 217281 R 380394 CDS YP_002218697.1 198282376 6876182 217862..218302 1 NC_011206.1 SMART: phospholipid/glycerol acyltransferase; KEGG: spt:SPA2875 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; phospholipid/glycerol acyltransferase 218302 6876182 Lferr_0232 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid/glycerol acyltransferase YP_002218697.1 217862 D 380394 CDS YP_002218698.1 198282377 6876183 complement(218478..219050) 1 NC_011206.1 KEGG: mca:MCA2638 hypothetical protein; hypothetical protein 219050 6876183 Lferr_0233 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218698.1 218478 R 380394 CDS YP_002218699.1 198282378 6876184 complement(219051..219515) 1 NC_011206.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: mca:MCA2639 hypothetical protein; excisionase family DNA-binding domain-containing protein 219515 6876184 Lferr_0234 Acidithiobacillus ferrooxidans ATCC 53993 excisionase family DNA-binding domain-containing protein YP_002218699.1 219051 R 380394 CDS YP_002218700.1 198282379 6876185 219948..225098 1 NC_011206.1 PFAM: domain of unknown function DUF1738; KEGG: net:Neut_2602 hypothetical protein; hypothetical protein 225098 6876185 Lferr_0235 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218700.1 219948 D 380394 CDS YP_002218701.1 198282380 6876186 225160..225798 1 NC_011206.1 hypothetical protein 225798 6876186 Lferr_0236 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218701.1 225160 D 380394 CDS YP_002218702.1 198282381 6876187 225806..226345 1 NC_011206.1 hypothetical protein 226345 6876187 Lferr_0237 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218702.1 225806 D 380394 CDS YP_002218703.1 198282382 6876188 226342..226620 1 NC_011206.1 hypothetical protein 226620 6876188 Lferr_0238 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218703.1 226342 D 380394 CDS YP_002218704.1 198282383 6876189 226631..227005 1 NC_011206.1 hypothetical protein 227005 6876189 Lferr_0239 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218704.1 226631 D 380394 CDS YP_002218705.1 198282384 6876190 226995..228848 1 NC_011206.1 KEGG: cph:Cpha266_2600 hypothetical protein; hypothetical protein 228848 6876190 Lferr_0240 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218705.1 226995 D 380394 CDS YP_002218706.1 198282385 6876191 228913..229755 1 NC_011206.1 hypothetical protein 229755 6876191 Lferr_0241 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218706.1 228913 D 380394 CDS YP_002218707.1 198282386 6876192 229752..231332 1 NC_011206.1 KEGG: rpc:RPC_3904 hypothetical protein; Type IV secretory pathway VirD2 pilin (relaxase)-like protein 231332 6876192 Lferr_0242 Acidithiobacillus ferrooxidans ATCC 53993 Type IV secretory pathway VirD2 pilin (relaxase)-like protein YP_002218707.1 229752 D 380394 CDS YP_002218708.1 198282387 6876193 231404..231856 1 NC_011206.1 hypothetical protein 231856 6876193 Lferr_0243 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218708.1 231404 D 380394 CDS YP_002218709.1 198282388 6876194 231853..232821 1 NC_011206.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: net:Neut_2555 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 232821 6876194 Lferr_0244 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer ATPase TrbB YP_002218709.1 231853 D 380394 CDS YP_002218710.1 198282389 6876195 232898..233284 1 NC_011206.1 PFAM: Conjugal transfer protein TrbC; KEGG: bcs:BCAN_B0369 P-type conjugative transfer protein TrbL; conjugal transfer protein TrbC 233284 6876195 Lferr_0245 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TrbC YP_002218710.1 232898 D 380394 CDS YP_002218711.1 198282390 6876196 233288..233665 1 NC_011206.1 KEGG: pna:Pnap_2502 conjugal transfer TrbD family protein; hypothetical protein 233665 6876196 Lferr_0246 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218711.1 233288 D 380394 CDS YP_002218712.1 198282391 6876197 233665..236187 1 NC_011206.1 PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: smd:Smed_5379 type IV secretion/conjugal transfer ATPase, VirB4 family; V transporter system protein CagE/TrbE/VirB 236187 6876197 Lferr_0247 Acidithiobacillus ferrooxidans ATCC 53993 V transporter system protein CagE/TrbE/VirB YP_002218712.1 233665 D 380394 CDS YP_002218713.1 198282392 6876198 236184..237347 1 NC_011206.1 hypothetical protein 237347 6876198 Lferr_0248 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218713.1 236184 D 380394 CDS YP_002218714.1 198282393 6876199 237429..238169 1 NC_011206.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bms:BRA0368 TrbJ protein; P-type conjugative transfer protein TrbJ 238169 6876199 Lferr_0249 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer protein TrbJ YP_002218714.1 237429 D 380394 CDS YP_002218715.1 198282394 6876200 238181..238435 1 NC_011206.1 hypothetical protein 238435 6876200 Lferr_0250 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218715.1 238181 D 380394 CDS YP_002218716.1 198282395 6876201 238449..240140 1 NC_011206.1 TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: aav:Aave_0395 TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 240140 6876201 Lferr_0251 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer protein TrbL YP_002218716.1 238449 D 380394 CDS YP_002218717.1 198282396 6876202 240217..240615 1 NC_011206.1 hypothetical protein 240615 6876202 Lferr_0252 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218717.1 240217 D 380394 CDS YP_002218718.1 198282397 6876203 240612..240953 1 NC_011206.1 PFAM: protein of unknown function DUF167; KEGG: tbd:Tbd_2620 hypothetical protein; hypothetical protein 240953 6876203 Lferr_0253 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218718.1 240612 D 380394 CDS YP_002218719.1 198282398 6876204 241275..242114 1 NC_011206.1 KEGG: tcx:Tcr_0366 TIR; TIR (Toll-Interleukin 1-resistance) domain-containing protein-like protein 242114 6876204 Lferr_0254 Acidithiobacillus ferrooxidans ATCC 53993 TIR (Toll-Interleukin 1-resistance) domain-containing protein-like protein YP_002218719.1 241275 D 380394 CDS YP_002218720.1 198282399 6876205 complement(242238..243125) 1 NC_011206.1 hypothetical protein 243125 6876205 Lferr_0255 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218720.1 242238 R 380394 CDS YP_002218721.1 198282400 6876206 243472..244140 1 NC_011206.1 KEGG: nha:Nham_4562 conjugal transfer protein; conjugal transfer protein 244140 6876206 Lferr_0256 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein YP_002218721.1 243472 D 380394 CDS YP_002218722.1 198282401 6876207 244153..245253 1 NC_011206.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pna:Pnap_2510 conjugal transfer protein TrbG/VirB9/CagX; conjugal transfer protein TrbG/VirB9/CagX 245253 6876207 Lferr_0257 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TrbG/VirB9/CagX YP_002218722.1 244153 D 380394 CDS YP_002218723.1 198282402 6876208 245255..246265 1 NC_011206.1 KEGG: cak:Caul_2034 P-type conjugative transfer protein TrbG; hypothetical protein 246265 6876208 Lferr_0258 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218723.1 245255 D 380394 CDS YP_002218724.1 198282403 6876209 246268..247677 1 NC_011206.1 PFAM: conjugation TrbI family protein; KEGG: nha:Nham_4559 conjugation TrbI-like protein; conjugation TrbI family protein 247677 6876209 Lferr_0259 Acidithiobacillus ferrooxidans ATCC 53993 conjugation TrbI family protein YP_002218724.1 246268 D 380394 CDS YP_002218725.1 198282404 6876210 247688..247990 1 NC_011206.1 hypothetical protein 247990 6876210 Lferr_0260 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218725.1 247688 D 380394 CDS YP_002218726.1 198282405 6876211 247987..248664 1 NC_011206.1 PFAM: Lytic transglycosylase catalytic; KEGG: acr:Acry_3520 lytic transglycosylase, catalytic; Lytic transglycosylase 248664 6876211 Lferr_0261 Acidithiobacillus ferrooxidans ATCC 53993 Lytic transglycosylase YP_002218726.1 247987 D 380394 CDS YP_002218727.1 198282406 6876212 248675..251104 1 NC_011206.1 PFAM: TRAG family protein; KEGG: eba:p2B19 conjugal transfer protein TraG; TRAG family protein 251104 6876212 Lferr_0262 Acidithiobacillus ferrooxidans ATCC 53993 TRAG family protein YP_002218727.1 248675 D 380394 CDS YP_002218728.1 198282407 6876213 251433..251621 1 NC_011206.1 KEGG: vei:Veis_4340 hypothetical protein; hypothetical protein 251621 6876213 Lferr_0263 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218728.1 251433 D 380394 CDS YP_002218729.1 198282408 6876214 251621..251917 1 NC_011206.1 PFAM: plasmid stabilization system; KEGG: vei:Veis_4341 plasmid stabilization system; plasmid stabilization system 251917 6876214 Lferr_0264 Acidithiobacillus ferrooxidans ATCC 53993 plasmid stabilization system YP_002218729.1 251621 D 380394 CDS YP_002218730.1 198282409 6876216 complement(253330..254967) 1 NC_011206.1 PFAM: transposase IS66; KEGG: bte:BTH_I1449 TnpC protein; transposase IS66 254967 6876216 Lferr_0266 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS66 YP_002218730.1 253330 R 380394 CDS YP_002218731.1 198282410 6876217 complement(255017..255364) 1 NC_011206.1 PFAM: IS66 Orf2 family protein; KEGG: bte:BTH_I2736 TnpB protein; IS66 Orf2 family protein 255364 6876217 Lferr_0267 Acidithiobacillus ferrooxidans ATCC 53993 IS66 Orf2 family protein YP_002218731.1 255017 R 380394 CDS YP_002218732.1 198282411 6876218 complement(255355..255687) 1 NC_011206.1 KEGG: bpt:Bpet1150 hypothetical protein; hypothetical protein 255687 6876218 Lferr_0268 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218732.1 255355 R 380394 CDS YP_002218733.1 198282412 6876220 complement(257291..258190) 1 NC_011206.1 KEGG: tvo:TVN0813 predicted phospholipase D; phospholipase D 258190 6876220 Lferr_0270 Acidithiobacillus ferrooxidans ATCC 53993 phospholipase D YP_002218733.1 257291 R 380394 CDS YP_002218734.1 198282413 6876221 complement(258518..258775) 1 NC_011206.1 hypothetical protein 258775 6876221 Lferr_0271 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218734.1 258518 R 380394 CDS YP_002218735.1 198282414 6876222 complement(258859..260097) 1 NC_011206.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sth:STH3332 ParBc, ParB-like nuclease domain; parB-like partition protein 260097 6876222 Lferr_0272 Acidithiobacillus ferrooxidans ATCC 53993 parB-like partition protein YP_002218735.1 258859 R 380394 CDS YP_002218736.1 198282415 6876223 complement(260099..260869) 1 NC_011206.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xfa:XFa0060 plasmid replication protein; cobyrinic acid ac-diamide synthase 260869 6876223 Lferr_0273 Acidithiobacillus ferrooxidans ATCC 53993 cobyrinic acid ac-diamide synthase YP_002218736.1 260099 R 380394 CDS YP_002218737.1 198282416 6876224 complement(260872..261267) 1 NC_011206.1 hypothetical protein 261267 6876224 Lferr_0274 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218737.1 260872 R 380394 CDS YP_002218738.1 198282417 6876225 complement(261316..261627) 1 NC_011206.1 hypothetical protein 261627 6876225 Lferr_0275 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218738.1 261316 R 380394 CDS YP_002218739.1 198282418 6876226 complement(261781..262371) 1 NC_011206.1 KEGG: gdi:GDI0110 putative conjugal transfer protein TraF; Type IV secretory pathway protease TraF-like protein 262371 6876226 Lferr_0276 Acidithiobacillus ferrooxidans ATCC 53993 Type IV secretory pathway protease TraF-like protein YP_002218739.1 261781 R 380394 CDS YP_002218740.1 198282419 6876227 complement(262343..262555) 1 NC_011206.1 hypothetical protein 262555 6876227 Lferr_0277 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218740.1 262343 R 380394 CDS YP_002218741.1 198282420 6876229 complement(262844..264202) 1 NC_011206.1 PFAM: TraB family protein; KEGG: nha:Nham_4542 TraB; conjugal transfer protein TraB 264202 6876229 Lferr_0279 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TraB YP_002218741.1 262844 R 380394 CDS YP_002218742.1 198282421 6876230 complement(264199..264792) 1 NC_011206.1 KEGG: dac:Daci_5760 phosphate acetyltransferase; hypothetical protein 264792 6876230 Lferr_0280 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218742.1 264199 R 380394 CDS YP_002218743.1 198282422 6876232 265276..265572 1 NC_011206.1 TIGRFAM: addiction module antidote protein; KEGG: rru:Rru_A0456 predicted transcriptional regulator; transcriptional regulator 265572 6876232 Lferr_0282 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002218743.1 265276 D 380394 CDS YP_002218744.1 198282423 6876233 complement(266349..268403) 1 NC_011206.1 KEGG: eba:p2B17 TraE protein (DNA topoisomerase); TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase III 268403 6876233 Lferr_0283 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase III YP_002218744.1 266349 R 380394 CDS YP_002218745.1 198282424 6876234 complement(268616..268861) 1 NC_011206.1 hypothetical protein 268861 6876234 Lferr_0284 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218745.1 268616 R 380394 CDS YP_002218746.1 198282425 6876235 complement(268864..269637) 1 NC_011206.1 SMART: protein phosphatase 2C domain protein; KEGG: hmo:HM1_2137 protein serine/threonine phosphatase, putative; protein serine/threonine phosphatase 269637 6876235 Lferr_0285 Acidithiobacillus ferrooxidans ATCC 53993 protein serine/threonine phosphatase YP_002218746.1 268864 R 380394 CDS YP_002218747.1 198282426 6876236 270086..270589 1 NC_011206.1 hypothetical protein 270589 6876236 Lferr_0286 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218747.1 270086 D 380394 CDS YP_002218748.1 198282427 6876237 270589..272049 1 NC_011206.1 KEGG: mca:MCA1608 hypothetical protein; hypothetical protein 272049 6876237 Lferr_0287 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218748.1 270589 D 380394 CDS YP_002218749.1 198282428 6876238 272042..273073 1 NC_011206.1 KEGG: psa:PST_3457 transcriptional factor MdcH; transcriptional factor MdcH 273073 6876238 Lferr_0288 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional factor MdcH YP_002218749.1 272042 D 380394 CDS YP_002218750.1 198282429 6876239 273095..273844 1 NC_011206.1 PFAM: protein of unknown function DUF262; KEGG: bra:BRADO6127 hypothetical protein; hypothetical protein 273844 6876239 Lferr_0289 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218750.1 273095 D 380394 CDS YP_002218751.1 198282430 6876240 273853..275316 1 NC_011206.1 hypothetical protein 275316 6876240 Lferr_0290 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218751.1 273853 D 380394 CDS YP_002218752.1 198282431 6876241 275638..276117 1 NC_011206.1 KEGG: mem:Memar_2486 hypothetical protein; hypothetical protein 276117 6876241 Lferr_0291 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218752.1 275638 D 380394 CDS YP_002218753.1 198282432 6876242 276869..277819 1 NC_011206.1 KEGG: stm:STM3845 putative inner membrane protein; hypothetical protein 277819 6876242 Lferr_0292 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218753.1 276869 D 380394 CDS YP_002218754.1 198282433 6876243 277816..278763 1 NC_011206.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mmw:Mmwyl1_2428 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 278763 6876243 Lferr_0293 Acidithiobacillus ferrooxidans ATCC 53993 RNA-directed DNA polymerase YP_002218754.1 277816 D 380394 CDS YP_002218755.1 198282434 6876244 278957..281278 1 NC_011206.1 KEGG: bxe:Bxe_A1800 predicted ATP-dependent endonuclease, OLD family; ATP-dependent endonuclease, OLD family 281278 6876244 Lferr_0294 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent endonuclease, OLD family YP_002218755.1 278957 D 380394 CDS YP_002218756.1 198282435 6876245 281275..283164 1 NC_011206.1 KEGG: bxe:Bxe_A1801 hypothetical protein; hypothetical protein 283164 6876245 Lferr_0295 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218756.1 281275 D 380394 CDS YP_002218757.1 198282436 6876246 complement(283488..283793) 1 NC_011206.1 hypothetical protein 283793 6876246 Lferr_0296 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218757.1 283488 R 380394 CDS YP_002218758.1 198282437 6876247 283968..284141 1 NC_011206.1 hypothetical protein 284141 6876247 Lferr_0297 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218758.1 283968 D 380394 CDS YP_002218759.1 198282438 6876248 284128..284658 1 NC_011206.1 hypothetical protein 284658 6876248 Lferr_0298 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218759.1 284128 D 380394 CDS YP_002218760.1 198282439 6876249 complement(284755..285138) 1 NC_011206.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: dol:Dole_0085 nitrogen-fixing NifU domain protein; nitrogen-fixing NifU domain-containing protein 285138 6876249 Lferr_0299 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen-fixing NifU domain-containing protein YP_002218760.1 284755 R 380394 CDS YP_002218761.1 198282440 6876250 complement(285144..285884) 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: eba:ebA3368 pteridine reductase; short-chain dehydrogenase/reductase SDR 285884 6876250 Lferr_0300 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002218761.1 285144 R 380394 CDS YP_002218762.1 198282441 6876251 285894..287021 1 NC_011206.1 PFAM: protein of unknown function DUF185; KEGG: tbd:Tbd_2702 hypothetical protein; hypothetical protein 287021 6876251 Lferr_0301 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218762.1 285894 D 380394 CDS YP_002218763.1 198282442 6876252 complement(287124..288059) 1 NC_011206.1 KEGG: dge:Dgeo_0583 membrane protein; hypothetical protein 288059 6876252 Lferr_0302 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218763.1 287124 R 380394 CDS YP_002218764.1 198282443 6876253 288537..289856 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 289856 6876253 Lferr_0303 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218764.1 288537 D 380394 CDS YP_002218765.1 198282444 6876254 289978..290292 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 290292 6876254 Lferr_0304 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002218765.1 289978 D 380394 CDS YP_002218766.1 198282445 6876255 complement(290591..291982) 1 NC_011206.1 KEGG: pfo:Pfl_1813 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 291982 6876255 Lferr_0305 Acidithiobacillus ferrooxidans ATCC 53993 oxygen-independent coproporphyrinogen III oxidase YP_002218766.1 290591 R 380394 CDS YP_002218767.1 198282446 6876256 complement(292020..292952) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mca:MCA2261 transcriptional regulator MetR; LysR family transcriptional regulator 292952 6876256 Lferr_0306 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002218767.1 292020 R 380394 CDS YP_002218768.1 198282447 6876257 293188..294030 1 NC_011206.1 KEGG: acr:Acry_0114 hypothetical protein; hypothetical protein 294030 6876257 Lferr_0307 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218768.1 293188 D 380394 CDS YP_002218769.1 198282448 6876258 complement(294198..294512) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 294512 6876258 Lferr_0308 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002218769.1 294198 R 380394 CDS YP_002218770.1 198282449 6876259 complement(294634..295953) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 295953 6876259 Lferr_0309 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218770.1 294634 R 380394 CDS YP_002218771.1 198282450 6876260 296038..296586 1 NC_011206.1 KEGG: acr:Acry_0114 hypothetical protein; hypothetical protein 296586 6876260 Lferr_0310 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218771.1 296038 D 380394 CDS YP_002218772.1 198282451 6876261 complement(296660..297790) 1 NC_011206.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: aeh:Mlg_2792 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 297790 6876261 Lferr_0311 Acidithiobacillus ferrooxidans ATCC 53993 lipopolysaccharide heptosyltransferase II YP_002218772.1 296660 R 380394 CDS YP_002218773.1 198282452 6876262 complement(297792..298556) 1 NC_011206.1 KEGG: olu:OSTLU_40884 predicted protein; hypothetical protein 298556 6876262 Lferr_0312 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218773.1 297792 R 380394 CDS YP_002218774.1 198282453 6876263 complement(298560..299945) 1 NC_011206.1 PFAM: FAD linked oxidase domain protein; KEGG: tbd:Tbd_1998 oxidoreductase, FAD-binding; FAD linked oxidase domain-containing protein 299945 6876263 Lferr_0313 Acidithiobacillus ferrooxidans ATCC 53993 FAD linked oxidase domain-containing protein YP_002218774.1 298560 R 380394 CDS YP_002218775.1 198282454 6876264 complement(299942..301018) 1 NC_011206.1 TIGRFAM: phosphoheptose isomerase; cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: sugar isomerase (SIS); cytidylyltransferase; KEGG: reh:H16_A3578 sedoheptulose 7-phosphate isomerase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 301018 6876264 Lferr_0314 Acidithiobacillus ferrooxidans ATCC 53993 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_002218775.1 299942 R 380394 CDS YP_002218776.1 198282455 6876265 complement(301015..301380) 1 NC_011206.1 PFAM: protein of unknown function UPF0102; KEGG: ppg:PputGB1_4524 protein of unknown function UPF0102; hypothetical protein 301380 6876265 Lferr_0315 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218776.1 301015 R 380394 CDS YP_002218777.1 198282456 6876266 complement(301384..303222) 1 NC_011206.1 KEGG: noc:Noc_0356 LppC putative lipoprotein; lipoprotein-like protein 303222 6876266 Lferr_0316 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein-like protein YP_002218777.1 301384 R 380394 CDS YP_002218778.1 198282457 6876267 303292..304167 1 NC_011206.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eba:ebA1457 conserved hypothetical protein, predicted methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 304167 6876267 Lferr_0317 Acidithiobacillus ferrooxidans ATCC 53993 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002218778.1 303292 D 380394 CDS YP_002218779.1 198282458 6876269 complement(304564..304680) 1 NC_011206.1 hypothetical protein 304680 6876269 Lferr_0318 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218779.1 304564 R 380394 CDS YP_002218780.1 198282459 6876270 complement(304697..304942) 1 NC_011206.1 KEGG: dol:Dole_3056 hypothetical protein; hypothetical protein 304942 6876270 Lferr_0319 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218780.1 304697 R 380394 CDS YP_002218781.1 198282460 6876271 complement(305214..305723) 1 NC_011206.1 hypothetical protein 305723 6876271 Lferr_0320 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218781.1 305214 R 380394 CDS YP_002218782.1 198282461 6876272 complement(305753..306547) 1 NC_011206.1 KEGG: eba:ebA4197 putative transferase; transferase 306547 6876272 Lferr_0321 Acidithiobacillus ferrooxidans ATCC 53993 transferase YP_002218782.1 305753 R 380394 CDS YP_002218783.1 198282462 6876273 complement(306662..307060) 1 NC_011206.1 PFAM: Rhodanese domain protein; KEGG: tbd:Tbd_0235 rhodanese-like protein; rhodanese domain-containing protein 307060 6876273 Lferr_0322 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002218783.1 306662 R 380394 CDS YP_002218784.1 198282463 6876274 complement(307229..307432) 1 NC_011206.1 hypothetical protein 307432 6876274 Lferr_0323 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218784.1 307229 R 380394 CDS YP_002218785.1 198282464 6876275 complement(307443..308282) 1 NC_011206.1 SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; ATPase AAA 308282 6876275 Lferr_0324 Acidithiobacillus ferrooxidans ATCC 53993 ATPase AAA YP_002218785.1 307443 R 380394 CDS YP_002218786.1 198282465 6876276 complement(308286..308813) 1 NC_011206.1 KEGG: bxe:Bxe_C0710 putative integrase; integrase 308813 6876276 Lferr_0325 Acidithiobacillus ferrooxidans ATCC 53993 integrase YP_002218786.1 308286 R 380394 CDS YP_002218787.1 198282466 6876277 309036..310280 1 NC_011206.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pol:Bpro_0711 phage integrase; integrase family protein 310280 6876277 Lferr_0326 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002218787.1 309036 D 380394 CDS YP_002218788.1 198282467 6876278 310277..311218 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0712 phage integrase; integrase family protein 311218 6876278 Lferr_0327 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002218788.1 310277 D 380394 CDS YP_002218789.1 198282468 6876279 311211..312209 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0713 phage integrase; integrase family protein 312209 6876279 Lferr_0328 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002218789.1 311211 D 380394 CDS YP_002218790.1 198282469 6876280 complement(312284..313144) 1 NC_011206.1 KEGG: rme:Rmet_6335 integrase, catalytic region; integrase catalytic subunit 313144 6876280 Lferr_0329 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002218790.1 312284 R 380394 CDS YP_002218791.1 198282470 6876281 complement(313278..313826) 1 NC_011206.1 KEGG: bxe:Bxe_C0711 hypothetical protein; hypothetical protein 313826 6876281 Lferr_0330 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218791.1 313278 R 380394 CDS YP_002218792.1 198282471 6876282 complement(313968..314345) 1 NC_011206.1 PFAM: protein of unknown function DUF423; KEGG: noc:Noc_2079 protein of unknown function DUF423; hypothetical protein 314345 6876282 Lferr_0331 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218792.1 313968 R 380394 CDS YP_002218793.1 198282472 6876283 314534..315226 1 NC_011206.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: har:HEAR1441 conserved hypothetical protein, putative membrane protein; hypothetical protein 315226 6876283 Lferr_0332 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218793.1 314534 D 380394 CDS YP_002218794.1 198282473 6876284 315478..316134 1 NC_011206.1 PFAM: major intrinsic protein; KEGG: bca:BCE_A0165 MIP family channel protein; major intrinsic protein 316134 6876284 Lferr_0333 Acidithiobacillus ferrooxidans ATCC 53993 major intrinsic protein YP_002218794.1 315478 D 380394 CDS YP_002218795.1 198282474 6876285 316302..316907 1 NC_011206.1 PFAM: Phosphoglycerate mutase; KEGG: sma:SAV5245 mutase; phosphoglycerate mutase 316907 6876285 Lferr_0334 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglycerate mutase YP_002218795.1 316302 D 380394 CDS YP_002218796.1 198282475 6876286 complement(316938..317774) 1 NC_011206.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 317774 6876286 Lferr_0335 Acidithiobacillus ferrooxidans ATCC 53993 spermidine synthase YP_002218796.1 316938 R 380394 CDS YP_002218797.1 198282476 6876287 complement(317890..318291) 1 NC_011206.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: lbl:LBL_4244 adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase 318291 6876287 Lferr_0336 Acidithiobacillus ferrooxidans ATCC 53993 S-adenosylmethionine decarboxylase YP_002218797.1 317890 R 380394 CDS YP_002218798.1 198282477 6876288 318611..319435 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2223 ABC transporter related; ABC transporter-like protein 319435 6876288 Lferr_0337 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002218798.1 318611 D 380394 CDS YP_002218799.1 198282478 6876289 319438..320220 1 NC_011206.1 PFAM: protein of unknown function DUF140; KEGG: nmu:Nmul_A2748 protein of unknown function DUF140; hypothetical protein 320220 6876289 Lferr_0338 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218799.1 319438 D 380394 CDS YP_002218800.1 198282479 6876290 320235..320693 1 NC_011206.1 PFAM: Mammalian cell entry related domain protein; KEGG: rme:Rmet_3257 mammalian cell entry related; mammalian cell entry domain-containing protein 320693 6876290 Lferr_0339 Acidithiobacillus ferrooxidans ATCC 53993 mammalian cell entry domain-containing protein YP_002218800.1 320235 D 380394 CDS YP_002218801.1 198282480 6876291 320710..321348 1 NC_011206.1 PFAM: toluene tolerance family protein; KEGG: eba:ebA2206 putative toluene tolerance protein; toluene tolerance family protein 321348 6876291 Lferr_0340 Acidithiobacillus ferrooxidans ATCC 53993 toluene tolerance family protein YP_002218801.1 320710 D 380394 CDS YP_002218802.1 198282481 6876292 321345..321662 1 NC_011206.1 KEGG: spe:Spro_4356 anti-sigma-factor antagonist; hypothetical protein 321662 6876292 Lferr_0341 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218802.1 321345 D 380394 CDS YP_002218803.1 198282482 6876293 321655..322575 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA1306 ATP-binding ABC transporter protein; ABC transporter-like protein 322575 6876293 Lferr_0342 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002218803.1 321655 D 380394 CDS YP_002218804.1 198282483 6876294 322578..322841 1 NC_011206.1 PFAM: RNA-binding S4 domain protein; KEGG: sth:STH3229 hypothetical protein; RNA-binding S4 domain-containing protein 322841 6876294 Lferr_0343 Acidithiobacillus ferrooxidans ATCC 53993 RNA-binding S4 domain-containing protein YP_002218804.1 322578 D 380394 CDS YP_002218805.1 198282484 6876295 322838..323839 1 NC_011206.1 KEGG: eba:ebA1139 pyridoxal phosphate biosynthesis protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 323839 6876295 Lferr_0344 Acidithiobacillus ferrooxidans ATCC 53993 4-hydroxythreonine-4-phosphate dehydrogenase YP_002218805.1 322838 D 380394 CDS YP_002218806.1 198282485 6876296 complement(323866..324420) 1 NC_011206.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: xac:XAC2564 hypothetical protein; HNH endonuclease 324420 6876296 Lferr_0345 Acidithiobacillus ferrooxidans ATCC 53993 HNH endonuclease YP_002218806.1 323866 R 380394 CDS YP_002218807.1 198282486 6876297 324483..325289 1 NC_011206.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: aeh:Mlg_0267 dimethyladenosine transferase; dimethyladenosine transferase 325289 6876297 Lferr_0346 Acidithiobacillus ferrooxidans ATCC 53993 dimethyladenosine transferase YP_002218807.1 324483 D 380394 CDS YP_002218808.1 198282487 6876298 325286..325753 1 NC_011206.1 KEGG: hau:Haur_1465 protein of unknown function DUF1790; hypothetical protein 325753 6876298 Lferr_0347 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218808.1 325286 D 380394 CDS YP_002218809.1 198282488 6876299 complement(325719..326552) 1 NC_011206.1 PFAM: Sporulation domain protein; KEGG: cvi:CV_3999 hypothetical protein; sporulation domain-containing protein 326552 6876299 Lferr_0348 Acidithiobacillus ferrooxidans ATCC 53993 sporulation domain-containing protein YP_002218809.1 325719 R 380394 CDS YP_002218810.1 198282489 6876300 complement(326560..328299) 1 NC_011206.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 328299 argS 6876300 argS Acidithiobacillus ferrooxidans ATCC 53993 arginyl-tRNA synthetase YP_002218810.1 326560 R 380394 CDS YP_002218811.1 198282490 6876301 complement(328439..330001) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_2030 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 330001 6876301 Lferr_0350 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002218811.1 328439 R 380394 CDS YP_002218812.1 198282491 6876302 330092..330985 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB4177 putative transcriptional regulator; LysR family transcriptional regulator 330985 6876302 Lferr_0351 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002218812.1 330092 D 380394 CDS YP_002218813.1 198282492 6876303 complement(331001..331912) 1 NC_011206.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: noc:Noc_2934 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific 331912 6876303 Lferr_0352 Acidithiobacillus ferrooxidans ATCC 53993 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific YP_002218813.1 331001 R 380394 CDS YP_002218814.1 198282493 6876304 complement(331913..332680) 1 NC_011206.1 KEGG: mth:MTH212 exodeoxyribonuclease; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 332680 6876304 Lferr_0353 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease III Xth YP_002218814.1 331913 R 380394 CDS YP_002218815.1 198282494 6876305 complement(332687..332971) 1 NC_011206.1 hypothetical protein 332971 6876305 Lferr_0354 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218815.1 332687 R 380394 CDS YP_002218816.1 198282495 6876306 complement(332992..333849) 1 NC_011206.1 PFAM: protein of unknown function DUF519; KEGG: mag:amb0584 protein involved in catabolism of external DNA; hypothetical protein 333849 6876306 Lferr_0355 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218816.1 332992 R 380394 CDS YP_002218817.1 198282496 6876307 333941..334543 1 NC_011206.1 PFAM: Glutathione S-transferase domain; KEGG: cvi:CV_3306 probable glutathione S-transferase; glutathione S-transferase domain 334543 6876307 Lferr_0356 Acidithiobacillus ferrooxidans ATCC 53993 glutathione S-transferase domain YP_002218817.1 333941 D 380394 CDS YP_002218818.1 198282497 6876308 334549..335322 1 NC_011206.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: lpn:lpg0649 exodeoxyribonuclease III; exodeoxyribonuclease III Xth 335322 6876308 Lferr_0357 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease III Xth YP_002218818.1 334549 D 380394 CDS YP_002218819.1 198282498 6876309 335319..336332 1 NC_011206.1 PFAM: ferrochelatase; KEGG: ajs:Ajs_1652 ferrochelatase; ferrochelatase 336332 6876309 Lferr_0358 Acidithiobacillus ferrooxidans ATCC 53993 ferrochelatase YP_002218819.1 335319 D 380394 CDS YP_002218820.1 198282499 6876310 336400..336888 1 NC_011206.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pfo:Pfl_0882 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 336888 6876310 Lferr_0359 Acidithiobacillus ferrooxidans ATCC 53993 FKBP-type peptidylprolyl isomerase YP_002218820.1 336400 D 380394 CDS YP_002218821.1 198282500 6876311 336955..338118 1 NC_011206.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 338118 anmK 6876311 anmK Acidithiobacillus ferrooxidans ATCC 53993 anhydro-N-acetylmuramic acid kinase YP_002218821.1 336955 D 380394 CDS YP_002218822.1 198282501 6876312 338099..338995 1 NC_011206.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: gsu:GSU1490 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 338995 6876312 Lferr_0361 Acidithiobacillus ferrooxidans ATCC 53993 shikimate 5-dehydrogenase YP_002218822.1 338099 D 380394 CDS YP_002218823.1 198282502 6876313 338965..340674 1 NC_011206.1 KEGG: aeh:Mlg_2079 type IV-A pilus assembly ATPase PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type IV-A pilus assembly ATPase PilB 340674 6876313 Lferr_0362 Acidithiobacillus ferrooxidans ATCC 53993 type IV-A pilus assembly ATPase PilB YP_002218823.1 338965 D 380394 CDS YP_002218824.1 198282503 6876314 340814..342406 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xft:PD1929 two-component system, sensor protein; signal transduction histidine kinase, nitrogen specific, NtrB 342406 6876314 Lferr_0363 Acidithiobacillus ferrooxidans ATCC 53993 signal transduction histidine kinase, nitrogen specific, NtrB YP_002218824.1 340814 D 380394 CDS YP_002218825.1 198282504 6876315 342399..343754 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: pmy:Pmen_0965 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 343754 6876315 Lferr_0364 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002218825.1 342399 D 380394 CDS YP_002218826.1 198282505 6876316 343751..344551 1 NC_011206.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: ppw:PputW619_4538 prepilin peptidase; peptidase A24A domain-containing protein 344551 6876316 Lferr_0365 Acidithiobacillus ferrooxidans ATCC 53993 peptidase A24A domain-containing protein YP_002218826.1 343751 D 380394 CDS YP_002218827.1 198282506 6876317 344552..345166 1 NC_011206.1 KEGG: reh:H16_A3258 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 345166 6876317 Lferr_0366 Acidithiobacillus ferrooxidans ATCC 53993 dephospho-CoA kinase YP_002218827.1 344552 D 380394 CDS YP_002218828.1 198282507 6876318 345285..346037 1 NC_011206.1 PFAM: protein of unknown function DUF1342; KEGG: pat:Patl_3340 hypothetical protein; hypothetical protein 346037 6876318 Lferr_0367 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218828.1 345285 D 380394 CDS YP_002218829.1 198282508 6876319 346068..347087 1 NC_011206.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 347087 6876319 Lferr_0368 Acidithiobacillus ferrooxidans ATCC 53993 fructose-1,6-bisphosphatase YP_002218829.1 346068 D 380394 CDS YP_002218830.1 198282509 6876320 347282..347707 1 NC_011206.1 PFAM: Stringent starvation protein B; KEGG: psa:PST_1067 stringent starvation protein B; stringent starvation protein B 347707 6876320 Lferr_0369 Acidithiobacillus ferrooxidans ATCC 53993 stringent starvation protein B YP_002218830.1 347282 D 380394 CDS YP_002218831.1 198282510 6876321 347719..348369 1 NC_011206.1 PFAM: Lytic transglycosylase catalytic; KEGG: sat:SYN_02783 soluble lytic murein transglycosylase; Lytic transglycosylase 348369 6876321 Lferr_0370 Acidithiobacillus ferrooxidans ATCC 53993 Lytic transglycosylase YP_002218831.1 347719 D 380394 CDS YP_002218832.1 198282511 6876322 complement(348351..348593) 1 NC_011206.1 PFAM: helix-turn-helix Fis-type; KEGG: rme:Rmet_0428 DNA-binding protein fis; Fis family transcriptional regulator 348593 6876322 Lferr_0371 Acidithiobacillus ferrooxidans ATCC 53993 Fis family transcriptional regulator YP_002218832.1 348351 R 380394 CDS YP_002218833.1 198282512 6876323 complement(348605..349237) 1 NC_011206.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: cvi:CV_0983 probable transmembrane protein; hypothetical protein 349237 6876323 Lferr_0372 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218833.1 348605 R 380394 CDS YP_002218834.1 198282513 6876324 complement(349240..350118) 1 NC_011206.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: putative RNA methylase; ribosomal L11 methyltransferase; KEGG: psa:PST_3275 ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 350118 6876324 Lferr_0373 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L11 methyltransferase YP_002218834.1 349240 R 380394 CDS YP_002218835.1 198282514 6876325 complement(350115..351461) 1 NC_011206.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mms:mma_2972 biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 351461 6876325 Lferr_0374 Acidithiobacillus ferrooxidans ATCC 53993 acetyl-CoA carboxylase, biotin carboxylase YP_002218835.1 350115 R 380394 CDS YP_002218836.1 198282515 6876326 complement(351463..351933) 1 NC_011206.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: nmu:Nmul_A2753 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 351933 6876326 Lferr_0375 Acidithiobacillus ferrooxidans ATCC 53993 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002218836.1 351463 R 380394 CDS YP_002218837.1 198282516 6876327 complement(351953..352414) 1 NC_011206.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 352414 6876327 Lferr_0376 Acidithiobacillus ferrooxidans ATCC 53993 3-dehydroquinate dehydratase YP_002218837.1 351953 R 380394 CDS YP_002218838.1 198282517 6876328 complement(352582..352959) 1 NC_011206.1 PFAM: helix-turn-helix HxlR type; KEGG: sse:Ssed_2189 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 352959 6876328 Lferr_0377 Acidithiobacillus ferrooxidans ATCC 53993 HxlR family transcriptional regulator YP_002218838.1 352582 R 380394 CDS YP_002218839.1 198282518 6876329 353296..354153 1 NC_011206.1 KEGG: har:HEAR2925 Conserved hypothetical protein. putative conserved domain; hypothetical protein 354153 6876329 Lferr_0378 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218839.1 353296 D 380394 CDS YP_002218840.1 198282519 6876330 complement(354275..355438) 1 NC_011206.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: hch:HCH_05877 cell division protein FtsZ; cell division protein FtsZ 355438 6876330 Lferr_0379 Acidithiobacillus ferrooxidans ATCC 53993 cell division protein FtsZ YP_002218840.1 354275 R 380394 CDS YP_002218841.1 198282520 6876331 complement(355497..356765) 1 NC_011206.1 PFAM: cell division protein FtsA; KEGG: psa:PST_1086 cell division protein FtsA; cell division protein FtsA 356765 6876331 Lferr_0380 Acidithiobacillus ferrooxidans ATCC 53993 cell division protein FtsA YP_002218841.1 355497 R 380394 CDS YP_002218842.1 198282521 6876332 complement(356796..357638) 1 NC_011206.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: xac:XAC0782 cell division protein; polypeptide-transport-associated domain-containing protein 357638 6876332 Lferr_0381 Acidithiobacillus ferrooxidans ATCC 53993 polypeptide-transport-associated domain-containing protein YP_002218842.1 356796 R 380394 CDS YP_002218843.1 198282522 6876333 complement(357631..358557) 1 NC_011206.1 KEGG: eba:ebA1442 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 358557 6876333 Lferr_0382 Acidithiobacillus ferrooxidans ATCC 53993 D-alanine--D-alanine ligase YP_002218843.1 357631 R 380394 CDS YP_002218844.1 198282523 6876334 complement(358550..359437) 1 NC_011206.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 359437 murB 6876334 murB Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002218844.1 358550 R 380394 CDS YP_002218845.1 198282524 6876335 complement(359434..360828) 1 NC_011206.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aeh:Mlg_2192 UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 360828 6876335 Lferr_0384 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylmuramate--L-alanine ligase YP_002218845.1 359434 R 380394 CDS YP_002218846.1 198282525 6876336 complement(360821..361903) 1 NC_011206.1 KEGG: noc:Noc_2861 N-acetylglucosaminyltransferase, MurG; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 361903 6876336 Lferr_0385 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_002218846.1 360821 R 380394 CDS YP_002218847.1 198282526 6876337 complement(361896..363068) 1 NC_011206.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: nmu:Nmul_A2495 cell cycle protein; cell division protein FtsW 363068 6876337 Lferr_0386 Acidithiobacillus ferrooxidans ATCC 53993 cell division protein FtsW YP_002218847.1 361896 R 380394 CDS YP_002218848.1 198282527 6876338 complement(363065..364411) 1 NC_011206.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aeh:Mlg_2195 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 364411 6876338 Lferr_0387 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002218848.1 363065 R 380394 CDS YP_002218849.1 198282528 6876339 complement(364413..365495) 1 NC_011206.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 365495 mraY 6876339 mraY Acidithiobacillus ferrooxidans ATCC 53993 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002218849.1 364413 R 380394 CDS YP_002218850.1 198282529 6876340 complement(365495..366847) 1 NC_011206.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aeh:Mlg_2197 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 366847 6876340 Lferr_0389 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_002218850.1 365495 R 380394 CDS YP_002218851.1 198282530 6876341 complement(366844..368295) 1 NC_011206.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cvi:CV_4348 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 368295 6876341 Lferr_0390 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylmuramyl tripeptide synthetase YP_002218851.1 366844 R 380394 CDS YP_002218852.1 198282531 6876342 complement(368282..370066) 1 NC_011206.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: psa:PST_1076 penicillin-binding protein 3; peptidoglycan glycosyltransferase 370066 6876342 Lferr_0391 Acidithiobacillus ferrooxidans ATCC 53993 peptidoglycan glycosyltransferase YP_002218852.1 368282 R 380394 CDS YP_002218853.1 198282532 6876343 complement(370063..370326) 1 NC_011206.1 PFAM: cell division protein FtsL; KEGG: azo:azo0877 putative cell division protein FtsL; cell division protein FtsL 370326 6876343 Lferr_0392 Acidithiobacillus ferrooxidans ATCC 53993 cell division protein FtsL YP_002218853.1 370063 R 380394 CDS YP_002218854.1 198282533 6876344 complement(370316..371281) 1 NC_011206.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: tbd:Tbd_0111 methyltransferase; S-adenosyl-methyltransferase MraW 371281 mraW 6876344 mraW Acidithiobacillus ferrooxidans ATCC 53993 S-adenosyl-methyltransferase MraW YP_002218854.1 370316 R 380394 CDS YP_002218855.1 198282534 6876345 complement(371278..371733) 1 NC_011206.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: aeh:Mlg_2202 MraZ protein; MraZ protein 371733 6876345 Lferr_0394 Acidithiobacillus ferrooxidans ATCC 53993 MraZ protein YP_002218855.1 371278 R 380394 CDS YP_002218856.1 198282535 6876347 372549..372815 1 NC_011206.1 hypothetical protein 372815 6876347 Lferr_0395 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218856.1 372549 D 380394 CDS YP_002218857.1 198282536 6876348 complement(372760..374130) 1 NC_011206.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: rrs:RoseRS_1930 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; polynucleotide adenylyltransferase 374130 6876348 Lferr_0396 Acidithiobacillus ferrooxidans ATCC 53993 polynucleotide adenylyltransferase YP_002218857.1 372760 R 380394 CDS YP_002218858.1 198282537 6876349 complement(374136..375878) 1 NC_011206.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rxy:Rxyl_2060 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 375878 6876349 Lferr_0397 Acidithiobacillus ferrooxidans ATCC 53993 AMP-dependent synthetase and ligase YP_002218858.1 374136 R 380394 CDS YP_002218859.1 198282538 6876350 complement(375880..376500) 1 NC_011206.1 PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: cvi:CV_4005 stringent starvation protein A; glutathione S-transferase domain 376500 6876350 Lferr_0398 Acidithiobacillus ferrooxidans ATCC 53993 glutathione S-transferase domain YP_002218859.1 375880 R 380394 CDS YP_002218860.1 198282539 6876351 376790..377704 1 NC_011206.1 PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: hha:Hhal_2084 UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 377704 6876351 Lferr_0399 Acidithiobacillus ferrooxidans ATCC 53993 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_002218860.1 376790 D 380394 CDS YP_002218861.1 198282540 6876352 complement(377644..378156) 1 NC_011206.1 hypothetical protein 378156 6876352 Lferr_0400 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218861.1 377644 R 380394 CDS YP_002218862.1 198282541 6876353 378209..380953 1 NC_011206.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: noc:Noc_2851 SecA protein; preprotein translocase subunit SecA 380953 6876353 Lferr_0401 Acidithiobacillus ferrooxidans ATCC 53993 preprotein translocase subunit SecA YP_002218862.1 378209 D 380394 CDS YP_002218863.1 198282542 6876354 380963..382189 1 NC_011206.1 KEGG: reh:H16_A3263 N-acetylglutamate synthase; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 382189 6876354 Lferr_0402 Acidithiobacillus ferrooxidans ATCC 53993 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_002218863.1 380963 D 380394 CDS YP_002218864.1 198282543 6876355 382189..383178 1 NC_011206.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: tbd:Tbd_0027 hypothetical protein; mutator MutT protein 383178 6876355 Lferr_0403 Acidithiobacillus ferrooxidans ATCC 53993 mutator MutT protein YP_002218864.1 382189 D 380394 CDS YP_002218865.1 198282544 6876356 383179..384141 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_4198 glycosyl transferase family 2; family 2 glycosyl transferase 384141 6876356 Lferr_0404 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002218865.1 383179 D 380394 CDS YP_002218866.1 198282545 6876357 384138..384854 1 NC_011206.1 PFAM: polysaccharide deacetylase; KEGG: xfa:XF0878 hypothetical protein; polysaccharide deacetylase 384854 6876357 Lferr_0405 Acidithiobacillus ferrooxidans ATCC 53993 polysaccharide deacetylase YP_002218866.1 384138 D 380394 CDS YP_002218867.1 198282546 6876358 384851..385930 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: xfm:Xfasm12_1970 lipopolysaccharide biosynthesis protein; group 1 glycosyl transferase 385930 6876358 Lferr_0406 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002218867.1 384851 D 380394 CDS YP_002218868.1 198282547 6876359 386185..387576 1 NC_011206.1 PFAM: glycosyl transferase family 39; KEGG: aae:aq_1236 hypothetical protein; glycosyl transferase 387576 6876359 Lferr_0407 Acidithiobacillus ferrooxidans ATCC 53993 glycosyl transferase YP_002218868.1 386185 D 380394 CDS YP_002218869.1 198282548 6876360 387654..388877 1 NC_011206.1 PFAM: O-antigen polymerase; KEGG: bcm:Bcenmc03_2333 O-antigen polymerase; O-antigen polymerase 388877 6876360 Lferr_0408 Acidithiobacillus ferrooxidans ATCC 53993 O-antigen polymerase YP_002218869.1 387654 D 380394 CDS YP_002218870.1 198282549 6876361 388926..389873 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0463 glycosyl transferase family 2; family 2 glycosyl transferase 389873 6876361 Lferr_0409 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002218870.1 388926 D 380394 CDS YP_002218871.1 198282550 6876362 389898..390671 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: cvi:CV_0228 probable beta-1,4-glucosyltransferase; family 2 glycosyl transferase 390671 6876362 Lferr_0410 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002218871.1 389898 D 380394 CDS YP_002218872.1 198282551 6876363 390671..391723 1 NC_011206.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: psp:PSPPH_0511 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 391723 6876363 Lferr_0411 Acidithiobacillus ferrooxidans ATCC 53993 lipopolysaccharide heptosyltransferase I YP_002218872.1 390671 D 380394 CDS YP_002218873.1 198282552 6876364 391720..392400 1 NC_011206.1 KEGG: mmr:Mmar10_0635 hypothetical protein; protein tyrosine/serine phosphatase 392400 6876364 Lferr_0412 Acidithiobacillus ferrooxidans ATCC 53993 protein tyrosine/serine phosphatase YP_002218873.1 391720 D 380394 CDS YP_002218874.1 198282553 6876365 392397..393650 1 NC_011206.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: psa:PST_3818 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 393650 6876365 Lferr_0413 Acidithiobacillus ferrooxidans ATCC 53993 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_002218874.1 392397 D 380394 CDS YP_002218875.1 198282554 6876366 complement(393656..394564) 1 NC_011206.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: maq:Maqu_0793 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 394564 6876366 Lferr_0414 Acidithiobacillus ferrooxidans ATCC 53993 lipid A biosynthesis acyltransferase YP_002218875.1 393656 R 380394 CDS YP_002218876.1 198282555 6876367 complement(394665..395822) 1 NC_011206.1 PFAM: aminotransferase class I and II; KEGG: bld:BLi03326 PatB; class I/II aminotransferase 395822 6876367 Lferr_0415 Acidithiobacillus ferrooxidans ATCC 53993 class I/II aminotransferase YP_002218876.1 394665 R 380394 CDS YP_002218877.1 198282556 6876368 complement(395819..397927) 1 NC_011206.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: net:Neut_0838 protein of unknown function DUF323; hypothetical protein 397927 6876368 Lferr_0416 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218877.1 395819 R 380394 CDS YP_002218878.1 198282557 6876369 complement(397971..398486) 1 NC_011206.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: spe:Spro_4812 RNA methyltransferase, TrmH family, group 2; TrmH family RNA methyltransferase 398486 6876369 Lferr_0417 Acidithiobacillus ferrooxidans ATCC 53993 TrmH family RNA methyltransferase YP_002218878.1 397971 R 380394 CDS YP_002218879.1 198282558 6876370 complement(398497..399210) 1 NC_011206.1 KEGG: noc:Noc_2102 competence protein F; competence protein F 399210 6876370 Lferr_0418 Acidithiobacillus ferrooxidans ATCC 53993 competence protein F YP_002218879.1 398497 R 380394 CDS YP_002218880.1 198282559 6876371 399322..400491 1 NC_011206.1 KEGG: aeh:Mlg_2435 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 400491 6876371 Lferr_0419 Acidithiobacillus ferrooxidans ATCC 53993 8-amino-7-oxononanoate synthase YP_002218880.1 399322 D 380394 CDS YP_002218881.1 198282560 6876372 400488..401252 1 NC_011206.1 TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: tbd:Tbd_0321 BioH; bioH protein 401252 6876372 Lferr_0420 Acidithiobacillus ferrooxidans ATCC 53993 bioH protein YP_002218881.1 400488 D 380394 CDS YP_002218882.1 198282561 6876373 401249..402127 1 NC_011206.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_2433 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 402127 6876373 Lferr_0421 Acidithiobacillus ferrooxidans ATCC 53993 biotin biosynthesis protein BioC YP_002218882.1 401249 D 380394 CDS YP_002218883.1 198282562 6876374 402124..402828 1 NC_011206.1 TIGRFAM: dethiobiotin synthase; KEGG: dar:Daro_2900 dethiobiotin synthase; dethiobiotin synthase 402828 6876374 Lferr_0422 Acidithiobacillus ferrooxidans ATCC 53993 dethiobiotin synthase YP_002218883.1 402124 D 380394 CDS YP_002218884.1 198282563 6876375 402942..403838 1 NC_011206.1 PFAM: peptidase M48 Ste24p; KEGG: nme:NMB0822 heat shock protein HtpX; peptidase M48 Ste24p 403838 6876375 Lferr_0423 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M48 Ste24p YP_002218884.1 402942 D 380394 CDS YP_002218885.1 198282564 6876376 403891..404610 1 NC_011206.1 KEGG: tbd:Tbd_2043 leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 404610 6876376 Lferr_0424 Acidithiobacillus ferrooxidans ATCC 53993 leucyl/phenylalanyl-tRNA/protein transferase YP_002218885.1 403891 D 380394 CDS YP_002218886.1 198282565 6876377 404613..405323 1 NC_011206.1 PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: dar:Daro_1195 arginyl-tRNA-protein transferase; arginyltransferase 405323 6876377 Lferr_0425 Acidithiobacillus ferrooxidans ATCC 53993 arginyltransferase YP_002218886.1 404613 D 380394 CDS YP_002218887.1 198282566 6876378 405320..406099 1 NC_011206.1 PFAM: conserved hypothetical protein; KEGG: tte:TTE0321 predicted permease; hypothetical protein 406099 6876378 Lferr_0426 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218887.1 405320 D 380394 CDS YP_002218888.1 198282567 6876379 406106..406711 1 NC_011206.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 406711 6876379 Lferr_0427 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease T YP_002218888.1 406106 D 380394 CDS YP_002218889.1 198282568 6876380 406787..407803 1 NC_011206.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nmu:Nmul_A2686 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 407803 6876380 Lferr_0428 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002218889.1 406787 D 380394 CDS YP_002218890.1 198282569 6876381 407866..408234 1 NC_011206.1 KEGG: lma:LmjF23.0640 hypothetical protein, conserved Pfam: TolA OAD_gamma MAP7 Staph_haemo PROSITE: ARG_RICH GLU_RICH; hypothetical protein 408234 6876381 Lferr_0429 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218890.1 407866 D 380394 CDS YP_002218891.1 198282570 6876382 complement(408323..408562) 1 NC_011206.1 KEGG: sil:SPO0961 hypothetical protein; hypothetical protein 408562 6876382 Lferr_0430 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218891.1 408323 R 380394 CDS YP_002218892.1 198282571 6876383 complement(408627..409565) 1 NC_011206.1 KEGG: bur:Bcep18194_C6769 hypothetical protein; hypothetical protein 409565 6876383 Lferr_0431 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218892.1 408627 R 380394 CDS YP_002218893.1 198282572 6876384 409756..410400 1 NC_011206.1 PFAM: regulatory protein TetR; KEGG: noc:Noc_0199 regulatory protein, TetR family; TetR family transcriptional regulator 410400 6876384 Lferr_0432 Acidithiobacillus ferrooxidans ATCC 53993 TetR family transcriptional regulator YP_002218893.1 409756 D 380394 CDS YP_002218894.1 198282573 6876385 410397..411269 1 NC_011206.1 KEGG: aeh:Mlg_0084 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 411269 6876385 Lferr_0433 Acidithiobacillus ferrooxidans ATCC 53993 acetylglutamate kinase YP_002218894.1 410397 D 380394 CDS YP_002218895.1 198282574 6876386 complement(411352..412365) 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: fph:Fphi_1408 membrane fusion protein; secretion protein HlyD family protein 412365 6876386 Lferr_0434 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002218895.1 411352 R 380394 CDS YP_002218896.1 198282575 6876387 412602..413168 1 NC_011206.1 KEGG: noc:Noc_1000 hypothetical protein; hypothetical protein 413168 6876387 Lferr_0435 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218896.1 412602 D 380394 CDS YP_002218897.1 198282576 6876388 complement(413215..414165) 1 NC_011206.1 KEGG: noc:Noc_2101 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 414165 6876388 Lferr_0436 Acidithiobacillus ferrooxidans ATCC 53993 biotin synthase YP_002218897.1 413215 R 380394 CDS YP_002218898.1 198282577 6876389 complement(414162..414512) 1 NC_011206.1 PFAM: protein of unknown function DUF167; KEGG: pfo:Pfl_5322 hypothetical protein; hypothetical protein 414512 6876389 Lferr_0437 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218898.1 414162 R 380394 CDS YP_002218899.1 198282578 6876390 complement(414537..414815) 1 NC_011206.1 PFAM: protein of unknown function YGGT; KEGG: abo:ABO_2667 YGGT family protein, putative; hypothetical protein 414815 6876390 Lferr_0438 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218899.1 414537 R 380394 CDS YP_002218900.1 198282579 6876391 complement(414812..415639) 1 NC_011206.1 KEGG: aeh:Mlg_0340 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 415639 6876391 Lferr_0439 Acidithiobacillus ferrooxidans ATCC 53993 pyrroline-5-carboxylate reductase YP_002218900.1 414812 R 380394 CDS YP_002218901.1 198282580 6876392 complement(415636..416304) 1 NC_011206.1 PFAM: alanine racemase domain protein; KEGG: csa:Csal_3054 protein of unknown function UPF0001; alanine racemase domain-containing protein 416304 6876392 Lferr_0440 Acidithiobacillus ferrooxidans ATCC 53993 alanine racemase domain-containing protein YP_002218901.1 415636 R 380394 CDS YP_002218902.1 198282581 6876393 416406..417455 1 NC_011206.1 KEGG: azo:azo3468 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 417455 6876393 Lferr_0441 Acidithiobacillus ferrooxidans ATCC 53993 twitching motility protein YP_002218902.1 416406 D 380394 CDS YP_002218903.1 198282582 6876394 417465..418595 1 NC_011206.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: azo:azo3469 twitching motility protein; twitching motility protein 418595 6876394 Lferr_0442 Acidithiobacillus ferrooxidans ATCC 53993 twitching motility protein YP_002218903.1 417465 D 380394 CDS YP_002218904.1 198282583 6876395 418601..419749 1 NC_011206.1 TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: rru:Rru_A0064 squalene-phytoene synthase; hopene-associated glycosyltransferase HpnB 419749 6876395 Lferr_0443 Acidithiobacillus ferrooxidans ATCC 53993 hopene-associated glycosyltransferase HpnB YP_002218904.1 418601 D 380394 CDS YP_002218905.1 198282584 6876396 complement(419809..420936) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vok:COSY_0750 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 420936 6876396 Lferr_0444 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002218905.1 419809 R 380394 CDS YP_002218906.1 198282585 6876397 complement(421061..421678) 1 NC_011206.1 KEGG: rba:RB11231 hypothetical protein; hypothetical protein 421678 6876397 Lferr_0445 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218906.1 421061 R 380394 CDS YP_002218907.1 198282586 6876398 complement(421691..422380) 1 NC_011206.1 PFAM: beta-lactamase domain protein; KEGG: noc:Noc_2007 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 422380 6876398 Lferr_0446 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002218907.1 421691 R 380394 CDS YP_002218908.1 198282587 6876399 complement(422521..423222) 1 NC_011206.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: hha:Hhal_0917 putative transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 423222 6876399 Lferr_0447 Acidithiobacillus ferrooxidans ATCC 53993 Crp/Fnr family transcriptional regulator YP_002218908.1 422521 R 380394 CDS YP_002218909.1 198282588 6876400 complement(423219..423911) 1 NC_011206.1 KEGG: xfa:XF0784 tRNA (guanine-N(7))-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 423911 6876400 Lferr_0448 Acidithiobacillus ferrooxidans ATCC 53993 tRNA (guanine-N(7)-)-methyltransferase YP_002218909.1 423219 R 380394 CDS YP_002218910.1 198282589 6876401 423949..424446 1 NC_011206.1 KEGG: mfa:Mfla_2215 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 424446 6876401 Lferr_0449 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002218910.1 423949 D 380394 CDS YP_002218911.1 198282590 6876402 424443..425576 1 NC_011206.1 KEGG: tbd:Tbd_2662 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 425576 6876402 Lferr_0450 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002218911.1 424443 D 380394 CDS YP_002218912.1 198282591 6876403 complement(425610..426146) 1 NC_011206.1 KEGG: cvi:CV_3193 protein-disulfide reductase; protein-disulfide reductase 426146 6876403 Lferr_0451 Acidithiobacillus ferrooxidans ATCC 53993 protein-disulfide reductase YP_002218912.1 425610 R 380394 CDS YP_002218913.1 198282592 6876404 complement(426119..426730) 1 NC_011206.1 KEGG: bbr:BB2320 disulfide isomerase/thiol-disulfide oxidase; hypothetical protein 426730 6876404 Lferr_0452 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218913.1 426119 R 380394 CDS YP_002218914.1 198282593 6876405 complement(426727..428397) 1 NC_011206.1 PFAM: glycosyl transferase family 39; KEGG: pvi:Cvib_0513 glycosyl transferase, family 39; glycosyl transferase 428397 6876405 Lferr_0453 Acidithiobacillus ferrooxidans ATCC 53993 glycosyl transferase YP_002218914.1 426727 R 380394 CDS YP_002218915.1 198282594 6876406 complement(428390..428851) 1 NC_011206.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; ssrA-binding protein 428851 smpB 6876406 smpB Acidithiobacillus ferrooxidans ATCC 53993 ssrA-binding protein YP_002218915.1 428390 R 380394 CDS YP_002218916.1 198282595 6876407 428979..430148 1 NC_011206.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: pmy:Pmen_1132 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 430148 6876407 Lferr_0455 Acidithiobacillus ferrooxidans ATCC 53993 phospholipase D/transphosphatidylase YP_002218916.1 428979 D 380394 CDS YP_002218917.1 198282596 6876408 430158..430643 1 NC_011206.1 PFAM: cyclase/dehydrase; KEGG: hha:Hhal_1484 cyclase/dehydrase; cyclase/dehydrase 430643 6876408 Lferr_0456 Acidithiobacillus ferrooxidans ATCC 53993 cyclase/dehydrase YP_002218917.1 430158 D 380394 CDS YP_002218918.1 198282597 6876409 complement(430640..430987) 1 NC_011206.1 PFAM: SmpA/OmlA domain protein; KEGG: noc:Noc_1195 SmpA/OmlA; SmpA/OmlA domain-containing protein 430987 6876409 Lferr_0457 Acidithiobacillus ferrooxidans ATCC 53993 SmpA/OmlA domain-containing protein YP_002218918.1 430640 R 380394 CDS YP_002218919.1 198282598 6876410 431054..431530 1 NC_011206.1 PFAM: ferric-uptake regulator; KEGG: eba:ebB167 ferric uptake regulation protein (ferric uptake regulator); Fur family ferric uptake regulator 431530 6876410 Lferr_0458 Acidithiobacillus ferrooxidans ATCC 53993 Fur family ferric uptake regulator YP_002218919.1 431054 D 380394 CDS YP_002218920.1 198282599 6876411 complement(431527..432657) 1 NC_011206.1 KEGG: csa:Csal_0477 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; glutamate 5-kinase 432657 6876411 Lferr_0459 Acidithiobacillus ferrooxidans ATCC 53993 glutamate 5-kinase YP_002218920.1 431527 R 380394 CDS YP_002218921.1 198282600 6876412 complement(432654..433778) 1 NC_011206.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: maq:Maqu_0857 GTPase ObgE; GTP-binding protein Obg/CgtA 433778 6876412 Lferr_0460 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein Obg/CgtA YP_002218921.1 432654 R 380394 CDS YP_002218922.1 198282601 6876413 complement(433834..434094) 1 NC_011206.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 434094 rpmA 6876413 rpmA Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L27 YP_002218922.1 433834 R 380394 CDS YP_002218923.1 198282602 6876414 complement(434106..434417) 1 NC_011206.1 PFAM: ribosomal protein L21; KEGG: tbd:Tbd_0864 ribosomal protein L21; 50S ribosomal protein L21 434417 rplU 6876414 rplU Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L21 YP_002218923.1 434106 R 380394 CDS YP_002218924.1 198282603 6876415 complement(434600..436150) 1 NC_011206.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: scl:sce6889 putative sulfate transporter, SulP family; sulfate transporter 436150 6876415 Lferr_0463 Acidithiobacillus ferrooxidans ATCC 53993 sulfate transporter YP_002218924.1 434600 R 380394 CDS YP_002218925.1 198282604 6876416 complement(436160..436789) 1 NC_011206.1 PFAM: carbonic anhydrase; KEGG: ppd:Ppro_2975 carbonate dehydratase; carbonate dehydratase 436789 6876416 Lferr_0464 Acidithiobacillus ferrooxidans ATCC 53993 carbonate dehydratase YP_002218925.1 436160 R 380394 CDS YP_002218926.1 198282605 6876417 complement(436957..439311) 1 NC_011206.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 439311 6876417 Lferr_0465 Acidithiobacillus ferrooxidans ATCC 53993 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002218926.1 436957 R 380394 CDS YP_002218927.1 198282606 6876418 complement(439407..440192) 1 NC_011206.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pmy:Pmen_0523 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 440192 6876418 Lferr_0466 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinone/menaquinone biosynthesis methyltransferase YP_002218927.1 439407 R 380394 CDS YP_002218928.1 198282607 6876419 complement(440240..440896) 1 NC_011206.1 PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_3962 putative glutathione S-transferase; glutathione S-transferase domain 440896 6876419 Lferr_0467 Acidithiobacillus ferrooxidans ATCC 53993 glutathione S-transferase domain YP_002218928.1 440240 R 380394 CDS YP_002218929.1 198282608 6876420 complement(440916..441521) 1 NC_011206.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: aeh:Mlg_0337 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW 441521 6876420 Lferr_0468 Acidithiobacillus ferrooxidans ATCC 53993 methionine biosynthesis protein MetW YP_002218929.1 440916 R 380394 CDS YP_002218930.1 198282609 6876421 complement(441518..442669) 1 NC_011206.1 KEGG: aeh:Mlg_0338 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 442669 6876421 Lferr_0469 Acidithiobacillus ferrooxidans ATCC 53993 homoserine O-acetyltransferase YP_002218930.1 441518 R 380394 CDS YP_002218931.1 198282610 6876422 442884..443639 1 NC_011206.1 hypothetical protein 443639 6876422 Lferr_0470 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218931.1 442884 D 380394 CDS YP_002218932.1 198282611 6876423 443773..445017 1 NC_011206.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 445017 glyA 6876423 glyA Acidithiobacillus ferrooxidans ATCC 53993 serine hydroxymethyltransferase YP_002218932.1 443773 D 380394 CDS YP_002218933.1 198282612 6876424 445024..445515 1 NC_011206.1 PFAM: ATP-cone domain protein; KEGG: yps:YPTB0933 hypothetical protein; transcriptional regulator NrdR 445515 nrdR 6876424 nrdR Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator NrdR YP_002218933.1 445024 D 380394 CDS YP_002218934.1 198282613 6876425 445532..446605 1 NC_011206.1 KEGG: tbd:Tbd_2168 riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 446605 6876425 Lferr_0473 Acidithiobacillus ferrooxidans ATCC 53993 riboflavin biosynthesis protein RibD YP_002218934.1 445532 D 380394 CDS YP_002218935.1 198282614 6876426 446609..447265 1 NC_011206.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: pfo:Pfl_5018 riboflavin synthase subunit alpha; riboflavin synthase subunit alpha 447265 6876426 Lferr_0474 Acidithiobacillus ferrooxidans ATCC 53993 riboflavin synthase subunit alpha YP_002218935.1 446609 D 380394 CDS YP_002218936.1 198282615 6876427 447262..448395 1 NC_011206.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: vco:VC0395_A1859 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 448395 6876427 Lferr_0475 Acidithiobacillus ferrooxidans ATCC 53993 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002218936.1 447262 D 380394 CDS YP_002218937.1 198282616 6876428 448392..448856 1 NC_011206.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 448856 ribH 6876428 ribH Acidithiobacillus ferrooxidans ATCC 53993 6,7-dimethyl-8-ribityllumazine synthase YP_002218937.1 448392 D 380394 CDS YP_002218938.1 198282617 6876429 448867..449310 1 NC_011206.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: saz:Sama_1020 N utilization substance protein B; NusB antitermination factor 449310 6876429 Lferr_0477 Acidithiobacillus ferrooxidans ATCC 53993 NusB antitermination factor YP_002218938.1 448867 D 380394 CDS YP_002218939.1 198282618 6876430 449438..449719 1 NC_011206.1 KEGG: mfa:Mfla_1747 hypothetical protein; hypothetical protein 449719 6876430 Lferr_0478 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218939.1 449438 D 380394 CDS YP_002218940.1 198282619 6876431 449878..450450 1 NC_011206.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sfu:Sfum_3151 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 450450 6876431 Lferr_0479 Acidithiobacillus ferrooxidans ATCC 53993 Sel1 domain-containing protein repeat-containing protein YP_002218940.1 449878 D 380394 CDS YP_002218941.1 198282620 6876432 complement(450468..450821) 1 NC_011206.1 KEGG: amr:AM1_0080 hypothetical protein; hypothetical protein 450821 6876432 Lferr_0480 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218941.1 450468 R 380394 CDS YP_002218942.1 198282621 6876433 complement(450876..452558) 1 NC_011206.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: noc:Noc_2345 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 452558 6876433 Lferr_0481 Acidithiobacillus ferrooxidans ATCC 53993 2-polyprenylphenol 6-hydroxylase YP_002218942.1 450876 R 380394 CDS YP_002218943.1 198282622 6876434 complement(452658..453311) 1 NC_011206.1 PFAM: OmpA/MotB domain protein; KEGG: tbd:Tbd_0127 outer membrane protein; ompA/MotB domain-containing protein 453311 6876434 Lferr_0482 Acidithiobacillus ferrooxidans ATCC 53993 ompA/MotB domain-containing protein YP_002218943.1 452658 R 380394 CDS YP_002218944.1 198282623 6876438 453886..455076 1 NC_011206.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 455076 6876438 Lferr_0483 Acidithiobacillus ferrooxidans ATCC 53993 elongation factor Tu YP_002218944.1 453886 D 380394 CDS YP_002218945.1 198282624 6876440 455227..455577 1 NC_011206.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mca:MCA1060 preprotein translocase, SecE subunit; preprotein translocase subunit SecE 455577 6876440 Lferr_0484 Acidithiobacillus ferrooxidans ATCC 53993 preprotein translocase subunit SecE YP_002218945.1 455227 D 380394 CDS YP_002218946.1 198282625 6876441 455578..456111 1 NC_011206.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: aeh:Mlg_0446 transcription antitermination protein NusG; NusG antitermination factor 456111 6876441 Lferr_0485 Acidithiobacillus ferrooxidans ATCC 53993 NusG antitermination factor YP_002218946.1 455578 D 380394 CDS YP_002218947.1 198282626 6876442 456165..456593 1 NC_011206.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 456593 rplK 6876442 rplK Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L11 YP_002218947.1 456165 D 380394 CDS YP_002218948.1 198282627 6876443 456597..457289 1 NC_011206.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 457289 rplA 6876443 rplA Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L1 YP_002218948.1 456597 D 380394 CDS YP_002218949.1 198282628 6876444 457433..457954 1 NC_011206.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 457954 rplJ 6876444 rplJ Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L10 YP_002218949.1 457433 D 380394 CDS YP_002218950.1 198282629 6876445 457984..458370 1 NC_011206.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 458370 rplL 6876445 rplL Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L7/L12 YP_002218950.1 457984 D 380394 CDS YP_002218951.1 198282630 6876446 458494..462582 1 NC_011206.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; KEGG: aeh:Mlg_0451 DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 462582 6876446 Lferr_0490 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed RNA polymerase subunit beta YP_002218951.1 458494 D 380394 CDS YP_002218952.1 198282631 6876447 462607..466770 1 NC_011206.1 KEGG: aeh:Mlg_0452 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 466770 6876447 Lferr_0491 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed RNA polymerase subunit beta' YP_002218952.1 462607 D 380394 CDS YP_002218953.1 198282632 6876448 466880..467251 1 NC_011206.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 467251 rpsL 6876448 rpsL Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S12 YP_002218953.1 466880 D 380394 CDS YP_002218954.1 198282633 6876449 467278..467748 1 NC_011206.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 467748 6876449 Lferr_0493 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S7 YP_002218954.1 467278 D 380394 CDS YP_002218955.1 198282634 6876450 467781..469880 1 NC_011206.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 469880 6876450 Lferr_0494 Acidithiobacillus ferrooxidans ATCC 53993 elongation factor G YP_002218955.1 467781 D 380394 CDS YP_002218956.1 198282635 6876451 469901..471091 1 NC_011206.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 471091 6876451 Lferr_0495 Acidithiobacillus ferrooxidans ATCC 53993 elongation factor Tu YP_002218956.1 469901 D 380394 CDS YP_002218957.1 198282636 6876452 471091..471399 1 NC_011206.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 471399 rpsJ 6876452 rpsJ Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S10 YP_002218957.1 471091 D 380394 CDS YP_002218958.1 198282637 6876453 471417..472049 1 NC_011206.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 472049 rplC 6876453 rplC Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L3 YP_002218958.1 471417 D 380394 CDS YP_002218959.1 198282638 6876454 472060..472677 1 NC_011206.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 472677 rplD 6876454 rplD Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L4 YP_002218959.1 472060 D 380394 CDS YP_002218960.1 198282639 6876455 472674..472967 1 NC_011206.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 472967 rplW 6876455 rplW Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L23 YP_002218960.1 472674 D 380394 CDS YP_002218961.1 198282640 6876456 472984..473808 1 NC_011206.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 473808 rplB 6876456 rplB Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L2 YP_002218961.1 472984 D 380394 CDS YP_002218962.1 198282641 6876457 473827..474102 1 NC_011206.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 474102 rpsS 6876457 rpsS Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S19 YP_002218962.1 473827 D 380394 CDS YP_002218963.1 198282642 6876458 474114..474449 1 NC_011206.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 474449 rplV 6876458 rplV Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L22 YP_002218963.1 474114 D 380394 CDS YP_002218964.1 198282643 6876459 474457..475119 1 NC_011206.1 KEGG: xcb:XC_3334 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 475119 6876459 Lferr_0503 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S3 YP_002218964.1 474457 D 380394 CDS YP_002218965.1 198282644 6876460 475132..475548 1 NC_011206.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 475548 rplP 6876460 rplP Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L16 YP_002218965.1 475132 D 380394 CDS YP_002218966.1 198282645 6876461 475545..475742 1 NC_011206.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 475742 6876461 Lferr_0505 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L29 YP_002218966.1 475545 D 380394 CDS YP_002218967.1 198282646 6876462 475739..476014 1 NC_011206.1 PFAM: ribosomal protein S17; KEGG: csa:Csal_0430 ribosomal protein S17; 30S ribosomal protein S17 476014 6876462 Lferr_0506 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S17 YP_002218967.1 475739 D 380394 CDS YP_002218968.1 198282647 6876463 476011..476379 1 NC_011206.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 476379 rplN 6876463 rplN Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L14 YP_002218968.1 476011 D 380394 CDS YP_002218969.1 198282648 6876464 476389..476709 1 NC_011206.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 476709 6876464 Lferr_0508 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L24 YP_002218969.1 476389 D 380394 CDS YP_002218970.1 198282649 6876465 476724..477266 1 NC_011206.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 477266 6876465 Lferr_0509 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L5 YP_002218970.1 476724 D 380394 CDS YP_002218971.1 198282650 6876466 477280..477465 1 NC_011206.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 477465 rpsN 6876466 rpsN Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S14 YP_002218971.1 477280 D 380394 CDS YP_002218972.1 198282651 6876467 477475..477870 1 NC_011206.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 477870 rpsH 6876467 rpsH Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S8 YP_002218972.1 477475 D 380394 CDS YP_002218973.1 198282652 6876468 477884..478408 1 NC_011206.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 478408 rplF 6876468 rplF Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L6 YP_002218973.1 477884 D 380394 CDS YP_002218974.1 198282653 6876469 478427..478780 1 NC_011206.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 478780 rplR 6876469 rplR Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L18 YP_002218974.1 478427 D 380394 CDS YP_002218975.1 198282654 6876470 478793..479323 1 NC_011206.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 479323 rpsE 6876470 rpsE Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S5 YP_002218975.1 478793 D 380394 CDS YP_002218976.1 198282655 6876471 479316..479501 1 NC_011206.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 479501 rpmD 6876471 rpmD Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L30 YP_002218976.1 479316 D 380394 CDS YP_002218977.1 198282656 6876472 479498..479935 1 NC_011206.1 late assembly protein; 50S ribosomal protein L15 479935 rplO 6876472 rplO Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L15 YP_002218977.1 479498 D 380394 CDS YP_002218978.1 198282657 6876473 479935..481266 1 NC_011206.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mfa:Mfla_0299 preprotein translocase subunit SecY; preprotein translocase subunit SecY 481266 6876473 Lferr_0517 Acidithiobacillus ferrooxidans ATCC 53993 preprotein translocase subunit SecY YP_002218978.1 479935 D 380394 CDS YP_002218979.1 198282658 6876474 481263..481925 1 NC_011206.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: csc:Csac_2267 nucleoside-triphosphate--adenylate kinase; Nucleoside-triphosphate--adenylate kinase 481925 6876474 Lferr_0518 Acidithiobacillus ferrooxidans ATCC 53993 Nucleoside-triphosphate--adenylate kinase YP_002218979.1 481263 D 380394 CDS YP_002218980.1 198282659 6876475 481926..482144 1 NC_011206.1 TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1 IF1 family protein; KEGG: tbd:Tbd_0426 translation initiation factor IF-1; translation initiation factor IF-1 482144 6876475 Lferr_0519 Acidithiobacillus ferrooxidans ATCC 53993 translation initiation factor IF-1 YP_002218980.1 481926 D 380394 CDS YP_002218981.1 198282660 6876476 482153..482266 1 NC_011206.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 482266 rpmJ 6876476 rpmJ Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L36 YP_002218981.1 482153 D 380394 CDS YP_002218982.1 198282661 6876477 482330..482686 1 NC_011206.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 482686 rpsM 6876477 rpsM Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S13 YP_002218982.1 482330 D 380394 CDS YP_002218983.1 198282662 6876478 482704..483099 1 NC_011206.1 PFAM: ribosomal protein S11; KEGG: maq:Maqu_0742 30S ribosomal protein S11; 30S ribosomal protein S11 483099 6876478 Lferr_0522 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S11 YP_002218983.1 482704 D 380394 CDS YP_002218984.1 198282663 6876479 483120..483746 1 NC_011206.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: nmu:Nmul_A0791 ribosomal protein S4; 30S ribosomal protein S4 483746 6876479 Lferr_0523 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S4 YP_002218984.1 483120 D 380394 CDS YP_002218985.1 198282664 6876480 483769..484788 1 NC_011206.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 484788 6876480 Lferr_0524 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed RNA polymerase subunit alpha YP_002218985.1 483769 D 380394 CDS YP_002218986.1 198282665 6876481 484819..485193 1 NC_011206.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 485193 rplQ 6876481 rplQ Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L17 YP_002218986.1 484819 D 380394 CDS YP_002218987.1 198282666 6876482 complement(485357..485809) 1 NC_011206.1 KEGG: plu:plu4867 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 485809 6876482 Lferr_0526 Acidithiobacillus ferrooxidans ATCC 53993 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_002218987.1 485357 R 380394 CDS YP_002218988.1 198282667 6876483 complement(485802..487058) 1 NC_011206.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: pfl:PFL_6052 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 487058 6876483 Lferr_0527 Acidithiobacillus ferrooxidans ATCC 53993 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_002218988.1 485802 R 380394 CDS YP_002218989.1 198282668 6876484 487091..487765 1 NC_011206.1 PFAM: DNA repair protein RadC; KEGG: noc:Noc_0236 DNA repair protein RadC; DNA repair protein RadC 487765 6876484 Lferr_0528 Acidithiobacillus ferrooxidans ATCC 53993 DNA repair protein RadC YP_002218989.1 487091 D 380394 CDS YP_002218990.1 198282669 6876485 487762..488127 1 NC_011206.1 PFAM: diacylglycerol kinase; KEGG: sat:SYN_02353 putative diacylglycerolkinase; diacylglycerol kinase 488127 6876485 Lferr_0529 Acidithiobacillus ferrooxidans ATCC 53993 diacylglycerol kinase YP_002218990.1 487762 D 380394 CDS YP_002218991.1 198282670 6876486 488131..488877 1 NC_011206.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: rfr:Rfer_4038 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 488877 6876486 Lferr_0530 Acidithiobacillus ferrooxidans ATCC 53993 PA-phosphatase-like phosphoesterase YP_002218991.1 488131 D 380394 CDS YP_002218992.1 198282671 6876487 489047..489400 1 NC_011206.1 hypothetical protein 489400 6876487 Lferr_0531 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218992.1 489047 D 380394 CDS YP_002218993.1 198282672 6876488 489424..489780 1 NC_011206.1 KEGG: gsu:GSU1167 hypothetical protein; hypothetical protein 489780 6876488 Lferr_0532 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218993.1 489424 D 380394 CDS YP_002218994.1 198282673 6876489 489892..490269 1 NC_011206.1 KEGG: dno:DNO_0022 hypothetical protein; hypothetical protein 490269 6876489 Lferr_0533 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002218994.1 489892 D 380394 CDS YP_002218995.1 198282674 6876490 490241..490825 1 NC_011206.1 PFAM: phosphoribosyltransferase; KEGG: gsu:GSU1017 hypoxanthine-guanine phosphoribosyltransferase; phosphoribosyltransferase 490825 6876490 Lferr_0534 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosyltransferase YP_002218995.1 490241 D 380394 CDS YP_002218996.1 198282675 6876491 490825..491637 1 NC_011206.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2; KEGG: tbd:Tbd_0778 5'-methylthioadenosine phosphorylase; methylthioadenosine phosphorylase 491637 6876491 Lferr_0535 Acidithiobacillus ferrooxidans ATCC 53993 methylthioadenosine phosphorylase YP_002218996.1 490825 D 380394 CDS YP_002218997.1 198282676 6876492 complement(491660..493009) 1 NC_011206.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aeh:Mlg_2534 NADPH-glutathione reductase; glutathione-disulfide reductase 493009 6876492 Lferr_0536 Acidithiobacillus ferrooxidans ATCC 53993 glutathione-disulfide reductase YP_002218997.1 491660 R 380394 CDS YP_002218998.1 198282677 6876493 complement(493099..493842) 1 NC_011206.1 KEGG: pha:PSHAa0759 peroxiredoxin/glutaredoxin protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; glutaredoxin-family domain-containing protein 493842 6876493 Lferr_0537 Acidithiobacillus ferrooxidans ATCC 53993 glutaredoxin-family domain-containing protein YP_002218998.1 493099 R 380394 CDS YP_002218999.1 198282678 6876494 complement(493978..495096) 1 NC_011206.1 KEGG: cvi:CV_3516 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 495096 6876494 Lferr_0538 Acidithiobacillus ferrooxidans ATCC 53993 phosphoserine phosphatase SerB YP_002218999.1 493978 R 380394 CDS YP_002219000.1 198282679 6876495 complement(495093..498443) 1 NC_011206.1 KEGG: pau:PA14_25230 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 498443 6876495 Lferr_0539 Acidithiobacillus ferrooxidans ATCC 53993 transcription-repair coupling factor YP_002219000.1 495093 R 380394 CDS YP_002219001.1 198282680 6876496 498694..499407 1 NC_011206.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: noc:Noc_0854 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 499407 6876496 Lferr_0540 Acidithiobacillus ferrooxidans ATCC 53993 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002219001.1 498694 D 380394 CDS YP_002219002.1 198282681 6876497 499412..499891 1 NC_011206.1 KEGG: gme:Gmet_0059 MECDP-synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 499891 6876497 Lferr_0541 Acidithiobacillus ferrooxidans ATCC 53993 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_002219002.1 499412 D 380394 CDS YP_002219003.1 198282682 6876498 499884..500972 1 NC_011206.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: noc:Noc_0856 tRNA pseudouridine synthase D; tRNA pseudouridine synthase D TruD 500972 6876498 Lferr_0542 Acidithiobacillus ferrooxidans ATCC 53993 tRNA pseudouridine synthase D TruD YP_002219003.1 499884 D 380394 CDS YP_002219004.1 198282683 6876499 501048..501524 1 NC_011206.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rso:RSc3347 probable transcription regulator protein; merR family transcriptional regulator 501524 6876499 Lferr_0543 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002219004.1 501048 D 380394 CDS YP_002219005.1 198282684 6876500 complement(501592..502170) 1 NC_011206.1 PFAM: Smr protein/MutS2; KEGG: pol:Bpro_0947 Smr protein/MutS2; Smr protein/MutS2 502170 6876500 Lferr_0544 Acidithiobacillus ferrooxidans ATCC 53993 Smr protein/MutS2 YP_002219005.1 501592 R 380394 CDS YP_002219006.1 198282685 6876501 complement(502174..503145) 1 NC_011206.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: azo:azo1363 thioredoxin-disulfide reductase; thioredoxin reductase 503145 6876501 Lferr_0545 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin reductase YP_002219006.1 502174 R 380394 CDS YP_002219007.1 198282686 6876502 503512..505713 1 NC_011206.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: tbd:Tbd_1002 cell division transmembrane protein FtsK; cell division protein FtsK 505713 6876502 Lferr_0546 Acidithiobacillus ferrooxidans ATCC 53993 cell division protein FtsK YP_002219007.1 503512 D 380394 CDS YP_002219008.1 198282687 6876503 505685..506377 1 NC_011206.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: dar:Daro_1296 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 506377 6876503 Lferr_0547 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane lipoprotein carrier protein LolA YP_002219008.1 505685 D 380394 CDS YP_002219009.1 198282688 6876504 506396..507466 1 NC_011206.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ppd:Ppro_1410 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 507466 6876504 Lferr_0548 Acidithiobacillus ferrooxidans ATCC 53993 aromatic hydrocarbon degradation membrane protein YP_002219009.1 506396 D 380394 CDS YP_002219010.1 198282689 6876505 507494..508822 1 NC_011206.1 PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mca:MCA1782 recombination factor protein RarA; ATPase AAA 508822 6876505 Lferr_0549 Acidithiobacillus ferrooxidans ATCC 53993 ATPase AAA YP_002219010.1 507494 D 380394 CDS YP_002219011.1 198282690 6876506 508815..510080 1 NC_011206.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 510080 6876506 Lferr_0550 Acidithiobacillus ferrooxidans ATCC 53993 seryl-tRNA synthetase YP_002219011.1 508815 D 380394 CDS YP_002219012.1 198282691 6876507 510084..510317 1 NC_011206.1 KEGG: reh:H16_A1662 hypothetical protein; transcriptional antiterminator Rof 510317 6876507 Lferr_0551 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional antiterminator Rof YP_002219012.1 510084 D 380394 CDS YP_002219013.1 198282692 6876508 510314..511357 1 NC_011206.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pen:PSEEN1888 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 511357 6876508 Lferr_0552 Acidithiobacillus ferrooxidans ATCC 53993 ErfK/YbiS/YcfS/YnhG family protein YP_002219013.1 510314 D 380394 CDS YP_002219014.1 198282693 6876515 516923..517384 1 NC_011206.1 PFAM: protein of unknown function DUF150; KEGG: csa:Csal_3076 hypothetical protein; hypothetical protein 517384 6876515 Lferr_0553 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219014.1 516923 D 380394 CDS YP_002219015.1 198282694 6876516 517416..518897 1 NC_011206.1 TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; KEGG: nmu:Nmul_A1865 NusA antitermination factor; NusA antitermination factor 518897 6876516 Lferr_0554 Acidithiobacillus ferrooxidans ATCC 53993 NusA antitermination factor YP_002219015.1 517416 D 380394 CDS YP_002219016.1 198282695 6876517 518956..521583 1 NC_011206.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; Miro domain protein; KEGG: mfa:Mfla_0067 translation initiation factor IF-2; translation initiation factor IF-2 521583 6876517 Lferr_0555 Acidithiobacillus ferrooxidans ATCC 53993 translation initiation factor IF-2 YP_002219016.1 518956 D 380394 CDS YP_002219017.1 198282696 6876518 521591..521977 1 NC_011206.1 PFAM: ribosome-binding factor A; KEGG: pmy:Pmen_3607 ribosome-binding factor A; ribosome-binding factor A 521977 6876518 Lferr_0556 Acidithiobacillus ferrooxidans ATCC 53993 ribosome-binding factor A YP_002219017.1 521591 D 380394 CDS YP_002219018.1 198282697 6876519 521974..522855 1 NC_011206.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: psa:PST_3308 tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 522855 6876519 Lferr_0557 Acidithiobacillus ferrooxidans ATCC 53993 tRNA pseudouridine synthase B YP_002219018.1 521974 D 380394 CDS YP_002219019.1 198282698 6876520 522894..523163 1 NC_011206.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 523163 rpsO 6876520 rpsO Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S15 YP_002219019.1 522894 D 380394 CDS YP_002219020.1 198282699 6876521 523174..525252 1 NC_011206.1 KEGG: aeh:Mlg_1944 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polyribonucleotide nucleotidyltransferase 525252 6876521 Lferr_0559 Acidithiobacillus ferrooxidans ATCC 53993 polyribonucleotide nucleotidyltransferase YP_002219020.1 523174 D 380394 CDS YP_002219021.1 198282700 6876522 525295..526581 1 NC_011206.1 PFAM: peptidase M16 domain protein; KEGG: sus:Acid_7201 peptidase M16 domain protein; peptidase M16 domain-containing protein 526581 6876522 Lferr_0560 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M16 domain-containing protein YP_002219021.1 525295 D 380394 CDS YP_002219022.1 198282701 6876523 complement(526584..527336) 1 NC_011206.1 KEGG: neu:NE0138 metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 527336 6876523 Lferr_0561 Acidithiobacillus ferrooxidans ATCC 53993 hydroxyacylglutathione hydrolase YP_002219022.1 526584 R 380394 CDS YP_002219023.1 198282702 6876524 527445..528242 1 NC_011206.1 KEGG: eba:ebA6459 generic methyl-transferase; hypothetical protein 528242 6876524 Lferr_0562 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219023.1 527445 D 380394 CDS YP_002219024.1 198282703 6876525 528224..528700 1 NC_011206.1 PFAM: ribonuclease H; KEGG: hha:Hhal_1585 ribonuclease H; ribonuclease H 528700 6876525 Lferr_0563 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease H YP_002219024.1 528224 D 380394 CDS YP_002219025.1 198282704 6876526 528691..529437 1 NC_011206.1 KEGG: sde:Sde_2021 response regulator receiver domain protein (CheY-like); TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 529437 6876526 Lferr_0564 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit epsilon YP_002219025.1 528691 D 380394 CDS YP_002219026.1 198282705 6876527 complement(529442..529867) 1 NC_011206.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 roadblock/LC7; Roadblock/LC7 family protein 529867 6876527 Lferr_0565 Acidithiobacillus ferrooxidans ATCC 53993 Roadblock/LC7 family protein YP_002219026.1 529442 R 380394 CDS YP_002219027.1 198282706 6876528 complement(529944..530351) 1 NC_011206.1 KEGG: eba:ebB148 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 530351 6876528 Lferr_0566 Acidithiobacillus ferrooxidans ATCC 53993 lactoylglutathione lyase YP_002219027.1 529944 R 380394 CDS YP_002219028.1 198282707 6876529 complement(530362..530679) 1 NC_011206.1 KEGG: pca:Pcar_1338 hypothetical protein; hypothetical protein 530679 6876529 Lferr_0567 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219028.1 530362 R 380394 CDS YP_002219029.1 198282708 6876530 complement(530684..531883) 1 NC_011206.1 PFAM: argininosuccinate synthase; KEGG: psa:PST_1203 argininosuccinate synthase; argininosuccinate synthase 531883 6876530 Lferr_0568 Acidithiobacillus ferrooxidans ATCC 53993 argininosuccinate synthase YP_002219029.1 530684 R 380394 CDS YP_002219030.1 198282709 6876531 complement(531887..532822) 1 NC_011206.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: pst:PSPTO_4164 ornithine carbamoyltransferase; ornithine carbamoyltransferase 532822 6876531 Lferr_0569 Acidithiobacillus ferrooxidans ATCC 53993 ornithine carbamoyltransferase YP_002219030.1 531887 R 380394 CDS YP_002219031.1 198282710 6876532 complement(532819..533985) 1 NC_011206.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: aeh:Mlg_1102 acetylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase 533985 6876532 Lferr_0570 Acidithiobacillus ferrooxidans ATCC 53993 acetylornithine and succinylornithine aminotransferase YP_002219031.1 532819 R 380394 CDS YP_002219032.1 198282711 6876533 complement(533985..535211) 1 NC_011206.1 KEGG: psb:Psyr_3555 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 535211 6876533 Lferr_0571 Acidithiobacillus ferrooxidans ATCC 53993 aspartate kinase YP_002219032.1 533985 R 380394 CDS YP_002219033.1 198282712 6876534 complement(535319..535540) 1 NC_011206.1 KEGG: tcx:Tcr_0459 hypothetical protein; hypothetical protein 535540 6876534 Lferr_0572 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219033.1 535319 R 380394 CDS YP_002219034.1 198282713 6876535 complement(535684..536169) 1 NC_011206.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rfr:Rfer_1266 Sel1-like; Sel1 domain-containing protein repeat-containing protein 536169 6876535 Lferr_0573 Acidithiobacillus ferrooxidans ATCC 53993 Sel1 domain-containing protein repeat-containing protein YP_002219034.1 535684 R 380394 CDS YP_002219035.1 198282714 6876536 complement(536289..536534) 1 NC_011206.1 hypothetical protein 536534 6876536 Lferr_0574 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219035.1 536289 R 380394 CDS YP_002219036.1 198282715 6876537 complement(536570..536746) 1 NC_011206.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: eba:ebA1543 hypothetical protein; Txe/YoeB family addiction module toxin 536746 6876537 Lferr_0575 Acidithiobacillus ferrooxidans ATCC 53993 Txe/YoeB family addiction module toxin YP_002219036.1 536570 R 380394 CDS YP_002219037.1 198282716 6876538 complement(536810..537187) 1 NC_011206.1 KEGG: cak:Caul_4018 hypothetical protein; hypothetical protein 537187 6876538 Lferr_0576 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219037.1 536810 R 380394 CDS YP_002219038.1 198282717 6876539 complement(537193..537438) 1 NC_011206.1 KEGG: cak:Caul_4019 prevent-host-death family protein; prevent-host-death family protein 537438 6876539 Lferr_0577 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002219038.1 537193 R 380394 CDS YP_002219039.1 198282718 6876540 537997..538533 1 NC_011206.1 KEGG: acb:A1S_3177 fimbrial protein; fimbrial protein 538533 6876540 Lferr_0578 Acidithiobacillus ferrooxidans ATCC 53993 fimbrial protein YP_002219039.1 537997 D 380394 CDS YP_002219040.1 198282719 6876541 538997..539092 1 NC_011206.1 hypothetical protein 539092 6876541 Lferr_0579 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219040.1 538997 D 380394 CDS YP_002219041.1 198282720 6876542 539106..539321 1 NC_011206.1 hypothetical protein 539321 6876542 Lferr_0580 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219041.1 539106 D 380394 CDS YP_002219042.1 198282721 6876543 539428..540519 1 NC_011206.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: tbd:Tbd_0665 transaldolase; transaldolase 540519 6876543 Lferr_0581 Acidithiobacillus ferrooxidans ATCC 53993 transaldolase YP_002219042.1 539428 D 380394 CDS YP_002219043.1 198282722 6876544 complement(540553..541326) 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aeh:Mlg_2277 enoyl-[acyl-carrier-protein] reductase (NADH); short-chain dehydrogenase/reductase SDR 541326 6876544 Lferr_0582 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002219043.1 540553 R 380394 CDS YP_002219044.1 198282723 6876545 complement(541351..543189) 1 NC_011206.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: pau:PA14_41090 membrane-bound lytic murein transglycosylase D precursor; Lytic transglycosylase 543189 6876545 Lferr_0583 Acidithiobacillus ferrooxidans ATCC 53993 Lytic transglycosylase YP_002219044.1 541351 R 380394 CDS YP_002219045.1 198282724 6876546 543414..544814 1 NC_011206.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 544814 gltX 6876546 gltX Acidithiobacillus ferrooxidans ATCC 53993 glutamyl-tRNA synthetase YP_002219045.1 543414 D 380394 CDS YP_002219046.1 198282725 6876547 544926..546863 1 NC_011206.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 546863 6876547 Lferr_0585 Acidithiobacillus ferrooxidans ATCC 53993 aconitate hydratase YP_002219046.1 544926 D 380394 CDS YP_002219047.1 198282726 6876548 546860..548152 1 NC_011206.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: tbd:Tbd_0854 isocitrate dehydrogenase (NADP); isocitrate dehydrogenase 548152 6876548 Lferr_0586 Acidithiobacillus ferrooxidans ATCC 53993 isocitrate dehydrogenase YP_002219047.1 546860 D 380394 CDS YP_002219048.1 198282727 6876549 548162..549325 1 NC_011206.1 KEGG: mca:MCA0967 succinyl-CoA synthase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 549325 6876549 Lferr_0587 Acidithiobacillus ferrooxidans ATCC 53993 succinyl-CoA synthetase subunit beta YP_002219048.1 548162 D 380394 CDS YP_002219049.1 198282728 6876550 549327..549671 1 NC_011206.1 hypothetical protein 549671 6876550 Lferr_0588 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219049.1 549327 D 380394 CDS YP_002219050.1 198282729 6876551 549668..550540 1 NC_011206.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: lpn:lpg0535 succinyl CoA synthetase alpha chain; succinyl-CoA synthetase subunit alpha 550540 6876551 Lferr_0589 Acidithiobacillus ferrooxidans ATCC 53993 succinyl-CoA synthetase subunit alpha YP_002219050.1 549668 D 380394 CDS YP_002219051.1 198282730 6876552 550540..552189 1 NC_011206.1 KEGG: tbd:Tbd_0807 NAD+ synthase (glutamine-hydrolyzing); TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase 552189 6876552 Lferr_0590 Acidithiobacillus ferrooxidans ATCC 53993 NAD+ synthetase YP_002219051.1 550540 D 380394 CDS YP_002219052.1 198282731 6876553 552186..552524 1 NC_011206.1 PFAM: nitrogen regulatory protein P-II; KEGG: hha:Hhal_2237 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 552524 6876553 Lferr_0591 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen regulatory protein P-II YP_002219052.1 552186 D 380394 CDS YP_002219053.1 198282732 6876554 complement(552558..553343) 1 NC_011206.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: tbd:Tbd_0809 putative competence lipoprotein precursor; outer membrane assembly lipoprotein YfiO 553343 6876554 Lferr_0592 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane assembly lipoprotein YfiO YP_002219053.1 552558 R 380394 CDS YP_002219054.1 198282733 6876555 553369..554301 1 NC_011206.1 KEGG: maq:Maqu_0878 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 554301 6876555 Lferr_0593 Acidithiobacillus ferrooxidans ATCC 53993 RluA family pseudouridine synthase YP_002219054.1 553369 D 380394 CDS YP_002219055.1 198282734 6876556 554291..555043 1 NC_011206.1 PFAM: protein of unknown function DUF152; KEGG: mca:MCA0973 conserved hypothetical protein TIGR00726; hypothetical protein 555043 6876556 Lferr_0594 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219055.1 554291 D 380394 CDS YP_002219056.1 198282735 6876557 555045..555593 1 NC_011206.1 PFAM: Acireductone dioxygenase ARD; Cupin 2 conserved barrel domain protein; KEGG: mar:MAE_46350 acireductone dioxygenase; Acireductone dioxygenase ARD 555593 6876557 Lferr_0595 Acidithiobacillus ferrooxidans ATCC 53993 Acireductone dioxygenase ARD YP_002219056.1 555045 D 380394 CDS YP_002219057.1 198282736 6876558 555590..556762 1 NC_011206.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: mar:MAE_13070 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; RuBisCo-like protein 556762 6876558 Lferr_0596 Acidithiobacillus ferrooxidans ATCC 53993 RuBisCo-like protein YP_002219057.1 555590 D 380394 CDS YP_002219058.1 198282737 6876559 556747..557415 1 NC_011206.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mar:MAE_51120 haloacid dehalogenase-like hydrolase; haloacid dehalogenase domain-containing protein hydrolase 557415 6876559 Lferr_0597 Acidithiobacillus ferrooxidans ATCC 53993 haloacid dehalogenase domain-containing protein hydrolase YP_002219058.1 556747 D 380394 CDS YP_002219059.1 198282738 6876560 557405..558025 1 NC_011206.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: mar:MAE_48300 aldolase/epimerase; methylthioribulose-1-phosphate dehydratase 558025 6876560 Lferr_0598 Acidithiobacillus ferrooxidans ATCC 53993 methylthioribulose-1-phosphate dehydratase YP_002219059.1 557405 D 380394 CDS YP_002219060.1 198282739 6876561 558027..558548 1 NC_011206.1 PFAM: amino acid-binding ACT domain protein; KEGG: ppd:Ppro_3514 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 558548 6876561 Lferr_0599 Acidithiobacillus ferrooxidans ATCC 53993 amino acid-binding ACT domain-containing protein YP_002219060.1 558027 D 380394 CDS YP_002219061.1 198282740 6876562 558548..559051 1 NC_011206.1 KEGG: gme:Gmet_3553 formylmethionine deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 559051 6876562 Lferr_0600 Acidithiobacillus ferrooxidans ATCC 53993 peptide deformylase YP_002219061.1 558548 D 380394 CDS YP_002219062.1 198282741 6876563 complement(559125..560711) 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C6568 putative amino acid transporter; amino acid permease-associated protein 560711 6876563 Lferr_0601 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002219062.1 559125 R 380394 CDS YP_002219063.1 198282742 6876564 complement(560875..562014) 1 NC_011206.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sde:Sde_2113 3-phosphoshikimate 1-carboxyvinyltransferase; dTDP-glucose 4,6-dehydratase 562014 6876564 Lferr_0602 Acidithiobacillus ferrooxidans ATCC 53993 dTDP-glucose 4,6-dehydratase YP_002219063.1 560875 R 380394 CDS YP_002219064.1 198282743 6876565 complement(562034..562903) 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pat:Patl_2129 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 562903 6876565 Lferr_0603 Acidithiobacillus ferrooxidans ATCC 53993 dTDP-4-dehydrorhamnose reductase YP_002219064.1 562034 R 380394 CDS YP_002219065.1 198282744 6876566 complement(562933..563439) 1 NC_011206.1 hypothetical protein 563439 6876566 Lferr_0604 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219065.1 562933 R 380394 CDS YP_002219066.1 198282745 6876567 complement(563439..563771) 1 NC_011206.1 KEGG: cbd:COXBU7E912_2012 hypothetical protein; hypothetical protein 563771 6876567 Lferr_0605 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219066.1 563439 R 380394 CDS YP_002219067.1 198282746 6876568 complement(563836..564732) 1 NC_011206.1 KEGG: har:HEAR1329 glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 564732 6876568 Lferr_0606 Acidithiobacillus ferrooxidans ATCC 53993 UTP-glucose-1-phosphate uridylyltransferase YP_002219067.1 563836 R 380394 CDS YP_002219068.1 198282747 6876569 complement(564810..565505) 1 NC_011206.1 PFAM: protein of unknown function DUF502; KEGG: bba:Bd2546 hypothetical protein; hypothetical protein 565505 6876569 Lferr_0607 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219068.1 564810 R 380394 CDS YP_002219069.1 198282748 6876570 complement(565578..566963) 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mfa:Mfla_1055 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 566963 6876570 Lferr_0608 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002219069.1 565578 R 380394 CDS YP_002219070.1 198282749 6876571 complement(566965..567471) 1 NC_011206.1 hypothetical protein 567471 6876571 Lferr_0609 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219070.1 566965 R 380394 CDS YP_002219071.1 198282750 6876572 complement(567471..568955) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pca:Pcar_0496 two component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 568955 6876572 Lferr_0610 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002219071.1 567471 R 380394 CDS YP_002219072.1 198282751 6876573 complement(569118..570794) 1 NC_011206.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: xom:XOO_1910 recombination protein N; DNA repair protein RecN 570794 6876573 Lferr_0611 Acidithiobacillus ferrooxidans ATCC 53993 DNA repair protein RecN YP_002219072.1 569118 R 380394 CDS YP_002219073.1 198282752 6876574 complement(570794..571696) 1 NC_011206.1 PFAM: ATP-NAD/AcoX kinase; KEGG: eba:ebA4805 putative inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 571696 6876574 Lferr_0612 Acidithiobacillus ferrooxidans ATCC 53993 ATP-NAD/AcoX kinase YP_002219073.1 570794 R 380394 CDS YP_002219074.1 198282753 6876575 complement(571761..572486) 1 NC_011206.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: syf:Synpcc7942_1808 pantothenate kinase; Baf family transcriptional activator 572486 6876575 Lferr_0613 Acidithiobacillus ferrooxidans ATCC 53993 Baf family transcriptional activator YP_002219074.1 571761 R 380394 CDS YP_002219075.1 198282754 6876576 complement(572483..573424) 1 NC_011206.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: xcb:XC_4026 biotin--protein ligase; biotin--acetyl-CoA-carboxylase ligase 573424 6876576 Lferr_0614 Acidithiobacillus ferrooxidans ATCC 53993 biotin--acetyl-CoA-carboxylase ligase YP_002219075.1 572483 R 380394 CDS YP_002219076.1 198282755 6876577 complement(573405..574661) 1 NC_011206.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 574661 proA 6876577 proA Acidithiobacillus ferrooxidans ATCC 53993 gamma-glutamyl phosphate reductase YP_002219076.1 573405 R 380394 CDS YP_002219077.1 198282756 6876578 complement(574828..576012) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: nmu:Nmul_A0026 major facilitator superfamily MFS_1; major facilitator superfamily protein 576012 6876578 Lferr_0616 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219077.1 574828 R 380394 CDS YP_002219078.1 198282757 6876579 complement(576073..577065) 1 NC_011206.1 KEGG: pen:PSEEN4815 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 577065 6876579 Lferr_0617 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit delta YP_002219078.1 576073 R 380394 CDS YP_002219079.1 198282758 6876580 complement(577067..577585) 1 NC_011206.1 KEGG: eca:ECA1308 LPS-assembly lipoprotein RplB; Rare lipoprotein B-like protein 577585 6876580 Lferr_0618 Acidithiobacillus ferrooxidans ATCC 53993 Rare lipoprotein B-like protein YP_002219079.1 577067 R 380394 CDS YP_002219080.1 198282759 6876581 complement(577582..580047) 1 NC_011206.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: noc:Noc_2665 leucyl-tRNA synthetase; leucyl-tRNA synthetase 580047 6876581 Lferr_0619 Acidithiobacillus ferrooxidans ATCC 53993 leucyl-tRNA synthetase YP_002219080.1 577582 R 380394 CDS YP_002219081.1 198282760 6876582 580304..580906 1 NC_011206.1 stationary phase protein that binds TrpR repressor; TrpR-binding protein WrbA 580906 6876582 Lferr_0620 Acidithiobacillus ferrooxidans ATCC 53993 TrpR-binding protein WrbA YP_002219081.1 580304 D 380394 CDS YP_002219082.1 198282761 6876583 580923..581564 1 NC_011206.1 PFAM: YceI family protein; KEGG: mmw:Mmwyl1_3499 YceI family protein; hypothetical protein 581564 6876583 Lferr_0621 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219082.1 580923 D 380394 CDS YP_002219083.1 198282762 6876584 581605..582426 1 NC_011206.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: mar:MAE_59910 D-alanyl-D-alanine dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 582426 6876584 Lferr_0622 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M15D vanX D-ala-D-ala dipeptidase YP_002219083.1 581605 D 380394 CDS YP_002219084.1 198282763 6876585 582475..583278 1 NC_011206.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: rxy:Rxyl_1786 DNA-formamidopyrimidine glycosylase; DNA glycosylase/AP lyase 583278 6876585 Lferr_0623 Acidithiobacillus ferrooxidans ATCC 53993 DNA glycosylase/AP lyase YP_002219084.1 582475 D 380394 CDS YP_002219085.1 198282764 6876586 complement(583305..583754) 1 NC_011206.1 SMART: Rhodanese domain protein; KEGG: net:Neut_0194 rhodanese domain protein; rhodanese domain-containing protein 583754 6876586 Lferr_0624 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002219085.1 583305 R 380394 CDS YP_002219086.1 198282765 6876587 583954..585129 1 NC_011206.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: lpf:lpl2012 hypothetical protein; cation diffusion facilitator family transporter 585129 6876587 Lferr_0625 Acidithiobacillus ferrooxidans ATCC 53993 cation diffusion facilitator family transporter YP_002219086.1 583954 D 380394 CDS YP_002219087.1 198282766 6876588 585284..586699 1 NC_011206.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mca:MCA1677 glutamine synthetase, type I; glutamine synthetase 586699 6876588 Lferr_0626 Acidithiobacillus ferrooxidans ATCC 53993 glutamine synthetase YP_002219087.1 585284 D 380394 CDS YP_002219088.1 198282767 6876589 586846..587415 1 NC_011206.1 KEGG: azo:azo0737 conserved hypothetical secreted protein; hypothetical protein 587415 6876589 Lferr_0627 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219088.1 586846 D 380394 CDS YP_002219089.1 198282768 6876590 587514..588266 1 NC_011206.1 KEGG: noc:Noc_0789 acid phosphatase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 588266 6876590 Lferr_0628 Acidithiobacillus ferrooxidans ATCC 53993 stationary-phase survival protein SurE YP_002219089.1 587514 D 380394 CDS YP_002219090.1 198282769 6876591 588248..588973 1 NC_011206.1 KEGG: csa:Csal_2634 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 588973 6876591 Lferr_0629 Acidithiobacillus ferrooxidans ATCC 53993 protein-L-isoaspartate O-methyltransferase YP_002219090.1 588248 D 380394 CDS YP_002219091.1 198282770 6876592 588945..589898 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: csa:Csal_2631 sigma 28 (flagella/sporulation); RpoD family RNA polymerase sigma-70 subunit 589898 6876592 Lferr_0630 Acidithiobacillus ferrooxidans ATCC 53993 RpoD family RNA polymerase sigma-70 subunit YP_002219091.1 588945 D 380394 CDS YP_002219092.1 198282771 6876593 complement(589921..590295) 1 NC_011206.1 PFAM: protein of unknown function DUF498; KEGG: nmu:Nmul_A1553 protein of unknown function DUF598; hypothetical protein 590295 6876593 Lferr_0631 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219092.1 589921 R 380394 CDS YP_002219093.1 198282772 6876594 590390..591571 1 NC_011206.1 PFAM: aminotransferase class I and II; KEGG: aeh:Mlg_1823 aminotransferase; class I/II aminotransferase 591571 6876594 Lferr_0632 Acidithiobacillus ferrooxidans ATCC 53993 class I/II aminotransferase YP_002219093.1 590390 D 380394 CDS YP_002219094.1 198282773 6876595 591571..592893 1 NC_011206.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: tbd:Tbd_0843 homoserine dehydrogenase; homoserine dehydrogenase 592893 6876595 Lferr_0633 Acidithiobacillus ferrooxidans ATCC 53993 homoserine dehydrogenase YP_002219094.1 591571 D 380394 CDS YP_002219095.1 198282774 6876596 592945..594075 1 NC_011206.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 594075 6876596 Lferr_0634 Acidithiobacillus ferrooxidans ATCC 53993 threonine synthase YP_002219095.1 592945 D 380394 CDS YP_002219096.1 198282775 6876597 594075..595040 1 NC_011206.1 KEGG: tbd:Tbd_1763 hypothetical protein; hypothetical protein 595040 6876597 Lferr_0635 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219096.1 594075 D 380394 CDS YP_002219097.1 198282776 6876598 595041..596858 1 NC_011206.1 PFAM: phosphoesterase RecJ domain protein; KEGG: csa:Csal_3008 single-stranded-DNA-specific exonuclease RecJ; phosphoesterase RecJ domain-containing protein 596858 6876598 Lferr_0636 Acidithiobacillus ferrooxidans ATCC 53993 phosphoesterase RecJ domain-containing protein YP_002219097.1 595041 D 380394 CDS YP_002219098.1 198282777 6876599 597067..597297 1 NC_011206.1 PFAM: SpoVT/AbrB domain protein; KEGG: eba:ebA7217 conserved hypothetical protein, related to putative virulence-associated proteins and nitrogen regulatory protein NtrP; SpoVT/AbrB domain-containing protein 597297 6876599 Lferr_0637 Acidithiobacillus ferrooxidans ATCC 53993 SpoVT/AbrB domain-containing protein YP_002219098.1 597067 D 380394 CDS YP_002219099.1 198282778 6876600 597297..597707 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: eba:ebD130 conserved hypothetical protein, similar to virulence associated protein VapC; PilT protein domain-containing protein 597707 6876600 Lferr_0638 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002219099.1 597297 D 380394 CDS YP_002219100.1 198282779 6876602 598975..600465 1 NC_011206.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mca:MCA0301 lysyl-tRNA synthetase; lysyl-tRNA synthetase 600465 6876602 Lferr_0640 Acidithiobacillus ferrooxidans ATCC 53993 lysyl-tRNA synthetase YP_002219100.1 598975 D 380394 CDS YP_002219101.1 198282780 6876603 600462..601706 1 NC_011206.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_2095 lipoprotein releasing system, transmembrane protein, LolC/E family; lipoprotein releasing system transmembrane protein LolC/E family 601706 6876603 Lferr_0641 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein releasing system transmembrane protein LolC/E family YP_002219101.1 600462 D 380394 CDS YP_002219102.1 198282781 6876604 601699..602394 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cvi:CV_2963 probable ATP-binding component, ABC transporter; ABC transporter-like protein 602394 6876604 Lferr_0642 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219102.1 601699 D 380394 CDS YP_002219103.1 198282782 6876605 complement(602391..602951) 1 NC_011206.1 KEGG: tcx:Tcr_0956 hypothetical protein; hypothetical protein 602951 6876605 Lferr_0643 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219103.1 602391 R 380394 CDS YP_002219104.1 198282783 6876606 603044..605146 1 NC_011206.1 PFAM: ComEC/Rec2-related protein; KEGG: azo:azo1512 putative DNA uptake/competence protein; ComEC/Rec2-like protein 605146 6876606 Lferr_0644 Acidithiobacillus ferrooxidans ATCC 53993 ComEC/Rec2-like protein YP_002219104.1 603044 D 380394 CDS YP_002219105.1 198282784 6876607 605239..605859 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 605859 6876607 Lferr_0645 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002219105.1 605239 D 380394 CDS YP_002219106.1 198282785 6876608 605856..606260 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rme:Rmet_0536 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 606260 6876608 Lferr_0646 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002219106.1 605856 D 380394 CDS YP_002219107.1 198282786 6876609 606264..606950 1 NC_011206.1 PFAM: protein of unknown function DUF374; KEGG: mag:amb4091 hypothetical protein; hypothetical protein 606950 6876609 Lferr_0647 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219107.1 606264 D 380394 CDS YP_002219108.1 198282787 6876610 606947..608092 1 NC_011206.1 KEGG: maq:Maqu_0801 three-deoxy-D-manno-octulosonic-acid transferase domain protein; hypothetical protein 608092 6876610 Lferr_0648 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219108.1 606947 D 380394 CDS YP_002219109.1 198282788 6876611 608089..609087 1 NC_011206.1 KEGG: ppf:Pput_3814 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 609087 6876611 Lferr_0649 Acidithiobacillus ferrooxidans ATCC 53993 tetraacyldisaccharide 4'-kinase YP_002219109.1 608089 D 380394 CDS YP_002219110.1 198282789 6876612 609087..609269 1 NC_011206.1 PFAM: protein of unknown function DUF343; KEGG: sfu:Sfum_3635 protein of unknown function DUF343; hypothetical protein 609269 6876612 Lferr_0650 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219110.1 609087 D 380394 CDS YP_002219111.1 198282790 6876613 609266..610027 1 NC_011206.1 KEGG: bte:BTH_I0740 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 610027 6876613 Lferr_0651 Acidithiobacillus ferrooxidans ATCC 53993 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_002219111.1 609266 D 380394 CDS YP_002219112.1 198282791 6876614 610049..610570 1 NC_011206.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 610570 6876614 Lferr_0652 Acidithiobacillus ferrooxidans ATCC 53993 inorganic pyrophosphatase YP_002219112.1 610049 D 380394 CDS YP_002219113.1 198282792 6876615 610635..611015 1 NC_011206.1 KEGG: tbd:Tbd_2109 hypothetical protein; hypothetical protein 611015 6876615 Lferr_0653 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219113.1 610635 D 380394 CDS YP_002219114.1 198282793 6876617 612072..612299 1 NC_011206.1 hypothetical protein 612299 6876617 Lferr_0655 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219114.1 612072 D 380394 CDS YP_002219115.1 198282794 6876618 612419..613015 1 NC_011206.1 KEGG: mlo:mll0380 hypothetical protein; hypothetical protein 613015 6876618 Lferr_0656 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219115.1 612419 D 380394 CDS YP_002219116.1 198282795 6876619 612999..613613 1 NC_011206.1 related to aryl-alcohol dehydrogenase; KEGG: amr:AM1_2531 aldo/keto reductase, putative; oxidoreductase-like protein 613613 6876619 Lferr_0657 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase-like protein YP_002219116.1 612999 D 380394 CDS YP_002219117.1 198282796 6876620 613610..614095 1 NC_011206.1 KEGG: amr:AM1_2531 aldo/keto reductase, putative; aldo/keto reductase 614095 6876620 Lferr_0658 Acidithiobacillus ferrooxidans ATCC 53993 aldo/keto reductase YP_002219117.1 613610 D 380394 CDS YP_002219118.1 198282797 6876621 614224..614661 1 NC_011206.1 PFAM: protein of unknown function DUF1486; KEGG: mrd:Mrad2831_5286 protein of unknown function DUF1486; hypothetical protein 614661 6876621 Lferr_0659 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219118.1 614224 D 380394 CDS YP_002219119.1 198282798 6876622 614748..615881 1 NC_011206.1 KEGG: amr:AM1_0143 hypothetical protein; hypothetical protein 615881 6876622 Lferr_0660 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219119.1 614748 D 380394 CDS YP_002219120.1 198282799 6876623 615968..616381 1 NC_011206.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cvi:CV_1054 hypothetical protein; glutathione-dependent formaldehyde-activating protein 616381 6876623 Lferr_0661 Acidithiobacillus ferrooxidans ATCC 53993 glutathione-dependent formaldehyde-activating protein YP_002219120.1 615968 D 380394 CDS YP_002219121.1 198282800 6876624 616458..616811 1 NC_011206.1 KEGG: bte:BTH_II0226 hypothetical protein; hypothetical protein 616811 6876624 Lferr_0662 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219121.1 616458 D 380394 CDS YP_002219122.1 198282801 6876625 616887..617312 1 NC_011206.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: neu:NE0446 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 617312 6876625 Lferr_0663 Acidithiobacillus ferrooxidans ATCC 53993 3-demethylubiquinone-9 3-methyltransferase YP_002219122.1 616887 D 380394 CDS YP_002219123.1 198282802 6876626 617824..617964 1 NC_011206.1 KEGG: gur:Gura_4195 hypothetical protein; hypothetical protein 617964 6876626 Lferr_0664 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219123.1 617824 D 380394 CDS YP_002219124.1 198282803 6876627 618053..618601 1 NC_011206.1 KEGG: bxe:Bxe_C0711 hypothetical protein; hypothetical protein 618601 6876627 Lferr_0665 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219124.1 618053 D 380394 CDS YP_002219125.1 198282804 6876628 618735..619595 1 NC_011206.1 KEGG: rme:Rmet_6335 integrase, catalytic region; integrase catalytic subunit 619595 6876628 Lferr_0666 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002219125.1 618735 D 380394 CDS YP_002219126.1 198282805 6876629 complement(619670..620668) 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0713 phage integrase; integrase family protein 620668 6876629 Lferr_0667 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002219126.1 619670 R 380394 CDS YP_002219127.1 198282806 6876630 complement(620661..621602) 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0712 phage integrase; integrase family protein 621602 6876630 Lferr_0668 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002219127.1 620661 R 380394 CDS YP_002219128.1 198282807 6876631 complement(621599..622843) 1 NC_011206.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pol:Bpro_0711 phage integrase; integrase family protein 622843 6876631 Lferr_0669 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002219128.1 621599 R 380394 CDS YP_002219129.1 198282808 6876632 623066..623593 1 NC_011206.1 KEGG: bxe:Bxe_C0710 putative integrase; integrase 623593 6876632 Lferr_0670 Acidithiobacillus ferrooxidans ATCC 53993 integrase YP_002219129.1 623066 D 380394 CDS YP_002219130.1 198282809 6876633 623597..624436 1 NC_011206.1 SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; ATPase AAA 624436 6876633 Lferr_0671 Acidithiobacillus ferrooxidans ATCC 53993 ATPase AAA YP_002219130.1 623597 D 380394 CDS YP_002219131.1 198282810 6876634 624447..624650 1 NC_011206.1 hypothetical protein 624650 6876634 Lferr_0672 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219131.1 624447 D 380394 CDS YP_002219132.1 198282811 6876635 624791..624955 1 NC_011206.1 KEGG: gur:Gura_4195 hypothetical protein; hypothetical protein 624955 6876635 Lferr_0673 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219132.1 624791 D 380394 CDS YP_002219133.1 198282812 6876636 624955..625242 1 NC_011206.1 KEGG: gur:Gura_4194 hypothetical protein; hypothetical protein 625242 6876636 Lferr_0674 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219133.1 624955 D 380394 CDS YP_002219134.1 198282813 6876638 627147..627755 1 NC_011206.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: dar:Daro_1297 hypothetical protein; uracil-DNA glycosylase 627755 6876638 Lferr_0676 Acidithiobacillus ferrooxidans ATCC 53993 uracil-DNA glycosylase YP_002219134.1 627147 D 380394 CDS YP_002219135.1 198282814 6876639 complement(627822..629297) 1 NC_011206.1 PFAM: protein of unknown function UPF0061; KEGG: rsp:RSP_2375 hypothetical protein; hypothetical protein 629297 6876639 Lferr_0677 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219135.1 627822 R 380394 CDS YP_002219136.1 198282815 6876640 complement(629301..631559) 1 NC_011206.1 KEGG: mca:MCA1789 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 631559 6876640 Lferr_0678 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent Clp protease ATP-binding protein ClpA YP_002219136.1 629301 R 380394 CDS YP_002219137.1 198282816 6876641 complement(631563..631871) 1 NC_011206.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rle:RL2212 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 631871 6876641 Lferr_0679 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent Clp protease adaptor protein ClpS YP_002219137.1 631563 R 380394 CDS YP_002219138.1 198282817 6876642 complement(632048..632824) 1 NC_011206.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bpt:Bpet1707 putative peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 632824 6876642 Lferr_0680 Acidithiobacillus ferrooxidans ATCC 53993 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002219138.1 632048 R 380394 CDS YP_002219139.1 198282818 6876643 complement(632840..633451) 1 NC_011206.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: hha:Hhal_1208 DJ-1 family protein; DJ-1 family protein 633451 6876643 Lferr_0681 Acidithiobacillus ferrooxidans ATCC 53993 DJ-1 family protein YP_002219139.1 632840 R 380394 CDS YP_002219140.1 198282819 6876644 complement(633589..635037) 1 NC_011206.1 KEGG: noc:Noc_0030 peptidase S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 635037 6876644 Lferr_0682 Acidithiobacillus ferrooxidans ATCC 53993 carboxyl-terminal protease YP_002219140.1 633589 R 380394 CDS YP_002219141.1 198282820 6876645 complement(635101..636519) 1 NC_011206.1 PFAM: Peptidase M23; KEGG: eba:ebA1051 peptidase family M23 protein; peptidase M23 636519 6876645 Lferr_0683 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M23 YP_002219141.1 635101 R 380394 CDS YP_002219142.1 198282821 6876646 complement(636523..638052) 1 NC_011206.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 638052 6876646 Lferr_0684 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglyceromutase YP_002219142.1 636523 R 380394 CDS YP_002219143.1 198282822 6876647 complement(638120..640606) 1 NC_011206.1 KEGG: mca:MCA2540 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 640606 6876647 Lferr_0685 Acidithiobacillus ferrooxidans ATCC 53993 glycogen/starch/alpha-glucan phosphorylase YP_002219143.1 638120 R 380394 CDS YP_002219144.1 198282823 6876648 640751..641200 1 NC_011206.1 KEGG: azo:azo1684 hypothetical protein; hypothetical protein 641200 6876648 Lferr_0686 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219144.1 640751 D 380394 CDS YP_002219145.1 198282824 6876649 641234..641620 1 NC_011206.1 PFAM: Rhodanese domain protein; KEGG: tbd:Tbd_1981 rhodanese-like protein; rhodanese domain-containing protein 641620 6876649 Lferr_0687 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002219145.1 641234 D 380394 CDS YP_002219146.1 198282825 6876650 complement(641633..642574) 1 NC_011206.1 PFAM: PfkB domain protein; KEGG: mca:MCA0047 carbohydrate kinase, PfkB family; PfkB domain-containing protein 642574 6876650 Lferr_0688 Acidithiobacillus ferrooxidans ATCC 53993 PfkB domain-containing protein YP_002219146.1 641633 R 380394 CDS YP_002219147.1 198282826 6876651 642695..643300 1 NC_011206.1 KEGG: gur:Gura_4333 OmpA/MotB domain protein; ompA/MotB domain-containing protein 643300 6876651 Lferr_0689 Acidithiobacillus ferrooxidans ATCC 53993 ompA/MotB domain-containing protein YP_002219147.1 642695 D 380394 CDS YP_002219148.1 198282827 6876652 643444..644613 1 NC_011206.1 PFAM: S-adenosylmethionine synthetase; KEGG: mms:mma_3198 S-adenosylmethionine synthetase; methionine adenosyltransferase 644613 6876652 Lferr_0690 Acidithiobacillus ferrooxidans ATCC 53993 methionine adenosyltransferase YP_002219148.1 643444 D 380394 CDS YP_002219149.1 198282828 6876653 644801..646207 1 NC_011206.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 646207 6876653 Lferr_0691 Acidithiobacillus ferrooxidans ATCC 53993 S-adenosyl-L-homocysteine hydrolase YP_002219149.1 644801 D 380394 CDS YP_002219150.1 198282829 6876654 646207..647025 1 NC_011206.1 KEGG: mca:MCA0137 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 647025 6876654 Lferr_0692 Acidithiobacillus ferrooxidans ATCC 53993 5,10-methylenetetrahydrofolate reductase YP_002219150.1 646207 D 380394 CDS YP_002219151.1 198282830 6876655 647130..648002 1 NC_011206.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: noc:Noc_2826 phosphoribulokinase; phosphoribulokinase 648002 6876655 Lferr_0693 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribulokinase YP_002219151.1 647130 D 380394 CDS YP_002219152.1 198282831 6876656 648145..648816 1 NC_011206.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: pna:Pnap_1372 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 648816 6876656 Lferr_0694 Acidithiobacillus ferrooxidans ATCC 53993 PA-phosphatase-like phosphoesterase YP_002219152.1 648145 D 380394 CDS YP_002219153.1 198282832 6876657 complement(648842..650368) 1 NC_011206.1 PFAM: protein of unknown function DUF814; KEGG: mxa:MXAN_6301 putative fibronectin-binding protein; hypothetical protein 650368 6876657 Lferr_0695 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219153.1 648842 R 380394 CDS YP_002219154.1 198282833 6876658 complement(650404..652077) 1 NC_011206.1 PFAM: ATP-sulfurylase; adenylylsulfate kinase; KEGG: cbs:COXBURSA331_A0818 sulfate adenylyltransferase/adenylylsulfate kinase; sulfate adenylyltransferase 652077 6876658 Lferr_0696 Acidithiobacillus ferrooxidans ATCC 53993 sulfate adenylyltransferase YP_002219154.1 650404 R 380394 CDS YP_002219155.1 198282834 6876659 complement(652088..652657) 1 NC_011206.1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase 652657 6876659 Lferr_0697 Acidithiobacillus ferrooxidans ATCC 53993 adenine phosphoribosyltransferase YP_002219155.1 652088 R 380394 CDS YP_002219156.1 198282835 6876660 complement(652918..654573) 1 NC_011206.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 654573 groEL 6876660 groEL Acidithiobacillus ferrooxidans ATCC 53993 chaperonin GroEL YP_002219156.1 652918 R 380394 CDS YP_002219157.1 198282836 6876661 complement(654620..654910) 1 NC_011206.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 654910 groES 6876661 groES Acidithiobacillus ferrooxidans ATCC 53993 co-chaperonin GroES YP_002219157.1 654620 R 380394 CDS YP_002219158.1 198282837 6876662 complement(655038..655868) 1 NC_011206.1 KEGG: ccr:CC_1053 hypothetical protein; hypothetical protein 655868 6876662 Lferr_0700 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219158.1 655038 R 380394 CDS YP_002219159.1 198282838 6876663 656182..658032 1 NC_011206.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mca:MCA1041 thiol:disulfide interchange protein, DsbD family; cytochrome c biogenesis protein transmembrane region 658032 6876663 Lferr_0701 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c biogenesis protein transmembrane region YP_002219159.1 656182 D 380394 CDS YP_002219160.1 198282839 6876664 complement(658052..658264) 1 NC_011206.1 KEGG: nmu:Nmul_A1061 hypothetical protein; hypothetical protein 658264 6876664 Lferr_0702 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219160.1 658052 R 380394 CDS YP_002219161.1 198282840 6876665 complement(658269..659192) 1 NC_011206.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: noc:Noc_0136 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase 659192 6876665 Lferr_0703 Acidithiobacillus ferrooxidans ATCC 53993 branched-chain amino acid aminotransferase YP_002219161.1 658269 R 380394 CDS YP_002219162.1 198282841 6876666 complement(659205..662069) 1 NC_011206.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: abo:ABO_2302 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 662069 6876666 Lferr_0704 Acidithiobacillus ferrooxidans ATCC 53993 (glutamate--ammonia-ligase) adenylyltransferase YP_002219162.1 659205 R 380394 CDS YP_002219163.1 198282842 6876667 662318..665992 1 NC_011206.1 KEGG: noc:Noc_2656 conserved hypothetical protein 2099; hypothetical protein 665992 6876667 Lferr_0705 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219163.1 662318 D 380394 CDS YP_002219164.1 198282843 6876668 665997..666812 1 NC_011206.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mca:MCA0381 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 666812 6876668 Lferr_0706 Acidithiobacillus ferrooxidans ATCC 53993 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002219164.1 665997 D 380394 CDS YP_002219165.1 198282844 6876669 667010..668773 1 NC_011206.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: bra:BRADO6119 putative ABC transporter (fused ATP-binding and permease components); ABC transporter domain-containing protein 668773 6876669 Lferr_0707 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter domain-containing protein YP_002219165.1 667010 D 380394 CDS YP_002219166.1 198282845 6876670 668795..669370 1 NC_011206.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: noc:Noc_0989 hypothetical protein; alkyl hydroperoxide reductase 669370 6876670 Lferr_0708 Acidithiobacillus ferrooxidans ATCC 53993 alkyl hydroperoxide reductase YP_002219166.1 668795 D 380394 CDS YP_002219167.1 198282846 6876671 complement(669394..669612) 1 NC_011206.1 hypothetical protein 669612 6876671 Lferr_0709 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219167.1 669394 R 380394 CDS YP_002219168.1 198282847 6876672 complement(669862..670320) 1 NC_011206.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 670320 lspA 6876672 lspA Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein signal peptidase YP_002219168.1 669862 R 380394 CDS YP_002219169.1 198282848 6876673 complement(670320..673133) 1 NC_011206.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: aeh:Mlg_0852 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 673133 6876673 Lferr_0711 Acidithiobacillus ferrooxidans ATCC 53993 isoleucyl-tRNA synthetase YP_002219169.1 670320 R 380394 CDS YP_002219170.1 198282849 6876674 complement(673136..674068) 1 NC_011206.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: esa:ESA_03313 hypothetical protein; riboflavin biosynthesis protein RibF 674068 6876674 Lferr_0712 Acidithiobacillus ferrooxidans ATCC 53993 riboflavin biosynthesis protein RibF YP_002219170.1 673136 R 380394 CDS YP_002219171.1 198282850 6876675 complement(674167..674619) 1 NC_011206.1 KEGG: bba:Bd3838 hypothetical protein; hypothetical protein 674619 6876675 Lferr_0713 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219171.1 674167 R 380394 CDS YP_002219172.1 198282851 6876676 complement(674612..676165) 1 NC_011206.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: csa:Csal_0479 integral membrane protein MviN; integral membrane protein MviN 676165 6876676 Lferr_0714 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane protein MviN YP_002219172.1 674612 R 380394 CDS YP_002219173.1 198282852 6876677 complement(676491..676859) 1 NC_011206.1 KEGG: asa:ASA_P4G177 hypothetical protein; hypothetical protein 676859 6876677 Lferr_0715 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219173.1 676491 R 380394 CDS YP_002219174.1 198282853 6876678 677109..677972 1 NC_011206.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: kpn:KPN_03990 putative alpha helix protein; hypothetical protein 677972 6876678 Lferr_0716 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219174.1 677109 D 380394 CDS YP_002219175.1 198282854 6876679 677979..678617 1 NC_011206.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 678617 gmk 6876679 gmk Acidithiobacillus ferrooxidans ATCC 53993 guanylate kinase YP_002219175.1 677979 D 380394 CDS YP_002219176.1 198282855 6876680 678641..678916 1 NC_011206.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: aeh:Mlg_2443 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 678916 6876680 Lferr_0718 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed RNA polymerase subunit omega YP_002219176.1 678641 D 380394 CDS YP_002219177.1 198282856 6876681 678900..681179 1 NC_011206.1 KEGG: mfa:Mfla_0050 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 681179 6876681 Lferr_0719 Acidithiobacillus ferrooxidans ATCC 53993 (p)ppGpp synthetase I SpoT/RelA YP_002219177.1 678900 D 380394 CDS YP_002219178.1 198282857 6876682 681195..681584 1 NC_011206.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: lpn:lpg2008 endoribonuclease L-PSP; endoribonuclease L-PSP 681584 6876682 Lferr_0720 Acidithiobacillus ferrooxidans ATCC 53993 endoribonuclease L-PSP YP_002219178.1 681195 D 380394 CDS YP_002219179.1 198282858 6876683 681586..681801 1 NC_011206.1 hypothetical protein 681801 6876683 Lferr_0721 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219179.1 681586 D 380394 CDS YP_002219180.1 198282859 6876684 681803..683857 1 NC_011206.1 KEGG: csa:Csal_3245 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecG 683857 6876684 Lferr_0722 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent DNA helicase RecG YP_002219180.1 681803 D 380394 CDS YP_002219181.1 198282860 6876685 683950..684795 1 NC_011206.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: net:Neut_0550 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 684795 6876685 Lferr_0723 Acidithiobacillus ferrooxidans ATCC 53993 ErfK/YbiS/YcfS/YnhG family protein YP_002219181.1 683950 D 380394 CDS YP_002219182.1 198282861 6876686 complement(684807..686147) 1 NC_011206.1 KEGG: csa:Csal_0796 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; protoporphyrinogen oxidase 686147 6876686 Lferr_0724 Acidithiobacillus ferrooxidans ATCC 53993 protoporphyrinogen oxidase YP_002219182.1 684807 R 380394 CDS YP_002219183.1 198282862 6876687 complement(686152..687195) 1 NC_011206.1 PFAM: protein of unknown function UPF0118; KEGG: pmy:Pmen_2994 protein of unknown function UPF0118; hypothetical protein 687195 6876687 Lferr_0725 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219183.1 686152 R 380394 CDS YP_002219184.1 198282863 6876688 687450..688298 1 NC_011206.1 PFAM: protein of unknown function DUF52; KEGG: rfr:Rfer_0398 protein of unknown function DUF52; hypothetical protein 688298 6876688 Lferr_0726 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219184.1 687450 D 380394 CDS YP_002219185.1 198282864 6876689 688279..688887 1 NC_011206.1 PFAM: AMMECR1 domain protein; KEGG: tbd:Tbd_1586 hypothetical protein; AMMECR1 domain-containing protein 688887 6876689 Lferr_0727 Acidithiobacillus ferrooxidans ATCC 53993 AMMECR1 domain-containing protein YP_002219185.1 688279 D 380394 CDS YP_002219186.1 198282865 6876690 688880..689965 1 NC_011206.1 PFAM: Radical SAM domain protein; KEGG: rfr:Rfer_0396 radical SAM; radical SAM protein 689965 6876690 Lferr_0728 Acidithiobacillus ferrooxidans ATCC 53993 radical SAM protein YP_002219186.1 688880 D 380394 CDS YP_002219187.1 198282866 6876691 complement(689973..691307) 1 NC_011206.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: maq:Maqu_0802 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 691307 6876691 Lferr_0729 Acidithiobacillus ferrooxidans ATCC 53993 TolC family type I secretion outer membrane protein YP_002219187.1 689973 R 380394 CDS YP_002219188.1 198282867 6876692 691419..692861 1 NC_011206.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: noc:Noc_0255 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 692861 6876692 Lferr_0730 Acidithiobacillus ferrooxidans ATCC 53993 para-aminobenzoate synthase subunit I YP_002219188.1 691419 D 380394 CDS YP_002219189.1 198282868 6876693 692929..693915 1 NC_011206.1 PFAM: conserved hypothetical protein; KEGG: sat:SYN_00361 hypothetical membrane protein; hypothetical protein 693915 6876693 Lferr_0731 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219189.1 692929 D 380394 CDS YP_002219190.1 198282869 6876695 694593..694775 1 NC_011206.1 hypothetical protein 694775 6876695 Lferr_0732 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219190.1 694593 D 380394 CDS YP_002219191.1 198282870 6876696 complement(694826..695023) 1 NC_011206.1 KEGG: noc:Noc_1857 hypothetical protein; hypothetical protein 695023 6876696 Lferr_0733 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219191.1 694826 R 380394 CDS YP_002219192.1 198282871 6876697 complement(695017..695247) 1 NC_011206.1 KEGG: tth:TTC1364 hypothetical protein; hypothetical protein 695247 6876697 Lferr_0734 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219192.1 695017 R 380394 CDS YP_002219193.1 198282872 6876700 complement(696486..696755) 1 NC_011206.1 KEGG: bcm:Bcenmc03_4112 sodium/calcium exchanger membrane region; hypothetical protein 696755 6876700 Lferr_0736 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219193.1 696486 R 380394 CDS YP_002219194.1 198282873 6876701 complement(696856..697170) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 697170 6876701 Lferr_0737 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002219194.1 696856 R 380394 CDS YP_002219195.1 198282874 6876702 complement(697292..698611) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 698611 6876702 Lferr_0738 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219195.1 697292 R 380394 CDS YP_002219196.1 198282875 6876703 complement(698685..699635) 1 NC_011206.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bcm:Bcenmc03_4112 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane protein 699635 6876703 Lferr_0739 Acidithiobacillus ferrooxidans ATCC 53993 sodium/calcium exchanger membrane protein YP_002219196.1 698685 R 380394 CDS YP_002219197.1 198282876 6876704 699661..700284 1 NC_011206.1 KEGG: afw:Anae109_4330 beta-lactamase domain protein; hypothetical protein 700284 6876704 Lferr_0740 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219197.1 699661 D 380394 CDS YP_002219198.1 198282877 6876705 700386..702239 1 NC_011206.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pca:Pcar_0328 cold-shock inducible ATP-independent RNA helicase; DEAD/DEAH box helicase 702239 6876705 Lferr_0741 Acidithiobacillus ferrooxidans ATCC 53993 DEAD/DEAH box helicase YP_002219198.1 700386 D 380394 CDS YP_002219199.1 198282878 6876706 complement(702337..702540) 1 NC_011206.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: azo:azo2603 cold shock-like protein; cold-shock DNA-binding domain-containing protein 702540 6876706 Lferr_0742 Acidithiobacillus ferrooxidans ATCC 53993 cold-shock DNA-binding domain-containing protein YP_002219199.1 702337 R 380394 CDS YP_002219200.1 198282879 6876707 complement(702644..704806) 1 NC_011206.1 KEGG: pap:PSPA7_5787 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 704806 6876707 Lferr_0743 Acidithiobacillus ferrooxidans ATCC 53993 primosomal protein N' YP_002219200.1 702644 R 380394 CDS YP_002219201.1 198282880 6876708 complement(705074..705976) 1 NC_011206.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: reh:H16_A3107 4-hydroxybenzoate octaprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 705976 6876708 Lferr_0744 Acidithiobacillus ferrooxidans ATCC 53993 4-hydroxybenzoate polyprenyltransferase YP_002219201.1 705074 R 380394 CDS YP_002219202.1 198282881 6876709 complement(705976..706560) 1 NC_011206.1 PFAM: Chorismate lyase; KEGG: azo:azo0478 putative chorismate:pyruvate lyase; chorismate lyase 706560 6876709 Lferr_0745 Acidithiobacillus ferrooxidans ATCC 53993 chorismate lyase YP_002219202.1 705976 R 380394 CDS YP_002219203.1 198282882 6876710 complement(706579..707181) 1 NC_011206.1 KEGG: bam:Bamb_5159 methyltransferase type 11; type 11 methyltransferase 707181 6876710 Lferr_0746 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002219203.1 706579 R 380394 CDS YP_002219204.1 198282883 6876711 707341..707724 1 NC_011206.1 hypothetical protein 707724 6876711 Lferr_0747 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219204.1 707341 D 380394 CDS YP_002219205.1 198282884 6876712 707808..709163 1 NC_011206.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 709163 6876712 Lferr_0748 Acidithiobacillus ferrooxidans ATCC 53993 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002219205.1 707808 D 380394 CDS YP_002219206.1 198282885 6876713 709168..710151 1 NC_011206.1 PFAM: PhoH family protein; KEGG: csa:Csal_2335 PhoH-like protein; PhoH family protein 710151 6876713 Lferr_0749 Acidithiobacillus ferrooxidans ATCC 53993 PhoH family protein YP_002219206.1 709168 D 380394 CDS YP_002219207.1 198282886 6876714 710148..710645 1 NC_011206.1 PFAM: protein of unknown function UPF0054; KEGG: ppf:Pput_4664 hypothetical protein; hypothetical protein 710645 6876714 Lferr_0750 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219207.1 710148 D 380394 CDS YP_002219208.1 198282887 6876715 710638..711513 1 NC_011206.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: aeh:Mlg_0397 CBS domain containing protein; hypothetical protein 711513 6876715 Lferr_0751 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219208.1 710638 D 380394 CDS YP_002219209.1 198282888 6876716 711510..713030 1 NC_011206.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rme:Rmet_0449 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 713030 6876716 Lferr_0752 Acidithiobacillus ferrooxidans ATCC 53993 apolipoprotein N-acyltransferase YP_002219209.1 711510 D 380394 CDS YP_002219210.1 198282889 6876717 complement(712999..714345) 1 NC_011206.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: nmu:Nmul_A2415 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 714345 6876717 Lferr_0753 Acidithiobacillus ferrooxidans ATCC 53993 peptidase U62 modulator of DNA gyrase YP_002219210.1 712999 R 380394 CDS YP_002219211.1 198282890 6876718 714591..715523 1 NC_011206.1 PFAM: periplasmic solute binding protein; KEGG: acr:Acry_2369 periplasmic solute binding protein; periplasmic solute-binding protein 715523 6876718 Lferr_0754 Acidithiobacillus ferrooxidans ATCC 53993 periplasmic solute-binding protein YP_002219211.1 714591 D 380394 CDS YP_002219212.1 198282891 6876719 715537..716361 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2368 ABC transporter related; ABC transporter-like protein 716361 6876719 Lferr_0755 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219212.1 715537 D 380394 CDS YP_002219213.1 198282892 6876720 716366..717271 1 NC_011206.1 PFAM: ABC-3 protein; KEGG: acr:Acry_2367 ABC-3 protein; ABC-3 protein 717271 6876720 Lferr_0756 Acidithiobacillus ferrooxidans ATCC 53993 ABC-3 protein YP_002219213.1 716366 D 380394 CDS YP_002219214.1 198282893 6876721 717275..718084 1 NC_011206.1 PFAM: ABC-3 protein; KEGG: acr:Acry_2366 ABC-3 protein; ABC-3 protein 718084 6876721 Lferr_0757 Acidithiobacillus ferrooxidans ATCC 53993 ABC-3 protein YP_002219214.1 717275 D 380394 CDS YP_002219215.1 198282894 6876722 complement(718121..719329) 1 NC_011206.1 KEGG: acr:Acry_0201 hypothetical protein; hypothetical protein 719329 6876722 Lferr_0758 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219215.1 718121 R 380394 CDS YP_002219216.1 198282895 6876723 complement(719322..720152) 1 NC_011206.1 KEGG: acr:Acry_0202 hypothetical protein; hypothetical protein 720152 6876723 Lferr_0759 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219216.1 719322 R 380394 CDS YP_002219217.1 198282896 6876724 complement(720433..721446) 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 721446 6876724 Lferr_0760 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002219217.1 720433 R 380394 CDS YP_002219218.1 198282897 6876725 complement(721443..721688) 1 NC_011206.1 hypothetical protein 721688 6876725 Lferr_0761 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219218.1 721443 R 380394 CDS YP_002219219.1 198282898 6876726 complement(721760..723007) 1 NC_011206.1 KEGG: acr:Acry_0201 hypothetical protein; hypothetical protein 723007 6876726 Lferr_0762 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219219.1 721760 R 380394 CDS YP_002219220.1 198282899 6876727 complement(723000..723842) 1 NC_011206.1 KEGG: acr:Acry_0202 hypothetical protein; hypothetical protein 723842 6876727 Lferr_0763 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219220.1 723000 R 380394 CDS YP_002219221.1 198282900 6876728 724211..724549 1 NC_011206.1 hypothetical protein 724549 6876728 Lferr_0764 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219221.1 724211 D 380394 CDS YP_002219222.1 198282901 6876729 724549..725967 1 NC_011206.1 KEGG: acr:Acry_0204 response regulator receiver protein; glycosyl transferase-like protein 725967 6876729 Lferr_0765 Acidithiobacillus ferrooxidans ATCC 53993 glycosyl transferase-like protein YP_002219222.1 724549 D 380394 CDS YP_002219223.1 198282902 6876730 725964..727226 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: acr:Acry_0205 glycosyl transferase, group 1; group 1 glycosyl transferase 727226 6876730 Lferr_0766 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002219223.1 725964 D 380394 CDS YP_002219224.1 198282903 6876731 727223..728467 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: acr:Acry_0206 glycosyl transferase, group 1; group 1 glycosyl transferase 728467 6876731 Lferr_0767 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002219224.1 727223 D 380394 CDS YP_002219225.1 198282904 6876732 728464..730296 1 NC_011206.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_0207 ABC transporter related; ABC transporter-like protein 730296 6876732 Lferr_0768 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219225.1 728464 D 380394 CDS YP_002219226.1 198282905 6876733 730293..731597 1 NC_011206.1 KEGG: cau:Caur_2850 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 731597 6876733 Lferr_0769 Acidithiobacillus ferrooxidans ATCC 53993 nucleotide sugar dehydrogenase YP_002219226.1 730293 D 380394 CDS YP_002219227.1 198282906 6876734 731638..732480 1 NC_011206.1 KEGG: acr:Acry_0208 hypothetical protein; hypothetical protein 732480 6876734 Lferr_0770 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219227.1 731638 D 380394 CDS YP_002219228.1 198282907 6876735 732492..733160 1 NC_011206.1 PFAM: Phosphoglycerate mutase; KEGG: acr:Acry_0209 phosphoglycerate mutase; phosphoglycerate mutase 733160 6876735 Lferr_0771 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglycerate mutase YP_002219228.1 732492 D 380394 CDS YP_002219229.1 198282908 6876736 complement(733137..733922) 1 NC_011206.1 KEGG: acr:Acry_0203 hypothetical protein; hypothetical protein 733922 6876736 Lferr_0772 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219229.1 733137 R 380394 CDS YP_002219230.1 198282909 6876737 complement(734088..734900) 1 NC_011206.1 SMART: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_2512 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 734900 6876737 Lferr_0773 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002219230.1 734088 R 380394 CDS YP_002219231.1 198282910 6876738 735032..735796 1 NC_011206.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bte:BTH_I0870 methlytransferase, UbiE/COQ5 family; type 11 methyltransferase 735796 6876738 Lferr_0774 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002219231.1 735032 D 380394 CDS YP_002219232.1 198282911 6876739 735846..737258 1 NC_011206.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 737258 6876739 Lferr_0775 Acidithiobacillus ferrooxidans ATCC 53993 isopropylmalate isomerase large subunit YP_002219232.1 735846 D 380394 CDS YP_002219233.1 198282912 6876740 737406..738029 1 NC_011206.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 738029 leuD 6876740 leuD Acidithiobacillus ferrooxidans ATCC 53993 isopropylmalate isomerase small subunit YP_002219233.1 737406 D 380394 CDS YP_002219234.1 198282913 6876741 738050..738364 1 NC_011206.1 hypothetical protein 738364 6876741 Lferr_0777 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219234.1 738050 D 380394 CDS YP_002219235.1 198282914 6876742 complement(738381..739037) 1 NC_011206.1 KEGG: rca:Rcas_1067 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 739037 6876742 Lferr_0778 Acidithiobacillus ferrooxidans ATCC 53993 pyridoxamine 5'-phosphate oxidase YP_002219235.1 738381 R 380394 CDS YP_002219236.1 198282915 6876743 complement(739069..739728) 1 NC_011206.1 KEGG: aeh:Mlg_0086 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 739728 6876743 Lferr_0779 Acidithiobacillus ferrooxidans ATCC 53993 ribose 5-phosphate isomerase YP_002219236.1 739069 R 380394 CDS YP_002219237.1 198282916 6876744 complement(739718..740470) 1 NC_011206.1 PFAM: ThiJ/PfpI domain protein; KEGG: nfa:nfa15880 hypothetical protein; ThiJ/PfpI domain-containing protein 740470 6876744 Lferr_0780 Acidithiobacillus ferrooxidans ATCC 53993 ThiJ/PfpI domain-containing protein YP_002219237.1 739718 R 380394 CDS YP_002219238.1 198282917 6876745 741236..742201 1 NC_011206.1 PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: acr:Acry_1096 cytochrome c oxidase, subunit II; COX aromatic rich domain-containing protein 742201 6876745 Lferr_0781 Acidithiobacillus ferrooxidans ATCC 53993 COX aromatic rich domain-containing protein YP_002219238.1 741236 D 380394 CDS YP_002219239.1 198282918 6876746 742221..744371 1 NC_011206.1 PFAM: cytochrome c oxidase subunit I; KEGG: acr:Acry_1095 cytochrome-c oxidase; cytochrome-c oxidase 744371 6876746 Lferr_0782 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome-c oxidase YP_002219239.1 742221 D 380394 CDS YP_002219240.1 198282919 6876747 744438..745073 1 NC_011206.1 KEGG: acr:Acry_1094 heme/copper-type cytochrome/quinol oxidase subunit 3-like protein; heme/copper-type cytochrome/quinol oxidase subunit 3-like protein 745073 6876747 Lferr_0783 Acidithiobacillus ferrooxidans ATCC 53993 heme/copper-type cytochrome/quinol oxidase subunit 3-like protein YP_002219240.1 744438 D 380394 CDS YP_002219241.1 198282920 6876748 745070..745426 1 NC_011206.1 KEGG: acr:Acry_1093 hypothetical protein; hypothetical protein 745426 6876748 Lferr_0784 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219241.1 745070 D 380394 CDS YP_002219242.1 198282921 6876749 745455..746399 1 NC_011206.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: hch:HCH_00054 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 746399 6876749 Lferr_0785 Acidithiobacillus ferrooxidans ATCC 53993 protoheme IX farnesyltransferase YP_002219242.1 745455 D 380394 CDS YP_002219243.1 198282922 6876750 746419..747621 1 NC_011206.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psp:PSPPH_4562 major facilitator family transporter; major facilitator superfamily protein 747621 6876750 Lferr_0786 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219243.1 746419 D 380394 CDS YP_002219244.1 198282923 6876751 complement(747615..748448) 1 NC_011206.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 748448 6876751 Lferr_0787 Acidithiobacillus ferrooxidans ATCC 53993 undecaprenyl pyrophosphate phosphatase YP_002219244.1 747615 R 380394 CDS YP_002219245.1 198282924 6876752 complement(748460..748936) 1 NC_011206.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: eba:ebA4816 transcription elongation factor; transcription elongation factor GreA 748936 6876752 Lferr_0788 Acidithiobacillus ferrooxidans ATCC 53993 transcription elongation factor GreA YP_002219245.1 748460 R 380394 CDS YP_002219246.1 198282925 6876753 complement(748933..752172) 1 NC_011206.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mca:MCA1852 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 752172 6876753 Lferr_0789 Acidithiobacillus ferrooxidans ATCC 53993 carbamoyl-phosphate synthase large subunit YP_002219246.1 748933 R 380394 CDS YP_002219247.1 198282926 6876754 complement(752165..753307) 1 NC_011206.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: dar:Daro_0938 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 753307 6876754 Lferr_0790 Acidithiobacillus ferrooxidans ATCC 53993 carbamoyl-phosphate synthase small subunit YP_002219247.1 752165 R 380394 CDS YP_002219248.1 198282927 6876755 753542..754228 1 NC_011206.1 KEGG: bra:BRADO1978 hypothetical protein; hypothetical protein 754228 6876755 Lferr_0791 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219248.1 753542 D 380394 CDS YP_002219249.1 198282928 6876756 754332..754532 1 NC_011206.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: xfa:XF0782 sulfur carrier protein ThiS; thiamine biosynthesis protein ThiS 754532 6876756 Lferr_0792 Acidithiobacillus ferrooxidans ATCC 53993 thiamine biosynthesis protein ThiS YP_002219249.1 754332 D 380394 CDS YP_002219250.1 198282929 6876757 754577..755359 1 NC_011206.1 PFAM: thiazole biosynthesis family protein; KEGG: mca:MCA1077 bifunctional sulfur carrier protein/thiazole synthase protein; thiazole biosynthesis family protein 755359 6876757 Lferr_0793 Acidithiobacillus ferrooxidans ATCC 53993 thiazole biosynthesis family protein YP_002219250.1 754577 D 380394 CDS YP_002219251.1 198282930 6876758 755340..755930 1 NC_011206.1 hypothetical protein 755930 6876758 Lferr_0794 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219251.1 755340 D 380394 CDS YP_002219252.1 198282931 6876759 755942..757309 1 NC_011206.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: azo:azo0868 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 757309 6876759 Lferr_0795 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_002219252.1 755942 D 380394 CDS YP_002219253.1 198282932 6876760 757341..757958 1 NC_011206.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: cvi:CV_3337 aromatic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 757958 6876760 Lferr_0796 Acidithiobacillus ferrooxidans ATCC 53993 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002219253.1 757341 D 380394 CDS YP_002219254.1 198282933 6876761 complement(757891..758742) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0107 ATPase component uncharacterized ABC-type transport system; ABC transporter-like protein 758742 6876761 Lferr_0797 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219254.1 757891 R 380394 CDS YP_002219255.1 198282934 6876762 complement(758742..759878) 1 NC_011206.1 PFAM: protein of unknown function DUF140; KEGG: mms:mma_3241 ABC transport system permease protein; hypothetical protein 759878 6876762 Lferr_0798 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219255.1 758742 R 380394 CDS YP_002219256.1 198282935 6876763 759923..760426 1 NC_011206.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: noc:Noc_1708 hypothetical protein; Water Stress and Hypersensitive response domain-containing protein 760426 6876763 Lferr_0799 Acidithiobacillus ferrooxidans ATCC 53993 Water Stress and Hypersensitive response domain-containing protein YP_002219256.1 759923 D 380394 CDS YP_002219257.1 198282936 6876764 complement(760371..761147) 1 NC_011206.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: aeh:Mlg_2849 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 761147 6876764 Lferr_0800 Acidithiobacillus ferrooxidans ATCC 53993 endonuclease/exonuclease/phosphatase YP_002219257.1 760371 R 380394 CDS YP_002219258.1 198282937 6876765 complement(761140..761490) 1 NC_011206.1 hypothetical protein 761490 6876765 Lferr_0801 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219258.1 761140 R 380394 CDS YP_002219259.1 198282938 6876766 complement(761487..762242) 1 NC_011206.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pst:PSPTO_1111 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD-binding protein 762242 6876766 Lferr_0802 Acidithiobacillus ferrooxidans ATCC 53993 UBA/THIF-type NAD/FAD-binding protein YP_002219259.1 761487 R 380394 CDS YP_002219260.1 198282939 6876767 complement(762379..763521) 1 NC_011206.1 KEGG: eba:ebA6804 hypothetical protein; hypothetical protein 763521 6876767 Lferr_0803 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219260.1 762379 R 380394 CDS YP_002219261.1 198282940 6876768 complement(763514..766021) 1 NC_011206.1 PFAM: protein of unknown function DUF214; KEGG: reh:H16_B1609 ABC-type transporter, duplicated permease domains; hypothetical protein 766021 6876768 Lferr_0804 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219261.1 763514 R 380394 CDS YP_002219262.1 198282941 6876769 complement(766018..766734) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_B1610 ABC-type transporter, ATPase component; ABC transporter-like protein 766734 6876769 Lferr_0805 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219262.1 766018 R 380394 CDS YP_002219263.1 198282942 6876771 767142..767468 1 NC_011206.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: hha:Hhal_2056 thioredoxin; thioredoxin 767468 6876771 Lferr_0806 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin YP_002219263.1 767142 D 380394 CDS YP_002219264.1 198282943 6876772 767585..768841 1 NC_011206.1 KEGG: noc:Noc_2592 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; Ribonuclease B OB region domain; SMART: AAA ATPase; Cold shock protein; transcription termination factor Rho 768841 6876772 Lferr_0807 Acidithiobacillus ferrooxidans ATCC 53993 transcription termination factor Rho YP_002219264.1 767585 D 380394 CDS YP_002219265.1 198282944 6876773 768916..769122 1 NC_011206.1 PFAM: ribosomal protein L31; KEGG: fta:FTA_1378 ribosomal protein L31; 50S ribosomal protein L31 769122 6876773 Lferr_0808 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L31 YP_002219265.1 768916 D 380394 CDS YP_002219266.1 198282945 6876774 769129..770367 1 NC_011206.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: tbd:Tbd_1181 malate dehydrogenase (oxaloacetate-decarboxylating); malate dehydrogenase 770367 6876774 Lferr_0809 Acidithiobacillus ferrooxidans ATCC 53993 malate dehydrogenase YP_002219266.1 769129 D 380394 CDS YP_002219267.1 198282946 6876775 770374..771429 1 NC_011206.1 PFAM: protein of unknown function UPF0118; KEGG: mca:MCA2709 hypothetical protein; hypothetical protein 771429 6876775 Lferr_0810 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219267.1 770374 D 380394 CDS YP_002219268.1 198282947 6876776 771700..773376 1 NC_011206.1 KEGG: afw:Anae109_4269 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 773376 6876776 Lferr_0811 Acidithiobacillus ferrooxidans ATCC 53993 dihydroxy-acid dehydratase YP_002219268.1 771700 D 380394 CDS YP_002219269.1 198282948 6876777 773383..774339 1 NC_011206.1 PFAM: protein of unknown function DUF88; KEGG: aeh:Mlg_0311 protein of unknown function DUF88; hypothetical protein 774339 6876777 Lferr_0812 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219269.1 773383 D 380394 CDS YP_002219270.1 198282949 6876778 complement(774354..775661) 1 NC_011206.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 775661 6876778 Lferr_0813 Acidithiobacillus ferrooxidans ATCC 53993 N-acetylglutamate synthase YP_002219270.1 774354 R 380394 CDS YP_002219271.1 198282950 6876779 complement(775677..775988) 1 NC_011206.1 PFAM: BolA family protein; KEGG: bur:Bcep18194_A5212 BolA-like protein; BolA family protein 775988 6876779 Lferr_0814 Acidithiobacillus ferrooxidans ATCC 53993 BolA family protein YP_002219271.1 775677 R 380394 CDS YP_002219272.1 198282951 6876780 complement(775985..776287) 1 NC_011206.1 PFAM: YCII-related; KEGG: hha:Hhal_0586 YCII-related; hypothetical protein 776287 6876780 Lferr_0815 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219272.1 775985 R 380394 CDS YP_002219273.1 198282952 6876781 complement(776370..776927) 1 NC_011206.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: reh:H16_A1516 intracellular septation protein A; intracellular septation protein A 776927 6876781 Lferr_0816 Acidithiobacillus ferrooxidans ATCC 53993 intracellular septation protein A YP_002219273.1 776370 R 380394 CDS YP_002219274.1 198282953 6876782 776990..777853 1 NC_011206.1 PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: net:Neut_0654 protein of unknown function DUF815; hypothetical protein 777853 6876782 Lferr_0817 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219274.1 776990 D 380394 CDS YP_002219275.1 198282954 6876783 complement(777938..778741) 1 NC_011206.1 PFAM: inositol monophosphatase; KEGG: noc:Noc_0719 inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 778741 6876783 Lferr_0818 Acidithiobacillus ferrooxidans ATCC 53993 inositol-phosphate phosphatase YP_002219275.1 777938 R 380394 CDS YP_002219276.1 198282955 6876784 778823..779593 1 NC_011206.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pfl:PFL_4968 RNA methyltransferase, TrmH family, group 1; TrmH family RNA methyltransferase 779593 6876784 Lferr_0819 Acidithiobacillus ferrooxidans ATCC 53993 TrmH family RNA methyltransferase YP_002219276.1 778823 D 380394 CDS YP_002219277.1 198282956 6876785 779593..780387 1 NC_011206.1 KEGG: son:SO_2262 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine O-acetyltransferase 780387 6876785 Lferr_0820 Acidithiobacillus ferrooxidans ATCC 53993 serine O-acetyltransferase YP_002219277.1 779593 D 380394 CDS YP_002219278.1 198282957 6876786 780433..780921 1 NC_011206.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pna:Pnap_2291 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 780921 6876786 Lferr_0821 Acidithiobacillus ferrooxidans ATCC 53993 BadM/Rrf2 family transcriptional regulator YP_002219278.1 780433 D 380394 CDS YP_002219279.1 198282958 6876787 780941..782206 1 NC_011206.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bte:BTH_I1875 cysteine desulfurase IscS; cysteine desulfurase IscS 782206 6876787 Lferr_0822 Acidithiobacillus ferrooxidans ATCC 53993 cysteine desulfurase IscS YP_002219279.1 780941 D 380394 CDS YP_002219280.1 198282959 6876788 782231..782662 1 NC_011206.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ngo:NGO0633 scaffold protein; FeS cluster assembly scaffold IscU 782662 6876788 Lferr_0823 Acidithiobacillus ferrooxidans ATCC 53993 FeS cluster assembly scaffold IscU YP_002219280.1 782231 D 380394 CDS YP_002219281.1 198282960 6876789 782672..782995 1 NC_011206.1 TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azo:azo2014 putative regulatory protein; iron-sulfur cluster assembly protein IscA 782995 6876789 Lferr_0824 Acidithiobacillus ferrooxidans ATCC 53993 iron-sulfur cluster assembly protein IscA YP_002219281.1 782672 D 380394 CDS YP_002219282.1 198282961 6876790 782995..783612 1 NC_011206.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: mgm:Mmc1_3059 co-chaperone Hsc20; co-chaperone Hsc20 783612 6876790 Lferr_0825 Acidithiobacillus ferrooxidans ATCC 53993 co-chaperone Hsc20 YP_002219282.1 782995 D 380394 CDS YP_002219283.1 198282962 6876791 783646..785511 1 NC_011206.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 785511 hscA 6876791 hscA Acidithiobacillus ferrooxidans ATCC 53993 chaperone protein HscA YP_002219283.1 783646 D 380394 CDS YP_002219284.1 198282963 6876792 785512..785850 1 NC_011206.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: asa:ASA_2606 ferredoxin; ferredoxin, 2Fe-2S type, ISC system 785850 6876792 Lferr_0827 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin, 2Fe-2S type, ISC system YP_002219284.1 785512 D 380394 CDS YP_002219285.1 198282964 6876793 785850..786044 1 NC_011206.1 TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: mag:amb3022 hypothetical protein; FeS assembly protein IscX 786044 6876793 Lferr_0828 Acidithiobacillus ferrooxidans ATCC 53993 FeS assembly protein IscX YP_002219285.1 785850 D 380394 CDS YP_002219286.1 198282965 6876794 786058..787116 1 NC_011206.1 PFAM: ExsB family protein; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: gme:Gmet_0873 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 787116 6876794 Lferr_0829 Acidithiobacillus ferrooxidans ATCC 53993 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_002219286.1 786058 D 380394 CDS YP_002219287.1 198282966 6876795 complement(787135..788034) 1 NC_011206.1 PFAM: Patatin; KEGG: hha:Hhal_0457 patatin; patatin 788034 6876795 Lferr_0830 Acidithiobacillus ferrooxidans ATCC 53993 patatin YP_002219287.1 787135 R 380394 CDS YP_002219288.1 198282967 6876796 788237..788344 1 NC_011206.1 KEGG: rfr:Rfer_0033 hypothetical protein; hypothetical protein 788344 6876796 Lferr_0831 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219288.1 788237 D 380394 CDS YP_002219289.1 198282968 6876797 788357..790711 1 NC_011206.1 PFAM: helicase domain protein; type III restriction protein res subunit; protein of unknown function DUF450; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: dol:Dole_0824 EcoEI R domain protein; EcoEI R domain-containing protein 790711 6876797 Lferr_0832 Acidithiobacillus ferrooxidans ATCC 53993 EcoEI R domain-containing protein YP_002219289.1 788357 D 380394 CDS YP_002219290.1 198282969 6876798 790708..792177 1 NC_011206.1 PFAM: N-6 DNA methylase; KEGG: dol:Dole_0823 N-6 DNA methylase; N-6 DNA methylase 792177 6876798 Lferr_0833 Acidithiobacillus ferrooxidans ATCC 53993 N-6 DNA methylase YP_002219290.1 790708 D 380394 CDS YP_002219291.1 198282970 6876799 792183..793157 1 NC_011206.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: gur:Gura_3598 death-on-curing family protein; death-on-curing family protein 793157 6876799 Lferr_0834 Acidithiobacillus ferrooxidans ATCC 53993 death-on-curing family protein YP_002219291.1 792183 D 380394 CDS YP_002219292.1 198282971 6876800 793157..794848 1 NC_011206.1 PFAM: restriction modification system DNA specificity domain; KEGG: swd:Swoo_0501 restriction modification system DNA specificity domain; restriction modification system DNA specificity protein 794848 6876800 Lferr_0835 Acidithiobacillus ferrooxidans ATCC 53993 restriction modification system DNA specificity protein YP_002219292.1 793157 D 380394 CDS YP_002219293.1 198282972 6876801 794859..796700 1 NC_011206.1 KEGG: bba:Bd3697 hypothetical protein; hypothetical protein 796700 6876801 Lferr_0836 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219293.1 794859 D 380394 CDS YP_002219294.1 198282973 6876802 complement(797016..797159) 1 NC_011206.1 hypothetical protein 797159 6876802 Lferr_0837 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219294.1 797016 R 380394 CDS YP_002219295.1 198282974 6876803 797189..797725 1 NC_011206.1 KEGG: dsy:DSY4578 hypothetical protein; hypothetical protein 797725 6876803 Lferr_0838 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219295.1 797189 D 380394 CDS YP_002219296.1 198282975 6876804 complement(797734..798591) 1 NC_011206.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: xac:XAC2487 formate dehydrogenase accessory protein; formate dehydrogenase family accessory protein FdhD 798591 6876804 Lferr_0839 Acidithiobacillus ferrooxidans ATCC 53993 formate dehydrogenase family accessory protein FdhD YP_002219296.1 797734 R 380394 CDS YP_002219297.1 198282976 6876805 complement(798561..798860) 1 NC_011206.1 KEGG: dac:Daci_4812 hypothetical protein; hypothetical protein 798860 6876805 Lferr_0840 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219297.1 798561 R 380394 CDS YP_002219298.1 198282977 6876806 complement(798850..801126) 1 NC_011206.1 KEGG: mfa:Mfla_0338 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase molybdopterin subunit 801126 6876806 Lferr_0841 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase molybdopterin subunit YP_002219298.1 798850 R 380394 CDS YP_002219299.1 198282978 6876807 801192..803285 1 NC_011206.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: acr:Acry_2789 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator 803285 6876807 Lferr_0842 Acidithiobacillus ferrooxidans ATCC 53993 Fis family sigma-54 specific transcriptional regulator YP_002219299.1 801192 D 380394 CDS YP_002219300.1 198282979 6876808 803333..803515 1 NC_011206.1 hypothetical protein 803515 6876808 Lferr_0843 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219300.1 803333 D 380394 CDS YP_002219301.1 198282980 6876809 803699..804283 1 NC_011206.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 804283 6876809 Lferr_0844 Acidithiobacillus ferrooxidans ATCC 53993 glutathione-dependent formaldehyde-activating protein YP_002219301.1 803699 D 380394 CDS YP_002219302.1 198282981 6876810 804382..805491 1 NC_011206.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pla:Plav_2451 alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 805491 6876810 Lferr_0845 Acidithiobacillus ferrooxidans ATCC 53993 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_002219302.1 804382 D 380394 CDS YP_002219303.1 198282982 6876811 805539..806345 1 NC_011206.1 KEGG: reu:Reut_B3999 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 806345 6876811 Lferr_0846 Acidithiobacillus ferrooxidans ATCC 53993 S-formylglutathione hydrolase YP_002219303.1 805539 D 380394 CDS YP_002219304.1 198282983 6876812 complement(806370..807332) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mfa:Mfla_1669 transcriptional regulator CysB-like protein; LysR family transcriptional regulator 807332 6876812 Lferr_0847 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219304.1 806370 R 380394 CDS YP_002219305.1 198282984 6876813 complement(807388..808836) 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bbt:BBta_0458 two-component response regulator protein; two component sigma-54 specific Fis family transcriptional regulator 808836 6876813 Lferr_0848 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002219305.1 807388 R 380394 CDS YP_002219306.1 198282985 6876814 809018..809980 1 NC_011206.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: sal:Sala_3197 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 809980 6876814 Lferr_0849 Acidithiobacillus ferrooxidans ATCC 53993 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002219306.1 809018 D 380394 CDS YP_002219307.1 198282986 6876815 810031..811629 1 NC_011206.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: bbt:BBta_0461 uptake hydrogenase large subunit; Hydrogen:quinone oxidoreductase 811629 6876815 Lferr_0850 Acidithiobacillus ferrooxidans ATCC 53993 Hydrogen:quinone oxidoreductase YP_002219307.1 810031 D 380394 CDS YP_002219308.1 198282987 6876816 811719..812039 1 NC_011206.1 KEGG: bbt:BBta_0462 hypothetical protein; hypothetical protein 812039 6876816 Lferr_0851 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219308.1 811719 D 380394 CDS YP_002219309.1 198282988 6876817 812058..812390 1 NC_011206.1 KEGG: sal:Sala_3200 hypothetical protein; hypothetical protein 812390 6876817 Lferr_0852 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219309.1 812058 D 380394 CDS YP_002219310.1 198282989 6876818 812393..812866 1 NC_011206.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: ava:Ava_3947 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 812866 6876818 Lferr_0853 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase maturation protease YP_002219310.1 812393 D 380394 CDS YP_002219311.1 198282990 6876819 812863..813192 1 NC_011206.1 KEGG: msm:MSMEG_2264 peptidase M52, hydrogen uptake protein; hypothetical protein 813192 6876819 Lferr_0854 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219311.1 812863 D 380394 CDS YP_002219312.1 198282991 6876820 813291..814271 1 NC_011206.1 KEGG: bbt:BBta_0466 hypothetical protein; hypothetical protein 814271 6876820 Lferr_0855 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219312.1 813291 D 380394 CDS YP_002219313.1 198282992 6876821 814296..814523 1 NC_011206.1 KEGG: ter:Tery_3363 hypothetical protein; hypothetical protein 814523 6876821 Lferr_0856 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219313.1 814296 D 380394 CDS YP_002219314.1 198282993 6876822 814552..814776 1 NC_011206.1 KEGG: bbt:BBta_0468 hypothetical protein; hypothetical protein 814776 6876822 Lferr_0857 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219314.1 814552 D 380394 CDS YP_002219315.1 198282994 6876823 814778..815683 1 NC_011206.1 PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: sal:Sala_3205 nitrogen-fixing NifU-like; Rieske (2Fe-2S) domain-containing protein 815683 6876823 Lferr_0858 Acidithiobacillus ferrooxidans ATCC 53993 Rieske (2Fe-2S) domain-containing protein YP_002219315.1 814778 D 380394 CDS YP_002219316.1 198282995 6876824 815676..816872 1 NC_011206.1 PFAM: NHL repeat containing protein; KEGG: sal:Sala_3206 NHL repeat; NHL repeat containing protein 816872 6876824 Lferr_0859 Acidithiobacillus ferrooxidans ATCC 53993 NHL repeat containing protein YP_002219316.1 815676 D 380394 CDS YP_002219317.1 198282996 6876825 816869..819280 1 NC_011206.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: sal:Sala_3207 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 819280 6876825 Lferr_0860 Acidithiobacillus ferrooxidans ATCC 53993 (NiFe) hydrogenase maturation protein HypF YP_002219317.1 816869 D 380394 CDS YP_002219318.1 198282997 6876826 819271..819564 1 NC_011206.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: ana:asr0695 hydrogenase expression/formation protein; hydrogenase assembly chaperone HypC/HupF 819564 6876826 Lferr_0861 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase assembly chaperone HypC/HupF YP_002219318.1 819271 D 380394 CDS YP_002219319.1 198282998 6876827 819580..820278 1 NC_011206.1 TIGRFAM: phosphoheptose isomerase; KEGG: bbt:BBta_0473 D-sedoheptulose 7-phosphate isomerase; phosphoheptose isomerase 820278 6876827 Lferr_0862 Acidithiobacillus ferrooxidans ATCC 53993 phosphoheptose isomerase YP_002219319.1 819580 D 380394 CDS YP_002219320.1 198282999 6876828 820262..821407 1 NC_011206.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: bbt:BBta_0474 hydrogenase expression/formation; hydrogenase expression/formation protein HypD 821407 6876828 Lferr_0863 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase expression/formation protein HypD YP_002219320.1 820262 D 380394 CDS YP_002219321.1 198283000 6876829 821407..822465 1 NC_011206.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: xau:Xaut_2187 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 822465 6876829 Lferr_0864 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase expression/formation protein HypE YP_002219321.1 821407 D 380394 CDS YP_002219322.1 198283001 6876830 822479..822808 1 NC_011206.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: ava:Ava_4607 hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 822808 6876830 Lferr_0865 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase nickel incorporation protein HypA YP_002219322.1 822479 D 380394 CDS YP_002219323.1 198283002 6876831 822808..823725 1 NC_011206.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: sen:SACE_3076 hydrogenase nickel incorporation protein HypB; hydrogenase nickel incorporation protein HypB 823725 6876831 Lferr_0866 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase nickel incorporation protein HypB YP_002219323.1 822808 D 380394 CDS YP_002219324.1 198283003 6876832 823751..825160 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: mse:Msed_0935 amino acid permease-associated region; amino acid permease-associated protein 825160 6876832 Lferr_0867 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002219324.1 823751 D 380394 CDS YP_002219325.1 198283004 6876833 825135..826475 1 NC_011206.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc00797 putative oxidoreductase protein; FAD dependent oxidoreductase 826475 6876833 Lferr_0868 Acidithiobacillus ferrooxidans ATCC 53993 FAD dependent oxidoreductase YP_002219325.1 825135 D 380394 CDS YP_002219326.1 198283005 6876834 826560..826958 1 NC_011206.1 PFAM: globin; KEGG: aeh:Mlg_2635 globin; globin 826958 6876834 Lferr_0869 Acidithiobacillus ferrooxidans ATCC 53993 globin YP_002219326.1 826560 D 380394 CDS YP_002219327.1 198283006 6876835 complement(826973..828493) 1 NC_011206.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cya:CYA_0143 threonine dehydratase; threonine dehydratase, biosynthetic 828493 6876835 Lferr_0870 Acidithiobacillus ferrooxidans ATCC 53993 threonine dehydratase, biosynthetic YP_002219327.1 826973 R 380394 CDS YP_002219328.1 198283007 6876836 complement(828490..828861) 1 NC_011206.1 PFAM: regulatory protein LysR; KEGG: mms:mma_3664 molybdenum-binding transcriptional regulator; ModE family transcriptional regulator 828861 6876836 Lferr_0871 Acidithiobacillus ferrooxidans ATCC 53993 ModE family transcriptional regulator YP_002219328.1 828490 R 380394 CDS YP_002219329.1 198283008 6876837 complement(828858..829823) 1 NC_011206.1 PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV_3200 hypothetical protein; alpha/beta fold family hydrolase 829823 6876837 Lferr_0872 Acidithiobacillus ferrooxidans ATCC 53993 alpha/beta fold family hydrolase YP_002219329.1 828858 R 380394 CDS YP_002219330.1 198283009 6876838 complement(829820..830029) 1 NC_011206.1 KEGG: rso:RS02214 hypothetical protein; hypothetical protein 830029 6876838 Lferr_0873 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219330.1 829820 R 380394 CDS YP_002219331.1 198283010 6876839 830375..831151 1 NC_011206.1 KEGG: dar:Daro_3934 conserved hypothetical protein, predicted autoinducer synthesis protein family; autoinducer synthesis protein 831151 6876839 Lferr_0874 Acidithiobacillus ferrooxidans ATCC 53993 autoinducer synthesis protein YP_002219331.1 830375 D 380394 CDS YP_002219332.1 198283011 6876840 831148..832050 1 NC_011206.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: eba:ebA5567 putative 1-acylglycerol-3-phosphate O-acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 832050 6876840 Lferr_0875 Acidithiobacillus ferrooxidans ATCC 53993 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002219332.1 831148 D 380394 CDS YP_002219333.1 198283012 6876841 complement(832070..833134) 1 NC_011206.1 KEGG: aeh:Mlg_2765 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 833134 6876841 Lferr_0876 Acidithiobacillus ferrooxidans ATCC 53993 uroporphyrinogen decarboxylase YP_002219333.1 832070 R 380394 CDS YP_002219334.1 198283013 6876842 complement(833138..834535) 1 NC_011206.1 TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmy:Pmen_0551 glutamate synthase subunit beta; glutamate synthase small subunit 834535 6876842 Lferr_0877 Acidithiobacillus ferrooxidans ATCC 53993 glutamate synthase small subunit YP_002219334.1 833138 R 380394 CDS YP_002219335.1 198283014 6876843 complement(834559..838986) 1 NC_011206.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: aeh:Mlg_2763 glutamate synthase subunit alpha; glutamate synthase 838986 6876843 Lferr_0878 Acidithiobacillus ferrooxidans ATCC 53993 glutamate synthase YP_002219335.1 834559 R 380394 CDS YP_002219336.1 198283015 6876844 complement(839124..840296) 1 NC_011206.1 KEGG: bch:Bcen2424_0394 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 840296 6876844 Lferr_0879 Acidithiobacillus ferrooxidans ATCC 53993 deoxyguanosinetriphosphate triphosphohydrolase YP_002219336.1 839124 R 380394 CDS YP_002219337.1 198283016 6876845 complement(840289..841131) 1 NC_011206.1 TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; KEGG: mgm:Mmc1_0404 thymidylate synthase, flavin-dependent; thymidylate synthase, flavin-dependent 841131 6876845 Lferr_0880 Acidithiobacillus ferrooxidans ATCC 53993 thymidylate synthase, flavin-dependent YP_002219337.1 840289 R 380394 CDS YP_002219338.1 198283017 6876846 complement(841124..842218) 1 NC_011206.1 PFAM: 3-dehydroquinate synthase; KEGG: mms:mma_3363 bifunctional shikimate kinase/3-dehydroquinate synthase; 3-dehydroquinate synthase 842218 6876846 Lferr_0881 Acidithiobacillus ferrooxidans ATCC 53993 3-dehydroquinate synthase YP_002219338.1 841124 R 380394 CDS YP_002219339.1 198283018 6876847 complement(842324..842863) 1 NC_011206.1 PFAM: shikimate kinase; KEGG: tcx:Tcr_2137 shikimate kinase; shikimate kinase 842863 6876847 Lferr_0882 Acidithiobacillus ferrooxidans ATCC 53993 shikimate kinase YP_002219339.1 842324 R 380394 CDS YP_002219340.1 198283019 6876848 complement(842860..845214) 1 NC_011206.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mpt:Mpe_A3109 fimbrial biogenesis protein; type IV pilus secretin PilQ 845214 6876848 Lferr_0883 Acidithiobacillus ferrooxidans ATCC 53993 type IV pilus secretin PilQ YP_002219340.1 842860 R 380394 CDS YP_002219341.1 198283020 6876849 complement(845259..845807) 1 NC_011206.1 PFAM: Pilus assembly protein PilP; KEGG: pat:Patl_0668 pilus assembly protein, PilQ; Pilus assembly protein PilP 845807 6876849 Lferr_0884 Acidithiobacillus ferrooxidans ATCC 53993 Pilus assembly protein PilP YP_002219341.1 845259 R 380394 CDS YP_002219342.1 198283021 6876850 complement(845804..846457) 1 NC_011206.1 PFAM: Pilus assembly protein PilO; KEGG: mfa:Mfla_2459 pilus assembly protein, PilO; Pilus assembly protein PilO 846457 6876850 Lferr_0885 Acidithiobacillus ferrooxidans ATCC 53993 Pilus assembly protein PilO YP_002219342.1 845804 R 380394 CDS YP_002219343.1 198283022 6876851 complement(846454..847047) 1 NC_011206.1 PFAM: Fimbrial assembly family protein; KEGG: azo:azo3649 probable type 4 fimbrial biogenesis protein; fimbrial assembly family protein 847047 6876851 Lferr_0886 Acidithiobacillus ferrooxidans ATCC 53993 fimbrial assembly family protein YP_002219343.1 846454 R 380394 CDS YP_002219344.1 198283023 6876853 848337..848870 1 NC_011206.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sat:SYN_00164 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase 848870 6876853 Lferr_0888 Acidithiobacillus ferrooxidans ATCC 53993 zinc-binding CMP/dCMP deaminase YP_002219344.1 848337 D 380394 CDS YP_002219345.1 198283024 6876854 848867..849298 1 NC_011206.1 PFAM: protein of unknown function UPF0047; KEGG: mxa:MXAN_1174 conserved hypothetical protein TIGR00149; hypothetical protein 849298 6876854 Lferr_0889 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219345.1 848867 D 380394 CDS YP_002219346.1 198283025 6876855 849298..849723 1 NC_011206.1 KEGG: tbd:Tbd_0692 hypothetical protein; hypothetical protein 849723 6876855 Lferr_0890 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219346.1 849298 D 380394 CDS YP_002219347.1 198283026 6876856 849786..851324 1 NC_011206.1 PFAM: DNA mismatch repair protein MutS domain protein; KEGG: sth:STH1115 DNA mismatch repair protein; DNA mismatch repair protein MutS domain-containing protein 851324 6876856 Lferr_0891 Acidithiobacillus ferrooxidans ATCC 53993 DNA mismatch repair protein MutS domain-containing protein YP_002219347.1 849786 D 380394 CDS YP_002219348.1 198283027 6876857 851453..853198 1 NC_011206.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mfa:Mfla_2119 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 853198 6876857 Lferr_0892 Acidithiobacillus ferrooxidans ATCC 53993 acetolactate synthase large subunit YP_002219348.1 851453 D 380394 CDS YP_002219349.1 198283028 6876858 853195..853686 1 NC_011206.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: tbd:Tbd_1990 acetolactate synthase, small subunit; acetolactate synthase small subunit 853686 6876858 Lferr_0893 Acidithiobacillus ferrooxidans ATCC 53993 acetolactate synthase small subunit YP_002219349.1 853195 D 380394 CDS YP_002219350.1 198283029 6876859 853738..854754 1 NC_011206.1 KEGG: mca:MCA2272 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; CoA-binding domain protein; Acetohydroxy acid isomeroreductase catalytic domain protein; ketol-acid reductoisomerase 854754 6876859 Lferr_0894 Acidithiobacillus ferrooxidans ATCC 53993 ketol-acid reductoisomerase YP_002219350.1 853738 D 380394 CDS YP_002219351.1 198283030 6876860 854873..855535 1 NC_011206.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 855535 6876860 Lferr_0895 Acidithiobacillus ferrooxidans ATCC 53993 phosphatidylserine decarboxylase YP_002219351.1 854873 D 380394 CDS YP_002219352.1 198283031 6876861 855532..856284 1 NC_011206.1 KEGG: mca:MCA2273 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 856284 6876861 Lferr_0896 Acidithiobacillus ferrooxidans ATCC 53993 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_002219352.1 855532 D 380394 CDS YP_002219353.1 198283032 6876862 complement(856260..858134) 1 NC_011206.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 858134 6876862 Lferr_0897 Acidithiobacillus ferrooxidans ATCC 53993 pyruvate kinase YP_002219353.1 856260 R 380394 CDS YP_002219354.1 198283033 6876863 858301..858726 1 NC_011206.1 PFAM: UspA domain protein; KEGG: reh:H16_B1432 universal stress protein, UspA family; UspA domain-containing protein 858726 6876863 Lferr_0898 Acidithiobacillus ferrooxidans ATCC 53993 UspA domain-containing protein YP_002219354.1 858301 D 380394 CDS YP_002219355.1 198283034 6876864 complement(858815..859240) 1 NC_011206.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 859240 6876864 Lferr_0899 Acidithiobacillus ferrooxidans ATCC 53993 7-cyano-7-deazaguanine reductase YP_002219355.1 858815 R 380394 CDS YP_002219356.1 198283035 6876865 859301..862753 1 NC_011206.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: psa:PST_1855 chromosome segregation SMC protein, putative; chromosome segregation protein SMC 862753 6876865 Lferr_0900 Acidithiobacillus ferrooxidans ATCC 53993 chromosome segregation protein SMC YP_002219356.1 859301 D 380394 CDS YP_002219357.1 198283036 6876866 863013..863981 1 NC_011206.1 KEGG: bxe:Bxe_B2627 GAF sensor diguanylate phosphsdiesterase (EAL domain); hypothetical protein 863981 6876866 Lferr_0901 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219357.1 863013 D 380394 CDS YP_002219358.1 198283037 6876867 complement(863987..864679) 1 NC_011206.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pae:PA0335 hypothetical protein; HAD-superfamily hydrolase 864679 6876867 Lferr_0902 Acidithiobacillus ferrooxidans ATCC 53993 HAD-superfamily hydrolase YP_002219358.1 863987 R 380394 CDS YP_002219359.1 198283038 6876868 864796..866811 1 NC_011206.1 KEGG: aeh:Mlg_0681 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 866811 6876868 Lferr_0903 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent DNA ligase YP_002219359.1 864796 D 380394 CDS YP_002219360.1 198283039 6876869 866814..867329 1 NC_011206.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: bte:BTH_I3307 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 867329 6876869 Lferr_0904 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F1 subunit epsilon YP_002219360.1 866814 D 380394 CDS YP_002219361.1 198283040 6876870 867346..867996 1 NC_011206.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_0626 methyltransferase type 11; type 11 methyltransferase 867996 6876870 Lferr_0905 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002219361.1 867346 D 380394 CDS YP_002219362.1 198283041 6876871 complement(868140..868874) 1 NC_011206.1 PFAM: protein of unknown function DUF45; KEGG: sbm:Shew185_2198 protein of unknown function DUF45; hypothetical protein 868874 6876871 Lferr_0906 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219362.1 868140 R 380394 CDS YP_002219363.1 198283042 6876872 complement(869119..870027) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mrd:Mrad2831_4570 transcriptional regulator, LysR family; LysR family transcriptional regulator 870027 6876872 Lferr_0907 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219363.1 869119 R 380394 CDS YP_002219364.1 198283043 6876873 870303..872639 1 NC_011206.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1075 TonB-dependent outer membrane receptor; TonB-dependent receptor 872639 6876873 Lferr_0908 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002219364.1 870303 D 380394 CDS YP_002219365.1 198283044 6876874 872866..873672 1 NC_011206.1 PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_2237 protein of unknown function DUF81; hypothetical protein 873672 6876874 Lferr_0909 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219365.1 872866 D 380394 CDS YP_002219366.1 198283045 6876876 874407..875111 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_3610 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 875111 6876876 Lferr_0911 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002219366.1 874407 D 380394 CDS YP_002219367.1 198283046 6876877 875159..875557 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 875557 6876877 Lferr_0912 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002219367.1 875159 D 380394 CDS YP_002219368.1 198283047 6876878 875647..876405 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: acr:Acry_0296 TonB family protein; TonB family protein 876405 6876878 Lferr_0913 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002219368.1 875647 D 380394 CDS YP_002219369.1 198283048 6876879 876463..877887 1 NC_011206.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kra:Krad_3647 permease for cytosine/purines uracil thiamine allantoin; cytosine/purines uracil thiamine allantoin permease 877887 6876879 Lferr_0914 Acidithiobacillus ferrooxidans ATCC 53993 cytosine/purines uracil thiamine allantoin permease YP_002219369.1 876463 D 380394 CDS YP_002219370.1 198283049 6876880 877884..879113 1 NC_011206.1 PFAM: amidohydrolase; KEGG: reu:Reut_A2429 guanine deaminase; Guanine deaminase 879113 6876880 Lferr_0915 Acidithiobacillus ferrooxidans ATCC 53993 Guanine deaminase YP_002219370.1 877884 D 380394 CDS YP_002219371.1 198283050 6876881 879160..880203 1 NC_011206.1 KEGG: hch:HCH_01503 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 880203 6876881 Lferr_0916 Acidithiobacillus ferrooxidans ATCC 53993 adenosine deaminase YP_002219371.1 879160 D 380394 CDS YP_002219372.1 198283051 6876882 880200..881228 1 NC_011206.1 KEGG: gdi:GDI0784 putative purine nucleoside permease; purine nucleoside permease-like protein 881228 6876882 Lferr_0917 Acidithiobacillus ferrooxidans ATCC 53993 purine nucleoside permease-like protein YP_002219372.1 880200 D 380394 CDS YP_002219373.1 198283052 6876883 881290..883548 1 NC_011206.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: scl:sce5895 putative xanthine dehydrogenase; xanthine dehydrogenase 883548 6876883 Lferr_0918 Acidithiobacillus ferrooxidans ATCC 53993 xanthine dehydrogenase YP_002219373.1 881290 D 380394 CDS YP_002219374.1 198283053 6876884 883551..884000 1 NC_011206.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mta:Moth_1961 (2Fe-2S)-binding; (2Fe-2S)-binding domain-containing protein 884000 6876884 Lferr_0919 Acidithiobacillus ferrooxidans ATCC 53993 (2Fe-2S)-binding domain-containing protein YP_002219374.1 883551 D 380394 CDS YP_002219375.1 198283054 6876885 884000..884866 1 NC_011206.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: scl:sce5893 putative xanthine dehydrogenase; molybdopterin dehydrogenase FAD-binding 884866 6876885 Lferr_0920 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin dehydrogenase FAD-binding YP_002219375.1 884000 D 380394 CDS YP_002219376.1 198283055 6876886 884870..885454 1 NC_011206.1 KEGG: cyb:CYB_2111 hypothetical protein; hypothetical protein 885454 6876886 Lferr_0921 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219376.1 884870 D 380394 CDS YP_002219377.1 198283056 6876887 885473..886564 1 NC_011206.1 KEGG: mta:Moth_2120 cyanuric acid amidohydrolase; TIGRFAM: ring-opening amidohydrolase; PFAM: Amidohydrolase ring-opening AtzD/TrzD; ring-opening amidohydrolase 886564 6876887 Lferr_0922 Acidithiobacillus ferrooxidans ATCC 53993 ring-opening amidohydrolase YP_002219377.1 885473 D 380394 CDS YP_002219378.1 198283057 6876888 886561..887502 1 NC_011206.1 PFAM: protein of unknown function DUF182; KEGG: sit:TM1040_0497 protein of unknown function DUF182; hypothetical protein 887502 6876888 Lferr_0923 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219378.1 886561 D 380394 CDS YP_002219379.1 198283058 6876889 887519..887719 1 NC_011206.1 hypothetical protein 887719 6876889 Lferr_0924 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219379.1 887519 D 380394 CDS YP_002219380.1 198283059 6876890 887716..889113 1 NC_011206.1 TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; KEGG: azc:AZC_1515 glutamyl-tRNA(Gln) amidotransferase; amidohydrolase, AtzE family 889113 6876890 Lferr_0925 Acidithiobacillus ferrooxidans ATCC 53993 amidohydrolase, AtzE family YP_002219380.1 887716 D 380394 CDS YP_002219381.1 198283060 6876891 889127..889513 1 NC_011206.1 KEGG: mms:mma_3468 hypothetical protein; hypothetical protein 889513 6876891 Lferr_0926 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219381.1 889127 D 380394 CDS YP_002219382.1 198283061 6876892 889522..890130 1 NC_011206.1 KEGG: swo:Swol_1816 hypothetical protein; hypothetical protein 890130 6876892 Lferr_0927 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219382.1 889522 D 380394 CDS YP_002219383.1 198283062 6876893 890127..891746 1 NC_011206.1 KEGG: aeh:Mlg_2047 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 891746 6876893 Lferr_0928 Acidithiobacillus ferrooxidans ATCC 53993 gamma-glutamyltransferase YP_002219383.1 890127 D 380394 CDS YP_002219384.1 198283063 6876894 complement(892178..892702) 1 NC_011206.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ava:Ava_2287 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 892702 6876894 Lferr_0929 Acidithiobacillus ferrooxidans ATCC 53993 pyridoxamine 5'-phosphate oxidase-like protein YP_002219384.1 892178 R 380394 CDS YP_002219385.1 198283064 6876895 893061..893801 1 NC_011206.1 PFAM: polysaccharide deacetylase; KEGG: mpt:Mpe_A1323 polysaccharide deacetylase family protein; polysaccharide deacetylase 893801 6876895 Lferr_0930 Acidithiobacillus ferrooxidans ATCC 53993 polysaccharide deacetylase YP_002219385.1 893061 D 380394 CDS YP_002219386.1 198283065 6876896 893893..895212 1 NC_011206.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: pol:Bpro_3311 tryptophan halogenase; tryptophan halogenase 895212 6876896 Lferr_0931 Acidithiobacillus ferrooxidans ATCC 53993 tryptophan halogenase YP_002219386.1 893893 D 380394 CDS YP_002219387.1 198283066 6876897 895215..896288 1 NC_011206.1 PFAM: Endoribonuclease L-PSP; KEGG: tbd:Tbd_2762 hypothetical protein; endoribonuclease L-PSP 896288 6876897 Lferr_0932 Acidithiobacillus ferrooxidans ATCC 53993 endoribonuclease L-PSP YP_002219387.1 895215 D 380394 CDS YP_002219388.1 198283067 6876898 896285..897088 1 NC_011206.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: tbd:Tbd_2760 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 897088 6876898 Lferr_0933 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid/glycerol acyltransferase YP_002219388.1 896285 D 380394 CDS YP_002219389.1 198283068 6876899 897085..897846 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: pol:Bpro_3309 glycosyl transferase, family 2; family 2 glycosyl transferase 897846 6876899 Lferr_0934 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002219389.1 897085 D 380394 CDS YP_002219390.1 198283069 6876900 complement(897828..899174) 1 NC_011206.1 PFAM: sodium/hydrogen exchanger; KEGG: mca:MCA0928 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger 899174 6876900 Lferr_0935 Acidithiobacillus ferrooxidans ATCC 53993 sodium/hydrogen exchanger YP_002219390.1 897828 R 380394 CDS YP_002219391.1 198283070 6876901 complement(899190..899912) 1 NC_011206.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 899912 fabG 6876901 fabG Acidithiobacillus ferrooxidans ATCC 53993 3-ketoacyl-ACP reductase YP_002219391.1 899190 R 380394 CDS YP_002219392.1 198283071 6876902 complement(899905..900405) 1 NC_011206.1 KEGG: dar:Daro_4187 hypothetical protein; hypothetical protein 900405 6876902 Lferr_0937 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219392.1 899905 R 380394 CDS YP_002219393.1 198283072 6876903 complement(900396..901211) 1 NC_011206.1 KEGG: pol:Bpro_3305 hypothetical protein; hypothetical protein 901211 6876903 Lferr_0938 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219393.1 900396 R 380394 CDS YP_002219394.1 198283073 6876904 complement(901224..902417) 1 NC_011206.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 902417 6876904 Lferr_0939 Acidithiobacillus ferrooxidans ATCC 53993 3-oxoacyl-ACP synthase YP_002219394.1 901224 R 380394 CDS YP_002219395.1 198283074 6876905 902721..902987 1 NC_011206.1 KEGG: mca:MCA0914 acyl carrier protein; acyl carrier protein 902987 6876905 Lferr_0940 Acidithiobacillus ferrooxidans ATCC 53993 acyl carrier protein YP_002219395.1 902721 D 380394 CDS YP_002219396.1 198283075 6876906 complement(903061..905415) 1 NC_011206.1 KEGG: pna:Pnap_1374 hypothetical protein; hypothetical protein 905415 6876906 Lferr_0941 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219396.1 903061 R 380394 CDS YP_002219397.1 198283076 6876907 complement(905412..906128) 1 NC_011206.1 KEGG: pna:Pnap_1375 putative transmembrane protein; transmembrane protein 906128 6876907 Lferr_0942 Acidithiobacillus ferrooxidans ATCC 53993 transmembrane protein YP_002219397.1 905412 R 380394 CDS YP_002219398.1 198283077 6876908 complement(906146..907066) 1 NC_011206.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: eba:ebA7063 putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis; lipid A biosynthesis acyltransferase 907066 6876908 Lferr_0943 Acidithiobacillus ferrooxidans ATCC 53993 lipid A biosynthesis acyltransferase YP_002219398.1 906146 R 380394 CDS YP_002219399.1 198283078 6876910 complement(908736..909050) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 909050 6876910 Lferr_0945 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002219399.1 908736 R 380394 CDS YP_002219400.1 198283079 6876911 complement(909172..910491) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 910491 6876911 Lferr_0946 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219400.1 909172 R 380394 CDS YP_002219401.1 198283080 6876912 complement(910817..911557) 1 NC_011206.1 KEGG: pna:Pnap_1378 putative transmembrane protein; transmembrane protein 911557 6876912 Lferr_0947 Acidithiobacillus ferrooxidans ATCC 53993 transmembrane protein YP_002219401.1 910817 R 380394 CDS YP_002219402.1 198283081 6876913 complement(911708..912040) 1 NC_011206.1 hypothetical protein 912040 6876913 Lferr_0948 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219402.1 911708 R 380394 CDS YP_002219403.1 198283082 6876914 complement(912166..913710) 1 NC_011206.1 PFAM: GH3 auxin-responsive promoter; KEGG: gfo:GFO_0242 conserved hypothetical protein, auxin-inducible GH3 family; GH3 auxin-responsive promoter 913710 6876914 Lferr_0949 Acidithiobacillus ferrooxidans ATCC 53993 GH3 auxin-responsive promoter YP_002219403.1 912166 R 380394 CDS YP_002219404.1 198283083 6876915 complement(913707..915986) 1 NC_011206.1 PFAM: peptidase S45 penicillin amidase; KEGG: rca:Rcas_1653 peptidase S45 penicillin amidase; peptidase S45 penicillin amidase 915986 6876915 Lferr_0950 Acidithiobacillus ferrooxidans ATCC 53993 peptidase S45 penicillin amidase YP_002219404.1 913707 R 380394 CDS YP_002219405.1 198283084 6876916 complement(916282..917331) 1 NC_011206.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: acr:Acry_1124 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase FAD-binding 917331 6876916 Lferr_0951 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin dehydrogenase FAD-binding YP_002219405.1 916282 R 380394 CDS YP_002219406.1 198283085 6876917 complement(917331..919679) 1 NC_011206.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: acr:Acry_1125 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 919679 6876917 Lferr_0952 Acidithiobacillus ferrooxidans ATCC 53993 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_002219406.1 917331 R 380394 CDS YP_002219407.1 198283086 6876918 complement(919682..920209) 1 NC_011206.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bpt:Bpet3936 putative xanthine dehydrogenase; (2Fe-2S)-binding domain-containing protein 920209 6876918 Lferr_0953 Acidithiobacillus ferrooxidans ATCC 53993 (2Fe-2S)-binding domain-containing protein YP_002219407.1 919682 R 380394 CDS YP_002219408.1 198283087 6876919 complement(920457..920666) 1 NC_011206.1 hypothetical protein 920666 6876919 Lferr_0954 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219408.1 920457 R 380394 CDS YP_002219409.1 198283088 6876920 complement(920890..922287) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: neu:NE2454 MFS family transporter; major facilitator superfamily protein 922287 6876920 Lferr_0955 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219409.1 920890 R 380394 CDS YP_002219410.1 198283089 6876921 complement(922593..923978) 1 NC_011206.1 PFAM: Chloride channel core; KEGG: pla:Plav_2437 chloride channel core; chloride channel core protein 923978 6876921 Lferr_0956 Acidithiobacillus ferrooxidans ATCC 53993 chloride channel core protein YP_002219410.1 922593 R 380394 CDS YP_002219411.1 198283090 6876922 complement(923992..925839) 1 NC_011206.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: pla:Plav_2437 chloride channel core; chloride channel core protein 925839 6876922 Lferr_0957 Acidithiobacillus ferrooxidans ATCC 53993 chloride channel core protein YP_002219411.1 923992 R 380394 CDS YP_002219412.1 198283091 6876923 925929..926825 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB4177 putative transcriptional regulator; LysR family transcriptional regulator 926825 6876923 Lferr_0958 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219412.1 925929 D 380394 CDS YP_002219413.1 198283092 6876924 complement(926975..929404) 1 NC_011206.1 KEGG: gme:Gmet_3497 plasma-membrane proton-efflux P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; plasma-membrane proton-efflux P-type ATPase 929404 6876924 Lferr_0959 Acidithiobacillus ferrooxidans ATCC 53993 plasma-membrane proton-efflux P-type ATPase YP_002219413.1 926975 R 380394 CDS YP_002219414.1 198283093 6876926 complement(930558..931034) 1 NC_011206.1 KEGG: hch:HCH_00937 predicted phosphoesterases, related to the Icc protein; phosphoesterase 931034 6876926 Lferr_0961 Acidithiobacillus ferrooxidans ATCC 53993 phosphoesterase YP_002219414.1 930558 R 380394 CDS YP_002219415.1 198283094 6876927 complement(931284..931595) 1 NC_011206.1 KEGG: eba:ebA1549 hypothetical protein; hypothetical protein 931595 6876927 Lferr_0962 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219415.1 931284 R 380394 CDS YP_002219416.1 198283095 6876928 complement(931588..931845) 1 NC_011206.1 KEGG: mfa:Mfla_1455 hypothetical protein; hypothetical protein 931845 6876928 Lferr_0963 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219416.1 931588 R 380394 CDS YP_002219417.1 198283096 6876929 932139..933701 1 NC_011206.1 PFAM: N-6 DNA methylase; KEGG: ava:Ava_1159 N-6 DNA methylase; N-6 DNA methylase 933701 6876929 Lferr_0964 Acidithiobacillus ferrooxidans ATCC 53993 N-6 DNA methylase YP_002219417.1 932139 D 380394 CDS YP_002219418.1 198283097 6876930 933698..935266 1 NC_011206.1 KEGG: cph:Cpha266_0634 putative transcriptional regulator; transcriptional regulator 935266 6876930 Lferr_0965 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002219418.1 933698 D 380394 CDS YP_002219419.1 198283098 6876931 935263..936330 1 NC_011206.1 KEGG: dde:Dde_2497 hypothetical protein; hypothetical protein 936330 6876931 Lferr_0966 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219419.1 935263 D 380394 CDS YP_002219420.1 198283099 6876932 936311..937591 1 NC_011206.1 PFAM: restriction modification system DNA specificity domain; KEGG: dge:Dgeo_3109 restriction modification system DNA specificity domain; restriction modification system DNA specificity protein 937591 6876932 Lferr_0967 Acidithiobacillus ferrooxidans ATCC 53993 restriction modification system DNA specificity protein YP_002219420.1 936311 D 380394 CDS YP_002219421.1 198283100 6876933 937792..940542 1 NC_011206.1 KEGG: sbn:Sbal195_4550 hypothetical protein; hypothetical protein 940542 6876933 Lferr_0968 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219421.1 937792 D 380394 CDS YP_002219422.1 198283101 6876934 940548..943469 1 NC_011206.1 KEGG: ava:Ava_1156 type I site-specific deoxyribonuclease HsdR; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 943469 6876934 Lferr_0969 Acidithiobacillus ferrooxidans ATCC 53993 HsdR family type I site-specific deoxyribonuclease YP_002219422.1 940548 D 380394 CDS YP_002219423.1 198283102 6876935 943487..943822 1 NC_011206.1 PFAM: protein of unknown function DUF45; KEGG: ava:Ava_1155 metal-dependent hydrolase-like; hypothetical protein 943822 6876935 Lferr_0970 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219423.1 943487 D 380394 CDS YP_002219424.1 198283103 6876937 944490..946517 1 NC_011206.1 KEGG: pmy:Pmen_2737 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; SMART: DEAD-like helicases; excinuclease ABC subunit B 946517 6876937 Lferr_0971 Acidithiobacillus ferrooxidans ATCC 53993 excinuclease ABC subunit B YP_002219424.1 944490 D 380394 CDS YP_002219425.1 198283104 6876938 946622..947671 1 NC_011206.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_2697 oxidoreductase, zinc-binding; alcohol dehydrogenase GroES domain-containing protein 947671 6876938 Lferr_0972 Acidithiobacillus ferrooxidans ATCC 53993 alcohol dehydrogenase GroES domain-containing protein YP_002219425.1 946622 D 380394 CDS YP_002219426.1 198283105 6876939 947886..949523 1 NC_011206.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 949523 pyrG 6876939 pyrG Acidithiobacillus ferrooxidans ATCC 53993 CTP synthetase YP_002219426.1 947886 D 380394 CDS YP_002219427.1 198283106 6876940 949520..950365 1 NC_011206.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 950365 6876940 Lferr_0974 Acidithiobacillus ferrooxidans ATCC 53993 2-dehydro-3-deoxyphosphooctonate aldolase YP_002219427.1 949520 D 380394 CDS YP_002219428.1 198283107 6876941 950362..951642 1 NC_011206.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 951642 eno 6876941 eno Acidithiobacillus ferrooxidans ATCC 53993 phosphopyruvate hydratase YP_002219428.1 950362 D 380394 CDS YP_002219429.1 198283108 6876942 951728..952063 1 NC_011206.1 PFAM: Septum formation initiator; KEGG: mfa:Mfla_1908 septum formation initiator; septum formation initiator 952063 6876942 Lferr_0976 Acidithiobacillus ferrooxidans ATCC 53993 septum formation initiator YP_002219429.1 951728 D 380394 CDS YP_002219430.1 198283109 6876943 complement(952117..952677) 1 NC_011206.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW domain protein; Elongation factor P; KEGG: nmu:Nmul_A1268 translation elongation factor P; translation elongation factor P 952677 6876943 Lferr_0977 Acidithiobacillus ferrooxidans ATCC 53993 translation elongation factor P YP_002219430.1 952117 R 380394 CDS YP_002219431.1 198283110 6876944 952768..953070 1 NC_011206.1 PFAM: protein of unknown function DUF971; KEGG: mgm:Mmc1_1632 protein of unknown function DUF971; hypothetical protein 953070 6876944 Lferr_0978 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219431.1 952768 D 380394 CDS YP_002219432.1 198283111 6876945 953103..954974 1 NC_011206.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: aeh:Mlg_1362 excinuclease ABC subunit C; excinuclease ABC subunit C 954974 6876945 Lferr_0979 Acidithiobacillus ferrooxidans ATCC 53993 excinuclease ABC subunit C YP_002219432.1 953103 D 380394 CDS YP_002219433.1 198283112 6876946 954977..955567 1 NC_011206.1 KEGG: noc:Noc_1643 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 955567 6876946 Lferr_0980 Acidithiobacillus ferrooxidans ATCC 53993 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_002219433.1 954977 D 380394 CDS YP_002219434.1 198283113 6876949 955831..956571 1 NC_011206.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cvi:CV_2708 probable transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 956571 6876949 Lferr_0981 Acidithiobacillus ferrooxidans ATCC 53993 Crp/Fnr family transcriptional regulator YP_002219434.1 955831 D 380394 CDS YP_002219435.1 198283114 6876950 complement(956600..957013) 1 NC_011206.1 PFAM: protein of unknown function DUF488; KEGG: ace:Acel_0623 protein of unknown function DUF488; hypothetical protein 957013 6876950 Lferr_0982 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219435.1 956600 R 380394 CDS YP_002219436.1 198283115 6876951 complement(957036..958247) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A0355 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 958247 6876951 Lferr_0983 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002219436.1 957036 R 380394 CDS YP_002219437.1 198283116 6876952 complement(958329..959321) 1 NC_011206.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aeh:Mlg_2530 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 959321 6876952 Lferr_0984 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002219437.1 958329 R 380394 CDS YP_002219438.1 198283117 6876953 complement(959376..959837) 1 NC_011206.1 PFAM: globin; KEGG: amr:AM1_4406 globin domain protein; globin 959837 6876953 Lferr_0985 Acidithiobacillus ferrooxidans ATCC 53993 globin YP_002219438.1 959376 R 380394 CDS YP_002219439.1 198283118 6876954 complement(959964..961133) 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A3583 MFS efflux pump, membrane fusion protein, EmrA subfamily; secretion protein HlyD family protein 961133 6876954 Lferr_0986 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002219439.1 959964 R 380394 CDS YP_002219440.1 198283119 6876955 complement(961130..962563) 1 NC_011206.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reh:H16_A2296 outer membrane efflux protein; NodT family RND efflux system, outer membrane lipoprotein 962563 6876955 Lferr_0987 Acidithiobacillus ferrooxidans ATCC 53993 NodT family RND efflux system, outer membrane lipoprotein YP_002219440.1 961130 R 380394 CDS YP_002219441.1 198283120 6876956 complement(962563..964056) 1 NC_011206.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_1385 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 964056 6876956 Lferr_0988 Acidithiobacillus ferrooxidans ATCC 53993 EmrB/QacA subfamily drug resistance transporter YP_002219441.1 962563 R 380394 CDS YP_002219442.1 198283121 6876957 964213..965136 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3660 transcriptional regulator, LysR family; LysR family transcriptional regulator 965136 6876957 Lferr_0989 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219442.1 964213 D 380394 CDS YP_002219443.1 198283122 6876958 complement(965133..965399) 1 NC_011206.1 hypothetical protein 965399 6876958 Lferr_0990 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219443.1 965133 R 380394 CDS YP_002219444.1 198283123 6876959 complement(965462..965686) 1 NC_011206.1 hypothetical protein 965686 6876959 Lferr_0991 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219444.1 965462 R 380394 CDS YP_002219445.1 198283124 6876960 965755..966003 1 NC_011206.1 KEGG: bvi:Bcep1808_7013 RNA-directed DNA polymerase (reverse transcriptase); hypothetical protein 966003 6876960 Lferr_0992 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219445.1 965755 D 380394 CDS YP_002219446.1 198283125 6876961 966006..966392 1 NC_011206.1 PFAM: Group II intron maturase-specific domain protein; KEGG: bvi:Bcep1808_7013 RNA-directed DNA polymerase (reverse transcriptase); Group II intron maturase-specific domain-containing protein 966392 6876961 Lferr_0993 Acidithiobacillus ferrooxidans ATCC 53993 Group II intron maturase-specific domain-containing protein YP_002219446.1 966006 D 380394 CDS YP_002219447.1 198283126 6876962 966553..966795 1 NC_011206.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: eba:ebD103 putative antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 966795 6876962 Lferr_0994 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002219447.1 966553 D 380394 CDS YP_002219448.1 198283127 6876963 966792..967055 1 NC_011206.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: eba:ebD102 hypothetical protein; Txe/YoeB family addiction module toxin 967055 6876963 Lferr_0995 Acidithiobacillus ferrooxidans ATCC 53993 Txe/YoeB family addiction module toxin YP_002219448.1 966792 D 380394 CDS YP_002219449.1 198283128 6876964 967261..967665 1 NC_011206.1 PFAM: heat shock protein Hsp20; KEGG: rfr:Rfer_3005 hypothetical protein; heat shock protein Hsp20 967665 6876964 Lferr_0996 Acidithiobacillus ferrooxidans ATCC 53993 heat shock protein Hsp20 YP_002219449.1 967261 D 380394 CDS YP_002219450.1 198283129 6876965 967662..970028 1 NC_011206.1 KEGG: bbt:BBta_7794 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 970028 6876965 Lferr_0997 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent protease La YP_002219450.1 967662 D 380394 CDS YP_002219451.1 198283130 6876967 complement(971297..971773) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_4891 acetyltransferase, GNAT family; N-acetyltransferase GCN5 971773 6876967 Lferr_0999 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002219451.1 971297 R 380394 CDS YP_002219452.1 198283131 6876968 complement(971979..972524) 1 NC_011206.1 hypothetical protein 972524 6876968 Lferr_1000 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219452.1 971979 R 380394 CDS YP_002219453.1 198283132 6876969 complement(973042..973554) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_3433 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 973554 6876969 Lferr_1001 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002219453.1 973042 R 380394 CDS YP_002219454.1 198283133 6876970 complement(973610..973813) 1 NC_011206.1 KEGG: cch:Cag_1571 hypothetical protein; hypothetical protein 973813 6876970 Lferr_1002 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219454.1 973610 R 380394 CDS YP_002219455.1 198283134 6876971 complement(974146..974817) 1 NC_011206.1 PFAM: regulatory protein LysR; KEGG: bam:Bamb_6449 transcriptional regulator, LysR family; LysR family transcriptional regulator 974817 6876971 Lferr_1003 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219455.1 974146 R 380394 CDS YP_002219456.1 198283135 6876973 975628..976296 1 NC_011206.1 KEGG: bam:Bamb_6445 anti-ECFsigma factor, ChrR; anti-ECF sigma factor ChrR 976296 6876973 Lferr_1005 Acidithiobacillus ferrooxidans ATCC 53993 anti-ECF sigma factor ChrR YP_002219456.1 975628 D 380394 CDS YP_002219457.1 198283136 6876974 976293..977456 1 NC_011206.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bam:Bamb_6444 amine oxidase; amine oxidase 977456 6876974 Lferr_1006 Acidithiobacillus ferrooxidans ATCC 53993 amine oxidase YP_002219457.1 976293 D 380394 CDS YP_002219458.1 198283137 6876977 978030..978365 1 NC_011206.1 KEGG: stt:t4252 shufflon-specific DNA recombinase; shufflon-specific DNA recombinase 978365 6876977 Lferr_1009 Acidithiobacillus ferrooxidans ATCC 53993 shufflon-specific DNA recombinase YP_002219458.1 978030 D 380394 CDS YP_002219459.1 198283138 6876978 978393..978851 1 NC_011206.1 PFAM: protein of unknown function DUF74; KEGG: acr:Acry_1752 protein of unknown function DUF74; hypothetical protein 978851 6876978 Lferr_1010 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219459.1 978393 D 380394 CDS YP_002219460.1 198283139 6876979 979099..979353 1 NC_011206.1 PFAM: protein of unknown function DUF172; KEGG: bam:Bamb_4837 prevent-host-death family protein; hypothetical protein 979353 6876979 Lferr_1011 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219460.1 979099 D 380394 CDS YP_002219461.1 198283140 6876980 979343..979624 1 NC_011206.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: eca:ECA0326 putative plasmid stability protein; RelE/StbE family addiction module toxin 979624 6876980 Lferr_1012 Acidithiobacillus ferrooxidans ATCC 53993 RelE/StbE family addiction module toxin YP_002219461.1 979343 D 380394 CDS YP_002219462.1 198283141 6876981 979628..979783 1 NC_011206.1 hypothetical protein 979783 6876981 Lferr_1013 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219462.1 979628 D 380394 CDS YP_002219463.1 198283142 6876983 complement(980167..981390) 1 NC_011206.1 PFAM: protein of unknown function Met10; methyltransferase small; KEGG: tcx:Tcr_1849 methyltransferase small; methyltransferase small 981390 6876983 Lferr_1014 Acidithiobacillus ferrooxidans ATCC 53993 methyltransferase small YP_002219463.1 980167 R 380394 CDS YP_002219464.1 198283143 6876984 981545..982597 1 NC_011206.1 KEGG: pca:Pcar_2170 translation initiation factor, putative, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 982597 6876984 Lferr_1015 Acidithiobacillus ferrooxidans ATCC 53993 translation initiation factor, aIF-2BI family YP_002219464.1 981545 D 380394 CDS YP_002219465.1 198283144 6876985 982654..985191 1 NC_011206.1 KEGG: lpf:lpl1368 DNA gyrase, subunit A, type II topoisomerase; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 985191 6876985 Lferr_1016 Acidithiobacillus ferrooxidans ATCC 53993 DNA gyrase subunit A YP_002219465.1 982654 D 380394 CDS YP_002219466.1 198283145 6876986 985199..986287 1 NC_011206.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 986287 6876986 Lferr_1017 Acidithiobacillus ferrooxidans ATCC 53993 phosphoserine aminotransferase YP_002219466.1 985199 D 380394 CDS YP_002219467.1 198283146 6876987 986299..987882 1 NC_011206.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 987882 6876987 Lferr_1018 Acidithiobacillus ferrooxidans ATCC 53993 D-3-phosphoglycerate dehydrogenase YP_002219467.1 986299 D 380394 CDS YP_002219468.1 198283147 6876988 987879..988955 1 NC_011206.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: noc:Noc_0174 chorismate mutase; chorismate mutase 988955 6876988 Lferr_1019 Acidithiobacillus ferrooxidans ATCC 53993 chorismate mutase YP_002219468.1 987879 D 380394 CDS YP_002219469.1 198283148 6876989 988957..990054 1 NC_011206.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: noc:Noc_0175 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 990054 6876989 Lferr_1020 Acidithiobacillus ferrooxidans ATCC 53993 histidinol-phosphate aminotransferase YP_002219469.1 988957 D 380394 CDS YP_002219470.1 198283149 6876990 990059..991075 1 NC_011206.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: nmu:Nmul_A2194 phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 991075 6876990 Lferr_1021 Acidithiobacillus ferrooxidans ATCC 53993 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002219470.1 990059 D 380394 CDS YP_002219471.1 198283150 6876991 991077..991952 1 NC_011206.1 PFAM: Prephenate dehydrogenase; KEGG: bpt:Bpet1887 TyrA; prephenate dehydrogenase 991952 6876991 Lferr_1022 Acidithiobacillus ferrooxidans ATCC 53993 prephenate dehydrogenase YP_002219471.1 991077 D 380394 CDS YP_002219472.1 198283151 6876992 991956..993257 1 NC_011206.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: aeh:Mlg_0929 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 993257 6876992 Lferr_1023 Acidithiobacillus ferrooxidans ATCC 53993 3-phosphoshikimate 1-carboxyvinyltransferase YP_002219472.1 991956 D 380394 CDS YP_002219473.1 198283152 6876993 993254..993934 1 NC_011206.1 KEGG: aeh:Mlg_0930 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 993934 6876993 Lferr_1024 Acidithiobacillus ferrooxidans ATCC 53993 cytidylate kinase YP_002219473.1 993254 D 380394 CDS YP_002219474.1 198283153 6876994 994012..995718 1 NC_011206.1 TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; KEGG: noc:Noc_0180 30S ribosomal protein S1; 30S ribosomal protein S1 995718 6876994 Lferr_1025 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S1 YP_002219474.1 994012 D 380394 CDS YP_002219475.1 198283154 6876995 995875..996180 1 NC_011206.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: pnu:Pnuc_0501 integration host factor, beta subunit; integration host factor subunit beta 996180 6876995 Lferr_1026 Acidithiobacillus ferrooxidans ATCC 53993 integration host factor subunit beta YP_002219475.1 995875 D 380394 CDS YP_002219476.1 198283155 6876996 996194..997351 1 NC_011206.1 KEGG: aeh:Mlg_0934 hypothetical protein; hypothetical protein 997351 6876996 Lferr_1027 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219476.1 996194 D 380394 CDS YP_002219477.1 198283156 6876997 997348..998070 1 NC_011206.1 KEGG: mfa:Mfla_1067 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 998070 6876997 Lferr_1028 Acidithiobacillus ferrooxidans ATCC 53993 orotidine 5'-phosphate decarboxylase YP_002219477.1 997348 D 380394 CDS YP_002219478.1 198283157 6876998 998137..998724 1 NC_011206.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: hmo:HM1_0242 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 998724 6876998 Lferr_1029 Acidithiobacillus ferrooxidans ATCC 53993 orotate phosphoribosyltransferase YP_002219478.1 998137 D 380394 CDS YP_002219479.1 198283158 6876999 998777..1000081 1 NC_011206.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: dar:Daro_1719 trigger factor; trigger factor 1000081 6876999 Lferr_1030 Acidithiobacillus ferrooxidans ATCC 53993 trigger factor YP_002219479.1 998777 D 380394 CDS YP_002219480.1 198283159 6877000 1000127..1000771 1 NC_011206.1 KEGG: vha:VIBHAR_01417 ATP-dependent Clp protease, proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 1000771 6877000 Lferr_1031 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent Clp protease, proteolytic subunit ClpP YP_002219480.1 1000127 D 380394 CDS YP_002219481.1 198283160 6877001 1000790..1002061 1 NC_011206.1 KEGG: aeh:Mlg_2287 ATP-dependent protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA ATPase central domain protein; zinc finger C4 domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 1002061 6877001 Lferr_1032 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent Clp protease ATP-binding subunit ClpX YP_002219481.1 1000790 D 380394 CDS YP_002219482.1 198283161 6877002 1002150..1004585 1 NC_011206.1 KEGG: aeh:Mlg_2286 Lon-A peptidase. Serine peptidase. MEROPS family S16; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1004585 6877002 Lferr_1033 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent protease La YP_002219482.1 1002150 D 380394 CDS YP_002219483.1 198283162 6877003 1004593..1004799 1 NC_011206.1 hypothetical protein 1004799 6877003 Lferr_1034 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219483.1 1004593 D 380394 CDS YP_002219484.1 198283163 6877004 1004829..1005101 1 NC_011206.1 PFAM: histone family protein DNA-binding protein; KEGG: mfa:Mfla_0016 histone-like DNA-binding protein; histone family protein DNA-binding protein 1005101 6877004 Lferr_1035 Acidithiobacillus ferrooxidans ATCC 53993 histone family protein DNA-binding protein YP_002219484.1 1004829 D 380394 CDS YP_002219485.1 198283164 6877007 1005444..1007012 1 NC_011206.1 KEGG: hha:Hhal_0599 hypothetical protein; hypothetical protein 1007012 6877007 Lferr_1036 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219485.1 1005444 D 380394 CDS YP_002219486.1 198283165 6877008 complement(1007024..1007626) 1 NC_011206.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: har:HEAR1543 hypothetical protein; putative membrane protein; PA-phosphatase-like phosphoesterase 1007626 6877008 Lferr_1037 Acidithiobacillus ferrooxidans ATCC 53993 PA-phosphatase-like phosphoesterase YP_002219486.1 1007024 R 380394 CDS YP_002219487.1 198283166 6877009 complement(1007638..1008216) 1 NC_011206.1 KEGG: dar:Daro_1059 probable transmembrane protein; transmembrane protein 1008216 6877009 Lferr_1038 Acidithiobacillus ferrooxidans ATCC 53993 transmembrane protein YP_002219487.1 1007638 R 380394 CDS YP_002219488.1 198283167 6877010 1008521..1009891 1 NC_011206.1 KEGG: acr:Acry_3564 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 1009891 6877010 Lferr_1039 Acidithiobacillus ferrooxidans ATCC 53993 natural resistance-associated macrophage protein YP_002219488.1 1008521 D 380394 CDS YP_002219489.1 198283168 6877011 1009902..1010102 1 NC_011206.1 KEGG: acr:Acry_3565 hypothetical protein; hypothetical protein 1010102 6877011 Lferr_1040 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219489.1 1009902 D 380394 CDS YP_002219490.1 198283169 6877012 1010099..1011562 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4666 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 1011562 6877012 Lferr_1041 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219490.1 1010099 D 380394 CDS YP_002219491.1 198283170 6877013 complement(1011563..1012228) 1 NC_011206.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 1012228 6877013 Lferr_1042 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219491.1 1011563 R 380394 CDS YP_002219492.1 198283171 6877014 complement(1012269..1014857) 1 NC_011206.1 KEGG: hha:Hhal_1468 metal dependent phosphohydrolase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region; UTP-GlnB uridylyltransferase, GlnD 1014857 6877014 Lferr_1043 Acidithiobacillus ferrooxidans ATCC 53993 UTP-GlnB uridylyltransferase, GlnD YP_002219492.1 1012269 R 380394 CDS YP_002219493.1 198283172 6877015 complement(1014860..1015669) 1 NC_011206.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: noc:Noc_0807 peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 1015669 6877015 Lferr_1044 Acidithiobacillus ferrooxidans ATCC 53993 methionine aminopeptidase YP_002219493.1 1014860 R 380394 CDS YP_002219494.1 198283173 6877016 complement(1015688..1016386) 1 NC_011206.1 PFAM: sugar fermentation stimulation protein; KEGG: gur:Gura_1121 sugar fermentation stimulation protein; sugar fermentation stimulation protein 1016386 6877016 Lferr_1045 Acidithiobacillus ferrooxidans ATCC 53993 sugar fermentation stimulation protein YP_002219494.1 1015688 R 380394 CDS YP_002219495.1 198283174 6877017 complement(1016397..1017287) 1 NC_011206.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: aeh:Mlg_0676 glutamate--tRNA ligase; glutamate--tRNA ligase 1017287 6877017 Lferr_1046 Acidithiobacillus ferrooxidans ATCC 53993 glutamate--tRNA ligase YP_002219495.1 1016397 R 380394 CDS YP_002219496.1 198283175 6877018 1017349..1018371 1 NC_011206.1 KEGG: xom:XOO_3629 thiamine monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 1018371 6877018 Lferr_1047 Acidithiobacillus ferrooxidans ATCC 53993 thiamine-monophosphate kinase YP_002219496.1 1017349 D 380394 CDS YP_002219497.1 198283176 6877019 1018361..1018849 1 NC_011206.1 PFAM: phosphatidylglycerophosphatase A; KEGG: pat:Patl_1317 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 1018849 6877019 Lferr_1048 Acidithiobacillus ferrooxidans ATCC 53993 phosphatidylglycerophosphatase A YP_002219497.1 1018361 D 380394 CDS YP_002219498.1 198283177 6877020 1018846..1019691 1 NC_011206.1 PFAM: CinA domain protein; KEGG: eba:ebA3399 CinA-related protein (competence-inducible); CinA domain-containing protein 1019691 6877020 Lferr_1049 Acidithiobacillus ferrooxidans ATCC 53993 CinA domain-containing protein YP_002219498.1 1018846 D 380394 CDS YP_002219499.1 198283178 6877021 1019865..1020902 1 NC_011206.1 KEGG: tbd:Tbd_2197 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 1020902 6877021 Lferr_1050 Acidithiobacillus ferrooxidans ATCC 53993 recA protein YP_002219499.1 1019865 D 380394 CDS YP_002219500.1 198283179 6877022 1020903..1021355 1 NC_011206.1 PFAM: regulatory protein RecX; KEGG: hha:Hhal_1654 regulatory protein RecX; regulatory protein RecX 1021355 6877022 Lferr_1051 Acidithiobacillus ferrooxidans ATCC 53993 regulatory protein RecX YP_002219500.1 1020903 D 380394 CDS YP_002219501.1 198283180 6877023 1021425..1024058 1 NC_011206.1 KEGG: aeh:Mlg_1481 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; alanyl-tRNA synthetase 1024058 6877023 Lferr_1052 Acidithiobacillus ferrooxidans ATCC 53993 alanyl-tRNA synthetase YP_002219501.1 1021425 D 380394 CDS YP_002219502.1 198283181 6877024 complement(1024082..1024660) 1 NC_011206.1 KEGG: acr:Acry_0524 hypothetical protein; hypothetical protein 1024660 6877024 Lferr_1053 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219502.1 1024082 R 380394 CDS YP_002219503.1 198283182 6877025 complement(1024657..1025175) 1 NC_011206.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: lpn:lpg2466 hydrogenase expression/formation protein; hydrogenase maturation protease 1025175 6877025 Lferr_1054 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase maturation protease YP_002219503.1 1024657 R 380394 CDS YP_002219504.1 198283183 6877026 complement(1025172..1026470) 1 NC_011206.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: tbd:Tbd_1263 hypothetical protein; nickel-dependent hydrogenase large subunit 1026470 6877026 Lferr_1055 Acidithiobacillus ferrooxidans ATCC 53993 nickel-dependent hydrogenase large subunit YP_002219504.1 1025172 R 380394 CDS YP_002219505.1 198283184 6877027 complement(1026454..1027251) 1 NC_011206.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: lpc:LPC_2010 sulfhydrogenase delta subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1027251 6877027 Lferr_1056 Acidithiobacillus ferrooxidans ATCC 53993 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002219505.1 1026454 R 380394 CDS YP_002219506.1 198283185 6877028 complement(1027256..1028086) 1 NC_011206.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: tbd:Tbd_1261 hypothetical protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1028086 6877028 Lferr_1057 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002219506.1 1027256 R 380394 CDS YP_002219507.1 198283186 6877029 complement(1028079..1029185) 1 NC_011206.1 KEGG: tbd:Tbd_1260 hypothetical protein; hypothetical protein 1029185 6877029 Lferr_1058 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219507.1 1028079 R 380394 CDS YP_002219508.1 198283187 6877030 complement(1029262..1031238) 1 NC_011206.1 PFAM: Lytic transglycosylase catalytic; KEGG: dac:Daci_1262 lytic transglycosylase catalytic; Lytic transglycosylase 1031238 6877030 Lferr_1059 Acidithiobacillus ferrooxidans ATCC 53993 Lytic transglycosylase YP_002219508.1 1029262 R 380394 CDS YP_002219509.1 198283188 6877031 complement(1031399..1034740) 1 NC_011206.1 KEGG: dar:Daro_3870 SNF2-related:helicase, C-terminal:SWIM Zn-finger; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases; non-specific serine/threonine protein kinase 1034740 6877031 Lferr_1060 Acidithiobacillus ferrooxidans ATCC 53993 non-specific serine/threonine protein kinase YP_002219509.1 1031399 R 380394 CDS YP_002219510.1 198283189 6877032 1034917..1036371 1 NC_011206.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pde:Pden_4824 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1036371 6877032 Lferr_1061 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_002219510.1 1034917 D 380394 CDS YP_002219511.1 198283190 6877033 1036379..1036663 1 NC_011206.1 hypothetical protein 1036663 6877033 Lferr_1062 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219511.1 1036379 D 380394 CDS YP_002219512.1 198283191 6877034 complement(1036676..1038268) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppw:PputW619_2750 ABC transporter related; ABC transporter-like protein 1038268 6877034 Lferr_1063 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219512.1 1036676 R 380394 CDS YP_002219513.1 198283192 6877035 1038587..1040470 1 NC_011206.1 PFAM: thiamine biosynthesis protein ThiC; KEGG: nmu:Nmul_A2285 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 1040470 6877035 Lferr_1064 Acidithiobacillus ferrooxidans ATCC 53993 thiamine biosynthesis protein ThiC YP_002219513.1 1038587 D 380394 CDS YP_002219514.1 198283193 6877036 complement(1040496..1040960) 1 NC_011206.1 KEGG: har:HEAR3006 hypothetical protein; hypothetical protein 1040960 6877036 Lferr_1065 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219514.1 1040496 R 380394 CDS YP_002219515.1 198283194 6877037 complement(1040965..1042212) 1 NC_011206.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: dol:Dole_2404 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1042212 6877037 Lferr_1066 Acidithiobacillus ferrooxidans ATCC 53993 glucose-methanol-choline oxidoreductase YP_002219515.1 1040965 R 380394 CDS YP_002219516.1 198283195 6877038 complement(1042242..1043648) 1 NC_011206.1 PFAM: Aldehyde Dehydrogenase_; KEGG: psa:PST_3999 probable aldehyde dehydrogenase; aldehyde dehydrogenase 1043648 6877038 Lferr_1067 Acidithiobacillus ferrooxidans ATCC 53993 aldehyde dehydrogenase YP_002219516.1 1042242 R 380394 CDS YP_002219517.1 198283196 6877039 complement(1043822..1044025) 1 NC_011206.1 KEGG: acr:Acry_1633 hypothetical protein; hypothetical protein 1044025 6877039 Lferr_1068 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219517.1 1043822 R 380394 CDS YP_002219518.1 198283197 6877040 complement(1044038..1045171) 1 NC_011206.1 KEGG: acr:Acry_1634 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1045171 6877040 Lferr_1069 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome d ubiquinol oxidase subunit II YP_002219518.1 1044038 R 380394 CDS YP_002219519.1 198283198 6877041 complement(1045231..1046865) 1 NC_011206.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: acr:Acry_1635 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1046865 6877041 Lferr_1070 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome bd ubiquinol oxidase subunit I YP_002219519.1 1045231 R 380394 CDS YP_002219520.1 198283199 6877042 complement(1046876..1047610) 1 NC_011206.1 PFAM: beta-lactamase domain protein; KEGG: noc:Noc_2007 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1047610 6877042 Lferr_1071 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002219520.1 1046876 R 380394 CDS YP_002219521.1 198283200 6877043 1047916..1049271 1 NC_011206.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_0682 helix-turn-helix, fis-type; sigma-54 specific transcriptional regulator 1049271 6877043 Lferr_1072 Acidithiobacillus ferrooxidans ATCC 53993 sigma-54 specific transcriptional regulator YP_002219521.1 1047916 D 380394 CDS YP_002219522.1 198283201 6877044 1049255..1049911 1 NC_011206.1 PFAM: phospholipase/Carboxylesterase; KEGG: cbd:COXBU7E912_2074 phospholipase/carboxylesterase family protein; phospholipase/carboxylesterase 1049911 6877044 Lferr_1073 Acidithiobacillus ferrooxidans ATCC 53993 phospholipase/carboxylesterase YP_002219522.1 1049255 D 380394 CDS YP_002219523.1 198283202 6877045 complement(1049908..1051326) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aae:aq_736 dihydrolipoamide dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1051326 6877045 Lferr_1074 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002219523.1 1049908 R 380394 CDS YP_002219524.1 198283203 6877046 1051730..1053274 1 NC_011206.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 1053274 mdoD 6877046 mdoD Acidithiobacillus ferrooxidans ATCC 53993 glucan biosynthesis protein D YP_002219524.1 1051730 D 380394 CDS YP_002219525.1 198283204 6877047 1053274..1053777 1 NC_011206.1 hypothetical protein 1053777 6877047 Lferr_1076 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219525.1 1053274 D 380394 CDS YP_002219526.1 198283205 6877048 1053780..1055858 1 NC_011206.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1055858 6877048 Lferr_1077 Acidithiobacillus ferrooxidans ATCC 53993 glucosyltransferase MdoH YP_002219526.1 1053780 D 380394 CDS YP_002219527.1 198283206 6877049 complement(1055877..1056893) 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: noc:Noc_0390 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1056893 6877049 Lferr_1078 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002219527.1 1055877 R 380394 CDS YP_002219528.1 198283207 6877050 1057020..1057469 1 NC_011206.1 PFAM: protein of unknown function DUF423; KEGG: noc:Noc_2079 protein of unknown function DUF423; hypothetical protein 1057469 6877050 Lferr_1079 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219528.1 1057020 D 380394 CDS YP_002219529.1 198283208 6877051 1057450..1057857 1 NC_011206.1 hypothetical protein 1057857 6877051 Lferr_1080 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219529.1 1057450 D 380394 CDS YP_002219530.1 198283209 6877052 complement(1057896..1059194) 1 NC_011206.1 KEGG: cya:CYA_2843 hypothetical protein; hypothetical protein 1059194 6877052 Lferr_1081 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219530.1 1057896 R 380394 CDS YP_002219531.1 198283210 6877053 complement(1059529..1062942) 1 NC_011206.1 KEGG: lpp:lpp0682 hypothetical protein; hypothetical protein 1062942 6877053 Lferr_1082 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219531.1 1059529 R 380394 CDS YP_002219532.1 198283211 6877054 complement(1062939..1063526) 1 NC_011206.1 KEGG: dar:Daro_3037 hypothetical protein; hypothetical protein 1063526 6877054 Lferr_1083 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219532.1 1062939 R 380394 CDS YP_002219533.1 198283212 6877055 complement(1063523..1064656) 1 NC_011206.1 KEGG: mms:mma_3357 type IV pilus assembly protein PilW; hypothetical protein 1064656 6877055 Lferr_1084 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219533.1 1063523 R 380394 CDS YP_002219534.1 198283213 6877056 complement(1064659..1065132) 1 NC_011206.1 KEGG: pca:Pcar_2158 hypothetical protein; hypothetical protein 1065132 6877056 Lferr_1085 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219534.1 1064659 R 380394 CDS YP_002219535.1 198283214 6877057 complement(1065144..1065710) 1 NC_011206.1 KEGG: dol:Dole_0486 pilin assembly protein; Tfp pilus assembly protein FimT-like protein 1065710 6877057 Lferr_1086 Acidithiobacillus ferrooxidans ATCC 53993 Tfp pilus assembly protein FimT-like protein YP_002219535.1 1065144 R 380394 CDS YP_002219536.1 198283215 6877058 complement(1065700..1066959) 1 NC_011206.1 PFAM: type II secretion system protein; KEGG: aeh:Mlg_2080 type II secretion system protein; type II secretion system protein 1066959 6877058 Lferr_1087 Acidithiobacillus ferrooxidans ATCC 53993 type II secretion system protein YP_002219536.1 1065700 R 380394 CDS YP_002219537.1 198283216 6877059 complement(1067066..1068070) 1 NC_011206.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 1068070 6877059 Lferr_1088 Acidithiobacillus ferrooxidans ATCC 53993 periplasmic protease YP_002219537.1 1067066 R 380394 CDS YP_002219538.1 198283217 6877060 1068178..1068420 1 NC_011206.1 PFAM: thiamineS protein; KEGG: hch:HCH_05869 molybdopterin converting factor, small subunit; sulfur transfer protein ThiS 1068420 6877060 Lferr_1089 Acidithiobacillus ferrooxidans ATCC 53993 sulfur transfer protein ThiS YP_002219538.1 1068178 D 380394 CDS YP_002219539.1 198283218 6877061 1068423..1068917 1 NC_011206.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: rme:Rmet_1962 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis protein MoaE 1068917 6877061 Lferr_1090 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin biosynthesis protein MoaE YP_002219539.1 1068423 D 380394 CDS YP_002219540.1 198283219 6877062 1068924..1069409 1 NC_011206.1 PFAM: protein of unknown function DUF520; KEGG: mgm:Mmc1_1670 protein of unknown function DUF520; hypothetical protein 1069409 6877062 Lferr_1091 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219540.1 1068924 D 380394 CDS YP_002219541.1 198283220 6877063 1069427..1069756 1 NC_011206.1 PFAM: Roadblock/LC7 family protein; KEGG: sco:SCO6795 hypothetical protein; Roadblock/LC7 family protein 1069756 6877063 Lferr_1092 Acidithiobacillus ferrooxidans ATCC 53993 Roadblock/LC7 family protein YP_002219541.1 1069427 D 380394 CDS YP_002219542.1 198283221 6877064 1069753..1070880 1 NC_011206.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: eba:ebA6126 glycine cleavage system aminomethyltransferase T; glycine cleavage system T protein 1070880 6877064 Lferr_1093 Acidithiobacillus ferrooxidans ATCC 53993 glycine cleavage system T protein YP_002219542.1 1069753 D 380394 CDS YP_002219543.1 198283222 6877065 1070877..1071260 1 NC_011206.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: hha:Hhal_1191 glycine cleavage system H protein; glycine cleavage system H protein 1071260 6877065 Lferr_1094 Acidithiobacillus ferrooxidans ATCC 53993 glycine cleavage system H protein YP_002219543.1 1070877 D 380394 CDS YP_002219544.1 198283223 6877066 1071266..1072609 1 NC_011206.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1072609 6877066 Lferr_1095 Acidithiobacillus ferrooxidans ATCC 53993 glycine dehydrogenase subunit 1 YP_002219544.1 1071266 D 380394 CDS YP_002219545.1 198283224 6877067 1072606..1074057 1 NC_011206.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1074057 6877067 Lferr_1096 Acidithiobacillus ferrooxidans ATCC 53993 glycine dehydrogenase subunit 2 YP_002219545.1 1072606 D 380394 CDS YP_002219546.1 198283225 6877068 complement(1074062..1075750) 1 NC_011206.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter; ABC transporter-like protein 1075750 6877068 Lferr_1097 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219546.1 1074062 R 380394 CDS YP_002219547.1 198283226 6877069 complement(1075747..1076070) 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aeh:Mlg_1486 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1076070 6877069 Lferr_1098 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002219547.1 1075747 R 380394 CDS YP_002219548.1 198283227 6877070 1076357..1076959 1 NC_011206.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: nis:NIS_0392 peroxiredoxin, AhpC/Tsa family; alkyl hydroperoxide reductase 1076959 6877070 Lferr_1099 Acidithiobacillus ferrooxidans ATCC 53993 alkyl hydroperoxide reductase YP_002219548.1 1076357 D 380394 CDS YP_002219549.1 198283228 6877071 complement(1077058..1077783) 1 NC_011206.1 hypothetical protein 1077783 6877071 Lferr_1100 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219549.1 1077058 R 380394 CDS YP_002219550.1 198283229 6877072 1077887..1078747 1 NC_011206.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bpt:Bpet2759 hypothetical protein; PHP domain-containing protein 1078747 6877072 Lferr_1101 Acidithiobacillus ferrooxidans ATCC 53993 PHP domain-containing protein YP_002219550.1 1077887 D 380394 CDS YP_002219551.1 198283230 6877073 1078847..1079887 1 NC_011206.1 PFAM: protein of unknown function UPF0118; KEGG: rfr:Rfer_2147 protein of unknown function UPF0118; hypothetical protein 1079887 6877073 Lferr_1102 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219551.1 1078847 D 380394 CDS YP_002219552.1 198283231 6877074 1079993..1080415 1 NC_011206.1 KEGG: acr:Acry_0846 hypothetical protein; hypothetical protein 1080415 6877074 Lferr_1103 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219552.1 1079993 D 380394 CDS YP_002219553.1 198283232 6877075 1080469..1080936 1 NC_011206.1 hypothetical protein 1080936 6877075 Lferr_1104 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219553.1 1080469 D 380394 CDS YP_002219554.1 198283233 6877076 1080929..1081696 1 NC_011206.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: slo:Shew_3288 23S rRNA (guanosine-2'-O-)-methyltransferase; TrmH family RNA methyltransferase 1081696 6877076 Lferr_1105 Acidithiobacillus ferrooxidans ATCC 53993 TrmH family RNA methyltransferase YP_002219554.1 1080929 D 380394 CDS YP_002219555.1 198283234 6877077 1081721..1082494 1 NC_011206.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: eba:ebA5421 Mg-dependent DNase; TatD family hydrolase 1082494 6877077 Lferr_1106 Acidithiobacillus ferrooxidans ATCC 53993 TatD family hydrolase YP_002219555.1 1081721 D 380394 CDS YP_002219556.1 198283235 6877078 1082491..1083249 1 NC_011206.1 PFAM: beta-lactamase domain protein; KEGG: cvi:CV_3718 probable hydrolase protein; beta-lactamase domain-containing protein 1083249 6877078 Lferr_1107 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002219556.1 1082491 D 380394 CDS YP_002219557.1 198283236 6877080 1083551..1084687 1 NC_011206.1 PFAM: domain of unknown function DUF1745; KEGG: tbd:Tbd_0889 hypothetical protein; hypothetical protein 1084687 6877080 Lferr_1108 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219557.1 1083551 D 380394 CDS YP_002219558.1 198283237 6877081 1084766..1086523 1 NC_011206.1 KEGG: acr:Acry_1637 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydD 1086523 6877081 Lferr_1109 Acidithiobacillus ferrooxidans ATCC 53993 cysteine ABC transporter permease/ATP-binding protein CydD YP_002219558.1 1084766 D 380394 CDS YP_002219559.1 198283238 6877082 1086516..1088273 1 NC_011206.1 KEGG: acr:Acry_1636 beta tubulin, autoregulation binding site; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydC 1088273 6877082 Lferr_1110 Acidithiobacillus ferrooxidans ATCC 53993 cysteine ABC transporter permease/ATP-binding protein CydC YP_002219559.1 1086516 D 380394 CDS YP_002219560.1 198283239 6877083 complement(1088270..1088617) 1 NC_011206.1 hypothetical protein 1088617 6877083 Lferr_1111 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219560.1 1088270 R 380394 CDS YP_002219561.1 198283240 6877084 complement(1088621..1089586) 1 NC_011206.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: eba:ebA5412 putative glycine cleavage T-protein (Aminomethyl transferase); folate-binding protein YgfZ 1089586 6877084 Lferr_1112 Acidithiobacillus ferrooxidans ATCC 53993 folate-binding protein YgfZ YP_002219561.1 1088621 R 380394 CDS YP_002219562.1 198283241 6877085 1089603..1090100 1 NC_011206.1 hypothetical protein 1090100 6877085 Lferr_1113 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219562.1 1089603 D 380394 CDS YP_002219563.1 198283242 6877086 complement(1090045..1091634) 1 NC_011206.1 KEGG: eba:ebA5461 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; L-aspartate oxidase 1091634 6877086 Lferr_1114 Acidithiobacillus ferrooxidans ATCC 53993 L-aspartate oxidase YP_002219563.1 1090045 R 380394 CDS YP_002219564.1 198283243 6877087 1091751..1092377 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: slo:Shew_1048 RNA polymerase sigma factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 1092377 6877087 Lferr_1115 Acidithiobacillus ferrooxidans ATCC 53993 ECF subfamily RNA polymerase sigma-24 subunit YP_002219564.1 1091751 D 380394 CDS YP_002219565.1 198283244 6877088 1092374..1093036 1 NC_011206.1 KEGG: tbd:Tbd_2094 hypothetical protein; hypothetical protein 1093036 6877088 Lferr_1116 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219565.1 1092374 D 380394 CDS YP_002219566.1 198283245 6877089 1093170..1094645 1 NC_011206.1 KEGG: psa:PST_1227 serine protease MucD precursor; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1094645 6877089 Lferr_1117 Acidithiobacillus ferrooxidans ATCC 53993 protease Do YP_002219566.1 1093170 D 380394 CDS YP_002219567.1 198283246 6877090 1094751..1096553 1 NC_011206.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1096553 6877090 Lferr_1118 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein LepA YP_002219567.1 1094751 D 380394 CDS YP_002219568.1 198283247 6877091 1096620..1097411 1 NC_011206.1 KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1097411 6877091 Lferr_1119 Acidithiobacillus ferrooxidans ATCC 53993 signal peptidase I YP_002219568.1 1096620 D 380394 CDS YP_002219569.1 198283248 6877092 1097494..1097928 1 NC_011206.1 KEGG: tbd:Tbd_2087 possible transmembrane protein; hypothetical protein 1097928 6877092 Lferr_1120 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219569.1 1097494 D 380394 CDS YP_002219570.1 198283249 6877093 1097991..1098671 1 NC_011206.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: plu:plu3340 ribonuclease III; Ribonuclease III 1098671 6877093 Lferr_1121 Acidithiobacillus ferrooxidans ATCC 53993 Ribonuclease III YP_002219570.1 1097991 D 380394 CDS YP_002219571.1 198283250 6877094 1098664..1099578 1 NC_011206.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: aeh:Mlg_1348 GTP-binding protein Era; GTP-binding protein Era 1099578 6877094 Lferr_1122 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein Era YP_002219571.1 1098664 D 380394 CDS YP_002219572.1 198283251 6877095 1099568..1100335 1 NC_011206.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: asu:Asuc_0193 DNA repair protein RecO; DNA repair protein RecO 1100335 6877095 Lferr_1123 Acidithiobacillus ferrooxidans ATCC 53993 DNA repair protein RecO YP_002219572.1 1099568 D 380394 CDS YP_002219573.1 198283252 6877096 1100332..1101057 1 NC_011206.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1101057 6877096 Lferr_1124 Acidithiobacillus ferrooxidans ATCC 53993 pyridoxine 5'-phosphate synthase YP_002219573.1 1100332 D 380394 CDS YP_002219574.1 198283253 6877097 1101054..1101443 1 NC_011206.1 KEGG: aeh:Mlg_1351 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase 1101443 6877097 Lferr_1125 Acidithiobacillus ferrooxidans ATCC 53993 holo-(acyl-carrier-protein) synthase YP_002219574.1 1101054 D 380394 CDS YP_002219575.1 198283254 6877099 complement(1102156..1102470) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 1102470 6877099 Lferr_1127 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002219575.1 1102156 R 380394 CDS YP_002219576.1 198283255 6877100 complement(1102592..1103911) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1103911 6877100 Lferr_1128 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219576.1 1102592 R 380394 CDS YP_002219577.1 198283256 6877101 1104826..1105776 1 NC_011206.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: dar:Daro_1285 RfaE bifunctional protein, domain I; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 1105776 6877101 Lferr_1129 Acidithiobacillus ferrooxidans ATCC 53993 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_002219577.1 1104826 D 380394 CDS YP_002219578.1 198283257 6877102 1105778..1106548 1 NC_011206.1 PFAM: PP-loop domain protein; KEGG: tbd:Tbd_2508 putative cell cycle control ATPase; PP-loop domain-containing protein 1106548 6877102 Lferr_1130 Acidithiobacillus ferrooxidans ATCC 53993 PP-loop domain-containing protein YP_002219578.1 1105778 D 380394 CDS YP_002219579.1 198283258 6877103 1106541..1107383 1 NC_011206.1 PFAM: Hsp33 protein; KEGG: pmy:Pmen_0367 HSP33-like chaperonin; Hsp33 protein 1107383 6877103 Lferr_1131 Acidithiobacillus ferrooxidans ATCC 53993 Hsp33 protein YP_002219579.1 1106541 D 380394 CDS YP_002219580.1 198283259 6877105 complement(1108101..1108607) 1 NC_011206.1 KEGG: psa:PST_3459 hypothetical protein; hypothetical protein 1108607 6877105 Lferr_1132 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219580.1 1108101 R 380394 CDS YP_002219581.1 198283260 6877106 complement(1108604..1108933) 1 NC_011206.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; regulator PrlF 1108933 6877106 Lferr_1133 Acidithiobacillus ferrooxidans ATCC 53993 regulator PrlF YP_002219581.1 1108604 R 380394 CDS YP_002219582.1 198283261 6877107 1109220..1109363 1 NC_011206.1 hypothetical protein 1109363 6877107 Lferr_1134 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219582.1 1109220 D 380394 CDS YP_002219583.1 198283262 6877108 complement(1109390..1109656) 1 NC_011206.1 KEGG: reh:H16_A0004 type I restriction-modification system methylation subunit; type I restriction-modification system methylation subunit 1109656 6877108 Lferr_1135 Acidithiobacillus ferrooxidans ATCC 53993 type I restriction-modification system methylation subunit YP_002219583.1 1109390 R 380394 CDS YP_002219584.1 198283263 6877109 complement(1110001..1110495) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eba:ebA2001 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1110495 6877109 Lferr_1136 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002219584.1 1110001 R 380394 CDS YP_002219585.1 198283264 6877110 complement(1110492..1110764) 1 NC_011206.1 PFAM: Protein of unknown function DUF1778; KEGG: eba:ebB58 hypothetical protein; hypothetical protein 1110764 6877110 Lferr_1137 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219585.1 1110492 R 380394 CDS YP_002219586.1 198283265 6877111 complement(1110845..1111057) 1 NC_011206.1 KEGG: neu:NE2506 hypothetical protein; hypothetical protein 1111057 6877111 Lferr_1138 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219586.1 1110845 R 380394 CDS YP_002219587.1 198283266 6877113 complement(1111841..1112662) 1 NC_011206.1 PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A3012 hypothetical protein; metallophosphoesterase 1112662 6877113 Lferr_1140 Acidithiobacillus ferrooxidans ATCC 53993 metallophosphoesterase YP_002219587.1 1111841 R 380394 CDS YP_002219588.1 198283267 6877115 1113343..1114479 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: eba:ebA6942 glycosyl transferase; group 1 glycosyl transferase 1114479 6877115 Lferr_1142 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002219588.1 1113343 D 380394 CDS YP_002219589.1 198283268 6877116 1114513..1115727 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo0965 glycosyltransferase; group 1 glycosyl transferase 1115727 6877116 Lferr_1143 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002219589.1 1114513 D 380394 CDS YP_002219590.1 198283269 6877118 1116456..1117904 1 NC_011206.1 KEGG: bte:BTH_II1778 cytochrome c; cytochrome c 1117904 6877118 Lferr_1145 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c YP_002219590.1 1116456 D 380394 CDS YP_002219591.1 198283270 6877119 1117919..1118560 1 NC_011206.1 KEGG: bte:BTH_II1779 cytochrome c family protein; cytochrome c family protein 1118560 6877119 Lferr_1146 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c family protein YP_002219591.1 1117919 D 380394 CDS YP_002219592.1 198283271 6877120 complement(1118634..1119602) 1 NC_011206.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nar:Saro_3052 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1119602 6877120 Lferr_1147 Acidithiobacillus ferrooxidans ATCC 53993 cation diffusion facilitator family transporter YP_002219592.1 1118634 R 380394 CDS YP_002219593.1 198283272 6877121 1119706..1119942 1 NC_011206.1 PFAM: regulatory protein MerR; KEGG: dac:Daci_0478 transcriptional regulator, MerR family; merR family transcriptional regulator 1119942 6877121 Lferr_1148 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002219593.1 1119706 D 380394 CDS YP_002219594.1 198283273 6877122 1120018..1120560 1 NC_011206.1 hypothetical protein 1120560 6877122 Lferr_1149 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219594.1 1120018 D 380394 CDS YP_002219595.1 198283274 6877123 1120695..1121951 1 NC_011206.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A0648 putative ATP-dependent RNA helicase 1; DEAD/DEAH box helicase 1121951 6877123 Lferr_1150 Acidithiobacillus ferrooxidans ATCC 53993 DEAD/DEAH box helicase YP_002219595.1 1120695 D 380394 CDS YP_002219596.1 198283275 6877124 1122071..1122802 1 NC_011206.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tbd:Tbd_0216 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1122802 6877124 Lferr_1151 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002219596.1 1122071 D 380394 CDS YP_002219597.1 198283276 6877125 1122864..1124192 1 NC_011206.1 KEGG: pmy:Pmen_4407 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1124192 6877125 Lferr_1152 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002219597.1 1122864 D 380394 CDS YP_002219598.1 198283277 6877126 1124262..1125281 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: xac:XAC1578 phosphate binding protein; phosphate ABC transporter substrate-binding protein 1125281 6877126 Lferr_1153 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter substrate-binding protein YP_002219598.1 1124262 D 380394 CDS YP_002219599.1 198283278 6877127 1125290..1126315 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_0937 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 1126315 6877127 Lferr_1154 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter permease YP_002219599.1 1125290 D 380394 CDS YP_002219600.1 198283279 6877128 1126312..1127166 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_0936 ABC-type phosphate transport system, permease component; phosphate ABC transporter permease 1127166 6877128 Lferr_1155 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter permease YP_002219600.1 1126312 D 380394 CDS YP_002219601.1 198283280 6877129 1127166..1127933 1 NC_011206.1 KEGG: par:Psyc_1929 ABC phosphate transporter, ATPase subunit PstB; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 1127933 6877129 Lferr_1156 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter ATPase YP_002219601.1 1127166 D 380394 CDS YP_002219602.1 198283281 6877130 1127945..1128658 1 NC_011206.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: tbd:Tbd_0025 phosphate uptake regulator PhoU; phosphate uptake regulator PhoU 1128658 6877130 Lferr_1157 Acidithiobacillus ferrooxidans ATCC 53993 phosphate uptake regulator PhoU YP_002219602.1 1127945 D 380394 CDS YP_002219603.1 198283282 6877131 1128661..1130172 1 NC_011206.1 PFAM: Ppx/GppA phosphatase; KEGG: pfl:PFL_5983 exopolyphosphatase; ppx/GppA phosphatase 1130172 6877131 Lferr_1158 Acidithiobacillus ferrooxidans ATCC 53993 ppx/GppA phosphatase YP_002219603.1 1128661 D 380394 CDS YP_002219604.1 198283283 6877132 1130426..1131016 1 NC_011206.1 KEGG: pap:PSPA7_5989 hypothetical protein; hypothetical protein 1131016 6877132 Lferr_1159 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219604.1 1130426 D 380394 CDS YP_002219605.1 198283284 6877133 1131221..1131973 1 NC_011206.1 PFAM: ribosomal protein S2; KEGG: mfa:Mfla_1530 ribosomal protein S2; 30S ribosomal protein S2 1131973 6877133 Lferr_1160 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S2 YP_002219605.1 1131221 D 380394 CDS YP_002219606.1 198283285 6877134 1132001..1132879 1 NC_011206.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1132879 tsf 6877134 tsf Acidithiobacillus ferrooxidans ATCC 53993 elongation factor Ts YP_002219606.1 1132001 D 380394 CDS YP_002219607.1 198283286 6877135 1132880..1133605 1 NC_011206.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mfa:Mfla_1528 uridylate kinase; uridylate kinase 1133605 6877135 Lferr_1162 Acidithiobacillus ferrooxidans ATCC 53993 uridylate kinase YP_002219607.1 1132880 D 380394 CDS YP_002219608.1 198283287 6877136 1133602..1134162 1 NC_011206.1 PFAM: ribosome recycling factor; KEGG: lpp:lpp1676 ribosome recycling factor; ribosome recycling factor 1134162 6877136 Lferr_1163 Acidithiobacillus ferrooxidans ATCC 53993 ribosome recycling factor YP_002219608.1 1133602 D 380394 CDS YP_002219609.1 198283288 6877137 1134166..1134927 1 NC_011206.1 KEGG: mca:MCA0571 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1134927 6877137 Lferr_1164 Acidithiobacillus ferrooxidans ATCC 53993 undecaprenyl diphosphate synthase YP_002219609.1 1134166 D 380394 CDS YP_002219610.1 198283289 6877138 1134909..1135724 1 NC_011206.1 PFAM: phosphatidate cytidylyltransferase; KEGG: pst:PSPTO_1539 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1135724 6877138 Lferr_1165 Acidithiobacillus ferrooxidans ATCC 53993 phosphatidate cytidylyltransferase YP_002219610.1 1134909 D 380394 CDS YP_002219611.1 198283290 6877139 1135721..1136896 1 NC_011206.1 KEGG: rso:RSc1410 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1136896 6877139 Lferr_1166 Acidithiobacillus ferrooxidans ATCC 53993 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002219611.1 1135721 D 380394 CDS YP_002219612.1 198283291 6877140 1136912..1138270 1 NC_011206.1 KEGG: azo:azo1902 conserved hypothetical membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1138270 6877140 Lferr_1167 Acidithiobacillus ferrooxidans ATCC 53993 membrane-associated zinc metalloprotease YP_002219612.1 1136912 D 380394 CDS YP_002219613.1 198283292 6877141 1138267..1140612 1 NC_011206.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mfa:Mfla_1522 surface antigen (D15); outer membrane protein assembly complex, YaeT protein 1140612 6877141 Lferr_1168 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane protein assembly complex, YaeT protein YP_002219613.1 1138267 D 380394 CDS YP_002219614.1 198283293 6877142 1140630..1141166 1 NC_011206.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: afw:Anae109_1121 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1141166 6877142 Lferr_1169 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane chaperone Skp YP_002219614.1 1140630 D 380394 CDS YP_002219615.1 198283294 6877143 1141168..1142229 1 NC_011206.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: bmu:Bmul_1267 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1142229 6877143 Lferr_1170 Acidithiobacillus ferrooxidans ATCC 53993 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_002219615.1 1141168 D 380394 CDS YP_002219616.1 198283295 6877144 1142222..1142668 1 NC_011206.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: tbd:Tbd_0796 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; beta-hydroxyacyl-(ACP) dehydratase FabZ 1142668 6877144 Lferr_1171 Acidithiobacillus ferrooxidans ATCC 53993 beta-hydroxyacyl-(ACP) dehydratase FabZ YP_002219616.1 1142222 D 380394 CDS YP_002219617.1 198283296 6877145 1142665..1143447 1 NC_011206.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: aeh:Mlg_1852 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 1143447 6877145 Lferr_1172 Acidithiobacillus ferrooxidans ATCC 53993 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_002219617.1 1142665 D 380394 CDS YP_002219618.1 198283297 6877146 1143444..1144385 1 NC_011206.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: noc:Noc_1755 oxidoreductase; oxidoreductase domain-containing protein 1144385 6877146 Lferr_1173 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase domain-containing protein YP_002219618.1 1143444 D 380394 CDS YP_002219619.1 198283298 6877147 1144431..1145540 1 NC_011206.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pca:Pcar_1257 predicted pyridoxal phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase 1145540 6877147 Lferr_1174 Acidithiobacillus ferrooxidans ATCC 53993 DegT/DnrJ/EryC1/StrS aminotransferase YP_002219619.1 1144431 D 380394 CDS YP_002219620.1 198283299 6877148 1145545..1146672 1 NC_011206.1 KEGG: aeh:Mlg_1851 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 1146672 6877148 Lferr_1175 Acidithiobacillus ferrooxidans ATCC 53993 lipid-A-disaccharide synthase YP_002219620.1 1145545 D 380394 CDS YP_002219621.1 198283300 6877149 1146686..1147276 1 NC_011206.1 PFAM: ribonuclease HII/HIII; KEGG: tbd:Tbd_0799 ribonuclease H; ribonuclease H 1147276 6877149 Lferr_1176 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease H YP_002219621.1 1146686 D 380394 CDS YP_002219622.1 198283301 6877150 1147273..1150776 1 NC_011206.1 KEGG: hch:HCH_01861 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1150776 6877150 Lferr_1177 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit alpha YP_002219622.1 1147273 D 380394 CDS YP_002219623.1 198283302 6877151 1150811..1151761 1 NC_011206.1 KEGG: tbd:Tbd_0588 acetyl-CoA carboxylase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1151761 6877151 Lferr_1178 Acidithiobacillus ferrooxidans ATCC 53993 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_002219623.1 1150811 D 380394 CDS YP_002219624.1 198283303 6877152 1151739..1153133 1 NC_011206.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: phosphoadenosine phosphosulfate reductase; PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: mca:MCA1805 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 1153133 6877152 Lferr_1179 Acidithiobacillus ferrooxidans ATCC 53993 tRNA(Ile)-lysidine synthetase YP_002219624.1 1151739 D 380394 CDS YP_002219625.1 198283304 6877153 complement(1153097..1154428) 1 NC_011206.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1154428 6877153 Lferr_1180 Acidithiobacillus ferrooxidans ATCC 53993 dihydroorotase YP_002219625.1 1153097 R 380394 CDS YP_002219626.1 198283305 6877154 complement(1154433..1154897) 1 NC_011206.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mca:MCA0517 DnaK suppressor protein; TraR/DksA family transcriptional regulator 1154897 6877154 Lferr_1181 Acidithiobacillus ferrooxidans ATCC 53993 TraR/DksA family transcriptional regulator YP_002219626.1 1154433 R 380394 CDS YP_002219627.1 198283306 6877155 1155064..1155828 1 NC_011206.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gvi:glr3684 probable hydrolase, CbbY protein homolog; HAD-superfamily hydrolase 1155828 6877155 Lferr_1182 Acidithiobacillus ferrooxidans ATCC 53993 HAD-superfamily hydrolase YP_002219627.1 1155064 D 380394 CDS YP_002219628.1 198283307 6877156 complement(1155964..1156440) 1 NC_011206.1 PFAM: ferric-uptake regulator; KEGG: reh:H16_A0196 transcriptional regulator, Fur-family; Fur family ferric uptake regulator 1156440 6877156 Lferr_1183 Acidithiobacillus ferrooxidans ATCC 53993 Fur family ferric uptake regulator YP_002219628.1 1155964 R 380394 CDS YP_002219629.1 198283308 6877157 1156558..1157037 1 NC_011206.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mca:MCA0664 antioxidant, AhpC/Tsa family; alkyl hydroperoxide reductase 1157037 6877157 Lferr_1184 Acidithiobacillus ferrooxidans ATCC 53993 alkyl hydroperoxide reductase YP_002219629.1 1156558 D 380394 CDS YP_002219630.1 198283309 6877158 1157034..1158443 1 NC_011206.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: noc:Noc_1210 PhoH-like protein; PhoH family protein 1158443 6877158 Lferr_1185 Acidithiobacillus ferrooxidans ATCC 53993 PhoH family protein YP_002219630.1 1157034 D 380394 CDS YP_002219631.1 198283310 6877159 1158508..1160421 1 NC_011206.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1160421 6877159 Lferr_1186 Acidithiobacillus ferrooxidans ATCC 53993 arginine decarboxylase YP_002219631.1 1158508 D 380394 CDS YP_002219632.1 198283311 6877160 complement(1160386..1160814) 1 NC_011206.1 KEGG: pna:Pnap_1855 hypothetical protein; hypothetical protein 1160814 6877160 Lferr_1187 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219632.1 1160386 R 380394 CDS YP_002219633.1 198283312 6877161 complement(1160849..1161532) 1 NC_011206.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mca:MCA0263 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1161532 6877161 Lferr_1188 Acidithiobacillus ferrooxidans ATCC 53993 fumarylacetoacetate (FAA) hydrolase YP_002219633.1 1160849 R 380394 CDS YP_002219634.1 198283313 6877162 complement(1161529..1161804) 1 NC_011206.1 hypothetical protein 1161804 6877162 Lferr_1189 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219634.1 1161529 R 380394 CDS YP_002219635.1 198283314 6877163 complement(1161801..1162421) 1 NC_011206.1 PFAM: Glutathione S-transferase domain; KEGG: mca:MCA1303 glutathione S-transferase; glutathione S-transferase domain 1162421 6877163 Lferr_1190 Acidithiobacillus ferrooxidans ATCC 53993 glutathione S-transferase domain YP_002219635.1 1161801 R 380394 CDS YP_002219636.1 198283315 6877164 complement(1162421..1162774) 1 NC_011206.1 KEGG: azo:azo0637 hypothetical protein; hypothetical protein 1162774 6877164 Lferr_1191 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219636.1 1162421 R 380394 CDS YP_002219637.1 198283316 6877165 complement(1162791..1163285) 1 NC_011206.1 KEGG: mca:MCA0257 hypothetical protein; hypothetical protein 1163285 6877165 Lferr_1192 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219637.1 1162791 R 380394 CDS YP_002219638.1 198283317 6877166 complement(1163304..1163591) 1 NC_011206.1 KEGG: pna:Pnap_2316 putative ferredoxin like protein; FixX; ferredoxin-like protein FixX 1163591 6877166 Lferr_1193 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin-like protein FixX YP_002219638.1 1163304 R 380394 CDS YP_002219639.1 198283318 6877167 complement(1163588..1164886) 1 NC_011206.1 PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_5982 FAD dependent oxidoreductase; electron-transferring-flavoprotein dehydrogenase 1164886 6877167 Lferr_1194 Acidithiobacillus ferrooxidans ATCC 53993 electron-transferring-flavoprotein dehydrogenase YP_002219639.1 1163588 R 380394 CDS YP_002219640.1 198283319 6877168 complement(1164903..1165997) 1 NC_011206.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rru:Rru_A2266 electron transfer flavoprotein; electron transfer flavoprotein subunit alpha/beta 1165997 6877168 Lferr_1195 Acidithiobacillus ferrooxidans ATCC 53993 electron transfer flavoprotein subunit alpha/beta YP_002219640.1 1164903 R 380394 CDS YP_002219641.1 198283320 6877169 complement(1166017..1166859) 1 NC_011206.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_B1436 electron transfer flavoprotein, fix A (beta subunit); electron transfer flavoprotein subunit alpha/beta 1166859 6877169 Lferr_1196 Acidithiobacillus ferrooxidans ATCC 53993 electron transfer flavoprotein subunit alpha/beta YP_002219641.1 1166017 R 380394 CDS YP_002219642.1 198283321 6877170 1167364..1167975 1 NC_011206.1 PFAM: globin; KEGG: abu:Abu_1553 protozoan/cyanobacterial globin-like protein; globin 1167975 6877170 Lferr_1197 Acidithiobacillus ferrooxidans ATCC 53993 globin YP_002219642.1 1167364 D 380394 CDS YP_002219643.1 198283322 6877171 1167986..1170250 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: azo:azo3844 putative TonB-dependent receptor; TonB-dependent receptor 1170250 6877171 Lferr_1198 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002219643.1 1167986 D 380394 CDS YP_002219644.1 198283323 6877172 1170344..1171540 1 NC_011206.1 KEGG: azo:azo3844 putative TonB-dependent receptor; hypothetical protein 1171540 6877172 Lferr_1199 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219644.1 1170344 D 380394 CDS YP_002219645.1 198283324 6877173 1171553..1172206 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_1460 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1172206 6877173 Lferr_1200 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002219645.1 1171553 D 380394 CDS YP_002219646.1 198283325 6877174 1172208..1172603 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1172603 6877174 Lferr_1201 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002219646.1 1172208 D 380394 CDS YP_002219647.1 198283326 6877175 1172600..1173334 1 NC_011206.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: psb:Psyr_4480 TonB, C-terminal; TonB family protein 1173334 6877175 Lferr_1202 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002219647.1 1172600 D 380394 CDS YP_002219648.1 198283327 6877176 1173347..1173526 1 NC_011206.1 hypothetical protein 1173526 6877176 Lferr_1203 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219648.1 1173347 D 380394 CDS YP_002219649.1 198283328 6877177 1173511..1174569 1 NC_011206.1 PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein; periplasmic-binding protein 1174569 6877177 Lferr_1204 Acidithiobacillus ferrooxidans ATCC 53993 periplasmic-binding protein YP_002219649.1 1173511 D 380394 CDS YP_002219650.1 198283329 6877178 1174566..1175549 1 NC_011206.1 PFAM: transport system permease protein; KEGG: ppd:Ppro_1462 transport system permease protein; transport system permease 1175549 6877178 Lferr_1205 Acidithiobacillus ferrooxidans ATCC 53993 transport system permease YP_002219650.1 1174566 D 380394 CDS YP_002219651.1 198283330 6877179 1175546..1176337 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_0955 ABC transporter related; ABC transporter-like protein 1176337 6877179 Lferr_1206 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002219651.1 1175546 D 380394 CDS YP_002219652.1 198283331 6877180 1176360..1177079 1 NC_011206.1 PFAM: TonB-dependent receptor plug; KEGG: gdi:GDI1162 putative TonB-dependent receptor; TonB-dependent receptor plug 1177079 6877180 Lferr_1207 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor plug YP_002219652.1 1176360 D 380394 CDS YP_002219653.1 198283332 6877181 1177134..1178453 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1178453 6877181 Lferr_1208 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219653.1 1177134 D 380394 CDS YP_002219654.1 198283333 6877182 1178575..1178889 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 1178889 6877182 Lferr_1209 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002219654.1 1178575 D 380394 CDS YP_002219655.1 198283334 6877183 1179033..1180553 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: gox:GOX1075 TonB-dependent outer membrane receptor; TonB-dependent receptor 1180553 6877183 Lferr_1210 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002219655.1 1179033 D 380394 CDS YP_002219656.1 198283335 6877184 1180581..1181300 1 NC_011206.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSp0106 putative molybdate-binding periplasmic signal peptide protein; molybdenum ABC transporter substrate-binding protein 1181300 6877184 Lferr_1211 Acidithiobacillus ferrooxidans ATCC 53993 molybdenum ABC transporter substrate-binding protein YP_002219656.1 1180581 D 380394 CDS YP_002219657.1 198283336 6877185 1181320..1182354 1 NC_011206.1 PFAM: periplasmic binding protein; KEGG: pca:Pcar_0153 ABC-type Fe3+-hydroxamate transport system, periplasmic component; periplasmic-binding protein 1182354 6877185 Lferr_1212 Acidithiobacillus ferrooxidans ATCC 53993 periplasmic-binding protein YP_002219657.1 1181320 D 380394 CDS YP_002219658.1 198283337 6877186 1182393..1183376 1 NC_011206.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: nha:Nham_0954 transport system permease protein; transport system permease 1183376 6877186 Lferr_1213 Acidithiobacillus ferrooxidans ATCC 53993 transport system permease YP_002219658.1 1182393 D 380394 CDS YP_002219659.1 198283338 6877187 complement(1183438..1184658) 1 NC_011206.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cte:CT1964 cation efflux family protein; cation diffusion facilitator family transporter 1184658 6877187 Lferr_1214 Acidithiobacillus ferrooxidans ATCC 53993 cation diffusion facilitator family transporter YP_002219659.1 1183438 R 380394 CDS YP_002219660.1 198283339 6877188 complement(1184724..1186052) 1 NC_011206.1 PFAM: outer membrane porin; KEGG: acr:Acry_0114 hypothetical protein; outer membrane porin 1186052 6877188 Lferr_1215 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane porin YP_002219660.1 1184724 R 380394 CDS YP_002219661.1 198283340 6877189 complement(1186218..1187141) 1 NC_011206.1 PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_2497 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 1187141 6877189 Lferr_1216 Acidithiobacillus ferrooxidans ATCC 53993 family 1 extracellular solute-binding protein YP_002219661.1 1186218 R 380394 CDS YP_002219662.1 198283341 6877190 1187350..1189047 1 NC_011206.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bra:BRADO1843 putative ATPase, AAA family; ATPase AAA 1189047 6877190 Lferr_1217 Acidithiobacillus ferrooxidans ATCC 53993 ATPase AAA YP_002219662.1 1187350 D 380394 CDS YP_002219663.1 198283342 6877191 1189084..1189404 1 NC_011206.1 hypothetical protein 1189404 6877191 Lferr_1218 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219663.1 1189084 D 380394 CDS YP_002219664.1 198283343 6877192 complement(1189542..1189772) 1 NC_011206.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rpe:RPE_4913 putative regulatory protein, FmdB family; FmdB family regulatory protein 1189772 6877192 Lferr_1219 Acidithiobacillus ferrooxidans ATCC 53993 FmdB family regulatory protein YP_002219664.1 1189542 R 380394 CDS YP_002219665.1 198283344 6877193 complement(1189842..1190624) 1 NC_011206.1 PFAM: Rhodanese domain protein; Ankyrin; KEGG: azc:AZC_3439 rhodanese-like protein; rhodanese domain-containing protein 1190624 6877193 Lferr_1220 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002219665.1 1189842 R 380394 CDS YP_002219666.1 198283345 6877194 complement(1190621..1192276) 1 NC_011206.1 KEGG: bbt:BBta_2171 hypothetical protein; hypothetical protein 1192276 6877194 Lferr_1221 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219666.1 1190621 R 380394 CDS YP_002219667.1 198283346 6877195 complement(1192302..1192634) 1 NC_011206.1 PFAM: nitrogen fixation protein NifW; KEGG: azo:azo0548 nitrogen fixation protein NifW; nitrogen fixation protein NifW 1192634 6877195 Lferr_1222 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen fixation protein NifW YP_002219667.1 1192302 R 380394 CDS YP_002219668.1 198283347 6877196 complement(1192670..1193446) 1 NC_011206.1 KEGG: psa:PST_1353 serine acetyltransferase (CysE-like); TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine O-acetyltransferase 1193446 6877196 Lferr_1223 Acidithiobacillus ferrooxidans ATCC 53993 serine O-acetyltransferase YP_002219668.1 1192670 R 380394 CDS YP_002219669.1 198283348 6877197 complement(1193462..1194622) 1 NC_011206.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: mca:MCA0254 homocitrate synthase; homocitrate synthase 1194622 6877197 Lferr_1224 Acidithiobacillus ferrooxidans ATCC 53993 homocitrate synthase YP_002219669.1 1193462 R 380394 CDS YP_002219670.1 198283349 6877198 complement(1194615..1195808) 1 NC_011206.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: psa:PST_1351 nitrogenase metalloclusters biosynthesis protein NifS; cysteine desulfurase NifS 1195808 6877198 Lferr_1225 Acidithiobacillus ferrooxidans ATCC 53993 cysteine desulfurase NifS YP_002219670.1 1194615 R 380394 CDS YP_002219671.1 198283350 6877199 complement(1195826..1196701) 1 NC_011206.1 TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: azo:azo0553 probable nitrogen fixation protein NifU; Fe-S cluster assembly protein NifU 1196701 6877199 Lferr_1226 Acidithiobacillus ferrooxidans ATCC 53993 Fe-S cluster assembly protein NifU YP_002219671.1 1195826 R 380394 CDS YP_002219672.1 198283351 6877200 complement(1196706..1197074) 1 NC_011206.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azo:azo0554 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 1197074 6877200 Lferr_1227 Acidithiobacillus ferrooxidans ATCC 53993 iron-sulfur cluster assembly accessory protein YP_002219672.1 1196706 R 380394 CDS YP_002219673.1 198283352 6877201 complement(1197332..1197925) 1 NC_011206.1 KEGG: pna:Pnap_2347 hypothetical protein; hypothetical protein 1197925 6877201 Lferr_1228 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219673.1 1197332 R 380394 CDS YP_002219674.1 198283353 6877202 complement(1197992..1198645) 1 NC_011206.1 PFAM: NifQ family protein; KEGG: mca:MCA0239 nitrogen fixation protein NifQ, putative; NifQ family protein 1198645 6877202 Lferr_1229 Acidithiobacillus ferrooxidans ATCC 53993 NifQ family protein YP_002219674.1 1197992 R 380394 CDS YP_002219675.1 198283354 6877203 complement(1198667..1198975) 1 NC_011206.1 TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ava:Ava_4259 4Fe-4S ferredoxin, iron-sulfur binding; ferredoxin III 1198975 6877203 Lferr_1230 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin III YP_002219675.1 1198667 R 380394 CDS YP_002219676.1 198283355 6877204 complement(1198980..1199243) 1 NC_011206.1 PFAM: protein of unknown function DUF683; KEGG: mag:amb3580 hypothetical 77 kDa protein in FixX 3'region; hypothetical protein 1199243 6877204 Lferr_1231 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219676.1 1198980 R 380394 CDS YP_002219677.1 198283356 6877205 complement(1199301..1199768) 1 NC_011206.1 TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: mca:MCA0236 hypothetical protein; nitrogen fixation protein 1199768 6877205 Lferr_1232 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen fixation protein YP_002219677.1 1199301 R 380394 CDS YP_002219678.1 198283357 6877206 complement(1199761..1200177) 1 NC_011206.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mca:MCA0235 nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX 1200177 6877206 Lferr_1233 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen fixation protein NifX YP_002219678.1 1199761 R 380394 CDS YP_002219679.1 198283358 6877207 complement(1200230..1201591) 1 NC_011206.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 1201591 6877207 Lferr_1234 Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_002219679.1 1200230 R 380394 CDS YP_002219680.1 198283359 6877208 complement(1201588..1202979) 1 NC_011206.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 1202979 6877208 Lferr_1235 Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_002219680.1 1201588 R 380394 CDS YP_002219681.1 198283360 6877209 complement(1202998..1203342) 1 NC_011206.1 PFAM: ferredoxin; KEGG: rru:Rru_A1916 ferredoxin; ferredoxin 1203342 6877209 Lferr_1236 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin YP_002219681.1 1202998 R 380394 CDS YP_002219682.1 198283361 6877210 complement(1203367..1203711) 1 NC_011206.1 PFAM: ferredoxin; KEGG: pna:Pnap_2342 ferredoxin; ferredoxin 1203711 6877210 Lferr_1237 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin YP_002219682.1 1203367 R 380394 CDS YP_002219683.1 198283362 6877211 complement(1203773..1205332) 1 NC_011206.1 KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 1205332 6877211 Lferr_1238 Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase molybdenum-iron protein subunit beta YP_002219683.1 1203773 R 380394 CDS YP_002219684.1 198283363 6877212 complement(1205411..1206886) 1 NC_011206.1 KEGG: mca:MCA0230 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 1206886 6877212 Lferr_1239 Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase molybdenum-iron protein subunit alpha YP_002219684.1 1205411 R 380394 CDS YP_002219685.1 198283364 6877213 complement(1206950..1207840) 1 NC_011206.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1207840 nifH 6877213 nifH Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase reductase YP_002219685.1 1206950 R 380394 CDS YP_002219686.1 198283365 6877214 1208299..1208685 1 NC_011206.1 KEGG: mca:MCA0228 response regulator; response regulator receiver protein 1208685 6877214 Lferr_1241 Acidithiobacillus ferrooxidans ATCC 53993 response regulator receiver protein YP_002219686.1 1208299 D 380394 CDS YP_002219687.1 198283366 6877215 1208704..1209531 1 NC_011206.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: rpe:RPE_0837 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 1209531 6877215 Lferr_1242 Acidithiobacillus ferrooxidans ATCC 53993 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_002219687.1 1208704 D 380394 CDS YP_002219688.1 198283367 6877216 1209541..1210929 1 NC_011206.1 KEGG: mag:amb1576 ADP-ribosyl-[dinitrogen reductase] glycohydrolase; TIGRFAM: nitrogenase-associated protein; ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1; arsenate reductase and related; ADP-ribosyl-(dinitrogen reductase) hydrolase 1210929 6877216 Lferr_1243 Acidithiobacillus ferrooxidans ATCC 53993 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_002219688.1 1209541 D 380394 CDS YP_002219689.1 198283368 6877217 1210955..1212592 1 NC_011206.1 KEGG: bvi:Bcep1808_5993 transcriptional regulator, NifA, fis family; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Fis family transcriptional regulator NifA 1212592 6877217 Lferr_1244 Acidithiobacillus ferrooxidans ATCC 53993 Fis family transcriptional regulator NifA YP_002219689.1 1210955 D 380394 CDS YP_002219690.1 198283369 6877218 1212917..1214485 1 NC_011206.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: xau:Xaut_0111 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 1214485 6877218 Lferr_1245 Acidithiobacillus ferrooxidans ATCC 53993 nitrogenase cofactor biosynthesis protein NifB YP_002219690.1 1212917 D 380394 CDS YP_002219691.1 198283370 6877219 1214536..1214754 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: azc:AZC_3415 2(4Fe-4S) ferredoxin; 4Fe-4S ferredoxin 1214754 6877219 Lferr_1246 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002219691.1 1214536 D 380394 CDS YP_002219692.1 198283371 6877220 1214764..1215099 1 NC_011206.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mca:MCA0206 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein 1215099 6877220 Lferr_1247 Acidithiobacillus ferrooxidans ATCC 53993 iron-sulfur cluster assembly accessory protein YP_002219692.1 1214764 D 380394 CDS YP_002219693.1 198283372 6877221 1215140..1215370 1 NC_011206.1 hypothetical protein 1215370 6877221 Lferr_1248 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219693.1 1215140 D 380394 CDS YP_002219694.1 198283373 6877222 1215367..1215876 1 NC_011206.1 KEGG: rpb:RPB_0962 hypothetical protein; hypothetical protein 1215876 6877222 Lferr_1249 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219694.1 1215367 D 380394 CDS YP_002219695.1 198283374 6877223 1215869..1216660 1 NC_011206.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bbt:BBta_5900 hypothetical protein; LRV FeS4 cluster domain-containing protein 1216660 6877223 Lferr_1250 Acidithiobacillus ferrooxidans ATCC 53993 LRV FeS4 cluster domain-containing protein YP_002219695.1 1215869 D 380394 CDS YP_002219696.1 198283375 6877224 1216648..1216950 1 NC_011206.1 PFAM: NifZ family protein; KEGG: mca:MCA0209 NifZ protein; NifZ family protein 1216950 6877224 Lferr_1251 Acidithiobacillus ferrooxidans ATCC 53993 NifZ family protein YP_002219696.1 1216648 D 380394 CDS YP_002219697.1 198283376 6877225 1216947..1217201 1 NC_011206.1 PFAM: NifZ family protein; KEGG: bbt:BBta_5898 hypothetical protein; NifZ family protein 1217201 6877225 Lferr_1252 Acidithiobacillus ferrooxidans ATCC 53993 NifZ family protein YP_002219697.1 1216947 D 380394 CDS YP_002219698.1 198283377 6877226 1217198..1218379 1 NC_011206.1 PFAM: aminotransferase class V; KEGG: dde:Dde_3079 cysteine desulfurase; class V aminotransferase 1218379 6877226 Lferr_1253 Acidithiobacillus ferrooxidans ATCC 53993 class V aminotransferase YP_002219698.1 1217198 D 380394 CDS YP_002219699.1 198283378 6877227 1218395..1218604 1 NC_011206.1 TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mca:MCA0213 hypothetical protein; nitrogen fixation protein FixT 1218604 6877227 Lferr_1254 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen fixation protein FixT YP_002219699.1 1218395 D 380394 CDS YP_002219700.1 198283379 6877228 1218609..1218881 1 NC_011206.1 KEGG: xau:Xaut_0119 hypothetical protein; hypothetical protein 1218881 6877228 Lferr_1255 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219700.1 1218609 D 380394 CDS YP_002219701.1 198283380 6877229 1218878..1220020 1 NC_011206.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: azc:AZC_3423 aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1220020 6877229 Lferr_1256 Acidithiobacillus ferrooxidans ATCC 53993 DegT/DnrJ/EryC1/StrS aminotransferase YP_002219701.1 1218878 D 380394 CDS YP_002219702.1 198283381 6877230 1220062..1220367 1 NC_011206.1 PFAM: ferredoxin; KEGG: bvi:Bcep1808_6007 ferredoxin; ferredoxin 1220367 6877230 Lferr_1257 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin YP_002219702.1 1220062 D 380394 CDS YP_002219703.1 198283382 6877231 1220378..1220602 1 NC_011206.1 KEGG: xau:Xaut_0122 hypothetical protein; hypothetical protein 1220602 6877231 Lferr_1258 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219703.1 1220378 D 380394 CDS YP_002219704.1 198283383 6877232 1220615..1221442 1 NC_011206.1 KEGG: mca:MCA0218 hypothetical protein; hypothetical protein 1221442 6877232 Lferr_1259 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219704.1 1220615 D 380394 CDS YP_002219705.1 198283384 6877233 complement(1221491..1222345) 1 NC_011206.1 TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: pvi:Cvib_1491 ModD protein; modD protein 1222345 6877233 Lferr_1260 Acidithiobacillus ferrooxidans ATCC 53993 modD protein YP_002219705.1 1221491 R 380394 CDS YP_002219706.1 198283385 6877234 complement(1222469..1222675) 1 NC_011206.1 PFAM: TOBE domain protein; KEGG: rso:RSc1342 putative molybdopterin-binding protein; TOBE domain-containing protein 1222675 6877234 Lferr_1261 Acidithiobacillus ferrooxidans ATCC 53993 TOBE domain-containing protein YP_002219706.1 1222469 R 380394 CDS YP_002219707.1 198283386 6877235 complement(1222742..1224169) 1 NC_011206.1 PFAM: Aldehyde Dehydrogenase_; KEGG: ttj:TTHA0996 succinate-semialdehyde dehydrogenase; aldehyde dehydrogenase 1224169 6877235 Lferr_1262 Acidithiobacillus ferrooxidans ATCC 53993 aldehyde dehydrogenase YP_002219707.1 1222742 R 380394 CDS YP_002219708.1 198283387 6877236 1224371..1224760 1 NC_011206.1 PFAM: globin; KEGG: cvi:CV_3691 probable oxygen-binding protein; globin 1224760 6877236 Lferr_1263 Acidithiobacillus ferrooxidans ATCC 53993 globin YP_002219708.1 1224371 D 380394 CDS YP_002219709.1 198283388 6877237 complement(1224757..1226175) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2592 major facilitator superfamily MFS_1; major facilitator superfamily protein 1226175 6877237 Lferr_1264 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219709.1 1224757 R 380394 CDS YP_002219710.1 198283389 6877238 1226359..1226931 1 NC_011206.1 KEGG: asa:ASA_3751 small-conductance mechanosensitive channel; small-conductance mechanosensitive channel 1226931 6877238 Lferr_1265 Acidithiobacillus ferrooxidans ATCC 53993 small-conductance mechanosensitive channel YP_002219710.1 1226359 D 380394 CDS YP_002219711.1 198283390 6877239 1226928..1227839 1 NC_011206.1 PFAM: PfkB domain protein; KEGG: cyb:CYB_2162 kinase, PfkB family; PfkB domain-containing protein 1227839 6877239 Lferr_1266 Acidithiobacillus ferrooxidans ATCC 53993 PfkB domain-containing protein YP_002219711.1 1226928 D 380394 CDS YP_002219712.1 198283391 6877240 1227832..1229976 1 NC_011206.1 KEGG: neu:NE1213 glycosyl transferase group 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; sucrose-phosphate synthase; PFAM: glycosyl transferase group 1; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; sucrose-phosphate synthase 1229976 6877240 Lferr_1267 Acidithiobacillus ferrooxidans ATCC 53993 sucrose-phosphate synthase YP_002219712.1 1227832 D 380394 CDS YP_002219713.1 198283392 6877241 1229969..1232350 1 NC_011206.1 PFAM: sucrose synthase; glycosyl transferase group 1; KEGG: neu:NE1214 sucrose synthase:glycosyl transferase group 1; Sucrose synthase 1232350 6877241 Lferr_1268 Acidithiobacillus ferrooxidans ATCC 53993 Sucrose synthase YP_002219713.1 1229969 D 380394 CDS YP_002219714.1 198283393 6877242 complement(1232495..1233019) 1 NC_011206.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sus:Acid_4002 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 1233019 6877242 Lferr_1269 Acidithiobacillus ferrooxidans ATCC 53993 methylated-DNA--protein-cysteine methyltransferase YP_002219714.1 1232495 R 380394 CDS YP_002219715.1 198283394 6877243 complement(1233172..1233825) 1 NC_011206.1 PFAM: protein of unknown function DUF202; KEGG: aae:aq_913 hypothetical protein; hypothetical protein 1233825 6877243 Lferr_1270 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219715.1 1233172 R 380394 CDS YP_002219716.1 198283395 6877245 complement(1234079..1235074) 1 NC_011206.1 PFAM: integrase family protein; KEGG: pna:Pnap_2283 phage integrase family protein; integrase family protein 1235074 6877245 Lferr_1271 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002219716.1 1234079 R 380394 CDS YP_002219717.1 198283396 6877246 complement(1235219..1235473) 1 NC_011206.1 hypothetical protein 1235473 6877246 Lferr_1272 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219717.1 1235219 R 380394 CDS YP_002219718.1 198283397 6877247 complement(1235670..1235897) 1 NC_011206.1 hypothetical protein 1235897 6877247 Lferr_1273 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219718.1 1235670 R 380394 CDS YP_002219719.1 198283398 6877248 complement(1236172..1236630) 1 NC_011206.1 PFAM: helix-turn-helix domain protein; KEGG: ecw:EcE24377A_2252 putative transcriptional regulator DicA; XRE family transcriptional regulator 1236630 6877248 Lferr_1274 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002219719.1 1236172 R 380394 CDS YP_002219720.1 198283399 6877249 complement(1236681..1236812) 1 NC_011206.1 hypothetical protein 1236812 6877249 Lferr_1275 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219720.1 1236681 R 380394 CDS YP_002219721.1 198283400 6877250 1237205..1238113 1 NC_011206.1 KEGG: gbe:GbCGDNIH1_1591 hypothetical cytosolic protein; hypothetical protein 1238113 6877250 Lferr_1276 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219721.1 1237205 D 380394 CDS YP_002219722.1 198283401 6877251 1238124..1238978 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpl:BURPS1106A_1434 DNA replication protein DnaC, putative; IstB domain-containing ATP-binding protein 1238978 6877251 Lferr_1277 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002219722.1 1238124 D 380394 CDS YP_002219723.1 198283402 6877252 1238975..1240171 1 NC_011206.1 KEGG: reh:H16_B1949 transcriptional regulator, GntR-family; hypothetical protein 1240171 6877252 Lferr_1278 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219723.1 1238975 D 380394 CDS YP_002219724.1 198283403 6877253 1240168..1241058 1 NC_011206.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cau:Caur_0075 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 1241058 6877253 Lferr_1279 Acidithiobacillus ferrooxidans ATCC 53993 D12 class N6 adenine-specific DNA methyltransferase YP_002219724.1 1240168 D 380394 CDS YP_002219725.1 198283404 6877254 1241108..1241602 1 NC_011206.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: net:Neut_2461 single-strand binding protein; ssDNA-binding protein 1241602 6877254 Lferr_1280 Acidithiobacillus ferrooxidans ATCC 53993 ssDNA-binding protein YP_002219725.1 1241108 D 380394 CDS YP_002219726.1 198283405 6877255 1242618..1243787 1 NC_011206.1 KEGG: pfa:MAL8P1.23 ubiquitin-protein ligase 1, putative; hypothetical protein 1243787 6877255 Lferr_1281 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219726.1 1242618 D 380394 CDS YP_002219727.1 198283406 6877256 complement(1244081..1244734) 1 NC_011206.1 hypothetical protein 1244734 6877256 Lferr_1282 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219727.1 1244081 R 380394 CDS YP_002219728.1 198283407 6877257 complement(1245108..1249373) 1 NC_011206.1 KEGG: oan:Oant_4333 hypothetical protein; hypothetical protein 1249373 6877257 Lferr_1283 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219728.1 1245108 R 380394 CDS YP_002219729.1 198283408 6877258 complement(1249566..1250759) 1 NC_011206.1 KEGG: vei:Veis_1752 YeeC-like protein; YeeC-like protein 1250759 6877258 Lferr_1284 Acidithiobacillus ferrooxidans ATCC 53993 YeeC-like protein YP_002219729.1 1249566 R 380394 CDS YP_002219730.1 198283409 6877259 complement(1250752..1252863) 1 NC_011206.1 KEGG: vei:Veis_1751 YeeB-like protein; YeeB-like protein 1252863 6877259 Lferr_1285 Acidithiobacillus ferrooxidans ATCC 53993 YeeB-like protein YP_002219730.1 1250752 R 380394 CDS YP_002219731.1 198283410 6877260 complement(1253051..1253710) 1 NC_011206.1 KEGG: rsq:Rsph17025_4318 hypothetical protein; transcriptional regulator 1253710 6877260 Lferr_1286 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002219731.1 1253051 R 380394 CDS YP_002219732.1 198283411 6877261 complement(1253707..1256505) 1 NC_011206.1 KEGG: vei:Veis_1748 putative DNA methylase; DNA methylase 1256505 6877261 Lferr_1287 Acidithiobacillus ferrooxidans ATCC 53993 DNA methylase YP_002219732.1 1253707 R 380394 CDS YP_002219733.1 198283412 6877262 complement(1256560..1256808) 1 NC_011206.1 KEGG: cch:Cag_0807 DNA-methyltransferase, type I restriction-modification enzyme subunit M; hypothetical protein 1256808 6877262 Lferr_1288 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219733.1 1256560 R 380394 CDS YP_002219734.1 198283413 6877263 complement(1256907..1257281) 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: gur:Gura_3863 PilT protein domain protein; PilT protein domain-containing protein 1257281 6877263 Lferr_1289 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002219734.1 1256907 R 380394 CDS YP_002219735.1 198283414 6877264 complement(1257278..1257475) 1 NC_011206.1 KEGG: bur:Bcep18194_B0330 hypothetical protein; hypothetical protein 1257475 6877264 Lferr_1290 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219735.1 1257278 R 380394 CDS YP_002219736.1 198283415 6877265 complement(1257821..1257982) 1 NC_011206.1 hypothetical protein 1257982 6877265 Lferr_1291 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219736.1 1257821 R 380394 CDS YP_002219737.1 198283416 6877266 1258332..1259006 1 NC_011206.1 hypothetical protein 1259006 6877266 Lferr_1292 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219737.1 1258332 D 380394 CDS YP_002219738.1 198283417 6877267 1259003..1259326 1 NC_011206.1 PFAM: histone family protein DNA-binding protein; KEGG: mfa:Mfla_1997 integration host factor subunit alpha; histone family protein DNA-binding protein 1259326 6877267 Lferr_1293 Acidithiobacillus ferrooxidans ATCC 53993 histone family protein DNA-binding protein YP_002219738.1 1259003 D 380394 CDS YP_002219739.1 198283418 6877268 1259393..1259668 1 NC_011206.1 PFAM: histone family protein DNA-binding protein; KEGG: pdi:BDI_3602 DNA-binding protein HU-beta; histone family protein DNA-binding protein 1259668 6877268 Lferr_1294 Acidithiobacillus ferrooxidans ATCC 53993 histone family protein DNA-binding protein YP_002219739.1 1259393 D 380394 CDS YP_002219740.1 198283419 6877269 1259680..1260033 1 NC_011206.1 hypothetical protein 1260033 6877269 Lferr_1295 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219740.1 1259680 D 380394 CDS YP_002219741.1 198283420 6877270 1260042..1260263 1 NC_011206.1 PFAM: histone family protein DNA-binding protein; KEGG: prw:PsycPRwf_2314 histone family protein DNA-binding protein; histone family protein DNA-binding protein 1260263 6877270 Lferr_1296 Acidithiobacillus ferrooxidans ATCC 53993 histone family protein DNA-binding protein YP_002219741.1 1260042 D 380394 CDS YP_002219742.1 198283421 6877273 complement(1260987..1261256) 1 NC_011206.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: swi:Swit_5118 addiction module antitoxin, RelB/DinJ family; RelB/DinJ family addiction module antitoxin 1261256 6877273 Lferr_1299 Acidithiobacillus ferrooxidans ATCC 53993 RelB/DinJ family addiction module antitoxin YP_002219742.1 1260987 R 380394 CDS YP_002219743.1 198283422 6877274 complement(1261281..1262177) 1 NC_011206.1 KEGG: bch:Bcen2424_5789 hypothetical protein; hypothetical protein 1262177 6877274 Lferr_1300 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219743.1 1261281 R 380394 CDS YP_002219744.1 198283423 6877275 1262439..1262930 1 NC_011206.1 SMART: phospholipid/glycerol acyltransferase; KEGG: tel:tlr0042 probable acyltransferase; phospholipid/glycerol acyltransferase 1262930 6877275 Lferr_1301 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid/glycerol acyltransferase YP_002219744.1 1262439 D 380394 CDS YP_002219745.1 198283424 6877276 1262943..1263542 1 NC_011206.1 KEGG: vei:Veis_2845 hypothetical protein; hypothetical protein 1263542 6877276 Lferr_1302 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219745.1 1262943 D 380394 CDS YP_002219746.1 198283425 6877277 1263535..1264503 1 NC_011206.1 PFAM: Domain of unknown function DUF1814; KEGG: vei:Veis_2844 hypothetical protein; hypothetical protein 1264503 6877277 Lferr_1303 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219746.1 1263535 D 380394 CDS YP_002219747.1 198283426 6877278 1264639..1269012 1 NC_011206.1 PFAM: domain of unknown function DUF1738; KEGG: net:Neut_2602 hypothetical protein; hypothetical protein 1269012 6877278 Lferr_1304 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219747.1 1264639 D 380394 CDS YP_002219748.1 198283427 6877279 1269073..1270257 1 NC_011206.1 hypothetical protein 1270257 6877279 Lferr_1305 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219748.1 1269073 D 380394 CDS YP_002219749.1 198283428 6877280 1270254..1270532 1 NC_011206.1 hypothetical protein 1270532 6877280 Lferr_1306 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219749.1 1270254 D 380394 CDS YP_002219750.1 198283429 6877282 1271835..1272344 1 NC_011206.1 KEGG: tet:TTHERM_00079920 hypothetical protein PROSITE: GLN_RICH; hypothetical protein 1272344 6877282 Lferr_1308 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219750.1 1271835 D 380394 CDS YP_002219751.1 198283430 6877283 1272816..1273517 1 NC_011206.1 hypothetical protein 1273517 6877283 Lferr_1309 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219751.1 1272816 D 380394 CDS YP_002219752.1 198283431 6877284 1273779..1274360 1 NC_011206.1 KEGG: bch:Bcen2424_1258 hypothetical protein; hypothetical protein 1274360 6877284 Lferr_1310 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219752.1 1273779 D 380394 CDS YP_002219753.1 198283432 6877285 complement(1274556..1275146) 1 NC_011206.1 KEGG: pna:Pnap_4812 hypothetical protein; hypothetical protein 1275146 6877285 Lferr_1311 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219753.1 1274556 R 380394 CDS YP_002219754.1 198283433 6877286 complement(1275394..1275819) 1 NC_011206.1 KEGG: cph:Cpha266_0258 hypothetical protein; hypothetical protein 1275819 6877286 Lferr_1312 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219754.1 1275394 R 380394 CDS YP_002219755.1 198283434 6877287 complement(1276057..1276641) 1 NC_011206.1 hypothetical protein 1276641 6877287 Lferr_1313 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219755.1 1276057 R 380394 CDS YP_002219756.1 198283435 6877288 complement(1276745..1276987) 1 NC_011206.1 KEGG: gur:Gura_0787 CopG domain protein DNA-binding domain protein; CopG domain-containing DNA-binding domain-containing protein 1276987 6877288 Lferr_1314 Acidithiobacillus ferrooxidans ATCC 53993 CopG domain-containing DNA-binding domain-containing protein YP_002219756.1 1276745 R 380394 CDS YP_002219757.1 198283436 6877289 complement(1276984..1277265) 1 NC_011206.1 PFAM: protein of unknown function DUF497; KEGG: gur:Gura_1009 protein of unknown function DUF497; hypothetical protein 1277265 6877289 Lferr_1315 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219757.1 1276984 R 380394 CDS YP_002219758.1 198283437 6877290 complement(1277404..1277676) 1 NC_011206.1 hypothetical protein 1277676 6877290 Lferr_1316 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219758.1 1277404 R 380394 CDS YP_002219759.1 198283438 6877291 complement(1277741..1277914) 1 NC_011206.1 hypothetical protein 1277914 6877291 Lferr_1317 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219759.1 1277741 R 380394 CDS YP_002219760.1 198283439 6877292 1278182..1278766 1 NC_011206.1 KEGG: sil:SPO3110 TonB domain protein, putative; hypothetical protein 1278766 6877292 Lferr_1318 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219760.1 1278182 D 380394 CDS YP_002219761.1 198283440 6877293 1278831..1279646 1 NC_011206.1 KEGG: aau:AAur_0609 polysaccharide deacetylase family protein; hypothetical protein 1279646 6877293 Lferr_1319 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219761.1 1278831 D 380394 CDS YP_002219762.1 198283441 6877294 1279646..1281196 1 NC_011206.1 KEGG: bam:Bamb_1989 hypothetical protein; Type IV secretory pathway VirD2 pilin (relaxase)-like protein 1281196 6877294 Lferr_1320 Acidithiobacillus ferrooxidans ATCC 53993 Type IV secretory pathway VirD2 pilin (relaxase)-like protein YP_002219762.1 1279646 D 380394 CDS YP_002219763.1 198283442 6877295 1281213..1281374 1 NC_011206.1 hypothetical protein 1281374 6877295 Lferr_1321 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219763.1 1281213 D 380394 CDS YP_002219764.1 198283443 6877296 1282059..1282238 1 NC_011206.1 KEGG: gur:Gura_2403 hypothetical protein; hypothetical protein 1282238 6877296 Lferr_1322 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219764.1 1282059 D 380394 CDS YP_002219765.1 198283444 6877297 1282305..1283072 1 NC_011206.1 hypothetical protein 1283072 6877297 Lferr_1323 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219765.1 1282305 D 380394 CDS YP_002219766.1 198283445 6877299 complement(1283489..1283683) 1 NC_011206.1 hypothetical protein 1283683 6877299 Lferr_1325 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219766.1 1283489 R 380394 CDS YP_002219767.1 198283446 6877300 complement(1283728..1285365) 1 NC_011206.1 PFAM: transposase IS66; KEGG: bte:BTH_I1449 TnpC protein; transposase IS66 1285365 6877300 Lferr_1326 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS66 YP_002219767.1 1283728 R 380394 CDS YP_002219768.1 198283447 6877301 complement(1285415..1285762) 1 NC_011206.1 PFAM: IS66 Orf2 family protein; KEGG: bte:BTH_I2736 TnpB protein; IS66 Orf2 family protein 1285762 6877301 Lferr_1327 Acidithiobacillus ferrooxidans ATCC 53993 IS66 Orf2 family protein YP_002219768.1 1285415 R 380394 CDS YP_002219769.1 198283448 6877302 complement(1285753..1286085) 1 NC_011206.1 KEGG: eba:ebD46 hypothetical protein, possibly transposase fragment; transposase 1286085 6877302 Lferr_1328 Acidithiobacillus ferrooxidans ATCC 53993 transposase YP_002219769.1 1285753 R 380394 CDS YP_002219770.1 198283449 6877303 1286193..1286336 1 NC_011206.1 hypothetical protein 1286336 6877303 Lferr_1329 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219770.1 1286193 D 380394 CDS YP_002219771.1 198283450 6877304 1286353..1286460 1 NC_011206.1 hypothetical protein 1286460 6877304 Lferr_1330 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219771.1 1286353 D 380394 CDS YP_002219772.1 198283451 6877305 1286768..1286914 1 NC_011206.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: eba:ebA5850 hypothetical protein; addiction module killer protein 1286914 6877305 Lferr_1331 Acidithiobacillus ferrooxidans ATCC 53993 addiction module killer protein YP_002219772.1 1286768 D 380394 CDS YP_002219773.1 198283452 6877306 1286918..1287217 1 NC_011206.1 TIGRFAM: addiction module antidote protein; KEGG: pfo:Pfl_0420 predicted transcriptional regulator; transcriptional regulator 1287217 6877306 Lferr_1332 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002219773.1 1286918 D 380394 CDS YP_002219774.1 198283453 6877307 1287784..1288236 1 NC_011206.1 hypothetical protein 1288236 6877307 Lferr_1333 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219774.1 1287784 D 380394 CDS YP_002219775.1 198283454 6877308 1288233..1289201 1 NC_011206.1 TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: net:Neut_2555 type II secretion system protein E; P-type conjugative transfer ATPase TrbB 1289201 6877308 Lferr_1334 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer ATPase TrbB YP_002219775.1 1288233 D 380394 CDS YP_002219776.1 198283455 6877309 1289250..1289630 1 NC_011206.1 hypothetical protein 1289630 6877309 Lferr_1335 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219776.1 1289250 D 380394 CDS YP_002219777.1 198283456 6877310 complement(1289598..1290389) 1 NC_011206.1 hypothetical protein 1290389 6877310 Lferr_1336 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219777.1 1289598 R 380394 CDS YP_002219778.1 198283457 6877311 1290594..1290980 1 NC_011206.1 PFAM: Conjugal transfer protein TrbC; KEGG: bcs:BCAN_B0369 P-type conjugative transfer protein TrbL; conjugal transfer protein TrbC 1290980 6877311 Lferr_1337 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TrbC YP_002219778.1 1290594 D 380394 CDS YP_002219779.1 198283458 6877312 1290984..1291361 1 NC_011206.1 KEGG: pna:Pnap_2502 conjugal transfer TrbD family protein; hypothetical protein 1291361 6877312 Lferr_1338 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219779.1 1290984 D 380394 CDS YP_002219780.1 198283459 6877313 1291361..1293883 1 NC_011206.1 PFAM: CagE TrbE VirB component of type IV transporter system; SMART: AAA ATPase; KEGG: smd:Smed_5379 type IV secretion/conjugal transfer ATPase, VirB4 family; V transporter system protein CagE/TrbE/VirB 1293883 6877313 Lferr_1339 Acidithiobacillus ferrooxidans ATCC 53993 V transporter system protein CagE/TrbE/VirB YP_002219780.1 1291361 D 380394 CDS YP_002219781.1 198283460 6877314 1293880..1294134 1 NC_011206.1 hypothetical protein 1294134 6877314 Lferr_1340 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219781.1 1293880 D 380394 CDS YP_002219782.1 198283461 6877315 1294217..1294957 1 NC_011206.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bms:BRA0368 TrbJ protein; P-type conjugative transfer protein TrbJ 1294957 6877315 Lferr_1341 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer protein TrbJ YP_002219782.1 1294217 D 380394 CDS YP_002219783.1 198283462 6877316 1294969..1295223 1 NC_011206.1 hypothetical protein 1295223 6877316 Lferr_1342 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219783.1 1294969 D 380394 CDS YP_002219784.1 198283463 6877317 1295239..1297008 1 NC_011206.1 TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: aav:Aave_0395 TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 1297008 6877317 Lferr_1343 Acidithiobacillus ferrooxidans ATCC 53993 P-type conjugative transfer protein TrbL YP_002219784.1 1295239 D 380394 CDS YP_002219785.1 198283464 6877318 1297094..1297474 1 NC_011206.1 hypothetical protein 1297474 6877318 Lferr_1344 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219785.1 1297094 D 380394 CDS YP_002219786.1 198283465 6877319 complement(1297648..1298115) 1 NC_011206.1 KEGG: reu:Reut_C5911 hypothetical protein; hypothetical protein 1298115 6877319 Lferr_1345 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219786.1 1297648 R 380394 CDS YP_002219787.1 198283466 6877320 complement(1298504..1299988) 1 NC_011206.1 KEGG: mca:MCA1467 serine protease, MucD; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 1299988 6877320 Lferr_1346 Acidithiobacillus ferrooxidans ATCC 53993 protease Do YP_002219787.1 1298504 R 380394 CDS YP_002219788.1 198283467 6877321 complement(1300488..1300934) 1 NC_011206.1 PFAM: heat shock protein Hsp20; KEGG: noc:Noc_1573 heat shock protein HSP20; heat shock protein Hsp20 1300934 6877321 Lferr_1347 Acidithiobacillus ferrooxidans ATCC 53993 heat shock protein Hsp20 YP_002219788.1 1300488 R 380394 CDS YP_002219789.1 198283468 6877323 1302212..1303093 1 NC_011206.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mva:Mvan_5187 6-phosphogluconate dehydrogenase, NAD-binding; NAD-binding 6-phosphogluconate dehydrogenase 1303093 6877323 Lferr_1349 Acidithiobacillus ferrooxidans ATCC 53993 NAD-binding 6-phosphogluconate dehydrogenase YP_002219789.1 1302212 D 380394 CDS YP_002219790.1 198283469 6877324 1303123..1305390 1 NC_011206.1 KEGG: rso:RS02385 putative formate dehydrogenase oxidoreductase protein; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase molybdopterin subunit 1305390 6877324 Lferr_1350 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase molybdopterin subunit YP_002219790.1 1303123 D 380394 CDS YP_002219791.1 198283470 6877325 1305380..1305649 1 NC_011206.1 hypothetical protein 1305649 6877325 Lferr_1351 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219791.1 1305380 D 380394 CDS YP_002219792.1 198283471 6877326 1305628..1306476 1 NC_011206.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bbr:BB1320 formate dehydrogenase associated protein; formate dehydrogenase family accessory protein FdhD 1306476 6877326 Lferr_1352 Acidithiobacillus ferrooxidans ATCC 53993 formate dehydrogenase family accessory protein FdhD YP_002219792.1 1305628 D 380394 CDS YP_002219793.1 198283472 6877327 complement(1306485..1307324) 1 NC_011206.1 KEGG: bvi:Bcep1808_3204 helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 1307324 6877327 Lferr_1353 Acidithiobacillus ferrooxidans ATCC 53993 helix-turn-helix, type 11 domain-containing protein YP_002219793.1 1306485 R 380394 CDS YP_002219794.1 198283473 6877328 complement(1307435..1308517) 1 NC_011206.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bam:Bamb_4089 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1308517 6877328 Lferr_1354 Acidithiobacillus ferrooxidans ATCC 53993 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_002219794.1 1307435 R 380394 CDS YP_002219795.1 198283474 6877329 complement(1308522..1310195) 1 NC_011206.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1310195 6877329 Lferr_1355 Acidithiobacillus ferrooxidans ATCC 53993 hydroxylamine reductase YP_002219795.1 1308522 R 380394 CDS YP_002219796.1 198283475 6877330 1310566..1311234 1 NC_011206.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: tbd:Tbd_0079 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1311234 6877330 Lferr_1356 Acidithiobacillus ferrooxidans ATCC 53993 Crp/Fnr family transcriptional regulator YP_002219796.1 1310566 D 380394 CDS YP_002219797.1 198283476 6877331 complement(1311500..1312528) 1 NC_011206.1 KEGG: tbd:Tbd_2013 hypothetical protein; hypothetical protein 1312528 6877331 Lferr_1357 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219797.1 1311500 R 380394 CDS YP_002219798.1 198283477 6877332 complement(1312655..1315132) 1 NC_011206.1 KEGG: rca:Rcas_0567 hypothetical protein; hypothetical protein 1315132 6877332 Lferr_1358 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219798.1 1312655 R 380394 CDS YP_002219799.1 198283478 6877333 complement(1315135..1316775) 1 NC_011206.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bbt:BBta_2651 putative NADH dehydrogenase; NADH-ubiquinone/plastoquinone (complex I) oxidoreductase 1316775 6877333 Lferr_1359 Acidithiobacillus ferrooxidans ATCC 53993 NADH-ubiquinone/plastoquinone (complex I) oxidoreductase YP_002219799.1 1315135 R 380394 CDS YP_002219800.1 198283479 6877334 complement(1317080..1318330) 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ppw:PputW619_2304 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 1318330 6877334 Lferr_1360 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219800.1 1317080 R 380394 CDS YP_002219801.1 198283480 6877335 complement(1318340..1319452) 1 NC_011206.1 PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_0844 glycolate oxidase FAD binding subunit; glycolate oxidase FAD-binding subunit 1319452 glcE 6877335 glcE Acidithiobacillus ferrooxidans ATCC 53993 glycolate oxidase FAD-binding subunit YP_002219801.1 1318340 R 380394 CDS YP_002219802.1 198283481 6877336 complement(1319406..1320872) 1 NC_011206.1 PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_0495 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 1320872 6877336 Lferr_1362 Acidithiobacillus ferrooxidans ATCC 53993 D-lactate dehydrogenase YP_002219802.1 1319406 R 380394 CDS YP_002219803.1 198283482 6877337 complement(1320887..1322224) 1 NC_011206.1 KEGG: ava:Ava_3476 hypothetical protein; hypothetical protein 1322224 6877337 Lferr_1363 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219803.1 1320887 R 380394 CDS YP_002219804.1 198283483 6877338 complement(1322237..1324456) 1 NC_011206.1 PFAM: Transketolase central region; KEGG: tel:tll1846 hypothetical protein; transketolase central region 1324456 6877338 Lferr_1364 Acidithiobacillus ferrooxidans ATCC 53993 transketolase central region YP_002219804.1 1322237 R 380394 CDS YP_002219805.1 198283484 6877339 1324554..1325333 1 NC_011206.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: cps:CPS_4891 transcriptional regulator, IclR family; IclR family transcriptional regulator 1325333 6877339 Lferr_1365 Acidithiobacillus ferrooxidans ATCC 53993 IclR family transcriptional regulator YP_002219805.1 1324554 D 380394 CDS YP_002219806.1 198283485 6877340 1325633..1325902 1 NC_011206.1 hypothetical protein 1325902 6877340 Lferr_1366 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219806.1 1325633 D 380394 CDS YP_002219807.1 198283486 6877341 1325969..1326847 1 NC_011206.1 KEGG: pnu:Pnuc_2057 hypothetical protein; hypothetical protein 1326847 6877341 Lferr_1367 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219807.1 1325969 D 380394 CDS YP_002219808.1 198283487 6877342 1326903..1327463 1 NC_011206.1 hypothetical protein 1327463 6877342 Lferr_1368 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219808.1 1326903 D 380394 CDS YP_002219809.1 198283488 6877343 1327531..1328568 1 NC_011206.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1328568 6877343 Lferr_1369 Acidithiobacillus ferrooxidans ATCC 53993 dihydroorotase YP_002219809.1 1327531 D 380394 CDS YP_002219810.1 198283489 6877344 1328650..1330323 1 NC_011206.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1330323 6877344 Lferr_1370 Acidithiobacillus ferrooxidans ATCC 53993 dihydroxy-acid dehydratase YP_002219810.1 1328650 D 380394 CDS YP_002219811.1 198283490 6877345 complement(1330327..1331313) 1 NC_011206.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: eba:ebA110 putative translation factor (SUA5); Sua5/YciO/YrdC/YwlC family protein 1331313 6877345 Lferr_1371 Acidithiobacillus ferrooxidans ATCC 53993 Sua5/YciO/YrdC/YwlC family protein YP_002219811.1 1330327 R 380394 CDS YP_002219812.1 198283491 6877346 complement(1331317..1331511) 1 NC_011206.1 hypothetical protein 1331511 6877346 Lferr_1372 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219812.1 1331317 R 380394 CDS YP_002219813.1 198283492 6877347 complement(1331508..1332296) 1 NC_011206.1 TIGRFAM: dethiobiotin synthase; KEGG: ade:Adeh_0070 dethiobiotin synthase; dethiobiotin synthase 1332296 6877347 Lferr_1373 Acidithiobacillus ferrooxidans ATCC 53993 dethiobiotin synthase YP_002219813.1 1331508 R 380394 CDS YP_002219814.1 198283493 6877348 complement(1332293..1333474) 1 NC_011206.1 PFAM: ketose-bisphosphate aldolase class-II; KEGG: bbt:BBta_0455 putative fructose 1,6-bisphosphate aldolase; ketose-bisphosphate aldolase class-II 1333474 6877348 Lferr_1374 Acidithiobacillus ferrooxidans ATCC 53993 ketose-bisphosphate aldolase class-II YP_002219814.1 1332293 R 380394 CDS YP_002219815.1 198283494 6877349 complement(1333600..1335951) 1 NC_011206.1 PFAM: von Willebrand factor type A; KEGG: tbd:Tbd_2621 rubisco activation protein CbbO; hypothetical protein 1335951 6877349 Lferr_1375 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219815.1 1333600 R 380394 CDS YP_002219816.1 198283495 6877350 complement(1335967..1336770) 1 NC_011206.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: neu:NE1919 nitric oxide reductase NorQ protein; CbbQ/NirQ/NorQ domain-containing protein 1336770 6877350 Lferr_1376 Acidithiobacillus ferrooxidans ATCC 53993 CbbQ/NirQ/NorQ domain-containing protein YP_002219816.1 1335967 R 380394 CDS YP_002219817.1 198283496 6877351 complement(1336801..1337055) 1 NC_011206.1 hypothetical protein 1337055 6877351 Lferr_1377 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219817.1 1336801 R 380394 CDS YP_002219818.1 198283497 6877352 complement(1337046..1337681) 1 NC_011206.1 ParA family protein 1337681 6877352 Lferr_1378 Acidithiobacillus ferrooxidans ATCC 53993 ParA family protein YP_002219818.1 1337046 R 380394 CDS YP_002219819.1 198283498 6877353 complement(1337718..1337996) 1 NC_011206.1 KEGG: tbd:Tbd_2642 hypothetical protein; hypothetical protein 1337996 6877353 Lferr_1379 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219819.1 1337718 R 380394 CDS YP_002219820.1 198283499 6877354 complement(1337993..1338418) 1 NC_011206.1 PFAM: Ferritin Dps family protein; KEGG: tbd:Tbd_2643 bacterioferritin; ferritin Dps family protein 1338418 6877354 Lferr_1380 Acidithiobacillus ferrooxidans ATCC 53993 ferritin Dps family protein YP_002219820.1 1337993 R 380394 CDS YP_002219821.1 198283500 6877355 complement(1338450..1338788) 1 NC_011206.1 PFAM: microcompartments protein; KEGG: net:Neut_0811 microcompartments protein; microcompartments protein 1338788 6877355 Lferr_1381 Acidithiobacillus ferrooxidans ATCC 53993 microcompartments protein YP_002219821.1 1338450 R 380394 CDS YP_002219822.1 198283501 6877356 complement(1338834..1339130) 1 NC_011206.1 PFAM: microcompartments protein; KEGG: net:Neut_0811 microcompartments protein; microcompartments protein 1339130 6877356 Lferr_1382 Acidithiobacillus ferrooxidans ATCC 53993 microcompartments protein YP_002219822.1 1338834 R 380394 CDS YP_002219823.1 198283502 6877357 complement(1339175..1339471) 1 NC_011206.1 PFAM: microcompartments protein; KEGG: net:Neut_0811 microcompartments protein; microcompartments protein 1339471 6877357 Lferr_1383 Acidithiobacillus ferrooxidans ATCC 53993 microcompartments protein YP_002219823.1 1339175 R 380394 CDS YP_002219824.1 198283503 6877358 complement(1339503..1339769) 1 NC_011206.1 TIGRFAM: carboxysome peptide B; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: tbd:Tbd_2647 Carboxysome protein B; carboxysome peptide B 1339769 6877358 Lferr_1384 Acidithiobacillus ferrooxidans ATCC 53993 carboxysome peptide B YP_002219824.1 1339503 R 380394 CDS YP_002219825.1 198283504 6877359 complement(1339780..1340028) 1 NC_011206.1 TIGRFAM: carboxysome peptide A; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: tbd:Tbd_2648 carboxysome protein A; carboxysome peptide A 1340028 6877359 Lferr_1385 Acidithiobacillus ferrooxidans ATCC 53993 carboxysome peptide A YP_002219825.1 1339780 R 380394 CDS YP_002219826.1 198283505 6877360 complement(1340025..1341626) 1 NC_011206.1 TIGRFAM: carboxysome shell carbonic anhydrase; PFAM: Carboxysome shell carbonic anhydrase; KEGG: tbd:Tbd_2649 carboxysome shell protein CsoS3, carbonic anhydrase epsilon; carboxysome shell carbonic anhydrase 1341626 6877360 Lferr_1386 Acidithiobacillus ferrooxidans ATCC 53993 carboxysome shell carbonic anhydrase YP_002219826.1 1340025 R 380394 CDS YP_002219827.1 198283506 6877361 complement(1341682..1343982) 1 NC_011206.1 KEGG: tbd:Tbd_2650 carboxysome structural protein CsoS2; carboxysome structural protein CsoS2 1343982 6877361 Lferr_1387 Acidithiobacillus ferrooxidans ATCC 53993 carboxysome structural protein CsoS2 YP_002219827.1 1341682 R 380394 CDS YP_002219828.1 198283507 6877362 complement(1344053..1344385) 1 NC_011206.1 PFAM: ribulose bisphosphate carboxylase small chain; KEGG: mca:MCA2744 ribulose bisphosphate carboxylase, small subunit; ribulose-bisphosphate carboxylase 1344385 6877362 Lferr_1388 Acidithiobacillus ferrooxidans ATCC 53993 ribulose-bisphosphate carboxylase YP_002219828.1 1344053 R 380394 CDS YP_002219829.1 198283508 6877363 complement(1344477..1345898) 1 NC_011206.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1345898 rbcL 6877363 rbcL Acidithiobacillus ferrooxidans ATCC 53993 ribulose bisophosphate carboxylase YP_002219829.1 1344477 R 380394 CDS YP_002219830.1 198283509 6877364 1346043..1346969 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1502 transcriptional regulator, LysR family; LysR family transcriptional regulator 1346969 6877364 Lferr_1390 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002219830.1 1346043 D 380394 CDS YP_002219831.1 198283510 6877365 1347413..1348270 1 NC_011206.1 KEGG: scl:sce5771 hypothetical protein; hypothetical protein 1348270 6877365 Lferr_1391 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219831.1 1347413 D 380394 CDS YP_002219832.1 198283511 6877366 1348580..1349248 1 NC_011206.1 KEGG: net:Neut_2549 conjugal transfer protein; conjugal transfer protein 1349248 6877366 Lferr_1392 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein YP_002219832.1 1348580 D 380394 CDS YP_002219833.1 198283512 6877367 1349261..1350376 1 NC_011206.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pna:Pnap_2510 conjugal transfer protein TrbG/VirB9/CagX; conjugal transfer protein TrbG/VirB9/CagX 1350376 6877367 Lferr_1393 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TrbG/VirB9/CagX YP_002219833.1 1349261 D 380394 CDS YP_002219834.1 198283513 6877368 1350378..1351394 1 NC_011206.1 KEGG: cak:Caul_2034 P-type conjugative transfer protein TrbG; hypothetical protein 1351394 6877368 Lferr_1394 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219834.1 1350378 D 380394 CDS YP_002219835.1 198283514 6877369 1351397..1352857 1 NC_011206.1 PFAM: conjugation TrbI family protein; KEGG: ret:RHE_PA00169 conjugal transfer protein I; conjugation TrbI family protein 1352857 6877369 Lferr_1395 Acidithiobacillus ferrooxidans ATCC 53993 conjugation TrbI family protein YP_002219835.1 1351397 D 380394 CDS YP_002219836.1 198283515 6877370 1352868..1353170 1 NC_011206.1 hypothetical protein 1353170 6877370 Lferr_1396 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219836.1 1352868 D 380394 CDS YP_002219837.1 198283516 6877371 1353167..1353823 1 NC_011206.1 PFAM: Lytic transglycosylase catalytic; KEGG: acr:Acry_3520 lytic transglycosylase, catalytic; Lytic transglycosylase 1353823 6877371 Lferr_1397 Acidithiobacillus ferrooxidans ATCC 53993 Lytic transglycosylase YP_002219837.1 1353167 D 380394 CDS YP_002219838.1 198283517 6877372 1353834..1356320 1 NC_011206.1 PFAM: TRAG family protein; KEGG: eba:p2B19 conjugal transfer protein TraG; TRAG family protein 1356320 6877372 Lferr_1398 Acidithiobacillus ferrooxidans ATCC 53993 TRAG family protein YP_002219838.1 1353834 D 380394 CDS YP_002219839.1 198283518 6877373 1356430..1356624 1 NC_011206.1 KEGG: ecs:ECs1068 hypothetical protein; hypothetical protein 1356624 6877373 Lferr_1399 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219839.1 1356430 D 380394 CDS YP_002219840.1 198283519 6877374 1356626..1356832 1 NC_011206.1 KEGG: ecs:ECs1067 hypothetical protein; hypothetical protein 1356832 6877374 Lferr_1400 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219840.1 1356626 D 380394 CDS YP_002219841.1 198283520 6877375 1357765..1358259 1 NC_011206.1 KEGG: nve:NEMVE_v1g245607 predicted protein; hypothetical protein 1358259 6877375 Lferr_1401 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219841.1 1357765 D 380394 CDS YP_002219842.1 198283521 6877376 1358260..1358418 1 NC_011206.1 hypothetical protein 1358418 6877376 Lferr_1402 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219842.1 1358260 D 380394 CDS YP_002219843.1 198283522 6877378 complement(1362059..1362835) 1 NC_011206.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 1362835 6877378 Lferr_1404 Acidithiobacillus ferrooxidans ATCC 53993 type IV pilus assembly PilZ YP_002219843.1 1362059 R 380394 CDS YP_002219844.1 198283523 6877379 complement(1362940..1365579) 1 NC_011206.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: dar:Daro_3990 PAS:GGDEF; diguanylate cyclase/phosphodiesterase 1365579 6877379 Lferr_1405 Acidithiobacillus ferrooxidans ATCC 53993 diguanylate cyclase/phosphodiesterase YP_002219844.1 1362940 R 380394 CDS YP_002219845.1 198283524 6877380 complement(1366004..1366192) 1 NC_011206.1 hypothetical protein 1366192 6877380 Lferr_1406 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219845.1 1366004 R 380394 CDS YP_002219846.1 198283525 6877381 complement(1366189..1366422) 1 NC_011206.1 KEGG: bvi:Bcep1808_2162 hypothetical protein; hypothetical protein 1366422 6877381 Lferr_1407 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219846.1 1366189 R 380394 CDS YP_002219847.1 198283526 6877382 complement(1366430..1367329) 1 NC_011206.1 KEGG: pto:PTO0992 hypothetical cardiolipin synthase; cardiolipin synthase 1367329 6877382 Lferr_1408 Acidithiobacillus ferrooxidans ATCC 53993 cardiolipin synthase YP_002219847.1 1366430 R 380394 CDS YP_002219848.1 198283527 6877383 complement(1367657..1367914) 1 NC_011206.1 hypothetical protein 1367914 6877383 Lferr_1409 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219848.1 1367657 R 380394 CDS YP_002219849.1 198283528 6877384 complement(1367998..1369236) 1 NC_011206.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sth:STH3332 ParBc, ParB-like nuclease domain; parB-like partition protein 1369236 6877384 Lferr_1410 Acidithiobacillus ferrooxidans ATCC 53993 parB-like partition protein YP_002219849.1 1367998 R 380394 CDS YP_002219850.1 198283529 6877385 complement(1369238..1370008) 1 NC_011206.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xfa:XFa0060 plasmid replication protein; cobyrinic acid ac-diamide synthase 1370008 6877385 Lferr_1411 Acidithiobacillus ferrooxidans ATCC 53993 cobyrinic acid ac-diamide synthase YP_002219850.1 1369238 R 380394 CDS YP_002219851.1 198283530 6877386 complement(1369987..1370427) 1 NC_011206.1 hypothetical protein 1370427 6877386 Lferr_1412 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219851.1 1369987 R 380394 CDS YP_002219852.1 198283531 6877387 1370557..1370925 1 NC_011206.1 KEGG: dps:DP0200 hypothetical protein; hypothetical protein 1370925 6877387 Lferr_1413 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219852.1 1370557 D 380394 CDS YP_002219853.1 198283532 6877388 complement(1370936..1371934) 1 NC_011206.1 PFAM: aldo/keto reductase; KEGG: pap:PSPA7_4242 probable oxidoreductase; aldo/keto reductase 1371934 6877388 Lferr_1414 Acidithiobacillus ferrooxidans ATCC 53993 aldo/keto reductase YP_002219853.1 1370936 R 380394 CDS YP_002219854.1 198283533 6877389 1372189..1375326 1 NC_011206.1 KEGG: dar:Daro_3990 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1375326 6877389 Lferr_1415 Acidithiobacillus ferrooxidans ATCC 53993 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_002219854.1 1372189 D 380394 CDS YP_002219855.1 198283534 6877390 complement(1375453..1375998) 1 NC_011206.1 KEGG: mes:Meso_0519 conjugal transfer protein precursor; conjugal transfer protein 1375998 6877390 Lferr_1416 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein YP_002219855.1 1375453 R 380394 CDS YP_002219856.1 198283535 6877391 1376021..1376410 1 NC_011206.1 KEGG: pla:Plav_2045 hypothetical protein; hypothetical protein 1376410 6877391 Lferr_1417 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219856.1 1376021 D 380394 CDS YP_002219857.1 198283536 6877392 1376391..1376732 1 NC_011206.1 KEGG: mar:MAE_16400 hypothetical protein; hypothetical protein 1376732 6877392 Lferr_1418 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219857.1 1376391 D 380394 CDS YP_002219858.1 198283537 6877393 complement(1376740..1376952) 1 NC_011206.1 hypothetical protein 1376952 6877393 Lferr_1419 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219858.1 1376740 R 380394 CDS YP_002219859.1 198283538 6877394 complement(1376915..1377208) 1 NC_011206.1 hypothetical protein 1377208 6877394 Lferr_1420 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219859.1 1376915 R 380394 CDS YP_002219860.1 198283539 6877395 complement(1377257..1378567) 1 NC_011206.1 PFAM: TraB family protein; KEGG: nha:Nham_4542 TraB; conjugal transfer protein TraB 1378567 6877395 Lferr_1421 Acidithiobacillus ferrooxidans ATCC 53993 conjugal transfer protein TraB YP_002219860.1 1377257 R 380394 CDS YP_002219861.1 198283540 6877396 1378844..1379056 1 NC_011206.1 hypothetical protein 1379056 6877396 Lferr_1422 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219861.1 1378844 D 380394 CDS YP_002219862.1 198283541 6877397 1379068..1379511 1 NC_011206.1 PFAM: protein of unknown function UPF0150; KEGG: reh:H16_B2375 hypothetical protein; hypothetical protein 1379511 6877397 Lferr_1423 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219862.1 1379068 D 380394 CDS YP_002219863.1 198283542 6877398 1379617..1379913 1 NC_011206.1 TIGRFAM: addiction module antidote protein; KEGG: rru:Rru_A0456 predicted transcriptional regulator; transcriptional regulator 1379913 6877398 Lferr_1424 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002219863.1 1379617 D 380394 CDS YP_002219864.1 198283543 6877399 complement(1380612..1382663) 1 NC_011206.1 KEGG: eba:p2B17 TraE protein (DNA topoisomerase); TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase III 1382663 6877399 Lferr_1425 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase III YP_002219864.1 1380612 R 380394 CDS YP_002219865.1 198283544 6877400 complement(1382782..1383696) 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: bmu:Bmul_5725 integrase catalytic region; integrase catalytic subunit 1383696 6877400 Lferr_1426 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002219865.1 1382782 R 380394 CDS YP_002219866.1 198283545 6877401 complement(1383693..1384022) 1 NC_011206.1 PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_3905 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1384022 6877401 Lferr_1427 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS3/IS911 family protein YP_002219866.1 1383693 R 380394 CDS YP_002219867.1 198283546 6877402 1384274..1384912 1 NC_011206.1 KEGG: hau:Haur_4474 HNH endonuclease; restriction endonuclease-like protein 1384912 6877402 Lferr_1428 Acidithiobacillus ferrooxidans ATCC 53993 restriction endonuclease-like protein YP_002219867.1 1384274 D 380394 CDS YP_002219868.1 198283547 6877403 1385042..1385458 1 NC_011206.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: net:Neut_0144 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1385458 6877403 Lferr_1429 Acidithiobacillus ferrooxidans ATCC 53993 glutathione-dependent formaldehyde-activating protein YP_002219868.1 1385042 D 380394 CDS YP_002219869.1 198283548 6877404 1385570..1386853 1 NC_011206.1 KEGG: fjo:Fjoh_3606 hypothetical protein; hypothetical protein 1386853 6877404 Lferr_1430 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219869.1 1385570 D 380394 CDS YP_002219870.1 198283549 6877405 1387326..1387910 1 NC_011206.1 PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase; carbonic anhydrase 1387910 6877405 Lferr_1431 Acidithiobacillus ferrooxidans ATCC 53993 carbonic anhydrase YP_002219870.1 1387326 D 380394 CDS YP_002219871.1 198283550 6877406 1388245..1389369 1 NC_011206.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: aeh:Mlg_2775 DNA-directed DNA polymerase; DNA-directed DNA polymerase 1389369 6877406 Lferr_1432 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed DNA polymerase YP_002219871.1 1388245 D 380394 CDS YP_002219872.1 198283551 6877408 complement(1390424..1391761) 1 NC_011206.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: tbd:Tbd_2243 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 1391761 6877408 Lferr_1434 Acidithiobacillus ferrooxidans ATCC 53993 phospholipase D/transphosphatidylase YP_002219872.1 1390424 R 380394 CDS YP_002219873.1 198283552 6877409 1391892..1392065 1 NC_011206.1 hypothetical protein 1392065 6877409 Lferr_1435 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219873.1 1391892 D 380394 CDS YP_002219874.1 198283553 6877410 1392052..1392582 1 NC_011206.1 hypothetical protein 1392582 6877410 Lferr_1436 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219874.1 1392052 D 380394 CDS YP_002219875.1 198283554 6877411 complement(1393083..1395695) 1 NC_011206.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: pap:PSPA7_1519 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 1395695 6877411 Lferr_1437 Acidithiobacillus ferrooxidans ATCC 53993 DNA mismatch repair protein MutS YP_002219875.1 1393083 R 380394 CDS YP_002219876.1 198283555 6877412 complement(1395720..1395956) 1 NC_011206.1 KEGG: dar:Daro_0859 hypothetical protein; hypothetical protein 1395956 6877412 Lferr_1438 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219876.1 1395720 R 380394 CDS YP_002219877.1 198283556 6877413 1396088..1396264 1 NC_011206.1 KEGG: stp:Strop_0409 protein of unknown function DUF520; hypothetical protein 1396264 6877413 Lferr_1439 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219877.1 1396088 D 380394 CDS YP_002219878.1 198283557 6877414 1396280..1397524 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: mca:MCA2126 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1397524 6877414 Lferr_1440 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002219878.1 1396280 D 380394 CDS YP_002219879.1 198283558 6877415 complement(1397756..1398448) 1 NC_011206.1 PFAM: protein of unknown function UPF0005; KEGG: mpt:Mpe_A1726 hypothetical protein; hypothetical protein 1398448 6877415 Lferr_1441 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219879.1 1397756 R 380394 CDS YP_002219880.1 198283559 6877416 1398677..1399339 1 NC_011206.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: pnu:Pnuc_0699 exonuclease, RNase T and DNA polymerase III; Exonuclease RNase T and DNA polymerase III 1399339 6877416 Lferr_1442 Acidithiobacillus ferrooxidans ATCC 53993 Exonuclease RNase T and DNA polymerase III YP_002219880.1 1398677 D 380394 CDS YP_002219881.1 198283560 6877417 complement(1399312..1399938) 1 NC_011206.1 KEGG: mca:MCA0526 hypothetical protein; hypothetical protein 1399938 6877417 Lferr_1443 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219881.1 1399312 R 380394 CDS YP_002219882.1 198283561 6877418 complement(1399935..1400336) 1 NC_011206.1 PFAM: Smr protein/MutS2; KEGG: gme:Gmet_1296 Smr protein/MutS2-like; Smr protein/MutS2 1400336 6877418 Lferr_1444 Acidithiobacillus ferrooxidans ATCC 53993 Smr protein/MutS2 YP_002219882.1 1399935 R 380394 CDS YP_002219883.1 198283562 6877419 complement(1400383..1404216) 1 NC_011206.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: aeh:Mlg_1638 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 1404216 6877419 Lferr_1445 Acidithiobacillus ferrooxidans ATCC 53993 FAD linked oxidase domain-containing protein YP_002219883.1 1400383 R 380394 CDS YP_002219884.1 198283563 6877420 complement(1404216..1405052) 1 NC_011206.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1405052 panC 6877420 panC Acidithiobacillus ferrooxidans ATCC 53993 pantoate--beta-alanine ligase YP_002219884.1 1404216 R 380394 CDS YP_002219885.1 198283564 6877421 complement(1405054..1405839) 1 NC_011206.1 KEGG: acr:Acry_0665 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1405839 6877421 Lferr_1447 Acidithiobacillus ferrooxidans ATCC 53993 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002219885.1 1405054 R 380394 CDS YP_002219886.1 198283565 6877422 complement(1405832..1406443) 1 NC_011206.1 KEGG: abo:ABO_0338 deoxynucleoside kinase; deoxynucleoside kinase 1406443 6877422 Lferr_1448 Acidithiobacillus ferrooxidans ATCC 53993 deoxynucleoside kinase YP_002219886.1 1405832 R 380394 CDS YP_002219887.1 198283566 6877423 complement(1406440..1406970) 1 NC_011206.1 KEGG: dar:Daro_3183 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1406970 6877423 Lferr_1449 Acidithiobacillus ferrooxidans ATCC 53993 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002219887.1 1406440 R 380394 CDS YP_002219888.1 198283567 6877424 complement(1406967..1408319) 1 NC_011206.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: ppd:Ppro_3306 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1408319 6877424 Lferr_1450 Acidithiobacillus ferrooxidans ATCC 53993 polynucleotide adenylyltransferase YP_002219888.1 1406967 R 380394 CDS YP_002219889.1 198283568 6877425 complement(1408341..1409834) 1 NC_011206.1 KEGG: csa:Csal_3063 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 1409834 6877425 Lferr_1451 Acidithiobacillus ferrooxidans ATCC 53993 poly(A) polymerase YP_002219889.1 1408341 R 380394 CDS YP_002219890.1 198283569 6877426 complement(1409969..1410973) 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: acr:Acry_0724 glycosyl transferase, family 2; family 2 glycosyl transferase 1410973 6877426 Lferr_1452 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002219890.1 1409969 R 380394 CDS YP_002219891.1 198283570 6877427 1411112..1412572 1 NC_011206.1 KEGG: tbd:Tbd_1752 IMP dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 1412572 6877427 Lferr_1453 Acidithiobacillus ferrooxidans ATCC 53993 inosine-5'-monophosphate dehydrogenase YP_002219891.1 1411112 D 380394 CDS YP_002219892.1 198283571 6877428 1412576..1414120 1 NC_011206.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; KEGG: sfu:Sfum_2123 GMP synthase, large subunit; GMP synthase 1414120 6877428 Lferr_1454 Acidithiobacillus ferrooxidans ATCC 53993 GMP synthase YP_002219892.1 1412576 D 380394 CDS YP_002219893.1 198283572 6877429 1414294..1414548 1 NC_011206.1 KEGG: smd:Smed_5670 plasmid stability protein-like protein; plasmid stability protein-like protein 1414548 6877429 Lferr_1455 Acidithiobacillus ferrooxidans ATCC 53993 plasmid stability protein-like protein YP_002219893.1 1414294 D 380394 CDS YP_002219894.1 198283573 6877430 1414549..1414968 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: pna:Pnap_4764 PilT protein domain protein; PilT protein domain-containing protein 1414968 6877430 Lferr_1456 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002219894.1 1414549 D 380394 CDS YP_002219895.1 198283574 6877431 1414986..1415198 1 NC_011206.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: rca:Rcas_2861 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 1415198 6877431 Lferr_1457 Acidithiobacillus ferrooxidans ATCC 53993 AbrB family transcriptional regulator YP_002219895.1 1414986 D 380394 CDS YP_002219896.1 198283575 6877432 1415198..1415353 1 NC_011206.1 hypothetical protein 1415353 6877432 Lferr_1458 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219896.1 1415198 D 380394 CDS YP_002219897.1 198283576 6877433 1416033..1417652 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C6568 putative amino acid transporter; amino acid permease-associated protein 1417652 6877433 Lferr_1459 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002219897.1 1416033 D 380394 CDS YP_002219898.1 198283577 6877434 1417743..1418942 1 NC_011206.1 KEGG: psa:PST_0959 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; glutamate 5-kinase 1418942 6877434 Lferr_1460 Acidithiobacillus ferrooxidans ATCC 53993 glutamate 5-kinase YP_002219898.1 1417743 D 380394 CDS YP_002219899.1 198283578 6877435 complement(1419018..1421375) 1 NC_011206.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cbd:COXBU7E912_0384 transporter, small conductance mechanosensitive ion channel (MscS) family protein; mechanosensitive ion channel protein MscS 1421375 6877435 Lferr_1461 Acidithiobacillus ferrooxidans ATCC 53993 mechanosensitive ion channel protein MscS YP_002219899.1 1419018 R 380394 CDS YP_002219900.1 198283579 6877436 1421747..1422025 1 NC_011206.1 hypothetical protein 1422025 6877436 Lferr_1462 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219900.1 1421747 D 380394 CDS YP_002219901.1 198283580 6877437 complement(1422052..1422876) 1 NC_011206.1 KEGG: reh:H16_A2063 hypothetical protein; hypothetical protein 1422876 6877437 Lferr_1463 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219901.1 1422052 R 380394 CDS YP_002219902.1 198283581 6877438 1423015..1423650 1 NC_011206.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: pfo:Pfl_1488 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 1423650 6877438 Lferr_1464 Acidithiobacillus ferrooxidans ATCC 53993 Sua5/YciO/YrdC/YwlC family protein YP_002219902.1 1423015 D 380394 CDS YP_002219903.1 198283582 6877439 1423701..1424360 1 NC_011206.1 PFAM: peptidase M50; KEGG: noc:Noc_1037 peptidase M50; peptidase M50 1424360 6877439 Lferr_1465 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M50 YP_002219903.1 1423701 D 380394 CDS YP_002219904.1 198283583 6877440 1424360..1425571 1 NC_011206.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1425571 6877440 Lferr_1466 Acidithiobacillus ferrooxidans ATCC 53993 tryptophanyl-tRNA synthetase YP_002219904.1 1424360 D 380394 CDS YP_002219905.1 198283584 6877441 1425552..1426373 1 NC_011206.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: aeh:Mlg_0721 condensin subunit ScpA; chromosome segregation and condensation protein ScpA 1426373 6877441 Lferr_1467 Acidithiobacillus ferrooxidans ATCC 53993 chromosome segregation and condensation protein ScpA YP_002219905.1 1425552 D 380394 CDS YP_002219906.1 198283585 6877442 1426373..1426906 1 NC_011206.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: psa:PST_2445 predicted transcriptional regulator; segregation and condensation protein B 1426906 6877442 Lferr_1468 Acidithiobacillus ferrooxidans ATCC 53993 segregation and condensation protein B YP_002219906.1 1426373 D 380394 CDS YP_002219907.1 198283586 6877443 1427069..1428373 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_2831 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1428373 6877443 Lferr_1469 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002219907.1 1427069 D 380394 CDS YP_002219908.1 198283587 6877444 1428497..1429375 1 NC_011206.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: slo:Shew_2246 pseudouridine synthase; RNA-binding S4 domain-containing protein 1429375 6877444 Lferr_1470 Acidithiobacillus ferrooxidans ATCC 53993 RNA-binding S4 domain-containing protein YP_002219908.1 1428497 D 380394 CDS YP_002219909.1 198283588 6877445 1429385..1430056 1 NC_011206.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: aeh:Mlg_0904 HhH-GPD family protein; HhH-GPD family protein 1430056 6877445 Lferr_1471 Acidithiobacillus ferrooxidans ATCC 53993 HhH-GPD family protein YP_002219909.1 1429385 D 380394 CDS YP_002219910.1 198283589 6877446 complement(1430093..1430353) 1 NC_011206.1 PFAM: Transglycosylase-associated protein; KEGG: hne:HNE_0591 hypothetical protein; transglycosylase-associated protein 1430353 6877446 Lferr_1472 Acidithiobacillus ferrooxidans ATCC 53993 transglycosylase-associated protein YP_002219910.1 1430093 R 380394 CDS YP_002219911.1 198283590 6877447 complement(1430360..1430632) 1 NC_011206.1 hypothetical protein 1430632 6877447 Lferr_1473 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219911.1 1430360 R 380394 CDS YP_002219912.1 198283591 6877448 complement(1430640..1432172) 1 NC_011206.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spl:Spea_2190 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 1432172 6877448 Lferr_1474 Acidithiobacillus ferrooxidans ATCC 53993 EmrB/QacA subfamily drug resistance transporter YP_002219912.1 1430640 R 380394 CDS YP_002219913.1 198283592 6877449 complement(1432175..1432732) 1 NC_011206.1 KEGG: nis:NIS_0014 hypothetical protein; hypothetical protein 1432732 6877449 Lferr_1475 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219913.1 1432175 R 380394 CDS YP_002219914.1 198283593 6877450 complement(1432745..1435270) 1 NC_011206.1 KEGG: sat:SYN_02761 glycogen phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase 1435270 6877450 Lferr_1476 Acidithiobacillus ferrooxidans ATCC 53993 alpha-glucan phosphorylase YP_002219914.1 1432745 R 380394 CDS YP_002219915.1 198283594 6877452 complement(1435689..1437116) 1 NC_011206.1 KEGG: sfu:Sfum_1475 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 1437116 6877452 Lferr_1478 Acidithiobacillus ferrooxidans ATCC 53993 pyruvate kinase YP_002219915.1 1435689 R 380394 CDS YP_002219916.1 198283595 6877453 complement(1437113..1438033) 1 NC_011206.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mem:Memar_1367 aldolase; aldolase 1438033 6877453 Lferr_1479 Acidithiobacillus ferrooxidans ATCC 53993 aldolase YP_002219916.1 1437113 R 380394 CDS YP_002219917.1 198283596 6877454 complement(1438026..1439423) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mta:Moth_1431 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1439423 6877454 Lferr_1480 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002219917.1 1438026 R 380394 CDS YP_002219918.1 198283597 6877455 1439936..1440385 1 NC_011206.1 KEGG: azc:AZC_0512 putative sel1-like repeat protein; hypothetical protein 1440385 6877455 Lferr_1481 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219918.1 1439936 D 380394 CDS YP_002219919.1 198283598 6877456 complement(1440511..1441470) 1 NC_011206.1 KEGG: cac:CAC0232 1-phosphofructokinase (fructoso 1-phosphate kinase); TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 1441470 6877456 Lferr_1482 Acidithiobacillus ferrooxidans ATCC 53993 1-phosphofructokinase YP_002219919.1 1440511 R 380394 CDS YP_002219920.1 198283599 6877457 complement(1441467..1442390) 1 NC_011206.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: pna:Pnap_3568 phosphate butyryltransferase; phosphate butyryltransferase 1442390 6877457 Lferr_1483 Acidithiobacillus ferrooxidans ATCC 53993 phosphate butyryltransferase YP_002219920.1 1441467 R 380394 CDS YP_002219921.1 198283600 6877458 complement(1442415..1443839) 1 NC_011206.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mhu:Mhun_1633 general substrate transporter; major facilitator superfamily protein 1443839 6877458 Lferr_1484 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219921.1 1442415 R 380394 CDS YP_002219922.1 198283601 6877461 complement(1445223..1446542) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1446542 6877461 Lferr_1487 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219922.1 1445223 R 380394 CDS YP_002219923.1 198283602 6877462 complement(1447153..1448421) 1 NC_011206.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: noc:Noc_2109 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzyme; hypothetical protein 1448421 6877462 Lferr_1488 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219923.1 1447153 R 380394 CDS YP_002219924.1 198283603 6877463 complement(1448418..1449410) 1 NC_011206.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: noc:Noc_2110 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component; transketolase central region 1449410 6877463 Lferr_1489 Acidithiobacillus ferrooxidans ATCC 53993 transketolase central region YP_002219924.1 1448418 R 380394 CDS YP_002219925.1 198283604 6877464 complement(1449407..1450495) 1 NC_011206.1 PFAM: dehydrogenase E1 component; KEGG: gme:Gmet_2760 dehydrogenase, E1 component; pyruvate dehydrogenase (acetyl-transferring) 1450495 6877464 Lferr_1490 Acidithiobacillus ferrooxidans ATCC 53993 pyruvate dehydrogenase (acetyl-transferring) YP_002219925.1 1449407 R 380394 CDS YP_002219926.1 198283605 6877465 complement(1450464..1450814) 1 NC_011206.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sun:SUN_0964 hypothetical protein; AhpD family alkylhydroperoxidase-like protein 1450814 6877465 Lferr_1491 Acidithiobacillus ferrooxidans ATCC 53993 AhpD family alkylhydroperoxidase-like protein YP_002219926.1 1450464 R 380394 CDS YP_002219927.1 198283606 6877466 complement(1450850..1452373) 1 NC_011206.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1452373 6877466 Lferr_1492 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglyceromutase YP_002219927.1 1450850 R 380394 CDS YP_002219928.1 198283607 6877467 complement(1452370..1454781) 1 NC_011206.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: mva:Mvan_4106 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 1454781 6877467 Lferr_1493 Acidithiobacillus ferrooxidans ATCC 53993 phosphoenolpyruvate synthase YP_002219928.1 1452370 R 380394 CDS YP_002219929.1 198283608 6877468 complement(1454876..1455838) 1 NC_011206.1 PFAM: sulfotransferase; KEGG: amr:AM1_5717 sulfotransferase; sulfotransferase 1455838 6877468 Lferr_1494 Acidithiobacillus ferrooxidans ATCC 53993 sulfotransferase YP_002219929.1 1454876 R 380394 CDS YP_002219930.1 198283609 6877469 complement(1455850..1456674) 1 NC_011206.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mca:MCA2972 rare lipoprotein A domain protein; rare lipoprotein A 1456674 6877469 Lferr_1495 Acidithiobacillus ferrooxidans ATCC 53993 rare lipoprotein A YP_002219930.1 1455850 R 380394 CDS YP_002219931.1 198283610 6877470 complement(1456664..1457812) 1 NC_011206.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1457812 6877470 Lferr_1496 Acidithiobacillus ferrooxidans ATCC 53993 succinyl-diaminopimelate desuccinylase YP_002219931.1 1456664 R 380394 CDS YP_002219932.1 198283611 6877471 complement(1457824..1458648) 1 NC_011206.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: bmu:Bmul_1247 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1458648 6877471 Lferr_1497 Acidithiobacillus ferrooxidans ATCC 53993 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_002219932.1 1457824 R 380394 CDS YP_002219933.1 198283612 6877472 complement(1458662..1459867) 1 NC_011206.1 PFAM: aminotransferase class I and II; KEGG: aeh:Mlg_1866 hypothetical protein; class I/II aminotransferase 1459867 6877472 Lferr_1498 Acidithiobacillus ferrooxidans ATCC 53993 class I/II aminotransferase YP_002219933.1 1458662 R 380394 CDS YP_002219934.1 198283613 6877473 1460224..1460973 1 NC_011206.1 KEGG: nmu:Nmul_A1849 protein of unknown function DUF6; hypothetical protein 1460973 6877473 Lferr_1499 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219934.1 1460224 D 380394 CDS YP_002219935.1 198283614 6877474 complement(1460935..1461609) 1 NC_011206.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpa:BPP3137 phosphoglycolate phosphatase 2; phosphoglycolate phosphatase 1461609 6877474 Lferr_1500 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglycolate phosphatase YP_002219935.1 1460935 R 380394 CDS YP_002219936.1 198283615 6877475 complement(1461602..1462309) 1 NC_011206.1 KEGG: mfa:Mfla_1576 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; ubiquinone biosynthesis O-methyltransferase 1462309 6877475 Lferr_1501 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinone biosynthesis O-methyltransferase YP_002219936.1 1461602 R 380394 CDS YP_002219937.1 198283616 6877476 complement(1462306..1463631) 1 NC_011206.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: aeh:Mlg_0911 N-ethylammeline chlorohydrolase; amidohydrolase 1463631 6877476 Lferr_1502 Acidithiobacillus ferrooxidans ATCC 53993 amidohydrolase YP_002219937.1 1462306 R 380394 CDS YP_002219938.1 198283617 6877477 complement(1463711..1464727) 1 NC_011206.1 KEGG: aeh:Mlg_0174 lytic murein transglycosylase B; lytic murein transglycosylase B 1464727 6877477 Lferr_1503 Acidithiobacillus ferrooxidans ATCC 53993 lytic murein transglycosylase B YP_002219938.1 1463711 R 380394 CDS YP_002219939.1 198283618 6877478 complement(1464934..1465500) 1 NC_011206.1 PFAM: NLP/P60 protein; KEGG: mca:MCA2789 NLP/P60 family protein; NLP/P60 protein 1465500 6877478 Lferr_1504 Acidithiobacillus ferrooxidans ATCC 53993 NLP/P60 protein YP_002219939.1 1464934 R 380394 CDS YP_002219940.1 198283619 6877480 complement(1466261..1466914) 1 NC_011206.1 PFAM: toluene tolerance family protein; KEGG: azo:azo0810 conserved hypothetical secreted protein; toluene tolerance family protein 1466914 6877480 Lferr_1505 Acidithiobacillus ferrooxidans ATCC 53993 toluene tolerance family protein YP_002219940.1 1466261 R 380394 CDS YP_002219941.1 198283620 6877481 complement(1466946..1467488) 1 NC_011206.1 KEGG: noc:Noc_1000 hypothetical protein; hypothetical protein 1467488 6877481 Lferr_1506 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219941.1 1466946 R 380394 CDS YP_002219942.1 198283621 6877482 complement(1467516..1468298) 1 NC_011206.1 KEGG: syf:Synpcc7942_1895 hypothetical protein; hypothetical protein 1468298 6877482 Lferr_1507 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219942.1 1467516 R 380394 CDS YP_002219943.1 198283622 6877483 complement(1468320..1469270) 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: ssn:SSON_2889 RNA polymerase sigma factor RpoS; RpoD family RNA polymerase sigma-70 subunit 1469270 6877483 Lferr_1508 Acidithiobacillus ferrooxidans ATCC 53993 RpoD family RNA polymerase sigma-70 subunit YP_002219943.1 1468320 R 380394 CDS YP_002219944.1 198283623 6877484 complement(1469292..1469648) 1 NC_011206.1 hypothetical protein 1469648 6877484 Lferr_1509 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219944.1 1469292 R 380394 CDS YP_002219945.1 198283624 6877485 1470002..1471321 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1471321 6877485 Lferr_1510 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219945.1 1470002 D 380394 CDS YP_002219946.1 198283625 6877486 1471443..1471757 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 1471757 6877486 Lferr_1511 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002219946.1 1471443 D 380394 CDS YP_002219947.1 198283626 6877487 1472062..1473381 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1473381 6877487 Lferr_1512 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219947.1 1472062 D 380394 CDS YP_002219948.1 198283627 6877489 complement(1474400..1474804) 1 NC_011206.1 KEGG: bcm:Bcenmc03_5743 hypothetical protein; hypothetical protein 1474804 6877489 Lferr_1514 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219948.1 1474400 R 380394 CDS YP_002219949.1 198283628 6877490 complement(1474906..1475733) 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p1B267 transposition helper protein; IstB domain-containing ATP-binding protein 1475733 6877490 Lferr_1515 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002219949.1 1474906 R 380394 CDS YP_002219950.1 198283629 6877491 complement(1475730..1477214) 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: eba:p2A256 transposase; integrase catalytic subunit 1477214 6877491 Lferr_1516 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002219950.1 1475730 R 380394 CDS YP_002219951.1 198283630 6877493 1477753..1478169 1 NC_011206.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: net:Neut_1850 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 1478169 6877493 Lferr_1518 Acidithiobacillus ferrooxidans ATCC 53993 Glyoxalase/bleomycin resistance protein/dioxygenase YP_002219951.1 1477753 D 380394 CDS YP_002219952.1 198283631 6877495 1479694..1479900 1 NC_011206.1 hypothetical protein 1479900 6877495 Lferr_1520 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219952.1 1479694 D 380394 CDS YP_002219953.1 198283632 6877497 1480271..1482301 1 NC_011206.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rca:Rcas_0416 transketolase; transketolase 1482301 6877497 Lferr_1522 Acidithiobacillus ferrooxidans ATCC 53993 transketolase YP_002219953.1 1480271 D 380394 CDS YP_002219954.1 198283633 6877498 1482484..1483104 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Protein of unknown function DUF1971; KEGG: bte:BTH_I1696 ferredoxin; hypothetical protein 1483104 6877498 Lferr_1523 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219954.1 1482484 D 380394 CDS YP_002219955.1 198283634 6877499 1483114..1483353 1 NC_011206.1 KEGG: swi:Swit_0147 hypothetical protein; hypothetical protein 1483353 6877499 Lferr_1524 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219955.1 1483114 D 380394 CDS YP_002219956.1 198283635 6877500 1483385..1484473 1 NC_011206.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: rfr:Rfer_4140 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 1484473 6877500 Lferr_1525 Acidithiobacillus ferrooxidans ATCC 53993 C4-dicarboxylate transporter/malic acid transport protein YP_002219956.1 1483385 D 380394 CDS YP_002219957.1 198283636 6877502 complement(1484740..1485708) 1 NC_011206.1 PFAM: HhH-GPD family protein; KEGG: scl:sce7864 putative DNA-3-methyladenine glycosidase; HhH-GPD family protein 1485708 6877502 Lferr_1527 Acidithiobacillus ferrooxidans ATCC 53993 HhH-GPD family protein YP_002219957.1 1484740 R 380394 CDS YP_002219958.1 198283637 6877504 complement(1486256..1486900) 1 NC_011206.1 PFAM: glycosyl transferase family 2; KEGG: cte:CT1271 glycosyl transferase; family 2 glycosyl transferase 1486900 6877504 Lferr_1529 Acidithiobacillus ferrooxidans ATCC 53993 family 2 glycosyl transferase YP_002219958.1 1486256 R 380394 CDS YP_002219959.1 198283638 6877505 complement(1487076..1487294) 1 NC_011206.1 hypothetical protein 1487294 6877505 Lferr_1530 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219959.1 1487076 R 380394 CDS YP_002219960.1 198283639 6877506 complement(1487304..1487501) 1 NC_011206.1 hypothetical protein 1487501 6877506 Lferr_1531 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219960.1 1487304 R 380394 CDS YP_002219961.1 198283640 6877507 complement(1487610..1488866) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gsu:GSU0493 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1488866 6877507 Lferr_1532 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002219961.1 1487610 R 380394 CDS YP_002219962.1 198283641 6877508 complement(1488859..1490016) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_7579 major facilitator superfamily MFS_1; major facilitator superfamily protein 1490016 6877508 Lferr_1533 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002219962.1 1488859 R 380394 CDS YP_002219963.1 198283642 6877509 complement(1490013..1491545) 1 NC_011206.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: gvi:glr1163 hypothetical protein; FAD dependent oxidoreductase 1491545 6877509 Lferr_1534 Acidithiobacillus ferrooxidans ATCC 53993 FAD dependent oxidoreductase YP_002219963.1 1490013 R 380394 CDS YP_002219964.1 198283643 6877510 complement(1491535..1492320) 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tac:Ta0191 probable glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR 1492320 6877510 Lferr_1535 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002219964.1 1491535 R 380394 CDS YP_002219965.1 198283644 6877511 complement(1492317..1492859) 1 NC_011206.1 KEGG: bbt:BBta_p0098 putative glucoamylase precursor; hypothetical protein 1492859 6877511 Lferr_1536 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219965.1 1492317 R 380394 CDS YP_002219966.1 198283645 6877512 1493353..1493682 1 NC_011206.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 1493682 phhB 6877512 phhB Acidithiobacillus ferrooxidans ATCC 53993 pterin-4-alpha-carbinolamine dehydratase YP_002219966.1 1493353 D 380394 CDS YP_002219967.1 198283646 6877513 1494237..1494461 1 NC_011206.1 PFAM: Heavy metal transport/detoxification protein; KEGG: ttj:TTHA1718 heavy metal binding protein; heavy metal transport/detoxification protein 1494461 6877513 Lferr_1538 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal transport/detoxification protein YP_002219967.1 1494237 D 380394 CDS YP_002219968.1 198283647 6877514 1494722..1494913 1 NC_011206.1 KEGG: mxa:MXAN_2316 EF hand domain protein; EF hand domain-containing protein 1494913 6877514 Lferr_1539 Acidithiobacillus ferrooxidans ATCC 53993 EF hand domain-containing protein YP_002219968.1 1494722 D 380394 CDS YP_002219969.1 198283648 6877515 1495051..1495317 1 NC_011206.1 KEGG: ppf:Pput_4104 hypothetical protein; hypothetical protein 1495317 6877515 Lferr_1540 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219969.1 1495051 D 380394 CDS YP_002219970.1 198283649 6877516 1495441..1495938 1 NC_011206.1 KEGG: mka:MK1679 predicted nucletide kinase; hypothetical protein 1495938 6877516 Lferr_1541 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219970.1 1495441 D 380394 CDS YP_002219971.1 198283650 6877517 complement(1495939..1496358) 1 NC_011206.1 KEGG: gdi:GDI1906 hypothetical protein; hypothetical protein 1496358 6877517 Lferr_1542 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219971.1 1495939 R 380394 CDS YP_002219972.1 198283651 6877518 1496554..1497171 1 NC_011206.1 KEGG: yps:YPTB0370 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein; LexA family transcriptional repressor 1497171 6877518 Lferr_1543 Acidithiobacillus ferrooxidans ATCC 53993 LexA family transcriptional repressor YP_002219972.1 1496554 D 380394 CDS YP_002219973.1 198283652 6877519 1497168..1497812 1 NC_011206.1 KEGG: aeh:Mlg_1095 hypothetical protein; hypothetical protein 1497812 6877519 Lferr_1544 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219973.1 1497168 D 380394 CDS YP_002219974.1 198283653 6877520 1497819..1499231 1 NC_011206.1 KEGG: tbd:Tbd_0829 hypothetical protein; hypothetical protein 1499231 6877520 Lferr_1545 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219974.1 1497819 D 380394 CDS YP_002219975.1 198283654 6877521 1499209..1502271 1 NC_011206.1 KEGG: tbd:Tbd_0828 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; DNA polymerase III subunit alpha 1502271 6877521 Lferr_1546 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit alpha YP_002219975.1 1499209 D 380394 CDS YP_002219976.1 198283655 6877522 1502428..1503279 1 NC_011206.1 KEGG: tbd:Tbd_2787 disulfide isomerase/thiol-disulfide oxidase; hypothetical protein 1503279 6877522 Lferr_1547 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219976.1 1502428 D 380394 CDS YP_002219977.1 198283656 6877523 1503276..1505903 1 NC_011206.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: aeh:Mlg_1592 Alanyl aminopeptidase. Metallo peptidase. MEROPS family M01; aminopeptidase N 1505903 pepN 6877523 pepN Acidithiobacillus ferrooxidans ATCC 53993 aminopeptidase N YP_002219977.1 1503276 D 380394 CDS YP_002219978.1 198283657 6877524 complement(1505945..1507414) 1 NC_011206.1 PFAM: adenylate cyclase; KEGG: eba:ebA978 hypothetical protein; adenylate cyclase 1507414 6877524 Lferr_1549 Acidithiobacillus ferrooxidans ATCC 53993 adenylate cyclase YP_002219978.1 1505945 R 380394 CDS YP_002219979.1 198283658 6877525 complement(1507398..1508036) 1 NC_011206.1 KEGG: cvi:CV_2923 probable partition-related protein; partition-like protein 1508036 6877525 Lferr_1550 Acidithiobacillus ferrooxidans ATCC 53993 partition-like protein YP_002219979.1 1507398 R 380394 CDS YP_002219980.1 198283659 6877526 complement(1508049..1510154) 1 NC_011206.1 PFAM: Polyphosphate kinase; KEGG: noc:Noc_2388 polyphosphate kinase; polyphosphate kinase 1510154 6877526 Lferr_1551 Acidithiobacillus ferrooxidans ATCC 53993 polyphosphate kinase YP_002219980.1 1508049 R 380394 CDS YP_002219981.1 198283660 6877527 complement(1510147..1511013) 1 NC_011206.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pap:PSPA7_3507 5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase; methylenetetrahydrofolate dehydrogenase 1511013 6877527 Lferr_1552 Acidithiobacillus ferrooxidans ATCC 53993 methylenetetrahydrofolate dehydrogenase YP_002219981.1 1510147 R 380394 CDS YP_002219982.1 198283661 6877528 complement(1511248..1514328) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: gur:Gura_0528 acriflavin resistance protein; acriflavin resistance protein 1514328 6877528 Lferr_1553 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002219982.1 1511248 R 380394 CDS YP_002219983.1 198283662 6877529 complement(1514340..1515431) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cbd:COXBU7E912_1194 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1515431 6877529 Lferr_1554 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002219983.1 1514340 R 380394 CDS YP_002219984.1 198283663 6877530 complement(1515475..1517022) 1 NC_011206.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gur:Gura_0526 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system, outer membrane lipoprotein 1517022 6877530 Lferr_1555 Acidithiobacillus ferrooxidans ATCC 53993 NodT family RND efflux system, outer membrane lipoprotein YP_002219984.1 1515475 R 380394 CDS YP_002219985.1 198283664 6877531 1517245..1518033 1 NC_011206.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: pnu:Pnuc_1304 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1518033 6877531 Lferr_1556 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219985.1 1517245 D 380394 CDS YP_002219986.1 198283665 6877532 complement(1518100..1518678) 1 NC_011206.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: aav:Aave_1179 maf protein; maf protein 1518678 6877532 Lferr_1557 Acidithiobacillus ferrooxidans ATCC 53993 maf protein YP_002219986.1 1518100 R 380394 CDS YP_002219987.1 198283666 6877533 complement(1518691..1521480) 1 NC_011206.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: noc:Noc_0770 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1521480 6877533 Lferr_1558 Acidithiobacillus ferrooxidans ATCC 53993 phosphoenolpyruvate carboxylase YP_002219987.1 1518691 R 380394 CDS YP_002219988.1 198283667 6877534 1521815..1522081 1 NC_011206.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: sde:Sde_2667 ubiquinone/menaquinone biosynthesis methyltransferase; RNA chaperone Hfq 1522081 6877534 Lferr_1559 Acidithiobacillus ferrooxidans ATCC 53993 RNA chaperone Hfq YP_002219988.1 1521815 D 380394 CDS YP_002219989.1 198283668 6877535 1522105..1523403 1 NC_011206.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: csa:Csal_1278 GTP-binding protein, HSR1-related; GTP-binding proten HflX 1523403 6877535 Lferr_1560 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding proten HflX YP_002219989.1 1522105 D 380394 CDS YP_002219990.1 198283669 6877536 1523418..1524611 1 NC_011206.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: noc:Noc_2588 HflK-like protein; HflK protein 1524611 6877536 Lferr_1561 Acidithiobacillus ferrooxidans ATCC 53993 HflK protein YP_002219990.1 1523418 D 380394 CDS YP_002219991.1 198283670 6877537 1524608..1525480 1 NC_011206.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: nmu:Nmul_A0444 HflC protein; HflC protein 1525480 6877537 Lferr_1562 Acidithiobacillus ferrooxidans ATCC 53993 HflC protein YP_002219991.1 1524608 D 380394 CDS YP_002219992.1 198283671 6877538 1525477..1526679 1 NC_011206.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: ppf:Pput_4766 ATP phosphoribosyltransferase regulatory subunit; tRNA synthetase class II (G H P and S) 1526679 6877538 Lferr_1563 Acidithiobacillus ferrooxidans ATCC 53993 tRNA synthetase class II (G H P and S) YP_002219992.1 1525477 D 380394 CDS YP_002219993.1 198283672 6877539 1526722..1528017 1 NC_011206.1 PFAM: adenylosuccinate synthetase; KEGG: tbd:Tbd_0607 adenylosuccinate synthetase; adenylosuccinate synthase 1528017 6877539 Lferr_1564 Acidithiobacillus ferrooxidans ATCC 53993 adenylosuccinate synthase YP_002219993.1 1526722 D 380394 CDS YP_002219994.1 198283673 6877541 1528192..1530432 1 NC_011206.1 KEGG: mca:MCA1976 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; ribonuclease R 1530432 6877541 Lferr_1565 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease R YP_002219994.1 1528192 D 380394 CDS YP_002219995.1 198283674 6877542 complement(1530450..1531235) 1 NC_011206.1 PFAM: protein of unknown function DUF344; KEGG: pla:Plav_1864 protein of unknown function DUF344; hypothetical protein 1531235 6877542 Lferr_1566 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002219995.1 1530450 R 380394 CDS YP_002219996.1 198283675 6877543 complement(1531270..1532658) 1 NC_011206.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1532658 6877543 Lferr_1567 Acidithiobacillus ferrooxidans ATCC 53993 dihydrolipoamide dehydrogenase YP_002219996.1 1531270 R 380394 CDS YP_002219997.1 198283676 6877544 complement(1532760..1533512) 1 NC_011206.1 PFAM: molybdopterin binding domain; KEGG: aeh:Mlg_1211 molybdopterin binding domain; molybdopterin binding domain-containing protein 1533512 6877544 Lferr_1568 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin binding domain-containing protein YP_002219997.1 1532760 R 380394 CDS YP_002219998.1 198283677 6877545 complement(1533788..1534816) 1 NC_011206.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcm:Bcenmc03_2913 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1534816 6877545 Lferr_1569 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS116/IS110/IS902 family protein YP_002219998.1 1533788 R 380394 CDS YP_002219999.1 198283678 6877546 complement(1534939..1535598) 1 NC_011206.1 KEGG: azo:azo3124 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 1535598 6877546 Lferr_1570 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylglycinamide formyltransferase YP_002219999.1 1534939 R 380394 CDS YP_002220000.1 198283679 6877547 complement(1535935..1536963) 1 NC_011206.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcm:Bcenmc03_2913 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1536963 6877547 Lferr_1571 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS116/IS110/IS902 family protein YP_002220000.1 1535935 R 380394 CDS YP_002220001.1 198283680 6877548 complement(1537086..1537745) 1 NC_011206.1 KEGG: azo:azo3124 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 1537745 6877548 Lferr_1572 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylglycinamide formyltransferase YP_002220001.1 1537086 R 380394 CDS YP_002220002.1 198283681 6877549 complement(1537738..1538817) 1 NC_011206.1 KEGG: bpt:Bpet0825 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 1538817 6877549 Lferr_1573 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylformylglycinamidine cyclo-ligase YP_002220002.1 1537738 R 380394 CDS YP_002220003.1 198283682 6877550 complement(1538920..1539537) 1 NC_011206.1 PFAM: manganese and iron superoxide dismutase; KEGG: det:DET0956 superoxide dismutase; manganese and iron superoxide dismutase 1539537 6877550 Lferr_1574 Acidithiobacillus ferrooxidans ATCC 53993 manganese and iron superoxide dismutase YP_002220003.1 1538920 R 380394 CDS YP_002220004.1 198283683 6877551 1539694..1540242 1 NC_011206.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mgm:Mmc1_2314 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1540242 6877551 Lferr_1575 Acidithiobacillus ferrooxidans ATCC 53993 CDP-alcohol phosphatidyltransferase YP_002220004.1 1539694 D 380394 CDS YP_002220005.1 198283684 6877552 1540239..1540952 1 NC_011206.1 TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: ppf:Pput_4050 DNA replication initiation factor; DnaA regulatory inactivator Hda 1540952 6877552 Lferr_1576 Acidithiobacillus ferrooxidans ATCC 53993 DnaA regulatory inactivator Hda YP_002220005.1 1540239 D 380394 CDS YP_002220006.1 198283685 6877553 1540949..1541833 1 NC_011206.1 PFAM: ribonuclease BN; KEGG: abo:ABO_1543 ribonuclease BN-like family protein; ribonuclease BN 1541833 6877553 Lferr_1577 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease BN YP_002220006.1 1540949 D 380394 CDS YP_002220007.1 198283686 6877554 1541928..1542389 1 NC_011206.1 KEGG: csa:Csal_1597 protein of unknown function DUF177; hypothetical protein 1542389 6877554 Lferr_1578 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220007.1 1541928 D 380394 CDS YP_002220008.1 198283687 6877555 1542429..1542614 1 NC_011206.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1542614 rpmF 6877555 rpmF Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L32 YP_002220008.1 1542429 D 380394 CDS YP_002220009.1 198283688 6877556 1542652..1543677 1 NC_011206.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: tbd:Tbd_1552 fatty acid/phospholipid synthesis protein; fatty acid/phospholipid synthesis protein PlsX 1543677 6877556 Lferr_1580 Acidithiobacillus ferrooxidans ATCC 53993 fatty acid/phospholipid synthesis protein PlsX YP_002220009.1 1542652 D 380394 CDS YP_002220010.1 198283689 6877557 1543674..1544618 1 NC_011206.1 KEGG: mfa:Mfla_1507 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1544618 6877557 Lferr_1581 Acidithiobacillus ferrooxidans ATCC 53993 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002220010.1 1543674 D 380394 CDS YP_002220011.1 198283690 6877558 1544657..1545592 1 NC_011206.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ssn:SSON_1112 malonyl-CoA-[acyl-carrier-protein] transacylase; malonyl CoA-acyl carrier protein transacylase 1545592 6877558 Lferr_1582 Acidithiobacillus ferrooxidans ATCC 53993 malonyl CoA-acyl carrier protein transacylase YP_002220011.1 1544657 D 380394 CDS YP_002220012.1 198283691 6877559 1545592..1546341 1 NC_011206.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1625 3-ketoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1546341 6877559 Lferr_1583 Acidithiobacillus ferrooxidans ATCC 53993 3-oxoacyl-(acyl-carrier-protein) reductase YP_002220012.1 1545592 D 380394 CDS YP_002220013.1 198283692 6877560 1546426..1546674 1 NC_011206.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1546674 acpP 6877560 acpP Acidithiobacillus ferrooxidans ATCC 53993 acyl carrier protein YP_002220013.1 1546426 D 380394 CDS YP_002220014.1 198283693 6877561 1546711..1547952 1 NC_011206.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: eba:ebA5459 beta-ketoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 1547952 6877561 Lferr_1585 Acidithiobacillus ferrooxidans ATCC 53993 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002220014.1 1546711 D 380394 CDS YP_002220015.1 198283694 6877562 1547982..1548815 1 NC_011206.1 KEGG: aeh:Mlg_1418 aminodeoxychorismate lyase apoprotein; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; aminodeoxychorismate lyase 1548815 6877562 Lferr_1586 Acidithiobacillus ferrooxidans ATCC 53993 aminodeoxychorismate lyase YP_002220015.1 1547982 D 380394 CDS YP_002220016.1 198283695 6877563 1548827..1549825 1 NC_011206.1 PFAM: aminodeoxychorismate lyase; KEGG: azo:azo1594 hypothetical protein; aminodeoxychorismate lyase 1549825 6877563 Lferr_1587 Acidithiobacillus ferrooxidans ATCC 53993 aminodeoxychorismate lyase YP_002220016.1 1548827 D 380394 CDS YP_002220017.1 198283696 6877564 1549822..1550466 1 NC_011206.1 PFAM: thymidylate kinase; KEGG: eba:ebA5415 thymidylate kinase; dTMP kinase 1550466 6877564 Lferr_1588 Acidithiobacillus ferrooxidans ATCC 53993 dTMP kinase YP_002220017.1 1549822 D 380394 CDS YP_002220018.1 198283697 6877565 1550463..1551464 1 NC_011206.1 KEGG: mca:MCA1995 DNA polymerase III, delta prime subunit; DNA-directed DNA polymerase 1551464 6877565 Lferr_1589 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed DNA polymerase YP_002220018.1 1550463 D 380394 CDS YP_002220019.1 198283698 6877566 1551448..1551804 1 NC_011206.1 PFAM: type IV pilus assembly PilZ; KEGG: xom:XOO_0812 type IV fimbriae assembly protein; type IV pilus assembly PilZ 1551804 6877566 Lferr_1590 Acidithiobacillus ferrooxidans ATCC 53993 type IV pilus assembly PilZ YP_002220019.1 1551448 D 380394 CDS YP_002220020.1 198283699 6877569 1552154..1553872 1 NC_011206.1 KEGG: mca:MCA1328 DNA polymerase III, gamma and tau subunits, programmed frameshift; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 1553872 6877569 Lferr_1591 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunits gamma and tau YP_002220020.1 1552154 D 380394 CDS YP_002220021.1 198283700 6877570 1553892..1554215 1 NC_011206.1 PFAM: conserved hypothetical protein; KEGG: ilo:IL1848 hypothetical protein; hypothetical protein 1554215 6877570 Lferr_1592 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220021.1 1553892 D 380394 CDS YP_002220022.1 198283701 6877571 1554222..1554821 1 NC_011206.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1554821 recR 6877571 recR Acidithiobacillus ferrooxidans ATCC 53993 recombination protein RecR YP_002220022.1 1554222 D 380394 CDS YP_002220023.1 198283702 6877572 1554881..1556098 1 NC_011206.1 PFAM: Rh family protein/ammonium transporter; KEGG: tbd:Tbd_1701 putative ammonium transporter; Rh family protein/ammonium transporter 1556098 6877572 Lferr_1594 Acidithiobacillus ferrooxidans ATCC 53993 Rh family protein/ammonium transporter YP_002220023.1 1554881 D 380394 CDS YP_002220024.1 198283703 6877573 1556101..1556952 1 NC_011206.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; KEGG: ppw:PputW619_4690 carbohydrate kinase, YjeF related protein; carbohydrate kinase 1556952 6877573 Lferr_1595 Acidithiobacillus ferrooxidans ATCC 53993 carbohydrate kinase YP_002220024.1 1556101 D 380394 CDS YP_002220025.1 198283704 6877574 1556939..1558288 1 NC_011206.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aae:aq_170 DapA aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1558288 6877574 Lferr_1596 Acidithiobacillus ferrooxidans ATCC 53993 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002220025.1 1556939 D 380394 CDS YP_002220026.1 198283705 6877575 1558288..1558743 1 NC_011206.1 PFAM: CBS domain containing protein; KEGG: mgm:Mmc1_0960 CBS domain containing membrane protein; hypothetical protein 1558743 6877575 Lferr_1597 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220026.1 1558288 D 380394 CDS YP_002220027.1 198283706 6877576 1558756..1559241 1 NC_011206.1 PFAM: protein of unknown function UPF0079; KEGG: hch:HCH_05388 predicted ATPase or kinase; hypothetical protein 1559241 6877576 Lferr_1598 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220027.1 1558756 D 380394 CDS YP_002220028.1 198283707 6877577 1559231..1561018 1 NC_011206.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: pfo:Pfl_0521 DNA mismatch repair protein; DNA mismatch repair protein MutL 1561018 6877577 Lferr_1599 Acidithiobacillus ferrooxidans ATCC 53993 DNA mismatch repair protein MutL YP_002220028.1 1559231 D 380394 CDS YP_002220029.1 198283708 6877578 1561015..1561962 1 NC_011206.1 KEGG: aeh:Mlg_0572 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1561962 6877578 Lferr_1600 Acidithiobacillus ferrooxidans ATCC 53993 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002220029.1 1561015 D 380394 CDS YP_002220030.1 198283709 6877579 1562122..1562547 1 NC_011206.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1562547 ndk 6877579 ndk Acidithiobacillus ferrooxidans ATCC 53993 nucleoside diphosphate kinase YP_002220030.1 1562122 D 380394 CDS YP_002220031.1 198283710 6877580 1562548..1563639 1 NC_011206.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: noc:Noc_0900 conserved hypothetical protein 48; radical SAM enzyme, Cfr family 1563639 6877580 Lferr_1602 Acidithiobacillus ferrooxidans ATCC 53993 radical SAM enzyme, Cfr family YP_002220031.1 1562548 D 380394 CDS YP_002220032.1 198283711 6877581 1563714..1564481 1 NC_011206.1 KEGG: mfa:Mfla_1622 tetratricopeptide TPR_2; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1564481 6877581 Lferr_1603 Acidithiobacillus ferrooxidans ATCC 53993 type IV pilus biogenesis/stability protein PilW YP_002220032.1 1563714 D 380394 CDS YP_002220033.1 198283712 6877582 1564493..1565473 1 NC_011206.1 SMART: helix-turn-helix domain protein; KEGG: azo:azo0926 transcriptional regulator; XRE family transcriptional regulator 1565473 6877582 Lferr_1604 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002220033.1 1564493 D 380394 CDS YP_002220034.1 198283713 6877583 1565463..1566563 1 NC_011206.1 KEGG: csa:Csal_2854 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1566563 6877583 Lferr_1605 Acidithiobacillus ferrooxidans ATCC 53993 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_002220034.1 1565463 D 380394 CDS YP_002220035.1 198283714 6877584 1566599..1567918 1 NC_011206.1 KEGG: stm:STM2522 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1567918 6877584 Lferr_1606 Acidithiobacillus ferrooxidans ATCC 53993 histidyl-tRNA synthetase YP_002220035.1 1566599 D 380394 CDS YP_002220036.1 198283715 6877585 1567915..1568526 1 NC_011206.1 KEGG: noc:Noc_0820 hypothetical protein; hypothetical protein 1568526 6877585 Lferr_1607 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220036.1 1567915 D 380394 CDS YP_002220037.1 198283716 6877586 1568523..1569710 1 NC_011206.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: lpc:LPC_0963 PQQ (pyrrolo quinoline) WD40-like repeat, enzyme repeat domain protein; outer membrane assembly lipoprotein YfgL 1569710 6877586 Lferr_1608 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane assembly lipoprotein YfgL YP_002220037.1 1568523 D 380394 CDS YP_002220038.1 198283717 6877587 1569722..1571071 1 NC_011206.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1571071 engA 6877587 engA Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein EngA YP_002220038.1 1569722 D 380394 CDS YP_002220039.1 198283718 6877588 1571072..1571467 1 NC_011206.1 hypothetical protein 1571467 6877588 Lferr_1610 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220039.1 1571072 D 380394 CDS YP_002220040.1 198283719 6877589 1571650..1572738 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: acr:Acry_1915 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein 1572738 6877589 Lferr_1611 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter substrate-binding protein YP_002220040.1 1571650 D 380394 CDS YP_002220041.1 198283720 6877590 1572863..1573819 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_1916 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 1573819 6877590 Lferr_1612 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter permease YP_002220041.1 1572863 D 380394 CDS YP_002220042.1 198283721 6877591 1573819..1574730 1 NC_011206.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_1917 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 1574730 6877591 Lferr_1613 Acidithiobacillus ferrooxidans ATCC 53993 phosphate ABC transporter permease YP_002220042.1 1573819 D 380394 CDS YP_002220043.1 198283722 6877592 complement(1574751..1575515) 1 NC_011206.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ade:Adeh_3512 hemerythrin HHE cation binding protein; Hemerythrin HHE cation-binding domain-containing protein 1575515 6877592 Lferr_1614 Acidithiobacillus ferrooxidans ATCC 53993 Hemerythrin HHE cation-binding domain-containing protein YP_002220043.1 1574751 R 380394 CDS YP_002220044.1 198283723 6877593 1576064..1576600 1 NC_011206.1 KEGG: tbd:Tbd_2787 disulfide isomerase/thiol-disulfide oxidase; disulfide isomerase/thiol-disulfide oxidase 1576600 6877593 Lferr_1615 Acidithiobacillus ferrooxidans ATCC 53993 disulfide isomerase/thiol-disulfide oxidase YP_002220044.1 1576064 D 380394 CDS YP_002220045.1 198283724 6877594 1576741..1577499 1 NC_011206.1 PFAM: protein of unknown function DUF81; KEGG: pca:Pcar_3013 hypothetical protein; hypothetical protein 1577499 6877594 Lferr_1616 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220045.1 1576741 D 380394 CDS YP_002220046.1 198283725 6877596 complement(1577778..1580888) 1 NC_011206.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mmr:Mmar10_0178 putative cation efflux system transmembrane protein; CzcA family heavy metal efflux pump 1580888 6877596 Lferr_1617 Acidithiobacillus ferrooxidans ATCC 53993 CzcA family heavy metal efflux pump YP_002220046.1 1577778 R 380394 CDS YP_002220047.1 198283726 6877597 complement(1580881..1582200) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_03019 membrane-fusion protein; RND family efflux transporter MFP subunit 1582200 6877597 Lferr_1618 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220047.1 1580881 R 380394 CDS YP_002220048.1 198283727 6877598 complement(1582197..1583480) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: lpc:LPC_2241 hypothetical protein; outer membrane efflux protein 1583480 6877598 Lferr_1619 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220048.1 1582197 R 380394 CDS YP_002220049.1 198283728 6877599 complement(1584168..1584635) 1 NC_011206.1 PFAM: PEBP family protein; KEGG: reh:H16_B1117 phospholipid-binding protein; PEBP family protein 1584635 6877599 Lferr_1620 Acidithiobacillus ferrooxidans ATCC 53993 PEBP family protein YP_002220049.1 1584168 R 380394 CDS YP_002220050.1 198283729 6877600 1585275..1586132 1 NC_011206.1 KEGG: mae:Maeo_0891 hypothetical protein; hypothetical protein 1586132 6877600 Lferr_1621 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220050.1 1585275 D 380394 CDS YP_002220051.1 198283730 6877601 1586347..1586562 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: har:HEAR2899 4Fe-4S ferredoxin-type protein; 4Fe-4S ferredoxin 1586562 6877601 Lferr_1622 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002220051.1 1586347 D 380394 CDS YP_002220052.1 198283731 6877603 complement(1586742..1587167) 1 NC_011206.1 PFAM: ferric-uptake regulator; KEGG: tbd:Tbd_1714 possible ferric uptake regulator (FUR) family; Fur family ferric uptake regulator 1587167 6877603 Lferr_1623 Acidithiobacillus ferrooxidans ATCC 53993 Fur family ferric uptake regulator YP_002220052.1 1586742 R 380394 CDS YP_002220053.1 198283732 6877604 complement(1587234..1588325) 1 NC_011206.1 PFAM: FAD dependent oxidoreductase; KEGG: noc:Noc_2269 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1588325 6877604 Lferr_1624 Acidithiobacillus ferrooxidans ATCC 53993 FAD dependent oxidoreductase YP_002220053.1 1587234 R 380394 CDS YP_002220054.1 198283733 6877605 complement(1588342..1591896) 1 NC_011206.1 PFAM: protein of unknown function DUF490; KEGG: gme:Gmet_2809 protein of unknown function DUF490; hypothetical protein 1591896 6877605 Lferr_1625 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220054.1 1588342 R 380394 CDS YP_002220055.1 198283734 6877606 complement(1591893..1593749) 1 NC_011206.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pca:Pcar_0188 hypothetical protein; surface antigen (D15) 1593749 6877606 Lferr_1626 Acidithiobacillus ferrooxidans ATCC 53993 surface antigen (D15) YP_002220055.1 1591893 R 380394 CDS YP_002220056.1 198283735 6877607 complement(1593930..1594193) 1 NC_011206.1 hypothetical protein 1594193 6877607 Lferr_1627 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220056.1 1593930 R 380394 CDS YP_002220057.1 198283736 6877608 complement(1594299..1595801) 1 NC_011206.1 KEGG: sus:Acid_1026 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1595801 6877608 Lferr_1628 Acidithiobacillus ferrooxidans ATCC 53993 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_002220057.1 1594299 R 380394 CDS YP_002220058.1 198283737 6877609 complement(1595835..1597073) 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce2060 hypothetical protein; major facilitator superfamily protein 1597073 6877609 Lferr_1629 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220058.1 1595835 R 380394 CDS YP_002220059.1 198283738 6877610 complement(1597133..1597633) 1 NC_011206.1 PFAM: cytochrome c class I; KEGG: dar:Daro_3321 cytochrome c, class I; cytochrome c class I 1597633 6877610 Lferr_1630 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c class I YP_002220059.1 1597133 R 380394 CDS YP_002220060.1 198283739 6877611 complement(1597708..1597965) 1 NC_011206.1 KEGG: stp:Strop_1435 hypothetical protein; hypothetical protein 1597965 6877611 Lferr_1631 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220060.1 1597708 R 380394 CDS YP_002220061.1 198283740 6877612 1598231..1599355 1 NC_011206.1 PFAM: fatty acid desaturase; KEGG: lil:LA0502 fatty acid desaturase; fatty acid desaturase 1599355 6877612 Lferr_1632 Acidithiobacillus ferrooxidans ATCC 53993 fatty acid desaturase YP_002220061.1 1598231 D 380394 CDS YP_002220062.1 198283741 6877613 complement(1599414..1599818) 1 NC_011206.1 KEGG: chu:CHU_2230 hypothetical protein; hypothetical protein 1599818 6877613 Lferr_1633 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220062.1 1599414 R 380394 CDS YP_002220063.1 198283742 6877614 complement(1599853..1600878) 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sat:SYN_01112 UDP-N-acetylglucosamine 4-epimerase; NAD-dependent epimerase/dehydratase 1600878 6877614 Lferr_1634 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002220063.1 1599853 R 380394 CDS YP_002220064.1 198283743 6877615 complement(1600854..1601843) 1 NC_011206.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: tbd:Tbd_0963 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1601843 6877615 Lferr_1635 Acidithiobacillus ferrooxidans ATCC 53993 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002220064.1 1600854 R 380394 CDS YP_002220065.1 198283744 6877616 1602002..1603987 1 NC_011206.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: tbd:Tbd_0539 monovalent cation:H+ antiporter-2, CPA2 family; sodium/hydrogen exchanger 1603987 6877616 Lferr_1636 Acidithiobacillus ferrooxidans ATCC 53993 sodium/hydrogen exchanger YP_002220065.1 1602002 D 380394 CDS YP_002220066.1 198283745 6877617 1604083..1606050 1 NC_011206.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: noc:Noc_0873 acetyl-CoA synthetase; acetate/CoA ligase 1606050 6877617 Lferr_1637 Acidithiobacillus ferrooxidans ATCC 53993 acetate/CoA ligase YP_002220066.1 1604083 D 380394 CDS YP_002220067.1 198283746 6877618 complement(1606221..1608821) 1 NC_011206.1 KEGG: aeh:Mlg_2558 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 1608821 6877618 Lferr_1638 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent chaperone ClpB YP_002220067.1 1606221 R 380394 CDS YP_002220068.1 198283747 6877619 complement(1608861..1610024) 1 NC_011206.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: aeh:Mlg_1227 major facilitator superfamily MFS_1; major facilitator superfamily protein 1610024 6877619 Lferr_1639 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220068.1 1608861 R 380394 CDS YP_002220069.1 198283748 6877620 complement(1610028..1611119) 1 NC_011206.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1611119 6877620 Lferr_1640 Acidithiobacillus ferrooxidans ATCC 53993 chorismate synthase YP_002220069.1 1610028 R 380394 CDS YP_002220070.1 198283749 6877621 complement(1611123..1611917) 1 NC_011206.1 PFAM: protein of unknown function DUF198; KEGG: noc:Noc_2039 protein of unknown function DUF198; hypothetical protein 1611917 6877621 Lferr_1641 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220070.1 1611123 R 380394 CDS YP_002220071.1 198283750 6877622 complement(1611959..1613833) 1 NC_011206.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: dar:Daro_3061 1-deoxy-D-xylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 1613833 6877622 Lferr_1642 Acidithiobacillus ferrooxidans ATCC 53993 deoxyxylulose-5-phosphate synthase YP_002220071.1 1611959 R 380394 CDS YP_002220072.1 198283751 6877623 complement(1613830..1614750) 1 NC_011206.1 PFAM: Polyprenyl synthetase; KEGG: mca:MCA0818 geranyltranstransferase; polyprenyl synthetase 1614750 6877623 Lferr_1643 Acidithiobacillus ferrooxidans ATCC 53993 polyprenyl synthetase YP_002220072.1 1613830 R 380394 CDS YP_002220073.1 198283752 6877624 complement(1614747..1614995) 1 NC_011206.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: ent:Ent638_0889 exodeoxyribonuclease VII small subunit; exodeoxyribonuclease VII small subunit 1614995 6877624 Lferr_1644 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease VII small subunit YP_002220073.1 1614747 R 380394 CDS YP_002220074.1 198283753 6877625 1615127..1616338 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_1422 major facilitator superfamily MFS_1; major facilitator superfamily protein 1616338 6877625 Lferr_1645 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220074.1 1615127 D 380394 CDS YP_002220075.1 198283754 6877626 1616459..1617286 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: psa:PST_3955 TonB protein, C-terminal domain; TonB family protein 1617286 6877626 Lferr_1646 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002220075.1 1616459 D 380394 CDS YP_002220076.1 198283755 6877627 complement(1617338..1617709) 1 NC_011206.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_0223 thioredoxin; thioredoxin 1617709 6877627 Lferr_1647 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin YP_002220076.1 1617338 R 380394 CDS YP_002220077.1 198283756 6877628 1617860..1619200 1 NC_011206.1 KEGG: maq:Maqu_1729 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1619200 6877628 Lferr_1648 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease VII large subunit YP_002220077.1 1617860 D 380394 CDS YP_002220078.1 198283757 6877629 complement(1619308..1620768) 1 NC_011206.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sto:ST2402 hypothetical outer membrane protein; pyrrolo-quinoline quinone 1620768 6877629 Lferr_1649 Acidithiobacillus ferrooxidans ATCC 53993 pyrrolo-quinoline quinone YP_002220078.1 1619308 R 380394 CDS YP_002220079.1 198283758 6877630 complement(1620838..1621284) 1 NC_011206.1 KEGG: mes:Meso_1398 hypothetical protein; hypothetical protein 1621284 6877630 Lferr_1650 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220079.1 1620838 R 380394 CDS YP_002220080.1 198283759 6877631 complement(1621478..1621615) 1 NC_011206.1 hypothetical protein 1621615 6877631 Lferr_1651 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220080.1 1621478 R 380394 CDS YP_002220081.1 198283760 6877632 1621748..1621918 1 NC_011206.1 hypothetical protein 1621918 6877632 Lferr_1652 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220081.1 1621748 D 380394 CDS YP_002220082.1 198283761 6877633 1621905..1622048 1 NC_011206.1 hypothetical protein 1622048 6877633 Lferr_1653 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220082.1 1621905 D 380394 CDS YP_002220083.1 198283762 6877634 1622027..1622203 1 NC_011206.1 hypothetical protein 1622203 6877634 Lferr_1654 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220083.1 1622027 D 380394 CDS YP_002220084.1 198283763 6877635 1622345..1622857 1 NC_011206.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: shn:Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1622857 6877635 Lferr_1655 Acidithiobacillus ferrooxidans ATCC 53993 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_002220084.1 1622345 D 380394 CDS YP_002220085.1 198283764 6877636 1622862..1623635 1 NC_011206.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: mfa:Mfla_0495 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 1623635 6877636 Lferr_1656 Acidithiobacillus ferrooxidans ATCC 53993 UDP-2,3-diacylglucosamine hydrolase YP_002220085.1 1622862 D 380394 CDS YP_002220086.1 198283765 6877637 1623667..1626150 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: azo:azo3149 putative cation-transporting P-type ATPase; HAD superfamily P-type ATPase 1626150 6877637 Lferr_1657 Acidithiobacillus ferrooxidans ATCC 53993 HAD superfamily P-type ATPase YP_002220086.1 1623667 D 380394 CDS YP_002220087.1 198283766 6877638 complement(1626240..1627943) 1 NC_011206.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: maq:Maqu_1732 2-isopropylmalate synthase; 2-isopropylmalate synthase 1627943 6877638 Lferr_1658 Acidithiobacillus ferrooxidans ATCC 53993 2-isopropylmalate synthase YP_002220087.1 1626240 R 380394 CDS YP_002220088.1 198283767 6877639 1628085..1628570 1 NC_011206.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: hch:HCH_05144 transcriptional regulator; asnC family transcriptional regulator 1628570 6877639 Lferr_1659 Acidithiobacillus ferrooxidans ATCC 53993 asnC family transcriptional regulator YP_002220088.1 1628085 D 380394 CDS YP_002220089.1 198283768 6877640 complement(1628703..1629989) 1 NC_011206.1 PFAM: outer membrane porin; KEGG: acr:Acry_0114 hypothetical protein; outer membrane porin 1629989 6877640 Lferr_1660 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane porin YP_002220089.1 1628703 R 380394 CDS YP_002220090.1 198283769 6877641 complement(1630068..1631270) 1 NC_011206.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: pfo:Pfl_1664 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 1631270 6877641 Lferr_1661 Acidithiobacillus ferrooxidans ATCC 53993 C4-dicarboxylate transporter/malic acid transport protein YP_002220090.1 1630068 R 380394 CDS YP_002220091.1 198283770 6877642 1631393..1632298 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppg:PputGB1_2243 transcriptional regulator, LysR family; LysR family transcriptional regulator 1632298 6877642 Lferr_1662 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002220091.1 1631393 D 380394 CDS YP_002220092.1 198283771 6877643 complement(1632496..1633167) 1 NC_011206.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: bcm:Bcenmc03_2717 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1633167 6877643 Lferr_1663 Acidithiobacillus ferrooxidans ATCC 53993 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002220092.1 1632496 R 380394 CDS YP_002220093.1 198283772 6877644 complement(1633727..1634440) 1 NC_011206.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: aby:ABAYE3758 putative autoinducer-binding transcriptional regulator (LuxR family); LuxR family transcriptional regulator 1634440 6877644 Lferr_1664 Acidithiobacillus ferrooxidans ATCC 53993 LuxR family transcriptional regulator YP_002220093.1 1633727 R 380394 CDS YP_002220094.1 198283773 6877645 1634650..1635033 1 NC_011206.1 KEGG: aby:ABAYE3760 hypothetical protein; hypothetical protein 1635033 6877645 Lferr_1665 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220094.1 1634650 D 380394 CDS YP_002220095.1 198283774 6877646 1635117..1635668 1 NC_011206.1 PFAM: autoinducer synthesis protein; KEGG: aby:ABAYE3761 N-acylhomoserine lactone synthase, autoinducer synthesis protein; autoinducer synthesis protein 1635668 6877646 Lferr_1666 Acidithiobacillus ferrooxidans ATCC 53993 autoinducer synthesis protein YP_002220095.1 1635117 D 380394 CDS YP_002220096.1 198283775 6877647 1635860..1636018 1 NC_011206.1 hypothetical protein 1636018 6877647 Lferr_1667 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220096.1 1635860 D 380394 CDS YP_002220097.1 198283776 6877648 complement(1636219..1636560) 1 NC_011206.1 PFAM: protein of unknown function DUF55; KEGG: ret:RHE_CH00838 hypothetical protein; hypothetical protein 1636560 6877648 Lferr_1668 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220097.1 1636219 R 380394 CDS YP_002220098.1 198283777 6877649 complement(1636644..1636928) 1 NC_011206.1 KEGG: mlo:mll3207 hypothetical protein; hypothetical protein 1636928 6877649 Lferr_1669 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220098.1 1636644 R 380394 CDS YP_002220099.1 198283778 6877650 complement(1637055..1637435) 1 NC_011206.1 KEGG: bpt:Bpet0790 ABC transporter, ATP-binding protein; hypothetical protein 1637435 6877650 Lferr_1670 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220099.1 1637055 R 380394 CDS YP_002220100.1 198283779 6877651 complement(1637488..1637943) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_0419 GNAT family acetyltransferase; N-acetyltransferase GCN5 1637943 6877651 Lferr_1671 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002220100.1 1637488 R 380394 CDS YP_002220101.1 198283780 6877652 complement(1637971..1638657) 1 NC_011206.1 PFAM: ThiJ/PfpI domain protein; KEGG: bam:Bamb_2705 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 1638657 6877652 Lferr_1672 Acidithiobacillus ferrooxidans ATCC 53993 ThiJ/PfpI domain-containing protein YP_002220101.1 1637971 R 380394 CDS YP_002220102.1 198283781 6877653 complement(1638654..1639313) 1 NC_011206.1 PFAM: Negative transcriptional regulator; KEGG: hau:Haur_4597 FMN-binding negative transcriptional regulator; FMN-binding negative transcriptional regulator 1639313 6877653 Lferr_1673 Acidithiobacillus ferrooxidans ATCC 53993 FMN-binding negative transcriptional regulator YP_002220102.1 1638654 R 380394 CDS YP_002220103.1 198283782 6877654 complement(1639327..1639974) 1 NC_011206.1 KEGG: rba:RB82 conserved hypothetical protein-putative cysteine protease; cysteine protease 1639974 6877654 Lferr_1674 Acidithiobacillus ferrooxidans ATCC 53993 cysteine protease YP_002220103.1 1639327 R 380394 CDS YP_002220104.1 198283783 6877655 complement(1639985..1640479) 1 NC_011206.1 KEGG: cvi:CV_1605 hypothetical protein; hypothetical protein 1640479 6877655 Lferr_1675 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220104.1 1639985 R 380394 CDS YP_002220105.1 198283784 6877656 complement(1640573..1641130) 1 NC_011206.1 KEGG: bcm:Bcenmc03_6538 hypothetical protein; hypothetical protein 1641130 6877656 Lferr_1676 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220105.1 1640573 R 380394 CDS YP_002220106.1 198283785 6877657 complement(1641239..1641850) 1 NC_011206.1 PFAM: regulatory protein TetR; KEGG: rpa:RPA3696 transcriptional regulator, TetR family; TetR family transcriptional regulator 1641850 6877657 Lferr_1677 Acidithiobacillus ferrooxidans ATCC 53993 TetR family transcriptional regulator YP_002220106.1 1641239 R 380394 CDS YP_002220107.1 198283786 6877658 1641925..1642281 1 NC_011206.1 KEGG: gbe:GbCGDNIH1_2412 hypothetical protein; hypothetical protein 1642281 6877658 Lferr_1678 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220107.1 1641925 D 380394 CDS YP_002220108.1 198283787 6877659 complement(1642286..1642759) 1 NC_011206.1 PFAM: regulatory protein MarR; KEGG: reu:Reut_A3276 regulatory protein, MarR; marR family transcriptional regulator 1642759 6877659 Lferr_1679 Acidithiobacillus ferrooxidans ATCC 53993 marR family transcriptional regulator YP_002220108.1 1642286 R 380394 CDS YP_002220109.1 198283788 6877660 1642827..1643306 1 NC_011206.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: reu:Reut_A3275 alkylhydroperoxidase AhpD core; AhpD family alkylhydroperoxidase-like protein 1643306 6877660 Lferr_1680 Acidithiobacillus ferrooxidans ATCC 53993 AhpD family alkylhydroperoxidase-like protein YP_002220109.1 1642827 D 380394 CDS YP_002220110.1 198283789 6877661 1643303..1643788 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_A3274 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1643788 6877661 Lferr_1681 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002220110.1 1643303 D 380394 CDS YP_002220111.1 198283790 6877663 complement(1644051..1644785) 1 NC_011206.1 PFAM: PspA/IM30 family protein; KEGG: hma:rrnAC3467 transcription regulator; phage shock protein A, PspA 1644785 6877663 Lferr_1682 Acidithiobacillus ferrooxidans ATCC 53993 phage shock protein A, PspA YP_002220111.1 1644051 R 380394 CDS YP_002220112.1 198283791 6877664 complement(1644825..1645649) 1 NC_011206.1 KEGG: mbb:BCG_1803c hypothetical protein; hypothetical protein 1645649 6877664 Lferr_1683 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220112.1 1644825 R 380394 CDS YP_002220113.1 198283792 6877665 complement(1645646..1646623) 1 NC_011206.1 KEGG: mbb:BCG_1803c hypothetical protein; hypothetical protein 1646623 6877665 Lferr_1684 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220113.1 1645646 R 380394 CDS YP_002220114.1 198283793 6877666 complement(1646639..1647019) 1 NC_011206.1 hypothetical protein 1647019 6877666 Lferr_1685 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220114.1 1646639 R 380394 CDS YP_002220115.1 198283794 6877667 complement(1647171..1649606) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: xcv:XCV2336 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 1649606 6877667 Lferr_1686 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal translocating P-type ATPase YP_002220115.1 1647171 R 380394 CDS YP_002220116.1 198283795 6877668 1649824..1651005 1 NC_011206.1 PFAM: aminotransferase class I and II; KEGG: noc:Noc_1138 aminotransferase, class I and II; class I/II aminotransferase 1651005 6877668 Lferr_1687 Acidithiobacillus ferrooxidans ATCC 53993 class I/II aminotransferase YP_002220116.1 1649824 D 380394 CDS YP_002220117.1 198283796 6877669 complement(1651051..1652235) 1 NC_011206.1 KEGG: bpd:BURPS668_1188 phosphoribosylglycinamide formyltransferase 2; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide formyltransferase 2 1652235 6877669 Lferr_1688 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylglycinamide formyltransferase 2 YP_002220117.1 1651051 R 380394 CDS YP_002220118.1 198283797 6877670 1652335..1653255 1 NC_011206.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 1653255 6877670 Lferr_1689 Acidithiobacillus ferrooxidans ATCC 53993 6-phosphogluconate dehydrogenase YP_002220118.1 1652335 D 380394 CDS YP_002220119.1 198283798 6877671 1653256..1654719 1 NC_011206.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1654719 6877671 Lferr_1690 Acidithiobacillus ferrooxidans ATCC 53993 glucose-6-phosphate 1-dehydrogenase YP_002220119.1 1653256 D 380394 CDS YP_002220120.1 198283799 6877672 1654988..1655281 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: azo:azo2809 putative transcriptional activator, ArsR family; arsR family transcriptional regulator 1655281 6877672 Lferr_1691 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002220120.1 1654988 D 380394 CDS YP_002220121.1 198283800 6877673 complement(1655284..1656261) 1 NC_011206.1 PFAM: dihydrouridine synthase DuS; KEGG: mpt:Mpe_A1916 tRNA-dihydrouridine synthase A; dihydrouridine synthase 1656261 6877673 Lferr_1692 Acidithiobacillus ferrooxidans ATCC 53993 dihydrouridine synthase YP_002220121.1 1655284 R 380394 CDS YP_002220122.1 198283801 6877674 complement(1656314..1658719) 1 NC_011206.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1658719 6877674 Lferr_1693 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase IV subunit A YP_002220122.1 1656314 R 380394 CDS YP_002220123.1 198283802 6877675 complement(1658737..1660707) 1 NC_011206.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1660707 6877675 Lferr_1694 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase IV subunit B YP_002220123.1 1658737 R 380394 CDS YP_002220124.1 198283803 6877676 complement(1660996..1662303) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cte:CT0195 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 1662303 6877676 Lferr_1695 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002220124.1 1660996 R 380394 CDS YP_002220125.1 198283804 6877677 complement(1662300..1662962) 1 NC_011206.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cte:CT0194 DNA-binding response regulator; winged helix family two component transcriptional regulator 1662962 6877677 Lferr_1696 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220125.1 1662300 R 380394 CDS YP_002220126.1 198283805 6877678 complement(1663040..1663351) 1 NC_011206.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: mfa:Mfla_1052 propeptide, PepSY amd peptidase M4; propeptide PepSY amd peptidase M4 1663351 6877678 Lferr_1697 Acidithiobacillus ferrooxidans ATCC 53993 propeptide PepSY amd peptidase M4 YP_002220126.1 1663040 R 380394 CDS YP_002220127.1 198283806 6877679 complement(1663547..1664623) 1 NC_011206.1 KEGG: bpd:BURPS668_A0079 hypothetical protein; hypothetical protein 1664623 6877679 Lferr_1698 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220127.1 1663547 R 380394 CDS YP_002220128.1 198283807 6877680 complement(1664666..1667692) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA1935 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1667692 6877680 Lferr_1699 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002220128.1 1664666 R 380394 CDS YP_002220129.1 198283808 6877681 complement(1667692..1668732) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mca:MCA1936 transporter, putative; RND family efflux transporter MFP subunit 1668732 6877681 Lferr_1700 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220129.1 1667692 R 380394 CDS YP_002220130.1 198283809 6877682 complement(1668729..1670078) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: mca:MCA1937 outer membrane efflux protein; outer membrane efflux protein 1670078 6877682 Lferr_1701 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220130.1 1668729 R 380394 CDS YP_002220131.1 198283810 6877683 complement(1670800..1673163) 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_0295 TonB-dependent receptor; TonB-dependent receptor 1673163 6877683 Lferr_1702 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220131.1 1670800 R 380394 CDS YP_002220132.1 198283811 6877684 complement(1673391..1674341) 1 NC_011206.1 hypothetical protein 1674341 6877684 Lferr_1703 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220132.1 1673391 R 380394 CDS YP_002220133.1 198283812 6877685 complement(1674471..1677569) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA1935 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1677569 6877685 Lferr_1704 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002220133.1 1674471 R 380394 CDS YP_002220134.1 198283813 6877686 complement(1677566..1678576) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bpd:BURPS668_A1580 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1678576 6877686 Lferr_1705 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220134.1 1677566 R 380394 CDS YP_002220135.1 198283814 6877687 complement(1678573..1679916) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_2969 outer membrane efflux protein; outer membrane efflux protein 1679916 6877687 Lferr_1706 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220135.1 1678573 R 380394 CDS YP_002220136.1 198283815 6877688 complement(1680112..1680423) 1 NC_011206.1 KEGG: mca:MCA2708 ATP synthase F1, gamma subunit; ATP synthase F1 subunit gamma 1680423 6877688 Lferr_1707 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F1 subunit gamma YP_002220136.1 1680112 R 380394 CDS YP_002220137.1 198283816 6877689 complement(1680416..1680658) 1 NC_011206.1 KEGG: mca:MCA1556 F0F1 ATP synthase subunit beta; hypothetical protein 1680658 6877689 Lferr_1708 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220137.1 1680416 R 380394 CDS YP_002220138.1 198283817 6877690 1680873..1681070 1 NC_011206.1 hypothetical protein 1681070 6877690 Lferr_1709 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220138.1 1680873 D 380394 CDS YP_002220139.1 198283818 6877691 1681126..1681542 1 NC_011206.1 KEGG: gsu:GSU0710 hypothetical protein; hypothetical protein 1681542 6877691 Lferr_1710 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220139.1 1681126 D 380394 CDS YP_002220140.1 198283819 6877692 1681715..1682764 1 NC_011206.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE2274 hypothetical protein; hypothetical protein 1682764 6877692 Lferr_1711 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220140.1 1681715 D 380394 CDS YP_002220141.1 198283820 6877693 1682860..1685307 1 NC_011206.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: acr:Acry_3376 phosphoketolase; phosphoketolase 1685307 6877693 Lferr_1712 Acidithiobacillus ferrooxidans ATCC 53993 phosphoketolase YP_002220141.1 1682860 D 380394 CDS YP_002220142.1 198283821 6877694 1685394..1686176 1 NC_011206.1 KEGG: yps:YPTB0838 hypothetical protein; salt-induced outer membrane protein 1686176 6877694 Lferr_1713 Acidithiobacillus ferrooxidans ATCC 53993 salt-induced outer membrane protein YP_002220142.1 1685394 D 380394 CDS YP_002220143.1 198283822 6877696 complement(1686423..1687373) 1 NC_011206.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: aeh:Mlg_1219 preprotein translocase subunit SecF; protein-export membrane protein SecF 1687373 6877696 Lferr_1714 Acidithiobacillus ferrooxidans ATCC 53993 protein-export membrane protein SecF YP_002220143.1 1686423 R 380394 CDS YP_002220144.1 198283823 6877697 complement(1687381..1689165) 1 NC_011206.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mfa:Mfla_0512 protein-export membrane protein SecD; protein-export membrane protein SecD 1689165 6877697 Lferr_1715 Acidithiobacillus ferrooxidans ATCC 53993 protein-export membrane protein SecD YP_002220144.1 1687381 R 380394 CDS YP_002220145.1 198283824 6877698 complement(1689177..1689512) 1 NC_011206.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: eba:ebB40 preprotein translocase subunit YajC; preprotein translocase subunit YajC 1689512 6877698 Lferr_1716 Acidithiobacillus ferrooxidans ATCC 53993 preprotein translocase subunit YajC YP_002220145.1 1689177 R 380394 CDS YP_002220146.1 198283825 6877699 complement(1689553..1690668) 1 NC_011206.1 KEGG: mca:MCA0681 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1690668 6877699 Lferr_1717 Acidithiobacillus ferrooxidans ATCC 53993 queuine tRNA-ribosyltransferase YP_002220146.1 1689553 R 380394 CDS YP_002220147.1 198283826 6877700 complement(1690665..1691702) 1 NC_011206.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1691702 queA 6877700 queA Acidithiobacillus ferrooxidans ATCC 53993 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002220147.1 1690665 R 380394 CDS YP_002220148.1 198283827 6877701 complement(1691711..1693060) 1 NC_011206.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bvi:Bcep1808_4227 protein of unknown function DUF21; hypothetical protein 1693060 6877701 Lferr_1719 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220148.1 1691711 R 380394 CDS YP_002220149.1 198283828 6877702 complement(1693075..1693668) 1 NC_011206.1 PFAM: CBS domain containing protein; KEGG: noc:Noc_0102 CBS domain containing protein; signal-transduction protein with CBS domains 1693668 6877702 Lferr_1720 Acidithiobacillus ferrooxidans ATCC 53993 signal-transduction protein with CBS domains YP_002220149.1 1693075 R 380394 CDS YP_002220150.1 198283829 6877703 complement(1693731..1694945) 1 NC_011206.1 KEGG: neu:NE0700 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase 1694945 6877703 Lferr_1721 Acidithiobacillus ferrooxidans ATCC 53993 O-succinylhomoserine sulfhydrylase YP_002220150.1 1693731 R 380394 CDS YP_002220151.1 198283830 6877704 complement(1694942..1696387) 1 NC_011206.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: mgm:Mmc1_0265 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1696387 6877704 Lferr_1722 Acidithiobacillus ferrooxidans ATCC 53993 amidophosphoribosyltransferase YP_002220151.1 1694942 R 380394 CDS YP_002220152.1 198283831 6877705 complement(1696377..1696874) 1 NC_011206.1 PFAM: Colicin V production protein; KEGG: noc:Noc_1672 colicin V production protein; colicin V production protein 1696874 6877705 Lferr_1723 Acidithiobacillus ferrooxidans ATCC 53993 colicin V production protein YP_002220152.1 1696377 R 380394 CDS YP_002220153.1 198283832 6877706 complement(1696871..1698160) 1 NC_011206.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: tbd:Tbd_1911 folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1698160 6877706 Lferr_1724 Acidithiobacillus ferrooxidans ATCC 53993 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_002220153.1 1696871 R 380394 CDS YP_002220154.1 198283833 6877707 complement(1698189..1699073) 1 NC_011206.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: aeh:Mlg_1238 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1699073 6877707 Lferr_1725 Acidithiobacillus ferrooxidans ATCC 53993 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_002220154.1 1698189 R 380394 CDS YP_002220155.1 198283834 6877708 complement(1699070..1699888) 1 NC_011206.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1699888 trpA 6877708 trpA Acidithiobacillus ferrooxidans ATCC 53993 tryptophan synthase subunit alpha YP_002220155.1 1699070 R 380394 CDS YP_002220156.1 198283835 6877709 complement(1699885..1701084) 1 NC_011206.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1701084 6877709 Lferr_1727 Acidithiobacillus ferrooxidans ATCC 53993 tryptophan synthase subunit beta YP_002220156.1 1699885 R 380394 CDS YP_002220157.1 198283836 6877710 complement(1701095..1701706) 1 NC_011206.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: pst:PSPTO_3816 N-(5'phosphoribosyl)anthranilate isomerase; phosphoribosylanthranilate isomerase 1701706 6877710 Lferr_1728 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylanthranilate isomerase YP_002220157.1 1701095 R 380394 CDS YP_002220158.1 198283837 6877711 complement(1701767..1702582) 1 NC_011206.1 KEGG: psb:Psyr_1662 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 1702582 6877711 Lferr_1729 Acidithiobacillus ferrooxidans ATCC 53993 tRNA pseudouridine synthase A YP_002220158.1 1701767 R 380394 CDS YP_002220159.1 198283838 6877712 complement(1702595..1704790) 1 NC_011206.1 KEGG: cvi:CV_2766 probable transmembrane protein; Tfp pilus assembly protein FimV-like protein 1704790 6877712 Lferr_1730 Acidithiobacillus ferrooxidans ATCC 53993 Tfp pilus assembly protein FimV-like protein YP_002220159.1 1702595 R 380394 CDS YP_002220160.1 198283839 6877713 complement(1704854..1705876) 1 NC_011206.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: mca:MCA2062 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1705876 6877713 Lferr_1731 Acidithiobacillus ferrooxidans ATCC 53993 aspartate-semialdehyde dehydrogenase YP_002220160.1 1704854 R 380394 CDS YP_002220161.1 198283840 6877714 complement(1705884..1706960) 1 NC_011206.1 KEGG: hch:HCH_02430 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1706960 6877714 Lferr_1732 Acidithiobacillus ferrooxidans ATCC 53993 3-isopropylmalate dehydrogenase YP_002220161.1 1705884 R 380394 CDS YP_002220162.1 198283841 6877715 1707062..1707676 1 NC_011206.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: eba:ebA2945 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1707676 6877715 Lferr_1733 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002220162.1 1707062 D 380394 CDS YP_002220163.1 198283842 6877716 1707673..1708167 1 NC_011206.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: cvi:CV_2533 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B 1708167 6877716 Lferr_1734 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin-guanine dinucleotide biosynthesis protein B YP_002220163.1 1707673 D 380394 CDS YP_002220164.1 198283843 6877717 1708170..1709411 1 NC_011206.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: azo:azo2825 molybdopterin biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 1709411 6877717 Lferr_1735 Acidithiobacillus ferrooxidans ATCC 53993 molybdenum cofactor synthesis domain-containing protein YP_002220164.1 1708170 D 380394 CDS YP_002220165.1 198283844 6877718 complement(1709420..1710061) 1 NC_011206.1 KEGG: mag:amb2051 phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthase and related enzyme; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein 1710061 6877718 Lferr_1736 Acidithiobacillus ferrooxidans ATCC 53993 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein YP_002220165.1 1709420 R 380394 CDS YP_002220166.1 198283845 6877719 complement(1710151..1711968) 1 NC_011206.1 KEGG: xft:PD2043 protease IV; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 67K type 1711968 6877719 Lferr_1737 Acidithiobacillus ferrooxidans ATCC 53993 signal peptide peptidase SppA, 67K type YP_002220166.1 1710151 R 380394 CDS YP_002220167.1 198283846 6877720 complement(1712176..1715085) 1 NC_011206.1 KEGG: noc:Noc_1680 (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 1715085 6877720 Lferr_1738 Acidithiobacillus ferrooxidans ATCC 53993 malto-oligosyltrehalose synthase YP_002220167.1 1712176 R 380394 CDS YP_002220168.1 198283847 6877721 complement(1715091..1716947) 1 NC_011206.1 KEGG: rxy:Rxyl_0318 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 1716947 6877721 Lferr_1739 Acidithiobacillus ferrooxidans ATCC 53993 malto-oligosyltrehalose trehalohydrolase YP_002220168.1 1715091 R 380394 CDS YP_002220169.1 198283848 6877722 complement(1716968..1718203) 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2348 glycosyl transferase, group 1; group 1 glycosyl transferase 1718203 6877722 Lferr_1740 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002220169.1 1716968 R 380394 CDS YP_002220170.1 198283849 6877723 complement(1718193..1718885) 1 NC_011206.1 KEGG: pca:Pcar_3110 hypothetical protein; hypothetical protein 1718885 6877723 Lferr_1741 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220170.1 1718193 R 380394 CDS YP_002220171.1 198283850 6877724 complement(1719204..1719845) 1 NC_011206.1 KEGG: gur:Gura_0964 dienelactone hydrolase; dienelactone hydrolase 1719845 6877724 Lferr_1742 Acidithiobacillus ferrooxidans ATCC 53993 dienelactone hydrolase YP_002220171.1 1719204 R 380394 CDS YP_002220172.1 198283851 6877725 complement(1720007..1720444) 1 NC_011206.1 PFAM: heat shock protein Hsp20; KEGG: dps:DP1866 similar to low molecular weight heat shock protein (HSP17); heat shock protein Hsp20 1720444 6877725 Lferr_1743 Acidithiobacillus ferrooxidans ATCC 53993 heat shock protein Hsp20 YP_002220172.1 1720007 R 380394 CDS YP_002220173.1 198283852 6877726 1720783..1721790 1 NC_011206.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_0456 alcohol dehydrogenase, zinc-containing; zinc-binding alcohol dehydrogenase family protein 1721790 6877726 Lferr_1744 Acidithiobacillus ferrooxidans ATCC 53993 zinc-binding alcohol dehydrogenase family protein YP_002220173.1 1720783 D 380394 CDS YP_002220174.1 198283853 6877727 1722006..1722569 1 NC_011206.1 KEGG: cau:Caur_0730 ErfK/YbiS/YcfS/YnhG family protein; hypothetical protein 1722569 6877727 Lferr_1745 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220174.1 1722006 D 380394 CDS YP_002220175.1 198283854 6877728 1722892..1723833 1 NC_011206.1 PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: noc:Noc_1572 peptidase M48, Ste24p; peptidase M48 Ste24p 1723833 6877728 Lferr_1746 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M48 Ste24p YP_002220175.1 1722892 D 380394 CDS YP_002220176.1 198283855 6877729 1723938..1725467 1 NC_011206.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spl:Spea_2190 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 1725467 6877729 Lferr_1747 Acidithiobacillus ferrooxidans ATCC 53993 EmrB/QacA subfamily drug resistance transporter YP_002220176.1 1723938 D 380394 CDS YP_002220177.1 198283856 6877730 complement(1725420..1725686) 1 NC_011206.1 hypothetical protein 1725686 6877730 Lferr_1748 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220177.1 1725420 R 380394 CDS YP_002220178.1 198283857 6877731 complement(1725838..1726704) 1 NC_011206.1 KEGG: mpt:Mpe_B0470 hypothetical protein; hypothetical protein 1726704 6877731 Lferr_1749 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220178.1 1725838 R 380394 CDS YP_002220179.1 198283858 6877732 complement(1726650..1726970) 1 NC_011206.1 KEGG: bxe:Bxe_C1199 hypothetical protein; hypothetical protein 1726970 6877732 Lferr_1750 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220179.1 1726650 R 380394 CDS YP_002220180.1 198283859 6877734 1728132..1728998 1 NC_011206.1 hypothetical protein 1728998 6877734 Lferr_1752 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220180.1 1728132 D 380394 CDS YP_002220181.1 198283860 6877735 1729100..1730404 1 NC_011206.1 PFAM: protein of unknown function DUF181; KEGG: btl:BALH_0477 hypothetical protein; hypothetical protein 1730404 6877735 Lferr_1753 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220181.1 1729100 D 380394 CDS YP_002220182.1 198283861 6877736 1730935..1731267 1 NC_011206.1 KEGG: bpt:Bpet1150 hypothetical protein; hypothetical protein 1731267 6877736 Lferr_1754 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220182.1 1730935 D 380394 CDS YP_002220183.1 198283862 6877737 1731258..1731605 1 NC_011206.1 PFAM: IS66 Orf2 family protein; KEGG: bte:BTH_I2736 TnpB protein; IS66 Orf2 family protein 1731605 6877737 Lferr_1755 Acidithiobacillus ferrooxidans ATCC 53993 IS66 Orf2 family protein YP_002220183.1 1731258 D 380394 CDS YP_002220184.1 198283863 6877738 1731655..1733292 1 NC_011206.1 PFAM: transposase IS66; KEGG: bte:BTH_I1449 TnpC protein; transposase IS66 1733292 6877738 Lferr_1756 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS66 YP_002220184.1 1731655 D 380394 CDS YP_002220185.1 198283864 6877739 1733782..1734432 1 NC_011206.1 hypothetical protein 1734432 6877739 Lferr_1757 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220185.1 1733782 D 380394 CDS YP_002220186.1 198283865 6877740 1734449..1735030 1 NC_011206.1 KEGG: syw:SYNW0079 hypothetical protein; hypothetical protein 1735030 6877740 Lferr_1758 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220186.1 1734449 D 380394 CDS YP_002220187.1 198283866 6877741 1735364..1737580 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: gur:Gura_3178 hypothetical protein; outer membrane efflux protein 1737580 6877741 Lferr_1759 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220187.1 1735364 D 380394 CDS YP_002220188.1 198283867 6877742 1737577..1738674 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: acr:Acry_0135 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1738674 6877742 Lferr_1760 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220188.1 1737577 D 380394 CDS YP_002220189.1 198283868 6877743 1738671..1741775 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: tbd:Tbd_2319 probable RND efflux transporter; acriflavin resistance protein 1741775 6877743 Lferr_1761 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002220189.1 1738671 D 380394 CDS YP_002220190.1 198283869 6877744 1741801..1742520 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmo:Pmob_0278 ABC transporter related; ABC transporter-like protein 1742520 6877744 Lferr_1762 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220190.1 1741801 D 380394 CDS YP_002220191.1 198283870 6877745 1742513..1743238 1 NC_011206.1 KEGG: rsa:RSal33209_2914 ABC transporter permease protein; hypothetical protein 1743238 6877745 Lferr_1763 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220191.1 1742513 D 380394 CDS YP_002220192.1 198283871 6877746 1743281..1743664 1 NC_011206.1 KEGG: bca:BCE_5484 ABC transporter, permease protein, putative; hypothetical protein 1743664 6877746 Lferr_1764 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220192.1 1743281 D 380394 CDS YP_002220193.1 198283872 6877747 1743719..1745038 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 1745038 6877747 Lferr_1765 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220193.1 1743719 D 380394 CDS YP_002220194.1 198283873 6877748 1745160..1745474 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 1745474 6877748 Lferr_1766 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220194.1 1745160 D 380394 CDS YP_002220195.1 198283874 6877749 1745618..1746052 1 NC_011206.1 KEGG: erg:ERGA_CDS_05170 cytochrome b; hypothetical protein 1746052 6877749 Lferr_1767 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220195.1 1745618 D 380394 CDS YP_002220196.1 198283875 6877750 1746716..1747267 1 NC_011206.1 KEGG: tbd:Tbd_0976 hypothetical protein; hypothetical protein 1747267 6877750 Lferr_1768 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220196.1 1746716 D 380394 CDS YP_002220197.1 198283876 6877751 complement(1747344..1748780) 1 NC_011206.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: aeh:Mlg_0166 aspartyl/glutamyl-tRNA amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase subunit B 1748780 6877751 Lferr_1769 Acidithiobacillus ferrooxidans ATCC 53993 glutamyl-tRNA(Gln) amidotransferase subunit B YP_002220197.1 1747344 R 380394 CDS YP_002220198.1 198283877 6877752 complement(1748777..1750249) 1 NC_011206.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1750249 gatA 6877752 gatA Acidithiobacillus ferrooxidans ATCC 53993 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002220198.1 1748777 R 380394 CDS YP_002220199.1 198283878 6877753 complement(1750259..1750546) 1 NC_011206.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: ppw:PputW619_4283 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 1750546 6877753 Lferr_1771 Acidithiobacillus ferrooxidans ATCC 53993 glutamyl-tRNA(Gln) amidotransferase subunit C YP_002220199.1 1750259 R 380394 CDS YP_002220200.1 198283879 6877754 complement(1750549..1751391) 1 NC_011206.1 PFAM: VacJ family lipoprotein; KEGG: bte:BTH_I3001 lipoprotein VacJ; VacJ family lipoprotein 1751391 6877754 Lferr_1772 Acidithiobacillus ferrooxidans ATCC 53993 VacJ family lipoprotein YP_002220200.1 1750549 R 380394 CDS YP_002220201.1 198283880 6877755 complement(1751391..1752050) 1 NC_011206.1 TIGRFAM: hopanoid biosynthesis associated membrane protein HpnM; PFAM: toluene tolerance family protein; KEGG: mca:MCA0806 hypothetical protein; hopanoid biosynthesis associated membrane protein HpnM 1752050 6877755 Lferr_1773 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated membrane protein HpnM YP_002220201.1 1751391 R 380394 CDS YP_002220202.1 198283881 6877756 complement(1752095..1753198) 1 NC_011206.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: net:Neut_1576 radical SAM domain protein; hopanoid biosynthesis associated radical SAM protein HpnH 1753198 6877756 Lferr_1774 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated radical SAM protein HpnH YP_002220202.1 1752095 R 380394 CDS YP_002220203.1 198283882 6877757 complement(1753304..1754146) 1 NC_011206.1 KEGG: acr:Acry_0244 hypothetical protein; hypothetical protein 1754146 6877757 Lferr_1775 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220203.1 1753304 R 380394 CDS YP_002220204.1 198283883 6877758 complement(1754143..1755174) 1 NC_011206.1 TIGRFAM: membrane protein; KEGG: reu:Reut_B4903 hypothetical protein; hypothetical protein 1755174 6877758 Lferr_1776 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220204.1 1754143 R 380394 CDS YP_002220205.1 198283884 6877759 complement(1755161..1757863) 1 NC_011206.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: rru:Rru_A0057 hypothetical protein; hopanoid biosynthesis associated RND transporter-like protein HpnN 1757863 6877759 Lferr_1777 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated RND transporter-like protein HpnN YP_002220205.1 1755161 R 380394 CDS YP_002220206.1 198283885 6877760 complement(1757844..1758719) 1 NC_011206.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: gbe:GbCGDNIH1_2400 cellobiose phosphotransferase system CelC; hopanoid biosynthesis associated protein HpnK 1758719 6877760 Lferr_1778 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated protein HpnK YP_002220206.1 1757844 R 380394 CDS YP_002220207.1 198283886 6877761 complement(1758721..1760151) 1 NC_011206.1 KEGG: gox:GOX0614 putative methyltransferase; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnJ 1760151 6877761 Lferr_1779 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated radical SAM protein HpnJ YP_002220207.1 1758721 R 380394 CDS YP_002220208.1 198283887 6877762 complement(1760148..1761308) 1 NC_011206.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_3407 glycosyl transferase, family 2; hopanoid biosynthesis associated glycosyl transferase protein HpnI 1761308 6877762 Lferr_1780 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid biosynthesis associated glycosyl transferase protein HpnI YP_002220208.1 1760148 R 380394 CDS YP_002220209.1 198283888 6877763 complement(1761351..1762340) 1 NC_011206.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: mag:amb1364 nucleoside-diphosphate-sugar epimerase; hopanoid-associated sugar epimerase 1762340 6877763 Lferr_1781 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid-associated sugar epimerase YP_002220209.1 1761351 R 380394 CDS YP_002220210.1 198283889 6877764 complement(1762337..1763050) 1 NC_011206.1 TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: mca:MCA0811 phosphorylase family protein; hopanoid-associated phosphorylase 1763050 6877764 Lferr_1782 Acidithiobacillus ferrooxidans ATCC 53993 hopanoid-associated phosphorylase YP_002220210.1 1762337 R 380394 CDS YP_002220211.1 198283890 6877765 complement(1763032..1764963) 1 NC_011206.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: noc:Noc_1320 terpene synthase/squalene cyclase; squalene-hopene cyclase 1764963 6877765 Lferr_1783 Acidithiobacillus ferrooxidans ATCC 53993 squalene-hopene cyclase YP_002220211.1 1763032 R 380394 CDS YP_002220212.1 198283891 6877766 complement(1764960..1766165) 1 NC_011206.1 PFAM: Squalene/phytoene synthase; KEGG: neu:NE1958 squalene and phytoene synthase; squalene synthase 1766165 6877766 Lferr_1784 Acidithiobacillus ferrooxidans ATCC 53993 squalene synthase YP_002220212.1 1764960 R 380394 CDS YP_002220213.1 198283892 6877767 complement(1766162..1767196) 1 NC_011206.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1767196 gpsA 6877767 gpsA Acidithiobacillus ferrooxidans ATCC 53993 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002220213.1 1766162 R 380394 CDS YP_002220214.1 198283893 6877768 complement(1767200..1767649) 1 NC_011206.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: dar:Daro_0613 preprotein translocase subunit SecB; protein-export protein SecB 1767649 6877768 Lferr_1786 Acidithiobacillus ferrooxidans ATCC 53993 protein-export protein SecB YP_002220214.1 1767200 R 380394 CDS YP_002220215.1 198283894 6877770 complement(1768026..1768361) 1 NC_011206.1 hypothetical protein 1768361 6877770 Lferr_1787 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220215.1 1768026 R 380394 CDS YP_002220216.1 198283895 6877771 complement(1768380..1768790) 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: pen:PSEEN4876 nucleic acid binding protein, PIN domain; PilT protein domain-containing protein 1768790 6877771 Lferr_1788 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002220216.1 1768380 R 380394 CDS YP_002220217.1 198283896 6877772 complement(1768787..1769017) 1 NC_011206.1 KEGG: pst:PSPTO_1046 virulence-associated protein, putative; virulence-associated protein 1769017 6877772 Lferr_1789 Acidithiobacillus ferrooxidans ATCC 53993 virulence-associated protein YP_002220217.1 1768787 R 380394 CDS YP_002220218.1 198283897 6877773 complement(1769320..1770840) 1 NC_011206.1 PFAM: Aldehyde Dehydrogenase_; KEGG: hch:HCH_01852 NAD-dependent aldehyde dehydrogenase; aldehyde dehydrogenase 1770840 6877773 Lferr_1790 Acidithiobacillus ferrooxidans ATCC 53993 aldehyde dehydrogenase YP_002220218.1 1769320 R 380394 CDS YP_002220219.1 198283898 6877774 1771143..1772855 1 NC_011206.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: hha:Hhal_0701 prolyl-tRNA synthetase; prolyl-tRNA synthetase 1772855 6877774 Lferr_1791 Acidithiobacillus ferrooxidans ATCC 53993 prolyl-tRNA synthetase YP_002220219.1 1771143 D 380394 CDS YP_002220220.1 198283899 6877775 1772848..1773324 1 NC_011206.1 PFAM: UspA domain protein; KEGG: afw:Anae109_2436 UspA domain protein; UspA domain-containing protein 1773324 6877775 Lferr_1792 Acidithiobacillus ferrooxidans ATCC 53993 UspA domain-containing protein YP_002220220.1 1772848 D 380394 CDS YP_002220221.1 198283900 6877776 complement(1773337..1774002) 1 NC_011206.1 KEGG: bte:BTH_I0376 hypothetical protein; hypothetical protein 1774002 6877776 Lferr_1793 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220221.1 1773337 R 380394 CDS YP_002220222.1 198283901 6877777 complement(1774007..1774945) 1 NC_011206.1 PFAM: Mammalian cell entry related domain protein; KEGG: bmu:Bmul_0405 mammalian cell entry related domain protein; mammalian cell entry domain-containing protein 1774945 6877777 Lferr_1794 Acidithiobacillus ferrooxidans ATCC 53993 mammalian cell entry domain-containing protein YP_002220222.1 1774007 R 380394 CDS YP_002220223.1 198283902 6877778 1775097..1775750 1 NC_011206.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: tbd:Tbd_2695 putative protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1775750 6877778 Lferr_1795 Acidithiobacillus ferrooxidans ATCC 53993 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002220223.1 1775097 D 380394 CDS YP_002220224.1 198283903 6877779 1775757..1776302 1 NC_011206.1 PFAM: isochorismatase hydrolase; KEGG: mag:amb1386 amidase related to nicotinamidase; isochorismatase hydrolase 1776302 6877779 Lferr_1796 Acidithiobacillus ferrooxidans ATCC 53993 isochorismatase hydrolase YP_002220224.1 1775757 D 380394 CDS YP_002220225.1 198283904 6877780 1776313..1778136 1 NC_011206.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: noc:Noc_1493 peptidase M61; peptidase M61 domain-containing protein 1778136 6877780 Lferr_1797 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M61 domain-containing protein YP_002220225.1 1776313 D 380394 CDS YP_002220226.1 198283905 6877781 complement(1778139..1778942) 1 NC_011206.1 PFAM: metallophosphoesterase; KEGG: mta:Moth_1083 hypothetical protein; metallophosphoesterase 1778942 6877781 Lferr_1798 Acidithiobacillus ferrooxidans ATCC 53993 metallophosphoesterase YP_002220226.1 1778139 R 380394 CDS YP_002220227.1 198283906 6877782 complement(1778939..1779466) 1 NC_011206.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: tbd:Tbd_2724 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase 1779466 6877782 Lferr_1799 Acidithiobacillus ferrooxidans ATCC 53993 5-formyltetrahydrofolate cyclo-ligase YP_002220227.1 1778939 R 380394 CDS YP_002220228.1 198283907 6877784 complement(1779745..1780059) 1 NC_011206.1 PFAM: protein of unknown function DUF710; KEGG: reh:H16_A2974 hypothetical protein; hypothetical protein 1780059 6877784 Lferr_1800 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220228.1 1779745 R 380394 CDS YP_002220229.1 198283908 6877785 complement(1780087..1780323) 1 NC_011206.1 hypothetical protein 1780323 6877785 Lferr_1801 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220229.1 1780087 R 380394 CDS YP_002220230.1 198283909 6877786 1780411..1782321 1 NC_011206.1 KEGG: mca:MCA0103 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 1782321 6877786 Lferr_1802 Acidithiobacillus ferrooxidans ATCC 53993 penicillin-binding protein 2 YP_002220230.1 1780411 D 380394 CDS YP_002220231.1 198283910 6877787 1782334..1782942 1 NC_011206.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: pmy:Pmen_1054 50S ribosomal protein L25/general stress protein Ctc; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 1782942 6877787 Lferr_1803 Acidithiobacillus ferrooxidans ATCC 53993 ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 YP_002220231.1 1782334 D 380394 CDS YP_002220232.1 198283911 6877788 1782949..1783518 1 NC_011206.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1783518 6877788 Lferr_1804 Acidithiobacillus ferrooxidans ATCC 53993 peptidyl-tRNA hydrolase YP_002220232.1 1782949 D 380394 CDS YP_002220233.1 198283912 6877789 1783528..1784619 1 NC_011206.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: mms:mma_3131 hypothetical protein; GTP-binding protein YchF 1784619 6877789 Lferr_1805 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein YchF YP_002220233.1 1783528 D 380394 CDS YP_002220234.1 198283913 6877790 1784677..1785222 1 NC_011206.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_2153 cupin 2 conserved barrel domain protein; XRE family transcriptional regulator 1785222 6877790 Lferr_1806 Acidithiobacillus ferrooxidans ATCC 53993 XRE family transcriptional regulator YP_002220234.1 1784677 D 380394 CDS YP_002220235.1 198283914 6877791 1785219..1787201 1 NC_011206.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rfr:Rfer_3292 hydrogenase 4 subunit B; hydrogenase 4 subunit B 1787201 6877791 Lferr_1807 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase 4 subunit B YP_002220235.1 1785219 D 380394 CDS YP_002220236.1 198283915 6877792 1787198..1788139 1 NC_011206.1 KEGG: eba:ebA4192 formate hydrogenlyase membrane subunit subunit HyfD; formate hydrogenlyase membrane subunit HyfD 1788139 6877792 Lferr_1808 Acidithiobacillus ferrooxidans ATCC 53993 formate hydrogenlyase membrane subunit HyfD YP_002220236.1 1787198 D 380394 CDS YP_002220237.1 198283916 6877793 1788141..1788818 1 NC_011206.1 KEGG: eba:ebA4191 hydrogenase 4 membrane component; hydrogenase 4 membrane component 1788818 6877793 Lferr_1809 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase 4 membrane component YP_002220237.1 1788141 D 380394 CDS YP_002220238.1 198283917 6877794 1788818..1790272 1 NC_011206.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eba:ebA4190 hydrogenase 4 subunit F; hydrogenase 4 subunit F 1790272 6877794 Lferr_1810 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase 4 subunit F YP_002220238.1 1788818 D 380394 CDS YP_002220239.1 198283918 6877795 1790283..1791830 1 NC_011206.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: eba:ebA4187 subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenase; NADH-ubiquinone oxidoreductase chain 49kDa 1791830 6877795 Lferr_1811 Acidithiobacillus ferrooxidans ATCC 53993 NADH-ubiquinone oxidoreductase chain 49kDa YP_002220239.1 1790283 D 380394 CDS YP_002220240.1 198283919 6877796 1791867..1792364 1 NC_011206.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: reh:H16_A2201 formate hydrogenlyase subunit 7; NADH ubiquinone oxidoreductase 20 kDa subunit 1792364 6877796 Lferr_1812 Acidithiobacillus ferrooxidans ATCC 53993 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002220240.1 1791867 D 380394 CDS YP_002220241.1 198283920 6877797 1792418..1792657 1 NC_011206.1 hypothetical protein 1792657 6877797 Lferr_1813 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220241.1 1792418 D 380394 CDS YP_002220242.1 198283921 6877798 1792621..1794000 1 NC_011206.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 1794000 6877798 Lferr_1814 Acidithiobacillus ferrooxidans ATCC 53993 ribulose bisphosphate carboxylase YP_002220242.1 1792621 D 380394 CDS YP_002220243.1 198283922 6877799 1794150..1794968 1 NC_011206.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: tbd:Tbd_2637 rubisco activation protein CbbQ; CbbQ/NirQ/NorQ domain-containing protein 1794968 6877799 Lferr_1815 Acidithiobacillus ferrooxidans ATCC 53993 CbbQ/NirQ/NorQ domain-containing protein YP_002220243.1 1794150 D 380394 CDS YP_002220244.1 198283923 6877800 1794987..1797266 1 NC_011206.1 PFAM: von Willebrand factor type A; KEGG: tbd:Tbd_2636 rubisco activation protein CbbO; hypothetical protein 1797266 6877800 Lferr_1816 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220244.1 1794987 D 380394 CDS YP_002220245.1 198283924 6877801 complement(1797273..1798184) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hha:Hhal_1047 transcriptional regulator, LysR family; LysR family transcriptional regulator 1798184 6877801 Lferr_1817 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002220245.1 1797273 R 380394 CDS YP_002220246.1 198283925 6877802 complement(1798181..1798522) 1 NC_011206.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bcz:pE33L466_0444 alkylphosphonate uptake protein; alkylphosphonate utilization operon protein PhnA 1798522 6877802 Lferr_1818 Acidithiobacillus ferrooxidans ATCC 53993 alkylphosphonate utilization operon protein PhnA YP_002220246.1 1798181 R 380394 CDS YP_002220247.1 198283926 6877803 complement(1798536..1799243) 1 NC_011206.1 KEGG: eba:ebA4197 putative transferase; transferase 1799243 6877803 Lferr_1819 Acidithiobacillus ferrooxidans ATCC 53993 transferase YP_002220247.1 1798536 R 380394 CDS YP_002220248.1 198283927 6877804 1799476..1801341 1 NC_011206.1 KEGG: xfa:XF1451 hypothetical protein; hypothetical protein 1801341 6877804 Lferr_1820 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220248.1 1799476 D 380394 CDS YP_002220249.1 198283928 6877805 1801338..1801451 1 NC_011206.1 hypothetical protein 1801451 6877805 Lferr_1821 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220249.1 1801338 D 380394 CDS YP_002220250.1 198283929 6877806 1801602..1801904 1 NC_011206.1 hypothetical protein 1801904 6877806 Lferr_1822 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220250.1 1801602 D 380394 CDS YP_002220251.1 198283930 6877807 1802028..1802615 1 NC_011206.1 hypothetical protein 1802615 6877807 Lferr_1823 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220251.1 1802028 D 380394 CDS YP_002220252.1 198283931 6877808 1803379..1803912 1 NC_011206.1 hypothetical protein 1803912 6877808 Lferr_1824 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220252.1 1803379 D 380394 CDS YP_002220253.1 198283932 6877809 1804056..1805429 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_C1144 ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily; secretion protein HlyD family protein 1805429 6877809 Lferr_1825 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002220253.1 1804056 D 380394 CDS YP_002220254.1 198283933 6877810 1805426..1807597 1 NC_011206.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_C1143 ABC antibiotic efflux pump, fused ATPase and inner membrane subunits and peptidase; ABC transporter-like protein 1807597 6877810 Lferr_1826 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220254.1 1805426 D 380394 CDS YP_002220255.1 198283934 6877811 1807632..1809122 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: bte:BTH_I2950 type I secretion outer membrane protein, TolC family; outer membrane efflux protein 1809122 6877811 Lferr_1827 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220255.1 1807632 D 380394 CDS YP_002220256.1 198283935 6877812 1809212..1810048 1 NC_011206.1 PFAM: polysaccharide deacetylase; KEGG: gsu:GSU2543 polysaccharide deacetylase domain protein; polysaccharide deacetylase 1810048 6877812 Lferr_1828 Acidithiobacillus ferrooxidans ATCC 53993 polysaccharide deacetylase YP_002220256.1 1809212 D 380394 CDS YP_002220257.1 198283936 6877813 1810060..1811427 1 NC_011206.1 KEGG: bvi:Bcep1808_6307 hypothetical protein; hypothetical protein 1811427 6877813 Lferr_1829 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220257.1 1810060 D 380394 CDS YP_002220258.1 198283937 6877814 1811382..1812740 1 NC_011206.1 PFAM: beta-lactamase; KEGG: sus:Acid_3631 uncharacterised conserved protein UCP016719; beta-lactamase 1812740 6877814 Lferr_1830 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase YP_002220258.1 1811382 D 380394 CDS YP_002220259.1 198283938 6877815 complement(1812765..1813289) 1 NC_011206.1 PFAM: NUDIX hydrolase; KEGG: aeh:Mlg_0427 NUDIX hydrolase; NUDIX hydrolase 1813289 6877815 Lferr_1831 Acidithiobacillus ferrooxidans ATCC 53993 NUDIX hydrolase YP_002220259.1 1812765 R 380394 CDS YP_002220260.1 198283939 6877816 complement(1813377..1813820) 1 NC_011206.1 PFAM: NUDIX hydrolase; KEGG: net:Neut_0259 NUDIX hydrolase; NUDIX hydrolase 1813820 6877816 Lferr_1832 Acidithiobacillus ferrooxidans ATCC 53993 NUDIX hydrolase YP_002220260.1 1813377 R 380394 CDS YP_002220261.1 198283940 6877817 complement(1813817..1814530) 1 NC_011206.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ccr:CC_1838 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase 1814530 6877817 Lferr_1833 Acidithiobacillus ferrooxidans ATCC 53993 pseudouridine synthase YP_002220261.1 1813817 R 380394 CDS YP_002220262.1 198283941 6877818 1814615..1815646 1 NC_011206.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: noc:Noc_2447 porphyromonas-type peptidyl-arginine deiminase; Agmatine deiminase 1815646 6877818 Lferr_1834 Acidithiobacillus ferrooxidans ATCC 53993 Agmatine deiminase YP_002220262.1 1814615 D 380394 CDS YP_002220263.1 198283942 6877819 1815838..1818588 1 NC_011206.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cte:CT0496 polysulfide reductase, subunit A, putative; molybdopterin oxidoreductase 1818588 6877819 Lferr_1835 Acidithiobacillus ferrooxidans ATCC 53993 molybdopterin oxidoreductase YP_002220263.1 1815838 D 380394 CDS YP_002220264.1 198283943 6877820 1818599..1819222 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_1686 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1819222 6877820 Lferr_1836 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002220264.1 1818599 D 380394 CDS YP_002220265.1 198283944 6877821 1819219..1820253 1 NC_011206.1 PFAM: Polysulphide reductase NrfD; KEGG: pvi:Cvib_1687 polysulphide reductase, NrfD; polysulfide reductase NrfD 1820253 6877821 Lferr_1837 Acidithiobacillus ferrooxidans ATCC 53993 polysulfide reductase NrfD YP_002220265.1 1819219 D 380394 CDS YP_002220266.1 198283945 6877822 1820261..1820761 1 NC_011206.1 KEGG: hma:rrnAC1211 hypothetical protein; hypothetical protein 1820761 6877822 Lferr_1838 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220266.1 1820261 D 380394 CDS YP_002220267.1 198283946 6877823 1820758..1821291 1 NC_011206.1 hypothetical protein 1821291 6877823 Lferr_1839 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220267.1 1820758 D 380394 CDS YP_002220268.1 198283947 6877824 complement(1821540..1821815) 1 NC_011206.1 hypothetical protein 1821815 6877824 Lferr_1840 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220268.1 1821540 R 380394 CDS YP_002220269.1 198283948 6877825 complement(1821873..1822304) 1 NC_011206.1 PFAM: UspA domain protein; KEGG: maq:Maqu_0620 UspA domain protein; UspA domain-containing protein 1822304 6877825 Lferr_1841 Acidithiobacillus ferrooxidans ATCC 53993 UspA domain-containing protein YP_002220269.1 1821873 R 380394 CDS YP_002220270.1 198283949 6877826 complement(1822357..1823907) 1 NC_011206.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_1624 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 1823907 6877826 Lferr_1842 Acidithiobacillus ferrooxidans ATCC 53993 EmrB/QacA subfamily drug resistance transporter YP_002220270.1 1822357 R 380394 CDS YP_002220271.1 198283950 6877827 complement(1823904..1824347) 1 NC_011206.1 PFAM: regulatory protein MarR; KEGG: kpn:KPN_01489 putative bacterial regulatory protein, MarR; marR family transcriptional regulator 1824347 6877827 Lferr_1843 Acidithiobacillus ferrooxidans ATCC 53993 marR family transcriptional regulator YP_002220271.1 1823904 R 380394 CDS YP_002220272.1 198283951 6877828 1824532..1825350 1 NC_011206.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: pap:PSPA7_0434 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1825350 6877828 Lferr_1844 Acidithiobacillus ferrooxidans ATCC 53993 prolipoprotein diacylglyceryl transferase YP_002220272.1 1824532 D 380394 CDS YP_002220273.1 198283952 6877829 1825372..1827360 1 NC_011206.1 PFAM: UvrD/REP helicase; KEGG: pmy:Pmen_0253 ATP-dependent DNA helicase Rep; UvrD/REP helicase 1827360 6877829 Lferr_1845 Acidithiobacillus ferrooxidans ATCC 53993 UvrD/REP helicase YP_002220273.1 1825372 D 380394 CDS YP_002220274.1 198283953 6877830 complement(1827461..1827736) 1 NC_011206.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1827736 rpsT 6877830 rpsT Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S20 YP_002220274.1 1827461 R 380394 CDS YP_002220275.1 198283954 6877831 complement(1827872..1828885) 1 NC_011206.1 PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: bvi:Bcep1808_7296 ABC transporter related; ABC transporter-like protein 1828885 6877831 Lferr_1847 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220275.1 1827872 R 380394 CDS YP_002220276.1 198283955 6877832 complement(1828905..1829708) 1 NC_011206.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_7295 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1829708 6877832 Lferr_1848 Acidithiobacillus ferrooxidans ATCC 53993 binding-protein-dependent transport system inner membrane protein YP_002220276.1 1828905 R 380394 CDS YP_002220277.1 198283956 6877833 1830085..1830363 1 NC_011206.1 hypothetical protein 1830363 6877833 Lferr_1849 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220277.1 1830085 D 380394 CDS YP_002220278.1 198283957 6877834 1830367..1831206 1 NC_011206.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1831206 apaH 6877834 apaH Acidithiobacillus ferrooxidans ATCC 53993 diadenosine tetraphosphatase YP_002220278.1 1830367 D 380394 CDS YP_002220279.1 198283958 6877835 1831262..1833073 1 NC_011206.1 KEGG: aeh:Mlg_0870 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 1833073 6877835 Lferr_1851 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent DNA helicase RecQ YP_002220279.1 1831262 D 380394 CDS YP_002220280.1 198283959 6877836 1833161..1833475 1 NC_011206.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: aha:AHA_0472 protein CyaY; iron donor protein CyaY 1833475 6877836 Lferr_1852 Acidithiobacillus ferrooxidans ATCC 53993 iron donor protein CyaY YP_002220280.1 1833161 D 380394 CDS YP_002220281.1 198283960 6877837 1833480..1833932 1 NC_011206.1 PFAM: protein of unknown function DUF55; KEGG: dra:DR_0566 hypothetical protein; hypothetical protein 1833932 6877837 Lferr_1853 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220281.1 1833480 D 380394 CDS YP_002220282.1 198283961 6877838 1834049..1834393 1 NC_011206.1 hypothetical protein 1834393 6877838 Lferr_1854 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220282.1 1834049 D 380394 CDS YP_002220283.1 198283962 6877839 complement(1834386..1835459) 1 NC_011206.1 PFAM: permease YjgP/YjgQ family protein; KEGG: azo:azo2902 probable integral membrane protein; YjgP/YjgQ family permease 1835459 6877839 Lferr_1855 Acidithiobacillus ferrooxidans ATCC 53993 YjgP/YjgQ family permease YP_002220283.1 1834386 R 380394 CDS YP_002220284.1 198283963 6877840 complement(1835456..1836562) 1 NC_011206.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eba:ebA7173 hypothetical protein; YjgP/YjgQ family permease 1836562 6877840 Lferr_1856 Acidithiobacillus ferrooxidans ATCC 53993 YjgP/YjgQ family permease YP_002220284.1 1835456 R 380394 CDS YP_002220285.1 198283964 6877841 1836694..1838196 1 NC_011206.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: hha:Hhal_0681 leucyl aminopeptidase; leucyl aminopeptidase 1838196 6877841 Lferr_1857 Acidithiobacillus ferrooxidans ATCC 53993 leucyl aminopeptidase YP_002220285.1 1836694 D 380394 CDS YP_002220286.1 198283965 6877842 1838209..1838634 1 NC_011206.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: sdn:Sden_2866 DNA polymerase III chi subunit, HolC; DNA polymerase III subunit chi HolC 1838634 6877842 Lferr_1858 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase III subunit chi HolC YP_002220286.1 1838209 D 380394 CDS YP_002220287.1 198283966 6877843 1838648..1839343 1 NC_011206.1 KEGG: dge:Dgeo_2350 magnesium chelatase, ChlI subunit; hypothetical protein 1839343 6877843 Lferr_1859 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220287.1 1838648 D 380394 CDS YP_002220288.1 198283967 6877844 1839340..1842156 1 NC_011206.1 TIGRFAM: valyl-tRNA synthetase; KEGG: noc:Noc_1091 valyl-tRNA synthetase, class Ia; valyl-tRNA synthetase 1842156 6877844 Lferr_1860 Acidithiobacillus ferrooxidans ATCC 53993 valyl-tRNA synthetase YP_002220288.1 1839340 D 380394 CDS YP_002220289.1 198283968 6877845 1842187..1843542 1 NC_011206.1 PFAM: Na+/H+ antiporter NhaA; KEGG: sfu:Sfum_2570 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 1843542 6877845 Lferr_1861 Acidithiobacillus ferrooxidans ATCC 53993 Na+/H+ antiporter NhaA YP_002220289.1 1842187 D 380394 CDS YP_002220290.1 198283969 6877846 1843539..1844366 1 NC_011206.1 KEGG: azo:azo2079 nicotinate-nucleotide diphosphorylase (carboxylating); TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 1844366 6877846 Lferr_1862 Acidithiobacillus ferrooxidans ATCC 53993 nicotinate-nucleotide pyrophosphorylase YP_002220290.1 1843539 D 380394 CDS YP_002220291.1 198283970 6877847 complement(1844379..1845617) 1 NC_011206.1 KEGG: mfa:Mfla_0394 hypothetical protein; hypothetical protein 1845617 6877847 Lferr_1863 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220291.1 1844379 R 380394 CDS YP_002220292.1 198283971 6877848 1845780..1846394 1 NC_011206.1 PFAM: regulatory protein TetR; KEGG: tbd:Tbd_0482 possible transcriptional regulator, TetR family; TetR family transcriptional regulator 1846394 6877848 Lferr_1864 Acidithiobacillus ferrooxidans ATCC 53993 TetR family transcriptional regulator YP_002220292.1 1845780 D 380394 CDS YP_002220293.1 198283972 6877849 1846375..1847103 1 NC_011206.1 PFAM: dienelactone hydrolase; BAAT/Acyl-CoA thioester hydrolase; KEGG: tel:tlr1423 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 1847103 6877849 Lferr_1865 Acidithiobacillus ferrooxidans ATCC 53993 carboxymethylenebutenolidase YP_002220293.1 1846375 D 380394 CDS YP_002220294.1 198283973 6877850 1847100..1848176 1 NC_011206.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gme:Gmet_2577 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1848176 6877850 Lferr_1866 Acidithiobacillus ferrooxidans ATCC 53993 NADH:flavin oxidoreductase YP_002220294.1 1847100 D 380394 CDS YP_002220295.1 198283974 6877851 complement(1848259..1848885) 1 NC_011206.1 KEGG: hha:Hhal_2252 hypothetical protein; hypothetical protein 1848885 6877851 Lferr_1867 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220295.1 1848259 R 380394 CDS YP_002220296.1 198283975 6877853 1849093..1849659 1 NC_011206.1 PFAM: protein of unknown function DUF805; KEGG: rde:RD1_1610 hypothetical protein; hypothetical protein 1849659 6877853 Lferr_1868 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220296.1 1849093 D 380394 CDS YP_002220297.1 198283976 6877854 1849692..1850486 1 NC_011206.1 TIGRFAM: methyltransferase FkbM family; KEGG: pnu:Pnuc_1098 methyltransferase FkbM family; FkbM family methyltransferase 1850486 6877854 Lferr_1869 Acidithiobacillus ferrooxidans ATCC 53993 FkbM family methyltransferase YP_002220297.1 1849692 D 380394 CDS YP_002220298.1 198283977 6877855 1850603..1851496 1 NC_011206.1 PFAM: alpha/beta hydrolase fold; KEGG: hma:rrnAC2850 hydrolase alpha/beta hydrolase fold family; alpha/beta fold family hydrolase 1851496 6877855 Lferr_1870 Acidithiobacillus ferrooxidans ATCC 53993 alpha/beta fold family hydrolase YP_002220298.1 1850603 D 380394 CDS YP_002220299.1 198283978 6877856 complement(1851489..1852058) 1 NC_011206.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: xcb:XC_0112 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1852058 6877856 Lferr_1871 Acidithiobacillus ferrooxidans ATCC 53993 isoprenylcysteine carboxyl methyltransferase YP_002220299.1 1851489 R 380394 CDS YP_002220300.1 198283979 6877857 complement(1852164..1852847) 1 NC_011206.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ilo:IL1347 predicted phosphatase related to gph; HAD-superfamily hydrolase 1852847 6877857 Lferr_1872 Acidithiobacillus ferrooxidans ATCC 53993 HAD-superfamily hydrolase YP_002220300.1 1852164 R 380394 CDS YP_002220301.1 198283980 6877858 complement(1852844..1853797) 1 NC_011206.1 KEGG: spe:Spro_1899 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1853797 6877858 Lferr_1873 Acidithiobacillus ferrooxidans ATCC 53993 RluA family pseudouridine synthase YP_002220301.1 1852844 R 380394 CDS YP_002220302.1 198283981 6877859 1853994..1856342 1 NC_011206.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: maq:Maqu_1876 ribonuclease, Rne/Rng family; Rne/Rng family ribonuclease 1856342 6877859 Lferr_1874 Acidithiobacillus ferrooxidans ATCC 53993 Rne/Rng family ribonuclease YP_002220302.1 1853994 D 380394 CDS YP_002220303.1 198283982 6877860 complement(1856385..1857773) 1 NC_011206.1 KEGG: aeh:Mlg_1810 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase 1857773 6877860 Lferr_1875 Acidithiobacillus ferrooxidans ATCC 53993 cysteinyl-tRNA synthetase YP_002220303.1 1856385 R 380394 CDS YP_002220304.1 198283983 6877861 complement(1857770..1859218) 1 NC_011206.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: aeh:Mlg_1811 glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 1859218 6877861 Lferr_1876 Acidithiobacillus ferrooxidans ATCC 53993 glutamyl-tRNA synthetase YP_002220304.1 1857770 R 380394 CDS YP_002220305.1 198283984 6877862 1859316..1861805 1 NC_011206.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mca:MCA0324 penicillin-binding protein 1A; peptidoglycan glycosyltransferase 1861805 6877862 Lferr_1877 Acidithiobacillus ferrooxidans ATCC 53993 peptidoglycan glycosyltransferase YP_002220305.1 1859316 D 380394 CDS YP_002220306.1 198283985 6877863 1861806..1864166 1 NC_011206.1 PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: bbt:BBta_p0098 putative glucoamylase precursor; glucan 1,4-alpha-glucosidase 1864166 6877863 Lferr_1878 Acidithiobacillus ferrooxidans ATCC 53993 glucan 1,4-alpha-glucosidase YP_002220306.1 1861806 D 380394 CDS YP_002220307.1 198283986 6877864 1864163..1864948 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tac:Ta0191 probable glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR 1864948 6877864 Lferr_1879 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002220307.1 1864163 D 380394 CDS YP_002220308.1 198283987 6877865 1865258..1865794 1 NC_011206.1 hypothetical protein 1865794 6877865 Lferr_1880 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220308.1 1865258 D 380394 CDS YP_002220309.1 198283988 6877866 1865791..1866789 1 NC_011206.1 PFAM: aminoglycoside phosphotransferase; KEGG: sat:SYN_02490 hypothetical cytosolic protein; aminoglycoside phosphotransferase 1866789 6877866 Lferr_1881 Acidithiobacillus ferrooxidans ATCC 53993 aminoglycoside phosphotransferase YP_002220309.1 1865791 D 380394 CDS YP_002220310.1 198283989 6877867 1866794..1867540 1 NC_011206.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nmu:Nmul_A1707 haloacid dehalogenase-like hydrolase; haloacid dehalogenase domain-containing protein hydrolase 1867540 6877867 Lferr_1882 Acidithiobacillus ferrooxidans ATCC 53993 haloacid dehalogenase domain-containing protein hydrolase YP_002220310.1 1866794 D 380394 CDS YP_002220311.1 198283990 6877868 complement(1867593..1868336) 1 NC_011206.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aav:Aave_0359 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1868336 6877868 Lferr_1883 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220311.1 1867593 R 380394 CDS YP_002220312.1 198283991 6877869 complement(1868340..1871081) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: hau:Haur_2273 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 1871081 6877869 Lferr_1884 Acidithiobacillus ferrooxidans ATCC 53993 osmosensitive K+ channel signal transduction histidine kinase YP_002220312.1 1868340 R 380394 CDS YP_002220313.1 198283992 6877870 1871533..1873284 1 NC_011206.1 KEGG: cvi:CV_1599 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1873284 6877870 Lferr_1885 Acidithiobacillus ferrooxidans ATCC 53993 potassium-transporting ATPase subunit A YP_002220313.1 1871533 D 380394 CDS YP_002220314.1 198283993 6877871 1873297..1875366 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: eca:ECA1341 potassium-transporting ATPase subunit B; K+-transporting ATPase subunit B 1875366 6877871 Lferr_1886 Acidithiobacillus ferrooxidans ATCC 53993 K+-transporting ATPase subunit B YP_002220314.1 1873297 D 380394 CDS YP_002220315.1 198283994 6877872 1875379..1875999 1 NC_011206.1 KEGG: bbr:BB3919 potassium-transporting ATPase subunit C; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 1875999 6877872 Lferr_1887 Acidithiobacillus ferrooxidans ATCC 53993 potassium-transporting ATPase subunit C YP_002220315.1 1875379 D 380394 CDS YP_002220316.1 198283995 6877873 1876047..1876313 1 NC_011206.1 KEGG: rpc:RPC_2258 hypothetical protein; hypothetical protein 1876313 6877873 Lferr_1888 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220316.1 1876047 D 380394 CDS YP_002220317.1 198283996 6877874 1876511..1877041 1 NC_011206.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: tcx:Tcr_0344 gamma-glutamyl kinase; aspartate/glutamate/uridylate kinase 1877041 6877874 Lferr_1889 Acidithiobacillus ferrooxidans ATCC 53993 aspartate/glutamate/uridylate kinase YP_002220317.1 1876511 D 380394 CDS YP_002220318.1 198283997 6877875 1877113..1878327 1 NC_011206.1 KEGG: mrd:Mrad2831_2268 hypothetical protein; hypothetical protein 1878327 6877875 Lferr_1890 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220318.1 1877113 D 380394 CDS YP_002220319.1 198283998 6877876 1878383..1878781 1 NC_011206.1 PFAM: nitrogen regulatory protein P-II; KEGG: azo:azo3739 PII-like signal transmitter protein GlnK; nitrogen regulatory protein P-II 1878781 6877876 Lferr_1891 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen regulatory protein P-II YP_002220319.1 1878383 D 380394 CDS YP_002220320.1 198283999 6877877 1879136..1879495 1 NC_011206.1 hypothetical protein 1879495 6877877 Lferr_1892 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220320.1 1879136 D 380394 CDS YP_002220321.1 198284000 6877878 1879776..1880048 1 NC_011206.1 hypothetical protein 1880048 6877878 Lferr_1893 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220321.1 1879776 D 380394 CDS YP_002220322.1 198284001 6877879 1880118..1880237 1 NC_011206.1 hypothetical protein 1880237 6877879 Lferr_1894 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220322.1 1880118 D 380394 CDS YP_002220323.1 198284002 6877880 1880250..1881443 1 NC_011206.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_5112 Na+/H+ antiporter; sodium/hydrogen exchanger 1881443 6877880 Lferr_1895 Acidithiobacillus ferrooxidans ATCC 53993 sodium/hydrogen exchanger YP_002220323.1 1880250 D 380394 CDS YP_002220324.1 198284003 6877881 complement(1881700..1882305) 1 NC_011206.1 KEGG: mms:mma_3066 thiol:disulfide interchange protein DsbG; hypothetical protein 1882305 6877881 Lferr_1896 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220324.1 1881700 R 380394 CDS YP_002220325.1 198284004 6877882 complement(1882420..1882860) 1 NC_011206.1 hypothetical protein 1882860 6877882 Lferr_1897 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220325.1 1882420 R 380394 CDS YP_002220326.1 198284005 6877883 complement(1883488..1884609) 1 NC_011206.1 PFAM: Carbohydrate-selective porin OprB; KEGG: bpd:BURPS668_0296 carbohydrate porin, OprB family; carbohydrate-selective porin OprB 1884609 6877883 Lferr_1898 Acidithiobacillus ferrooxidans ATCC 53993 carbohydrate-selective porin OprB YP_002220326.1 1883488 R 380394 CDS YP_002220327.1 198284006 6877884 complement(1884622..1885809) 1 NC_011206.1 PFAM: Pyrrolo-quinoline quinone; KEGG: nph:NP5062A predicted cell surface protein/lipoprotein; pyrrolo-quinoline quinone 1885809 6877884 Lferr_1899 Acidithiobacillus ferrooxidans ATCC 53993 pyrrolo-quinoline quinone YP_002220327.1 1884622 R 380394 CDS YP_002220328.1 198284007 6877885 1886164..1891650 1 NC_011206.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: mlo:mlr1663 hypothetical protein; alpha-2-macroglobulin domain-containing protein 1891650 6877885 Lferr_1900 Acidithiobacillus ferrooxidans ATCC 53993 alpha-2-macroglobulin domain-containing protein YP_002220328.1 1886164 D 380394 CDS YP_002220329.1 198284008 6877886 1891658..1893724 1 NC_011206.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rru:Rru_A0105 penicillin-binding protein 1C; glycosyl transferase 1893724 6877886 Lferr_1901 Acidithiobacillus ferrooxidans ATCC 53993 glycosyl transferase YP_002220329.1 1891658 D 380394 CDS YP_002220330.1 198284009 6877887 complement(1894020..1894373) 1 NC_011206.1 hypothetical protein 1894373 6877887 Lferr_1902 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220330.1 1894020 R 380394 CDS YP_002220331.1 198284010 6877888 complement(1894386..1895177) 1 NC_011206.1 PFAM: beta-lactamase domain protein; KEGG: rme:Rmet_0019 beta-lactamase-like protein; beta-lactamase domain-containing protein 1895177 6877888 Lferr_1903 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002220331.1 1894386 R 380394 CDS YP_002220332.1 198284011 6877889 complement(1895321..1896076) 1 NC_011206.1 KEGG: xau:Xaut_2486 hypothetical protein; hypothetical protein 1896076 6877889 Lferr_1904 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220332.1 1895321 R 380394 CDS YP_002220333.1 198284012 6877890 complement(1896077..1896994) 1 NC_011206.1 PFAM: protein of unknown function DUF81; KEGG: mag:amb4406 predicted permease; hypothetical protein 1896994 6877890 Lferr_1905 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220333.1 1896077 R 380394 CDS YP_002220334.1 198284013 6877891 complement(1896996..1897529) 1 NC_011206.1 PFAM: UspA domain protein; KEGG: nfa:nfa29970 hypothetical protein; UspA domain-containing protein 1897529 6877891 Lferr_1906 Acidithiobacillus ferrooxidans ATCC 53993 UspA domain-containing protein YP_002220334.1 1896996 R 380394 CDS YP_002220335.1 198284014 6877892 1897779..1899344 1 NC_011206.1 KEGG: gme:Gmet_2905 AICARFT/IMPCHase bienzyme:MGS-like; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1899344 6877892 Lferr_1907 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002220335.1 1897779 D 380394 CDS YP_002220336.1 198284015 6877893 1899358..1900620 1 NC_011206.1 KEGG: abo:ABO_2016 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 1900620 6877893 Lferr_1908 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylamine--glycine ligase YP_002220336.1 1899358 D 380394 CDS YP_002220337.1 198284016 6877894 1900636..1901196 1 NC_011206.1 PFAM: SUA5/yciO/yrdC domain; KEGG: hha:Hhal_2328 SUA5/YciO/YrdC/YwlC family protein; SUA5/yciO/yrdC domain 1901196 6877894 Lferr_1909 Acidithiobacillus ferrooxidans ATCC 53993 SUA5/yciO/yrdC domain YP_002220337.1 1900636 D 380394 CDS YP_002220338.1 198284017 6877895 1901201..1902091 1 NC_011206.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1902091 6877895 Lferr_1910 Acidithiobacillus ferrooxidans ATCC 53993 coproporphyrinogen III oxidase YP_002220338.1 1901201 D 380394 CDS YP_002220339.1 198284018 6877896 1902088..1903179 1 NC_011206.1 PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_2860 dihydroorotate oxidase; dihydroorotate oxidase 1903179 6877896 Lferr_1911 Acidithiobacillus ferrooxidans ATCC 53993 dihydroorotate oxidase YP_002220339.1 1902088 D 380394 CDS YP_002220340.1 198284019 6877897 1903339..1903488 1 NC_011206.1 hypothetical protein 1903488 6877897 Lferr_1912 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220340.1 1903339 D 380394 CDS YP_002220341.1 198284020 6877898 1903805..1904353 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO1091 acetyltransferase; N-acetyltransferase GCN5 1904353 6877898 Lferr_1913 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002220341.1 1903805 D 380394 CDS YP_002220342.1 198284021 6877899 complement(1904357..1905973) 1 NC_011206.1 PFAM: phosphoesterase; KEGG: mca:MCA2512 acid phosphatase; phospholipase C 1905973 6877899 Lferr_1914 Acidithiobacillus ferrooxidans ATCC 53993 phospholipase C YP_002220342.1 1904357 R 380394 CDS YP_002220343.1 198284022 6877900 complement(1905988..1906701) 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: acr:Acry_0296 TonB family protein; TonB family protein 1906701 6877900 Lferr_1915 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002220343.1 1905988 R 380394 CDS YP_002220344.1 198284023 6877901 complement(1906723..1907124) 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1907124 6877901 Lferr_1916 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002220344.1 1906723 R 380394 CDS YP_002220345.1 198284024 6877902 complement(1907124..1907807) 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_3610 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1907807 6877902 Lferr_1917 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002220345.1 1907124 R 380394 CDS YP_002220346.1 198284025 6877903 complement(1907872..1908630) 1 NC_011206.1 PFAM: transcriptional regulator domain protein; KEGG: noc:Noc_2401 phosphate regulon transcriptional regulatory protein PhoB; winged helix family two component transcriptional regulator 1908630 6877903 Lferr_1918 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220346.1 1907872 R 380394 CDS YP_002220347.1 198284026 6877904 complement(1908809..1909321) 1 NC_011206.1 KEGG: mpt:Mpe_A0534 hypothetical protein; hypothetical protein 1909321 6877904 Lferr_1919 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220347.1 1908809 R 380394 CDS YP_002220348.1 198284027 6877905 1909798..1910490 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_1460 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1910490 6877905 Lferr_1920 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002220348.1 1909798 D 380394 CDS YP_002220349.1 198284028 6877906 1910524..1913412 1 NC_011206.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sus:Acid_4558 40-residue YVTN family beta-propeller repeat protein; SMP-30/gluconolaconase/LRE domain-containing protein 1913412 6877906 Lferr_1921 Acidithiobacillus ferrooxidans ATCC 53993 SMP-30/gluconolaconase/LRE domain-containing protein YP_002220349.1 1910524 D 380394 CDS YP_002220350.1 198284029 6877907 1913589..1914215 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: acr:Acry_0296 TonB family protein; TonB family protein 1914215 6877907 Lferr_1922 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002220350.1 1913589 D 380394 CDS YP_002220351.1 198284030 6877908 1914254..1914853 1 NC_011206.1 KEGG: bte:BTH_II2048 hypothetical protein; hypothetical protein 1914853 6877908 Lferr_1923 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220351.1 1914254 D 380394 CDS YP_002220352.1 198284031 6877909 1914892..1916289 1 NC_011206.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mhu:Mhun_1633 general substrate transporter; major facilitator superfamily protein 1916289 6877909 Lferr_1924 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220352.1 1914892 D 380394 CDS YP_002220353.1 198284032 6877910 1916389..1916865 1 NC_011206.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; KEGG: kpn:KPN_04499 phosphonate metabolism; phosphonate C-P lyase system protein PhnG 1916865 6877910 Lferr_1925 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate C-P lyase system protein PhnG YP_002220353.1 1916389 D 380394 CDS YP_002220354.1 198284033 6877911 1916862..1917404 1 NC_011206.1 TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: yen:YE0476 carbon-phosphorus lyase complex subunit; phosphonate C-P lyase system protein PhnH 1917404 6877911 Lferr_1926 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate C-P lyase system protein PhnH YP_002220354.1 1916862 D 380394 CDS YP_002220355.1 198284034 6877912 1917408..1918505 1 NC_011206.1 PFAM: phosphonate metabolism; KEGG: acr:Acry_2913 phosphonate metabolism; phosphonate metabolism protein 1918505 6877912 Lferr_1927 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate metabolism protein YP_002220355.1 1917408 D 380394 CDS YP_002220356.1 198284035 6877913 1918502..1919326 1 NC_011206.1 PFAM: phosphonate metabolism PhnJ; KEGG: acr:Acry_2914 phosphonate metabolism PhnJ; phosphonate metabolism PhnJ 1919326 6877913 Lferr_1928 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate metabolism PhnJ YP_002220356.1 1918502 D 380394 CDS YP_002220357.1 198284036 6877914 1919323..1920105 1 NC_011206.1 KEGG: pau:PA14_20400 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 1920105 phnK 6877914 phnK Acidithiobacillus ferrooxidans ATCC 53993 phosphonate C-P lyase system protein PhnK YP_002220357.1 1919323 D 380394 CDS YP_002220358.1 198284037 6877915 1920102..1920800 1 NC_011206.1 KEGG: oan:Oant_2191 phosphonate C-P lyase system protein PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 1920800 6877915 Lferr_1930 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate C-P lyase system protein PhnL YP_002220358.1 1920102 D 380394 CDS YP_002220359.1 198284038 6877916 1920797..1921933 1 NC_011206.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: acr:Acry_2917 phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM 1921933 6877916 Lferr_1931 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate metabolism protein PhnM YP_002220359.1 1920797 D 380394 CDS YP_002220360.1 198284039 6877917 1921941..1922618 1 NC_011206.1 TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; KEGG: acr:Acry_2918 protein of unknown function DUF1045; phosphonate metabolism protein 1922618 6877917 Lferr_1932 Acidithiobacillus ferrooxidans ATCC 53993 phosphonate metabolism protein YP_002220360.1 1921941 D 380394 CDS YP_002220361.1 198284040 6877918 1922611..1923156 1 NC_011206.1 KEGG: mlo:mll4973 hypothetical protein; hypothetical protein 1923156 6877918 Lferr_1933 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220361.1 1922611 D 380394 CDS YP_002220362.1 198284041 6877919 1923153..1923905 1 NC_011206.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: acr:Acry_2920 transcriptional regulator, GntR family; GntR family transcriptional regulator 1923905 6877919 Lferr_1934 Acidithiobacillus ferrooxidans ATCC 53993 GntR family transcriptional regulator YP_002220362.1 1923153 D 380394 CDS YP_002220363.1 198284042 6877920 complement(1924015..1926354) 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_3609 TonB-dependent receptor; TonB-dependent receptor 1926354 6877920 Lferr_1935 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220363.1 1924015 R 380394 CDS YP_002220364.1 198284043 6877921 complement(1926964..1927170) 1 NC_011206.1 hypothetical protein 1927170 6877921 Lferr_1936 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220364.1 1926964 R 380394 CDS YP_002220365.1 198284044 6877922 complement(1927196..1929517) 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_3609 TonB-dependent receptor; TonB-dependent receptor 1929517 6877922 Lferr_1937 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220365.1 1927196 R 380394 CDS YP_002220366.1 198284045 6877925 1931673..1932374 1 NC_011206.1 PFAM: phosphoesterase; KEGG: bxe:Bxe_A1301 putative acid phosphatase; phosphoesterase 1932374 6877925 Lferr_1940 Acidithiobacillus ferrooxidans ATCC 53993 phosphoesterase YP_002220366.1 1931673 D 380394 CDS YP_002220367.1 198284046 6877926 1932469..1934676 1 NC_011206.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1075 TonB-dependent outer membrane receptor; TonB-dependent receptor 1934676 6877926 Lferr_1941 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220367.1 1932469 D 380394 CDS YP_002220368.1 198284047 6877927 1934732..1935409 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_3610 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1935409 6877927 Lferr_1942 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002220368.1 1934732 D 380394 CDS YP_002220369.1 198284048 6877928 1935412..1935801 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1935801 6877928 Lferr_1943 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002220369.1 1935412 D 380394 CDS YP_002220370.1 198284049 6877929 1935807..1936535 1 NC_011206.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bpd:BURPS668_A0619 TonB domain protein; TonB family protein 1936535 6877929 Lferr_1944 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002220370.1 1935807 D 380394 CDS YP_002220371.1 198284050 6877930 1936556..1938772 1 NC_011206.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_4325 TonB-dependent receptor; TonB-dependent receptor 1938772 6877930 Lferr_1945 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220371.1 1936556 D 380394 CDS YP_002220372.1 198284051 6877931 1938873..1941710 1 NC_011206.1 KEGG: bpd:BURPS668_A2873 lipoprotein, putative; lipoprotein 1941710 6877931 Lferr_1946 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein YP_002220372.1 1938873 D 380394 CDS YP_002220373.1 198284052 6877932 1941843..1942499 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: ppw:PputW619_0295 TonB family protein; TonB family protein 1942499 6877932 Lferr_1947 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002220373.1 1941843 D 380394 CDS YP_002220374.1 198284053 6877933 1942569..1942931 1 NC_011206.1 KEGG: eba:ebA362 phosphodiesterase/alkaline phosphatase D; hypothetical protein 1942931 6877933 Lferr_1948 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220374.1 1942569 D 380394 CDS YP_002220375.1 198284054 6877934 complement(1942942..1943796) 1 NC_011206.1 PFAM: transcriptional regulator domain protein; KEGG: plu:plu3911 phosphate regulon transcriptional regulatory protein; winged helix family two component transcriptional regulator 1943796 6877934 Lferr_1949 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220375.1 1942942 R 380394 CDS YP_002220376.1 198284055 6877936 complement(1944485..1945759) 1 NC_011206.1 KEGG: acr:Acry_0114 hypothetical protein; hypothetical protein 1945759 6877936 Lferr_1951 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220376.1 1944485 R 380394 CDS YP_002220377.1 198284056 6877937 complement(1946031..1946267) 1 NC_011206.1 KEGG: gme:Gmet_3283 transposase, IS4; transposase, IS4 1946267 6877937 Lferr_1952 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220377.1 1946031 R 380394 CDS YP_002220378.1 198284057 6877938 complement(1946501..1947859) 1 NC_011206.1 KEGG: acr:Acry_0468 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 1947859 6877938 Lferr_1953 Acidithiobacillus ferrooxidans ATCC 53993 sugar transporter YP_002220378.1 1946501 R 380394 CDS YP_002220379.1 198284058 6877940 complement(1948532..1949014) 1 NC_011206.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: dsy:DSY1024 hypothetical protein; phosphohistidine phosphatase SixA 1949014 6877940 Lferr_1955 Acidithiobacillus ferrooxidans ATCC 53993 phosphohistidine phosphatase SixA YP_002220379.1 1948532 R 380394 CDS YP_002220380.1 198284059 6877942 complement(1949298..1949834) 1 NC_011206.1 PFAM: outer membrane lipoprotein Slp; KEGG: xcv:XCV1131 Slp family outer membrane protein; outer membrane lipoprotein Slp 1949834 6877942 Lferr_1956 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane lipoprotein Slp YP_002220380.1 1949298 R 380394 CDS YP_002220381.1 198284060 6877943 complement(1949951..1951246) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tbd:Tbd_2353 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1951246 6877943 Lferr_1957 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002220381.1 1949951 R 380394 CDS YP_002220382.1 198284061 6877944 complement(1951243..1951923) 1 NC_011206.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tbd:Tbd_2354 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1951923 6877944 Lferr_1958 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220382.1 1951243 R 380394 CDS YP_002220383.1 198284062 6877945 1952496..1953080 1 NC_011206.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: aeh:Mlg_1502 oligoribonuclease; Exonuclease RNase T and DNA polymerase III 1953080 6877945 Lferr_1959 Acidithiobacillus ferrooxidans ATCC 53993 Exonuclease RNase T and DNA polymerase III YP_002220383.1 1952496 D 380394 CDS YP_002220384.1 198284063 6877946 1953227..1954315 1 NC_011206.1 PFAM: Luciferase-like monooxygenase; KEGG: bja:bll7033 LuxA-like protein; luciferase-like monooxygenase 1954315 6877946 Lferr_1960 Acidithiobacillus ferrooxidans ATCC 53993 luciferase-like monooxygenase YP_002220384.1 1953227 D 380394 CDS YP_002220385.1 198284064 6877947 1954315..1955277 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: sen:SACE_4154 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1955277 6877947 Lferr_1961 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002220385.1 1954315 D 380394 CDS YP_002220386.1 198284065 6877948 1955299..1956189 1 NC_011206.1 KEGG: mav:MAV_1064 hypothetical protein; hypothetical protein 1956189 6877948 Lferr_1962 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220386.1 1955299 D 380394 CDS YP_002220387.1 198284066 6877949 1956249..1957880 1 NC_011206.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1957880 6877949 Lferr_1963 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglucomutase YP_002220387.1 1956249 D 380394 CDS YP_002220388.1 198284067 6877950 1957896..1958258 1 NC_011206.1 KEGG: gur:Gura_2893 hypothetical protein; hypothetical protein 1958258 6877950 Lferr_1964 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220388.1 1957896 D 380394 CDS YP_002220389.1 198284068 6877952 1958388..1960931 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sat:SYN_02760 Mg(2+) transport ATPase, P-type; magnesium-translocating P-type ATPase 1960931 6877952 Lferr_1965 Acidithiobacillus ferrooxidans ATCC 53993 magnesium-translocating P-type ATPase YP_002220389.1 1958388 D 380394 CDS YP_002220390.1 198284069 6877953 1961189..1961779 1 NC_011206.1 PFAM: cytochrome B561; KEGG: bpt:Bpet1668 cytochrome b561 family protein; cytochrome B561 1961779 6877953 Lferr_1966 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome B561 YP_002220390.1 1961189 D 380394 CDS YP_002220391.1 198284070 6877954 1962519..1963313 1 NC_011206.1 PFAM: protein of unknown function DUF347; KEGG: acr:Acry_2739 protein of unknown function DUF347; hypothetical protein 1963313 6877954 Lferr_1967 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220391.1 1962519 D 380394 CDS YP_002220392.1 198284071 6877955 1963714..1965030 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_5122 major facilitator superfamily MFS_1; major facilitator superfamily protein 1965030 6877955 Lferr_1968 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220392.1 1963714 D 380394 CDS YP_002220393.1 198284072 6877956 complement(1964912..1965838) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_0457 transcriptional regulator, LysR family; LysR family transcriptional regulator 1965838 6877956 Lferr_1969 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002220393.1 1964912 R 380394 CDS YP_002220394.1 198284073 6877958 complement(1966393..1968288) 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: azo:azo3227 RNA polymerase sigma factor RpoD; RNA polymerase sigma-70 subunit RpoD 1968288 6877958 Lferr_1970 Acidithiobacillus ferrooxidans ATCC 53993 RNA polymerase sigma-70 subunit RpoD YP_002220394.1 1966393 R 380394 CDS YP_002220395.1 198284074 6877959 complement(1968390..1970141) 1 NC_011206.1 KEGG: asa:ASA_3462 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 1970141 6877959 Lferr_1971 Acidithiobacillus ferrooxidans ATCC 53993 DNA primase YP_002220395.1 1968390 R 380394 CDS YP_002220396.1 198284075 6877960 complement(1970145..1972469) 1 NC_011206.1 PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: pca:Pcar_2680 mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS domain-containing protein 1972469 6877960 Lferr_1972 Acidithiobacillus ferrooxidans ATCC 53993 DNA mismatch repair protein MutS domain-containing protein YP_002220396.1 1970145 R 380394 CDS YP_002220397.1 198284076 6877961 complement(1972481..1972927) 1 NC_011206.1 KEGG: mms:mma_0491 hypothetical protein; hypothetical protein 1972927 6877961 Lferr_1973 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220397.1 1972481 R 380394 CDS YP_002220398.1 198284077 6877962 complement(1972927..1973142) 1 NC_011206.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1973142 rpsU 6877962 rpsU Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S21 YP_002220398.1 1972927 R 380394 CDS YP_002220399.1 198284078 6877963 1973431..1974288 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: slo:Shew_1213 RNA polymerase, sigma 70 subunit, RpoD family; RNA polymerase sigma-32 subunit RpoH 1974288 6877963 Lferr_1975 Acidithiobacillus ferrooxidans ATCC 53993 RNA polymerase sigma-32 subunit RpoH YP_002220399.1 1973431 D 380394 CDS YP_002220400.1 198284079 6877964 complement(1974255..1974878) 1 NC_011206.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: ecs:ECs3830 putative deoxyribonucleotide triphosphate pyrophosphatase; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1974878 6877964 Lferr_1976 Acidithiobacillus ferrooxidans ATCC 53993 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_002220400.1 1974255 R 380394 CDS YP_002220401.1 198284080 6877965 complement(1974875..1975603) 1 NC_011206.1 KEGG: cvi:CV_3847 tRNA nucleotidyltransferase; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 1975603 6877965 Lferr_1977 Acidithiobacillus ferrooxidans ATCC 53993 ribonuclease PH YP_002220401.1 1974875 R 380394 CDS YP_002220402.1 198284081 6877966 1975743..1976237 1 NC_011206.1 PFAM: cyclic nucleotide-binding; KEGG: tcx:Tcr_1127 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 1976237 6877966 Lferr_1978 Acidithiobacillus ferrooxidans ATCC 53993 cyclic nucleotide-binding protein YP_002220402.1 1975743 D 380394 CDS YP_002220403.1 198284082 6877967 complement(1976264..1976821) 1 NC_011206.1 PFAM: peptidase S16 lon domain protein; KEGG: aeh:Mlg_0602 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein 1976821 6877967 Lferr_1979 Acidithiobacillus ferrooxidans ATCC 53993 peptidase S16 lon domain-containing protein YP_002220403.1 1976264 R 380394 CDS YP_002220404.1 198284083 6877968 1976846..1978003 1 NC_011206.1 KEGG: rfr:Rfer_1631 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1978003 6877968 Lferr_1980 Acidithiobacillus ferrooxidans ATCC 53993 oxygen-independent coproporphyrinogen III oxidase YP_002220404.1 1976846 D 380394 CDS YP_002220405.1 198284084 6877969 complement(1978018..1978329) 1 NC_011206.1 KEGG: maq:Maqu_3831 hypothetical protein; hypothetical protein 1978329 6877969 Lferr_1981 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220405.1 1978018 R 380394 CDS YP_002220406.1 198284085 6877970 1978341..1979147 1 NC_011206.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: xac:XAC1014 pseudouridylate synthase; pseudouridine synthase 1979147 6877970 Lferr_1982 Acidithiobacillus ferrooxidans ATCC 53993 pseudouridine synthase YP_002220406.1 1978341 D 380394 CDS YP_002220407.1 198284086 6877971 1979263..1979421 1 NC_011206.1 hypothetical protein 1979421 6877971 Lferr_1983 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220407.1 1979263 D 380394 CDS YP_002220408.1 198284087 6877972 1979647..1981182 1 NC_011206.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: vvy:VVA0679 permease; EmrB/QacA subfamily drug resistance transporter 1981182 6877972 Lferr_1984 Acidithiobacillus ferrooxidans ATCC 53993 EmrB/QacA subfamily drug resistance transporter YP_002220408.1 1979647 D 380394 CDS YP_002220409.1 198284088 6877973 complement(1981192..1982145) 1 NC_011206.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: hch:HCH_05839 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 1982145 6877973 Lferr_1985 Acidithiobacillus ferrooxidans ATCC 53993 serine-type D-Ala-D-Ala carboxypeptidase YP_002220409.1 1981192 R 380394 CDS YP_002220410.1 198284089 6877974 1982319..1983074 1 NC_011206.1 PFAM: protein of unknown function DUF81; KEGG: tbd:Tbd_2380 hypothetical protein; hypothetical protein 1983074 6877974 Lferr_1986 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220410.1 1982319 D 380394 CDS YP_002220411.1 198284090 6877975 1983090..1984097 1 NC_011206.1 PFAM: O-methyltransferase family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_3231 methyltransferase type 12; type 11 methyltransferase 1984097 6877975 Lferr_1987 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002220411.1 1983090 D 380394 CDS YP_002220412.1 198284091 6877977 complement(1984446..1988297) 1 NC_011206.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1988297 6877977 Lferr_1988 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylformylglycinamidine synthase YP_002220412.1 1984446 R 380394 CDS YP_002220413.1 198284092 6877978 complement(1988368..1989090) 1 NC_011206.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1989090 6877978 Lferr_1989 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_002220413.1 1988368 R 380394 CDS YP_002220414.1 198284093 6877979 complement(1989087..1990394) 1 NC_011206.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: sfu:Sfum_0660 adenylosuccinate lyase; adenylosuccinate lyase 1990394 6877979 Lferr_1990 Acidithiobacillus ferrooxidans ATCC 53993 adenylosuccinate lyase YP_002220414.1 1989087 R 380394 CDS YP_002220415.1 198284094 6877980 complement(1990391..1991524) 1 NC_011206.1 KEGG: tbd:Tbd_1099 uncharacterized lipoprotein; hypothetical protein 1991524 6877980 Lferr_1991 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220415.1 1990391 R 380394 CDS YP_002220416.1 198284095 6877981 complement(1991562..1992437) 1 NC_011206.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: noc:Noc_2524 dihydrodipicolinate synthase subfamily; dihydrodipicolinate synthase 1992437 6877981 Lferr_1992 Acidithiobacillus ferrooxidans ATCC 53993 dihydrodipicolinate synthase YP_002220416.1 1991562 R 380394 CDS YP_002220417.1 198284096 6877983 complement(1992710..1993387) 1 NC_011206.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bpt:Bpet3230 hemolysin III; hemolysin III family channel protein 1993387 6877983 Lferr_1993 Acidithiobacillus ferrooxidans ATCC 53993 hemolysin III family channel protein YP_002220417.1 1992710 R 380394 CDS YP_002220418.1 198284097 6877984 complement(1993438..1994766) 1 NC_011206.1 PFAM: cell wall hydrolase/autolysin; KEGG: noc:Noc_0337 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1994766 6877984 Lferr_1994 Acidithiobacillus ferrooxidans ATCC 53993 N-acetylmuramoyl-L-alanine amidase YP_002220418.1 1993438 R 380394 CDS YP_002220419.1 198284098 6877985 complement(1994852..1995286) 1 NC_011206.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nmu:Nmul_A0053 thioredoxin; thioredoxin 1995286 6877985 Lferr_1995 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin YP_002220419.1 1994852 R 380394 CDS YP_002220420.1 198284099 6877986 complement(1995317..1995601) 1 NC_011206.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: eba:ebA1054 glutaredoxin protein; glutaredoxin 3 1995601 6877986 Lferr_1996 Acidithiobacillus ferrooxidans ATCC 53993 glutaredoxin 3 YP_002220420.1 1995317 R 380394 CDS YP_002220421.1 198284100 6877987 complement(1995601..1996026) 1 NC_011206.1 PFAM: Rhodanese domain protein; KEGG: azo:azo2810 hypothetical protein; rhodanese domain-containing protein 1996026 6877987 Lferr_1997 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002220421.1 1995601 R 380394 CDS YP_002220422.1 198284101 6877988 complement(1996030..1996251) 1 NC_011206.1 KEGG: dar:Daro_3342 hypothetical protein; hypothetical protein 1996251 6877988 Lferr_1998 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220422.1 1996030 R 380394 CDS YP_002220423.1 198284102 6877989 complement(1996258..1999536) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: tcx:Tcr_0455 acriflavin resistance protein; acriflavin resistance protein 1999536 6877989 Lferr_1999 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002220423.1 1996258 R 380394 CDS YP_002220424.1 198284103 6877990 complement(1999529..2000611) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tcx:Tcr_0454 secretion protein HlyD; RND family efflux transporter MFP subunit 2000611 6877990 Lferr_2000 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220424.1 1999529 R 380394 CDS YP_002220425.1 198284104 6877991 complement(2000608..2002029) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: tcx:Tcr_0453 outer membrane efflux protein; outer membrane efflux protein 2002029 6877991 Lferr_2001 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220425.1 2000608 R 380394 CDS YP_002220426.1 198284105 6877992 complement(2002277..2002579) 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: tbd:Tbd_2395 putative transcriptional regulator, ArsR family; arsR family transcriptional regulator 2002579 6877992 Lferr_2002 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002220426.1 2002277 R 380394 CDS YP_002220427.1 198284106 6877994 complement(2003301..2004914) 1 NC_011206.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: eba:ebA2607 type I site-specific deoxyribonuclease, methylase subunit; type I restriction-modification system, M subunit 2004914 6877994 Lferr_2003 Acidithiobacillus ferrooxidans ATCC 53993 type I restriction-modification system, M subunit YP_002220427.1 2003301 R 380394 CDS YP_002220428.1 198284107 6877995 complement(2004911..2005114) 1 NC_011206.1 KEGG: dac:Daci_2436 hypothetical protein; hypothetical protein 2005114 6877995 Lferr_2004 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220428.1 2004911 R 380394 CDS YP_002220429.1 198284108 6877996 complement(2005111..2006289) 1 NC_011206.1 anticodon nuclease 2006289 6877996 Lferr_2005 Acidithiobacillus ferrooxidans ATCC 53993 anticodon nuclease YP_002220429.1 2005111 R 380394 CDS YP_002220430.1 198284109 6877997 complement(2006286..2006381) 1 NC_011206.1 hypothetical protein 2006381 6877997 Lferr_2006 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220430.1 2006286 R 380394 CDS YP_002220431.1 198284110 6877998 complement(2006381..2009545) 1 NC_011206.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mfa:Mfla_1218 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 2009545 6877998 Lferr_2007 Acidithiobacillus ferrooxidans ATCC 53993 DEAD/DEAH box helicase YP_002220431.1 2006381 R 380394 CDS YP_002220432.1 198284111 6877999 complement(2009542..2010330) 1 NC_011206.1 KEGG: mfa:Mfla_1217 hypothetical protein; hypothetical protein 2010330 6877999 Lferr_2008 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220432.1 2009542 R 380394 CDS YP_002220433.1 198284112 6878000 complement(2010327..2011598) 1 NC_011206.1 PFAM: restriction modification system DNA specificity domain; KEGG: mfa:Mfla_1216 restriction modification system DNA specificity domain; restriction modification system DNA specificity protein 2011598 6878000 Lferr_2009 Acidithiobacillus ferrooxidans ATCC 53993 restriction modification system DNA specificity protein YP_002220433.1 2010327 R 380394 CDS YP_002220434.1 198284113 6878001 complement(2011595..2011951) 1 NC_011206.1 hypothetical protein 2011951 6878001 Lferr_2010 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220434.1 2011595 R 380394 CDS YP_002220435.1 198284114 6878002 complement(2011948..2012562) 1 NC_011206.1 KEGG: dde:Dde_2494 hypothetical protein; transcriptional regulator 2012562 6878002 Lferr_2011 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002220435.1 2011948 R 380394 CDS YP_002220436.1 198284115 6878003 complement(2012555..2015653) 1 NC_011206.1 KEGG: eba:ebA2612 type I restriction-modification system endonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 2015653 6878003 Lferr_2012 Acidithiobacillus ferrooxidans ATCC 53993 HsdR family type I site-specific deoxyribonuclease YP_002220436.1 2012555 R 380394 CDS YP_002220437.1 198284116 6878004 complement(2015946..2017418) 1 NC_011206.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: abo:ABO_2465 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 2017418 6878004 Lferr_2013 Acidithiobacillus ferrooxidans ATCC 53993 UbiD family decarboxylase YP_002220437.1 2015946 R 380394 CDS YP_002220438.1 198284117 6878005 complement(2017443..2018315) 1 NC_011206.1 KEGG: noc:Noc_1486 ABC-type phosphate/phosphonate transport system periplasmic component; phosphate/phosphonate ABC transporter substrate-binding protein 2018315 6878005 Lferr_2014 Acidithiobacillus ferrooxidans ATCC 53993 phosphate/phosphonate ABC transporter substrate-binding protein YP_002220438.1 2017443 R 380394 CDS YP_002220439.1 198284118 6878006 complement(2018328..2018774) 1 NC_011206.1 PFAM: Sterol-binding domain protein; KEGG: aae:aq_090 hypothetical protein; Sterol-binding domain-containing protein 2018774 6878006 Lferr_2015 Acidithiobacillus ferrooxidans ATCC 53993 Sterol-binding domain-containing protein YP_002220439.1 2018328 R 380394 CDS YP_002220440.1 198284119 6878007 complement(2018831..2019577) 1 NC_011206.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: tbd:Tbd_0522 HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD-binding protein 2019577 6878007 Lferr_2016 Acidithiobacillus ferrooxidans ATCC 53993 UBA/THIF-type NAD/FAD-binding protein YP_002220440.1 2018831 R 380394 CDS YP_002220441.1 198284120 6878008 complement(2019577..2020392) 1 NC_011206.1 PFAM: TatD-related deoxyribonuclease; KEGG: xcv:XCV1526 putative TatD related DNase; TatD-like deoxyribonuclease 2020392 6878008 Lferr_2017 Acidithiobacillus ferrooxidans ATCC 53993 TatD-like deoxyribonuclease YP_002220441.1 2019577 R 380394 CDS YP_002220442.1 198284121 6878009 2020525..2021754 1 NC_011206.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: cyb:CYB_0780 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; ubiquinone biosynthesis hydroxylase 2021754 6878009 Lferr_2018 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinone biosynthesis hydroxylase YP_002220442.1 2020525 D 380394 CDS YP_002220443.1 198284122 6878010 2021744..2022931 1 NC_011206.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: xfa:XF0834 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; ubiquinone biosynthesis hydroxylase 2022931 6878010 Lferr_2019 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinone biosynthesis hydroxylase YP_002220443.1 2021744 D 380394 CDS YP_002220444.1 198284123 6878011 2022943..2023206 1 NC_011206.1 PFAM: protein of unknown function DUF526; KEGG: cvi:CV_4001 hypothetical protein; hypothetical protein 2023206 6878011 Lferr_2020 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220444.1 2022943 D 380394 CDS YP_002220445.1 198284124 6878012 2023210..2024031 1 NC_011206.1 PFAM: magnesium chelatase ChlI subunit; KEGG: psa:PST_0500 magnesium chelatase, subunit D/I family; magnesium chelatase ChlI subunit 2024031 6878012 Lferr_2021 Acidithiobacillus ferrooxidans ATCC 53993 magnesium chelatase ChlI subunit YP_002220445.1 2023210 D 380394 CDS YP_002220446.1 198284125 6878013 2024173..2026017 1 NC_011206.1 KEGG: bxe:Bxe_A1802 hypothetical protein; hypothetical protein 2026017 6878013 Lferr_2022 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220446.1 2024173 D 380394 CDS YP_002220447.1 198284126 6878014 2026180..2026680 1 NC_011206.1 PFAM: transposase IS3/IS911 family protein; KEGG: shw:Sputw3181_2067 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2026680 6878014 Lferr_2023 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS3/IS911 family protein YP_002220447.1 2026180 D 380394 CDS YP_002220448.1 198284127 6878015 2026815..2027165 1 NC_011206.1 KEGG: sbl:Sbal_4350 integrase, catalytic region; integrase catalytic subunit 2027165 6878015 Lferr_2024 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002220448.1 2026815 D 380394 CDS YP_002220449.1 198284128 6878017 2029689..2030582 1 NC_011206.1 PFAM: integrase domain protein SAM domain protein; KEGG: pol:Bpro_0711 phage integrase; integrase domain-containing SAM domain-containing protein 2030582 6878017 Lferr_2026 Acidithiobacillus ferrooxidans ATCC 53993 integrase domain-containing SAM domain-containing protein YP_002220449.1 2029689 D 380394 CDS YP_002220450.1 198284129 6878018 complement(2030631..2031458) 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p1B267 transposition helper protein; IstB domain-containing ATP-binding protein 2031458 6878018 Lferr_2027 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002220450.1 2030631 R 380394 CDS YP_002220451.1 198284130 6878019 complement(2031455..2032939) 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: eba:p2A256 transposase; integrase catalytic subunit 2032939 6878019 Lferr_2028 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002220451.1 2031455 R 380394 CDS YP_002220452.1 198284131 6878021 2033439..2034380 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0712 phage integrase; integrase family protein 2034380 6878021 Lferr_2030 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002220452.1 2033439 D 380394 CDS YP_002220453.1 198284132 6878022 2034373..2035371 1 NC_011206.1 PFAM: integrase family protein; KEGG: pol:Bpro_0713 phage integrase; integrase family protein 2035371 6878022 Lferr_2031 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002220453.1 2034373 D 380394 CDS YP_002220454.1 198284133 6878023 complement(2035446..2036309) 1 NC_011206.1 KEGG: rme:Rmet_6335 integrase, catalytic region; integrase catalytic subunit 2036309 6878023 Lferr_2032 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002220454.1 2035446 R 380394 CDS YP_002220455.1 198284134 6878024 complement(2036440..2036988) 1 NC_011206.1 KEGG: bxe:Bxe_C0711 hypothetical protein; hypothetical protein 2036988 6878024 Lferr_2033 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220455.1 2036440 R 380394 CDS YP_002220456.1 198284135 6878025 complement(2037111..2038118) 1 NC_011206.1 KEGG: lpf:lpl2288 hypothetical protein; hypothetical protein 2038118 6878025 Lferr_2034 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220456.1 2037111 R 380394 CDS YP_002220457.1 198284136 6878026 2038987..2039340 1 NC_011206.1 KEGG: mpt:Mpe_B0470 hypothetical protein; hypothetical protein 2039340 6878026 Lferr_2035 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220457.1 2038987 D 380394 CDS YP_002220458.1 198284137 6878027 complement(2039633..2039908) 1 NC_011206.1 KEGG: rme:Rmet_5954 integrase, catalytic region; hypothetical protein 2039908 6878027 Lferr_2036 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220458.1 2039633 R 380394 CDS YP_002220459.1 198284138 6878028 2040224..2040415 1 NC_011206.1 hypothetical protein 2040415 6878028 Lferr_2037 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220459.1 2040224 D 380394 CDS YP_002220460.1 198284139 6878029 2040904..2042304 1 NC_011206.1 KEGG: gme:Gmet_1436 hypothetical protein; hypothetical protein 2042304 6878029 Lferr_2038 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220460.1 2040904 D 380394 CDS YP_002220461.1 198284140 6878030 2042314..2044743 1 NC_011206.1 PFAM: DNA primase small subunit; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ecs:ECs1305 hypothetical protein; type III restriction protein res subunit 2044743 6878030 Lferr_2039 Acidithiobacillus ferrooxidans ATCC 53993 type III restriction protein res subunit YP_002220461.1 2042314 D 380394 CDS YP_002220462.1 198284141 6878031 complement(2045280..2045765) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0582 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2045765 6878031 Lferr_2040 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002220462.1 2045280 R 380394 CDS YP_002220463.1 198284142 6878032 complement(2045801..2045995) 1 NC_011206.1 hypothetical protein 2045995 6878032 Lferr_2041 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220463.1 2045801 R 380394 CDS YP_002220464.1 198284143 6878033 complement(2045999..2046475) 1 NC_011206.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2046475 6878033 Lferr_2042 Acidithiobacillus ferrooxidans ATCC 53993 NADH dehydrogenase subunit B YP_002220464.1 2045999 R 380394 CDS YP_002220465.1 198284144 6878034 complement(2046552..2048729) 1 NC_011206.1 PFAM: PEP-utilising protein mobile region; KEGG: nmu:Nmul_A1613 pyruvate, water dikinase; PEP-utilizing protein mobile subunit 2048729 6878034 Lferr_2043 Acidithiobacillus ferrooxidans ATCC 53993 PEP-utilizing protein mobile subunit YP_002220465.1 2046552 R 380394 CDS YP_002220466.1 198284145 6878035 complement(2048818..2049480) 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; KEGG: eba:ebA3781 transposition helper protein; IstB domain-containing ATP-binding protein 2049480 6878035 Lferr_2044 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002220466.1 2048818 R 380394 CDS YP_002220467.1 198284146 6878036 2049759..2050040 1 NC_011206.1 PFAM: protein of unknown function DUF497; KEGG: gur:Gura_1009 protein of unknown function DUF497; hypothetical protein 2050040 6878036 Lferr_2045 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220467.1 2049759 D 380394 CDS YP_002220468.1 198284147 6878037 2050037..2050279 1 NC_011206.1 KEGG: gur:Gura_0787 CopG domain protein DNA-binding domain protein; CopG domain-containing DNA-binding domain-containing protein 2050279 6878037 Lferr_2046 Acidithiobacillus ferrooxidans ATCC 53993 CopG domain-containing DNA-binding domain-containing protein YP_002220468.1 2050037 D 380394 CDS YP_002220469.1 198284148 6878038 2050487..2051245 1 NC_011206.1 KEGG: mbu:Mbur_0157 AAA ATPase; transcriptional regulator 2051245 6878038 Lferr_2047 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002220469.1 2050487 D 380394 CDS YP_002220470.1 198284149 6878039 2051336..2052133 1 NC_011206.1 KEGG: bbt:BBta_1233 hypothetical protein; hypothetical protein 2052133 6878039 Lferr_2048 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220470.1 2051336 D 380394 CDS YP_002220471.1 198284150 6878040 complement(2052805..2054280) 1 NC_011206.1 PFAM: plasmid recombination protein; KEGG: tva:TVAG_110290 viral A-type inclusion protein, putative Pfam: XLF HSBP1 Baculo_PEP_C Ribosomal_LX EzrA Syntaxin Syntaxin-6_N TSC22 Rad50_zn_hook Spectrin Laminin_I Prefoldin THOC7 TBPIP Seryl_tRNA_N DUF593 DUF148 TACC PspA_IM30 Rab5-bind M Myosin_tail_1 Troponin Filament Tektin Tup_N Phage_GP20 GBP_C DUF827 MAP65_ASE1 Alpha-2-MRAP_C Fez1 BRE1 Prefoldin_2 FlgM Ribosomal_L30_N Laminin_II Microtub_assoc; plasmid recombination protein 2054280 6878040 Lferr_2049 Acidithiobacillus ferrooxidans ATCC 53993 plasmid recombination protein YP_002220471.1 2052805 R 380394 CDS YP_002220472.1 198284151 6878041 complement(2054512..2055513) 1 NC_011206.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nar:Saro_3052 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2055513 6878041 Lferr_2050 Acidithiobacillus ferrooxidans ATCC 53993 cation diffusion facilitator family transporter YP_002220472.1 2054512 R 380394 CDS YP_002220473.1 198284152 6878042 2055613..2056089 1 NC_011206.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: vei:Veis_2831 putative transcriptional regulator, MerR family; merR family transcriptional regulator 2056089 6878042 Lferr_2051 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002220473.1 2055613 D 380394 CDS YP_002220474.1 198284153 6878043 complement(2056102..2056752) 1 NC_011206.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: aeh:Mlg_0626 methyltransferase type 11; type 11 methyltransferase 2056752 6878043 Lferr_2052 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002220474.1 2056102 R 380394 CDS YP_002220475.1 198284154 6878044 complement(2056769..2057260) 1 NC_011206.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: bte:BTH_I3307 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon 2057260 6878044 Lferr_2053 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F1 subunit epsilon YP_002220475.1 2056769 R 380394 CDS YP_002220476.1 198284155 6878045 complement(2057385..2058011) 1 NC_011206.1 PFAM: cation efflux protein; KEGG: noc:Noc_1534 cation efflux protein; cation efflux protein 2058011 6878045 Lferr_2054 Acidithiobacillus ferrooxidans ATCC 53993 cation efflux protein YP_002220476.1 2057385 R 380394 CDS YP_002220477.1 198284156 6878046 2058187..2058399 1 NC_011206.1 hypothetical protein 2058399 6878046 Lferr_2055 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220477.1 2058187 D 380394 CDS YP_002220478.1 198284157 6878047 complement(2058548..2058856) 1 NC_011206.1 hypothetical protein 2058856 6878047 Lferr_2056 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220478.1 2058548 R 380394 CDS YP_002220479.1 198284158 6878048 complement(2058972..2059334) 1 NC_011206.1 KEGG: tbd:Tbd_1332 hypothetical protein; hypothetical protein 2059334 6878048 Lferr_2057 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220479.1 2058972 R 380394 CDS YP_002220480.1 198284159 6878049 complement(2059463..2060218) 1 NC_011206.1 PFAM: cytochrome B561; KEGG: tbd:Tbd_0139 cytochrome b, putative; cytochrome B561 2060218 6878049 Lferr_2058 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome B561 YP_002220480.1 2059463 R 380394 CDS YP_002220481.1 198284160 6878050 complement(2060277..2060966) 1 NC_011206.1 PFAM: protein of unknown function DUF124; KEGG: mlo:mlr0194 hypothetical protein; hypothetical protein 2060966 6878050 Lferr_2059 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220481.1 2060277 R 380394 CDS YP_002220482.1 198284161 6878051 complement(2061034..2064144) 1 NC_011206.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mmr:Mmar10_0178 putative cation efflux system transmembrane protein; CzcA family heavy metal efflux pump 2064144 6878051 Lferr_2060 Acidithiobacillus ferrooxidans ATCC 53993 CzcA family heavy metal efflux pump YP_002220482.1 2061034 R 380394 CDS YP_002220483.1 198284162 6878052 complement(2064137..2065585) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aha:AHA_2962 copper/silver resistance periplasmic protein; RND family efflux transporter MFP subunit 2065585 6878052 Lferr_2061 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002220483.1 2064137 R 380394 CDS YP_002220484.1 198284163 6878053 complement(2065582..2066892) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: lpc:LPC_2241 hypothetical protein; outer membrane efflux protein 2066892 6878053 Lferr_2062 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220484.1 2065582 R 380394 CDS YP_002220485.1 198284164 6878054 2066989..2067501 1 NC_011206.1 hypothetical protein 2067501 6878054 Lferr_2063 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220485.1 2066989 D 380394 CDS YP_002220486.1 198284165 6878056 2068038..2068301 1 NC_011206.1 KEGG: pna:Pnap_0935 hypothetical protein; hypothetical protein 2068301 6878056 Lferr_2065 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220486.1 2068038 D 380394 CDS YP_002220487.1 198284166 6878057 2068441..2070465 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: tbd:Tbd_2740 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase 2070465 6878057 Lferr_2066 Acidithiobacillus ferrooxidans ATCC 53993 copper-translocating P-type ATPase YP_002220487.1 2068441 D 380394 CDS YP_002220488.1 198284167 6878059 complement(2071072..2071383) 1 NC_011206.1 KEGG: rme:Rmet_1360 hypothetical protein; hypothetical protein 2071383 6878059 Lferr_2068 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220488.1 2071072 R 380394 CDS YP_002220489.1 198284168 6878061 2072276..2072557 1 NC_011206.1 hypothetical protein 2072557 6878061 Lferr_2070 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220489.1 2072276 D 380394 CDS YP_002220490.1 198284169 6878062 2072521..2073012 1 NC_011206.1 hypothetical protein 2073012 6878062 Lferr_2071 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220490.1 2072521 D 380394 CDS YP_002220491.1 198284170 6878064 2074194..2074589 1 NC_011206.1 PFAM: protein of unknown function DUF302; KEGG: tbd:Tbd_2156 hypothetical protein; hypothetical protein 2074589 6878064 Lferr_2073 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220491.1 2074194 D 380394 CDS YP_002220492.1 198284171 6878065 2074651..2074857 1 NC_011206.1 PFAM: Heavy metal transport/detoxification protein; KEGG: ttj:TTHA1718 heavy metal binding protein; heavy metal transport/detoxification protein 2074857 6878065 Lferr_2074 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal transport/detoxification protein YP_002220492.1 2074651 D 380394 CDS YP_002220493.1 198284172 6878066 2074862..2075101 1 NC_011206.1 PFAM: glutaredoxin; glutaredoxin 2; KEGG: oan:Oant_3239 glutaredoxin; glutaredoxin 2075101 6878066 Lferr_2075 Acidithiobacillus ferrooxidans ATCC 53993 glutaredoxin YP_002220493.1 2074862 D 380394 CDS YP_002220494.1 198284173 6878067 2075126..2075548 1 NC_011206.1 PFAM: cytochrome c class I; KEGG: rfr:Rfer_2468 cytochrome c, class I; cytochrome c class I 2075548 6878067 Lferr_2076 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c class I YP_002220494.1 2075126 D 380394 CDS YP_002220495.1 198284174 6878068 complement(2075947..2076684) 1 NC_011206.1 KEGG: gur:Gura_3178 hypothetical protein; hypothetical protein 2076684 6878068 Lferr_2077 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220495.1 2075947 R 380394 CDS YP_002220496.1 198284175 6878069 complement(2076870..2078471) 1 NC_011206.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_5112 Na+/H+ antiporter; Na+/H+ antiporter 2078471 6878069 Lferr_2078 Acidithiobacillus ferrooxidans ATCC 53993 Na+/H+ antiporter YP_002220496.1 2076870 R 380394 CDS YP_002220497.1 198284176 6878070 complement(2078592..2078858) 1 NC_011206.1 hypothetical protein 2078858 6878070 Lferr_2079 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220497.1 2078592 R 380394 CDS YP_002220498.1 198284177 6878071 2079555..2080874 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2080874 6878071 Lferr_2080 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220498.1 2079555 D 380394 CDS YP_002220499.1 198284178 6878072 2080996..2081310 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2081310 6878072 Lferr_2081 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220499.1 2080996 D 380394 CDS YP_002220500.1 198284179 6878073 complement(2081672..2083291) 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C6568 putative amino acid transporter; amino acid permease-associated protein 2083291 6878073 Lferr_2082 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002220500.1 2081672 R 380394 CDS YP_002220501.1 198284180 6878074 complement(2083316..2083798) 1 NC_011206.1 hypothetical protein 2083798 6878074 Lferr_2083 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220501.1 2083316 R 380394 CDS YP_002220502.1 198284181 6878075 complement(2083801..2084160) 1 NC_011206.1 hypothetical protein 2084160 6878075 Lferr_2084 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220502.1 2083801 R 380394 CDS YP_002220503.1 198284182 6878076 complement(2084219..2084518) 1 NC_011206.1 hypothetical protein 2084518 6878076 Lferr_2085 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220503.1 2084219 R 380394 CDS YP_002220504.1 198284183 6878077 complement(2084515..2084886) 1 NC_011206.1 PFAM: nitrogen regulatory protein P-II; KEGG: bbr:BB2510 nitrogen regulatory protein; nitrogen regulatory protein P-II 2084886 6878077 Lferr_2086 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen regulatory protein P-II YP_002220504.1 2084515 R 380394 CDS YP_002220505.1 198284184 6878078 complement(2084944..2086134) 1 NC_011206.1 KEGG: mrd:Mrad2831_2268 hypothetical protein; hypothetical protein 2086134 6878078 Lferr_2087 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220505.1 2084944 R 380394 CDS YP_002220506.1 198284185 6878079 complement(2086214..2087212) 1 NC_011206.1 KEGG: pmy:Pmen_3679 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; glutamate 5-kinase 2087212 6878079 Lferr_2088 Acidithiobacillus ferrooxidans ATCC 53993 glutamate 5-kinase YP_002220506.1 2086214 R 380394 CDS YP_002220507.1 198284186 6878080 complement(2087366..2088922) 1 NC_011206.1 PFAM: RimK domain protein ATP-grasp; KEGG: pau:PA14_39390 ribosomal protein S6 modification enzyme; RimK domain-containing protein 2088922 6878080 Lferr_2089 Acidithiobacillus ferrooxidans ATCC 53993 RimK domain-containing protein YP_002220507.1 2087366 R 380394 CDS YP_002220508.1 198284187 6878082 2089336..2089668 1 NC_011206.1 KEGG: bpt:Bpet1150 hypothetical protein; hypothetical protein 2089668 6878082 Lferr_2091 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220508.1 2089336 D 380394 CDS YP_002220509.1 198284188 6878083 2089659..2090006 1 NC_011206.1 PFAM: IS66 Orf2 family protein; KEGG: bte:BTH_I2736 TnpB protein; IS66 Orf2 family protein 2090006 6878083 Lferr_2092 Acidithiobacillus ferrooxidans ATCC 53993 IS66 Orf2 family protein YP_002220509.1 2089659 D 380394 CDS YP_002220510.1 198284189 6878084 2090056..2091693 1 NC_011206.1 PFAM: transposase IS66; KEGG: bte:BTH_I1449 TnpC protein; transposase IS66 2091693 6878084 Lferr_2093 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS66 YP_002220510.1 2090056 D 380394 CDS YP_002220511.1 198284190 6878086 complement(2091977..2092168) 1 NC_011206.1 hypothetical protein 2092168 6878086 Lferr_2095 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220511.1 2091977 R 380394 CDS YP_002220512.1 198284191 6878087 complement(2092206..2092487) 1 NC_011206.1 PFAM: histone family protein DNA-binding protein; KEGG: sse:Ssed_0600 histone family protein DNA-binding protein; histone family protein DNA-binding protein 2092487 6878087 Lferr_2096 Acidithiobacillus ferrooxidans ATCC 53993 histone family protein DNA-binding protein YP_002220512.1 2092206 R 380394 CDS YP_002220513.1 198284192 6878088 complement(2092433..2092657) 1 NC_011206.1 KEGG: rpc:RPC_2258 hypothetical protein; hypothetical protein 2092657 6878088 Lferr_2097 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220513.1 2092433 R 380394 CDS YP_002220514.1 198284193 6878089 complement(2092799..2093110) 1 NC_011206.1 hypothetical protein 2093110 6878089 Lferr_2098 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220514.1 2092799 R 380394 CDS YP_002220515.1 198284194 6878090 complement(2093110..2093277) 1 NC_011206.1 hypothetical protein 2093277 6878090 Lferr_2099 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220515.1 2093110 R 380394 CDS YP_002220516.1 198284195 6878091 complement(2093274..2093897) 1 NC_011206.1 KEGG: bbr:BB3919 potassium-transporting ATPase subunit C; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 2093897 6878091 Lferr_2100 Acidithiobacillus ferrooxidans ATCC 53993 potassium-transporting ATPase subunit C YP_002220516.1 2093274 R 380394 CDS YP_002220517.1 198284196 6878092 complement(2093910..2095979) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: eca:ECA1341 potassium-transporting ATPase subunit B; K+-transporting ATPase subunit B 2095979 6878092 Lferr_2101 Acidithiobacillus ferrooxidans ATCC 53993 K+-transporting ATPase subunit B YP_002220517.1 2093910 R 380394 CDS YP_002220518.1 198284197 6878093 complement(2095993..2097744) 1 NC_011206.1 KEGG: rme:Rmet_0038 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 2097744 6878093 Lferr_2102 Acidithiobacillus ferrooxidans ATCC 53993 potassium-transporting ATPase subunit A YP_002220518.1 2095993 R 380394 CDS YP_002220519.1 198284198 6878094 complement(2097741..2097833) 1 NC_011206.1 TIGRFAM: K+-transporting ATPase, F subunit; K+-transporting ATPase subunit F 2097833 6878094 Lferr_2103 Acidithiobacillus ferrooxidans ATCC 53993 K+-transporting ATPase subunit F YP_002220519.1 2097741 R 380394 CDS YP_002220520.1 198284199 6878095 complement(2098130..2099881) 1 NC_011206.1 KEGG: cvi:CV_1599 potassium-transporting ATPase subunit A; TIGRFAM: potassium-transporting ATPase, A subunit; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 2099881 6878095 Lferr_2104 Acidithiobacillus ferrooxidans ATCC 53993 potassium-transporting ATPase subunit A YP_002220520.1 2098130 R 380394 CDS YP_002220521.1 198284200 6878097 2100606..2101040 1 NC_011206.1 PFAM: MerC mercury resistance protein; KEGG: neu:NE0840 putative mercury transport protein; mercury transport protein MerC 2101040 6878097 Lferr_2106 Acidithiobacillus ferrooxidans ATCC 53993 mercury transport protein MerC YP_002220521.1 2100606 D 380394 CDS YP_002220522.1 198284201 6878098 2101066..2102709 1 NC_011206.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: ppw:PputW619_2338 mercuric reductase; mercuric reductase 2102709 6878098 Lferr_2107 Acidithiobacillus ferrooxidans ATCC 53993 mercuric reductase YP_002220522.1 2101066 D 380394 CDS YP_002220523.1 198284202 6878099 2102733..2104811 1 NC_011206.1 PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: nha:Nham_0995 glucan 1,4-alpha-glucosidase; glucan 1,4-alpha-glucosidase 2104811 6878099 Lferr_2108 Acidithiobacillus ferrooxidans ATCC 53993 glucan 1,4-alpha-glucosidase YP_002220523.1 2102733 D 380394 CDS YP_002220524.1 198284203 6878100 2104814..2105179 1 NC_011206.1 TIGRFAM: mercuric resistence transcriptional repressor protein MerD; PFAM: regulatory protein MerR; KEGG: pap:PSPA7_0105 mercuric resistence transcriptional repressor protein MerD; transcriptional regulator MerD 2105179 6878100 Lferr_2109 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator MerD YP_002220524.1 2104814 D 380394 CDS YP_002220525.1 198284204 6878103 complement(2106173..2106661) 1 NC_011206.1 hypothetical protein 2106661 6878103 Lferr_2112 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220525.1 2106173 R 380394 CDS YP_002220526.1 198284205 6878104 complement(2106606..2106932) 1 NC_011206.1 KEGG: ttj:TTHA0655 hypothetical protein; hypothetical protein 2106932 6878104 Lferr_2113 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220526.1 2106606 R 380394 CDS YP_002220527.1 198284206 6878105 complement(2106932..2107120) 1 NC_011206.1 hypothetical protein 2107120 6878105 Lferr_2114 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220527.1 2106932 R 380394 CDS YP_002220528.1 198284207 6878106 2108513..2109358 1 NC_011206.1 KEGG: rme:Rmet_4832 hypothetical protein; hypothetical protein 2109358 6878106 Lferr_2115 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220528.1 2108513 D 380394 CDS YP_002220529.1 198284208 6878107 complement(2109779..2110081) 1 NC_011206.1 hypothetical protein 2110081 6878107 Lferr_2116 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220529.1 2109779 R 380394 CDS YP_002220530.1 198284209 6878108 complement(2110074..2110283) 1 NC_011206.1 KEGG: ppd:Ppro_0139 transposase, mutator family; hypothetical protein 2110283 6878108 Lferr_2117 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220530.1 2110074 R 380394 CDS YP_002220531.1 198284210 6878109 complement(2110345..2110704) 1 NC_011206.1 KEGG: mfa:Mfla_2286 hypothetical protein; hypothetical protein 2110704 6878109 Lferr_2118 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220531.1 2110345 R 380394 CDS YP_002220532.1 198284211 6878110 complement(2110776..2111042) 1 NC_011206.1 hypothetical protein 2111042 6878110 Lferr_2119 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220532.1 2110776 R 380394 CDS YP_002220533.1 198284212 6878111 complement(2111130..2111507) 1 NC_011206.1 hypothetical protein 2111507 6878111 Lferr_2120 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220533.1 2111130 R 380394 CDS YP_002220534.1 198284213 6878112 2111534..2111848 1 NC_011206.1 hypothetical protein 2111848 6878112 Lferr_2121 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220534.1 2111534 D 380394 CDS YP_002220535.1 198284214 6878113 complement(2111929..2112546) 1 NC_011206.1 KEGG: pol:Bpro_0109 hypothetical protein; hypothetical protein 2112546 6878113 Lferr_2122 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220535.1 2111929 R 380394 CDS YP_002220536.1 198284215 6878114 2112827..2113357 1 NC_011206.1 hypothetical protein 2113357 6878114 Lferr_2123 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220536.1 2112827 D 380394 CDS YP_002220537.1 198284216 6878115 complement(2113240..2113491) 1 NC_011206.1 hypothetical protein 2113491 6878115 Lferr_2124 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220537.1 2113240 R 380394 CDS YP_002220538.1 198284217 6878116 2113612..2113851 1 NC_011206.1 hypothetical protein 2113851 6878116 Lferr_2125 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220538.1 2113612 D 380394 CDS YP_002220539.1 198284218 6878117 2113868..2114329 1 NC_011206.1 KEGG: rme:Rmet_2832 hypothetical protein; hypothetical protein 2114329 6878117 Lferr_2126 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220539.1 2113868 D 380394 CDS YP_002220540.1 198284219 6878118 complement(2114365..2115813) 1 NC_011206.1 KEGG: pst:PSPTO_0053 hypothetical protein; hypothetical protein 2115813 6878118 Lferr_2127 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220540.1 2114365 R 380394 CDS YP_002220541.1 198284220 6878119 complement(2115810..2116805) 1 NC_011206.1 KEGG: acb:A1S_0212 hypothetical protein; hypothetical protein 2116805 6878119 Lferr_2128 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220541.1 2115810 R 380394 CDS YP_002220542.1 198284221 6878121 complement(2117403..2117717) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2117717 6878121 Lferr_2130 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220542.1 2117403 R 380394 CDS YP_002220543.1 198284222 6878122 complement(2117839..2119158) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2119158 6878122 Lferr_2131 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220543.1 2117839 R 380394 CDS YP_002220544.1 198284223 6878123 complement(2119232..2119843) 1 NC_011206.1 PFAM: TniB family protein; KEGG: psp:PSPPH_0182 transposition helper protein, truncated; TniB family protein 2119843 6878123 Lferr_2132 Acidithiobacillus ferrooxidans ATCC 53993 TniB family protein YP_002220544.1 2119232 R 380394 CDS YP_002220545.1 198284224 6878124 complement(2119840..2120715) 1 NC_011206.1 KEGG: msu:MS2016 hypothetical protein; hypothetical protein 2120715 6878124 Lferr_2133 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220545.1 2119840 R 380394 CDS YP_002220546.1 198284225 6878125 2120865..2122184 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2122184 6878125 Lferr_2134 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220546.1 2120865 D 380394 CDS YP_002220547.1 198284226 6878126 2122306..2122620 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2122620 6878126 Lferr_2135 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220547.1 2122306 D 380394 CDS YP_002220548.1 198284227 6878127 complement(2122756..2123724) 1 NC_011206.1 KEGG: pst:PSPTO_0058 transposase; transposase 2123724 6878127 Lferr_2136 Acidithiobacillus ferrooxidans ATCC 53993 transposase YP_002220548.1 2122756 R 380394 CDS YP_002220549.1 198284228 6878128 complement(2123768..2124457) 1 NC_011206.1 PFAM: TnsA endonuclease; KEGG: msu:MS2017 hypothetical protein; TnsA endonuclease 2124457 6878128 Lferr_2137 Acidithiobacillus ferrooxidans ATCC 53993 TnsA endonuclease YP_002220549.1 2123768 R 380394 CDS YP_002220550.1 198284229 6878130 complement(2125383..2125760) 1 NC_011206.1 KEGG: aae:aq_401 hypothetical protein; hypothetical protein 2125760 6878130 Lferr_2139 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220550.1 2125383 R 380394 CDS YP_002220551.1 198284230 6878131 complement(2126002..2126484) 1 NC_011206.1 PFAM: regulatory protein MerR; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator; merR family transcriptional regulator 2126484 6878131 Lferr_2140 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002220551.1 2126002 R 380394 CDS YP_002220552.1 198284231 6878132 complement(2126530..2126763) 1 NC_011206.1 PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 2126763 6878132 Lferr_2141 Acidithiobacillus ferrooxidans ATCC 53993 heavy metal transport/detoxification protein YP_002220552.1 2126530 R 380394 CDS YP_002220553.1 198284232 6878133 complement(2127088..2127207) 1 NC_011206.1 KEGG: rme:Rmet_1498 von Willebrand factor, type A; hypothetical protein 2127207 6878133 Lferr_2142 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220553.1 2127088 R 380394 CDS YP_002220554.1 198284233 6878134 complement(2127298..2127822) 1 NC_011206.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: lpc:LPC_1689 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2127822 6878134 Lferr_2143 Acidithiobacillus ferrooxidans ATCC 53993 Sel1 domain-containing protein repeat-containing protein YP_002220554.1 2127298 R 380394 CDS YP_002220555.1 198284234 6878135 complement(2127850..2129469) 1 NC_011206.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 2129469 prfC 6878135 prfC Acidithiobacillus ferrooxidans ATCC 53993 peptide chain release factor 3 YP_002220555.1 2127850 R 380394 CDS YP_002220556.1 198284235 6878136 complement(2129476..2129952) 1 NC_011206.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: xac:XAC3563 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 2129952 6878136 Lferr_2145 Acidithiobacillus ferrooxidans ATCC 53993 ribosomal-protein-alanine acetyltransferase YP_002220556.1 2129476 R 380394 CDS YP_002220557.1 198284236 6878137 complement(2129954..2130622) 1 NC_011206.1 PFAM: peptidase M22 glycoprotease; KEGG: noc:Noc_0917 peptidase M22, glycoprotease; peptidase M22 glycoprotease 2130622 6878137 Lferr_2146 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M22 glycoprotease YP_002220557.1 2129954 R 380394 CDS YP_002220558.1 198284237 6878138 complement(2130622..2132547) 1 NC_011206.1 SMART: helicase c2; DEAD-like helicases; KEGG: noc:Noc_1364 helicase C2; helicase c2 2132547 6878138 Lferr_2147 Acidithiobacillus ferrooxidans ATCC 53993 helicase c2 YP_002220558.1 2130622 R 380394 CDS YP_002220559.1 198284238 6878139 2132617..2132979 1 NC_011206.1 hypothetical protein 2132979 6878139 Lferr_2148 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220559.1 2132617 D 380394 CDS YP_002220560.1 198284239 6878140 complement(2133192..2134289) 1 NC_011206.1 PFAM: NLP/P60 protein; KEGG: bvi:Bcep1808_1793 NLP/P60 protein; NLP/P60 protein 2134289 6878140 Lferr_2149 Acidithiobacillus ferrooxidans ATCC 53993 NLP/P60 protein YP_002220560.1 2133192 R 380394 CDS YP_002220561.1 198284240 6878141 2134790..2136046 1 NC_011206.1 PFAM: Carbohydrate-selective porin OprB; KEGG: mag:amb3444 carbohydrate-selective porin; carbohydrate-selective porin OprB 2136046 6878141 Lferr_2150 Acidithiobacillus ferrooxidans ATCC 53993 carbohydrate-selective porin OprB YP_002220561.1 2134790 D 380394 CDS YP_002220562.1 198284241 6878142 2136079..2136366 1 NC_011206.1 PFAM: FeoA family protein; KEGG: dau:Daud_1952 FeoA family protein; FeoA family protein 2136366 6878142 Lferr_2151 Acidithiobacillus ferrooxidans ATCC 53993 FeoA family protein YP_002220562.1 2136079 D 380394 CDS YP_002220563.1 198284242 6878143 2136363..2138711 1 NC_011206.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rru:Rru_A2470 ferrous iron transport protein B; ferrous iron transport protein B 2138711 6878143 Lferr_2152 Acidithiobacillus ferrooxidans ATCC 53993 ferrous iron transport protein B YP_002220563.1 2136363 D 380394 CDS YP_002220564.1 198284243 6878144 2138708..2139007 1 NC_011206.1 hypothetical protein 2139007 6878144 Lferr_2153 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220564.1 2138708 D 380394 CDS YP_002220565.1 198284244 6878145 2139105..2139977 1 NC_011206.1 TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pla:Plav_1141 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; N-carbamoylputrescine amidase 2139977 6878145 Lferr_2154 Acidithiobacillus ferrooxidans ATCC 53993 N-carbamoylputrescine amidase YP_002220565.1 2139105 D 380394 CDS YP_002220566.1 198284245 6878146 2139970..2140722 1 NC_011206.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: mta:Moth_2164 peptidase C26; peptidase C26 2140722 6878146 Lferr_2155 Acidithiobacillus ferrooxidans ATCC 53993 peptidase C26 YP_002220566.1 2139970 D 380394 CDS YP_002220567.1 198284246 6878147 complement(2140719..2141366) 1 NC_011206.1 PFAM: SNARE associated Golgi protein; KEGG: azo:azo0922 DedA protein; hypothetical protein 2141366 6878147 Lferr_2156 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220567.1 2140719 R 380394 CDS YP_002220568.1 198284247 6878148 complement(2141398..2141754) 1 NC_011206.1 KEGG: mgm:Mmc1_2466 hypothetical protein; hypothetical protein 2141754 6878148 Lferr_2157 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220568.1 2141398 R 380394 CDS YP_002220569.1 198284248 6878149 complement(2141751..2142503) 1 NC_011206.1 KEGG: cbd:COXBU7E912_0817 glutamine amidotransferase, class I; GMP synthase 2142503 6878149 Lferr_2158 Acidithiobacillus ferrooxidans ATCC 53993 GMP synthase YP_002220569.1 2141751 R 380394 CDS YP_002220570.1 198284249 6878150 complement(2142505..2143431) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tcx:Tcr_1555 transcriptional regulator, LysR family; LysR family transcriptional regulator 2143431 6878150 Lferr_2159 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002220570.1 2142505 R 380394 CDS YP_002220571.1 198284250 6878151 2143516..2144118 1 NC_011206.1 hypothetical protein 2144118 6878151 Lferr_2160 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220571.1 2143516 D 380394 CDS YP_002220572.1 198284251 6878152 complement(2144140..2145285) 1 NC_011206.1 PFAM: aldo/keto reductase; KEGG: hma:rrnAC1858 aldo/keto reductase; aldo/keto reductase 2145285 6878152 Lferr_2161 Acidithiobacillus ferrooxidans ATCC 53993 aldo/keto reductase YP_002220572.1 2144140 R 380394 CDS YP_002220573.1 198284252 6878153 complement(2145282..2146496) 1 NC_011206.1 PFAM: histone deacetylase superfamily; KEGG: sil:SPO2177 acetoin utilization protein AcuC; histone deacetylase superfamily protein 2146496 6878153 Lferr_2162 Acidithiobacillus ferrooxidans ATCC 53993 histone deacetylase superfamily protein YP_002220573.1 2145282 R 380394 CDS YP_002220574.1 198284253 6878154 complement(2146493..2148988) 1 NC_011206.1 PFAM: von Willebrand factor type A; KEGG: rsq:Rsph17025_4066 hypothetical protein; hypothetical protein 2148988 6878154 Lferr_2163 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220574.1 2146493 R 380394 CDS YP_002220575.1 198284254 6878155 complement(2148998..2149813) 1 NC_011206.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: neu:NE1919 nitric oxide reductase NorQ protein; ATPase 2149813 6878155 Lferr_2164 Acidithiobacillus ferrooxidans ATCC 53993 ATPase YP_002220575.1 2148998 R 380394 CDS YP_002220576.1 198284255 6878156 complement(2149825..2150226) 1 NC_011206.1 hypothetical protein 2150226 6878156 Lferr_2165 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220576.1 2149825 R 380394 CDS YP_002220577.1 198284256 6878157 2150353..2150676 1 NC_011206.1 hypothetical protein 2150676 6878157 Lferr_2166 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220577.1 2150353 D 380394 CDS YP_002220578.1 198284257 6878158 complement(2150731..2151111) 1 NC_011206.1 hypothetical protein 2151111 6878158 Lferr_2167 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220578.1 2150731 R 380394 CDS YP_002220579.1 198284258 6878159 complement(2151164..2152171) 1 NC_011206.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: sso:SSO1060 lipoate protein ligase A, hypothetical (LplA-like1); biotin/lipoate A/B protein ligase 2152171 6878159 Lferr_2168 Acidithiobacillus ferrooxidans ATCC 53993 biotin/lipoate A/B protein ligase YP_002220579.1 2151164 R 380394 CDS YP_002220580.1 198284259 6878160 complement(2152176..2152589) 1 NC_011206.1 hypothetical protein 2152589 6878160 Lferr_2169 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220580.1 2152176 R 380394 CDS YP_002220581.1 198284260 6878161 complement(2152716..2154059) 1 NC_011206.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: aeh:Mlg_2498 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2154059 6878161 Lferr_2170 Acidithiobacillus ferrooxidans ATCC 53993 aromatic hydrocarbon degradation membrane protein YP_002220581.1 2152716 R 380394 CDS YP_002220582.1 198284261 6878162 complement(2154272..2155408) 1 NC_011206.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_1958 hypothetical protein; radical SAM protein 2155408 6878162 Lferr_2171 Acidithiobacillus ferrooxidans ATCC 53993 radical SAM protein YP_002220582.1 2154272 R 380394 CDS YP_002220583.1 198284262 6878163 complement(2155433..2156494) 1 NC_011206.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; Lycopene beta and epsilon cyclase; KEGG: aae:aq_121 hypothetical protein; geranylgeranyl reductase 2156494 6878163 Lferr_2172 Acidithiobacillus ferrooxidans ATCC 53993 geranylgeranyl reductase YP_002220583.1 2155433 R 380394 CDS YP_002220584.1 198284263 6878164 complement(2156491..2157561) 1 NC_011206.1 PFAM: biotin/lipoate A/B protein ligase; KEGG: aae:aq_1638 lipoate-protein ligase A; biotin/lipoate A/B protein ligase 2157561 6878164 Lferr_2173 Acidithiobacillus ferrooxidans ATCC 53993 biotin/lipoate A/B protein ligase YP_002220584.1 2156491 R 380394 CDS YP_002220585.1 198284264 6878165 complement(2157610..2158731) 1 NC_011206.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aae:aq_403 hypothetical protein; radical SAM protein 2158731 6878165 Lferr_2174 Acidithiobacillus ferrooxidans ATCC 53993 radical SAM protein YP_002220585.1 2157610 R 380394 CDS YP_002220586.1 198284265 6878166 complement(2158816..2159253) 1 NC_011206.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_402 glycine cleavage system protein H; glycine cleavage H-protein 2159253 6878166 Lferr_2175 Acidithiobacillus ferrooxidans ATCC 53993 glycine cleavage H-protein YP_002220586.1 2158816 R 380394 CDS YP_002220587.1 198284266 6878167 complement(2159309..2159707) 1 NC_011206.1 KEGG: psa:PST_0157 hypothetical protein; hypothetical protein 2159707 6878167 Lferr_2176 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220587.1 2159309 R 380394 CDS YP_002220588.1 198284267 6878168 complement(2159704..2160150) 1 NC_011206.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_944 glycine cleavage system protein H; glycine cleavage H-protein 2160150 6878168 Lferr_2177 Acidithiobacillus ferrooxidans ATCC 53993 glycine cleavage H-protein YP_002220588.1 2159704 R 380394 CDS YP_002220589.1 198284268 6878169 complement(2160219..2161130) 1 NC_011206.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: aae:aq_400 heterodisulfide reductase subunit B; CoB--CoM heterodisulfide reductase 2161130 6878169 Lferr_2178 Acidithiobacillus ferrooxidans ATCC 53993 CoB--CoM heterodisulfide reductase YP_002220589.1 2160219 R 380394 CDS YP_002220590.1 198284269 6878171 2161615..2162934 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2162934 6878171 Lferr_2180 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220590.1 2161615 D 380394 CDS YP_002220591.1 198284270 6878172 2163056..2163370 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2163370 6878172 Lferr_2181 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220591.1 2163056 D 380394 CDS YP_002220592.1 198284271 6878173 complement(2163921..2164739) 1 NC_011206.1 KEGG: aae:aq_397 hypothetical protein; hypothetical protein 2164739 6878173 Lferr_2182 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220592.1 2163921 R 380394 CDS YP_002220593.1 198284272 6878174 complement(2164729..2165784) 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_395 heterodisulfide reductase subunit A; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2165784 6878174 Lferr_2183 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002220593.1 2164729 R 380394 CDS YP_002220594.1 198284273 6878175 complement(2165797..2167140) 1 NC_011206.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sto:ST1874 hypothetical protein; hypothetical protein 2167140 6878175 Lferr_2184 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220594.1 2165797 R 380394 CDS YP_002220595.1 198284274 6878176 complement(2167151..2167837) 1 NC_011206.1 KEGG: aae:aq_391 hypothetical protein; hypothetical protein 2167837 6878176 Lferr_2185 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220595.1 2167151 R 380394 CDS YP_002220596.1 198284275 6878177 complement(2167901..2168371) 1 NC_011206.1 KEGG: mgm:Mmc1_3745 hypothetical protein; hypothetical protein 2168371 6878177 Lferr_2186 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220596.1 2167901 R 380394 CDS YP_002220597.1 198284276 6878178 complement(2168415..2168645) 1 NC_011206.1 PFAM: SirA family protein; KEGG: tbd:Tbd_0574 hypothetical protein; SirA family protein 2168645 6878178 Lferr_2187 Acidithiobacillus ferrooxidans ATCC 53993 SirA family protein YP_002220597.1 2168415 R 380394 CDS YP_002220598.1 198284277 6878179 complement(2168769..2169098) 1 NC_011206.1 PFAM: Rhodanese domain protein; KEGG: tbd:Tbd_0573 rhodanese-like protein; rhodanese domain-containing protein 2169098 6878179 Lferr_2188 Acidithiobacillus ferrooxidans ATCC 53993 rhodanese domain-containing protein YP_002220598.1 2168769 R 380394 CDS YP_002220599.1 198284278 6878180 complement(2169159..2170187) 1 NC_011206.1 KEGG: pmy:Pmen_2766 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2170187 6878180 Lferr_2189 Acidithiobacillus ferrooxidans ATCC 53993 molybdenum cofactor biosynthesis protein A YP_002220599.1 2169159 R 380394 CDS YP_002220600.1 198284279 6878181 2170458..2170763 1 NC_011206.1 hypothetical protein 2170763 6878181 Lferr_2190 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220600.1 2170458 D 380394 CDS YP_002220601.1 198284280 6878182 complement(2170767..2171276) 1 NC_011206.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dar:Daro_3090 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C 2171276 6878182 Lferr_2191 Acidithiobacillus ferrooxidans ATCC 53993 molybdenum cofactor biosynthesis protein C YP_002220601.1 2170767 R 380394 CDS YP_002220602.1 198284281 6878183 2171534..2172577 1 NC_011206.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2172577 6878183 Lferr_2192 Acidithiobacillus ferrooxidans ATCC 53993 rod shape-determining protein MreB YP_002220602.1 2171534 D 380394 CDS YP_002220603.1 198284282 6878184 2172601..2173440 1 NC_011206.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: swd:Swoo_4401 rod shape-determining protein MreC; rod shape-determining protein MreC 2173440 6878184 Lferr_2193 Acidithiobacillus ferrooxidans ATCC 53993 rod shape-determining protein MreC YP_002220603.1 2172601 D 380394 CDS YP_002220604.1 198284283 6878185 2173437..2173913 1 NC_011206.1 TIGRFAM: rod shape-determining protein MreD; KEGG: sde:Sde_3190 rod shape-determining protein MreD; rod shape-determining protein MreD 2173913 6878185 Lferr_2194 Acidithiobacillus ferrooxidans ATCC 53993 rod shape-determining protein MreD YP_002220604.1 2173437 D 380394 CDS YP_002220605.1 198284284 6878186 2173910..2175718 1 NC_011206.1 KEGG: mca:MCA0103 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 2175718 6878186 Lferr_2195 Acidithiobacillus ferrooxidans ATCC 53993 penicillin-binding protein 2 YP_002220605.1 2173910 D 380394 CDS YP_002220606.1 198284285 6878187 2175715..2176809 1 NC_011206.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: aeh:Mlg_0173 rod shape-determining protein RodA; rod shape-determining protein RodA 2176809 6878187 Lferr_2196 Acidithiobacillus ferrooxidans ATCC 53993 rod shape-determining protein RodA YP_002220606.1 2175715 D 380394 CDS YP_002220607.1 198284286 6878188 2176952..2178118 1 NC_011206.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: acr:Acry_0248 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2178118 6878188 Lferr_2197 Acidithiobacillus ferrooxidans ATCC 53993 serine-type D-Ala-D-Ala carboxypeptidase YP_002220607.1 2176952 D 380394 CDS YP_002220608.1 198284287 6878189 2178411..2178677 1 NC_011206.1 PFAM: protein of unknown function DUF493; KEGG: sbn:Sbal195_3458 protein of unknown function DUF493; hypothetical protein 2178677 6878189 Lferr_2198 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220608.1 2178411 D 380394 CDS YP_002220609.1 198284288 6878190 2178674..2179312 1 NC_011206.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: hch:HCH_05837 lipoate-protein ligase B; lipoate-protein ligase B 2179312 6878190 Lferr_2199 Acidithiobacillus ferrooxidans ATCC 53993 lipoate-protein ligase B YP_002220609.1 2178674 D 380394 CDS YP_002220610.1 198284289 6878191 2179315..2180268 1 NC_011206.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2180268 6878191 Lferr_2200 Acidithiobacillus ferrooxidans ATCC 53993 lipoyl synthase YP_002220610.1 2179315 D 380394 CDS YP_002220611.1 198284290 6878192 2180289..2181083 1 NC_011206.1 PFAM: protein of unknown function DUF218; KEGG: mms:mma_3577 hypothetical protein; hypothetical protein 2181083 6878192 Lferr_2201 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220611.1 2180289 D 380394 CDS YP_002220612.1 198284291 6878193 complement(2181114..2182199) 1 NC_011206.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pap:PSPA7_2300 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2182199 6878193 Lferr_2202 Acidithiobacillus ferrooxidans ATCC 53993 ErfK/YbiS/YcfS/YnhG family protein YP_002220612.1 2181114 R 380394 CDS YP_002220613.1 198284292 6878194 2182313..2182744 1 NC_011206.1 hypothetical protein 2182744 6878194 Lferr_2203 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220613.1 2182313 D 380394 CDS YP_002220614.1 198284293 6878195 2182827..2184299 1 NC_011206.1 KEGG: nmc:NMC1673 hypothetical protein; hypothetical protein 2184299 6878195 Lferr_2204 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220614.1 2182827 D 380394 CDS YP_002220615.1 198284294 6878196 2184309..2185478 1 NC_011206.1 KEGG: nmc:NMC1672 hypothetical protein; response regulator receiver protein 2185478 6878196 Lferr_2205 Acidithiobacillus ferrooxidans ATCC 53993 response regulator receiver protein YP_002220615.1 2184309 D 380394 CDS YP_002220616.1 198284295 6878197 2185538..2186104 1 NC_011206.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; KEGG: nmn:NMCC_1665 hypothetical protein; small GTP-binding protein 2186104 6878197 Lferr_2206 Acidithiobacillus ferrooxidans ATCC 53993 small GTP-binding protein YP_002220616.1 2185538 D 380394 CDS YP_002220617.1 198284296 6878198 2186101..2186739 1 NC_011206.1 KEGG: noc:Noc_0134 hypothetical protein; hypothetical protein 2186739 6878198 Lferr_2207 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220617.1 2186101 D 380394 CDS YP_002220618.1 198284297 6878199 2186785..2187147 1 NC_011206.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 roadblock/LC7; Roadblock/LC7 family protein 2187147 6878199 Lferr_2208 Acidithiobacillus ferrooxidans ATCC 53993 Roadblock/LC7 family protein YP_002220618.1 2186785 D 380394 CDS YP_002220619.1 198284298 6878200 2187237..2188121 1 NC_011206.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2188121 glyQ 6878200 glyQ Acidithiobacillus ferrooxidans ATCC 53993 glycyl-tRNA synthetase subunit alpha YP_002220619.1 2187237 D 380394 CDS YP_002220620.1 198284299 6878201 2188108..2190192 1 NC_011206.1 KEGG: noc:Noc_0373 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 2190192 6878201 Lferr_2210 Acidithiobacillus ferrooxidans ATCC 53993 glycyl-tRNA synthetase subunit beta YP_002220620.1 2188108 D 380394 CDS YP_002220621.1 198284300 6878202 2190192..2190731 1 NC_011206.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dar:Daro_3536 D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein 2190731 6878202 Lferr_2211 Acidithiobacillus ferrooxidans ATCC 53993 histidinol-phosphate phosphatase family protein YP_002220621.1 2190192 D 380394 CDS YP_002220622.1 198284301 6878203 2190728..2191456 1 NC_011206.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: noc:Noc_0375 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2191456 6878203 Lferr_2212 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid/glycerol acyltransferase YP_002220622.1 2190728 D 380394 CDS YP_002220623.1 198284302 6878204 complement(2191404..2192312) 1 NC_011206.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO_2270 ribosomal protein S6 modification protein; RimK family alpha-L-glutamate ligase 2192312 6878204 Lferr_2213 Acidithiobacillus ferrooxidans ATCC 53993 RimK family alpha-L-glutamate ligase YP_002220623.1 2191404 R 380394 CDS YP_002220624.1 198284303 6878205 complement(2192315..2192635) 1 NC_011206.1 hypothetical protein 2192635 6878205 Lferr_2214 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220624.1 2192315 R 380394 CDS YP_002220625.1 198284304 6878206 2192813..2194165 1 NC_011206.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sto:ST1874 hypothetical protein; hypothetical protein 2194165 6878206 Lferr_2215 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220625.1 2192813 D 380394 CDS YP_002220626.1 198284305 6878207 2194349..2194645 1 NC_011206.1 hypothetical protein 2194645 6878207 Lferr_2216 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220626.1 2194349 D 380394 CDS YP_002220627.1 198284306 6878208 2194883..2195584 1 NC_011206.1 PFAM: protein of unknown function DUF208; KEGG: bbr:BB3234 hypothetical protein; hypothetical protein 2195584 6878208 Lferr_2217 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220627.1 2194883 D 380394 CDS YP_002220628.1 198284307 6878209 complement(2195518..2196108) 1 NC_011206.1 KEGG: tbd:Tbd_1043 hypothetical protein; hypothetical protein 2196108 6878209 Lferr_2218 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220628.1 2195518 R 380394 CDS YP_002220629.1 198284308 6878210 complement(2196098..2196652) 1 NC_011206.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pfo:Pfl_0787 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase 2196652 6878210 Lferr_2219 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyl-anhydromuranmyl-L-alanine amidase YP_002220629.1 2196098 R 380394 CDS YP_002220630.1 198284309 6878211 complement(2196649..2196984) 1 NC_011206.1 KEGG: tbd:Tbd_0801 hypothetical protein; hypothetical protein 2196984 6878211 Lferr_2220 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220630.1 2196649 R 380394 CDS YP_002220631.1 198284310 6878212 complement(2197245..2197469) 1 NC_011206.1 hypothetical protein 2197469 6878212 Lferr_2221 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220631.1 2197245 R 380394 CDS YP_002220632.1 198284311 6878213 complement(2197580..2197999) 1 NC_011206.1 KEGG: tbd:Tbd_0486 hypothetical protein; hypothetical protein 2197999 6878213 Lferr_2222 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220632.1 2197580 R 380394 CDS YP_002220633.1 198284312 6878214 complement(2198057..2198671) 1 NC_011206.1 PFAM: Glutathione S-transferase domain; KEGG: pna:Pnap_2477 glutathione S-transferase, C-terminal domain; glutathione S-transferase domain 2198671 6878214 Lferr_2223 Acidithiobacillus ferrooxidans ATCC 53993 glutathione S-transferase domain YP_002220633.1 2198057 R 380394 CDS YP_002220634.1 198284313 6878215 2198900..2199274 1 NC_011206.1 PFAM: helix-turn-helix HxlR type; KEGG: ava:Ava_1063 predicted transcriptional regulator; HxlR family transcriptional regulator 2199274 6878215 Lferr_2224 Acidithiobacillus ferrooxidans ATCC 53993 HxlR family transcriptional regulator YP_002220634.1 2198900 D 380394 CDS YP_002220635.1 198284314 6878216 complement(2199359..2200900) 1 NC_011206.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: hha:Hhal_0690 2-isopropylmalate synthase; 2-isopropylmalate synthase 2200900 6878216 Lferr_2225 Acidithiobacillus ferrooxidans ATCC 53993 2-isopropylmalate synthase YP_002220635.1 2199359 R 380394 CDS YP_002220636.1 198284315 6878217 complement(2200975..2202294) 1 NC_011206.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tbd:Tbd_2227 possible transcriptional regulator, fis family; sigma-54 specific transcriptional regulator 2202294 6878217 Lferr_2226 Acidithiobacillus ferrooxidans ATCC 53993 sigma-54 specific transcriptional regulator YP_002220636.1 2200975 R 380394 CDS YP_002220637.1 198284316 6878218 2202693..2203079 1 NC_011206.1 KEGG: mag:amb1815 hypothetical protein; hypothetical protein 2203079 6878218 Lferr_2227 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220637.1 2202693 D 380394 CDS YP_002220638.1 198284317 6878219 2203123..2203353 1 NC_011206.1 PFAM: SirA family protein; KEGG: mag:amb1816 predicted redox protein, regulator of disulfide bond formation; SirA family protein 2203353 6878219 Lferr_2228 Acidithiobacillus ferrooxidans ATCC 53993 SirA family protein YP_002220638.1 2203123 D 380394 CDS YP_002220639.1 198284318 6878220 2203396..2204535 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb1817 uncharacterized NAD(FAD)-dependent dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2204535 6878220 Lferr_2229 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002220639.1 2203396 D 380394 CDS YP_002220640.1 198284319 6878221 2204548..2205174 1 NC_011206.1 KEGG: mag:amb1818 hypothetical protein; hypothetical protein 2205174 6878221 Lferr_2230 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220640.1 2204548 D 380394 CDS YP_002220641.1 198284320 6878222 2205654..2206265 1 NC_011206.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A2423 hypothetical protein; type 12 methyltransferase 2206265 6878222 Lferr_2231 Acidithiobacillus ferrooxidans ATCC 53993 type 12 methyltransferase YP_002220641.1 2205654 D 380394 CDS YP_002220642.1 198284321 6878223 2206413..2206568 1 NC_011206.1 hypothetical protein 2206568 6878223 Lferr_2232 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220642.1 2206413 D 380394 CDS YP_002220643.1 198284322 6878224 2206634..2207557 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3123 putative thiamine transport ATP-binding protein; ABC transporter-like protein 2207557 6878224 Lferr_2233 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220643.1 2206634 D 380394 CDS YP_002220644.1 198284323 6878225 2207554..2208990 1 NC_011206.1 KEGG: pmf:P9303_06661 protein secretion component, Tat family protein; hypothetical protein 2208990 6878225 Lferr_2234 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220644.1 2207554 D 380394 CDS YP_002220645.1 198284324 6878226 2209535..2209642 1 NC_011206.1 hypothetical protein 2209642 6878226 Lferr_2235 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220645.1 2209535 D 380394 CDS YP_002220646.1 198284325 6878228 complement(2209829..2210281) 1 NC_011206.1 PFAM: regulatory protein MerR; KEGG: reh:H16_A1346 transcriptional regulator, MerR-family; merR family transcriptional regulator 2210281 6878228 Lferr_2236 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002220646.1 2209829 R 380394 CDS YP_002220647.1 198284326 6878229 complement(2210256..2210555) 1 NC_011206.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: bpd:BURPS668_1718 integration host factor alpha subunit; integration host factor subunit alpha 2210555 6878229 Lferr_2237 Acidithiobacillus ferrooxidans ATCC 53993 integration host factor subunit alpha YP_002220647.1 2210256 R 380394 CDS YP_002220648.1 198284327 6878230 complement(2210565..2212964) 1 NC_011206.1 KEGG: mca:MCA0698 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 2212964 6878230 Lferr_2238 Acidithiobacillus ferrooxidans ATCC 53993 phenylalanyl-tRNA synthetase subunit beta YP_002220648.1 2210565 R 380394 CDS YP_002220649.1 198284328 6878231 complement(2212974..2213996) 1 NC_011206.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2213996 pheS 6878231 pheS Acidithiobacillus ferrooxidans ATCC 53993 phenylalanyl-tRNA synthetase subunit alpha YP_002220649.1 2212974 R 380394 CDS YP_002220650.1 198284329 6878232 complement(2214017..2214376) 1 NC_011206.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2214376 rplT 6878232 rplT Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L20 YP_002220650.1 2214017 R 380394 CDS YP_002220651.1 198284330 6878233 complement(2214395..2214592) 1 NC_011206.1 PFAM: ribosomal protein L35; KEGG: noc:Noc_1142 50S ribosomal protein L35; 50S ribosomal protein L35 2214592 rpmI 6878233 rpmI Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L35 YP_002220651.1 2214395 R 380394 CDS YP_002220652.1 198284331 6878234 complement(2214602..2215102) 1 NC_011206.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bps:BPSL1944 translation initiation factor IF-3; translation initiation factor IF-3 2215102 6878234 Lferr_2242 Acidithiobacillus ferrooxidans ATCC 53993 translation initiation factor IF-3 YP_002220652.1 2214602 R 380394 CDS YP_002220653.1 198284332 6878235 complement(2215137..2217071) 1 NC_011206.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2217071 thrS 6878235 thrS Acidithiobacillus ferrooxidans ATCC 53993 threonyl-tRNA synthetase YP_002220653.1 2215137 R 380394 CDS YP_002220654.1 198284333 6878237 complement(2217355..2218800) 1 NC_011206.1 KEGG: tbd:Tbd_1155 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2218800 6878237 Lferr_2244 Acidithiobacillus ferrooxidans ATCC 53993 proton-translocating NADH-quinone oxidoreductase subunit N YP_002220654.1 2217355 R 380394 CDS YP_002220655.1 198284334 6878238 complement(2218813..2220297) 1 NC_011206.1 KEGG: mfa:Mfla_2049 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2220297 6878238 Lferr_2245 Acidithiobacillus ferrooxidans ATCC 53993 proton-translocating NADH-quinone oxidoreductase subunit M YP_002220655.1 2218813 R 380394 CDS YP_002220656.1 198284335 6878239 complement(2220301..2222283) 1 NC_011206.1 KEGG: noc:Noc_2554 NADH-plastoquinone oxidoreductase, chain 5; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 2222283 6878239 Lferr_2246 Acidithiobacillus ferrooxidans ATCC 53993 proton-translocating NADH-quinone oxidoreductase subunit L YP_002220656.1 2220301 R 380394 CDS YP_002220657.1 198284336 6878240 complement(2222285..2222605) 1 NC_011206.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rso:RSc2052 NADH dehydrogenase subunit K; NADH-ubiquinone oxidoreductase subunit 4L 2222605 6878240 Lferr_2247 Acidithiobacillus ferrooxidans ATCC 53993 NADH-ubiquinone oxidoreductase subunit 4L YP_002220657.1 2222285 R 380394 CDS YP_002220658.1 198284337 6878241 complement(2222602..2223198) 1 NC_011206.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nmu:Nmul_A1100 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 2223198 6878241 Lferr_2248 Acidithiobacillus ferrooxidans ATCC 53993 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_002220658.1 2222602 R 380394 CDS YP_002220659.1 198284338 6878242 complement(2223214..2223705) 1 NC_011206.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2223705 6878242 Lferr_2249 Acidithiobacillus ferrooxidans ATCC 53993 NADH dehydrogenase subunit I YP_002220659.1 2223214 R 380394 CDS YP_002220660.1 198284339 6878243 complement(2223716..2224741) 1 NC_011206.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: tbd:Tbd_1149 NADH dehydrogenase I chain H; NADH dehydrogenase (quinone) 2224741 6878243 Lferr_2250 Acidithiobacillus ferrooxidans ATCC 53993 NADH dehydrogenase (quinone) YP_002220660.1 2223716 R 380394 CDS YP_002220661.1 198284340 6878244 complement(2224753..2227101) 1 NC_011206.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: hha:Hhal_1759 NADH-quinone oxidoreductase, chain G; NADH-quinone oxidoreductase subunit G 2227101 6878244 Lferr_2251 Acidithiobacillus ferrooxidans ATCC 53993 NADH-quinone oxidoreductase subunit G YP_002220661.1 2224753 R 380394 CDS YP_002220662.1 198284341 6878245 complement(2227101..2228384) 1 NC_011206.1 KEGG: nmu:Nmul_A1096 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 2228384 6878245 Lferr_2252 Acidithiobacillus ferrooxidans ATCC 53993 NADH-quinone oxidoreductase subunit F YP_002220662.1 2227101 R 380394 CDS YP_002220663.1 198284342 6878246 complement(2228374..2228865) 1 NC_011206.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: eba:ebA4838 NADH dehydrogenase subunit E; NADH-quinone oxidoreductase subunit E 2228865 6878246 Lferr_2253 Acidithiobacillus ferrooxidans ATCC 53993 NADH-quinone oxidoreductase subunit E YP_002220663.1 2228374 R 380394 CDS YP_002220664.1 198284343 6878247 complement(2228869..2230122) 1 NC_011206.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2230122 6878247 Lferr_2254 Acidithiobacillus ferrooxidans ATCC 53993 NADH dehydrogenase subunit D YP_002220664.1 2228869 R 380394 CDS YP_002220665.1 198284344 6878248 complement(2230106..2230714) 1 NC_011206.1 KEGG: azo:azo1398 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 2230714 6878248 Lferr_2255 Acidithiobacillus ferrooxidans ATCC 53993 NADH (or F420H2) dehydrogenase subunit C YP_002220665.1 2230106 R 380394 CDS YP_002220666.1 198284345 6878249 complement(2230718..2231194) 1 NC_011206.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2231194 6878249 Lferr_2256 Acidithiobacillus ferrooxidans ATCC 53993 NADH dehydrogenase subunit B YP_002220666.1 2230718 R 380394 CDS YP_002220667.1 198284346 6878250 complement(2231185..2231541) 1 NC_011206.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: tbd:Tbd_1142 NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 2231541 6878250 Lferr_2257 Acidithiobacillus ferrooxidans ATCC 53993 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002220667.1 2231185 R 380394 CDS YP_002220668.1 198284347 6878252 complement(2231797..2232198) 1 NC_011206.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bam:Bamb_2288 preprotein translocase subunit SecG; preprotein translocase subunit SecG 2232198 6878252 Lferr_2258 Acidithiobacillus ferrooxidans ATCC 53993 preprotein translocase subunit SecG YP_002220668.1 2231797 R 380394 CDS YP_002220669.1 198284348 6878253 complement(2232203..2232943) 1 NC_011206.1 PFAM: triosephosphate isomerase; KEGG: noc:Noc_2566 triosephosphate isomerase; Triose-phosphate isomerase 2232943 6878253 Lferr_2259 Acidithiobacillus ferrooxidans ATCC 53993 Triose-phosphate isomerase YP_002220669.1 2232203 R 380394 CDS YP_002220670.1 198284349 6878254 complement(2233083..2234447) 1 NC_011206.1 KEGG: bmu:Bmul_2021 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucosamine mutase 2234447 6878254 Lferr_2260 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglucosamine mutase YP_002220670.1 2233083 R 380394 CDS YP_002220671.1 198284350 6878255 complement(2234486..2235262) 1 NC_011206.1 KEGG: hha:Hhal_1769 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 2235262 6878255 Lferr_2261 Acidithiobacillus ferrooxidans ATCC 53993 dihydropteroate synthase YP_002220671.1 2234486 R 380394 CDS YP_002220672.1 198284351 6878256 complement(2235316..2237241) 1 NC_011206.1 KEGG: nmu:Nmul_A0483 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2237241 6878256 Lferr_2262 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent metalloprotease FtsH YP_002220672.1 2235316 R 380394 CDS YP_002220673.1 198284352 6878257 complement(2237339..2238784) 1 NC_011206.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: tbd:Tbd_0512 putative modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 2238784 6878257 Lferr_2263 Acidithiobacillus ferrooxidans ATCC 53993 peptidase U62 modulator of DNA gyrase YP_002220673.1 2237339 R 380394 CDS YP_002220674.1 198284353 6878258 2239109..2241955 1 NC_011206.1 KEGG: nha:Nham_3663 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 2241955 6878258 Lferr_2264 Acidithiobacillus ferrooxidans ATCC 53993 ribonucleoside-diphosphate reductase subunit alpha YP_002220674.1 2239109 D 380394 CDS YP_002220675.1 198284354 6878259 2241986..2243110 1 NC_011206.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 2243110 6878259 Lferr_2265 Acidithiobacillus ferrooxidans ATCC 53993 ribonucleotide-diphosphate reductase subunit beta YP_002220675.1 2241986 D 380394 CDS YP_002220676.1 198284355 6878261 2243868..2244224 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: chy:CHY_1098 transcriptional regulator, ArsR family; arsR family transcriptional regulator 2244224 6878261 Lferr_2267 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002220676.1 2243868 D 380394 CDS YP_002220677.1 198284356 6878262 2244221..2245498 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_3238 major facilitator superfamily MFS_1; major facilitator superfamily protein 2245498 6878262 Lferr_2268 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002220677.1 2244221 D 380394 CDS YP_002220678.1 198284357 6878263 2245495..2245836 1 NC_011206.1 PFAM: DsrE family protein; KEGG: mgm:Mmc1_1103 DsrE family protein; DsrE family protein 2245836 6878263 Lferr_2269 Acidithiobacillus ferrooxidans ATCC 53993 DsrE family protein YP_002220678.1 2245495 D 380394 CDS YP_002220679.1 198284358 6878264 2245890..2246642 1 NC_011206.1 PFAM: beta-lactamase domain protein; KEGG: xau:Xaut_2897 beta-lactamase domain protein; beta-lactamase domain-containing protein 2246642 6878264 Lferr_2270 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002220679.1 2245890 D 380394 CDS YP_002220680.1 198284359 6878265 complement(2247022..2247423) 1 NC_011206.1 hypothetical protein 2247423 6878265 Lferr_2271 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220680.1 2247022 R 380394 CDS YP_002220681.1 198284360 6878266 complement(2247658..2247759) 1 NC_011206.1 hypothetical protein 2247759 6878266 Lferr_2272 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220681.1 2247658 R 380394 CDS YP_002220682.1 198284361 6878267 complement(2248383..2248568) 1 NC_011206.1 hypothetical protein 2248568 6878267 Lferr_2273 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220682.1 2248383 R 380394 CDS YP_002220683.1 198284362 6878268 complement(2248602..2249123) 1 NC_011206.1 hypothetical protein 2249123 6878268 Lferr_2274 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220683.1 2248602 R 380394 CDS YP_002220684.1 198284363 6878269 2249339..2249773 1 NC_011206.1 KEGG: pna:Pnap_1362 hypothetical protein; hypothetical protein 2249773 6878269 Lferr_2275 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220684.1 2249339 D 380394 CDS YP_002220685.1 198284364 6878270 2250205..2250579 1 NC_011206.1 PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_B2706 copper resistance protein CopC; copper resistance protein CopC 2250579 6878270 Lferr_2276 Acidithiobacillus ferrooxidans ATCC 53993 copper resistance protein CopC YP_002220685.1 2250205 D 380394 CDS YP_002220686.1 198284365 6878272 complement(2252301..2252588) 1 NC_011206.1 hypothetical protein 2252588 6878272 Lferr_2278 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220686.1 2252301 R 380394 CDS YP_002220687.1 198284366 6878273 complement(2252705..2252875) 1 NC_011206.1 hypothetical protein 2252875 6878273 Lferr_2279 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220687.1 2252705 R 380394 CDS YP_002220688.1 198284367 6878274 2252997..2254133 1 NC_011206.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: aeh:Mlg_2775 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2254133 6878274 Lferr_2280 Acidithiobacillus ferrooxidans ATCC 53993 DNA-directed DNA polymerase YP_002220688.1 2252997 D 380394 CDS YP_002220689.1 198284368 6878275 2254179..2254520 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: neu:NE0498 PIN (PilT N terminus) domain; PilT protein domain-containing protein 2254520 6878275 Lferr_2281 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002220689.1 2254179 D 380394 CDS YP_002220690.1 198284369 6878276 complement(2254590..2255327) 1 NC_011206.1 PFAM: protein of unknown function DUF72; KEGG: sus:Acid_2024 protein of unknown function DUF72; hypothetical protein 2255327 6878276 Lferr_2282 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220690.1 2254590 R 380394 CDS YP_002220691.1 198284370 6878277 2255703..2255906 1 NC_011206.1 KEGG: syf:Synpcc7942_B2638 hypothetical protein; hypothetical protein 2255906 6878277 Lferr_2283 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220691.1 2255703 D 380394 CDS YP_002220692.1 198284371 6878278 2255875..2256177 1 NC_011206.1 KEGG: bpd:BURPS668_3899 hypothetical protein; hypothetical protein 2256177 6878278 Lferr_2284 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220692.1 2255875 D 380394 CDS YP_002220693.1 198284372 6878279 2256230..2257645 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7711 amino acid permease-associated region; amino acid permease-associated protein 2257645 6878279 Lferr_2285 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002220693.1 2256230 D 380394 CDS YP_002220694.1 198284373 6878280 complement(2257757..2258323) 1 NC_011206.1 TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: reu:Reut_A0688 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 2258323 6878280 Lferr_2286 Acidithiobacillus ferrooxidans ATCC 53993 deoxycytidine triphosphate deaminase YP_002220694.1 2257757 R 380394 CDS YP_002220695.1 198284374 6878281 complement(2258353..2259429) 1 NC_011206.1 KEGG: tbd:Tbd_2108 ATP-binding protein involved in chromosome partitioning; chromosome partitioning ATPase 2259429 6878281 Lferr_2287 Acidithiobacillus ferrooxidans ATCC 53993 chromosome partitioning ATPase YP_002220695.1 2258353 R 380394 CDS YP_002220696.1 198284375 6878282 complement(2259444..2259758) 1 NC_011206.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: csa:Csal_2488 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2259758 6878282 Lferr_2288 Acidithiobacillus ferrooxidans ATCC 53993 antibiotic biosynthesis monooxygenase YP_002220696.1 2259444 R 380394 CDS YP_002220697.1 198284376 6878283 complement(2259788..2260618) 1 NC_011206.1 PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; KEGG: tbd:Tbd_1125 dihydrodipicolinate reductase; dihydrodipicolinate reductase 2260618 6878283 Lferr_2289 Acidithiobacillus ferrooxidans ATCC 53993 dihydrodipicolinate reductase YP_002220697.1 2259788 R 380394 CDS YP_002220698.1 198284377 6878284 complement(2260618..2261745) 1 NC_011206.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2261745 6878284 Lferr_2290 Acidithiobacillus ferrooxidans ATCC 53993 chaperone protein DnaJ YP_002220698.1 2260618 R 380394 CDS YP_002220699.1 198284378 6878285 complement(2261812..2263716) 1 NC_011206.1 KEGG: aeh:Mlg_1900 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 2263716 6878285 Lferr_2291 Acidithiobacillus ferrooxidans ATCC 53993 chaperone protein DnaK YP_002220699.1 2261812 R 380394 CDS YP_002220700.1 198284379 6878286 complement(2263762..2264277) 1 NC_011206.1 PFAM: GrpE protein; KEGG: ppu:PP_4728 heat shock protein GrpE; GrpE protein HSP-70 cofactor 2264277 6878286 Lferr_2292 Acidithiobacillus ferrooxidans ATCC 53993 GrpE protein HSP-70 cofactor YP_002220700.1 2263762 R 380394 CDS YP_002220701.1 198284380 6878287 complement(2264350..2265372) 1 NC_011206.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: hha:Hhal_1478 heat-inducible transcription repressor HrcA; heat-inducible transcription repressor HrcA 2265372 6878287 Lferr_2293 Acidithiobacillus ferrooxidans ATCC 53993 heat-inducible transcription repressor HrcA YP_002220701.1 2264350 R 380394 CDS YP_002220702.1 198284381 6878288 complement(2265607..2265762) 1 NC_011206.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2265762 rpmG 6878288 rpmG Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L33 YP_002220702.1 2265607 R 380394 CDS YP_002220703.1 198284382 6878289 complement(2265773..2266009) 1 NC_011206.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2266009 rpmB 6878289 rpmB Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L28 YP_002220703.1 2265773 R 380394 CDS YP_002220704.1 198284383 6878290 2266120..2268156 1 NC_011206.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: mfa:Mfla_1065 methionyl-tRNA synthetase; methionyl-tRNA synthetase 2268156 6878290 Lferr_2296 Acidithiobacillus ferrooxidans ATCC 53993 methionyl-tRNA synthetase YP_002220704.1 2266120 D 380394 CDS YP_002220705.1 198284384 6878291 complement(2268149..2269267) 1 NC_011206.1 PFAM: DAHP synthetase I/KDSA; KEGG: nmu:Nmul_A0091 3-deoxy-7-phosphoheptulonate synthase; 3-deoxy-7-phosphoheptulonate synthase 2269267 6878291 Lferr_2297 Acidithiobacillus ferrooxidans ATCC 53993 3-deoxy-7-phosphoheptulonate synthase YP_002220705.1 2268149 R 380394 CDS YP_002220706.1 198284385 6878292 complement(2269346..2270719) 1 NC_011206.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: tel:tll1534 fumarate hydratase; class II fumarate hydratase 2270719 6878292 Lferr_2298 Acidithiobacillus ferrooxidans ATCC 53993 class II fumarate hydratase YP_002220706.1 2269346 R 380394 CDS YP_002220707.1 198284386 6878293 complement(2270721..2272517) 1 NC_011206.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: sru:SRU_1312 oligoendopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F 2272517 6878293 Lferr_2299 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M3A and M3B thimet/oligopeptidase F YP_002220707.1 2270721 R 380394 CDS YP_002220708.1 198284387 6878294 complement(2272561..2273007) 1 NC_011206.1 PFAM: Domain of unknown function DUF1841; KEGG: net:Neut_1650 hypothetical protein; hypothetical protein 2273007 6878294 Lferr_2300 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220708.1 2272561 R 380394 CDS YP_002220709.1 198284388 6878295 2273171..2274874 1 NC_011206.1 KEGG: bcl:ABC3831 phage infection protein; hypothetical protein 2274874 6878295 Lferr_2301 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220709.1 2273171 D 380394 CDS YP_002220710.1 198284389 6878296 complement(2274940..2275509) 1 NC_011206.1 KEGG: har:HEAR2720 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase); 3-deoxy-D-manno-octulosonic-acid transferase 2275509 6878296 Lferr_2302 Acidithiobacillus ferrooxidans ATCC 53993 3-deoxy-D-manno-octulosonic-acid transferase YP_002220710.1 2274940 R 380394 CDS YP_002220711.1 198284390 6878297 2275667..2277136 1 NC_011206.1 KEGG: mca:MCA1476 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; glycogen/starch synthase 2277136 6878297 Lferr_2303 Acidithiobacillus ferrooxidans ATCC 53993 glycogen/starch synthase YP_002220711.1 2275667 D 380394 CDS YP_002220712.1 198284391 6878298 2277177..2278565 1 NC_011206.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mta:Moth_1187 RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 2278565 6878298 Lferr_2304 Acidithiobacillus ferrooxidans ATCC 53993 beta-lactamase domain-containing protein YP_002220712.1 2277177 D 380394 CDS YP_002220713.1 198284392 6878299 2278649..2279065 1 NC_011206.1 hypothetical protein 2279065 6878299 Lferr_2305 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220713.1 2278649 D 380394 CDS YP_002220714.1 198284393 6878300 2279163..2279825 1 NC_011206.1 KEGG: mca:MCA2899 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III 2279825 6878300 Lferr_2306 Acidithiobacillus ferrooxidans ATCC 53993 endonuclease III YP_002220714.1 2279163 D 380394 CDS YP_002220715.1 198284394 6878301 complement(2279805..2281766) 1 NC_011206.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain protein; hypothetical protein 2281766 6878301 Lferr_2307 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220715.1 2279805 R 380394 CDS YP_002220716.1 198284395 6878302 2282264..2284498 1 NC_011206.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: ecx:EcHS_A3814 putative haemagglutinin; hemagluttinin domain-containing protein 2284498 6878302 Lferr_2308 Acidithiobacillus ferrooxidans ATCC 53993 hemagluttinin domain-containing protein YP_002220716.1 2282264 D 380394 CDS YP_002220717.1 198284396 6878303 2284606..2285160 1 NC_011206.1 PFAM: OmpA/MotB domain protein; KEGG: pap:PSPA7_4338 probable outer membrane protein; ompA/MotB domain-containing protein 2285160 6878303 Lferr_2309 Acidithiobacillus ferrooxidans ATCC 53993 ompA/MotB domain-containing protein YP_002220717.1 2284606 D 380394 CDS YP_002220718.1 198284397 6878304 complement(2285225..2286190) 1 NC_011206.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: zmo:ZMO0137 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2286190 6878304 Lferr_2310 Acidithiobacillus ferrooxidans ATCC 53993 Sel1 domain-containing protein repeat-containing protein YP_002220718.1 2285225 R 380394 CDS YP_002220719.1 198284398 6878305 2286540..2287127 1 NC_011206.1 KEGG: bcm:Bcenmc03_1492 collagen triple helix repeat; hypothetical protein 2287127 6878305 Lferr_2311 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220719.1 2286540 D 380394 CDS YP_002220720.1 198284399 6878306 2287227..2287694 1 NC_011206.1 KEGG: bmu:Bmul_2536 hypothetical protein; hypothetical protein 2287694 6878306 Lferr_2312 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220720.1 2287227 D 380394 CDS YP_002220721.1 198284400 6878307 complement(2287698..2288492) 1 NC_011206.1 KEGG: aeh:Mlg_0350 TonB family protein; hypothetical protein 2288492 6878307 Lferr_2313 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220721.1 2287698 R 380394 CDS YP_002220722.1 198284401 6878308 complement(2288485..2290446) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: rso:RSc0166 probable outer membrane channel lipoprotein; outer membrane efflux protein 2290446 6878308 Lferr_2314 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002220722.1 2288485 R 380394 CDS YP_002220723.1 198284402 6878309 complement(2290443..2291840) 1 NC_011206.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: plu:plu0635 hypothetical protein; HlyD family type I secretion membrane fusion protein 2291840 6878309 Lferr_2315 Acidithiobacillus ferrooxidans ATCC 53993 HlyD family type I secretion membrane fusion protein YP_002220723.1 2290443 R 380394 CDS YP_002220724.1 198284403 6878310 complement(2291842..2294016) 1 NC_011206.1 KEGG: hch:HCH_06117 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 2294016 6878310 Lferr_2316 Acidithiobacillus ferrooxidans ATCC 53993 type I secretion system ATPase YP_002220724.1 2291842 R 380394 CDS YP_002220725.1 198284404 6878311 complement(2294013..2294789) 1 NC_011206.1 KEGG: bpt:Bpet3370 putative lipoprotein; lipoprotein 2294789 6878311 Lferr_2317 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein YP_002220725.1 2294013 R 380394 CDS YP_002220726.1 198284405 6878312 complement(2294896..2296284) 1 NC_011206.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bmn:BMA10247_1040 sigma-54 interaction domain/fis family transcriptional regulator domain protein; sigma-54 specific transcriptional regulator 2296284 6878312 Lferr_2318 Acidithiobacillus ferrooxidans ATCC 53993 sigma-54 specific transcriptional regulator YP_002220726.1 2294896 R 380394 CDS YP_002220727.1 198284406 6878313 complement(2296284..2298074) 1 NC_011206.1 KEGG: bur:Bcep18194_A4668 membrane protein; hypothetical protein 2298074 6878313 Lferr_2319 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220727.1 2296284 R 380394 CDS YP_002220728.1 198284407 6878314 complement(2298040..2298651) 1 NC_011206.1 KEGG: bbr:BB1832 hypothetical protein; hypothetical protein 2298651 6878314 Lferr_2320 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220728.1 2298040 R 380394 CDS YP_002220729.1 198284408 6878315 complement(2298648..2299487) 1 NC_011206.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bam:Bamb_1408 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2299487 6878315 Lferr_2321 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220729.1 2298648 R 380394 CDS YP_002220730.1 198284409 6878316 complement(2299490..2300428) 1 NC_011206.1 PFAM: type II secretion system protein; KEGG: rso:RS02590 putative tight adherence TadC related transmembrane protein; type II secretion system protein 2300428 6878316 Lferr_2322 Acidithiobacillus ferrooxidans ATCC 53993 type II secretion system protein YP_002220730.1 2299490 R 380394 CDS YP_002220731.1 198284410 6878317 complement(2300436..2301377) 1 NC_011206.1 PFAM: type II secretion system protein; KEGG: reh:H16_B0188 flp pilus assembly protein TadB; type II secretion system protein 2301377 6878317 Lferr_2323 Acidithiobacillus ferrooxidans ATCC 53993 type II secretion system protein YP_002220731.1 2300436 R 380394 CDS YP_002220732.1 198284411 6878318 complement(2301374..2302708) 1 NC_011206.1 PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A2796 putative type II/IV secretion ATPase protein, TadA; type II secretion system protein E 2302708 6878318 Lferr_2324 Acidithiobacillus ferrooxidans ATCC 53993 type II secretion system protein E YP_002220732.1 2301374 R 380394 CDS YP_002220733.1 198284412 6878319 complement(2302705..2303934) 1 NC_011206.1 KEGG: rme:Rmet_3655 response regulator receiver domain protein (CheY-like); response regulator receiver domain-containing protein (CheY-like) 2303934 6878319 Lferr_2325 Acidithiobacillus ferrooxidans ATCC 53993 response regulator receiver domain-containing protein (CheY-like) YP_002220733.1 2302705 R 380394 CDS YP_002220734.1 198284413 6878320 complement(2303931..2305367) 1 NC_011206.1 PFAM: type II and III secretion system protein; KEGG: bxe:Bxe_A2798 putative outer membrane channel signal peptide protein, CpaC like; type II and III secretion system protein 2305367 6878320 Lferr_2326 Acidithiobacillus ferrooxidans ATCC 53993 type II and III secretion system protein YP_002220734.1 2303931 R 380394 CDS YP_002220735.1 198284414 6878321 complement(2305381..2306352) 1 NC_011206.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: reu:Reut_B5408 Flp pilus assembly CpaB; Flp pilus assembly protein CpaB 2306352 6878321 Lferr_2327 Acidithiobacillus ferrooxidans ATCC 53993 Flp pilus assembly protein CpaB YP_002220735.1 2305381 R 380394 CDS YP_002220736.1 198284415 6878322 complement(2306461..2306958) 1 NC_011206.1 PFAM: TadE family protein; KEGG: bpd:BURPS668_1766 TadE family protein; TadE family protein 2306958 6878322 Lferr_2328 Acidithiobacillus ferrooxidans ATCC 53993 TadE family protein YP_002220736.1 2306461 R 380394 CDS YP_002220737.1 198284416 6878323 complement(2306955..2307413) 1 NC_011206.1 PFAM: peptidase A24A prepilin type IV; KEGG: mfa:Mfla_1645 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV 2307413 6878323 Lferr_2329 Acidithiobacillus ferrooxidans ATCC 53993 peptidase A24A prepilin type IV YP_002220737.1 2306955 R 380394 CDS YP_002220738.1 198284417 6878324 complement(2307785..2308099) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2308099 6878324 Lferr_2330 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220738.1 2307785 R 380394 CDS YP_002220739.1 198284418 6878325 complement(2308221..2309540) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2309540 6878325 Lferr_2331 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220739.1 2308221 R 380394 CDS YP_002220740.1 198284419 6878326 complement(2309603..2309812) 1 NC_011206.1 PFAM: Flp/Fap pilin component; KEGG: rme:Rmet_0653 Flp/Fap pilin component; Flp/Fap pilin component 2309812 6878326 Lferr_2332 Acidithiobacillus ferrooxidans ATCC 53993 Flp/Fap pilin component YP_002220740.1 2309603 R 380394 CDS YP_002220741.1 198284420 6878327 2310697..2311206 1 NC_011206.1 KEGG: bch:Bcen2424_6766 PE-PGRS family protein; PE-PGRS family protein 2311206 6878327 Lferr_2333 Acidithiobacillus ferrooxidans ATCC 53993 PE-PGRS family protein YP_002220741.1 2310697 D 380394 CDS YP_002220742.1 198284421 6878328 2311322..2311774 1 NC_011206.1 KEGG: bch:Bcen2424_6766 PE-PGRS family protein; PE-PGRS family protein 2311774 6878328 Lferr_2334 Acidithiobacillus ferrooxidans ATCC 53993 PE-PGRS family protein YP_002220742.1 2311322 D 380394 CDS YP_002220743.1 198284422 6878329 complement(2311881..2312201) 1 NC_011206.1 KEGG: ppf:Pput_4104 hypothetical protein; hypothetical protein 2312201 6878329 Lferr_2335 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220743.1 2311881 R 380394 CDS YP_002220744.1 198284423 6878330 complement(2312222..2312431) 1 NC_011206.1 hypothetical protein 2312431 6878330 Lferr_2336 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220744.1 2312222 R 380394 CDS YP_002220745.1 198284424 6878331 2312852..2313328 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_4705 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 2313328 6878331 Lferr_2337 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002220745.1 2312852 D 380394 CDS YP_002220746.1 198284425 6878332 complement(2313356..2315644) 1 NC_011206.1 PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bbt:BBta_4342 putative TPR repeat protein; sulfotransferase 2315644 6878332 Lferr_2338 Acidithiobacillus ferrooxidans ATCC 53993 sulfotransferase YP_002220746.1 2313356 R 380394 CDS YP_002220747.1 198284426 6878333 complement(2315745..2316146) 1 NC_011206.1 KEGG: acr:Acry_0518 hypothetical protein; hypothetical protein 2316146 6878333 Lferr_2339 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220747.1 2315745 R 380394 CDS YP_002220748.1 198284427 6878334 2316327..2318102 1 NC_011206.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2318102 6878334 Lferr_2340 Acidithiobacillus ferrooxidans ATCC 53993 anaerobic ribonucleoside triphosphate reductase YP_002220748.1 2316327 D 380394 CDS YP_002220749.1 198284428 6878335 2318122..2318328 1 NC_011206.1 KEGG: rru:Rru_A1275 hypothetical protein; hypothetical protein 2318328 6878335 Lferr_2341 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220749.1 2318122 D 380394 CDS YP_002220750.1 198284429 6878336 2318336..2319058 1 NC_011206.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rme:Rmet_5137 ribonucleoside-triphosphate reductase, anaerobic-like protein; anaerobic ribonucleoside-triphosphate reductase activating protein 2319058 6878336 Lferr_2342 Acidithiobacillus ferrooxidans ATCC 53993 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002220750.1 2318336 D 380394 CDS YP_002220751.1 198284430 6878337 complement(2319067..2320599) 1 NC_011206.1 PFAM: protein of unknown function DUF116; biotin/lipoate A/B protein ligase; KEGG: mta:Moth_0443 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 2320599 6878337 Lferr_2343 Acidithiobacillus ferrooxidans ATCC 53993 biotin/lipoate A/B protein ligase YP_002220751.1 2319067 R 380394 CDS YP_002220752.1 198284431 6878338 complement(2320613..2321491) 1 NC_011206.1 PFAM: peptidase U32; KEGG: rfr:Rfer_0135 peptidase U32; peptidase U32 2321491 6878338 Lferr_2344 Acidithiobacillus ferrooxidans ATCC 53993 peptidase U32 YP_002220752.1 2320613 R 380394 CDS YP_002220753.1 198284432 6878339 complement(2321569..2322579) 1 NC_011206.1 PFAM: peptidase U32; KEGG: azo:azo0374 conserved hypothetical peptidase; peptidase U32 2322579 6878339 Lferr_2345 Acidithiobacillus ferrooxidans ATCC 53993 peptidase U32 YP_002220753.1 2321569 R 380394 CDS YP_002220754.1 198284433 6878340 complement(2322610..2323170) 1 NC_011206.1 KEGG: tbd:Tbd_2183 hypothetical protein; lipid carrier protein-like protein 2323170 6878340 Lferr_2346 Acidithiobacillus ferrooxidans ATCC 53993 lipid carrier protein-like protein YP_002220754.1 2322610 R 380394 CDS YP_002220755.1 198284434 6878341 2323380..2324561 1 NC_011206.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mms:mma_1902 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 2324561 6878341 Lferr_2347 Acidithiobacillus ferrooxidans ATCC 53993 2-nitropropane dioxygenase YP_002220755.1 2323380 D 380394 CDS YP_002220756.1 198284435 6878342 2324558..2324905 1 NC_011206.1 hypothetical protein 2324905 6878342 Lferr_2348 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220756.1 2324558 D 380394 CDS YP_002220757.1 198284436 6878343 2325111..2325770 1 NC_011206.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0346 cytochrome c, class I; cytochrome c class I 2325770 6878343 Lferr_2349 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c class I YP_002220757.1 2325111 D 380394 CDS YP_002220758.1 198284437 6878344 2325776..2326585 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_2183 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2326585 6878344 Lferr_2350 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002220758.1 2325776 D 380394 CDS YP_002220759.1 198284438 6878345 2326616..2327236 1 NC_011206.1 KEGG: gdi:GDI3179 putative ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2327236 6878345 Lferr_2351 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_002220759.1 2326616 D 380394 CDS YP_002220760.1 198284439 6878346 2327264..2328478 1 NC_011206.1 PFAM: Cytochrome b/b6 domain; KEGG: noc:Noc_0298 cytochrome b/b6-like; cytochrome b/b6 domain-containing protein 2328478 6878346 Lferr_2352 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome b/b6 domain-containing protein YP_002220760.1 2327264 D 380394 CDS YP_002220761.1 198284440 6878347 2328501..2329202 1 NC_011206.1 PFAM: cytochrome c1; KEGG: xcc:XCC2322 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; cytochrome c1 2329202 6878347 Lferr_2353 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c1 YP_002220761.1 2328501 D 380394 CDS YP_002220762.1 198284441 6878348 2329289..2329609 1 NC_011206.1 KEGG: rpd:RPD_3616 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 2329609 6878348 Lferr_2354 Acidithiobacillus ferrooxidans ATCC 53993 twin-arginine translocation pathway signal YP_002220762.1 2329289 D 380394 CDS YP_002220763.1 198284442 6878349 2329783..2330235 1 NC_011206.1 hypothetical protein 2330235 6878349 Lferr_2355 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220763.1 2329783 D 380394 CDS YP_002220764.1 198284443 6878350 2330336..2330944 1 NC_011206.1 KEGG: mag:amb1922 hypothetical protein; hypothetical protein 2330944 6878350 Lferr_2356 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220764.1 2330336 D 380394 CDS YP_002220765.1 198284444 6878352 complement(2331099..2331758) 1 NC_011206.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pfl:PFL_0835 ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ 2331758 6878352 Lferr_2357 Acidithiobacillus ferrooxidans ATCC 53993 ribosomal RNA methyltransferase RrmJ/FtsJ YP_002220765.1 2331099 R 380394 CDS YP_002220766.1 198284445 6878353 2331848..2332132 1 NC_011206.1 PFAM: protein of unknown function UPF0044; KEGG: bcm:Bcenmc03_1266 protein of unknown function UPF0044; hypothetical protein 2332132 6878353 Lferr_2358 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220766.1 2331848 D 380394 CDS YP_002220767.1 198284446 6878354 2332222..2332605 1 NC_011206.1 PFAM: ApaG domain protein; KEGG: pap:PSPA7_0735 hypothetical protein; ApaG domain-containing protein 2332605 6878354 Lferr_2359 Acidithiobacillus ferrooxidans ATCC 53993 ApaG domain-containing protein YP_002220767.1 2332222 D 380394 CDS YP_002220768.1 198284447 6878355 2332602..2333207 1 NC_011206.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nmu:Nmul_A0349 UbiE/COQ5 methyltransferase; type 11 methyltransferase 2333207 6878355 Lferr_2360 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002220768.1 2332602 D 380394 CDS YP_002220769.1 198284448 6878356 complement(2333275..2335173) 1 NC_011206.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bpd:BURPS668_1748 GTP-binding protein TypA; GTP-binding protein TypA 2335173 6878356 Lferr_2361 Acidithiobacillus ferrooxidans ATCC 53993 GTP-binding protein TypA YP_002220769.1 2333275 R 380394 CDS YP_002220770.1 198284449 6878357 complement(2335249..2336463) 1 NC_011206.1 PFAM: phosphate-selective porin O and P; KEGG: mca:MCA1375 hypothetical protein; phosphate-selective porin O and P 2336463 6878357 Lferr_2362 Acidithiobacillus ferrooxidans ATCC 53993 phosphate-selective porin O and P YP_002220770.1 2335249 R 380394 CDS YP_002220771.1 198284450 6878359 2336783..2337676 1 NC_011206.1 PFAM: diaminopimelate epimerase; KEGG: aha:AHA_0474 diaminopimelate epimerase; diaminopimelate epimerase 2337676 6878359 Lferr_2363 Acidithiobacillus ferrooxidans ATCC 53993 diaminopimelate epimerase YP_002220771.1 2336783 D 380394 CDS YP_002220772.1 198284451 6878360 2337678..2337854 1 NC_011206.1 hypothetical protein 2337854 6878360 Lferr_2364 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220772.1 2337678 D 380394 CDS YP_002220773.1 198284452 6878361 2337855..2338538 1 NC_011206.1 PFAM: protein of unknown function DUF484; KEGG: pae:PA5279 hypothetical protein; hypothetical protein 2338538 6878361 Lferr_2365 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220773.1 2337855 D 380394 CDS YP_002220774.1 198284453 6878362 2338532..2339476 1 NC_011206.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aeh:Mlg_0063 tyrosine recombinase XerC; integrase family protein 2339476 6878362 Lferr_2366 Acidithiobacillus ferrooxidans ATCC 53993 integrase family protein YP_002220774.1 2338532 D 380394 CDS YP_002220775.1 198284454 6878363 2339473..2340012 1 NC_011206.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2340012 6878363 Lferr_2367 Acidithiobacillus ferrooxidans ATCC 53993 ATP-dependent protease peptidase subunit YP_002220775.1 2339473 D 380394 CDS YP_002220776.1 198284455 6878364 2340015..2341337 1 NC_011206.1 KEGG: hha:Hhal_1204 heat shock protein HslVU, ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 2341337 6878364 Lferr_2368 Acidithiobacillus ferrooxidans ATCC 53993 heat shock protein HslVU, ATPase subunit HslU YP_002220776.1 2340015 D 380394 CDS YP_002220777.1 198284456 6878365 complement(2341360..2341692) 1 NC_011206.1 PFAM: Domain of unknown function DUF1791; KEGG: dra:DR_0054 hypothetical protein; hypothetical protein 2341692 6878365 Lferr_2369 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220777.1 2341360 R 380394 CDS YP_002220778.1 198284457 6878366 complement(2341689..2342549) 1 NC_011206.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aha:AHA_0374 alternative sigma factor RpoH; RNA polymerase sigma-32 subunit RpoH 2342549 6878366 Lferr_2370 Acidithiobacillus ferrooxidans ATCC 53993 RNA polymerase sigma-32 subunit RpoH YP_002220778.1 2341689 R 380394 CDS YP_002220779.1 198284458 6878367 complement(2342693..2343598) 1 NC_011206.1 PFAM: protein of unknown function DUF214; KEGG: pfo:Pfl_5335 protein of unknown function DUF214; hypothetical protein 2343598 6878367 Lferr_2371 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220779.1 2342693 R 380394 CDS YP_002220780.1 198284459 6878368 complement(2343595..2344266) 1 NC_011206.1 KEGG: mmw:Mmwyl1_4327 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 2344266 6878368 Lferr_2372 Acidithiobacillus ferrooxidans ATCC 53993 cell division ATP-binding protein FtsE YP_002220780.1 2343595 R 380394 CDS YP_002220781.1 198284460 6878369 complement(2344263..2345294) 1 NC_011206.1 KEGG: csa:Csal_2989 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 2345294 6878369 Lferr_2373 Acidithiobacillus ferrooxidans ATCC 53993 signal recognition particle-docking protein FtsY YP_002220781.1 2344263 R 380394 CDS YP_002220782.1 198284461 6878370 2345417..2345986 1 NC_011206.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: sgl:SG0083 predicted methyltransferase; methyltransferase 2345986 6878370 Lferr_2374 Acidithiobacillus ferrooxidans ATCC 53993 methyltransferase YP_002220782.1 2345417 D 380394 CDS YP_002220783.1 198284462 6878371 2345979..2346503 1 NC_011206.1 KEGG: ppw:PputW619_0342 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 2346503 6878371 Lferr_2375 Acidithiobacillus ferrooxidans ATCC 53993 pantetheine-phosphate adenylyltransferase YP_002220783.1 2345979 D 380394 CDS YP_002220784.1 198284463 6878372 2346532..2346783 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc0391 probable ferredoxin protein; 4Fe-4S ferredoxin 2346783 6878372 Lferr_2376 Acidithiobacillus ferrooxidans ATCC 53993 4Fe-4S ferredoxin YP_002220784.1 2346532 D 380394 CDS YP_002220785.1 198284464 6878373 complement(2346767..2348746) 1 NC_011206.1 KEGG: azo:azo0760 hypothetical protein; hypothetical protein 2348746 6878373 Lferr_2377 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220785.1 2346767 R 380394 CDS YP_002220786.1 198284465 6878374 complement(2348763..2349575) 1 NC_011206.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2349575 6878374 Lferr_2378 Acidithiobacillus ferrooxidans ATCC 53993 formamidopyrimidine-DNA glycosylase YP_002220786.1 2348763 R 380394 CDS YP_002220787.1 198284466 6878375 complement(2349578..2350444) 1 NC_011206.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: bxe:Bxe_A0435 modification methylase HemK; protein-(glutamine-N5) methyltransferase 2350444 6878375 Lferr_2379 Acidithiobacillus ferrooxidans ATCC 53993 protein-(glutamine-N5) methyltransferase YP_002220787.1 2349578 R 380394 CDS YP_002220788.1 198284467 6878376 complement(2350434..2351531) 1 NC_011206.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mca:MCA1051 peptide chain release factor 1; peptide chain release factor 1 2351531 6878376 Lferr_2380 Acidithiobacillus ferrooxidans ATCC 53993 peptide chain release factor 1 YP_002220788.1 2350434 R 380394 CDS YP_002220789.1 198284468 6878377 complement(2351528..2352859) 1 NC_011206.1 TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; KEGG: noc:Noc_0510 glutamyl-tRNA reductase; glutamyl-tRNA reductase 2352859 6878377 Lferr_2381 Acidithiobacillus ferrooxidans ATCC 53993 glutamyl-tRNA reductase YP_002220789.1 2351528 R 380394 CDS YP_002220790.1 198284469 6878378 2352914..2354575 1 NC_011206.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: nmu:Nmul_A0586 hypothetical protein; hypothetical protein 2354575 6878378 Lferr_2382 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220790.1 2352914 D 380394 CDS YP_002220791.1 198284470 6878379 2354572..2355228 1 NC_011206.1 PFAM: outer membrane lipoprotein LolB; KEGG: azo:azo0757 conserved hypothetical outer membrane lipoprotein; outer membrane lipoprotein LolB 2355228 6878379 Lferr_2383 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane lipoprotein LolB YP_002220791.1 2354572 D 380394 CDS YP_002220792.1 198284471 6878380 2355225..2356070 1 NC_011206.1 KEGG: azo:azo0756 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2356070 6878380 Lferr_2384 Acidithiobacillus ferrooxidans ATCC 53993 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002220792.1 2355225 D 380394 CDS YP_002220793.1 198284472 6878382 2356198..2357145 1 NC_011206.1 KEGG: tbd:Tbd_0387 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2357145 6878382 Lferr_2385 Acidithiobacillus ferrooxidans ATCC 53993 ribose-phosphate pyrophosphokinase YP_002220793.1 2356198 D 380394 CDS YP_002220794.1 198284473 6878384 complement(2357312..2357494) 1 NC_011206.1 hypothetical protein 2357494 6878384 Lferr_2386 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220794.1 2357312 R 380394 CDS YP_002220795.1 198284474 6878386 complement(2357979..2358962) 1 NC_011206.1 PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: eba:ebA6362 putative endonuclease; restriction endonuclease 2358962 6878386 Lferr_2388 Acidithiobacillus ferrooxidans ATCC 53993 restriction endonuclease YP_002220795.1 2357979 R 380394 CDS YP_002220796.1 198284475 6878387 complement(2358955..2359146) 1 NC_011206.1 hypothetical protein 2359146 6878387 Lferr_2389 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220796.1 2358955 R 380394 CDS YP_002220797.1 198284476 6878388 2359179..2359331 1 NC_011206.1 hypothetical protein 2359331 6878388 Lferr_2390 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220797.1 2359179 D 380394 CDS YP_002220798.1 198284477 6878389 complement(2359455..2359742) 1 NC_011206.1 KEGG: neu:NE0498 PIN (PilT N terminus) domain; PIN (PilT N terminus) domain 2359742 6878389 Lferr_2391 Acidithiobacillus ferrooxidans ATCC 53993 PIN (PilT N terminus) domain YP_002220798.1 2359455 R 380394 CDS YP_002220799.1 198284478 6878390 complement(2359860..2360099) 1 NC_011206.1 KEGG: gvi:gsr4342 virulence-associated protein VapB homolog; virulence-associated protein VapB-like protein 2360099 6878390 Lferr_2392 Acidithiobacillus ferrooxidans ATCC 53993 virulence-associated protein VapB-like protein YP_002220799.1 2359860 R 380394 CDS YP_002220800.1 198284479 6878391 complement(2360280..2360549) 1 NC_011206.1 hypothetical protein 2360549 6878391 Lferr_2393 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220800.1 2360280 R 380394 CDS YP_002220801.1 198284480 6878393 2361624..2362943 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2362943 6878393 Lferr_2395 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220801.1 2361624 D 380394 CDS YP_002220802.1 198284481 6878394 2363065..2363379 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2363379 6878394 Lferr_2396 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220802.1 2363065 D 380394 CDS YP_002220803.1 198284482 6878396 complement(2364353..2365138) 1 NC_011206.1 PFAM: protein of unknown function DUF81; KEGG: gox:GOX0571 hypothetical protein; hypothetical protein 2365138 6878396 Lferr_2398 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220803.1 2364353 R 380394 CDS YP_002220804.1 198284483 6878398 complement(2365614..2366441) 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p1B267 transposition helper protein; IstB domain-containing ATP-binding protein 2366441 6878398 Lferr_2400 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002220804.1 2365614 R 380394 CDS YP_002220805.1 198284484 6878399 complement(2366438..2367922) 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: eba:p2A256 transposase; integrase catalytic subunit 2367922 6878399 Lferr_2401 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002220805.1 2366438 R 380394 CDS YP_002220806.1 198284485 6878400 complement(2369548..2370168) 1 NC_011206.1 KEGG: sus:Acid_4440 hypothetical protein; hypothetical protein 2370168 6878400 Lferr_2402 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220806.1 2369548 R 380394 CDS YP_002220807.1 198284486 6878401 complement(2370200..2370478) 1 NC_011206.1 KEGG: vei:Veis_2526 integrase, catalytic region; hypothetical protein 2370478 6878401 Lferr_2403 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220807.1 2370200 R 380394 CDS YP_002220808.1 198284487 6878402 complement(2370693..2372717) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: tbd:Tbd_2740 heavy metal translocating P-type ATPase; copper-translocating P-type ATPase 2372717 6878402 Lferr_2404 Acidithiobacillus ferrooxidans ATCC 53993 copper-translocating P-type ATPase YP_002220808.1 2370693 R 380394 CDS YP_002220809.1 198284488 6878403 complement(2372857..2373384) 1 NC_011206.1 hypothetical protein 2373384 6878403 Lferr_2405 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220809.1 2372857 R 380394 CDS YP_002220810.1 198284489 6878405 2373926..2374288 1 NC_011206.1 KEGG: tbd:Tbd_1332 hypothetical protein; hypothetical protein 2374288 6878405 Lferr_2407 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220810.1 2373926 D 380394 CDS YP_002220811.1 198284490 6878406 2374413..2374721 1 NC_011206.1 hypothetical protein 2374721 6878406 Lferr_2408 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220811.1 2374413 D 380394 CDS YP_002220812.1 198284491 6878407 2375132..2375995 1 NC_011206.1 KEGG: lpn:lpg1465 hypothetical protein; hypothetical protein 2375995 6878407 Lferr_2409 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220812.1 2375132 D 380394 CDS YP_002220813.1 198284492 6878408 complement(2376276..2377430) 1 NC_011206.1 KEGG: acr:Acry_0525 hypothetical protein; hypothetical protein 2377430 6878408 Lferr_2410 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220813.1 2376276 R 380394 CDS YP_002220814.1 198284493 6878409 2378338..2378691 1 NC_011206.1 PFAM: protein of unknown function DUF74; KEGG: acr:Acry_1752 protein of unknown function DUF74; hypothetical protein 2378691 6878409 Lferr_2411 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220814.1 2378338 D 380394 CDS YP_002220815.1 198284494 6878410 complement(2378811..2379593) 1 NC_011206.1 hypothetical protein 2379593 6878410 Lferr_2412 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220815.1 2378811 R 380394 CDS YP_002220816.1 198284495 6878411 complement(2379805..2382873) 1 NC_011206.1 KEGG: rrs:RoseRS_0281 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 2382873 6878411 Lferr_2413 Acidithiobacillus ferrooxidans ATCC 53993 HsdR family type I site-specific deoxyribonuclease YP_002220816.1 2379805 R 380394 CDS YP_002220817.1 198284496 6878412 complement(2382870..2383655) 1 NC_011206.1 hypothetical protein 2383655 6878412 Lferr_2414 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220817.1 2382870 R 380394 CDS YP_002220818.1 198284497 6878413 complement(2383643..2384899) 1 NC_011206.1 PFAM: restriction modification system DNA specificity domain; KEGG: mca:MCA0836 type I restriction-modification system, S subunit, EcoA family; restriction modification system DNA specificity protein 2384899 6878413 Lferr_2415 Acidithiobacillus ferrooxidans ATCC 53993 restriction modification system DNA specificity protein YP_002220818.1 2383643 R 380394 CDS YP_002220819.1 198284498 6878414 complement(2385039..2385260) 1 NC_011206.1 KEGG: sru:SRU_0644 hypothetical protein; hypothetical protein 2385260 6878414 Lferr_2416 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220819.1 2385039 R 380394 CDS YP_002220820.1 198284499 6878415 complement(2385295..2385561) 1 NC_011206.1 hypothetical protein 2385561 6878415 Lferr_2417 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220820.1 2385295 R 380394 CDS YP_002220821.1 198284500 6878416 complement(2385586..2387163) 1 NC_011206.1 PFAM: N-6 DNA methylase; KEGG: mhu:Mhun_2789 N-6 DNA methylase; N-6 DNA methylase 2387163 6878416 Lferr_2418 Acidithiobacillus ferrooxidans ATCC 53993 N-6 DNA methylase YP_002220821.1 2385586 R 380394 CDS YP_002220822.1 198284501 6878417 2387229..2387672 1 NC_011206.1 KEGG: bte:BTH_I2738 hypothetical protein; hypothetical protein 2387672 6878417 Lferr_2419 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220822.1 2387229 D 380394 CDS YP_002220823.1 198284502 6878418 complement(2388374..2389054) 1 NC_011206.1 SMART: regulatory protein ArsR; KEGG: lsp:Bsph_3331 hypothetical protein; ArsR family transcriptional regulator 2389054 6878418 Lferr_2420 Acidithiobacillus ferrooxidans ATCC 53993 ArsR family transcriptional regulator YP_002220823.1 2388374 R 380394 CDS YP_002220824.1 198284503 6878419 2389164..2389574 1 NC_011206.1 hypothetical protein 2389574 6878419 Lferr_2421 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220824.1 2389164 D 380394 CDS YP_002220825.1 198284504 6878420 2389672..2390208 1 NC_011206.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sus:Acid_4002 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2390208 6878420 Lferr_2422 Acidithiobacillus ferrooxidans ATCC 53993 methylated-DNA--protein-cysteine methyltransferase YP_002220825.1 2389672 D 380394 CDS YP_002220826.1 198284505 6878421 complement(2390246..2391736) 1 NC_011206.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: scl:sce6205 putative regulatory protein Ada; AraC family transcriptional regulator 2391736 6878421 Lferr_2423 Acidithiobacillus ferrooxidans ATCC 53993 AraC family transcriptional regulator YP_002220826.1 2390246 R 380394 CDS YP_002220827.1 198284506 6878422 2391968..2392366 1 NC_011206.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spu:584307 hypothetical LOC584307; Glyoxalase/bleomycin resistance protein/dioxygenase 2392366 6878422 Lferr_2424 Acidithiobacillus ferrooxidans ATCC 53993 Glyoxalase/bleomycin resistance protein/dioxygenase YP_002220827.1 2391968 D 380394 CDS YP_002220828.1 198284507 6878423 2392363..2393106 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2697 putative short-chain type dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2393106 6878423 Lferr_2425 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002220828.1 2392363 D 380394 CDS YP_002220829.1 198284508 6878424 complement(2393313..2393627) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2393627 6878424 Lferr_2426 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220829.1 2393313 R 380394 CDS YP_002220830.1 198284509 6878425 complement(2393749..2395068) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2395068 6878425 Lferr_2427 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220830.1 2393749 R 380394 CDS YP_002220831.1 198284510 6878426 2395235..2395564 1 NC_011206.1 PFAM: small multidrug resistance protein; KEGG: cbd:COXBU7E912_0802 quaternary ammonium compound-resistance protein QacE; small multidrug resistance protein 2395564 6878426 Lferr_2428 Acidithiobacillus ferrooxidans ATCC 53993 small multidrug resistance protein YP_002220831.1 2395235 D 380394 CDS YP_002220832.1 198284511 6878427 2395617..2396159 1 NC_011206.1 PFAM: NADPH-dependent FMN reductase; KEGG: hch:HCH_01405 predicted flavoprotein; NADPH-dependent FMN reductase 2396159 6878427 Lferr_2429 Acidithiobacillus ferrooxidans ATCC 53993 NADPH-dependent FMN reductase YP_002220832.1 2395617 D 380394 CDS YP_002220833.1 198284512 6878428 2396163..2396642 1 NC_011206.1 KEGG: cvi:CV_1605 hypothetical protein; hypothetical protein 2396642 6878428 Lferr_2430 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220833.1 2396163 D 380394 CDS YP_002220834.1 198284513 6878429 2396644..2397129 1 NC_011206.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: jan:Jann_1696 cupin 2 protein; cupin 2397129 6878429 Lferr_2431 Acidithiobacillus ferrooxidans ATCC 53993 cupin YP_002220834.1 2396644 D 380394 CDS YP_002220835.1 198284514 6878430 2397140..2397787 1 NC_011206.1 KEGG: rba:RB82 conserved hypothetical protein-putative cysteine protease; transglutaminase 2397787 6878430 Lferr_2432 Acidithiobacillus ferrooxidans ATCC 53993 transglutaminase YP_002220835.1 2397140 D 380394 CDS YP_002220836.1 198284515 6878431 2397801..2398457 1 NC_011206.1 PFAM: Negative transcriptional regulator; KEGG: hau:Haur_4597 FMN-binding negative transcriptional regulator; FMN-binding negative transcriptional regulator 2398457 6878431 Lferr_2433 Acidithiobacillus ferrooxidans ATCC 53993 FMN-binding negative transcriptional regulator YP_002220836.1 2397801 D 380394 CDS YP_002220837.1 198284516 6878432 complement(2398499..2398693) 1 NC_011206.1 hypothetical protein 2398693 6878432 Lferr_2434 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220837.1 2398499 R 380394 CDS YP_002220838.1 198284517 6878434 complement(2399025..2399330) 1 NC_011206.1 KEGG: mca:MCA0605 lipoprotein, putative; lipoprotein 2399330 6878434 Lferr_2436 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein YP_002220838.1 2399025 R 380394 CDS YP_002220839.1 198284518 6878435 2399734..2400312 1 NC_011206.1 KEGG: dge:Dgeo_0770 hypothetical protein; hypothetical protein 2400312 6878435 Lferr_2437 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220839.1 2399734 D 380394 CDS YP_002220840.1 198284519 6878436 complement(2400344..2401684) 1 NC_011206.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: aeh:Mlg_2542 Aminopeptidase P. Metallo peptidase. MEROPS family M24B; peptidase M24 2401684 6878436 Lferr_2438 Acidithiobacillus ferrooxidans ATCC 53993 peptidase M24 YP_002220840.1 2400344 R 380394 CDS YP_002220841.1 198284520 6878437 complement(2401807..2402247) 1 NC_011206.1 KEGG: ret:RHE_CH02664 hypothetical protein; hypothetical protein 2402247 6878437 Lferr_2439 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220841.1 2401807 R 380394 CDS YP_002220842.1 198284521 6878438 complement(2402417..2403775) 1 NC_011206.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2403775 6878438 Lferr_2440 Acidithiobacillus ferrooxidans ATCC 53993 DNA repair protein RadA YP_002220842.1 2402417 R 380394 CDS YP_002220843.1 198284522 6878439 complement(2403772..2404866) 1 NC_011206.1 KEGG: noc:Noc_0224 alanine racemase region; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2404866 6878439 Lferr_2441 Acidithiobacillus ferrooxidans ATCC 53993 alanine racemase YP_002220843.1 2403772 R 380394 CDS YP_002220844.1 198284523 6878440 complement(2404953..2406326) 1 NC_011206.1 KEGG: noc:Noc_0223 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 2406326 6878440 Lferr_2442 Acidithiobacillus ferrooxidans ATCC 53993 replicative DNA helicase YP_002220844.1 2404953 R 380394 CDS YP_002220845.1 198284524 6878441 complement(2406341..2406787) 1 NC_011206.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2406787 rplI 6878441 rplI Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L9 YP_002220845.1 2406341 R 380394 CDS YP_002220846.1 198284525 6878442 complement(2406825..2407739) 1 NC_011206.1 KEGG: aeh:Mlg_0585 hypothetical protein; hypothetical protein 2407739 6878442 Lferr_2444 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220846.1 2406825 R 380394 CDS YP_002220847.1 198284526 6878443 complement(2407755..2408033) 1 NC_011206.1 PFAM: ribosomal protein S18; KEGG: pau:PA14_65170 30S ribosomal protein S18; 30S ribosomal protein S18 2408033 6878443 Lferr_2445 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S18 YP_002220847.1 2407755 R 380394 CDS YP_002220848.1 198284527 6878444 complement(2408050..2408454) 1 NC_011206.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2408454 rpsF 6878444 rpsF Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S6 YP_002220848.1 2408050 R 380394 CDS YP_002220849.1 198284528 6878445 complement(2408579..2409643) 1 NC_011206.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: cvi:CV_2073 beta-hexosaminidase; glycoside hydrolase family protein 2409643 6878445 Lferr_2447 Acidithiobacillus ferrooxidans ATCC 53993 glycoside hydrolase family protein YP_002220849.1 2408579 R 380394 CDS YP_002220850.1 198284529 6878446 complement(2409627..2411768) 1 NC_011206.1 PFAM: amino acid permease-associated region; KEGG: cbu:CBU_1798 amino acid permease family protein; amino acid permease-associated protein 2411768 6878446 Lferr_2448 Acidithiobacillus ferrooxidans ATCC 53993 amino acid permease-associated protein YP_002220850.1 2409627 R 380394 CDS YP_002220851.1 198284530 6878447 complement(2411769..2412323) 1 NC_011206.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: hha:Hhal_1262 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2412323 6878447 Lferr_2449 Acidithiobacillus ferrooxidans ATCC 53993 ErfK/YbiS/YcfS/YnhG family protein YP_002220851.1 2411769 R 380394 CDS YP_002220852.1 198284531 6878448 complement(2412292..2413614) 1 NC_011206.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: putative RNA methylase; deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: bpa:BPP3051 23S rRNA 5-methyluridine methyltransferase; TrmA family RNA methyltransferase 2413614 6878448 Lferr_2450 Acidithiobacillus ferrooxidans ATCC 53993 TrmA family RNA methyltransferase YP_002220852.1 2412292 R 380394 CDS YP_002220853.1 198284532 6878449 complement(2413589..2414422) 1 NC_011206.1 KEGG: noc:Noc_0800 hypothetical protein; hypothetical protein 2414422 6878449 Lferr_2451 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220853.1 2413589 R 380394 CDS YP_002220854.1 198284533 6878450 complement(2414407..2415099) 1 NC_011206.1 KEGG: noc:Noc_0799 hypothetical protein; hypothetical protein 2415099 6878450 Lferr_2452 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220854.1 2414407 R 380394 CDS YP_002220855.1 198284534 6878451 complement(2415105..2417165) 1 NC_011206.1 KEGG: noc:Noc_0798 hypothetical protein; hypothetical protein 2417165 6878451 Lferr_2453 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220855.1 2415105 R 380394 CDS YP_002220856.1 198284535 6878452 complement(2417170..2418054) 1 NC_011206.1 TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mca:MCA1899 cysteine synthase B; cysteine synthase 2418054 6878452 Lferr_2454 Acidithiobacillus ferrooxidans ATCC 53993 cysteine synthase YP_002220856.1 2417170 R 380394 CDS YP_002220857.1 198284536 6878453 2418160..2418870 1 NC_011206.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: nmu:Nmul_A1628 6-phosphogluconolactonase; 6-phosphogluconolactonase 2418870 6878453 Lferr_2455 Acidithiobacillus ferrooxidans ATCC 53993 6-phosphogluconolactonase YP_002220857.1 2418160 D 380394 CDS YP_002220858.1 198284537 6878454 complement(2418944..2419882) 1 NC_011206.1 PFAM: band 7 protein; KEGG: bpt:Bpet2515 hypothetical protein; hypothetical protein 2419882 6878454 Lferr_2456 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220858.1 2418944 R 380394 CDS YP_002220859.1 198284538 6878455 complement(2419858..2420319) 1 NC_011206.1 PFAM: protein of unknown function DUF107; KEGG: nmc:NMC1115 hypothetical protein; hypothetical protein 2420319 6878455 Lferr_2457 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220859.1 2419858 R 380394 CDS YP_002220860.1 198284539 6878456 complement(2420335..2422542) 1 NC_011206.1 KEGG: mfa:Mfla_1367 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 2422542 6878456 Lferr_2458 Acidithiobacillus ferrooxidans ATCC 53993 1,4-alpha-glucan branching protein YP_002220860.1 2420335 R 380394 CDS YP_002220861.1 198284540 6878457 2422776..2424083 1 NC_011206.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: net:Neut_1292 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 2424083 6878457 Lferr_2459 Acidithiobacillus ferrooxidans ATCC 53993 glucose-1-phosphate adenylyltransferase YP_002220861.1 2422776 D 380394 CDS YP_002220862.1 198284541 6878458 2424089..2425795 1 NC_011206.1 PFAM: glycoside hydrolase family 57; KEGG: nmu:Nmul_A0719 glycoside hydrolase, family 57; glycoside hydrolase 2425795 6878458 Lferr_2460 Acidithiobacillus ferrooxidans ATCC 53993 glycoside hydrolase YP_002220862.1 2424089 D 380394 CDS YP_002220863.1 198284542 6878459 2425792..2427810 1 NC_011206.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; KEGG: neu:NE2032 glycosyl hydrolase family 57; 4-alpha-glucanotransferase 2427810 6878459 Lferr_2461 Acidithiobacillus ferrooxidans ATCC 53993 4-alpha-glucanotransferase YP_002220863.1 2425792 D 380394 CDS YP_002220864.1 198284543 6878460 2427803..2428750 1 NC_011206.1 PFAM: ROK family protein; KEGG: mfa:Mfla_1371 hypothetical protein; ROK family protein 2428750 6878460 Lferr_2462 Acidithiobacillus ferrooxidans ATCC 53993 ROK family protein YP_002220864.1 2427803 D 380394 CDS YP_002220865.1 198284544 6878461 2428750..2429559 1 NC_011206.1 KEGG: cpf:CPF_2893 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 2429559 6878461 Lferr_2463 Acidithiobacillus ferrooxidans ATCC 53993 glutamate racemase YP_002220865.1 2428750 D 380394 CDS YP_002220866.1 198284545 6878462 complement(2429572..2430864) 1 NC_011206.1 PFAM: protein of unknown function DUF445; KEGG: eba:ebA3091 hypothetical protein; hypothetical protein 2430864 6878462 Lferr_2464 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220866.1 2429572 R 380394 CDS YP_002220867.1 198284546 6878463 2431031..2431219 1 NC_011206.1 KEGG: bmn:BMA10247_A2104 hypothetical protein; hypothetical protein 2431219 6878463 Lferr_2465 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220867.1 2431031 D 380394 CDS YP_002220868.1 198284547 6878464 complement(2431362..2431832) 1 NC_011206.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_2424 single-strand binding protein; ssDNA-binding protein 2431832 6878464 Lferr_2466 Acidithiobacillus ferrooxidans ATCC 53993 ssDNA-binding protein YP_002220868.1 2431362 R 380394 CDS YP_002220869.1 198284548 6878465 2431919..2434723 1 NC_011206.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: tbd:Tbd_0436 excinuclease ABC, A subunit; excinuclease ABC subunit A 2434723 6878465 Lferr_2467 Acidithiobacillus ferrooxidans ATCC 53993 excinuclease ABC subunit A YP_002220869.1 2431919 D 380394 CDS YP_002220870.1 198284549 6878466 2434789..2435343 1 NC_011206.1 KEGG: tbd:Tbd_2708 hypothetical protein; hypothetical protein 2435343 6878466 Lferr_2468 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220870.1 2434789 D 380394 CDS YP_002220871.1 198284550 6878467 2435458..2436327 1 NC_011206.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_0519 thioredoxin; thioredoxin 2436327 6878467 Lferr_2469 Acidithiobacillus ferrooxidans ATCC 53993 thioredoxin YP_002220871.1 2435458 D 380394 CDS YP_002220872.1 198284551 6878468 2436464..2437984 1 NC_011206.1 KEGG: mca:MCA1467 serine protease, MucD; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2437984 6878468 Lferr_2470 Acidithiobacillus ferrooxidans ATCC 53993 protease Do YP_002220872.1 2436464 D 380394 CDS YP_002220873.1 198284552 6878469 complement(2438004..2438912) 1 NC_011206.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aeh:Mlg_1488 tyrosine recombinase XerD; tyrosine recombinase XerD 2438912 6878469 Lferr_2471 Acidithiobacillus ferrooxidans ATCC 53993 tyrosine recombinase XerD YP_002220873.1 2438004 R 380394 CDS YP_002220874.1 198284553 6878470 complement(2438964..2440199) 1 NC_011206.1 KEGG: rrs:RoseRS_3253 hypothetical protein; hypothetical protein 2440199 6878470 Lferr_2472 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220874.1 2438964 R 380394 CDS YP_002220875.1 198284554 6878471 complement(2440214..2440558) 1 NC_011206.1 PFAM: ribosomal protein L19; KEGG: shw:Sputw3181_2993 50S ribosomal protein L19; 50S ribosomal protein L19 2440558 6878471 Lferr_2473 Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L19 YP_002220875.1 2440214 R 380394 CDS YP_002220876.1 198284555 6878472 complement(2440581..2441324) 1 NC_011206.1 KEGG: ppw:PputW619_4155 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 2441324 6878472 Lferr_2474 Acidithiobacillus ferrooxidans ATCC 53993 tRNA (guanine-N1)-methyltransferase YP_002220876.1 2440581 R 380394 CDS YP_002220877.1 198284556 6878473 complement(2441324..2441806) 1 NC_011206.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: pap:PSPA7_1375 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 2441806 6878473 Lferr_2475 Acidithiobacillus ferrooxidans ATCC 53993 16S rRNA processing protein RimM YP_002220877.1 2441324 R 380394 CDS YP_002220878.1 198284557 6878474 complement(2441823..2442083) 1 NC_011206.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2442083 rpsP 6878474 rpsP Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S16 YP_002220878.1 2441823 R 380394 CDS YP_002220879.1 198284558 6878475 complement(2442154..2443530) 1 NC_011206.1 KEGG: saz:Sama_0888 signal recognition particle protein Ffh; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 2443530 6878475 Lferr_2477 Acidithiobacillus ferrooxidans ATCC 53993 signal recognition particle protein YP_002220879.1 2442154 R 380394 CDS YP_002220880.1 198284559 6878476 complement(2443637..2444350) 1 NC_011206.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_5598 NADPH-dependent FMN reductase; arsenical resistance protein ArsH 2444350 6878476 Lferr_2478 Acidithiobacillus ferrooxidans ATCC 53993 arsenical resistance protein ArsH YP_002220880.1 2443637 R 380394 CDS YP_002220881.1 198284560 6878477 complement(2444365..2445675) 1 NC_011206.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_1911 arsenical pump membrane protein; arsenical pump membrane protein 2445675 6878477 Lferr_2479 Acidithiobacillus ferrooxidans ATCC 53993 arsenical pump membrane protein YP_002220881.1 2444365 R 380394 CDS YP_002220882.1 198284561 6878478 2445769..2446125 1 NC_011206.1 PFAM: regulatory protein ArsR; KEGG: eba:ebB173 transcriptional regulator, ArsR family; arsR family transcriptional regulator 2446125 6878478 Lferr_2480 Acidithiobacillus ferrooxidans ATCC 53993 arsR family transcriptional regulator YP_002220882.1 2445769 D 380394 CDS YP_002220883.1 198284562 6878479 2446125..2446616 1 NC_011206.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rfr:Rfer_3666 protein tyrosine phosphatase; protein tyrosine phosphatase 2446616 6878479 Lferr_2481 Acidithiobacillus ferrooxidans ATCC 53993 protein tyrosine phosphatase YP_002220883.1 2446125 D 380394 CDS YP_002220884.1 198284563 6878480 2446864..2447901 1 NC_011206.1 PFAM: secretion protein HlyD family protein; KEGG: sfu:Sfum_2390 secretion protein HlyD family protein; secretion protein HlyD family protein 2447901 6878480 Lferr_2482 Acidithiobacillus ferrooxidans ATCC 53993 secretion protein HlyD family protein YP_002220884.1 2446864 D 380394 CDS YP_002220885.1 198284564 6878481 2447905..2449683 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_1795 ABC transporter related; ABC transporter-like protein 2449683 6878481 Lferr_2483 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220885.1 2447905 D 380394 CDS YP_002220886.1 198284565 6878482 2449680..2450795 1 NC_011206.1 PFAM: ABC-2 type transporter; KEGG: sfu:Sfum_2392 transcriptional regulator, fis family; ABC transporter 2450795 6878482 Lferr_2484 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter YP_002220886.1 2449680 D 380394 CDS YP_002220887.1 198284566 6878483 2450795..2451904 1 NC_011206.1 PFAM: ABC-2 type transporter; KEGG: sfu:Sfum_2393 ABC-2 type transporter; ABC transporter 2451904 6878483 Lferr_2485 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter YP_002220887.1 2450795 D 380394 CDS YP_002220888.1 198284567 6878484 2451945..2452256 1 NC_011206.1 hypothetical protein 2452256 6878484 Lferr_2486 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220888.1 2451945 D 380394 CDS YP_002220889.1 198284568 6878485 complement(2452268..2452549) 1 NC_011206.1 KEGG: tdn:Tmden_1057 hypothetical protein; hypothetical protein 2452549 6878485 Lferr_2487 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220889.1 2452268 R 380394 CDS YP_002220890.1 198284569 6878486 complement(2452777..2453019) 1 NC_011206.1 KEGG: mbu:Mbur_0102 hypothetical protein; hypothetical protein 2453019 6878486 Lferr_2488 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220890.1 2452777 R 380394 CDS YP_002220891.1 198284570 6878487 2453099..2453560 1 NC_011206.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: azo:azo3087 hypothetical protein; Hemerythrin HHE cation-binding domain-containing protein 2453560 6878487 Lferr_2489 Acidithiobacillus ferrooxidans ATCC 53993 Hemerythrin HHE cation-binding domain-containing protein YP_002220891.1 2453099 D 380394 CDS YP_002220892.1 198284571 6878488 2453553..2453999 1 NC_011206.1 PFAM: glycine cleavage H-protein; KEGG: aae:aq_944 glycine cleavage system protein H; glycine cleavage H-protein 2453999 6878488 Lferr_2490 Acidithiobacillus ferrooxidans ATCC 53993 glycine cleavage H-protein YP_002220892.1 2453553 D 380394 CDS YP_002220893.1 198284572 6878489 complement(2454045..2454554) 1 NC_011206.1 hypothetical protein 2454554 6878489 Lferr_2491 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220893.1 2454045 R 380394 CDS YP_002220894.1 198284573 6878490 complement(2454869..2455321) 1 NC_011206.1 PFAM: protein of unknown function DUF192; KEGG: swd:Swoo_0745 protein of unknown function DUF192; hypothetical protein 2455321 6878490 Lferr_2492 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220894.1 2454869 R 380394 CDS YP_002220895.1 198284574 6878491 complement(2456862..2457050) 1 NC_011206.1 hypothetical protein 2457050 6878491 Lferr_2493 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220895.1 2456862 R 380394 CDS YP_002220896.1 198284575 6878492 complement(2457452..2458375) 1 NC_011206.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00831 hypothetical transcription regulator protein; LysR family transcriptional regulator 2458375 6878492 Lferr_2494 Acidithiobacillus ferrooxidans ATCC 53993 LysR family transcriptional regulator YP_002220896.1 2457452 R 380394 CDS YP_002220897.1 198284576 6878493 2458584..2459111 1 NC_011206.1 KEGG: tbd:Tbd_1253 hypothetical protein; hypothetical protein 2459111 6878493 Lferr_2495 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220897.1 2458584 D 380394 CDS YP_002220898.1 198284577 6878495 complement(2459868..2462087) 1 NC_011206.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: mbn:Mboo_0635 hypothetical protein; DNA topoisomerase type IA zn finger domain-containing protein 2462087 6878495 Lferr_2497 Acidithiobacillus ferrooxidans ATCC 53993 DNA topoisomerase type IA zn finger domain-containing protein YP_002220898.1 2459868 R 380394 CDS YP_002220899.1 198284578 6878496 complement(2462084..2462848) 1 NC_011206.1 KEGG: mbn:Mboo_0636 hypothetical protein; hypothetical protein 2462848 6878496 Lferr_2498 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220899.1 2462084 R 380394 CDS YP_002220900.1 198284579 6878497 complement(2462855..2463532) 1 NC_011206.1 PFAM: von Willebrand factor type A; KEGG: ecv:APECO1_1163 hypothetical protein; hypothetical protein 2463532 6878497 Lferr_2499 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220900.1 2462855 R 380394 CDS YP_002220901.1 198284580 6878498 complement(2463685..2463840) 1 NC_011206.1 hypothetical protein 2463840 6878498 Lferr_2500 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220901.1 2463685 R 380394 CDS YP_002220902.1 198284581 6878499 complement(2463974..2464261) 1 NC_011206.1 KEGG: cph:Cpha266_2112 integrase, catalytic region; hypothetical protein 2464261 6878499 Lferr_2501 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220902.1 2463974 R 380394 CDS YP_002220903.1 198284582 6878500 complement(2464624..2465550) 1 NC_011206.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rso:RSc1369 putative DNA polymerase-related protein, bacteriophage-type; phage SPO1 DNA polymerase-like protein 2465550 6878500 Lferr_2502 Acidithiobacillus ferrooxidans ATCC 53993 phage SPO1 DNA polymerase-like protein YP_002220903.1 2464624 R 380394 CDS YP_002220904.1 198284583 6878501 2465717..2466787 1 NC_011206.1 PFAM: Choloylglycine hydrolase; KEGG: syf:Synpcc7942_2150 probable hydrolase; Choloylglycine hydrolase 2466787 6878501 Lferr_2503 Acidithiobacillus ferrooxidans ATCC 53993 Choloylglycine hydrolase YP_002220904.1 2465717 D 380394 CDS YP_002220905.1 198284584 6878502 complement(2466801..2466947) 1 NC_011206.1 hypothetical protein 2466947 6878502 Lferr_2504 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220905.1 2466801 R 380394 CDS YP_002220906.1 198284585 6878503 complement(2467000..2467308) 1 NC_011206.1 KEGG: gur:Gura_1479 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 2467308 6878503 Lferr_2505 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional modulator of MazE/toxin MazF YP_002220906.1 2467000 R 380394 CDS YP_002220907.1 198284586 6878504 complement(2467380..2467631) 1 NC_011206.1 PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1478 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 2467631 6878504 Lferr_2506 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator/antitoxin MazE YP_002220907.1 2467380 R 380394 CDS YP_002220908.1 198284587 6878505 2468161..2468532 1 NC_011206.1 hypothetical protein 2468532 6878505 Lferr_2507 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220908.1 2468161 D 380394 CDS YP_002220909.1 198284588 6878506 complement(2468635..2469051) 1 NC_011206.1 PFAM: PilT protein domain protein; KEGG: neu:NE1373 hypothetical protein; PilT protein domain-containing protein 2469051 6878506 Lferr_2508 Acidithiobacillus ferrooxidans ATCC 53993 PilT protein domain-containing protein YP_002220909.1 2468635 R 380394 CDS YP_002220910.1 198284589 6878507 complement(2469038..2469271) 1 NC_011206.1 PFAM: SpoVT/AbrB domain protein; KEGG: nmu:Nmul_A0985 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 2469271 6878507 Lferr_2509 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator/antitoxin MazE YP_002220910.1 2469038 R 380394 CDS YP_002220911.1 198284590 6878508 complement(2469312..2469605) 1 NC_011206.1 hypothetical protein 2469605 6878508 Lferr_2510 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220911.1 2469312 R 380394 CDS YP_002220912.1 198284591 6878509 2469627..2469977 1 NC_011206.1 KEGG: mfa:Mfla_0149 hypothetical protein; hypothetical protein 2469977 6878509 Lferr_2511 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220912.1 2469627 D 380394 CDS YP_002220913.1 198284592 6878510 2470074..2471936 1 NC_011206.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1199 ABC transporter related; ABC transporter-like protein 2471936 6878510 Lferr_2512 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220913.1 2470074 D 380394 CDS YP_002220914.1 198284593 6878511 complement(2471933..2472256) 1 NC_011206.1 hypothetical protein 2472256 6878511 Lferr_2513 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220914.1 2471933 R 380394 CDS YP_002220915.1 198284594 6878512 complement(2472249..2472560) 1 NC_011206.1 hypothetical protein 2472560 6878512 Lferr_2514 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220915.1 2472249 R 380394 CDS YP_002220916.1 198284595 6878513 complement(2472557..2474311) 1 NC_011206.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: hch:HCH_05889 penicillin-binding protein 2; peptidoglycan glycosyltransferase 2474311 6878513 Lferr_2515 Acidithiobacillus ferrooxidans ATCC 53993 peptidoglycan glycosyltransferase YP_002220916.1 2472557 R 380394 CDS YP_002220917.1 198284596 6878514 complement(2474460..2476520) 1 NC_011206.1 PFAM: O-antigen polymerase; KEGG: dol:Dole_1838 O-antigen polymerase; O-antigen polymerase 2476520 6878514 Lferr_2516 Acidithiobacillus ferrooxidans ATCC 53993 O-antigen polymerase YP_002220917.1 2474460 R 380394 CDS YP_002220918.1 198284597 6878516 complement(2476924..2477892) 1 NC_011206.1 PFAM: Polyprenyl synthetase; KEGG: kpn:KPN_03597 octaprenyl-diphosphate synthase; polyprenyl synthetase 2477892 6878516 Lferr_2517 Acidithiobacillus ferrooxidans ATCC 53993 polyprenyl synthetase YP_002220918.1 2476924 R 380394 CDS YP_002220919.1 198284598 6878517 complement(2478001..2478957) 1 NC_011206.1 KEGG: nmc:NMC1673 hypothetical protein; hypothetical protein 2478957 6878517 Lferr_2518 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220919.1 2478001 R 380394 CDS YP_002220920.1 198284599 6878518 complement(2479047..2480453) 1 NC_011206.1 KEGG: spl:Spea_3930 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 2480453 6878518 Lferr_2519 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen metabolism transcriptional regulator NtrC YP_002220920.1 2479047 R 380394 CDS YP_002220921.1 198284600 6878519 complement(2480450..2481535) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: aeh:Mlg_0015 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 2481535 6878519 Lferr_2520 Acidithiobacillus ferrooxidans ATCC 53993 signal transduction histidine kinase, nitrogen specific, NtrB YP_002220921.1 2480450 R 380394 CDS YP_002220922.1 198284601 6878520 2481845..2482615 1 NC_011206.1 KEGG: aeh:Mlg_0772 20S proteasome, A and B subunits; 20S proteasome subunits A and B 2482615 6878520 Lferr_2521 Acidithiobacillus ferrooxidans ATCC 53993 20S proteasome subunits A and B YP_002220922.1 2481845 D 380394 CDS YP_002220923.1 198284602 6878521 2482931..2484394 1 NC_011206.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: maq:Maqu_3035 protein of unknown function DUF404; hypothetical protein 2484394 6878521 Lferr_2522 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220923.1 2482931 D 380394 CDS YP_002220924.1 198284603 6878522 2484379..2485365 1 NC_011206.1 PFAM: protein of unknown function DUF403; KEGG: hch:HCH_00984 hypothetical protein; hypothetical protein 2485365 6878522 Lferr_2523 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220924.1 2484379 D 380394 CDS YP_002220925.1 198284604 6878523 2485405..2488767 1 NC_011206.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: sde:Sde_3099 transglutaminase-like superfamily domain protein; transglutaminase domain-containing protein 2488767 6878523 Lferr_2524 Acidithiobacillus ferrooxidans ATCC 53993 transglutaminase domain-containing protein YP_002220925.1 2485405 D 380394 CDS YP_002220926.1 198284605 6878524 2489225..2491159 1 NC_011206.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: azo:azo2073 PrkA protein; serine protein kinase PrkA 2491159 6878524 Lferr_2525 Acidithiobacillus ferrooxidans ATCC 53993 serine protein kinase PrkA YP_002220926.1 2489225 D 380394 CDS YP_002220927.1 198284606 6878525 2491440..2492756 1 NC_011206.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bte:BTH_I0408 ammonium transporter; ammonium transporter 2492756 6878525 Lferr_2526 Acidithiobacillus ferrooxidans ATCC 53993 ammonium transporter YP_002220927.1 2491440 D 380394 CDS YP_002220928.1 198284607 6878526 2492858..2494162 1 NC_011206.1 PFAM: protein of unknown function DUF444; KEGG: aeh:Mlg_1222 hypothetical protein; hypothetical protein 2494162 6878526 Lferr_2527 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220928.1 2492858 D 380394 CDS YP_002220929.1 198284608 6878527 2494155..2495630 1 NC_011206.1 PFAM: SpoVR family protein; KEGG: hch:HCH_01479 hypothetical protein; SpoVR family protein 2495630 6878527 Lferr_2528 Acidithiobacillus ferrooxidans ATCC 53993 SpoVR family protein YP_002220929.1 2494155 D 380394 CDS YP_002220930.1 198284609 6878528 2495812..2496984 1 NC_011206.1 KEGG: mrd:Mrad2831_2268 hypothetical protein; hypothetical protein 2496984 6878528 Lferr_2529 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220930.1 2495812 D 380394 CDS YP_002220931.1 198284610 6878529 2497038..2497376 1 NC_011206.1 PFAM: nitrogen regulatory protein P-II; KEGG: bxe:Bxe_A4190 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 2497376 6878529 Lferr_2530 Acidithiobacillus ferrooxidans ATCC 53993 nitrogen regulatory protein P-II YP_002220931.1 2497038 D 380394 CDS YP_002220932.1 198284611 6878530 2497431..2498735 1 NC_011206.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: osa:4324937 hypothetical protein; ammonium transporter 2498735 6878530 Lferr_2531 Acidithiobacillus ferrooxidans ATCC 53993 ammonium transporter YP_002220932.1 2497431 D 380394 CDS YP_002220933.1 198284612 6878531 2498834..2499547 1 NC_011206.1 PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0585 hypothetical protein; glutamine amidotransferase 2499547 6878531 Lferr_2532 Acidithiobacillus ferrooxidans ATCC 53993 glutamine amidotransferase YP_002220933.1 2498834 D 380394 CDS YP_002220934.1 198284613 6878532 complement(2499552..2499938) 1 NC_011206.1 hypothetical protein 2499938 6878532 Lferr_2533 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220934.1 2499552 R 380394 CDS YP_002220935.1 198284614 6878533 2500186..2500557 1 NC_011206.1 PFAM: 17 kDa surface antigen; KEGG: bba:Bd2769 putative outer membrane protein; 17 kDa surface antigen 2500557 6878533 Lferr_2534 Acidithiobacillus ferrooxidans ATCC 53993 17 kDa surface antigen YP_002220935.1 2500186 D 380394 CDS YP_002220936.1 198284615 6878534 2500875..2501960 1 NC_011206.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pla:Plav_3108 rare lipoprotein A; rare lipoprotein A 2501960 6878534 Lferr_2535 Acidithiobacillus ferrooxidans ATCC 53993 rare lipoprotein A YP_002220936.1 2500875 D 380394 CDS YP_002220937.1 198284616 6878535 complement(2501941..2502249) 1 NC_011206.1 KEGG: ppu:PP_1576 immunity protein, putative; hypothetical protein 2502249 6878535 Lferr_2536 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220937.1 2501941 R 380394 CDS YP_002220938.1 198284617 6878536 complement(2502246..2503562) 1 NC_011206.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: acr:Acry_0391 TrkA-N domain protein; voltage-gated potassium channel 2503562 6878536 Lferr_2537 Acidithiobacillus ferrooxidans ATCC 53993 voltage-gated potassium channel YP_002220938.1 2502246 R 380394 CDS YP_002220939.1 198284618 6878537 complement(2503674..2504921) 1 NC_011206.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: acr:Acry_0248 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2504921 6878537 Lferr_2538 Acidithiobacillus ferrooxidans ATCC 53993 serine-type D-Ala-D-Ala carboxypeptidase YP_002220939.1 2503674 R 380394 CDS YP_002220940.1 198284619 6878538 complement(2504955..2506574) 1 NC_011206.1 PFAM: phosphoglucose isomerase (PGI); KEGG: gvi:gll1692 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 2506574 6878538 Lferr_2539 Acidithiobacillus ferrooxidans ATCC 53993 glucose-6-phosphate isomerase YP_002220940.1 2504955 R 380394 CDS YP_002220941.1 198284620 6878539 2507018..2508709 1 NC_011206.1 PFAM: glycosyl transferase family 39; KEGG: cte:CT0363 hypothetical protein; glycosyl transferase 2508709 6878539 Lferr_2540 Acidithiobacillus ferrooxidans ATCC 53993 glycosyl transferase YP_002220941.1 2507018 D 380394 CDS YP_002220942.1 198284621 6878540 2508823..2509200 1 NC_011206.1 PFAM: Camphor resistance CrcB protein; KEGG: acr:Acry_0304 CrcB protein; camphor resistance protein CrcB 2509200 6878540 Lferr_2541 Acidithiobacillus ferrooxidans ATCC 53993 camphor resistance protein CrcB YP_002220942.1 2508823 D 380394 CDS YP_002220943.1 198284622 6878541 2509211..2509528 1 NC_011206.1 PFAM: protein of unknown function DUF190; KEGG: mca:MCA1930 hypothetical protein; hypothetical protein 2509528 6878541 Lferr_2542 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220943.1 2509211 D 380394 CDS YP_002220944.1 198284623 6878542 2509622..2510500 1 NC_011206.1 KEGG: pfu:PF1418 hypothetical protein; hypothetical protein 2510500 6878542 Lferr_2543 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220944.1 2509622 D 380394 CDS YP_002220945.1 198284624 6878543 2510602..2511861 1 NC_011206.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_5666 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2511861 6878543 Lferr_2544 Acidithiobacillus ferrooxidans ATCC 53993 cyclopropane-fatty-acyl-phospholipid synthase YP_002220945.1 2510602 D 380394 CDS YP_002220946.1 198284625 6878544 2511955..2512536 1 NC_011206.1 PFAM: protein of unknown function DUF1211; KEGG: dar:Daro_3436 protein of unknown function DUF1211; hypothetical protein 2512536 6878544 Lferr_2545 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220946.1 2511955 D 380394 CDS YP_002220947.1 198284626 6878545 2512667..2516059 1 NC_011206.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: dac:Daci_0520 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 2516059 6878545 Lferr_2546 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease V subunit gamma YP_002220947.1 2512667 D 380394 CDS YP_002220948.1 198284627 6878546 2516056..2519652 1 NC_011206.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: dac:Daci_0521 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 2519652 6878546 Lferr_2547 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease V subunit beta YP_002220948.1 2516056 D 380394 CDS YP_002220949.1 198284628 6878547 2519649..2521601 1 NC_011206.1 KEGG: dac:Daci_0522 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 2521601 6878547 Lferr_2548 Acidithiobacillus ferrooxidans ATCC 53993 exodeoxyribonuclease V subunit alpha YP_002220949.1 2519649 D 380394 CDS YP_002220950.1 198284629 6878548 2521764..2521892 1 NC_011206.1 hypothetical protein 2521892 6878548 Lferr_2549 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220950.1 2521764 D 380394 CDS YP_002220951.1 198284630 6878549 2521874..2522698 1 NC_011206.1 PFAM: transcriptional regulator domain protein; KEGG: eba:ebA3019 phosphate regulon transcriptional regulatory protein PhoB; winged helix family two component transcriptional regulator 2522698 6878549 Lferr_2550 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002220951.1 2521874 D 380394 CDS YP_002220952.1 198284631 6878550 2522883..2525216 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_3609 TonB-dependent receptor; TonB-dependent receptor 2525216 6878550 Lferr_2551 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220952.1 2522883 D 380394 CDS YP_002220953.1 198284632 6878551 2525412..2527775 1 NC_011206.1 PFAM: TonB-dependent receptor; KEGG: acr:Acry_3609 TonB-dependent receptor; TonB-dependent receptor 2527775 6878551 Lferr_2552 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002220953.1 2525412 D 380394 CDS YP_002220954.1 198284633 6878552 2527969..2528547 1 NC_011206.1 KEGG: mag:amb1922 hypothetical protein; hypothetical protein 2528547 6878552 Lferr_2553 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220954.1 2527969 D 380394 CDS YP_002220955.1 198284634 6878553 complement(2528692..2528937) 1 NC_011206.1 hypothetical protein 2528937 6878553 Lferr_2554 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220955.1 2528692 R 380394 CDS YP_002220956.1 198284635 6878554 complement(2528986..2529090) 1 NC_011206.1 hypothetical protein 2529090 6878554 Lferr_2555 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220956.1 2528986 R 380394 CDS YP_002220957.1 198284636 6878555 complement(2529341..2531917) 1 NC_011206.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pna:Pnap_3565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily P-type ATPase 2531917 6878555 Lferr_2556 Acidithiobacillus ferrooxidans ATCC 53993 HAD superfamily P-type ATPase YP_002220957.1 2529341 R 380394 CDS YP_002220958.1 198284637 6878556 2531923..2532081 1 NC_011206.1 hypothetical protein 2532081 6878556 Lferr_2557 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220958.1 2531923 D 380394 CDS YP_002220959.1 198284638 6878557 complement(2532066..2532491) 1 NC_011206.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: abo:ABO_1531 methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2532491 6878557 Lferr_2558 Acidithiobacillus ferrooxidans ATCC 53993 methionine-R-sulfoxide reductase YP_002220959.1 2532066 R 380394 CDS YP_002220960.1 198284639 6878558 complement(2532497..2533132) 1 NC_011206.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: abo:ABO_1530 methionine sulfoxide peptide reductase; peptide methionine sulfoxide reductase 2533132 6878558 Lferr_2559 Acidithiobacillus ferrooxidans ATCC 53993 peptide methionine sulfoxide reductase YP_002220960.1 2532497 R 380394 CDS YP_002220961.1 198284640 6878559 2533245..2534153 1 NC_011206.1 KEGG: maq:Maqu_1397 transcriptional regulator, fis family; hypothetical protein 2534153 6878559 Lferr_2560 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220961.1 2533245 D 380394 CDS YP_002220962.1 198284641 6878560 2534213..2534869 1 NC_011206.1 KEGG: tbd:Tbd_2441 nicotinate-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 2534869 6878560 Lferr_2561 Acidithiobacillus ferrooxidans ATCC 53993 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_002220962.1 2534213 D 380394 CDS YP_002220963.1 198284642 6878561 2534893..2535249 1 NC_011206.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: pap:PSPA7_1104 hypothetical protein; iojap family protein 2535249 6878561 Lferr_2562 Acidithiobacillus ferrooxidans ATCC 53993 iojap family protein YP_002220963.1 2534893 D 380394 CDS YP_002220964.1 198284643 6878562 2535256..2535729 1 NC_011206.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2535729 6878562 Lferr_2563 Acidithiobacillus ferrooxidans ATCC 53993 rRNA large subunit methyltransferase YP_002220964.1 2535256 D 380394 CDS YP_002220965.1 198284644 6878563 2535737..2536174 1 NC_011206.1 hypothetical protein 2536174 6878563 Lferr_2564 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220965.1 2535737 D 380394 CDS YP_002220966.1 198284645 6878564 2536171..2537052 1 NC_011206.1 KEGG: uma:UM01093.1 hypothetical protein; hypothetical protein 2537052 6878564 Lferr_2565 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220966.1 2536171 D 380394 CDS YP_002220967.1 198284646 6878565 2537049..2537636 1 NC_011206.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: psp:PSPPH_4169 Maf-like protein; maf protein 2537636 6878565 Lferr_2566 Acidithiobacillus ferrooxidans ATCC 53993 maf protein YP_002220967.1 2537049 D 380394 CDS YP_002220968.1 198284647 6878566 2537633..2539123 1 NC_011206.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: noc:Noc_2657 ribonuclease E and G; Rne/Rng family ribonuclease 2539123 6878566 Lferr_2567 Acidithiobacillus ferrooxidans ATCC 53993 Rne/Rng family ribonuclease YP_002220968.1 2537633 D 380394 CDS YP_002220969.1 198284648 6878567 complement(2539149..2540522) 1 NC_011206.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: mfa:Mfla_1055 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 2540522 6878567 Lferr_2568 Acidithiobacillus ferrooxidans ATCC 53993 two component sigma-54 specific Fis family transcriptional regulator YP_002220969.1 2539149 R 380394 CDS YP_002220970.1 198284649 6878568 complement(2540529..2540840) 1 NC_011206.1 hypothetical protein 2540840 6878568 Lferr_2569 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220970.1 2540529 R 380394 CDS YP_002220971.1 198284650 6878569 complement(2540821..2542368) 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: noc:Noc_0783 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2542368 6878569 Lferr_2570 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002220971.1 2540821 R 380394 CDS YP_002220972.1 198284651 6878570 complement(2542543..2542773) 1 NC_011206.1 KEGG: mms:mma_2155 hypothetical protein; hypothetical protein 2542773 6878570 Lferr_2571 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220972.1 2542543 R 380394 CDS YP_002220973.1 198284652 6878571 complement(2543064..2543345) 1 NC_011206.1 PFAM: Fe(II) trafficking protein YggX; KEGG: aeh:Mlg_2696 hypothetical protein; hypothetical protein 2543345 6878571 Lferr_2572 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220973.1 2543064 R 380394 CDS YP_002220974.1 198284653 6878572 2543797..2545269 1 NC_011206.1 KEGG: mfa:Mfla_1268 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2545269 6878572 Lferr_2573 Acidithiobacillus ferrooxidans ATCC 53993 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002220974.1 2543797 D 380394 CDS YP_002220975.1 198284654 6878573 2545290..2546405 1 NC_011206.1 KEGG: cph:Cpha266_2346 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 2546405 6878573 Lferr_2574 Acidithiobacillus ferrooxidans ATCC 53993 lipopolysaccharide biosynthesis protein YP_002220975.1 2545290 D 380394 CDS YP_002220976.1 198284655 6878574 2546456..2547589 1 NC_011206.1 PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_A3868 hypothetical protein; ABC transporter 2547589 6878574 Lferr_2575 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter YP_002220976.1 2546456 D 380394 CDS YP_002220977.1 198284656 6878575 2547586..2548239 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0776 ABC transporter related; ABC transporter-like protein 2548239 6878575 Lferr_2576 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220977.1 2547586 D 380394 CDS YP_002220978.1 198284657 6878576 2548331..2549080 1 NC_011206.1 TIGRFAM: methyltransferase FkbM family; KEGG: bte:BTH_I1328 methyltransferase, FkbM family domain protein; FkbM family methyltransferase 2549080 6878576 Lferr_2577 Acidithiobacillus ferrooxidans ATCC 53993 FkbM family methyltransferase YP_002220978.1 2548331 D 380394 CDS YP_002220979.1 198284658 6878577 2549132..2549773 1 NC_011206.1 hypothetical protein 2549773 6878577 Lferr_2578 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220979.1 2549132 D 380394 CDS YP_002220980.1 198284659 6878578 2549795..2551624 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_0758 glycosyl transferase, group 1; group 1 glycosyl transferase 2551624 6878578 Lferr_2579 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002220980.1 2549795 D 380394 CDS YP_002220981.1 198284660 6878579 complement(2551797..2552111) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2552111 6878579 Lferr_2580 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002220981.1 2551797 R 380394 CDS YP_002220982.1 198284661 6878580 complement(2552233..2553552) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2553552 6878580 Lferr_2581 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220982.1 2552233 R 380394 CDS YP_002220983.1 198284662 6878581 2553599..2557597 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: mtp:Mthe_1073 glycosyl transferase, group 1; group 1 glycosyl transferase 2557597 6878581 Lferr_2582 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002220983.1 2553599 D 380394 CDS YP_002220984.1 198284663 6878582 2557607..2559256 1 NC_011206.1 KEGG: bte:BTH_I1346 hypothetical protein; hypothetical protein 2559256 6878582 Lferr_2583 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220984.1 2557607 D 380394 CDS YP_002220985.1 198284664 6878583 2559295..2560071 1 NC_011206.1 KEGG: psp:PSPPH_1694 hypothetical protein; hypothetical protein 2560071 6878583 Lferr_2584 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220985.1 2559295 D 380394 CDS YP_002220986.1 198284665 6878584 2560226..2561107 1 NC_011206.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2561107 6878584 Lferr_2585 Acidithiobacillus ferrooxidans ATCC 53993 sulfate adenylyltransferase subunit 2 YP_002220986.1 2560226 D 380394 CDS YP_002220987.1 198284666 6878585 2561107..2562951 1 NC_011206.1 KEGG: hmo:HM1_1168 sulfate adenylate transferase, large subunit/adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit 2562951 6878585 Lferr_2586 Acidithiobacillus ferrooxidans ATCC 53993 sulfate adenylyltransferase large subunit YP_002220987.1 2561107 D 380394 CDS YP_002220988.1 198284667 6878586 2562980..2563837 1 NC_011206.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: tdn:Tmden_0646 3(2),5 -bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 2563837 6878586 Lferr_2587 Acidithiobacillus ferrooxidans ATCC 53993 3'(2'),5'-bisphosphate nucleotidase YP_002220988.1 2562980 D 380394 CDS YP_002220989.1 198284668 6878587 2563815..2565572 1 NC_011206.1 KEGG: cbb:CLD_2360 hypothetical protein; hypothetical protein 2565572 6878587 Lferr_2588 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220989.1 2563815 D 380394 CDS YP_002220990.1 198284669 6878588 2565631..2566824 1 NC_011206.1 PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_A3859 polysaccharide export protein; polysaccharide export protein 2566824 6878588 Lferr_2589 Acidithiobacillus ferrooxidans ATCC 53993 polysaccharide export protein YP_002220990.1 2565631 D 380394 CDS YP_002220991.1 198284670 6878589 2566838..2568007 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1326 glycosyltransferase, putative; group 1 glycosyl transferase 2568007 6878589 Lferr_2590 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002220991.1 2566838 D 380394 CDS YP_002220992.1 198284671 6878590 2568004..2568156 1 NC_011206.1 hypothetical protein 2568156 6878590 Lferr_2591 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220992.1 2568004 D 380394 CDS YP_002220993.1 198284672 6878591 2568153..2569172 1 NC_011206.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: aae:aq_1082 GDP-D-mannose dehydratase; GDP-mannose 4,6-dehydratase 2569172 6878591 Lferr_2592 Acidithiobacillus ferrooxidans ATCC 53993 GDP-mannose 4,6-dehydratase YP_002220993.1 2568153 D 380394 CDS YP_002220994.1 198284673 6878592 2569203..2569955 1 NC_011206.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: amr:AM1_1895 hypothetical protein; type 11 methyltransferase 2569955 6878592 Lferr_2593 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002220994.1 2569203 D 380394 CDS YP_002220995.1 198284674 6878593 2569964..2570782 1 NC_011206.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: psp:PSPPH_0956 WbbD; type 11 methyltransferase 2570782 6878593 Lferr_2594 Acidithiobacillus ferrooxidans ATCC 53993 type 11 methyltransferase YP_002220995.1 2569964 D 380394 CDS YP_002220996.1 198284675 6878594 2570826..2571122 1 NC_011206.1 hypothetical protein 2571122 6878594 Lferr_2595 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220996.1 2570826 D 380394 CDS YP_002220997.1 198284676 6878595 2571521..2571763 1 NC_011206.1 TIGRFAM: prevent-host-death family protein; KEGG: mes:Meso_4551 prevent-host-death family protein; prevent-host-death family protein 2571763 6878595 Lferr_2596 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002220997.1 2571521 D 380394 CDS YP_002220998.1 198284677 6878596 2571763..2572215 1 NC_011206.1 KEGG: pnu:Pnuc_0693 PilT protein domain protein; hypothetical protein 2572215 6878596 Lferr_2597 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002220998.1 2571763 D 380394 CDS YP_002220999.1 198284678 6878597 complement(2572340..2574196) 1 NC_011206.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2516 ABC transporter-related protein; ABC transporter-like protein 2574196 6878597 Lferr_2598 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002220999.1 2572340 R 380394 CDS YP_002221000.1 198284679 6878598 complement(2574258..2574710) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tbd:Tbd_1275 hypothetical protein; N-acetyltransferase GCN5 2574710 6878598 Lferr_2599 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002221000.1 2574258 R 380394 CDS YP_002221001.1 198284680 6878599 complement(2574719..2576221) 1 NC_011206.1 PFAM: extracellular solute-binding protein family 5; KEGG: acr:Acry_1185 extracellular solute-binding protein, family 5; family 5 extracellular solute-binding protein 2576221 6878599 Lferr_2600 Acidithiobacillus ferrooxidans ATCC 53993 family 5 extracellular solute-binding protein YP_002221001.1 2574719 R 380394 CDS YP_002221002.1 198284681 6878600 complement(2576457..2577467) 1 NC_011206.1 KEGG: mxa:MXAN_4664 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2577467 6878600 Lferr_2601 Acidithiobacillus ferrooxidans ATCC 53993 oligopeptide/dipeptide ABC transporter ATPase YP_002221002.1 2576457 R 380394 CDS YP_002221003.1 198284682 6878601 complement(2577464..2578531) 1 NC_011206.1 KEGG: azc:AZC_1983 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2578531 6878601 Lferr_2602 Acidithiobacillus ferrooxidans ATCC 53993 oligopeptide/dipeptide ABC transporter ATPase YP_002221003.1 2577464 R 380394 CDS YP_002221004.1 198284683 6878602 complement(2578533..2579444) 1 NC_011206.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_1187 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2579444 6878602 Lferr_2603 Acidithiobacillus ferrooxidans ATCC 53993 binding-protein-dependent transport system inner membrane protein YP_002221004.1 2578533 R 380394 CDS YP_002221005.1 198284684 6878603 complement(2579437..2580399) 1 NC_011206.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_1186 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2580399 6878603 Lferr_2604 Acidithiobacillus ferrooxidans ATCC 53993 binding-protein-dependent transport system inner membrane protein YP_002221005.1 2579437 R 380394 CDS YP_002221006.1 198284685 6878604 complement(2580442..2582085) 1 NC_011206.1 PFAM: extracellular solute-binding protein family 5; KEGG: acr:Acry_1185 extracellular solute-binding protein, family 5; family 5 extracellular solute-binding protein 2582085 6878604 Lferr_2605 Acidithiobacillus ferrooxidans ATCC 53993 family 5 extracellular solute-binding protein YP_002221006.1 2580442 R 380394 CDS YP_002221007.1 198284686 6878605 complement(2582082..2583923) 1 NC_011206.1 KEGG: spe:Spro_2485 hypothetical protein; hypothetical protein 2583923 6878605 Lferr_2606 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221007.1 2582082 R 380394 CDS YP_002221008.1 198284687 6878606 complement(2583916..2585859) 1 NC_011206.1 KEGG: spe:Spro_2485 hypothetical protein; hypothetical protein 2585859 6878606 Lferr_2607 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221008.1 2583916 R 380394 CDS YP_002221009.1 198284688 6878607 2586764..2589238 1 NC_011206.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1075 TonB-dependent outer membrane receptor; TonB-dependent receptor 2589238 6878607 Lferr_2608 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002221009.1 2586764 D 380394 CDS YP_002221010.1 198284689 6878608 2589278..2589952 1 NC_011206.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: vco:VC0395_A1620 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 2589952 6878608 Lferr_2609 Acidithiobacillus ferrooxidans ATCC 53993 multiple antibiotic resistance (MarC)-like protein YP_002221010.1 2589278 D 380394 CDS YP_002221011.1 198284690 6878609 2589971..2591038 1 NC_011206.1 PFAM: Lactate/malate dehydrogenase; KEGG: mja:MJ0490 malate dehydrogenase; lactate/malate dehydrogenase 2591038 6878609 Lferr_2610 Acidithiobacillus ferrooxidans ATCC 53993 lactate/malate dehydrogenase YP_002221011.1 2589971 D 380394 CDS YP_002221012.1 198284691 6878610 2591026..2591298 1 NC_011206.1 PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 2591298 6878610 Lferr_2611 Acidithiobacillus ferrooxidans ATCC 53993 amino acid-binding ACT domain-containing protein YP_002221012.1 2591026 D 380394 CDS YP_002221013.1 198284692 6878611 2591370..2592065 1 NC_011206.1 KEGG: acr:Acry_1184 TonB family protein; hypothetical protein 2592065 6878611 Lferr_2612 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221013.1 2591370 D 380394 CDS YP_002221014.1 198284693 6878612 2592103..2592750 1 NC_011206.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: acr:Acry_3610 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2592750 6878612 Lferr_2613 Acidithiobacillus ferrooxidans ATCC 53993 MotA/TolQ/ExbB proton channel YP_002221014.1 2592103 D 380394 CDS YP_002221015.1 198284694 6878613 2592782..2593180 1 NC_011206.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2593180 6878613 Lferr_2614 Acidithiobacillus ferrooxidans ATCC 53993 biopolymer transport protein ExbD/TolR YP_002221015.1 2592782 D 380394 CDS YP_002221016.1 198284695 6878614 2593213..2593695 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB1390 putative acetyltransferase; N-acetyltransferase GCN5 2593695 6878614 Lferr_2615 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002221016.1 2593213 D 380394 CDS YP_002221017.1 198284696 6878615 2594171..2595745 1 NC_011206.1 PFAM: glycosyl transferase group 1; KEGG: bmn:BMA10247_2181 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2595745 6878615 Lferr_2616 Acidithiobacillus ferrooxidans ATCC 53993 group 1 glycosyl transferase YP_002221017.1 2594171 D 380394 CDS YP_002221018.1 198284697 6878616 2595967..2603427 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: bbr:BB2918 putative type I polyketide synthase; Beta-ketoacyl synthase 2603427 6878616 Lferr_2617 Acidithiobacillus ferrooxidans ATCC 53993 Beta-ketoacyl synthase YP_002221018.1 2595967 D 380394 CDS YP_002221019.1 198284698 6878617 2603429..2604754 1 NC_011206.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; Orn/Lys/Arg decarboxylase major region; aminotransferase class I and II; aminotransferase class-III; KEGG: bpt:Bpet2310 hypothetical protein; 8-amino-7-oxononanoate synthase 2604754 6878617 Lferr_2618 Acidithiobacillus ferrooxidans ATCC 53993 8-amino-7-oxononanoate synthase YP_002221019.1 2603429 D 380394 CDS YP_002221020.1 198284699 6878618 2604823..2605866 1 NC_011206.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mes:Meso_2755 capsule polysaccharide biosynthesis; capsular polysaccharide biosynthesis protein 2605866 6878618 Lferr_2619 Acidithiobacillus ferrooxidans ATCC 53993 capsular polysaccharide biosynthesis protein YP_002221020.1 2604823 D 380394 CDS YP_002221021.1 198284700 6878619 2605863..2607173 1 NC_011206.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: bpa:BPP2954 capsular polysaccharide export protein; capsular polysaccharide biosynthesis protein 2607173 6878619 Lferr_2620 Acidithiobacillus ferrooxidans ATCC 53993 capsular polysaccharide biosynthesis protein YP_002221021.1 2605863 D 380394 CDS YP_002221022.1 198284701 6878620 2607182..2607853 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: net:Neut_1974 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2607853 6878620 Lferr_2621 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002221022.1 2607182 D 380394 CDS YP_002221023.1 198284702 6878621 2607846..2609438 1 NC_011206.1 PFAM: sulfatase; KEGG: neu:NE1332 possible capsular polysaccharide biosynthesis/export transmembrane; sulfatase 2609438 6878621 Lferr_2622 Acidithiobacillus ferrooxidans ATCC 53993 sulfatase YP_002221023.1 2607846 D 380394 CDS YP_002221024.1 198284703 6878622 complement(2609412..2610521) 1 NC_011206.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; helix-hairpin-helix motif; HhH-GPD family protein; KEGG: dar:Daro_0064 A/G-specific adenine glycosylase MutY; A/G-specific adenine glycosylase 2610521 6878622 Lferr_2623 Acidithiobacillus ferrooxidans ATCC 53993 A/G-specific adenine glycosylase YP_002221024.1 2609412 R 380394 CDS YP_002221025.1 198284704 6878623 complement(2610518..2611768) 1 NC_011206.1 KEGG: csa:Csal_2712 protein of unknown function DUF748; hypothetical protein 2611768 6878623 Lferr_2624 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221025.1 2610518 R 380394 CDS YP_002221026.1 198284705 6878624 complement(2611788..2613500) 1 NC_011206.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: noc:Noc_2800 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2613500 6878624 Lferr_2625 Acidithiobacillus ferrooxidans ATCC 53993 phosphoenolpyruvate-protein phosphotransferase YP_002221026.1 2611788 R 380394 CDS YP_002221027.1 198284706 6878625 complement(2613497..2613769) 1 NC_011206.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: azo:azo3781 putative phosphocarrier protein HPr; PTS system phosphocarrier protein HPr 2613769 6878625 Lferr_2626 Acidithiobacillus ferrooxidans ATCC 53993 PTS system phosphocarrier protein HPr YP_002221027.1 2613497 R 380394 CDS YP_002221028.1 198284707 6878626 complement(2613766..2613876) 1 NC_011206.1 hypothetical protein 2613876 6878626 Lferr_2627 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221028.1 2613766 R 380394 CDS YP_002221029.1 198284708 6878627 complement(2613877..2614293) 1 NC_011206.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mms:mma_0173 IIA component of sugar transport PTS system; PTS system fructose subfamily transporter subunit IIA 2614293 6878627 Lferr_2628 Acidithiobacillus ferrooxidans ATCC 53993 PTS system fructose subfamily transporter subunit IIA YP_002221029.1 2613877 R 380394 CDS YP_002221030.1 198284709 6878628 complement(2614290..2615189) 1 NC_011206.1 PFAM: conserved hypothetical protein; KEGG: nmu:Nmul_A0081 uncharacterized P-loop ATPase protein UPF0042; hypothetical protein 2615189 6878628 Lferr_2629 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221030.1 2614290 R 380394 CDS YP_002221031.1 198284710 6878629 complement(2615189..2616121) 1 NC_011206.1 PFAM: HPr serine kinase domain protein; KEGG: mfa:Mfla_0144 HPr kinase/phosphorylase; HPr kinase 2616121 6878629 Lferr_2630 Acidithiobacillus ferrooxidans ATCC 53993 HPr kinase YP_002221031.1 2615189 R 380394 CDS YP_002221032.1 198284711 6878630 complement(2616176..2616622) 1 NC_011206.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: reu:Reut_A0353 PTS IIA-like nitrogen-regulatory protein PtsN; PTS IIA-like nitrogen-regulatory protein PtsN 2616622 6878630 Lferr_2631 Acidithiobacillus ferrooxidans ATCC 53993 PTS IIA-like nitrogen-regulatory protein PtsN YP_002221032.1 2616176 R 380394 CDS YP_002221033.1 198284712 6878631 complement(2616629..2616970) 1 NC_011206.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: tbd:Tbd_0532 possible sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 2616970 6878631 Lferr_2632 Acidithiobacillus ferrooxidans ATCC 53993 sigma 54 modulation protein/30S ribosomal protein S30EA YP_002221033.1 2616629 R 380394 CDS YP_002221034.1 198284713 6878632 complement(2617074..2618501) 1 NC_011206.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: sde:Sde_3179 RNA polymerase factor sigma-54; RNA polymerase sigma-54 subunit RpoN 2618501 6878632 Lferr_2633 Acidithiobacillus ferrooxidans ATCC 53993 RNA polymerase sigma-54 subunit RpoN YP_002221034.1 2617074 R 380394 CDS YP_002221035.1 198284714 6878633 complement(2618514..2619239) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_3457 ABC transporter related; ABC transporter-like protein 2619239 6878633 Lferr_2634 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002221035.1 2618514 R 380394 CDS YP_002221036.1 198284715 6878634 complement(2619236..2619784) 1 NC_011206.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: gme:Gmet_1281 OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 2619784 6878634 Lferr_2635 Acidithiobacillus ferrooxidans ATCC 53993 lipopolysaccharide transport periplasmic protein LptA YP_002221036.1 2619236 R 380394 CDS YP_002221037.1 198284716 6878635 complement(2619756..2620325) 1 NC_011206.1 PFAM: protein of unknown function DUF1239; KEGG: saz:Sama_3085 hypothetical protein; hypothetical protein 2620325 6878635 Lferr_2636 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221037.1 2619756 R 380394 CDS YP_002221038.1 198284717 6878636 complement(2620351..2620893) 1 NC_011206.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: gur:Gura_2976 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2620893 6878636 Lferr_2637 Acidithiobacillus ferrooxidans ATCC 53993 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002221038.1 2620351 R 380394 CDS YP_002221039.1 198284718 6878637 complement(2620902..2621888) 1 NC_011206.1 KEGG: aeh:Mlg_2225 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 2621888 6878637 Lferr_2638 Acidithiobacillus ferrooxidans ATCC 53993 KpsF/GutQ family protein YP_002221039.1 2620902 R 380394 CDS YP_002221040.1 198284719 6878638 complement(2621898..2622176) 1 NC_011206.1 hypothetical protein 2622176 6878638 Lferr_2639 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221040.1 2621898 R 380394 CDS YP_002221041.1 198284720 6878639 complement(2622208..2622642) 1 NC_011206.1 hypothetical protein 2622642 6878639 Lferr_2640 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221041.1 2622208 R 380394 CDS YP_002221042.1 198284721 6878640 complement(2622632..2623321) 1 NC_011206.1 PFAM: Nucleotidyl transferase; KEGG: mca:MCA0599 nucleotidyltransferase family protein; nucleotidyl transferase 2623321 6878640 Lferr_2641 Acidithiobacillus ferrooxidans ATCC 53993 nucleotidyl transferase YP_002221042.1 2622632 R 380394 CDS YP_002221043.1 198284722 6878641 complement(2623294..2624322) 1 NC_011206.1 PFAM: aminoglycoside phosphotransferase; KEGG: maq:Maqu_3511 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2624322 6878641 Lferr_2642 Acidithiobacillus ferrooxidans ATCC 53993 aminoglycoside phosphotransferase YP_002221043.1 2623294 R 380394 CDS YP_002221044.1 198284723 6878642 2624352..2626535 1 NC_011206.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: bur:Bcep18194_A6038 organic solvent tolerance protein; organic solvent tolerance protein 2626535 6878642 Lferr_2643 Acidithiobacillus ferrooxidans ATCC 53993 organic solvent tolerance protein YP_002221044.1 2624352 D 380394 CDS YP_002221045.1 198284724 6878643 2626535..2627968 1 NC_011206.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: noc:Noc_1723 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain 2627968 6878643 Lferr_2644 Acidithiobacillus ferrooxidans ATCC 53993 SurA domain YP_002221045.1 2626535 D 380394 CDS YP_002221046.1 198284725 6878644 2627961..2628767 1 NC_011206.1 PFAM: ABC-2 type transporter; KEGG: bam:Bamb_0339 ABC-2 type transporter; ABC transporter 2628767 6878644 Lferr_2645 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter YP_002221046.1 2627961 D 380394 CDS YP_002221047.1 198284726 6878645 2628778..2629110 1 NC_011206.1 PFAM: BolA family protein; KEGG: mfa:Mfla_0244 BolA-like protein; BolA family protein 2629110 6878645 Lferr_2646 Acidithiobacillus ferrooxidans ATCC 53993 BolA family protein YP_002221047.1 2628778 D 380394 CDS YP_002221048.1 198284727 6878646 2629142..2629474 1 NC_011206.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: nmu:Nmul_A2639 glutaredoxin-related protein; glutaredoxin-like protein 2629474 6878646 Lferr_2647 Acidithiobacillus ferrooxidans ATCC 53993 glutaredoxin-like protein YP_002221048.1 2629142 D 380394 CDS YP_002221049.1 198284728 6878647 2629484..2630755 1 NC_011206.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2630755 6878647 Lferr_2648 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002221049.1 2629484 D 380394 CDS YP_002221050.1 198284729 6878648 2630752..2631399 1 NC_011206.1 KEGG: bpd:BURPS668_3667 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 2631399 6878648 Lferr_2649 Acidithiobacillus ferrooxidans ATCC 53993 ATP phosphoribosyltransferase YP_002221050.1 2630752 D 380394 CDS YP_002221051.1 198284730 6878649 2631396..2632697 1 NC_011206.1 PFAM: histidinol dehydrogenase; KEGG: pmy:Pmen_0884 histidinol dehydrogenase; histidinol dehydrogenase 2632697 6878649 Lferr_2650 Acidithiobacillus ferrooxidans ATCC 53993 histidinol dehydrogenase YP_002221051.1 2631396 D 380394 CDS YP_002221052.1 198284731 6878650 2632694..2633773 1 NC_011206.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: nmu:Nmul_A0818 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 2633773 6878650 Lferr_2651 Acidithiobacillus ferrooxidans ATCC 53993 histidinol-phosphate aminotransferase YP_002221052.1 2632694 D 380394 CDS YP_002221053.1 198284732 6878651 2633770..2634369 1 NC_011206.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: abo:ABO_2281 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 2634369 6878651 Lferr_2652 Acidithiobacillus ferrooxidans ATCC 53993 imidazoleglycerol-phosphate dehydratase YP_002221053.1 2633770 D 380394 CDS YP_002221054.1 198284733 6878652 2634366..2635037 1 NC_011206.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2635037 hisH 6878652 hisH Acidithiobacillus ferrooxidans ATCC 53993 imidazole glycerol phosphate synthase subunit HisH YP_002221054.1 2634366 D 380394 CDS YP_002221055.1 198284734 6878653 2635077..2635805 1 NC_011206.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2635805 6878653 Lferr_2654 Acidithiobacillus ferrooxidans ATCC 53993 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002221055.1 2635077 D 380394 CDS YP_002221056.1 198284735 6878654 2635810..2636571 1 NC_011206.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2636571 6878654 Lferr_2655 Acidithiobacillus ferrooxidans ATCC 53993 imidazole glycerol phosphate synthase subunit HisF YP_002221056.1 2635810 D 380394 CDS YP_002221057.1 198284736 6878655 2636658..2637350 1 NC_011206.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: syg:sync_1899 histidine biosynthesis bifunctional protein HisIE; phosphoribosyl-ATP diphosphatase 2637350 6878655 Lferr_2656 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosyl-ATP diphosphatase YP_002221057.1 2636658 D 380394 CDS YP_002221058.1 198284737 6878656 2637430..2637648 1 NC_011206.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cps:CPS_0163 Sec-independent protein translocase protein TatA; twin-arginine translocation protein, TatA/E family subunit 2637648 6878656 Lferr_2657 Acidithiobacillus ferrooxidans ATCC 53993 twin-arginine translocation protein, TatA/E family subunit YP_002221058.1 2637430 D 380394 CDS YP_002221059.1 198284738 6878657 2637655..2638023 1 NC_011206.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: prw:PsycPRwf_0715 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 2638023 6878657 Lferr_2658 Acidithiobacillus ferrooxidans ATCC 53993 twin-arginine translocation protein subunit TatB YP_002221059.1 2637655 D 380394 CDS YP_002221060.1 198284739 6878658 2638162..2638968 1 NC_011206.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mgm:Mmc1_1617 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 2638968 6878658 Lferr_2659 Acidithiobacillus ferrooxidans ATCC 53993 Sec-independent protein translocase subunit TatC YP_002221060.1 2638162 D 380394 CDS YP_002221061.1 198284740 6878659 2639264..2640685 1 NC_011206.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 2640685 rbcL 6878659 rbcL Acidithiobacillus ferrooxidans ATCC 53993 ribulose bisophosphate carboxylase YP_002221061.1 2639264 D 380394 CDS YP_002221062.1 198284741 6878660 2640716..2641072 1 NC_011206.1 PFAM: ribulose bisphosphate carboxylase small chain; KEGG: tbd:Tbd_2623 ribulose-bisphosphate carboxylase form I small chain; ribulose-bisphosphate carboxylase 2641072 6878660 Lferr_2661 Acidithiobacillus ferrooxidans ATCC 53993 ribulose-bisphosphate carboxylase YP_002221062.1 2640716 D 380394 CDS YP_002221063.1 198284742 6878661 2641228..2642031 1 NC_011206.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: neu:NE1919 nitric oxide reductase NorQ protein; CbbQ/NirQ/NorQ domain-containing protein 2642031 6878661 Lferr_2662 Acidithiobacillus ferrooxidans ATCC 53993 CbbQ/NirQ/NorQ domain-containing protein YP_002221063.1 2641228 D 380394 CDS YP_002221064.1 198284743 6878662 2642083..2644401 1 NC_011206.1 PFAM: von Willebrand factor type A; KEGG: neu:NE1918 von Willebrand factor type A domain; hypothetical protein 2644401 6878662 Lferr_2663 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221064.1 2642083 D 380394 CDS YP_002221065.1 198284744 6878663 2644679..2647303 1 NC_011206.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; KEGG: azo:azo3061 GGDEF/EAL/PAS/PAC/GAF-domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2647303 6878663 Lferr_2664 Acidithiobacillus ferrooxidans ATCC 53993 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_002221065.1 2644679 D 380394 CDS YP_002221066.1 198284745 6878664 complement(2647426..2648700) 1 NC_011206.1 KEGG: hha:Hhal_0942 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase 2648700 6878664 Lferr_2665 Acidithiobacillus ferrooxidans ATCC 53993 dihydroorotase YP_002221066.1 2647426 R 380394 CDS YP_002221067.1 198284746 6878665 complement(2648706..2649689) 1 NC_011206.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2649689 pyrB 6878665 pyrB Acidithiobacillus ferrooxidans ATCC 53993 aspartate carbamoyltransferase catalytic subunit YP_002221067.1 2648706 R 380394 CDS YP_002221068.1 198284747 6878666 complement(2649686..2650192) 1 NC_011206.1 PFAM: phosphoribosyltransferase; KEGG: aeh:Mlg_0347 pyrimidine regulatory protein PyrR; phosphoribosyltransferase 2650192 6878666 Lferr_2667 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosyltransferase YP_002221068.1 2649686 R 380394 CDS YP_002221069.1 198284748 6878667 complement(2650189..2650620) 1 NC_011206.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: ngo:NGO0568 Holliday junction resolvase-like protein; Holliday junction resolvase YqgF 2650620 6878667 Lferr_2668 Acidithiobacillus ferrooxidans ATCC 53993 Holliday junction resolvase YqgF YP_002221069.1 2650189 R 380394 CDS YP_002221070.1 198284749 6878668 complement(2650613..2651170) 1 NC_011206.1 PFAM: protein of unknown function DUF179; KEGG: mca:MCA2336 hypothetical protein; hypothetical protein 2651170 6878668 Lferr_2669 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221070.1 2650613 R 380394 CDS YP_002221071.1 198284750 6878669 complement(2651240..2652178) 1 NC_011206.1 KEGG: cbd:COXBU7E912_0106 glutathione synthase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase 2652178 6878669 Lferr_2670 Acidithiobacillus ferrooxidans ATCC 53993 glutathione synthetase YP_002221071.1 2651240 R 380394 CDS YP_002221072.1 198284751 6878670 complement(2652175..2653485) 1 NC_011206.1 TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: tbd:Tbd_2408 glutamate--cysteine ligase GshA; glutamate/cysteine ligase 2653485 6878670 Lferr_2671 Acidithiobacillus ferrooxidans ATCC 53993 glutamate/cysteine ligase YP_002221072.1 2652175 R 380394 CDS YP_002221073.1 198284752 6878671 complement(2653495..2654655) 1 NC_011206.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 2654655 6878671 Lferr_2672 Acidithiobacillus ferrooxidans ATCC 53993 citrate synthase YP_002221073.1 2653495 R 380394 CDS YP_002221074.1 198284753 6878672 complement(2654848..2655222) 1 NC_011206.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: azo:azo2758 hypothetical protein; iron-sulfur cluster assembly accessory protein 2655222 6878672 Lferr_2673 Acidithiobacillus ferrooxidans ATCC 53993 iron-sulfur cluster assembly accessory protein YP_002221074.1 2654848 R 380394 CDS YP_002221075.1 198284754 6878673 complement(2655352..2658303) 1 NC_011206.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; E3 binding domain protein; KEGG: tbd:Tbd_0652 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component; hypothetical protein 2658303 6878673 Lferr_2674 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221075.1 2655352 R 380394 CDS YP_002221076.1 198284755 6878674 complement(2658359..2659339) 1 NC_011206.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: tbd:Tbd_0654 pyruvate dehydrogenase E1 beta subunit; transketolase central region 2659339 6878674 Lferr_2675 Acidithiobacillus ferrooxidans ATCC 53993 transketolase central region YP_002221076.1 2658359 R 380394 CDS YP_002221077.1 198284756 6878675 complement(2659332..2660315) 1 NC_011206.1 KEGG: tbd:Tbd_0655 dehydrogenase complex, E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 2660315 6878675 Lferr_2676 Acidithiobacillus ferrooxidans ATCC 53993 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha YP_002221077.1 2659332 R 380394 CDS YP_002221078.1 198284757 6878676 complement(2660704..2660982) 1 NC_011206.1 KEGG: mag:amb4299 hypothetical protein; hypothetical protein 2660982 6878676 Lferr_2677 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221078.1 2660704 R 380394 CDS YP_002221079.1 198284758 6878677 complement(2661052..2661396) 1 NC_011206.1 KEGG: rso:RSc1969 probable transmembrane protein; hypothetical protein 2661396 6878677 Lferr_2678 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221079.1 2661052 R 380394 CDS YP_002221080.1 198284759 6878678 complement(2661661..2662695) 1 NC_011206.1 KEGG: hch:HCH_06245 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 2662695 6878678 Lferr_2679 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyl-gamma-glutamyl-phosphate reductase YP_002221080.1 2661661 R 380394 CDS YP_002221081.1 198284760 6878679 complement(2662779..2663165) 1 NC_011206.1 PFAM: ribosomal protein S9; KEGG: spe:Spro_4348 ribosomal protein S9; 30S ribosomal protein S9 2663165 6878679 Lferr_2680 Acidithiobacillus ferrooxidans ATCC 53993 30S ribosomal protein S9 YP_002221081.1 2662779 R 380394 CDS YP_002221082.1 198284761 6878680 complement(2663178..2663606) 1 NC_011206.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2663606 rplM 6878680 rplM Acidithiobacillus ferrooxidans ATCC 53993 50S ribosomal protein L13 YP_002221082.1 2663178 R 380394 CDS YP_002221083.1 198284762 6878681 2663667..2664161 1 NC_011206.1 hypothetical protein 2664161 6878681 Lferr_2682 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221083.1 2663667 D 380394 CDS YP_002221084.1 198284763 6878682 2664201..2664635 1 NC_011206.1 hypothetical protein 2664635 6878682 Lferr_2683 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221084.1 2664201 D 380394 CDS YP_002221085.1 198284764 6878683 complement(2665027..2665239) 1 NC_011206.1 KEGG: dsh:Dshi_2965 hypothetical protein; hypothetical protein 2665239 6878683 Lferr_2684 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221085.1 2665027 R 380394 CDS YP_002221086.1 198284765 6878690 complement(2671420..2672637) 1 NC_011206.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: cbd:COXBU7E912_1919 tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 2672637 6878690 Lferr_2686 Acidithiobacillus ferrooxidans ATCC 53993 tyrosyl-tRNA synthetase YP_002221086.1 2671420 R 380394 CDS YP_002221087.1 198284766 6878691 complement(2672743..2675034) 1 NC_011206.1 KEGG: mse:Msed_0505 plasma-membrane proton-efflux P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; HAD superfamily P-type ATPase 2675034 6878691 Lferr_2687 Acidithiobacillus ferrooxidans ATCC 53993 HAD superfamily P-type ATPase YP_002221087.1 2672743 R 380394 CDS YP_002221088.1 198284767 6878692 2675275..2675658 1 NC_011206.1 KEGG: mfa:Mfla_0594 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 2675658 6878692 Lferr_2688 Acidithiobacillus ferrooxidans ATCC 53993 aspartate 1-decarboxylase YP_002221088.1 2675275 D 380394 CDS YP_002221089.1 198284768 6878693 2675707..2676900 1 NC_011206.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_0722 major facilitator superfamily MFS_1; major facilitator superfamily protein 2676900 6878693 Lferr_2689 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002221089.1 2675707 D 380394 CDS YP_002221090.1 198284769 6878694 2677059..2677745 1 NC_011206.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2677745 engB 6878694 engB Acidithiobacillus ferrooxidans ATCC 53993 ribosome biogenesis GTP-binding protein YsxC YP_002221090.1 2677059 D 380394 CDS YP_002221091.1 198284770 6878695 2677811..2679073 1 NC_011206.1 PFAM: TrkA-N domain protein; Ion transport protein; Ion transport 2 domain protein; KEGG: acr:Acry_0391 TrkA-N domain protein; voltage-gated potassium channel 2679073 6878695 Lferr_2691 Acidithiobacillus ferrooxidans ATCC 53993 voltage-gated potassium channel YP_002221091.1 2677811 D 380394 CDS YP_002221092.1 198284771 6878696 complement(2679076..2681775) 1 NC_011206.1 KEGG: aeh:Mlg_2860 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 2681775 6878696 Lferr_2692 Acidithiobacillus ferrooxidans ATCC 53993 DNA polymerase I YP_002221092.1 2679076 R 380394 CDS YP_002221093.1 198284772 6878697 2681845..2682564 1 NC_011206.1 PFAM: conserved hypothetical protein; KEGG: aeh:Mlg_2861 conserved hypothetical protein 730; hypothetical protein 2682564 6878697 Lferr_2693 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221093.1 2681845 D 380394 CDS YP_002221094.1 198284773 6878698 2682585..2682920 1 NC_011206.1 KEGG: azo:azo3602 conserved hypothetical secreted protein; hypothetical protein 2682920 6878698 Lferr_2694 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221094.1 2682585 D 380394 CDS YP_002221095.1 198284774 6878699 2682963..2683895 1 NC_011206.1 KEGG: nmu:Nmul_A0565 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase 2683895 6878699 Lferr_2695 Acidithiobacillus ferrooxidans ATCC 53993 homoserine kinase YP_002221095.1 2682963 D 380394 CDS YP_002221096.1 198284775 6878700 complement(2683934..2684257) 1 NC_011206.1 hypothetical protein 2684257 6878700 Lferr_2696 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221096.1 2683934 R 380394 CDS YP_002221097.1 198284776 6878701 2684460..2685062 1 NC_011206.1 KEGG: mag:amb1922 hypothetical protein; hypothetical protein 2685062 6878701 Lferr_2697 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221097.1 2684460 D 380394 CDS YP_002221098.1 198284777 6878702 complement(2685073..2685480) 1 NC_011206.1 KEGG: dar:Daro_0466 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; competence protein ComEA 2685480 6878702 Lferr_2698 Acidithiobacillus ferrooxidans ATCC 53993 competence protein ComEA YP_002221098.1 2685073 R 380394 CDS YP_002221099.1 198284778 6878703 complement(2685499..2687628) 1 NC_011206.1 PFAM: UvrD/REP helicase; KEGG: aha:AHA_0220 DNA helicase II; UvrD/REP helicase 2687628 6878703 Lferr_2699 Acidithiobacillus ferrooxidans ATCC 53993 UvrD/REP helicase YP_002221099.1 2685499 R 380394 CDS YP_002221100.1 198284779 6878704 2687745..2688677 1 NC_011206.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: aeh:Mlg_2130 heat shock protein DnaJ domain protein; chaperone DnaJ domain-containing protein 2688677 6878704 Lferr_2700 Acidithiobacillus ferrooxidans ATCC 53993 chaperone DnaJ domain-containing protein YP_002221100.1 2687745 D 380394 CDS YP_002221101.1 198284780 6878705 2688702..2688998 1 NC_011206.1 KEGG: noc:Noc_1383 transcriptional regulator, MerR family; merR family transcriptional regulator 2688998 6878705 Lferr_2701 Acidithiobacillus ferrooxidans ATCC 53993 merR family transcriptional regulator YP_002221101.1 2688702 D 380394 CDS YP_002221102.1 198284781 6878706 2688995..2689663 1 NC_011206.1 PFAM: phosphoribosyltransferase; KEGG: nmu:Nmul_A0900 phosphoribosyltransferase; phosphoribosyltransferase 2689663 6878706 Lferr_2702 Acidithiobacillus ferrooxidans ATCC 53993 phosphoribosyltransferase YP_002221102.1 2688995 D 380394 CDS YP_002221103.1 198284782 6878707 2689667..2691397 1 NC_011206.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: mca:MCA1213 hypothetical protein; PHP domain-containing protein 2691397 6878707 Lferr_2703 Acidithiobacillus ferrooxidans ATCC 53993 PHP domain-containing protein YP_002221103.1 2689667 D 380394 CDS YP_002221104.1 198284783 6878709 2692440..2693222 1 NC_011206.1 PFAM: cytochrome c class I; KEGG: tbd:Tbd_0187 cytochrome c oxidase; cytochrome c class I 2693222 6878709 Lferr_2705 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c class I YP_002221104.1 2692440 D 380394 CDS YP_002221105.1 198284784 6878710 2693215..2694006 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: maq:Maqu_2497 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2694006 6878710 Lferr_2706 Acidithiobacillus ferrooxidans ATCC 53993 short-chain dehydrogenase/reductase SDR YP_002221105.1 2693215 D 380394 CDS YP_002221106.1 198284785 6878711 2694105..2694725 1 NC_011206.1 KEGG: tbd:Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2694725 6878711 Lferr_2707 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_002221106.1 2694105 D 380394 CDS YP_002221107.1 198284786 6878712 2694753..2695961 1 NC_011206.1 PFAM: Cytochrome b/b6 domain; KEGG: noc:Noc_0298 cytochrome b/b6-like; cytochrome b/b6 domain-containing protein 2695961 6878712 Lferr_2708 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome b/b6 domain-containing protein YP_002221107.1 2694753 D 380394 CDS YP_002221108.1 198284787 6878713 2695958..2696686 1 NC_011206.1 PFAM: cytochrome c1; KEGG: xom:XOO_2600 ubiquinol cytochrome c oxidoreductase; cytochrome c1 2696686 6878713 Lferr_2709 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c1 YP_002221108.1 2695958 D 380394 CDS YP_002221109.1 198284788 6878714 2697239..2699083 1 NC_011206.1 PFAM: ResB family protein; KEGG: tcx:Tcr_0048 ResB-like; ResB family protein 2699083 6878714 Lferr_2710 Acidithiobacillus ferrooxidans ATCC 53993 ResB family protein YP_002221109.1 2697239 D 380394 CDS YP_002221110.1 198284789 6878715 2699076..2700263 1 NC_011206.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: tcx:Tcr_0049 cytochrome c assembly protein; cytochrome c-type biogenesis protein CcsB 2700263 6878715 Lferr_2711 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c-type biogenesis protein CcsB YP_002221110.1 2699076 D 380394 CDS YP_002221111.1 198284790 6878716 2700443..2700808 1 NC_011206.1 KEGG: aae:aq_401 hypothetical protein; hypothetical protein 2700808 6878716 Lferr_2712 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221111.1 2700443 D 380394 CDS YP_002221112.1 198284791 6878717 complement(2702314..2702799) 1 NC_011206.1 KEGG: aae:aq_2087 putative protein; hypothetical protein 2702799 6878717 Lferr_2713 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221112.1 2702314 R 380394 CDS YP_002221113.1 198284792 6878718 2703374..2703760 1 NC_011206.1 KEGG: mag:amb1815 hypothetical protein; hypothetical protein 2703760 6878718 Lferr_2714 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221113.1 2703374 D 380394 CDS YP_002221114.1 198284793 6878719 2703804..2704034 1 NC_011206.1 PFAM: SirA family protein; KEGG: mag:amb1816 predicted redox protein, regulator of disulfide bond formation; SirA family protein 2704034 6878719 Lferr_2715 Acidithiobacillus ferrooxidans ATCC 53993 SirA family protein YP_002221114.1 2703804 D 380394 CDS YP_002221115.1 198284794 6878720 2704077..2705216 1 NC_011206.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb1817 uncharacterized NAD(FAD)-dependent dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2705216 6878720 Lferr_2716 Acidithiobacillus ferrooxidans ATCC 53993 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_002221115.1 2704077 D 380394 CDS YP_002221116.1 198284795 6878721 2705229..2705855 1 NC_011206.1 KEGG: mag:amb1818 hypothetical protein; hypothetical protein 2705855 6878721 Lferr_2717 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221116.1 2705229 D 380394 CDS YP_002221117.1 198284796 6878722 2705982..2706260 1 NC_011206.1 hypothetical protein 2706260 6878722 Lferr_2718 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221117.1 2705982 D 380394 CDS YP_002221118.1 198284797 6878723 2706558..2706872 1 NC_011206.1 KEGG: tcx:Tcr_0831 hypothetical protein; hypothetical protein 2706872 6878723 Lferr_2719 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221118.1 2706558 D 380394 CDS YP_002221119.1 198284798 6878724 2707224..2708990 1 NC_011206.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: noc:Noc_1305 sulphite reductase (NADPH) flavoprotein, alpha chain; flavodoxin/nitric oxide synthase 2708990 6878724 Lferr_2720 Acidithiobacillus ferrooxidans ATCC 53993 flavodoxin/nitric oxide synthase YP_002221119.1 2707224 D 380394 CDS YP_002221120.1 198284799 6878725 2708980..2710671 1 NC_011206.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mxa:MXAN_2334 sulfite reductase (NADPH) hemoprotein, beta-component; sulfite reductase 2710671 6878725 Lferr_2721 Acidithiobacillus ferrooxidans ATCC 53993 sulfite reductase YP_002221120.1 2708980 D 380394 CDS YP_002221121.1 198284800 6878726 2710679..2711416 1 NC_011206.1 KEGG: noc:Noc_2290 phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 2711416 6878726 Lferr_2722 Acidithiobacillus ferrooxidans ATCC 53993 adenylylsulfate reductase YP_002221121.1 2710679 D 380394 CDS YP_002221122.1 198284801 6878727 2711413..2712351 1 NC_011206.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2712351 6878727 Lferr_2723 Acidithiobacillus ferrooxidans ATCC 53993 sulfate adenylyltransferase subunit 2 YP_002221122.1 2711413 D 380394 CDS YP_002221123.1 198284802 6878728 2712351..2713703 1 NC_011206.1 KEGG: har:HEAR2396 ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase); TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit 2713703 6878728 Lferr_2724 Acidithiobacillus ferrooxidans ATCC 53993 sulfate adenylyltransferase large subunit YP_002221123.1 2712351 D 380394 CDS YP_002221124.1 198284803 6878729 2713809..2714630 1 NC_011206.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: hau:Haur_1744 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2714630 6878729 Lferr_2725 Acidithiobacillus ferrooxidans ATCC 53993 uroporphyrin-III C-methyltransferase YP_002221124.1 2713809 D 380394 CDS YP_002221125.1 198284804 6878730 2714627..2714980 1 NC_011206.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: aav:Aave_3165 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 2714980 6878730 Lferr_2726 Acidithiobacillus ferrooxidans ATCC 53993 cobalamin (vitamin B12) biosynthesis CbiX protein YP_002221125.1 2714627 D 380394 CDS YP_002221126.1 198284805 6878731 2715010..2715516 1 NC_011206.1 KEGG: syg:sync_0363 predicted redox protein; hypothetical protein 2715516 6878731 Lferr_2727 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221126.1 2715010 D 380394 CDS YP_002221127.1 198284806 6878732 complement(2715535..2716959) 1 NC_011206.1 PFAM: Chloride channel core; KEGG: rha:RHA1_ro05905 chloride channel transporter; chloride channel core protein 2716959 6878732 Lferr_2728 Acidithiobacillus ferrooxidans ATCC 53993 chloride channel core protein YP_002221127.1 2715535 R 380394 CDS YP_002221128.1 198284807 6878733 complement(2717413..2717661) 1 NC_011206.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: ppf:Pput_4890 twin argininte translocase protein A; twin-arginine translocation protein, TatA/E family subunit 2717661 6878733 Lferr_2729 Acidithiobacillus ferrooxidans ATCC 53993 twin-arginine translocation protein, TatA/E family subunit YP_002221128.1 2717413 R 380394 CDS YP_002221129.1 198284808 6878734 2718098..2718325 1 NC_011206.1 hypothetical protein 2718325 6878734 Lferr_2730 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221129.1 2718098 D 380394 CDS YP_002221130.1 198284809 6878735 complement(2718386..2719195) 1 NC_011206.1 KEGG: pin:Ping_1106 Sel1 domain and tetratricopeptide repeat-containing protein; hypothetical protein 2719195 6878735 Lferr_2731 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221130.1 2718386 R 380394 CDS YP_002221131.1 198284810 6878736 2719562..2719726 1 NC_011206.1 hypothetical protein 2719726 6878736 Lferr_2732 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221131.1 2719562 D 380394 CDS YP_002221132.1 198284811 6878737 2720066..2720470 1 NC_011206.1 hypothetical protein 2720470 6878737 Lferr_2733 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221132.1 2720066 D 380394 CDS YP_002221133.1 198284812 6878738 complement(2720673..2720822) 1 NC_011206.1 hypothetical protein 2720822 6878738 Lferr_2734 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221133.1 2720673 R 380394 CDS YP_002221134.1 198284813 6878739 2721519..2722793 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nmu:Nmul_A0008 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2722793 6878739 Lferr_2735 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002221134.1 2721519 D 380394 CDS YP_002221135.1 198284814 6878740 2722793..2723368 1 NC_011206.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mfa:Mfla_2202 response regulator receiver domain protein (CheY-like); two component Fis family transcriptional regulator 2723368 6878740 Lferr_2736 Acidithiobacillus ferrooxidans ATCC 53993 two component Fis family transcriptional regulator YP_002221135.1 2722793 D 380394 CDS YP_002221136.1 198284815 6878741 complement(2723427..2724068) 1 NC_011206.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: rso:RSc2814 hypothetical protein; 2OG-Fe(II) oxygenase 2724068 6878741 Lferr_2737 Acidithiobacillus ferrooxidans ATCC 53993 2OG-Fe(II) oxygenase YP_002221136.1 2723427 R 380394 CDS YP_002221137.1 198284816 6878742 complement(2724186..2724713) 1 NC_011206.1 hypothetical protein 2724713 6878742 Lferr_2738 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221137.1 2724186 R 380394 CDS YP_002221138.1 198284817 6878743 complement(2724827..2725267) 1 NC_011206.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tbd:Tbd_0336 hypothetical protein; BadM/Rrf2 family transcriptional regulator 2725267 6878743 Lferr_2739 Acidithiobacillus ferrooxidans ATCC 53993 BadM/Rrf2 family transcriptional regulator YP_002221138.1 2724827 R 380394 CDS YP_002221139.1 198284818 6878744 complement(2725282..2726475) 1 NC_011206.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psp:PSPPH_4562 major facilitator family transporter; major facilitator superfamily protein 2726475 6878744 Lferr_2740 Acidithiobacillus ferrooxidans ATCC 53993 major facilitator superfamily protein YP_002221139.1 2725282 R 380394 CDS YP_002221140.1 198284819 6878745 complement(2726495..2727439) 1 NC_011206.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: hch:HCH_00054 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 2727439 6878745 Lferr_2741 Acidithiobacillus ferrooxidans ATCC 53993 protoheme IX farnesyltransferase YP_002221140.1 2726495 R 380394 CDS YP_002221141.1 198284820 6878746 complement(2727455..2728408) 1 NC_011206.1 KEGG: pto:PTO1300 cytochrome c oxidase assembly factor; hypothetical protein 2728408 6878746 Lferr_2742 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221141.1 2727455 R 380394 CDS YP_002221142.1 198284821 6878747 complement(2728701..2729264) 1 NC_011206.1 TIGRFAM: rusticyanin; PFAM: blue (type 1) copper domain protein; KEGG: tac:Ta1505 rusticyanin related protein; rusticyanin 2729264 6878747 Lferr_2743 Acidithiobacillus ferrooxidans ATCC 53993 rusticyanin YP_002221142.1 2728701 R 380394 CDS YP_002221143.1 198284822 6878748 complement(2729393..2729533) 1 NC_011206.1 hypothetical protein 2729533 6878748 Lferr_2744 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221143.1 2729393 R 380394 CDS YP_002221144.1 198284823 6878749 complement(2729632..2729826) 1 NC_011206.1 hypothetical protein 2729826 6878749 Lferr_2745 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221144.1 2729632 R 380394 CDS YP_002221145.1 198284824 6878750 complement(2729867..2730421) 1 NC_011206.1 KEGG: cef:CE2085 putative cytochrome c oxidase subunit III; hypothetical protein 2730421 6878750 Lferr_2746 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221145.1 2729867 R 380394 CDS YP_002221146.1 198284825 6878751 complement(2730441..2732324) 1 NC_011206.1 PFAM: cytochrome c oxidase subunit I; KEGG: cya:CYA_1513 cytochrome c oxidase, subunit I; cytochrome-c oxidase 2732324 6878751 Lferr_2747 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome-c oxidase YP_002221146.1 2730441 R 380394 CDS YP_002221147.1 198284826 6878752 complement(2732381..2733145) 1 NC_011206.1 PFAM: cytochrome c oxidase subunit II; KEGG: scl:sce7592 putative cytochrome-c oxidase; cytochrome c oxidase subunit II 2733145 6878752 Lferr_2748 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c oxidase subunit II YP_002221147.1 2732381 R 380394 CDS YP_002221148.1 198284827 6878753 complement(2733160..2733711) 1 NC_011206.1 KEGG: hsl:OE2703F putative copper-containing oxidoreductase; hypothetical protein 2733711 6878753 Lferr_2749 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221148.1 2733160 R 380394 CDS YP_002221149.1 198284828 6878754 complement(2733813..2734505) 1 NC_011206.1 PFAM: cytochrome c class I; KEGG: bte:BTH_II1779 cytochrome c family protein; cytochrome c class I 2734505 6878754 Lferr_2750 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c class I YP_002221149.1 2733813 R 380394 CDS YP_002221150.1 198284829 6878755 complement(2734517..2735974) 1 NC_011206.1 KEGG: bte:BTH_II1778 cytochrome c; cytochrome c 2735974 6878755 Lferr_2751 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c YP_002221150.1 2734517 R 380394 CDS YP_002221151.1 198284830 6878757 complement(2737391..2738503) 1 NC_011206.1 hypothetical protein 2738503 6878757 Lferr_2753 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221151.1 2737391 R 380394 CDS YP_002221152.1 198284831 6878758 complement(2738646..2739548) 1 NC_011206.1 KEGG: acr:Acry_1563 cytochrome c-like protein; cytochrome c-like protein 2739548 6878758 Lferr_2754 Acidithiobacillus ferrooxidans ATCC 53993 cytochrome c-like protein YP_002221152.1 2738646 R 380394 CDS YP_002221153.1 198284832 6878759 complement(2739618..2741507) 1 NC_011206.1 PFAM: heat shock protein Hsp90; ATP-binding region ATPase domain protein; KEGG: tbd:Tbd_1078 heat shock protein 90; heat shock protein Hsp90 2741507 6878759 Lferr_2755 Acidithiobacillus ferrooxidans ATCC 53993 heat shock protein Hsp90 YP_002221153.1 2739618 R 380394 CDS YP_002221154.1 198284833 6878760 complement(2741695..2742162) 1 NC_011206.1 KEGG: tcx:Tcr_1933 uncharacterized conserved coiled coil protein; hypothetical protein 2742162 6878760 Lferr_2756 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221154.1 2741695 R 380394 CDS YP_002221155.1 198284834 6878761 complement(2742201..2743196) 1 NC_011206.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rca:Rcas_0709 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 2743196 6878761 Lferr_2757 Acidithiobacillus ferrooxidans ATCC 53993 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_002221155.1 2742201 R 380394 CDS YP_002221156.1 198284835 6878762 complement(2743901..2744386) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppd:Ppro_2351 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2744386 6878762 Lferr_2758 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002221156.1 2743901 R 380394 CDS YP_002221157.1 198284836 6878763 complement(2744489..2744809) 1 NC_011206.1 catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase 2744809 6878763 Lferr_2759 Acidithiobacillus ferrooxidans ATCC 53993 isochorismate-pyruvate lyase YP_002221157.1 2744489 R 380394 CDS YP_002221158.1 198284837 6878764 complement(2744840..2745487) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7226 ABC multidrug efflux pump, ATPase subunit; ABC transporter-like protein 2745487 6878764 Lferr_2760 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002221158.1 2744840 R 380394 CDS YP_002221159.1 198284838 6878765 complement(2745498..2746718) 1 NC_011206.1 KEGG: stp:Strop_0932 hypothetical protein; hypothetical protein 2746718 6878765 Lferr_2761 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221159.1 2745498 R 380394 CDS YP_002221160.1 198284839 6878766 complement(2746846..2747307) 1 NC_011206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_0419 GNAT family acetyltransferase; N-acetyltransferase GCN5 2747307 6878766 Lferr_2762 Acidithiobacillus ferrooxidans ATCC 53993 N-acetyltransferase GCN5 YP_002221160.1 2746846 R 380394 CDS YP_002221161.1 198284840 6878767 complement(2747397..2748053) 1 NC_011206.1 PFAM: Negative transcriptional regulator; KEGG: hau:Haur_4597 FMN-binding negative transcriptional regulator; FMN-binding negative transcriptional regulator 2748053 6878767 Lferr_2763 Acidithiobacillus ferrooxidans ATCC 53993 FMN-binding negative transcriptional regulator YP_002221161.1 2747397 R 380394 CDS YP_002221162.1 198284841 6878768 complement(2748067..2748714) 1 NC_011206.1 KEGG: rba:RB82 conserved hypothetical protein-putative cysteine protease; transglutaminase 2748714 6878768 Lferr_2764 Acidithiobacillus ferrooxidans ATCC 53993 transglutaminase YP_002221162.1 2748067 R 380394 CDS YP_002221163.1 198284842 6878769 complement(2748725..2749210) 1 NC_011206.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: jan:Jann_1696 cupin 2 protein; cupin 2749210 6878769 Lferr_2765 Acidithiobacillus ferrooxidans ATCC 53993 cupin YP_002221163.1 2748725 R 380394 CDS YP_002221164.1 198284843 6878770 complement(2749212..2749691) 1 NC_011206.1 KEGG: cvi:CV_1605 hypothetical protein; hypothetical protein 2749691 6878770 Lferr_2766 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221164.1 2749212 R 380394 CDS YP_002221165.1 198284844 6878771 complement(2749808..2750107) 1 NC_011206.1 KEGG: bam:Bamb_5132 short-chain dehydrogenase/reductase SDR; hypothetical protein 2750107 6878771 Lferr_2767 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221165.1 2749808 R 380394 CDS YP_002221166.1 198284845 6878772 complement(2750104..2750502) 1 NC_011206.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spu:584307 hypothetical LOC584307; Glyoxalase/bleomycin resistance protein/dioxygenase 2750502 6878772 Lferr_2768 Acidithiobacillus ferrooxidans ATCC 53993 Glyoxalase/bleomycin resistance protein/dioxygenase YP_002221166.1 2750104 R 380394 CDS YP_002221167.1 198284846 6878773 complement(2750742..2751167) 1 NC_011206.1 KEGG: mar:MAE_06990 hypothetical protein; hypothetical protein 2751167 6878773 Lferr_2769 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221167.1 2750742 R 380394 CDS YP_002221168.1 198284847 6878774 complement(2751157..2751417) 1 NC_011206.1 KEGG: vei:Veis_0541 hypothetical protein; hypothetical protein 2751417 6878774 Lferr_2770 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221168.1 2751157 R 380394 CDS YP_002221169.1 198284848 6878775 2751825..2752670 1 NC_011206.1 KEGG: maq:Maqu_1264 hypothetical protein; hypothetical protein 2752670 6878775 Lferr_2771 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221169.1 2751825 D 380394 CDS YP_002221170.1 198284849 6878776 complement(2753140..2753454) 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2753454 6878776 Lferr_2772 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002221170.1 2753140 R 380394 CDS YP_002221171.1 198284850 6878777 complement(2753576..2754895) 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2754895 6878777 Lferr_2773 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221171.1 2753576 R 380394 CDS YP_002221172.1 198284851 6878778 2755114..2755863 1 NC_011206.1 KEGG: nha:Nham_0140 hypothetical protein; hypothetical protein 2755863 6878778 Lferr_2774 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221172.1 2755114 D 380394 CDS YP_002221173.1 198284852 6878779 complement(2755868..2756695) 1 NC_011206.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p1B267 transposition helper protein; IstB domain-containing ATP-binding protein 2756695 6878779 Lferr_2775 Acidithiobacillus ferrooxidans ATCC 53993 IstB domain-containing ATP-binding protein YP_002221173.1 2755868 R 380394 CDS YP_002221174.1 198284853 6878780 complement(2756692..2758176) 1 NC_011206.1 PFAM: Integrase catalytic region; KEGG: eba:p2A256 transposase; integrase catalytic subunit 2758176 6878780 Lferr_2776 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002221174.1 2756692 R 380394 CDS YP_002221175.1 198284854 6878781 2758359..2758643 1 NC_011206.1 KEGG: nha:Nham_0140 hypothetical protein; hypothetical protein 2758643 6878781 Lferr_2777 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221175.1 2758359 D 380394 CDS YP_002221176.1 198284855 6878782 2759004..2759261 1 NC_011206.1 KEGG: ppf:Pput_1356 transposase, IS4 family protein; hypothetical protein 2759261 6878782 Lferr_2778 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221176.1 2759004 D 380394 CDS YP_002221177.1 198284856 6878784 complement(2760167..2761195) 1 NC_011206.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcm:Bcenmc03_2913 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2761195 6878784 Lferr_2781 Acidithiobacillus ferrooxidans ATCC 53993 transposase IS116/IS110/IS902 family protein YP_002221177.1 2760167 R 380394 CDS YP_002221178.1 198284857 6878788 complement(2763314..2764231) 1 NC_011206.1 PFAM: restriction endonuclease; KEGG: mar:MAE_48320 Mrr restriction system protein; restriction endonuclease 2764231 6878788 Lferr_2785 Acidithiobacillus ferrooxidans ATCC 53993 restriction endonuclease YP_002221178.1 2763314 R 380394 CDS YP_002221179.1 198284858 6878789 2764448..2764630 1 NC_011206.1 KEGG: bmu:Bmul_6239 integrase catalytic region; integrase catalytic subunit 2764630 6878789 Lferr_2786 Acidithiobacillus ferrooxidans ATCC 53993 integrase catalytic subunit YP_002221179.1 2764448 D 380394 CDS YP_002221180.1 198284859 6878790 2764687..2764959 1 NC_011206.1 KEGG: eba:ebA3777 transposase; hypothetical protein 2764959 6878790 Lferr_2787 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221180.1 2764687 D 380394 CDS YP_002221181.1 198284860 6878791 2765718..2767037 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2767037 6878791 Lferr_2788 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221181.1 2765718 D 380394 CDS YP_002221182.1 198284861 6878792 2767159..2767473 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2767473 6878792 Lferr_2789 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002221182.1 2767159 D 380394 CDS YP_002221183.1 198284862 6878793 2767617..2768027 1 NC_011206.1 hypothetical protein 2768027 6878793 Lferr_2790 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221183.1 2767617 D 380394 CDS YP_002221184.1 198284863 6878794 complement(2767974..2768837) 1 NC_011206.1 KEGG: maq:Maqu_4294 hypothetical protein; hypothetical protein 2768837 6878794 Lferr_2791 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221184.1 2767974 R 380394 CDS YP_002221185.1 198284864 6878795 2769446..2772172 1 NC_011206.1 PFAM: type III restriction protein res subunit; KEGG: tbd:Tbd_1492 type III restriction-modification enzyme helicase subunit; type III restriction protein res subunit 2772172 6878795 Lferr_2792 Acidithiobacillus ferrooxidans ATCC 53993 type III restriction protein res subunit YP_002221185.1 2769446 D 380394 CDS YP_002221186.1 198284865 6878796 2772175..2774430 1 NC_011206.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tbd:Tbd_1491 adenine specific DNA-methyltransferase; DNA methylase N-4/N-6 domain-containing protein 2774430 6878796 Lferr_2793 Acidithiobacillus ferrooxidans ATCC 53993 DNA methylase N-4/N-6 domain-containing protein YP_002221186.1 2772175 D 380394 CDS YP_002221187.1 198284866 6878797 2774483..2777167 1 NC_011206.1 KEGG: ade:Adeh_3230 hypothetical protein; hypothetical protein 2777167 6878797 Lferr_2794 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221187.1 2774483 D 380394 CDS YP_002221188.1 198284867 6878798 2777170..2778381 1 NC_011206.1 PFAM: AAA-4 family protein; KEGG: plu:plu4904 hypothetical protein; transcriptional regulator 2778381 6878798 Lferr_2795 Acidithiobacillus ferrooxidans ATCC 53993 transcriptional regulator YP_002221188.1 2777170 D 380394 CDS YP_002221189.1 198284868 6878799 complement(2778421..2779269) 1 NC_011206.1 hypothetical protein 2779269 6878799 Lferr_2796 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221189.1 2778421 R 380394 CDS YP_002221190.1 198284869 6878800 2779425..2780744 1 NC_011206.1 KEGG: sma:SAV256 transposase; hypothetical protein 2780744 6878800 Lferr_2797 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221190.1 2779425 D 380394 CDS YP_002221191.1 198284870 6878801 2780866..2781180 1 NC_011206.1 KEGG: fra:Francci3_2121 transposase, IS4; transposase, IS4 2781180 6878801 Lferr_2798 Acidithiobacillus ferrooxidans ATCC 53993 transposase, IS4 YP_002221191.1 2780866 D 380394 CDS YP_002221192.1 198284871 6878802 complement(2781316..2782125) 1 NC_011206.1 KEGG: hch:HCH_07063 hypothetical protein; hypothetical protein 2782125 6878802 Lferr_2799 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221192.1 2781316 R 380394 CDS YP_002221193.1 198284872 6878803 complement(2782127..2783956) 1 NC_011206.1 KEGG: ava:Ava_3495 Tn7-like transposition protein D; Tn7-like transposition protein D 2783956 6878803 Lferr_2800 Acidithiobacillus ferrooxidans ATCC 53993 Tn7-like transposition protein D YP_002221193.1 2782127 R 380394 CDS YP_002221194.1 198284873 6878804 complement(2783968..2785623) 1 NC_011206.1 KEGG: cth:Cthe_1115 Tn7-like transposition protein C; Tn7-like transposition protein C 2785623 6878804 Lferr_2801 Acidithiobacillus ferrooxidans ATCC 53993 Tn7-like transposition protein C YP_002221194.1 2783968 R 380394 CDS YP_002221195.1 198284874 6878805 complement(2785607..2787772) 1 NC_011206.1 KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding; HMG-I and HMG-Y DNA-binding protein 2787772 6878805 Lferr_2802 Acidithiobacillus ferrooxidans ATCC 53993 HMG-I and HMG-Y DNA-binding protein YP_002221195.1 2785607 R 380394 CDS YP_002221196.1 198284875 6878806 complement(2787769..2788635) 1 NC_011206.1 PFAM: TnsA endonuclease; KEGG: ava:Ava_3486 Tn7-like transposition protein A; TnsA endonuclease 2788635 6878806 Lferr_2803 Acidithiobacillus ferrooxidans ATCC 53993 TnsA endonuclease YP_002221196.1 2787769 R 380394 CDS YP_002221197.1 198284876 6878807 complement(2788779..2790614) 1 NC_011206.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: cvi:CV_0677 D-fructose-6-phosphate amidotransferase; glucosamine/fructose-6-phosphate aminotransferase 2790614 6878807 Lferr_2804 Acidithiobacillus ferrooxidans ATCC 53993 glucosamine/fructose-6-phosphate aminotransferase YP_002221197.1 2788779 R 380394 CDS YP_002221198.1 198284877 6878808 complement(2790660..2792027) 1 NC_011206.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; KEGG: vch:VC2762 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase 2792027 6878808 Lferr_2805 Acidithiobacillus ferrooxidans ATCC 53993 UDP-N-acetylglucosamine pyrophosphorylase YP_002221198.1 2790660 R 380394 CDS YP_002221199.1 198284878 6878809 complement(2792156..2792581) 1 NC_011206.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 2792581 atpC 6878809 atpC Acidithiobacillus ferrooxidans ATCC 53993 F0F1 ATP synthase subunit epsilon YP_002221199.1 2792156 R 380394 CDS YP_002221200.1 198284879 6878810 complement(2792585..2793994) 1 NC_011206.1 KEGG: noc:Noc_3074 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATP synthase F1 subunit beta 2793994 6878810 Lferr_2807 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F1 subunit beta YP_002221200.1 2792585 R 380394 CDS YP_002221201.1 198284880 6878811 complement(2794036..2794902) 1 NC_011206.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2794902 6878811 Lferr_2808 Acidithiobacillus ferrooxidans ATCC 53993 F0F1 ATP synthase subunit gamma YP_002221201.1 2794036 R 380394 CDS YP_002221202.1 198284881 6878812 complement(2794912..2796456) 1 NC_011206.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2796456 6878812 Lferr_2809 Acidithiobacillus ferrooxidans ATCC 53993 F0F1 ATP synthase subunit alpha YP_002221202.1 2794912 R 380394 CDS YP_002221203.1 198284882 6878813 complement(2796473..2797012) 1 NC_011206.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: cvi:CV_0669 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta 2797012 6878813 Lferr_2810 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F1 subunit delta YP_002221203.1 2796473 R 380394 CDS YP_002221204.1 198284883 6878814 complement(2797023..2797502) 1 NC_011206.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: tcx:Tcr_2169 ATP synthase F0, B subunit; ATP synthase F0 subunit B 2797502 6878814 Lferr_2811 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F0 subunit B YP_002221204.1 2797023 R 380394 CDS YP_002221205.1 198284884 6878815 complement(2797545..2797799) 1 NC_011206.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: tcx:Tcr_2170 ATP synthase F0, C subunit; ATP synthase F0 subunit C 2797799 6878815 Lferr_2812 Acidithiobacillus ferrooxidans ATCC 53993 ATP synthase F0 subunit C YP_002221205.1 2797545 R 380394 CDS YP_002221206.1 198284885 6878816 complement(2797841..2798590) 1 NC_011206.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: noc:Noc_3080 F0F1 ATP synthase subunit A; F0 ATP synthase subunit A 2798590 6878816 Lferr_2813 Acidithiobacillus ferrooxidans ATCC 53993 F0 ATP synthase subunit A YP_002221206.1 2797841 R 380394 CDS YP_002221207.1 198284886 6878817 complement(2798593..2798964) 1 NC_011206.1 hypothetical protein 2798964 6878817 Lferr_2814 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221207.1 2798593 R 380394 CDS YP_002221208.1 198284887 6878818 complement(2799019..2799903) 1 NC_011206.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dar:Daro_4106 ParB-like partition protein; parB-like partition protein 2799903 6878818 Lferr_2815 Acidithiobacillus ferrooxidans ATCC 53993 parB-like partition protein YP_002221208.1 2799019 R 380394 CDS YP_002221209.1 198284888 6878819 complement(2799900..2800682) 1 NC_011206.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mfa:Mfla_2753 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 2800682 6878819 Lferr_2816 Acidithiobacillus ferrooxidans ATCC 53993 cobyrinic acid ac-diamide synthase YP_002221209.1 2799900 R 380394 CDS YP_002221210.1 198284889 6878820 complement(2800729..2801394) 1 NC_011206.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mfa:Mfla_2754 methyltransferase GidB; methyltransferase GidB 2801394 6878820 Lferr_2817 Acidithiobacillus ferrooxidans ATCC 53993 methyltransferase GidB YP_002221210.1 2800729 R 380394 CDS YP_002221211.1 198284890 6878821 complement(2801399..2803273) 1 NC_011206.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2803273 6878821 Lferr_2818 Acidithiobacillus ferrooxidans ATCC 53993 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002221211.1 2801399 R 380394 CDS YP_002221212.1 198284891 6878822 complement(2803292..2803741) 1 NC_011206.1 KEGG: bbr:BB3302 lipoprotein; lipoprotein 2803741 6878822 Lferr_2819 Acidithiobacillus ferrooxidans ATCC 53993 lipoprotein YP_002221212.1 2803292 R 380394 CDS YP_002221213.1 198284892 6878823 complement(2803729..2804271) 1 NC_011206.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: aeh:Mlg_0662 methyltransferase type 12; type 12 methyltransferase 2804271 6878823 Lferr_2820 Acidithiobacillus ferrooxidans ATCC 53993 type 12 methyltransferase YP_002221213.1 2803729 R 380394 CDS YP_002221214.1 198284893 6878824 complement(2804278..2804820) 1 NC_011206.1 TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: acr:Acry_2805 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 2804820 6878824 Lferr_2821 Acidithiobacillus ferrooxidans ATCC 53993 molybdenum cofactor biosynthesis protein B YP_002221214.1 2804278 R 380394 CDS YP_002221215.1 198284894 6878825 2804969..2805904 1 NC_011206.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dge:Dgeo_2211 Mg2+ transporter protein, CorA-like protein; Mg2 transporter protein CorA family protein 2805904 6878825 Lferr_2822 Acidithiobacillus ferrooxidans ATCC 53993 Mg2 transporter protein CorA family protein YP_002221215.1 2804969 D 380394 CDS YP_002221216.1 198284895 6878826 2805935..2806876 1 NC_011206.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: gtn:GTNG_1415 magnesium and cobalt transport protein; Mg2 transporter protein CorA family protein 2806876 6878826 Lferr_2823 Acidithiobacillus ferrooxidans ATCC 53993 Mg2 transporter protein CorA family protein YP_002221216.1 2805935 D 380394 CDS YP_002221217.1 198284896 6878827 2806884..2807783 1 NC_011206.1 KEGG: fjo:Fjoh_0242 Mg2+ transporter protein, CorA family protein; hypothetical protein 2807783 6878827 Lferr_2824 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221217.1 2806884 D 380394 CDS YP_002221218.1 198284897 6878828 2807799..2808713 1 NC_011206.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: drm:Dred_2662 Mg2+ transporter protein, CorA family protein; Mg2 transporter protein CorA family protein 2808713 6878828 Lferr_2825 Acidithiobacillus ferrooxidans ATCC 53993 Mg2 transporter protein CorA family protein YP_002221218.1 2807799 D 380394 CDS YP_002221219.1 198284898 6878829 complement(2808794..2809864) 1 NC_011206.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: tcx:Tcr_1009 ADP-ribosylation/crystallin J1; ADP-ribosylation/Crystallin J1 2809864 6878829 Lferr_2826 Acidithiobacillus ferrooxidans ATCC 53993 ADP-ribosylation/Crystallin J1 YP_002221219.1 2808794 R 380394 CDS YP_002221220.1 198284899 6878830 2810255..2810707 1 NC_011206.1 TIGRFAM: flavoprotein WrbA; KEGG: aeh:Mlg_1277 flavoprotein WrbA; flavoprotein WrbA 2810707 6878830 Lferr_2827 Acidithiobacillus ferrooxidans ATCC 53993 flavoprotein WrbA YP_002221220.1 2810255 D 380394 CDS YP_002221221.1 198284900 6878831 2810711..2811583 1 NC_011206.1 PFAM: Pirin domain protein; KEGG: rfr:Rfer_0805 pirin-like; Pirin domain-containing protein 2811583 6878831 Lferr_2828 Acidithiobacillus ferrooxidans ATCC 53993 Pirin domain-containing protein YP_002221221.1 2810711 D 380394 CDS YP_002221222.1 198284901 6878832 2811641..2811793 1 NC_011206.1 hypothetical protein 2811793 6878832 Lferr_2829 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221222.1 2811641 D 380394 CDS YP_002221223.1 198284902 6878833 2811790..2812467 1 NC_011206.1 KEGG: mca:MCA0312 hypothetical protein; hypothetical protein 2812467 6878833 Lferr_2830 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221223.1 2811790 D 380394 CDS YP_002221224.1 198284903 6878835 2813217..2815523 1 NC_011206.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: acr:Acry_3609 TonB-dependent receptor; TonB-dependent receptor 2815523 6878835 Lferr_2832 Acidithiobacillus ferrooxidans ATCC 53993 TonB-dependent receptor YP_002221224.1 2813217 D 380394 CDS YP_002221225.1 198284904 6878836 2815609..2818404 1 NC_011206.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sus:Acid_4558 40-residue YVTN family beta-propeller repeat protein; SMP-30/gluconolaconase/LRE domain-containing protein 2818404 6878836 Lferr_2833 Acidithiobacillus ferrooxidans ATCC 53993 SMP-30/gluconolaconase/LRE domain-containing protein YP_002221225.1 2815609 D 380394 CDS YP_002221226.1 198284905 6878837 complement(2818551..2818766) 1 NC_011206.1 KEGG: reh:H16_A2469 phage integrase family protein; phage integrase family protein 2818766 6878837 Lferr_2834 Acidithiobacillus ferrooxidans ATCC 53993 phage integrase family protein YP_002221226.1 2818551 R 380394 CDS YP_002221227.1 198284906 6878839 complement(2819331..2819921) 1 NC_011206.1 hypothetical protein 2819921 6878839 Lferr_2835 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221227.1 2819331 R 380394 CDS YP_002221228.1 198284907 6878840 complement(2820016..2820792) 1 NC_011206.1 TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: mgm:Mmc1_3305 ABC-2 type transporter, NodJ family; NodJ family ABC transporter 2820792 6878840 Lferr_2836 Acidithiobacillus ferrooxidans ATCC 53993 NodJ family ABC transporter YP_002221228.1 2820016 R 380394 CDS YP_002221229.1 198284908 6878841 complement(2820792..2821721) 1 NC_011206.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0360 ABC transporter ATP-binding protein NodI; ABC transporter-like protein 2821721 6878841 Lferr_2837 Acidithiobacillus ferrooxidans ATCC 53993 ABC transporter-like protein YP_002221229.1 2820792 R 380394 CDS YP_002221230.1 198284909 6878842 complement(2821702..2822430) 1 NC_011206.1 KEGG: cbs:COXBURSA331_A1962 hypothetical protein; hypothetical protein 2822430 6878842 Lferr_2838 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221230.1 2821702 R 380394 CDS YP_002221231.1 198284910 6878843 complement(2822430..2822747) 1 NC_011206.1 KEGG: bpd:BURPS668_0436 ferredoxin, putative; ferredoxin 2822747 6878843 Lferr_2839 Acidithiobacillus ferrooxidans ATCC 53993 ferredoxin YP_002221231.1 2822430 R 380394 CDS YP_002221232.1 198284911 6878844 2822820..2823446 1 NC_011206.1 KEGG: azo:azo2762 ubiquinone biosynthesis protein; ubiquinone biosynthesis protein 2823446 6878844 Lferr_2840 Acidithiobacillus ferrooxidans ATCC 53993 ubiquinone biosynthesis protein YP_002221232.1 2822820 D 380394 CDS YP_002221233.1 198284912 6878845 complement(2823451..2823939) 1 NC_011206.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tbd:Tbd_0336 hypothetical protein; BadM/Rrf2 family transcriptional regulator 2823939 6878845 Lferr_2841 Acidithiobacillus ferrooxidans ATCC 53993 BadM/Rrf2 family transcriptional regulator YP_002221233.1 2823451 R 380394 CDS YP_002221234.1 198284913 6878846 complement(2823950..2824375) 1 NC_011206.1 PFAM: OsmC family protein; KEGG: cvi:CV_2756 hypothetical protein; OsmC family protein 2824375 6878846 Lferr_2842 Acidithiobacillus ferrooxidans ATCC 53993 OsmC family protein YP_002221234.1 2823950 R 380394 CDS YP_002221235.1 198284914 6878847 complement(2824446..2825237) 1 NC_011206.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: bmu:Bmul_2863 indole-3-glycerol-phosphate synthase; Indole-3-glycerol phosphate synthase 2825237 6878847 Lferr_2843 Acidithiobacillus ferrooxidans ATCC 53993 Indole-3-glycerol phosphate synthase YP_002221235.1 2824446 R 380394 CDS YP_002221236.1 198284915 6878848 complement(2825241..2826257) 1 NC_011206.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2826257 trpD 6878848 trpD Acidithiobacillus ferrooxidans ATCC 53993 anthranilate phosphoribosyltransferase YP_002221236.1 2825241 R 380394 CDS YP_002221237.1 198284916 6878849 complement(2826254..2826826) 1 NC_011206.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0014 panthranilate synthase component II (glutamine amido-transferase) protein; glutamine amidotransferase of anthranilate synthase 2826826 6878849 Lferr_2845 Acidithiobacillus ferrooxidans ATCC 53993 glutamine amidotransferase of anthranilate synthase YP_002221237.1 2826254 R 380394 CDS YP_002221238.1 198284917 6878850 complement(2826810..2828327) 1 NC_011206.1 KEGG: mca:MCA2584 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; anthranilate synthase component I 2828327 6878850 Lferr_2846 Acidithiobacillus ferrooxidans ATCC 53993 anthranilate synthase component I YP_002221238.1 2826810 R 380394 CDS YP_002221239.1 198284918 6878851 complement(2828438..2829121) 1 NC_011206.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tbd:Tbd_2229 phosphoglycolate phosphatase; phosphoglycolate phosphatase 2829121 6878851 Lferr_2847 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglycolate phosphatase YP_002221239.1 2828438 R 380394 CDS YP_002221240.1 198284919 6878852 complement(2829125..2829787) 1 NC_011206.1 PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: har:HEAR0202 ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E); ribulose-phosphate 3-epimerase 2829787 6878852 Lferr_2848 Acidithiobacillus ferrooxidans ATCC 53993 ribulose-phosphate 3-epimerase YP_002221240.1 2829125 R 380394 CDS YP_002221241.1 198284920 6878853 complement(2829852..2830922) 1 NC_011206.1 KEGG: noc:Noc_2804 fructose-1,6-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 2830922 6878853 Lferr_2849 Acidithiobacillus ferrooxidans ATCC 53993 fructose-bisphosphate aldolase YP_002221241.1 2829852 R 380394 CDS YP_002221242.1 198284921 6878854 complement(2831030..2832469) 1 NC_011206.1 KEGG: tbd:Tbd_0162 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2832469 6878854 Lferr_2850 Acidithiobacillus ferrooxidans ATCC 53993 pyruvate kinase YP_002221242.1 2831030 R 380394 CDS YP_002221243.1 198284922 6878855 complement(2832466..2833671) 1 NC_011206.1 PFAM: phosphoglycerate kinase; KEGG: abo:ABO_2613 phosphoglycerate kinase; phosphoglycerate kinase 2833671 6878855 Lferr_2851 Acidithiobacillus ferrooxidans ATCC 53993 phosphoglycerate kinase YP_002221243.1 2832466 R 380394 CDS YP_002221244.1 198284923 6878856 complement(2833686..2834702) 1 NC_011206.1 KEGG: bpt:Bpet3623 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2834702 6878856 Lferr_2852 Acidithiobacillus ferrooxidans ATCC 53993 glyceraldehyde-3-phosphate dehydrogenase YP_002221244.1 2833686 R 380394 CDS YP_002221245.1 198284924 6878857 complement(2834737..2836734) 1 NC_011206.1 KEGG: mca:MCA3040 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase 2836734 6878857 Lferr_2853 Acidithiobacillus ferrooxidans ATCC 53993 transketolase YP_002221245.1 2834737 R 380394 CDS YP_002221246.1 198284925 6878858 complement(2836760..2837704) 1 NC_011206.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2837704 glpX 6878858 glpX Acidithiobacillus ferrooxidans ATCC 53993 fructose 1,6-bisphosphatase II YP_002221246.1 2836760 R 380394 CDS YP_002221247.1 198284926 6878859 complement(2837763..2838590) 1 NC_011206.1 PFAM: inositol monophosphatase; KEGG: mca:MCA2471 inositol monophosphatase family protein; inositol-phosphate phosphatase 2838590 6878859 Lferr_2855 Acidithiobacillus ferrooxidans ATCC 53993 inositol-phosphate phosphatase YP_002221247.1 2837763 R 380394 CDS YP_002221248.1 198284927 6878860 complement(2838614..2839051) 1 NC_011206.1 KEGG: tbd:Tbd_2607 hypothetical protein; hypothetical protein 2839051 6878860 Lferr_2856 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221248.1 2838614 R 380394 CDS YP_002221249.1 198284928 6878861 2839119..2839844 1 NC_011206.1 PFAM: protein of unknown function DUF558; KEGG: aeh:Mlg_0361 protein of unknown function DUF558; hypothetical protein 2839844 6878861 Lferr_2857 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221249.1 2839119 D 380394 CDS YP_002221250.1 198284929 6878862 2839933..2840883 1 NC_011206.1 KEGG: aeh:Mlg_0854 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 2840883 6878862 Lferr_2858 Acidithiobacillus ferrooxidans ATCC 53993 hydroxymethylbutenyl pyrophosphate reductase YP_002221250.1 2839933 D 380394 CDS YP_002221251.1 198284930 6878863 complement(2840922..2842460) 1 NC_011206.1 PFAM: protein of unknown function DUF195; KEGG: dau:Daud_1920 protein of unknown function DUF195; hypothetical protein 2842460 6878863 Lferr_2859 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221251.1 2840922 R 380394 CDS YP_002221252.1 198284931 6878864 complement(2842489..2842944) 1 NC_011206.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: cte:CT1243 large conductance mechanosensitive channel; large conductance mechanosensitive channel protein 2842944 6878864 Lferr_2860 Acidithiobacillus ferrooxidans ATCC 53993 large conductance mechanosensitive channel protein YP_002221252.1 2842489 R 380394 CDS YP_002221253.1 198284932 6878865 complement(2843055..2843567) 1 NC_011206.1 hypothetical protein 2843567 6878865 Lferr_2861 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221253.1 2843055 R 380394 CDS YP_002221254.1 198284933 6878866 complement(2843601..2846711) 1 NC_011206.1 PFAM: acriflavin resistance protein; KEGG: gvi:glr4028 probable RND efflux transporter; acriflavin resistance protein 2846711 6878866 Lferr_2862 Acidithiobacillus ferrooxidans ATCC 53993 acriflavin resistance protein YP_002221254.1 2843601 R 380394 CDS YP_002221255.1 198284934 6878867 complement(2846708..2847838) 1 NC_011206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aav:Aave_2038 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2847838 6878867 Lferr_2863 Acidithiobacillus ferrooxidans ATCC 53993 RND family efflux transporter MFP subunit YP_002221255.1 2846708 R 380394 CDS YP_002221256.1 198284935 6878868 complement(2847835..2849265) 1 NC_011206.1 PFAM: outer membrane efflux protein; KEGG: ade:Adeh_2020 outer membrane efflux protein; outer membrane efflux protein 2849265 6878868 Lferr_2864 Acidithiobacillus ferrooxidans ATCC 53993 outer membrane efflux protein YP_002221256.1 2847835 R 380394 CDS YP_002221257.1 198284936 6878869 complement(2849915..2850358) 1 NC_011206.1 PFAM: protein of unknown function DUF188; KEGG: bpt:Bpet3884 hypothetical protein; hypothetical protein 2850358 6878869 Lferr_2865 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221257.1 2849915 R 380394 CDS YP_002221258.1 198284937 6878870 2850532..2850855 1 NC_011206.1 TIGRFAM: prevent-host-death family protein; KEGG: eba:ebB204 conserved hypothetical protein, antitoxin of prevent-host-death family; prevent-host-death family protein 2850855 6878870 Lferr_2866 Acidithiobacillus ferrooxidans ATCC 53993 prevent-host-death family protein YP_002221258.1 2850532 D 380394 CDS YP_002221259.1 198284938 6878871 2850862..2851293 1 NC_011206.1 KEGG: eba:ebA5967 nucleic acid-binding protein, contains PIN domain; nucleic acid-binding protein 2851293 6878871 Lferr_2867 Acidithiobacillus ferrooxidans ATCC 53993 nucleic acid-binding protein YP_002221259.1 2850862 D 380394 CDS YP_002221260.1 198284939 6878872 2851590..2853125 1 NC_011206.1 KEGG: mpn:MPN633 hypothetical protein; hypothetical protein 2853125 6878872 Lferr_2868 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221260.1 2851590 D 380394 CDS YP_002221261.1 198284940 6878874 complement(2854478..2854696) 1 NC_011206.1 KEGG: mca:MCA2829 hypothetical protein; hypothetical protein 2854696 6878874 Lferr_2870 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221261.1 2854478 R 380394 CDS YP_002221262.1 198284941 6878875 2855210..2855764 1 NC_011206.1 KEGG: pin:Ping_0892 envelope stress induced periplasmic protein, Spy-related; hypothetical protein 2855764 6878875 Lferr_2871 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221262.1 2855210 D 380394 CDS YP_002221263.1 198284942 6878876 2855765..2856502 1 NC_011206.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo1709 osmolarity response regulator; winged helix family two component transcriptional regulator 2856502 6878876 Lferr_2872 Acidithiobacillus ferrooxidans ATCC 53993 winged helix family two component transcriptional regulator YP_002221263.1 2855765 D 380394 CDS YP_002221264.1 198284943 6878877 2856508..2857770 1 NC_011206.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_0653 histidine kinase; integral membrane sensor signal transduction histidine kinase 2857770 6878877 Lferr_2873 Acidithiobacillus ferrooxidans ATCC 53993 integral membrane sensor signal transduction histidine kinase YP_002221264.1 2856508 D 380394 CDS YP_002221265.1 198284944 6878878 complement(2857782..2858108) 1 NC_011206.1 hypothetical protein 2858108 6878878 Lferr_2874 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221265.1 2857782 R 380394 CDS YP_002221266.1 198284945 6878879 2858252..2859640 1 NC_011206.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: noc:Noc_0501 argininosuccinate lyase; argininosuccinate lyase 2859640 6878879 Lferr_2875 Acidithiobacillus ferrooxidans ATCC 53993 argininosuccinate lyase YP_002221266.1 2858252 D 380394 CDS YP_002221267.1 198284946 6878880 2859637..2859822 1 NC_011206.1 KEGG: reu:Reut_A1107 hypothetical protein; hypothetical protein 2859822 6878880 Lferr_2876 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221267.1 2859637 D 380394 CDS YP_002221268.1 198284947 6878881 2859819..2861078 1 NC_011206.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: hch:HCH_00297 diaminopimelate decarboxylase; diaminopimelate decarboxylase 2861078 6878881 Lferr_2877 Acidithiobacillus ferrooxidans ATCC 53993 diaminopimelate decarboxylase YP_002221268.1 2859819 D 380394 CDS YP_002221269.1 198284948 6878882 2861220..2861771 1 NC_011206.1 KEGG: aae:aq_1250 hypothetical protein; phospholipid-binding protein-like protein 2861771 6878882 Lferr_2878 Acidithiobacillus ferrooxidans ATCC 53993 phospholipid-binding protein-like protein YP_002221269.1 2861220 D 380394 CDS YP_002221270.1 198284949 6878883 2861803..2862279 1 NC_011206.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: tbd:Tbd_1380 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 2862279 6878883 Lferr_2879 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase maturation protease YP_002221270.1 2861803 D 380394 CDS YP_002221271.1 198284950 6878884 2862266..2862682 1 NC_011206.1 PFAM: HupH hydrogenase expression protein; KEGG: tbd:Tbd_1379 hypothetical protein; HupH hydrogenase expression protein 2862682 6878884 Lferr_2880 Acidithiobacillus ferrooxidans ATCC 53993 HupH hydrogenase expression protein YP_002221271.1 2862266 D 380394 CDS YP_002221272.1 198284951 6878885 2862682..2863782 1 NC_011206.1 KEGG: tbd:Tbd_1378 Ni-Fe hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 2863782 6878885 Lferr_2881 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase (NiFe) small subunit HydA YP_002221272.1 2862682 D 380394 CDS YP_002221273.1 198284952 6878886 2863772..2864437 1 NC_011206.1 KEGG: tbd:Tbd_1377 hypothetical protein; hypothetical protein 2864437 6878886 Lferr_2882 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221273.1 2863772 D 380394 CDS YP_002221274.1 198284953 6878887 2864434..2865795 1 NC_011206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pol:Bpro_1188 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 2865795 6878887 Lferr_2883 Acidithiobacillus ferrooxidans ATCC 53993 hypothetical protein YP_002221274.1 2864434 D 380394 CDS YP_002221275.1 198284954 6878888 2865799..2867556 1 NC_011206.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: tbd:Tbd_1375 Ni-Fe hydrogenase large chain; nickel-dependent hydrogenase large subunit 2867556 6878888 Lferr_2884 Acidithiobacillus ferrooxidans ATCC 53993 nickel-dependent hydrogenase large subunit YP_002221275.1 2865799 D 380394 CDS YP_002221276.1 198284955 6878889 2867625..2867966 1 NC_011206.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: aeh:Mlg_2019 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 2867966 6878889 Lferr_2885 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase nickel incorporation protein HypA YP_002221276.1 2867625 D 380394 CDS YP_002221277.1 198284956 6878890 2867963..2868766 1 NC_011206.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: aeh:Mlg_2018 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 2868766 6878890 Lferr_2886 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase nickel incorporation protein HypB YP_002221277.1 2867963 D 380394 CDS YP_002221278.1 198284957 6878891 2868781..2869026 1 NC_011206.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: bvi:Bcep1808_5944 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2869026 6878891 Lferr_2887 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase assembly chaperone HypC/HupF YP_002221278.1 2868781 D 380394 CDS YP_002221279.1 198284958 6878892 2869023..2870135 1 NC_011206.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rme:Rmet_1539 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2870135 6878892 Lferr_2888 Acidithiobacillus ferrooxidans ATCC 53993 hydrogenase expression/formation protein HypD YP_002221279.1 2869023 D 380394 CDS YP_002221280.1 198284959 6878893 2870325..2871209 1 NC_011206.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pae:PA5454 oxidoreductase Rmd; NAD-dependent epimerase/dehydratase 2871209 6878893 Lferr_2889 Acidithiobacillus ferrooxidans ATCC 53993 NAD-dependent epimerase/dehydratase YP_002221280.1 2870325 D 380394 CDS YP_002221281.1 198284960 6878894 2871206..2872237 1 NC_011206.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: aae:aq_1082 GDP-D-mannose dehydratase; GDP-mannose 4,6-dehydratase 2872237 6878894 Lferr_2890 Acidithiobacillus ferrooxidans ATCC 53993 GDP-mannose 4,6-dehydratase YP_002221281.1 2871206 D 380394 CDS YP_002221282.1 198284961 6878895 2872234..2873673 1 NC_011206.1 KEGG: pap:PSPA7_3009 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2873673 6878895 Lferr_2891 Acidithiobacillus ferrooxidans ATCC 53993 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002221282.1 2872234 D 380394 CDS YP_002221283.1 198284962 6878896 complement(2873705..2874253) 1 NC_011206.1 KEGG: eba:ebA2275 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2874253 6878896 Lferr_2892 Acidithiobacillus ferrooxidans ATCC 53993 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002221283.1 2873705 R 380394 CDS YP_002221284.1 198284963 6878897 complement(2874250..2875134) 1 NC_011206.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ajs:Ajs_0539 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2875134 6878897 Lferr_2893 Acidithiobacillus ferrooxidans ATCC 53993 glucose-1-phosphate thymidylyltransferase YP_002221284.1 2874250 R 380394 CDS YP_002221285.1 198284964 6878898 2875332..2876708 1 NC_011206.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mhu:Mhun_1633 general substrate transporter; general substrate transporter 2876708 6878898 Lferr_2894 Acidithiobacillus ferrooxidans ATCC 53993 general substrate transporter YP_002221285.1 2875332 D 380394 CDS YP_002221286.1 198284965 6878899 complement(2876722..2877432) 1 NC_011206.1 TIGRFAM: TonB family protein; KEGG: bbr:BB4396 hypothetical protein; TonB family protein 2877432 6878899 Lferr_2895 Acidithiobacillus ferrooxidans ATCC 53993 TonB family protein YP_002221286.1 2876722 R 380394 CDS YP_002221287.1 198284966 6878900 complement(2877383..2878375) 1 NC_011206.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2878375 6878900 Lferr_2896 Acidithiobacillus ferrooxidans ATCC 53993 delta-aminolevulinic acid dehydratase YP_002221287.1 2877383 R 380394 CDS YP_002221288.1 198284967 6878901 complement(2878443..2879231) 1 NC_011206.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: dar:Daro_3673 uroporphyrinogen III synthase HEM4; uroporphyrinogen-III synthase 2879231 6878901 Lferr_2897 Acidithiobacillus ferrooxidans ATCC 53993 uroporphyrinogen-III synthase YP_002221288.1 2878443 R 380394 CDS YP_002221289.1 198284968 6878902 complement(2879228..2880148) 1 NC_011206.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2880148 hemC 6878902 hemC Acidithiobacillus ferrooxidans ATCC 53993 porphobilinogen deaminase YP_002221289.1 2879228 R 380394 CDS YP_002221290.1 198284969 6878903 complement(2880194..2880526) 1 NC_011206.1 KEGG: rba:RB11961 probable comEA-related protein; ComEA-like protein 2880526 6878903 Lferr_2899 Acidithiobacillus ferrooxidans ATCC 53993 ComEA-like protein YP_002221290.1 2880194 R 380394 CDS YP_002221291.1 198284970 6878904 complement(2880564..2880959) 1 NC_011206.1 PFAM: histidine triad (HIT) protein; KEGG: fjo:Fjoh_1591 histidine triad (HIT) protein; histidine triad (HIT) protein 2880959 6878904 Lferr_2900 Acidithiobacillus ferrooxidans ATCC 53993 histidine triad (HIT) protein YP_002221291.1 2880564 R 380394 CDS YP_002221292.1 198284971 6878905 complement(2880956..2882248) 1 NC_011206.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2882248 6878905 Lferr_2901 Acidithiobacillus ferrooxidans ATCC 53993 glutamate-1-semialdehyde aminotransferase YP_002221292.1 2880956 R 380394 CDS YP_002221293.1 198284972 6878906 complement(2882251..2882904) 1 NC_011206.1 KEGG: aeh:Mlg_2067 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2882904 6878906 Lferr_2902 Acidithiobacillus ferrooxidans ATCC 53993 thiamine-phosphate pyrophosphorylase YP_002221293.1 2882251 R 380394 CDS YP_002221294.1 198284973 6878907 complement(2882891..2883724) 1 NC_011206.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mfa:Mfla_2662 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 2883724 6878907 Lferr_2903 Acidithiobacillus ferrooxidans ATCC 53993 phosphomethylpyrimidine kinase YP_002221294.1 2882891 R 380394 CDS YP_002221295.1 198284974 6878908 complement(2884020..2884805) 1 NC_011206.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dar:Daro_3863 short chain dehydrogenase; short chain dehydrogenase 2884805 6878908 Lferr_2904 Acidithiobacillus ferrooxidans ATCC 53993 short chain dehydrogenase YP_002221295.1 2884020 R 380394 CDS